209 182 0 0 chr18 296 329 -86677219 + (TG)n Simple_repeat Simple_repeat 2 34 0 274 103 0 0 chr18 332 371 -86677177 - AluJo SINE Alu -20 282 244 908 167 7 0 chr18 371 515 -86677033 - AluJo SINE Alu -167 145 1 28 48 0 0 chr18 1281 1323 -86676225 + AT_rich Low_complexity Low_complexity 1 42 0 1988 130 0 23 chr18 2237 2544 -86675004 - AluSx SINE Alu -12 300 1 1853 156 0 7 chr18 3292 3587 -86673961 + AluSx SINE Alu 1 293 -19 1645 154 4 0 chr18 4503 4756 -86672792 - AluSx SINE Alu -1 311 58 2234 117 0 0 chr18 4756 5055 -86672493 - AluSx SINE Alu -13 299 1 1108 140 0 6 chr18 5074 5245 -86672303 + AluJb SINE Alu 130 299 -13 2030 112 14 14 chr18 5807 6102 -86671446 - AluSx SINE Alu -17 295 1 269 314 177 0 chr18 6248 6372 -86671176 - MIR3 SINE MIR -15 193 48 1684 177 16 29 chr18 6499 7005 -86670543 - L1MA9 LINE L1 -6 6306 5817 180 0 0 0 chr18 7005 7025 -86670523 + (TTA)n Simple_repeat Simple_repeat 2 21 0 855 126 8 0 chr18 7025 7144 -86670404 - FLAM_C SINE Alu -23 120 1 871 174 2 7 chr18 7144 7309 -86670239 - L1MD2 LINE L1 -356 5824 5659 2235 112 0 7 chr18 7636 7932 -86669616 - AluSx SINE Alu -18 294 1 413 179 57 57 chr18 8578 8684 -86668864 - MER74A LTR ERVL 0 558 453 699 175 11 11 chr18 8700 8880 -86668668 - L1MB4 LINE L1 -72 6108 5818 2359 97 0 0 chr18 8881 9179 -86668369 - AluSq SINE Alu -15 298 1 225 59 0 0 chr18 9307 9341 -86668207 - L1ME3 LINE L1 0 6162 6129 583 289 51 25 chr18 9343 9540 -86668008 + MIR SINE MIR 41 242 -20 755 248 135 9 chr18 9643 9873 -86667675 + MER112 DNA MER1_type 1 259 -1 256 296 0 83 chr18 9876 9984 -86667564 - MIR SINE MIR -56 152 54 868 134 92 0 chr18 9994 10136 -86667412 - L1MB7 LINE L1 -18 6166 6012 2052 132 3 0 chr18 11117 11405 -86666143 - AluSx SINE Alu -16 296 8 892 133 0 0 chr18 11406 11541 -86666007 - AluJb SINE Alu -177 135 1 2110 117 0 4 chr18 11666 11947 -86665601 - AluSg SINE Alu -30 280 1 2183 103 7 0 chr18 11977 12277 -86665271 + AluSp SINE Alu 2 303 -10 2327 84 0 13 chr18 12429 12727 -86664821 + AluY SINE Alu 1 294 -17 419 242 201 0 chr18 13390 13539 -86664009 + MIR SINE MIR 70 248 -14 2242 105 3 3 chr18 13771 14077 -86663471 - AluSx SINE Alu -6 306 1 275 186 93 106 chr18 14630 14791 -86662757 + MER117 DNA MER1_type 1 159 -38 305 236 146 0 chr18 15035 15158 -86662390 - LTR67 LTR ERVL -6 551 411 2097 103 3 28 chr18 15969 16296 -86661252 - AluSx SINE Alu 0 320 1 24 0 0 0 chr18 17168 17192 -86660356 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr18 17467 17493 -86660055 + AT_rich Low_complexity Low_complexity 1 26 0 739 164 9 0 chr18 17498 17614 -86659934 - AluJb SINE Alu -194 118 2 439 262 37 63 chr18 18939 19130 -86658418 - L2 LINE L2 -4 3309 3124 597 226 45 13 chr18 19143 19298 -86658250 - MER117 DNA MER1_type -34 163 4 207 0 0 0 chr18 19424 19447 -86658101 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1801 140 7 7 chr18 19455 19733 -86657815 - AluSx SINE Alu -32 280 3 1249 186 139 27 chr18 19775 20070 -86657478 - MLT2C1 LTR ERVL -61 336 9 21006 178 36 15 chr18 20074 24046 -86653502 - ERVL LTR ERVL -9 5755 1672 1262 91 0 12 chr18 24050 24243 -86653305 - AluSq SINE Alu 0 313 129 480 133 13 0 chr18 24254 24329 -86653219 + MLT2A2 LTR ERVL 196 271 -182 1094 90 0 0 chr18 24330 24464 -86653084 - AluSq SINE Alu -178 134 1 837 285 50 0 chr18 24494 24715 -86652833 - ERVL LTR ERVL -4107 1657 1426 383 172 0 0 chr18 24717 24775 -86652773 - MER7A DNA MER2_type 0 336 279 444 293 0 30 chr18 24786 24919 -86652629 - ERVL LTR ERVL -4342 1422 1294 2113 157 63 32 chr18 24919 25458 -86652090 + MLT2A2 LTR ERVL 1 554 0 329 229 64 9 chr18 25458 25567 -86651981 - ERVL LTR ERVL -4395 1259 1145 645 231 33 1 chr18 25629 25763 -86651785 - MLT2B1 LTR ERVL -20 534 342 824 193 64 12 chr18 25763 25934 -86651614 - ERVL LTR ERVL -4590 1174 995 1779 243 18 4 chr18 25939 26407 -86651141 - ERVL LTR ERVL -4901 863 317 1870 191 146 30 chr18 26407 26452 -86651096 - MLT2B1 LTR ERVL 0 520 482 2226 143 3 55 chr18 26452 26700 -86650848 - MER7A DNA MER2_type -2692 346 123 2218 137 0 0 chr18 26700 27006 -86650542 + AluSx SINE Alu 1 306 -6 2226 143 3 55 chr18 27006 27122 -86650426 - MER7A DNA MER2_type -2915 123 3 1870 191 146 30 chr18 27122 27136 -86650412 - MLT2B1 LTR ERVL -38 482 471 186 43 0 0 chr18 27136 27159 -86650389 + (GA)n Simple_repeat Simple_repeat 2 24 0 1870 191 146 30 chr18 27159 27564 -86649984 - MLT2B1 LTR ERVL -49 471 1 2318 92 0 0 chr18 27564 27857 -86649691 + AluY SINE Alu 1 293 -18 385 300 183 12 chr18 27870 28127 -86649421 - ERVL LTR ERVL -5353 321 1 228 182 0 0 chr18 28140 28184 -86649364 - ERVL LTR ERVL -9 511 468 183 156 0 0 chr18 28195 28227 -86649321 + (CATA)n Simple_repeat Simple_repeat 3 34 0 1881 178 38 22 chr18 28228 28599 -86648949 - MLT2C1 LTR ERVL -20 377 1 32 26 0 0 chr18 28712 28751 -86648797 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr18 28788 28811 -86648737 + AT_rich Low_complexity Low_complexity 1 23 0 1708 156 12 47 chr18 29599 29920 -86647628 - AluJb SINE Alu -1 311 2 395 263 150 23 chr18 30820 30953 -86646595 + MIR SINE MIR 46 195 -67 11125 81 21 25 chr18 31095 32636 -86644912 + MER41A-int LTR ERV1 4411 5944 -2 3517 72 29 0 chr18 32636 33092 -86644456 + MER41A LTR ERV1 1 469 -85 2282 95 3 7 chr18 33141 33437 -86644111 - AluSq SINE Alu -18 295 1 772 127 68 8 chr18 33449 33567 -86643981 - FLAM_C SINE Alu -8 125 1 603 237 30 7 chr18 33588 33723 -86643825 - MER5B DNA MER1_type 0 178 41 2091 118 0 0 chr18 33941 34244 -86643304 + AluSg SINE Alu 1 303 0 21 71 0 0 chr18 34320 34362 -86643186 + AT_rich Low_complexity Low_complexity 1 42 0 334 209 91 27 chr18 34435 34642 -86642906 - MLT1H LTR MaLR -168 374 152 2506 184 99 52 chr18 34648 35021 -86642527 - L1MB7 LINE L1 -14 6170 5816 2188 104 3 7 chr18 35021 35348 -86642200 - AluSp SINE Alu 0 313 1 2506 184 99 52 chr18 35348 35433 -86642115 - L1MB7 LINE L1 -368 5816 5736 1906 131 3 24 chr18 35433 35745 -86641803 + AluSx SINE Alu 1 306 0 2506 184 99 52 chr18 35745 35921 -86641627 - L1MB7 LINE L1 -448 5736 5504 249 139 0 0 chr18 36012 36048 -86641500 + MADE1 DNA Mariner 5 40 -40 303 0 47 47 chr18 36119 36162 -86641386 - MADE1 DNA Mariner -39 41 5 356 289 25 0 chr18 36165 36286 -86641262 - L1MC5 LINE L1 -527 7434 7311 346 331 28 7 chr18 36291 36436 -86641112 - L1MC4a LINE L1 -462 7346 7199 837 152 0 0 chr18 36556 36681 -86640867 + FRAM SINE Alu 21 145 -31 27 0 0 0 chr18 36681 36708 -86640840 + AT_rich Low_complexity Low_complexity 1 27 0 2221 92 10 3 chr18 36820 37112 -86640436 + AluSq SINE Alu 1 294 -19 369 0 0 0 chr18 37510 37551 -86639997 + (CA)n Simple_repeat Simple_repeat 2 42 0 2028 150 0 0 chr18 37572 37879 -86639669 + AluSq SINE Alu 5 311 -2 193 316 45 45 chr18 38027 38160 -86639388 + L2 LINE L2 1855 1987 -1327 241 297 0 14 chr18 38270 38344 -86639204 + MER5B DNA MER1_type 74 146 -32 1962 139 31 0 chr18 38345 38633 -86638915 - AluSx SINE Alu -15 297 1 1411 31 6 0 chr18 38650 38813 -86638735 - L1PA2 LINE L1 0 6155 5992 220 259 52 0 chr18 38816 38859 -86638689 + MER5B DNA MER1_type 1 49 -129 2034 77 91 17 chr18 38859 39146 -86638402 + AluSg SINE Alu 1 308 -2 220 259 52 0 chr18 39146 39160 -86638388 + MER5B DNA MER1_type 49 61 -117 2196 107 7 0 chr18 39453 39744 -86637804 + AluSx SINE Alu 2 294 -18 185 221 116 70 chr18 39823 39909 -86637639 - MIR SINE MIR -12 250 161 1546 164 23 59 chr18 40221 40526 -86637022 + AluJo SINE Alu 1 294 -18 21 36 0 0 chr18 41267 41295 -86636253 + AT_rich Low_complexity Low_complexity 1 28 0 2078 133 7 0 chr18 41474 41768 -86635780 + AluSx SINE Alu 1 296 -16 289 294 28 92 chr18 42585 42694 -86634854 + L2 LINE L2 3158 3259 -13 189 0 0 0 chr18 42694 42715 -86634833 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 185 373 0 0 chr18 42715 42782 -86634766 - MIR SINE MIR -90 118 52 2372 90 0 0 chr18 42793 43082 -86634466 - AluSg SINE Alu -21 289 1 549 183 29 0 chr18 43191 43295 -86634253 - MLT2B1 LTR ERVL -14 506 400 2425 70 10 10 chr18 43405 43717 -86633831 - AluSx SINE Alu 0 312 1 2193 122 0 0 chr18 43747 44042 -86633506 + AluSx SINE Alu 1 295 -17 29 28 0 0 chr18 44771 44807 -86632741 + AT_rich Low_complexity Low_complexity 1 36 0 1889 135 7 30 chr18 44961 45258 -86632290 + AluSx SINE Alu 6 295 -17 1845 170 0 19 chr18 45624 45935 -86631613 + AluJo SINE Alu 6 310 -2 1967 139 16 3 chr18 46097 46406 -86631142 + AluSq SINE Alu 1 313 0 2200 113 0 0 chr18 46413 46697 -86630851 + AluSq SINE Alu 1 284 -29 22 0 0 0 chr18 47014 47036 -86630512 + AT_rich Low_complexity Low_complexity 1 22 0 1908 128 30 27 chr18 47287 47585 -86629963 + AluSx SINE Alu 1 299 -13 2229 135 47 39 chr18 47588 47972 -86629576 + MSTC LTR MaLR 42 428 0 213 302 47 12 chr18 48088 48174 -86629374 + L2 LINE L2 2562 2650 -664 2279 97 3 3 chr18 48323 48623 -86628925 + AluSq SINE Alu 1 300 -13 382 350 133 44 chr18 48662 48979 -86628569 + L2 LINE L2 2913 3257 -15 493 286 79 21 chr18 48998 49187 -86628361 + MIR SINE MIR 26 225 -37 23 0 0 0 chr18 49904 49927 -86627621 + AT_rich Low_complexity Low_complexity 1 23 0 1783 137 49 0 chr18 50055 50318 -86627230 - AluSx SINE Alu -36 276 1 21 0 0 0 chr18 50415 50436 -86627112 + AT_rich Low_complexity Low_complexity 1 21 0 758 159 16 8 chr18 50448 50574 -86626974 + FLAM_A SINE Alu 10 136 -6 198 0 0 0 chr18 50727 50749 -86626799 + (CA)n Simple_repeat Simple_repeat 2 23 0 2230 115 10 0 chr18 50946 51250 -86626298 - AluSq SINE Alu -6 307 1 22 0 0 0 chr18 51567 51589 -86625959 + AT_rich Low_complexity Low_complexity 1 22 0 624 227 12 49 chr18 51595 51758 -86625790 - MIR SINE MIR -47 215 59 1804 187 48 50 chr18 51789 52296 -86625252 - MLT1D LTR MaLR -1 548 1 241 79 26 0 chr18 52415 52453 -86625095 - MER30B DNA MER1_type -5 185 147 1552 172 37 10 chr18 53033 53330 -86624218 - AluJo SINE Alu -3 309 5 419 263 62 91 chr18 54216 54425 -86623123 + MIR SINE MIR 14 216 -46 2092 130 3 13 chr18 54624 54939 -86622609 - AluSx SINE Alu 0 312 1 289 253 67 0 chr18 55791 55866 -86621682 - L2 LINE L2 0 3313 3234 576 224 62 5 chr18 55893 56085 -86621463 + L1ME3A LINE L1 5262 5464 -700 1224 114 0 0 chr18 56098 56265 -86621283 + AluSg/x SINE Alu 127 293 -17 1217 227 161 35 chr18 56265 56647 -86620901 + L1ME3A LINE L1 5481 5813 -357 1922 172 0 7 chr18 56647 56949 -86620599 - AluJb SINE Alu -12 300 1 1217 227 161 35 chr18 56949 57169 -86620379 + L1ME3A LINE L1 5813 6159 -11 904 220 54 45 chr18 57257 57480 -86620068 - MIR SINE MIR -34 228 4 2474 246 115 23 chr18 57486 58332 -86619216 - L2 LINE L2 -383 2931 2001 2247 100 0 3 chr18 58332 58631 -86618917 + AluSg SINE Alu 1 298 -12 2474 246 115 23 chr18 58631 58654 -86618894 - L2 LINE L2 -1313 2001 1982 2396 93 3 3 chr18 59731 60033 -86617515 + AluSx SINE Alu 1 302 -10 2168 109 3 3 chr18 60134 60427 -86617121 + AluSp SINE Alu 1 293 -20 1486 168 78 4 chr18 60636 60904 -86616644 + AluJb SINE Alu 1 288 -24 2150 130 0 7 chr18 61083 61382 -86616166 - AluSq SINE Alu -16 297 1 523 240 56 46 chr18 61445 61641 -86615907 - AluSg/x SINE Alu -16 296 99 397 304 69 46 chr18 61681 61941 -86615607 + L1MEc LINE L1 100 365 -6031 1833 231 68 42 chr18 62140 62204 -86615344 + L1M4 LINE L1 3556 3617 -2529 2116 91 0 36 chr18 62204 62511 -86615037 + AluSg SINE Alu 1 296 -14 1833 231 68 42 chr18 62511 63202 -86614346 + L1M4 LINE L1 3617 4330 -1816 2329 79 0 3 chr18 63480 63771 -86613777 - AluSq SINE Alu -23 290 1 403 324 64 12 chr18 63805 63978 -86613570 + MIR3 SINE MIR 18 199 -9 1529 172 0 44 chr18 63984 64280 -86613268 + AluJo SINE Alu 25 307 -5 714 217 6 11 chr18 64974 65154 -86612394 + L1MC4 LINE L1 7490 7668 -374 1967 143 0 0 chr18 65551 65844 -86611704 - AluSx SINE Alu -19 293 1 1289 165 23 5 chr18 65881 66099 -86611449 - AluJb SINE Alu -2 310 89 1540 179 33 4 chr18 66168 66488 -86611060 + AluJb SINE Alu 1 328 0 807 123 0 36 chr18 66983 67121 -86610427 + FLAM_C SINE Alu 1 133 0 2066 146 0 0 chr18 68272 68566 -86608982 + AluSg SINE Alu 1 294 -16 25 31 0 0 chr18 68707 68739 -86608809 + AT_rich Low_complexity Low_complexity 1 32 0 343 304 9 26 chr18 68800 68915 -86608633 - MIR SINE MIR -137 125 13 1642 130 11 19 chr18 69068 69337 -86608211 - AluSx SINE Alu -44 268 2 825 157 85 20 chr18 69352 69505 -86608043 - FRAM SINE Alu -10 166 4 1153 168 141 38 chr18 70283 70444 -86607104 - AluJb SINE Alu -13 289 146 2398 89 0 10 chr18 70444 70757 -86606791 - AluSg SINE Alu 0 310 1 1153 168 141 38 chr18 70757 70857 -86606691 - AluJb SINE Alu -156 146 1 413 235 96 9 chr18 71246 71361 -86606187 + L2 LINE L2 3188 3312 -1 1019 155 92 0 chr18 71707 71881 -86605667 - AluSg/x SINE Alu 0 312 123 21 0 0 0 chr18 71890 71911 -86605637 + AT_rich Low_complexity Low_complexity 1 21 0 2003 120 25 0 chr18 71911 72194 -86605354 - AluSx SINE Alu -22 290 1 23 0 0 0 chr18 72712 72735 -86604813 + AT_rich Low_complexity Low_complexity 1 23 0 240 308 113 8 chr18 72752 72885 -86604663 - LTR33 LTR ERVL -76 445 299 2062 99 11 0 chr18 73775 74048 -86603500 - AluSx SINE Alu -16 296 21 2443 64 3 0 chr18 74105 74400 -86603148 - AluY SINE Alu -15 296 1 1972 129 4 4 chr18 74431 74711 -86602837 + AluJb SINE Alu 1 280 -32 2421 32 0 3 chr18 75290 75607 -86601941 + AluY SINE Alu 1 316 0 2602 43 0 0 chr18 76844 77145 -86600403 + AluY SINE Alu 1 301 -10 191 337 116 21 chr18 79048 79143 -86598405 + MIR SINE MIR 32 135 -73 1868 158 3 32 chr18 79402 79713 -86597835 - AluJb SINE Alu -10 302 1 344 341 94 34 chr18 79723 80148 -86597400 + L2 LINE L2 2599 3051 -221 762 145 0 22 chr18 80363 80501 -86597047 - L1PB3 LINE L1 -3 6151 6017 668 201 7 7 chr18 80619 80763 -86596785 - L1PA16 LINE L1 -1 6165 6022 2375 93 3 0 chr18 80788 81089 -86596459 - AluSp SINE Alu -11 302 1 1029 106 0 0 chr18 81091 81223 -86596325 - AluSp SINE Alu -181 132 1 1155 128 70 185 chr18 82471 82619 -86594929 + MER2 DNA MER2_type 2 165 -180 183 42 0 0 chr18 82619 82643 -86594905 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2123 133 0 0 chr18 82645 82938 -86594610 - AluSx SINE Alu -19 293 1 1155 128 70 185 chr18 82938 82968 -86594580 + MER2 DNA MER2_type 166 198 -147 3570 45 9 2 chr18 82968 83410 -86594138 + L1PA5 LINE L1 5707 6151 -3 1155 128 70 185 chr18 83410 83611 -86593937 + MER2 DNA MER2_type 198 341 -4 2319 106 0 0 chr18 83640 83942 -86593606 - AluSq SINE Alu -11 302 1 1216 154 56 49 chr18 84768 85094 -86592454 + MER33 DNA MER1_type 1 314 -10 227 239 141 22 chr18 85115 85207 -86592341 - MIR SINE MIR -3 259 157 240 167 0 0 chr18 85207 85255 -86592293 + T-rich Low_complexity Low_complexity 1 48 0 1954 134 3 10 chr18 85281 85579 -86591969 - AluSx SINE Alu -8 304 9 2048 127 0 0 chr18 85883 86158 -86591390 + AluSx SINE Alu 1 275 -37 2328 72 10 16 chr18 86159 86465 -86591083 + AluY SINE Alu 1 304 -7 4257 80 37 36 chr18 86486 86762 -86590786 + L1PB2 LINE L1 5396 5670 -481 2202 110 3 0 chr18 86762 87061 -86590487 + AluSx SINE Alu 1 300 -12 4257 80 37 36 chr18 87061 87418 -86590130 + L1PB2 LINE L1 5670 6033 -118 1560 82 0 24 chr18 87418 87624 -86589924 + AluSg/x SINE Alu 101 301 -11 4257 80 37 36 chr18 87624 87690 -86589858 + L1PB2 LINE L1 6033 6097 -54 1912 170 0 7 chr18 87775 88081 -86589467 + AluJb SINE Alu 1 304 -8 912 147 29 135 chr18 88160 88405 -86589143 - MER20 DNA MER1_type 0 219 1 2168 132 0 0 chr18 89057 89352 -86588196 + AluSx SINE Alu 1 295 -17 407 233 11 0 chr18 89532 89622 -86587926 + MER58C DNA MER1_type 11 101 -114 1220 168 5 5 chr18 89623 89819 -86587729 - AluJb SINE Alu -29 283 88 281 123 301 0 chr18 89857 89930 -86587618 + MER58C DNA MER1_type 76 170 -45 21 0 0 0 chr18 89930 89951 -86587597 + AT_rich Low_complexity Low_complexity 1 21 0 970 66 0 0 chr18 90296 90417 -86587131 + AluY SINE Alu 1 121 -190 1531 165 67 9 chr18 90679 90994 -86586554 - Tigger3(Golem) DNA MER2_type 0 3029 2697 338 325 18 61 chr18 91075 91238 -86586310 - MIR3 SINE MIR -23 185 30 835 171 43 0 chr18 92575 92715 -86584833 + AluJo SINE Alu 1 146 -166 1454 108 22 35 chr18 92717 92949 -86584599 + AluSq SINE Alu 85 313 0 221 293 85 12 chr18 92955 93037 -86584511 - L2 LINE L2 -54 3259 3172 * 671 274 17 6 chr18 93022 93197 -86584351 - MIR SINE MIR 0 262 86 731 120 129 69 chr18 93227 93444 -86584104 - MER33 DNA MER1_type 0 324 95 1315 115 0 0 chr18 93449 93623 -86583925 + AluSx SINE Alu 3 176 -136 528 45 0 0 chr18 93623 93689 -86583859 - MER33 DNA MER1_type -216 108 43 1150 169 0 0 chr18 93829 94007 -86583541 + AluSg/x SINE Alu 134 311 -1 25 0 0 0 chr18 94033 94058 -86583490 + AT_rich Low_complexity Low_complexity 1 25 0 735 200 86 0 chr18 94061 94201 -86583347 + FAM SINE Alu 1 152 -33 276 30 0 0 chr18 94202 94235 -86583313 + (TC)n Simple_repeat Simple_repeat 2 34 0 234 130 0 0 chr18 94251 94297 -86583251 + LTR66 LTR ERVL 394 439 -171 210 37 0 0 chr18 94329 94356 -86583192 + (CAG)n Simple_repeat Simple_repeat 2 28 0 807 119 7 63 chr18 94359 94502 -86583046 + FLAM_C SINE Alu 7 141 -2 985 316 152 37 chr18 94685 94907 -86582641 - L2 LINE L2 -47 3266 3071 1974 121 7 23 chr18 94907 95213 -86582335 - AluSx SINE Alu -11 301 1 985 316 152 37 chr18 95213 95852 -86581696 - L2 LINE L2 -242 3071 2301 2176 112 3 0 chr18 95852 96146 -86581402 + AluSx SINE Alu 1 295 -17 1267 118 102 0 chr18 96206 96451 -86581097 + L1MA8 LINE L1 6001 6270 -21 2099 143 0 0 chr18 96674 96974 -86580574 - AluSx SINE Alu -9 303 4 2044 158 0 7 chr18 97228 97526 -86580022 + AluSx SINE Alu 1 296 -16 185 310 42 14 chr18 97631 97702 -86579846 + L2 LINE L2 2689 2761 -553 183 194 0 0 chr18 98644 98680 -86578868 - MIR SINE MIR -1 261 226 462 296 35 161 chr18 98682 99047 -86578501 + L2 LINE L2 2851 3142 -130 1084 187 43 5 chr18 99047 99256 -86578292 + MER20 DNA MER1_type 1 217 -2 462 296 35 161 chr18 99256 99373 -86578175 + L2 LINE L2 3142 3272 0 2442 50 3 17 chr18 99761 100062 -86577486 - AluY SINE Alu -14 297 1 2269 109 0 13 chr18 100111 100424 -86577124 - AluSq SINE Alu -4 309 1 2179 138 0 0 chr18 100445 100757 -86576791 - AluSx SINE Alu 0 312 1 1541 172 6 21 chr18 100903 101235 -86576313 + L1MB8 LINE L1 5817 6143 -35 2254 105 3 3 chr18 102154 102450 -86575098 - AluSx SINE Alu -16 296 1 795 206 17 120 chr18 102559 102851 -86574697 + L1MC4 LINE L1 7750 8011 -31 222 314 0 0 chr18 102942 102993 -86574555 + L2 LINE L2 3210 3260 -12 358 179 112 69 chr18 104798 104899 -86572649 + FLAM_A SINE Alu 11 93 -40 326 346 164 5 chr18 105470 105678 -86571870 + MIR SINE MIR 10 250 -12 2060 115 3 3 chr18 106422 106709 -86570839 + AluSx SINE Alu 2 288 -24 1802 124 6 60 chr18 106729 107044 -86570504 + AluSq SINE Alu 1 298 -15 393 296 15 23 chr18 107221 107353 -86570195 - MER20B DNA MER1_type -652 131 1 239 350 20 10 chr18 107728 107832 -86569716 + MIR SINE MIR 102 207 -55 341 220 211 46 chr18 108007 108116 -86569432 - MER5A DNA MER1_type -16 173 47 199 319 142 0 chr18 108161 108302 -86569246 + MIR SINE MIR 75 235 -27 880 153 0 0 chr18 109217 109348 -86568200 + FLAM_C SINE Alu 2 132 -1 937 130 0 22 chr18 109642 109780 -86567768 + AluJo SINE Alu 1 135 -177 2171 101 3 3 chr18 110103 110389 -86567159 + AluSq SINE Alu 1 286 -27 806 234 26 5 chr18 111043 111235 -86566313 + MLT1E1 LTR MaLR 1 196 -458 2041 134 0 3 chr18 111269 111559 -86565989 - AluSq SINE Alu -24 289 1 288 0 0 0 chr18 111564 111596 -86565952 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1359 205 40 91 chr18 112487 112907 -86564641 + MLT1E1 LTR MaLR 178 576 -78 258 221 59 0 chr18 112907 112975 -86564573 - L1M4 LINE L1 -1609 4537 4466 233 250 0 43 chr18 112992 113084 -86564464 - HAL1b LINE L1 -621 727 640 1434 130 4 63 chr18 113104 113207 -86564341 - AluSx SINE Alu -76 236 129 1930 98 30 4 chr18 113207 113472 -86564076 - AluSc SINE Alu -20 289 18 1434 130 4 63 chr18 113472 113607 -86563941 - AluSx SINE Alu -183 129 12 815 120 24 0 chr18 113714 113839 -86563709 + AluSg/x SINE Alu 164 291 -19 992 179 6 6 chr18 115619 115798 -86561750 - AluJb SINE Alu 0 312 134 1891 142 42 3 chr18 115798 116086 -86561462 - AluSx SINE Alu -13 299 1 2106 108 71 40 chr18 116342 116695 -86560853 - THE1B LTR MaLR 0 364 1 252 314 51 8 chr18 116702 116820 -86560728 + MIR3 SINE MIR 57 179 -29 942 230 28 16 chr18 117553 117801 -86559747 + L1ME2 LINE L1 3359 3609 -2537 2733 198 76 30 chr18 117815 118562 -86558986 + L1ME2 LINE L1 4035 4816 -1330 1411 78 0 11 chr18 118571 118762 -86558786 + AluSg/x SINE Alu 115 303 -7 3517 207 67 22 chr18 118763 120003 -86557545 + L1ME2 LINE L1 4866 6155 -9 2474 84 0 0 chr18 121012 121320 -86556228 - AluY SINE Alu -3 308 1 2283 92 0 0 chr18 121322 121625 -86555923 + MER4E LTR ERV1 464 766 0 1391 162 11 38 chr18 121737 122002 -86555546 - MER44D DNA MER2_type 0 605 293 1164 194 22 22 chr18 122400 122622 -86554926 - MER44D DNA MER2_type -404 301 80 2291 94 0 7 chr18 122623 122922 -86554626 - AluSx SINE Alu -15 297 1 310 200 0 0 chr18 122922 122982 -86554566 + L1MC4 LINE L1 5894 5953 -2089 405 297 113 30 chr18 123036 123378 -86554170 - L2 LINE L2 -249 3023 2068 248 150 0 0 chr18 123398 123438 -86554110 - MER49 LTR ERV1 -2 921 882 1296 169 21 29 chr18 123438 123681 -86553867 + AluJo SINE Alu 1 241 -71 401 202 219 0 chr18 123929 124048 -86553500 + MIR SINE MIR 26 170 -92 851 140 7 28 chr18 124048 124191 -86553357 + FLAM_C SINE Alu 1 140 -3 1484 197 3 26 chr18 124193 124498 -86553050 + AluJb SINE Alu 1 298 -14 2280 95 0 7 chr18 125573 125869 -86551679 + AluSx SINE Alu 1 294 -18 2240 92 0 0 chr18 125974 126257 -86551291 - AluSg SINE Alu -27 283 1 1218 126 0 11 chr18 126679 126853 -86550695 - FRAM SINE Alu -11 165 1 2054 243 106 21 chr18 127146 127817 -86549731 - L2 LINE L2 -2081 1233 506 2287 69 0 0 chr18 128021 128297 -86549251 + AluY SINE Alu 1 276 -35 270 304 22 22 chr18 128399 128491 -86549057 - MIR SINE MIR -165 97 6 204 284 37 12 chr18 129472 129553 -86547995 - MIR SINE MIR -123 139 57 325 250 119 54 chr18 129763 129931 -86547617 - MLT1L LTR MaLR -102 513 335 2108 127 0 10 chr18 130025 130325 -86547223 + AluSx SINE Alu 1 297 -15 507 218 75 7 chr18 130955 131152 -86546396 - L1MEc LINE L1 -3659 2881 2660 468 282 128 36 chr18 131127 131620 -86545928 - L1MEc LINE L1 -3997 2724 2187 * 614 237 178 59 chr18 131657 131724 -86545824 - L1MEc LINE L1 -4707 1833 1775 2590 93 0 43 chr18 131724 131866 -86545682 - MER46B DNA MER2_type -2496 235 88 1804 135 50 3 chr18 131866 132148 -86545400 + AluJb SINE Alu 1 295 -17 2590 93 0 43 chr18 132148 132344 -86545204 - MER46B DNA MER2_type -2643 88 37 2133 130 3 0 chr18 132344 132637 -86544911 - AluSg SINE Alu -16 294 1 2590 93 0 43 chr18 132637 132673 -86544875 - MER46B DNA MER2_type -2694 37 1 614 237 178 59 chr18 132673 133077 -86544471 - L1MEc LINE L1 -4765 1775 1306 1100 99 0 7 chr18 133080 133254 -86544294 + AluSg/x SINE Alu 135 307 0 266 183 27 30 chr18 133409 133489 -86544059 + MER21B LTR ERV1 630 783 -148 1675 178 7 14 chr18 133529 133822 -86543726 + AluJo SINE Alu 1 291 -21 2227 120 53 39 chr18 133849 134208 -86543340 + THE1B LTR MaLR 1 364 0 2446 56 3 16 chr18 134776 135081 -86542467 + AluY SINE Alu 1 301 -10 2140 49 4 0 chr18 135328 135575 -86541973 - L1PA5 LINE L1 -8 6146 5899 2760 7 3 0 chr18 135868 136166 -86541382 - AluY SINE Alu -12 299 1 2034 96 0 84 chr18 136329 136652 -86540896 - AluSx SINE Alu -16 296 1 704 139 0 0 chr18 139205 139306 -86538242 + AluS SINE Alu 2 102 -211 180 0 0 0 chr18 139408 139428 -86538120 + (A)n Simple_repeat Simple_repeat 1 20 0 2202 95 10 7 chr18 139601 139896 -86537652 + AluSx SINE Alu 5 300 -12 662 52 21 31 chr18 140956 141052 -86536496 + AluY SINE Alu 2 96 -222 287 43 0 0 chr18 141152 141193 -86536355 - AluY SINE Alu -263 36 1 274 274 83 65 chr18 141236 141404 -86536144 - L2 LINE L2 -1313 2001 1831 468 263 29 57 chr18 141537 141746 -86535802 + MLT1L LTR MaLR 6 208 -407 998 204 68 109 chr18 142088 142654 -86534894 - L1ME LINE L1 -683 5479 4963 1615 192 18 3 chr18 142654 142940 -86534608 - AluJb SINE Alu -22 290 1 998 204 68 109 chr18 142940 143121 -86534427 - L1ME LINE L1 -1199 4963 4776 229 121 0 0 chr18 143221 143254 -86534294 + Alu SINE Alu 189 221 -81 536 198 0 0 chr18 143256 143342 -86534206 - AluJ/FLAM SINE Alu -225 87 2 578 294 87 9 chr18 143490 143721 -86533827 - MIR SINE MIR -12 250 2 1548 183 41 117 chr18 144090 144173 -86533375 + LTR2 LTR ERV1 41 129 -320 261 0 0 0 chr18 144173 144202 -86533346 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1548 183 41 117 chr18 144202 144561 -86532987 + LTR2 LTR ERV1 129 449 0 502 271 42 42 chr18 144561 144753 -86532795 + L2 LINE L2 2875 3066 -247 387 228 25 0 chr18 144888 144967 -86532581 + MER91A DNA MER1_type 15 95 -101 296 297 22 0 chr18 145037 145128 -86532420 + L2 LINE L2 3179 3271 -1 313 113 0 32 chr18 145155 145217 -86532331 - AluSp/q SINE Alu -4 299 240 1457 163 105 0 chr18 146476 146733 -86530815 - AluJb SINE Alu -28 284 1 354 283 7 65 chr18 146782 146920 -86530628 + MIR SINE MIR 107 236 -26 1898 106 19 0 chr18 147202 147467 -86530081 + AluSp SINE Alu 1 270 -43 316 106 21 0 chr18 147569 147616 -86529932 - AluSp/q SINE Alu -16 287 240 2284 94 0 3 chr18 147686 147993 -86529555 - AluSc SINE Alu -3 306 1 1783 191 0 0 chr18 148008 148291 -86529257 - AluJo SINE Alu -29 283 1 1963 240 132 30 chr18 148391 149104 -86528444 + L1MC4 LINE L1 6883 7668 -374 310 213 13 13 chr18 149213 149296 -86528252 - MLT1B LTR MaLR -36 431 272 1004 110 117 0 chr18 149900 150045 -86527503 + U1 snRNA snRNA 3 164 -1 23 33 0 0 chr18 150078 150108 -86527440 + AT_rich Low_complexity Low_complexity 1 30 0 215 329 169 27 chr18 150136 150355 -86527193 + L3 LINE CR1 35 284 -1293 192 286 250 24 chr18 150379 150547 -86527001 + L3 LINE CR1 1367 1572 -5 311 244 28 61 chr18 150742 150953 -86526595 - L1M LINE L1 -757 5389 5208 1968 120 41 0 chr18 151255 151546 -86526002 - AluSg SINE Alu -7 303 1 1933 116 18 0 chr18 151987 152264 -86525284 + AluSx SINE Alu 1 282 -30 2388 77 0 7 chr18 152524 152827 -86524721 + AluSc SINE Alu 1 298 -11 1578 101 10 5 chr18 152879 153088 -86524460 + AluSx SINE Alu 1 210 -102 1013 102 8 0 chr18 153188 153315 -86524233 - AluSg SINE Alu -182 128 1 24 0 0 0 chr18 153531 153555 -86523993 + AT_rich Low_complexity Low_complexity 1 24 0 1766 142 19 10 chr18 153535 153844 -86523704 - L1PA16 LINE L1 0 6166 5855 393 293 23 30 chr18 154449 154582 -86522966 - MIR3 SINE MIR -25 183 52 3777 145 3 26 chr18 154880 155484 -86522064 - MER49 LTR ERV1 -255 668 78 2226 106 7 0 chr18 155484 155776 -86521772 + AluSq SINE Alu 6 299 -14 3777 145 3 26 chr18 155776 155820 -86521728 - MER49 LTR ERV1 -845 78 35 327 139 97 0 chr18 155821 155893 -86521655 - L1MB2 LINE L1 -213 5958 5880 1502 97 0 0 chr18 156979 157165 -86520383 + AluSx SINE Alu 1 186 -126 302 167 0 0 chr18 157169 157217 -86520331 + AluSx SINE Alu 234 281 -21 2368 81 0 16 chr18 157320 157628 -86519920 + AluSg SINE Alu 1 303 -7 2131 109 3 3 chr18 157840 158123 -86519425 + AluSx SINE Alu 1 283 -29 1055 195 9 5 chr18 258729 258944 -86418604 - MER2 DNA MER2_type -129 216 1 23 33 0 0 chr18 259208 259238 -86418310 + AT_rich Low_complexity Low_complexity 1 30 0 2581 203 85 34 chr18 259482 259619 -86417929 - L1ME2 LINE L1 -9 6155 6026 731 163 32 0 chr18 259619 259742 -86417806 + FLAM_C SINE Alu 1 127 -6 2581 203 85 34 chr18 259742 259780 -86417768 - L1ME2 LINE L1 -138 6026 5991 2240 97 3 16 chr18 259780 260091 -86417457 + AluSg SINE Alu 1 307 -3 2581 203 85 34 chr18 260091 260858 -86416690 - L1ME2 LINE L1 -173 5991 5169 1276 164 48 8 chr18 261085 261335 -86416213 - MER2 DNA MER2_type 0 345 86 215 173 19 0 chr18 261357 261409 -86416139 + CT-rich Low_complexity Low_complexity 2 54 0 235 186 0 0 chr18 261421 261464 -86416084 - MER2 DNA MER2_type -302 43 1 346 103 35 0 chr18 261469 261527 -86416021 - L1M4 LINE L1 -1922 4224 4165 * 3320 175 61 29 chr18 261518 262283 -86415265 - L1MD2 LINE L1 -232 6127 5338 22 35 0 0 chr18 262953 262982 -86414566 + AT_rich Low_complexity Low_complexity 1 29 0 2155 94 3 14 chr18 262992 263279 -86414269 - AluSx SINE Alu -28 284 1 2753 42 0 0 chr18 264440 264771 -86412777 - L1PA7 LINE L1 -2 6152 5822 2253 105 10 10 chr18 264778 265084 -86412464 - AluSx SINE Alu -6 306 1 324 0 0 0 chr18 265156 265192 -86412356 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 2143 106 0 0 chr18 265192 265475 -86412073 - AluSx SINE Alu -28 284 2 327 276 35 76 chr18 265514 265659 -86411889 - MIR SINE MIR -110 152 14 1696 184 122 19 chr18 267895 268313 -86409235 + LTR40b LTR ERVL 1 461 -1 244 321 12 0 chr18 268787 268801 -86408747 - LTR67 LTR ERVL -377 180 103 257 191 32 32 chr18 268801 268864 -86408684 - MLT1J LTR MaLR -350 161 99 485 221 295 3 chr18 269142 269440 -86408108 - L1ME2 LINE L1 -1113 5033 4649 2514 60 0 7 chr18 269440 269740 -86407808 - AluSq SINE Alu -15 298 1 303 207 232 0 chr18 269929 270011 -86407537 - AluJ/FLAM SINE Alu -201 101 1 2220 67 0 14 chr18 270728 271011 -86406537 + AluY SINE Alu 1 279 -32 216 0 0 0 chr18 271011 271035 -86406513 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 2252 104 10 0 chr18 271137 271435 -86406113 - AluSq SINE Alu -12 301 1 1630 155 48 10 chr18 271796 272086 -86405462 + AluJb SINE Alu 1 301 -11 2031 145 7 10 chr18 273183 273493 -86404055 - AluJb SINE Alu -3 309 1 333 307 202 5 chr18 273815 274033 -86403515 + L1M4 LINE L1 4016 4276 -1870 1724 187 79 15 chr18 274129 274471 -86403077 - THE1B LTR MaLR 0 364 1 11439 80 33 7 chr18 274471 274527 -86403021 - THE1B-int LTR MaLR 0 1580 1527 2128 152 0 0 chr18 274527 274837 -86402711 + AluSx SINE Alu 1 310 -2 11439 80 33 7 chr18 274837 276320 -86401228 - THE1B-int LTR MaLR -53 1527 1 2029 137 76 15 chr18 276320 276662 -86400886 - THE1B LTR MaLR 0 364 2 1695 160 0 4 chr18 276662 276924 -86400624 - AluJb SINE Alu -31 281 21 228 258 91 0 chr18 277040 277106 -86400442 + MER102a DNA MER1_type 227 298 -32 1990 127 11 0 chr18 277412 277695 -86399853 + AluSx SINE Alu 1 286 -26 2456 69 30 0 chr18 278325 278628 -86398920 + AluSx SINE Alu 1 312 0 2345 42 0 17 chr18 278901 279245 -86398303 + AluY SINE Alu 1 339 0 422 318 29 8 chr18 279458 279700 -86397848 - HAL1 LINE L1 -857 1650 1404 22 0 0 0 chr18 279814 279836 -86397712 + AT_rich Low_complexity Low_complexity 1 22 0 922 146 0 7 chr18 279840 279977 -86397571 - AluJb SINE Alu -176 136 1 26 50 0 0 chr18 279988 280028 -86397520 + AT_rich Low_complexity Low_complexity 1 40 0 2248 129 0 3 chr18 280074 280385 -86397163 - AluJb SINE Alu -2 310 1 362 230 65 20 chr18 280393 280593 -86396955 - L1MEd LINE L1 -5016 1103 895 985 219 33 102 chr18 280704 281221 -86396327 - L1MD3 LINE L1 -7 8035 7564 300 318 8 30 chr18 281384 281516 -86396032 - L1MC4 LINE L1 -214 7828 7700 273 184 79 0 chr18 281560 281636 -86395912 - L1MC5 LINE L1 -373 7588 7507 2059 105 28 11 chr18 281661 281947 -86395601 - AluSx SINE Alu -20 292 2 309 286 0 34 chr18 282129 282248 -86395300 - L1MC4 LINE L1 -547 7495 7381 3373 97 57 38 chr18 282317 282620 -86394928 - MER4B LTR ERV1 0 610 289 2322 94 3 0 chr18 282620 282918 -86394630 + AluSp SINE Alu 1 299 -14 3373 97 57 38 chr18 282918 283189 -86394359 - MER4B LTR ERV1 -321 289 25 336 24 0 0 chr18 283544 283585 -86393963 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 2123 107 0 0 chr18 283585 283865 -86393683 - AluSx SINE Alu -32 280 1 468 35 0 0 chr18 283975 284033 -86393515 + (TG)n Simple_repeat Simple_repeat 2 59 0 3370 167 17 0 chr18 284035 284639 -86392909 - LTR31 LTR ERV1 -5 614 1 2604 141 32 44 chr18 284736 284913 -86392635 - L1MC1 LINE L1 -6 6327 6149 1727 176 14 0 chr18 284913 285209 -86392339 - AluJb SINE Alu -12 300 1 2604 141 32 44 chr18 285209 285495 -86392053 - L1MC1 LINE L1 -184 6149 5868 1794 129 82 38 chr18 285495 285835 -86391713 + THE1A LTR MaLR 1 355 0 2604 141 32 44 chr18 285835 285896 -86391652 - L1MC1 LINE L1 -465 5868 5808 556 190 8 0 chr18 285943 286064 -86391484 - MLT2B1 LTR ERVL -398 122 1 721 223 0 0 chr18 286137 286267 -86391281 + FLAM_A SINE Alu 1 130 -3 24 0 0 0 chr18 286429 286453 -86391095 + AT_rich Low_complexity Low_complexity 1 24 0 2066 142 0 0 chr18 286568 286857 -86390691 + AluSx SINE Alu 1 289 -23 2275 117 0 0 chr18 287007 287306 -86390242 - AluSx SINE Alu -13 299 1 1835 141 0 35 chr18 287613 287931 -86389617 - AluJb SINE Alu 0 310 3 28 38 0 19 chr18 287993 288012 -86389536 + AT_rich Low_complexity Low_complexity 1 19 -33 2149 95 32 0 chr18 288012 288295 -86389253 + AluSx SINE Alu 3 294 -18 28 38 0 19 chr18 288295 288328 -86389220 + AT_rich Low_complexity Low_complexity 19 52 0 620 110 0 0 chr18 288718 288800 -86388748 + AluS SINE Alu 1 82 -230 279 54 0 0 chr18 288825 288862 -86388686 + (TC)n Simple_repeat Simple_repeat 2 38 0 1589 89 122 0 chr18 288872 289118 -86388430 - AluSx SINE Alu -36 276 1 586 257 133 30 chr18 289383 289825 -86387723 + MLT1K LTR MaLR 79 578 -10 456 191 56 0 chr18 290096 290185 -86387363 - FRAM/FAM SINE Alu -87 89 1 246 339 54 18 chr18 290198 290310 -86387238 + MIR3 SINE MIR 93 208 0 1138 301 15 3 chr18 290517 290852 -86386696 + MLT1I LTR MaLR 64 402 -7 817 110 197 0 chr18 291495 291622 -86385926 - AluSx SINE Alu -13 299 148 700 122 0 0 chr18 291623 291721 -86385827 - AluSx SINE Alu -214 98 1 338 113 0 0 chr18 291957 292010 -86385538 - Alu SINE Alu 0 302 250 987 120 0 28 chr18 292010 292152 -86385396 - AluSx SINE Alu -174 138 1 623 273 23 0 chr18 292207 292379 -86385169 - MLT2E LTR ERVL -452 176 1 280 207 149 0 chr18 292663 292750 -86384798 - MER94 DNA DNA -34 100 1 276 30 0 0 chr18 292926 292959 -86384589 + (T)n Simple_repeat Simple_repeat 1 33 0 5259 286 42 13 chr18 293261 294845 -86382703 - PRIMA41-int LTR ERV1 -1593 6163 4515 2381 117 5 57 chr18 294845 295020 -86382528 + THE1B LTR MaLR 1 147 -217 1912 123 4 0 chr18 295020 295288 -86382260 - AluSx SINE Alu -21 291 23 2381 117 5 57 chr18 295288 295496 -86382052 + THE1B LTR MaLR 147 364 0 5259 286 42 13 chr18 295496 295779 -86381769 - PRIMA41-int LTR ERV1 -3241 4515 4242 704 293 0 0 chr18 296252 296426 -86381122 - MER41D LTR ERV1 0 557 384 22 0 0 0 chr18 297025 297047 -86380501 + AT_rich Low_complexity Low_complexity 1 22 0 1978 151 3 0 chr18 297055 297340 -86380208 - AluSx SINE Alu -26 286 1 648 165 105 0 chr18 297665 297798 -86379750 + MER4B LTR ERV1 4 150 -460 3338 126 28 2 chr18 297819 298389 -86379159 - L1MA2 LINE L1 -2 6302 5718 1178 153 22 0 chr18 298391 298620 -86378928 - L1MA2 LINE L1 -804 5501 5268 1800 124 69 33 chr18 298625 298689 -86378859 - THE1C LTR MaLR 0 428 368 2096 114 0 0 chr18 298689 298969 -86378579 - AluSg1 SINE Alu -28 281 2 1800 124 69 33 chr18 298969 299296 -86378252 - THE1C LTR MaLR -60 368 1 8865 216 53 15 chr18 299302 300287 -86377261 - L1 LINE L1 -887 6678 5731 1800 207 59 10 chr18 300287 300693 -86376855 - MSTA LTR MaLR -2 426 1 7331 210 30 23 chr18 300693 302331 -86375217 - MSTA-int LTR MaLR 0 1651 1 1892 191 64 17 chr18 302331 302740 -86374808 - MSTA LTR MaLR 0 428 1 8865 216 53 15 chr18 302740 303111 -86374437 - L1 LINE L1 -1834 5731 5375 2209 130 0 0 chr18 303111 303411 -86374137 - AluSx SINE Alu -12 300 1 8865 216 53 15 chr18 303411 305990 -86371558 - L1 LINE L1 -2190 5375 2457 2281 94 7 10 chr18 305990 306288 -86371260 - AluY SINE Alu -14 297 1 8865 216 53 15 chr18 306288 307164 -86370384 - L1 LINE L1 -5108 2457 1615 219 69 0 0 chr18 307180 307209 -86370339 + (CCCTAG)n Simple_repeat Simple_repeat 5 33 0 1158 77 0 16 chr18 307213 307396 -86370152 + (CCCTAA)n Simple_repeat Simple_repeat 1 180 0 856 110 6 43 chr18 307423 307768 -86369780 + (CCCTAA)n Simple_repeat Simple_repeat 1 332 0 1678 183 3 3 chr18 308010 308299 -86369249 + AluSx SINE Alu 1 289 -23 955 301 55 33 chr18 308520 308586 -86368962 + L1M4 LINE L1 3677 3740 -2406 2224 116 0 10 chr18 308586 308889 -86368659 + AluSq SINE Alu 1 300 -13 955 301 55 33 chr18 308889 309514 -86368034 + L1M4 LINE L1 3740 4383 -1763 1447 248 0 0 chr18 309518 309816 -86367732 + AluJb SINE Alu 5 302 -10 1748 174 3 3 chr18 309837 310136 -86367412 + AluJo SINE Alu 1 299 -13 1291 252 15 36 chr18 310138 310547 -86367001 - L1M4 LINE L1 -1293 4853 4454 2233 108 0 19 chr18 310547 310863 -86366685 - AluSg SINE Alu 0 310 1 1291 252 15 36 chr18 310863 310922 -86366626 - L1M4 LINE L1 -1692 4454 4395 949 204 20 5 chr18 310924 311120 -86366428 - AluJo SINE Alu -24 288 90 283 0 0 0 chr18 311143 311175 -86366373 - MER31-int LTR ERV1 -3839 1097 1066 695 123 0 0 chr18 311179 311285 -86366263 + MLT2B3 LTR ERVL 1 106 -448 251 217 60 36 chr18 311740 311823 -86365725 - L1MC4 LINE L1 -2 8040 7956 1218 169 149 4 chr18 312778 313020 -86364528 + AluJb SINE Alu 1 277 -35 589 213 69 31 chr18 313031 313191 -86364357 + LTR35 LTR ERV1 453 618 0 21 0 0 0 chr18 313238 313259 -86364289 + AT_rich Low_complexity Low_complexity 1 21 0 1972 137 9 19 chr18 313442 313757 -86363791 + AluSx SINE Alu 1 312 0 1996 141 3 10 chr18 313922 314227 -86363321 + AluSx SINE Alu 5 307 -5 1966 106 46 7 chr18 314235 314518 -86363030 + AluSp SINE Alu 1 294 -19 1698 146 64 11 chr18 314533 314813 -86362735 + AluJb SINE Alu 1 295 -17 1915 162 3 9 chr18 314833 315148 -86362400 + AluSq SINE Alu 1 313 0 957 123 0 0 chr18 315279 315458 -86362090 + (CA)n Simple_repeat Simple_repeat 2 180 0 183 272 0 0 chr18 318123 318215 -86359333 + (CA)n Simple_repeat Simple_repeat 1 92 0 403 321 15 4 chr18 319159 319421 -86358127 + (CA)n Simple_repeat Simple_repeat 1 265 0 473 286 11 11 chr18 319437 319615 -86357933 + (CA)n Simple_repeat Simple_repeat 1 178 0 269 236 55 73 chr18 321638 321748 -86355800 - MIR SINE MIR -74 188 81 2199 88 7 7 chr18 321761 322077 -86355471 - AluSx SINE Alu 0 316 1 227 167 111 0 chr18 323219 323273 -86354275 - MIR SINE MIR -61 147 88 1038 151 13 0 chr18 323919 324078 -86353470 + AluJb SINE Alu 133 293 -19 1096 160 37 126 chr18 324081 324280 -86353268 + Cheshire DNA MER1_type 1065 1225 -1195 2118 120 0 24 chr18 324280 324398 -86353150 - AluSx SINE Alu -25 287 168 4425 174 29 41 chr18 324398 325379 -86352169 - LTR5 LTR ERVK 0 969 1 2118 120 0 24 chr18 325379 325551 -86351997 - AluSx SINE Alu -144 168 4 1096 160 37 126 chr18 325551 325676 -86351872 + Cheshire DNA MER1_type 1225 1360 -1060 828 140 129 22 chr18 325672 325850 -86351698 + Cheshire DNA MER1_type 2108 2304 -116 * 1214 154 14 28 chr18 325915 326129 -86351419 + AluJb SINE Alu 85 295 -17 369 226 202 0 chr18 326178 326302 -86351246 - MIR SINE MIR -89 173 25 2263 113 3 0 chr18 326541 326843 -86350705 + AluSx SINE Alu 1 303 -9 507 151 12 12 chr18 326865 326951 -86350597 + FLAM_A SINE Alu 31 116 -26 2201 113 0 7 chr18 327110 327410 -86350138 + AluSx SINE Alu 2 299 -13 2235 85 10 10 chr18 327772 328065 -86349483 + AluY SINE Alu 1 293 -18 715 152 0 0 chr18 328588 328700 -86348848 - AluSg/x SINE Alu -12 298 187 777 97 6 29 chr18 328700 328875 -86348673 + (CCCTAA)n Simple_repeat Simple_repeat 5 175 0 2207 113 3 0 chr18 328916 329218 -86348330 + AluSx SINE Alu 1 303 -9 331 172 0 0 chr18 331316 331374 -86346174 + L1PB1 LINE L1 989 1046 -5817 11203 210 31 35 chr18 331378 336696 -86340852 + L1PB1 LINE L1 1094 6507 -360 345 151 0 0 chr18 336696 336782 -86340766 + (TA)n Simple_repeat Simple_repeat 1 86 0 2103 173 5 8 chr18 336783 337153 -86340395 + L1PB1 LINE L1 6499 6867 0 6698 120 26 3 chr18 337167 338274 -86339274 + L1MA1 LINE L1 5172 6302 0 244 269 96 0 chr18 338369 338473 -86339075 - MER53 DNA DNA -71 118 5 21 0 0 0 chr18 338893 338914 -86338634 + AT_rich Low_complexity Low_complexity 1 21 0 1430 210 7 0 chr18 339620 339896 -86337652 + AluJo SINE Alu 1 278 -34 2142 112 3 3 chr18 340131 340425 -86337123 - AluSg1 SINE Alu -15 294 1 21 57 0 0 chr18 340916 340951 -86336597 + AT_rich Low_complexity Low_complexity 1 35 0 5145 237 38 51 chr18 341356 343211 -86334337 + L1P3 LINE L1 10 1825 -4626 10079 119 55 16 chr18 343213 345276 -86332272 + L1PA7 LINE L1 3784 5900 -254 2183 137 0 3 chr18 345276 345590 -86331958 + AluSp SINE Alu 1 313 0 10079 119 55 16 chr18 345590 345850 -86331698 + L1PA7 LINE L1 5900 6149 -5 6005 244 61 25 chr18 347156 349380 -86328168 + L1MB3 LINE L1 2898 5200 -946 * 43057 38 22 2 chr18 349376 355432 -86322116 + L1PA3 LINE L1 13 6196 0 1597 180 129 20 chr18 355448 356351 -86321197 + L1MB3 LINE L1 5188 6180 0 243 246 64 59 chr18 356356 356610 -86320938 - L1M LINE L1 -788 5358 5128 656 208 44 0 chr18 356623 356782 -86320766 + L1MB4 LINE L1 6013 6178 -2 192 333 153 16 chr18 358350 358539 -86319009 - MIR SINE MIR -24 238 24 210 150 0 0 chr18 360962 361002 -86316546 + (TCC)n Simple_repeat Simple_repeat 2 41 0 234 128 0 0 chr18 362755 362794 -86314754 + (A)n Simple_repeat Simple_repeat 1 39 0 412 152 0 13 chr18 363103 363182 -86314366 - AluJ/FRAM SINE Alu -3 309 232 2275 68 10 10 chr18 363258 363566 -86313982 + AluSp SINE Alu 1 308 -5 2148 76 7 7 chr18 364277 364568 -86312980 + AluSc SINE Alu 15 305 -4 228 140 105 0 chr18 364578 364635 -86312913 + GA-rich Low_complexity Low_complexity 3 65 0 1353 159 21 87 chr18 364650 364775 -86312773 + AluJo SINE Alu 1 133 -179 2142 97 0 26 chr18 364775 365086 -86312462 - AluSq SINE Alu -10 303 1 1353 159 21 87 chr18 365086 365283 -86312265 + AluJo SINE Alu 133 303 -9 2301 99 0 0 chr18 365283 365595 -86311953 + AluSx SINE Alu 1 312 0 368 186 14 0 chr18 365638 365708 -86311840 - AluJ/FRAM SINE Alu 0 302 232 2112 84 10 3 chr18 365783 366080 -86311468 + AluSq SINE Alu 1 299 -14 2226 81 3 3 chr18 366746 367043 -86310505 + AluSx SINE Alu 15 311 -1 318 253 48 64 chr18 367049 367073 -86310475 + L1M4 LINE L1 4305 4328 -1818 1330 212 26 30 chr18 367073 367251 -86310297 - AluJb SINE Alu -1 301 123 192 48 71 0 chr18 367251 367293 -86310255 + T-rich Low_complexity Low_complexity 2 46 0 1330 212 26 30 chr18 367293 367416 -86310132 - AluJb SINE Alu -179 123 1 318 253 48 64 chr18 367416 367640 -86309908 + L1M4 LINE L1 4328 4549 -1597 1617 244 87 7 chr18 367643 368229 -86309319 + L1M4 LINE L1 4740 5372 -774 1867 150 3 0 chr18 368233 368527 -86309021 + AluSx SINE Alu 3 297 -15 298 220 132 33 chr18 368539 368624 -86308924 + MLT1C LTR MaLR 278 371 -134 350 239 80 35 chr18 368624 368737 -86308811 + LTR35 LTR ERV1 1 118 -500 346 253 11 11 chr18 368864 368955 -86308593 + LTR58 LTR ERV1 350 440 -239 490 250 52 0 chr18 369115 369231 -86308317 + LTR35 LTR ERV1 495 616 -2 619 159 44 9 chr18 369233 369346 -86308202 + MLT1C LTR MaLR 351 467 0 1146 38 0 0 chr18 371491 371623 -86305925 - AluY SINE Alu -179 132 1 2101 77 7 27 chr18 371810 372109 -86305439 + AluY SINE Alu 1 293 -18 1755 116 109 7 chr18 372129 372404 -86305144 + AluSg SINE Alu 1 303 -7 21 0 0 0 chr18 372432 372453 -86305095 + AT_rich Low_complexity Low_complexity 1 21 0 1150 228 16 20 chr18 372586 373105 -86304443 + TAR1 Satellite telomeric 1 516 -1345 1056 235 28 11 chr18 373122 373407 -86304141 + TAR1 Satellite telomeric 1759 2048 -63 226 250 88 37 chr18 374460 374596 -86302952 - L1 LINE L1 -2196 3950 3808 302 242 0 0 chr18 374598 374664 -86302884 - Charlie1 DNA MER1_type -2 2759 2694 13433 142 51 19 chr18 374679 375056 -86302492 + Tigger1 DNA MER2_type 22 386 -2032 1951 105 11 14 chr18 375056 375371 -86302177 + AluSx SINE Alu 1 314 0 13433 142 51 19 chr18 375371 375757 -86301791 + Tigger1 DNA MER2_type 386 758 -1660 1988 97 20 17 chr18 375757 376056 -86301492 + L1PA10 LINE L1 5859 6158 -10 207 0 0 0 chr18 376058 376081 -86301467 + (TA)n Simple_repeat Simple_repeat 1 23 0 13433 142 51 19 chr18 376081 376983 -86300565 + Tigger1 DNA MER2_type 758 1788 -630 1835 168 10 0 chr18 376983 377287 -86300261 + AluJo SINE Alu 1 307 -5 13433 142 51 19 chr18 377287 377939 -86299609 + Tigger1 DNA MER2_type 1788 2418 0 3792 224 129 70 chr18 377959 378131 -86299417 - L1M4 LINE L1 -966 5180 5020 2295 56 3 13 chr18 378131 378434 -86299114 - AluY SINE Alu -11 300 1 3792 224 129 70 chr18 378434 378445 -86299103 - L1M4 LINE L1 -1126 5020 5011 2048 76 10 47 chr18 378445 378746 -86298802 - AluSp SINE Alu -23 290 1 3792 224 129 70 chr18 378746 379282 -86298266 - L1M4 LINE L1 -1135 5011 4508 2059 125 7 0 chr18 379282 379586 -86297962 - AluSx SINE Alu -6 306 1 3792 224 129 70 chr18 379586 379627 -86297921 - L1M4 LINE L1 -1638 4508 4471 969 180 31 0 chr18 379627 379788 -86297760 - AluJo/FRAM SINE Alu 0 302 137 1795 149 10 13 chr18 379791 380092 -86297456 - AluJb SINE Alu -12 300 1 3792 224 129 70 chr18 380092 381251 -86296297 - L1M4 LINE L1 -1676 4470 3140 32 43 0 0 chr18 381254 381300 -86296248 + AT_rich Low_complexity Low_complexity 1 46 0 698 220 0 0 chr18 381339 381471 -86296077 - FLAM_A SINE Alu -1 132 1 398 279 213 35 chr18 381533 381909 -86295639 - L1 LINE L1 -819 5327 4885 448 260 237 33 chr18 381941 382245 -86295303 - L1 LINE L1 -1446 4700 4335 930 196 0 0 chr18 382292 382465 -86295083 + FRAM SINE Alu 1 170 -6 252 0 0 0 chr18 383029 383057 -86294491 + (TTTG)n Simple_repeat Simple_repeat 3 30 0 1597 169 18 3 chr18 383060 383344 -86294204 - AluJb SINE Alu -24 288 1 625 228 27 0 chr18 383483 383632 -86293916 - L1ME1 LINE L1 -5 6161 6009 932 199 112 17 chr18 383670 383911 -86293637 - L1MB7 LINE L1 -54 6130 5867 1096 92 2 6 chr18 384604 390576 -86286972 + BSR/Beta Satellite Satellite 1 5952 -42 872 118 0 6 chr18 390579 390748 -86286800 + (TTAGGG)n Simple_repeat Simple_repeat 5 172 0 229 118 0 0 chr18 390750 390784 -86286764 + TAR1 Satellite telomeric 2078 2111 0 1252 52 7 18 chr18 390785 391056 -86286492 + (TTAGGG)n Simple_repeat Simple_repeat 1 268 0 22 35 0 0 chr18 391074 391103 -86286445 + AT_rich Low_complexity Low_complexity 1 29 0 322 308 74 17 chr18 391331 391518 -86286030 - MIR SINE MIR -6 256 55 190 389 49 23 chr18 391836 392142 -86285406 - L2 LINE L2 -128 3144 2831 2262 86 0 3 chr18 392231 392534 -86285014 - AluY SINE Alu -9 302 1 816 279 18 0 chr18 392551 392770 -86284778 - MER58A DNA MER1_type 0 224 2 264 103 52 0 chr18 392900 392958 -86284590 + (TAGA)n Simple_repeat Simple_repeat 2 62 0 206 188 38 25 chr18 393126 393206 -86284342 + (TTTG)n Simple_repeat Simple_repeat 2 82 0 24 53 0 0 chr18 394145 394183 -86283365 + AT_rich Low_complexity Low_complexity 1 38 0 639 297 58 82 chr18 395322 395739 -86281809 - MLT1I LTR MaLR 0 409 3 312 272 0 17 chr18 395986 396166 -86281382 + (TTAGGG)n Simple_repeat Simple_repeat 3 179 0 1563 166 8 35 chr18 396861 397216 -86280332 - MER4A LTR ERV1 0 664 261 657 141 8 39 chr18 397187 397315 -86280233 - MER4A LTR ERV1 -540 124 1 * 312 48 0 0 chr18 397456 397498 -86280050 + (TTAGGG)n Simple_repeat Simple_repeat 1 42 0 222 200 36 18 chr18 397569 397624 -86279924 + (TTAGGG)n Simple_repeat Simple_repeat 2 57 0 1137 165 96 120 chr18 397668 398075 -86279473 + LTR60 LTR ERV1 151 547 -39 * 2259 125 27 54 chr18 397929 398337 -86279211 + TAR1 Satellite telomeric 4 400 -1711 338 216 18 63 chr18 398495 398606 -86278942 + MIR SINE MIR 18 123 -85 1671 103 4 0 chr18 398751 398983 -86278565 - AluSx SINE Alu -79 233 1 1975 131 3 10 chr18 399216 399529 -86278019 - AluJb SINE Alu 0 312 2 229 211 0 19 chr18 399569 399621 -86277927 + L2 LINE L2 3263 3313 0 1558 175 18 0 chr18 399636 399916 -86277632 - AluJb SINE Alu -16 296 12 264 122 0 0 chr18 399919 399960 -86277588 + (TCC)n Simple_repeat Simple_repeat 3 43 0 1688 172 16 3 chr18 399964 400272 -86277276 - AluSx SINE Alu 0 312 1 374 267 109 36 chr18 400378 400543 -86277005 - L2 LINE L2 -3 3310 3134 1978 107 0 57 chr18 400633 400950 -86276598 + AluSx SINE Alu 14 312 0 1387 186 54 11 chr18 401236 401392 -86276156 - AluJo SINE Alu -21 291 116 261 0 0 0 chr18 401392 401421 -86276127 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1387 186 54 11 chr18 401421 401543 -86276005 - AluJo SINE Alu -196 116 1 271 256 33 74 chr18 401822 401943 -86275605 - MIR SINE MIR -58 204 89 484 312 49 49 chr18 401992 402258 -86275290 + MLT1J LTR MaLR 3 268 -243 305 258 274 16 chr18 402336 402460 -86275088 + MER5A DNA MER1_type 34 189 0 1964 113 3 3 chr18 402583 402910 -86274638 + AluSp SINE Alu 1 327 0 1519 162 14 41 chr18 403036 403326 -86274222 - AluJo SINE Alu -30 282 1 476 156 11 0 chr18 403380 403470 -86274078 + (TG)n Simple_repeat Simple_repeat 2 92 0 2017 109 11 0 chr18 403496 403781 -86273767 - AluSx SINE Alu -23 289 2 1960 138 0 3 chr18 403814 404118 -86273430 - AluSx SINE Alu -7 305 3 2082 186 72 39 chr18 404243 404563 -86272985 + MLT1D LTR MaLR 3 346 -159 2142 109 3 0 chr18 404563 404865 -86272683 + AluSx SINE Alu 1 303 -9 2082 186 72 39 chr18 404865 405027 -86272521 + MLT1D LTR MaLR 346 501 -4 1801 161 10 3 chr18 405745 406055 -86271493 + AluSx SINE Alu 1 312 0 1734 172 3 3 chr18 406186 406494 -86271054 - AluJb SINE Alu -2 310 3 276 253 157 0 chr18 406654 406737 -86270811 - MIR SINE MIR -31 231 136 3649 116 39 32 chr18 406737 406884 -86270664 - Tigger1 DNA MER2_type 0 2418 2274 1792 133 60 11 chr18 406884 407169 -86270379 + AluJb SINE Alu 1 299 -13 3649 116 39 32 chr18 407169 407739 -86269809 - Tigger1 DNA MER2_type -144 2274 1668 866 175 122 0 chr18 407741 407930 -86269618 - Tigger1 DNA MER2_type -2073 345 134 227 224 103 0 chr18 408935 408993 -86268555 + MIR3 SINE MIR 125 188 -20 2166 103 3 7 chr18 409106 409408 -86268140 + AluSq SINE Alu 3 303 -10 928 172 0 6 chr18 409460 409617 -86267931 + FRAM SINE Alu 1 156 -10 197 305 156 23 chr18 409643 409771 -86267777 - MIR SINE MIR -51 211 67 210 364 72 66 chr18 409783 410000 -86267548 + L2 LINE L2 2563 2777 -495 2141 116 0 0 chr18 410000 410311 -86267237 - AluSq SINE Alu 0 311 1 210 364 72 66 chr18 410311 410587 -86266961 + L2 LINE L2 2777 3056 -216 535 192 17 0 chr18 410938 411058 -86266490 - L1MB3 LINE L1 -2 6181 6060 389 149 14 0 chr18 411059 411133 -86266415 - L1MB3 LINE L1 -189 5982 5908 * 1595 155 52 13 chr18 411123 411513 -86266035 - L1MB3 LINE L1 -305 5857 5426 255 259 122 122 chr18 411801 411882 -86265666 + MIR3 SINE MIR 30 113 -95 2070 79 72 4 chr18 411882 412160 -86265388 - AluSg SINE Alu -13 297 1 255 259 122 122 chr18 412160 412209 -86265339 + MIR3 SINE MIR 112 160 -48 22 0 0 0 chr18 412354 412376 -86265172 + AT_rich Low_complexity Low_complexity 1 22 0 1860 133 31 51 chr18 412774 413128 -86264420 - L1PA15 LINE L1 0 6165 5819 21 0 0 0 chr18 413137 413158 -86264390 + AT_rich Low_complexity Low_complexity 1 21 0 2277 106 3 0 chr18 413535 413837 -86263711 - AluSx SINE Alu -9 303 1 1913 107 14 14 chr18 414040 414330 -86263218 - AluSx SINE Alu -22 290 1 196 216 276 67 chr18 414609 414743 -86262805 - MIR SINE MIR -2 260 99 21 0 0 78 chr18 415409 415420 -86262128 + AT_rich Low_complexity Low_complexity 1 11 -36 2179 131 0 0 chr18 415420 415717 -86261831 - AluSx SINE Alu -15 297 1 21 0 0 78 chr18 415717 415756 -86261792 + AT_rich Low_complexity Low_complexity 11 47 0 600 224 94 15 chr18 415972 416173 -86261375 - L1M4 LINE L1 -1199 4947 4731 1119 62 0 170 chr18 416174 416368 -86261180 + AluSc SINE Alu 127 287 -22 831 243 41 69 chr18 416420 416595 -86260953 - L1M4 LINE L1 -1537 4609 4431 1716 163 7 36 chr18 416595 416896 -86260652 - AluJo SINE Alu -20 292 1 831 243 41 69 chr18 416896 417004 -86260544 - L1M4 LINE L1 -1715 4431 4322 2332 83 40 0 chr18 417004 417305 -86260243 - AluSp SINE Alu 0 313 1 831 243 41 69 chr18 417305 417486 -86260062 - L1M4 LINE L1 -1824 4322 4157 2080 143 0 0 chr18 417521 417814 -86259734 - AluSx SINE Alu -19 293 1 2283 77 3 23 chr18 417870 418169 -86259379 + AluY SINE Alu 1 293 -18 1873 114 110 7 chr18 418189 418462 -86259086 + AluSg SINE Alu 1 301 -9 1754 182 0 42 chr18 418569 418882 -86258666 - AluJo SINE Alu -12 300 1 1426 208 34 23 chr18 419389 419773 -86257775 - L1MB8 LINE L1 0 6178 5791 263 247 14 14 chr18 419764 419837 -86257711 - L1M4 LINE L1 -321 5863 5791 * 308 206 14 14 chr18 419828 419901 -86257647 - L1MB5 LINE L1 -311 5863 5791 293 219 14 14 chr18 419892 419965 -86257583 - L1M4 LINE L1 -311 5863 5791 * 293 219 14 14 chr18 419956 420029 -86257519 - L1M4 LINE L1 -321 5863 5791 449 245 50 30 chr18 419996 420026 -86257522 - L1PA7 LINE L1 -262 5892 5863 1794 178 79 63 chr18 420026 421075 -86256473 - L1ME1 LINE L1 -312 5854 4777 208 312 40 75 chr18 421782 421981 -86255567 - L2 LINE L2 -404 2910 2719 336 244 119 81 chr18 422094 422463 -86255085 - HAL1 LINE L1 -860 1647 1265 468 313 159 31 chr18 422476 422828 -86254720 - HAL1 LINE L1 -1283 1224 828 1806 149 6 51 chr18 423455 423771 -86253777 + AluJb SINE Alu 3 304 -8 1945 153 16 0 chr18 424129 424436 -86253112 - AluSx SINE Alu 0 312 1 28 0 0 0 chr18 424656 424684 -86252864 + AT_rich Low_complexity Low_complexity 1 28 0 1620 174 13 27 chr18 424684 424982 -86252566 - AluJo SINE Alu -17 295 2 1548 186 28 14 chr18 425161 425446 -86252102 + AluJo SINE Alu 1 289 -23 2210 108 3 0 chr18 425452 425749 -86251799 + AluSx SINE Alu 1 298 -14 21 36 0 0 chr18 426048 426076 -86251472 + AT_rich Low_complexity Low_complexity 1 28 0 256 283 33 0 chr18 426488 426580 -86250968 - L1ME1 LINE L1 -1577 4569 4475 419 300 150 12 chr18 426920 427167 -86250381 - L1ME1 LINE L1 -1902 4244 3964 378 298 154 47 chr18 427177 427476 -86250072 - L1ME1 LINE L1 -2126 4020 3690 2229 81 0 3 chr18 427651 427960 -86249588 - AluSx SINE Alu 0 308 1 499 263 80 73 chr18 427974 428301 -86249247 - L1ME1 LINE L1 -2742 3404 3076 2267 108 3 0 chr18 428453 428760 -86248788 - AluSc SINE Alu 0 309 2 1264 229 69 91 chr18 428774 429443 -86248105 - L1ME3A LINE L1 -11 6159 5506 934 206 59 62 chr18 430393 430733 -86246815 - L1ME2 LINE L1 -2 6162 5824 298 204 0 91 chr18 430728 430816 -86246732 - L1ME3A LINE L1 -2516 5526 5447 * 409 279 27 0 chr18 431007 431118 -86246430 - MIR3 SINE MIR -23 185 72 2299 117 0 3 chr18 431263 431570 -86245978 + AluSq SINE Alu 1 306 -7 3294 186 36 12 chr18 432410 433136 -86244412 - L1MB8 LINE L1 -5 6173 5431 821 194 177 84 chr18 433411 433630 -86243918 - L1MC4 LINE L1 0 8042 7845 2177 123 0 0 chr18 433630 433922 -86243626 + AluSx SINE Alu 1 292 -20 821 194 177 84 chr18 433922 434152 -86243396 - L1MC4 LINE L1 -197 7845 7470 21 0 0 0 chr18 434227 434248 -86243300 + AT_rich Low_complexity Low_complexity 1 21 0 1458 71 0 16 chr18 435022 435205 -86242343 + AluSg SINE Alu 1 180 -130 349 130 0 0 chr18 435205 435259 -86242289 - AluSg/x SINE Alu -89 211 158 1861 85 0 35 chr18 435259 435519 -86242029 + AluSg SINE Alu 44 294 -16 711 301 140 10 chr18 435851 436359 -86241189 + L2 LINE L2 2578 3164 -149 21 0 0 0 chr18 436722 436743 -86240805 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 436844 436872 -86240676 + AT_rich Low_complexity Low_complexity 1 28 0 1839 127 72 4 chr18 437224 437500 -86240048 - AluSq SINE Alu -18 295 1 27 0 0 0 chr18 437607 437634 -86239914 + AT_rich Low_complexity Low_complexity 1 27 0 34 42 0 0 chr18 437738 437786 -86239762 + AT_rich Low_complexity Low_complexity 1 48 0 2493 221 70 10 chr18 438311 438927 -86238621 - MER82 DNA MER2_type 0 653 1 216 267 67 33 chr18 439178 439268 -86238280 + MIR SINE MIR 63 155 -107 408 242 89 24 chr18 439300 439424 -86238124 + MER94 DNA DNA 2 133 -1 198 0 0 0 chr18 439762 439784 -86237764 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2086 116 0 7 chr18 439797 440082 -86237466 - AluSc SINE Alu -26 283 1 364 348 88 0 chr18 441145 441326 -86236222 - MIR SINE MIR 0 262 66 259 304 31 81 chr18 442305 442466 -86235082 - MER5A DNA MER1_type -1 188 36 1939 67 47 4 chr18 442590 442843 -86234705 - AluY SINE Alu -11 300 37 1453 154 0 9 chr18 443925 444158 -86233390 - AluJb SINE Alu -81 231 1 4047 188 36 18 chr18 444317 444473 -86233075 - L1MD1 LINE L1 -148 6077 5925 1660 197 0 23 chr18 444473 444772 -86232776 + AluJo SINE Alu 1 292 -20 4047 188 36 18 chr18 444772 445599 -86231949 - L1MD1 LINE L1 -300 5925 5115 1958 120 0 4 chr18 445599 445865 -86231683 + AluSx SINE Alu 1 265 -47 4047 188 36 18 chr18 445865 446403 -86231145 - L1MD1 LINE L1 -1110 5115 4520 1706 182 0 0 chr18 446403 446672 -86230876 + AluJb SINE Alu 26 294 -18 4047 188 36 18 chr18 446672 446939 -86230609 - L1MD1 LINE L1 -1705 4520 4259 629 219 229 76 chr18 446960 447063 -86230485 - L1MD1 LINE L1 -2545 3584 3498 234 81 0 0 chr18 447063 447100 -86230448 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 629 219 229 76 chr18 447100 447708 -86229840 - L1MD1 LINE L1 -2631 3498 2764 1809 119 0 0 chr18 447730 447982 -86229566 - AluSx SINE Alu -15 297 46 21 0 0 0 chr18 448002 448023 -86229525 + AT_rich Low_complexity Low_complexity 1 21 0 553 183 193 5 chr18 448035 448232 -86229316 - L1MD1 LINE L1 -3983 2146 1913 884 228 76 9 chr18 449546 450001 -86227547 - Charlie1b DNA MER1_type -2 521 1 22 0 0 0 chr18 450998 451020 -86226528 + AT_rich Low_complexity Low_complexity 1 22 0 2189 112 17 0 chr18 451306 451601 -86225947 + AluSx SINE Alu 1 300 -12 284 0 0 27 chr18 452945 452982 -86224566 + (TAGA)n Simple_repeat Simple_repeat 2 37 0 342 273 25 68 chr18 453000 453161 -86224387 - MER58A DNA MER1_type -33 191 38 2266 75 4 4 chr18 454948 455229 -86222319 - AluSc SINE Alu -24 285 5 317 299 216 11 chr18 456756 457061 -86220487 - L2 LINE L2 -321 2992 2611 630 229 110 32 chr18 457097 457315 -86220233 - MIR SINE MIR -16 246 12 328 258 110 67 chr18 457327 457626 -86219922 - L2 LINE L2 -1102 2212 1901 229 239 149 15 chr18 459076 459210 -86218338 - L1ME LINE L1 -361 5801 5650 372 181 256 88 chr18 459215 459430 -86218118 + MER112 DNA MER1_type 5 255 -1 623 218 135 18 chr18 459781 460107 -86217441 - L1M4 LINE L1 -2920 3226 2863 371 259 103 46 chr18 460407 460590 -86216958 - L1M4 LINE L1 -3732 2414 2210 2590 53 0 0 chr18 460590 460891 -86216657 - AluY SINE Alu -10 301 1 371 259 103 46 chr18 460891 460970 -86216578 - L1M4 LINE L1 -3936 2210 2137 365 267 73 6 chr18 461444 461609 -86215939 + L1MEd LINE L1 897 1072 -5047 414 298 208 18 chr18 461690 462079 -86215469 - L1MD1 LINE L1 -4837 1473 955 259 265 216 38 chr18 462101 462286 -86215262 - L1MD1 LINE L1 -5855 264 47 2340 97 0 0 chr18 463280 463578 -86213970 + AluSx SINE Alu 1 298 -14 198 256 325 0 chr18 464895 465055 -86212493 - MIR SINE MIR -47 215 4 192 211 0 0 chr18 465079 465117 -86212431 - MIR SINE MIR -1 261 224 696 178 8 31 chr18 466178 466307 -86211241 + FLAM_A SINE Alu 1 126 -7 186 307 105 43 chr18 467095 467352 -86210196 + L2 LINE L2 717 989 -2325 413 168 20 69 chr18 467388 467489 -86210059 - MER58 DNA MER1_type -1 2419 2324 310 250 0 0 chr18 467537 467593 -86209955 - MER58 DNA MER1_type -330 56 1 1005 328 148 48 chr18 467593 468382 -86209166 + L2 LINE L2 1018 1727 -1587 2009 110 0 11 chr18 468382 468664 -86208884 + AluSg SINE Alu 1 279 -31 1005 328 148 48 chr18 468664 469193 -86208355 + L2 LINE L2 1727 2467 -847 199 333 156 28 chr18 469159 469339 -86208209 - L2 LINE L2 -204 3068 2866 * 458 301 23 8 chr18 469476 469609 -86207939 - MIR3 SINE MIR -21 187 53 1556 168 3 56 chr18 469730 470034 -86207514 - AluJo SINE Alu -24 288 1 600 229 0 0 chr18 470121 470230 -86207318 - FLAM_A SINE Alu -33 109 1 21 36 0 0 chr18 470515 470543 -86207005 + AT_rich Low_complexity Low_complexity 1 28 0 857 188 40 74 chr18 470918 471077 -86206471 - MER58A DNA MER1_type -2196 224 72 1689 172 24 7 chr18 471077 471373 -86206175 - AluJo SINE Alu -11 301 1 857 188 40 74 chr18 471373 471415 -86206133 - MER58A DNA MER1_type -2348 72 30 461 280 126 5 chr18 471627 471839 -86205709 - L1ME LINE L1 -559 5603 5367 1449 285 129 56 chr18 471914 472287 -86205261 - L1ME LINE L1 -877 5269 4924 2232 107 10 0 chr18 472287 472587 -86204961 + AluSp SINE Alu 1 303 -10 1449 285 129 56 chr18 472587 473527 -86204021 - L1ME LINE L1 -1222 4924 4054 864 109 0 29 chr18 473527 473664 -86203884 - FLAM_C SINE Alu 0 133 1 1449 285 129 56 chr18 473664 475149 -86202399 - L1ME LINE L1 -2092 4054 2267 204 40 0 0 chr18 475330 475355 -86202193 + (T)n Simple_repeat Simple_repeat 1 25 0 8738 143 47 9 chr18 475464 476323 -86201225 + Tigger1 DNA MER2_type 848 1791 -627 1948 164 10 0 chr18 476323 476627 -86200921 + AluJo SINE Alu 1 307 -5 8738 143 47 9 chr18 476627 477280 -86200268 + Tigger1 DNA MER2_type 1791 2418 0 3679 228 128 71 chr18 477300 477472 -86200076 - L1M4 LINE L1 -966 5180 5019 2386 59 3 13 chr18 477472 477775 -86199773 - AluY SINE Alu -11 300 1 3679 228 128 71 chr18 477775 477786 -86199762 - L1M4 LINE L1 -1127 5019 5010 2161 70 10 47 chr18 477786 478085 -86199463 - AluSp SINE Alu -23 290 3 3679 228 128 71 chr18 478085 478623 -86198925 - L1M4 LINE L1 -1136 5010 4504 2181 124 7 0 chr18 478623 478930 -86198618 - AluSx SINE Alu -3 309 1 3679 228 128 71 chr18 478930 478974 -86198574 - L1M4 LINE L1 -1642 4504 4464 955 176 31 0 chr18 478974 479133 -86198415 - AluJo/FRAM SINE Alu -2 300 137 1896 149 10 13 chr18 479136 479437 -86198111 - AluJb SINE Alu -12 300 1 3679 228 128 71 chr18 479437 480596 -86196952 - L1M4 LINE L1 -1683 4463 3140 32 43 0 0 chr18 480599 480645 -86196903 + AT_rich Low_complexity Low_complexity 1 46 0 684 220 0 0 chr18 480684 480816 -86196732 - FLAM_A SINE Alu -1 132 1 313 293 138 27 chr18 481066 481254 -86196294 - L1 LINE L1 -1053 5093 4885 320 276 234 30 chr18 481286 481590 -86195958 - L1 LINE L1 -1446 4700 4335 973 195 0 0 chr18 481640 481809 -86195739 + FRAM SINE Alu 1 169 -7 216 0 0 0 chr18 482370 482394 -86195154 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 1686 167 18 3 chr18 482397 482679 -86194869 - AluJb SINE Alu -24 288 3 614 232 26 4 chr18 482820 482994 -86194554 - L1ME1 LINE L1 -5 6161 5986 936 204 94 17 chr18 483013 483248 -86194300 - L1MB7 LINE L1 -65 6119 5867 1786 174 0 46 chr18 483939 484266 -86193282 - AluJo SINE Alu 0 312 1 1539 208 34 23 chr18 484773 485157 -86192391 - L1MB8 LINE L1 0 6178 5791 282 247 14 14 chr18 485148 485221 -86192327 - L1MB7 LINE L1 -321 5863 5791 * 329 206 14 14 chr18 485212 485285 -86192263 - L1ME1 LINE L1 -311 5863 5791 289 221 15 15 chr18 485276 485344 -86192204 - L1M4 LINE L1 -311 5863 5796 * 314 206 14 14 chr18 485340 485413 -86192135 - L1MB5 LINE L1 -311 5863 5791 * 329 206 14 14 chr18 485404 485477 -86192071 - L1MB5 LINE L1 -311 5863 5791 313 219 14 14 chr18 485468 485541 -86192007 - L1MB5 LINE L1 -311 5863 5791 551 240 45 25 chr18 485508 485538 -86192010 - L1PA10 LINE L1 -276 5892 5863 1953 179 79 63 chr18 485538 486589 -86190959 - L1ME1 LINE L1 -312 5854 4775 198 312 40 75 chr18 487294 487493 -86190055 - L2 LINE L2 -404 2910 2719 434 247 122 84 chr18 487606 487975 -86189573 - HAL1 LINE L1 -860 1647 1265 468 313 159 31 chr18 487988 488340 -86189208 - HAL1 LINE L1 -1283 1224 828 1783 149 6 51 chr18 488967 489283 -86188265 + AluJb SINE Alu 3 304 -8 1918 153 16 0 chr18 489642 489949 -86187599 - AluSx SINE Alu 0 312 1 28 0 0 0 chr18 490169 490197 -86187351 + AT_rich Low_complexity Low_complexity 1 28 0 1605 174 13 27 chr18 490197 490495 -86187053 - AluJo SINE Alu -17 295 2 1487 189 28 14 chr18 490674 490959 -86186589 + AluJo SINE Alu 1 289 -23 2197 108 3 0 chr18 490965 491262 -86186286 + AluSx SINE Alu 1 298 -14 21 36 0 0 chr18 491561 491589 -86185959 + AT_rich Low_complexity Low_complexity 1 28 0 285 287 32 0 chr18 491999 492093 -86185455 - L1ME1 LINE L1 -1575 4571 4475 230 252 123 39 chr18 492496 492651 -86184897 - L1ME1 LINE L1 -1980 4166 3999 376 305 116 81 chr18 492690 493060 -86184488 - L1ME1 LINE L1 -2126 4020 3638 2232 81 0 3 chr18 493164 493473 -86184075 - AluSx SINE Alu 0 308 1 500 263 80 73 chr18 493487 493814 -86183734 - L1ME1 LINE L1 -2742 3404 3076 2307 101 3 0 chr18 493966 494273 -86183275 - AluSc SINE Alu 0 309 2 1450 224 71 93 chr18 494287 494961 -86182587 - L1ME3A LINE L1 -11 6159 5501 1027 206 59 62 chr18 495906 496246 -86181302 - L1ME2 LINE L1 -2 6162 5824 323 204 0 91 chr18 496241 496329 -86181219 - L1ME3A LINE L1 -2469 5526 5447 * 413 279 27 0 chr18 496520 496631 -86180917 - MIR3 SINE MIR -23 185 72 2276 117 0 3 chr18 496776 497083 -86180465 + AluSq SINE Alu 1 306 -7 3342 186 36 12 chr18 497923 498649 -86178899 - L1MB8 LINE L1 -5 6173 5431 938 194 177 84 chr18 498924 499143 -86178405 - L1MC4 LINE L1 0 8042 7845 2160 123 0 0 chr18 499143 499435 -86178113 + AluSx SINE Alu 1 292 -20 938 194 177 84 chr18 499435 499665 -86177883 - L1MC4 LINE L1 -197 7845 7470 21 0 0 0 chr18 499740 499761 -86177787 + AT_rich Low_complexity Low_complexity 1 21 0 1449 77 0 16 chr18 500538 500721 -86176827 + AluSg SINE Alu 1 180 -130 370 130 0 0 chr18 500721 500775 -86176773 - AluSp/q SINE Alu -90 213 160 1878 81 0 35 chr18 500775 501035 -86176513 + AluSg SINE Alu 44 294 -16 688 302 139 10 chr18 501366 501875 -86175673 + L2 LINE L2 2578 3164 -149 21 0 0 0 chr18 502238 502259 -86175289 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 502360 502388 -86175160 + AT_rich Low_complexity Low_complexity 1 28 0 1816 127 72 4 chr18 502740 503016 -86174532 - AluSq SINE Alu -18 295 1 27 0 0 0 chr18 503123 503150 -86174398 + AT_rich Low_complexity Low_complexity 1 27 0 34 42 0 0 chr18 503254 503302 -86174246 + AT_rich Low_complexity Low_complexity 1 48 0 2666 222 70 10 chr18 503827 504443 -86173105 - MER82 DNA MER2_type 0 653 1 220 267 67 33 chr18 504694 504784 -86172764 + MIR SINE MIR 63 155 -107 422 234 89 24 chr18 504816 504940 -86172608 + MER94 DNA DNA 2 133 -1 198 0 0 0 chr18 505278 505300 -86172248 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2073 116 0 7 chr18 505313 505598 -86171950 - AluSc SINE Alu -26 283 1 368 348 88 0 chr18 506661 506842 -86170706 - MIR SINE MIR 0 262 66 260 304 31 81 chr18 507821 507982 -86169566 - MER5A DNA MER1_type -1 188 36 1939 67 47 4 chr18 508106 508359 -86169189 - AluY SINE Alu -11 300 37 627 203 0 43 chr18 509402 509540 -86168008 - FLAM_A SINE Alu 0 133 2 1446 154 0 9 chr18 509540 509679 -86167869 - AluJb SINE Alu -175 137 1 4122 182 39 12 chr18 509836 509994 -86167554 - L1MD1 LINE L1 -146 6490 6338 1621 197 0 23 chr18 509994 510293 -86167255 + AluJo SINE Alu 1 292 -20 4122 182 39 12 chr18 510293 511120 -86166428 - L1MD1 LINE L1 -298 6338 5473 1933 124 0 4 chr18 511120 511386 -86166162 + AluSx SINE Alu 1 265 -47 4122 182 39 12 chr18 511386 511534 -86166014 - L1MD1 LINE L1 -1163 5473 5330 1039 171 24 16 chr18 511533 511784 -86165764 - L1MD1 LINE L1 -1618 4922 4670 * 739 215 94 104 chr18 511805 511908 -86165640 - L1MD1 LINE L1 -2545 3995 3892 234 81 0 0 chr18 511908 511945 -86165603 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 739 215 94 104 chr18 511945 512343 -86165205 - L1MD1 LINE L1 -2648 3892 3499 523 232 116 10 chr18 512346 512553 -86164995 - L1MD1 LINE L1 -3137 3403 3175 1791 123 0 0 chr18 512575 512827 -86164721 - AluSx SINE Alu -15 297 46 21 0 0 0 chr18 512847 512868 -86164680 + AT_rich Low_complexity Low_complexity 1 21 0 588 179 199 5 chr18 512880 513076 -86164472 - L1MD1 LINE L1 -3983 2557 2324 974 228 76 9 chr18 514390 514845 -86162703 - Charlie1b DNA MER1_type -2 521 1 22 0 0 0 chr18 515842 515864 -86161684 + AT_rich Low_complexity Low_complexity 1 22 0 2165 112 17 0 chr18 516148 516443 -86161105 + AluSx SINE Alu 1 300 -12 284 0 0 27 chr18 517789 517826 -86159722 + (TAGA)n Simple_repeat Simple_repeat 2 37 0 415 286 25 43 chr18 517848 518009 -86159539 - MER58A DNA MER1_type -33 191 34 2266 75 4 4 chr18 519795 520076 -86157472 - AluSc SINE Alu -24 285 5 300 299 227 22 chr18 521603 521908 -86155640 - L2 LINE L2 -321 2992 2611 616 229 110 32 chr18 521944 522162 -86155386 - MIR SINE MIR -16 246 12 322 264 107 63 chr18 522174 522473 -86155075 - L2 LINE L2 -1102 2212 1901 229 239 149 15 chr18 524112 524246 -86153302 - L1ME LINE L1 -361 5784 5633 372 181 256 88 chr18 524251 524466 -86153082 + MER112 DNA MER1_type 5 255 -1 305 292 130 7 chr18 524595 524749 -86152799 - L1ME LINE L1 -2329 5462 5290 591 221 135 18 chr18 524817 525143 -86152405 - L1ME LINE L1 -2920 3209 2846 371 259 103 46 chr18 525443 525626 -86151922 - L1ME LINE L1 -3732 2397 2193 2563 60 0 0 chr18 525626 525927 -86151621 - AluY SINE Alu -10 301 1 371 259 103 46 chr18 525927 526006 -86151542 - L1ME LINE L1 -3936 2193 2120 365 267 73 6 chr18 526480 526645 -86150903 + L1MEd LINE L1 897 1072 -5047 414 298 208 18 chr18 526726 527115 -86150433 - L1MEd LINE L1 -4837 1473 955 2285 109 0 0 chr18 528316 528619 -86148929 + AluSx SINE Alu 1 303 -9 198 256 325 0 chr18 529931 530091 -86147457 - MIR SINE MIR -47 215 4 192 211 0 0 chr18 530115 530153 -86147395 - MIR SINE MIR -1 261 224 696 178 8 31 chr18 531215 531344 -86146204 + FLAM_A SINE Alu 1 126 -7 220 205 295 27 chr18 531580 531692 -86145856 - L3 LINE CR1 -6 1571 1430 413 168 20 69 chr18 532428 532529 -86145019 - MER58 DNA MER1_type -1 2419 2324 310 250 0 0 chr18 532577 532633 -86144915 - MER58 DNA MER1_type -285 56 1 1019 327 148 48 chr18 532633 533422 -86144126 + L2 LINE L2 1018 1727 -1587 2015 110 0 7 chr18 533422 533703 -86143845 + AluSg SINE Alu 1 279 -31 1019 327 148 48 chr18 533703 534232 -86143316 + L2 LINE L2 1727 2467 -847 199 333 156 28 chr18 534198 534378 -86143170 - L2 LINE L2 -204 3068 2866 * 458 301 23 8 chr18 534515 534648 -86142900 - MIR3 SINE MIR -21 187 53 1556 168 3 56 chr18 534769 535073 -86142475 - AluJo SINE Alu -24 288 1 600 229 0 0 chr18 535160 535269 -86142279 - FLAM_A SINE Alu -33 109 1 21 36 0 0 chr18 535554 535582 -86141966 + AT_rich Low_complexity Low_complexity 1 28 0 857 188 40 74 chr18 535957 536116 -86141432 - MER58A DNA MER1_type -2196 224 72 1666 176 24 7 chr18 536116 536412 -86141136 - AluJo SINE Alu -11 301 1 857 188 40 74 chr18 536412 536454 -86141094 - MER58A DNA MER1_type -2348 72 30 534 275 110 5 chr18 536666 536881 -86140667 - L1ME LINE L1 -559 5603 5367 1367 284 129 58 chr18 536956 537329 -86140219 - L1ME LINE L1 -877 5269 4924 2216 110 10 0 chr18 537329 537629 -86139919 + AluSp SINE Alu 1 303 -10 1367 284 129 58 chr18 537629 538569 -86138979 - L1ME LINE L1 -1222 4924 4052 864 109 0 29 chr18 538569 538706 -86138842 - FLAM_C SINE Alu 0 133 1 1367 284 129 58 chr18 538706 540195 -86137353 - L1ME LINE L1 -2094 4052 2267 2508 22 0 35 chr18 540376 540692 -86136856 - AluY SINE Alu -5 306 2 2186 128 10 0 chr18 541188 541486 -86136062 - AluSx SINE Alu -11 301 1 2036 132 7 3 chr18 541899 542195 -86135353 - AluSx SINE Alu -15 297 1 1766 142 54 42 chr18 542425 542757 -86134791 - MER7A DNA MER2_type -5 341 8 22 35 0 0 chr18 542814 542843 -86134705 + AT_rich Low_complexity Low_complexity 1 29 0 2101 132 3 3 chr18 543324 543634 -86133914 - AluSx SINE Alu -2 310 1 3594 91 4 17 chr18 544669 545152 -86132396 - MER1A DNA MER1_type 0 529 53 1684 123 0 4 chr18 546224 546460 -86131088 + AluSq SINE Alu 1 235 -78 892 102 0 0 chr18 547458 547576 -86129972 + AluSg/x SINE Alu 174 291 -21 34 0 0 0 chr18 548227 548261 -86129287 + AT_rich Low_complexity Low_complexity 1 34 0 478 295 85 42 chr18 548330 549101 -86128447 - L1MEd LINE L1 -738 1752 852 21 71 0 0 chr18 549945 549987 -86127561 + AT_rich Low_complexity Low_complexity 1 42 0 1566 108 0 0 chr18 550724 550938 -86126610 + AluSq SINE Alu 1 214 -99 180 0 0 0 chr18 550946 550966 -86126582 + (A)n Simple_repeat Simple_repeat 1 20 0 889 251 68 0 chr18 551354 551561 -86125987 - MER58A DNA MER1_type -3 221 1 22 0 0 0 chr18 551720 551742 -86125806 + AT_rich Low_complexity Low_complexity 1 22 0 1136 286 88 21 chr18 552193 552581 -86124967 + MLT1J LTR MaLR 60 473 -38 2224 97 7 0 chr18 552789 553079 -86124469 - AluY SINE Alu -19 292 1 2252 98 10 0 chr18 553414 553710 -86123838 + AluSg SINE Alu 1 299 -11 25 0 0 0 chr18 554225 554250 -86123298 + AT_rich Low_complexity Low_complexity 1 25 0 419 221 25 51 chr18 554251 554409 -86123139 + L2 LINE L2 1727 1880 -1434 455 284 60 0 chr18 555152 555286 -86122262 - MIR SINE MIR -70 192 51 3442 169 24 5 chr18 555539 556124 -86121424 + MER6A DNA MER2_type 5 600 -5 722 268 35 43 chr18 556950 557325 -86120223 + L1ME4a LINE L1 5302 5664 -863 2038 128 3 16 chr18 557931 558237 -86119311 - AluJb SINE Alu -8 304 3 1349 118 50 57 chr18 558566 558828 -86118720 + Tigger1 DNA MER2_type 24 283 -2135 1351 156 0 18 chr18 558845 559063 -86118485 - AluJb SINE Alu -15 297 84 10727 110 42 55 chr18 559063 560629 -86116919 + Tigger1 DNA MER2_type 280 1875 -543 531 125 0 0 chr18 560629 560701 -86116847 - AluSp/q SINE Alu -16 297 226 10727 110 42 55 chr18 560701 561228 -86116320 + Tigger1 DNA MER2_type 1875 2407 -11 912 224 149 19 chr18 561377 561645 -86115903 + L1MC4 LINE L1 6465 6767 -1275 543 275 61 42 chr18 561666 562282 -86115266 + L1MEd LINE L1 703 1580 -910 349 45 0 0 chr18 562283 562327 -86115221 + Tigger1 DNA MER2_type 1595 1638 -780 475 260 41 7 chr18 562535 562681 -86114867 - MIR SINE MIR -8 254 104 251 252 165 39 chr18 562719 562846 -86114702 + L1ME3A LINE L1 6028 6170 0 22 0 0 0 chr18 564126 564148 -86113400 + AT_rich Low_complexity Low_complexity 1 22 0 1298 174 34 4 chr18 564550 564785 -86112763 - MIR SINE MIR -9 253 12 567 172 23 16 chr18 564787 564915 -86112633 + L1ME4a LINE L1 5787 5915 -206 377 233 47 12 chr18 565383 565469 -86112079 + L3 LINE CR1 990 1078 -499 652 283 97 17 chr18 565481 565718 -86111830 + L3 LINE CR1 1321 1576 -1 280 292 44 53 chr18 565817 565930 -86111618 - MER5A DNA MER1_type -60 129 18 185 304 80 43 chr18 566048 566186 -86111362 + L2 LINE L2 2896 3038 -234 2442 52 3 0 chr18 567117 567406 -86110142 - AluY SINE Alu -21 290 1 530 296 83 0 chr18 567697 567829 -86109719 + L2 LINE L2 3129 3271 -1 315 277 310 0 chr18 568539 568694 -86108854 - MIR SINE MIR -1 261 59 377 278 0 0 chr18 570291 570388 -86107160 + MIR SINE MIR 55 151 -57 352 191 22 67 chr18 570404 570493 -86107055 + MER5A DNA MER1_type 28 112 -77 2129 104 7 0 chr18 570567 570864 -86106684 - AluSx SINE Alu -13 299 1 314 98 20 0 chr18 571014 571065 -86106483 + (TA)n Simple_repeat Simple_repeat 1 52 0 5316 142 61 22 chr18 572952 573138 -86104410 + MER49 LTR ERV1 1 178 -745 2125 98 10 20 chr18 573138 573435 -86104113 + AluSq SINE Alu 1 294 -19 5316 142 61 22 chr18 573435 574137 -86103411 + MER49 LTR ERV1 178 923 0 1901 146 17 7 chr18 574424 574718 -86102830 - AluJo SINE Alu -15 297 1 2425 86 0 0 chr18 574983 575287 -86102261 + AluSq SINE Alu 1 304 -9 269 26 26 0 chr18 575293 575331 -86102217 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr18 575792 575813 -86101735 + AT_rich Low_complexity Low_complexity 1 21 0 2045 134 3 3 chr18 575908 576207 -86101341 + AluSx SINE Alu 1 299 -13 208 100 0 0 chr18 576348 576378 -86101170 - MIR SINE MIR -13 249 220 361 304 112 0 chr18 576589 576714 -86100834 + LTR16A1 LTR ERVL 307 445 -12 1357 233 167 27 chr18 576718 577125 -86100423 - LTR16B LTR ERVL 0 464 1 2221 117 0 0 chr18 577279 577578 -86099970 - AluSx SINE Alu -13 299 1 27 29 0 0 chr18 577582 577616 -86099932 + AT_rich Low_complexity Low_complexity 1 34 0 468 245 147 7 chr18 577632 577775 -86099773 - MIR SINE MIR -10 252 90 509 258 22 116 chr18 577826 578093 -86099455 - L2 LINE L2 -236 3077 2836 231 36 0 0 chr18 578972 579000 -86098548 + (TG)n Simple_repeat Simple_repeat 1 28 0 567 212 228 11 chr18 579120 579309 -86098239 - MER69 DNA AcHobo -27 2499 2270 830 171 16 0 chr18 579309 579438 -86098110 - AluJb SINE Alu -180 132 2 529 172 166 37 chr18 579442 579605 -86097943 - MER69 DNA AcHobo -250 2276 2093 634 184 48 0 chr18 579957 580104 -86097444 + L1MEc LINE L1 2116 2269 -4127 1390 196 0 0 chr18 580127 580398 -86097150 + L1MD3 LINE L1 7723 7993 -2 1210 179 155 0 chr18 580472 580724 -86096824 + AluJo SINE Alu 19 309 -3 6440 235 57 57 chr18 580725 581434 -86096114 + L1MEc LINE L1 2272 2980 -3235 1812 188 0 0 chr18 581434 581742 -86095806 + AluJb SINE Alu 1 308 -4 6440 235 57 57 chr18 581742 582148 -86095400 + L1MEc LINE L1 2980 3385 -2830 1716 144 43 22 chr18 582148 582425 -86095123 + AluJo SINE Alu 2 284 -28 6440 235 57 57 chr18 582425 582847 -86094701 + L1MEc LINE L1 3385 3806 -2409 2141 132 0 10 chr18 582847 583150 -86094398 + AluSx SINE Alu 1 300 -12 6440 235 57 57 chr18 583150 583641 -86093907 + L1MEc LINE L1 3806 4296 -1919 2123 106 14 3 chr18 583641 583925 -86093623 + AluSc SINE Alu 1 287 -22 6440 235 57 57 chr18 583925 584584 -86092964 + L1MEc LINE L1 4296 4961 -1254 10842 93 44 226 chr18 584602 584657 -86092891 + Tigger1 DNA MER2_type 1 64 -2354 1839 143 22 44 chr18 584657 584972 -86092576 - AluJb SINE Alu -4 308 1 10842 93 44 226 chr18 584972 585423 -86092125 + Tigger1 DNA MER2_type 64 596 -1822 870 170 7 7 chr18 585423 585570 -86091978 - FRAM SINE Alu -24 152 6 10842 93 44 226 chr18 585570 585717 -86091831 + Tigger1 DNA MER2_type 596 768 -1650 1305 174 0 25 chr18 585717 585952 -86091596 - AluJb SINE Alu 0 312 84 10842 93 44 226 chr18 585952 586895 -86090653 + Tigger1 DNA MER2_type 768 1882 -536 819 140 7 7 chr18 586895 587031 -86090517 + FLAM_C SINE Alu 3 138 -5 2472 68 7 7 chr18 587035 587342 -86090206 + AluSp SINE Alu 1 307 -6 10842 93 44 226 chr18 587342 587919 -86089629 + Tigger1 DNA MER2_type 1885 2566 148 2152 123 0 0 chr18 587919 588212 -86089336 + AluSx SINE Alu 1 293 -19 10842 93 44 226 chr18 588212 588268 -86089280 + Tigger1 DNA MER2_type 2566 2181 -237 2010 156 0 0 chr18 588268 588576 -86088972 - AluJb SINE Alu -3 309 2 10842 93 44 226 chr18 588576 588779 -86088769 + Tigger1 DNA MER2_type 2180 2418 0 769 212 55 63 chr18 588780 589035 -86088513 + L1MEc LINE L1 4978 5230 -985 * 969 272 118 28 chr18 589024 589262 -86088286 + L1MC4a LINE L1 4704 4919 -1245 2268 84 0 3 chr18 589262 589570 -86087978 + AluSq SINE Alu 1 307 0 969 272 118 28 chr18 589570 590398 -86087150 + L1MC4a LINE L1 4919 5790 -374 2336 89 0 0 chr18 591287 591579 -86085969 + AluSx SINE Alu 1 292 -20 1729 157 25 14 chr18 591788 592069 -86085479 + AluJo SINE Alu 1 284 -28 22 35 0 0 chr18 592069 592098 -86085450 + AT_rich Low_complexity Low_complexity 1 29 0 1568 156 102 0 chr18 592340 592615 -86084933 + MER7A DNA MER2_type 45 345 -1 249 351 18 30 chr18 592623 592791 -86084757 + L2 LINE L2 2857 3022 -250 1925 134 14 17 chr18 592791 593081 -86084467 + AluSx SINE Alu 1 289 -23 2602 53 0 0 chr18 593564 593863 -86083685 + AluY SINE Alu 1 299 -12 5692 44 8 0 chr18 593873 594555 -86082993 + L1PA8 LINE L1 5498 6184 0 312 305 128 37 chr18 594815 594856 -86082692 - MIR SINE MIR -6 256 220 2191 100 10 3 chr18 594856 595145 -86082403 - AluSg SINE Alu -19 291 1 312 305 128 37 chr18 595145 595290 -86082258 - MIR SINE MIR -42 220 53 362 85 0 0 chr18 595597 595644 -86081904 + MADE1 DNA Mariner 1 47 -33 3128 110 16 21 chr18 595821 596257 -86081291 + MER57B LTR ERV1 1 434 0 476 274 0 0 chr18 596309 596426 -86081122 + L2 LINE L2 3190 3306 -7 1923 137 3 31 chr18 596716 597037 -86080511 + AluJb SINE Alu 1 312 0 727 233 25 0 chr18 597137 597300 -86080248 + LTR33 LTR ERVL 1 167 -354 527 277 209 23 chr18 597761 597981 -86079567 + MIR SINE MIR 2 262 0 653 240 31 70 chr18 598108 598513 -86079035 + MLT1J1 LTR MaLR 12 441 -5 884 132 6 78 chr18 599085 599252 -86078296 - L1PA16 LINE L1 0 6166 6012 270 0 0 0 chr18 599714 599744 -86077804 + (TC)n Simple_repeat Simple_repeat 1 30 0 576 329 76 30 chr18 600494 600862 -86076686 + ERVL LTR ERVL 3720 4104 -1660 303 288 0 14 chr18 600868 600941 -86076607 + ERVL LTR ERVL 4234 4305 -1180 764 316 24 4 chr18 601032 601282 -86076266 + ERVL LTR ERVL 4552 4806 -958 2361 135 47 3 chr18 602965 603327 -86074221 + L1PB4 LINE L1 5777 6154 -2 601 226 80 147 chr18 603624 603938 -86073610 + LTR37B LTR ERV1 10 302 -166 978 161 11 6 chr18 603941 604121 -86073427 - L1MC3 LINE L1 0 7785 7605 1476 105 5 0 chr18 604144 604344 -86073204 - AluSp SINE Alu -2 311 111 1549 160 23 0 chr18 604344 604606 -86072942 - L1MC3 LINE L1 -522 7263 6996 3446 197 39 20 chr18 604615 605380 -86072168 - L1MC3 LINE L1 -207 6137 5932 393 212 0 0 chr18 605539 605605 -86071943 - AluJ/FLAM SINE Alu -236 66 1 1686 160 12 1 chr18 605605 605903 -86071645 - L1MC2 LINE L1 -322 5829 5672 651 191 7 52 chr18 606026 606162 -86071386 - FLAM_A SINE Alu -12 130 1 189 260 250 10 chr18 606552 606652 -86070896 + MIR SINE MIR 34 157 -105 2400 101 3 0 chr18 606736 607043 -86070505 - AluSq SINE Alu -5 308 1 1291 174 24 5 chr18 607099 607311 -86070237 - MER58A DNA MER1_type -6 218 3 1293 171 0 32 chr18 607465 607711 -86069837 - AluJb SINE Alu -10 302 65 218 344 44 0 chr18 607963 608053 -86069495 - MIR SINE MIR -35 227 134 1850 165 10 95 chr18 608582 608981 -86068567 - MLT1A1 LTR MaLR 0 365 1 2611 61 0 3 chr18 609683 609995 -86067553 - AluY SINE Alu 0 311 1 1177 169 134 42 chr18 610607 610920 -86066628 + MER4A LTR ERV1 1 342 -322 579 130 252 0 chr18 610973 611096 -86066452 + MER4C LTR ERV1 292 445 -20 2750 93 3 8 chr18 612145 612510 -86065038 + THE1B LTR MaLR 2 364 0 841 88 9 0 chr18 612624 612737 -86064811 + MLT1B LTR MaLR 1 114 -276 2643 128 31 5 chr18 613564 613979 -86063569 + L1PA15 LINE L1 5719 6144 -21 197 32 0 32 chr18 614016 614047 -86063501 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 691 164 17 0 chr18 614061 614209 -86063339 + FLAM_A SINE Alu 6 155 0 672 138 0 0 chr18 614716 614846 -86062702 + (TCCA)n Simple_repeat Simple_repeat 2 131 0 1358 251 105 45 chr18 615398 615611 -86061937 - LTR33 LTR ERVL -1 520 321 1460 184 4 0 chr18 615611 615866 -86061682 + AluJb SINE Alu 6 261 -51 1358 251 105 45 chr18 615866 616138 -86061410 - LTR33 LTR ERVL -200 321 6 413 273 15 8 chr18 616523 616655 -86060893 - MLT1H LTR MaLR -394 155 23 942 272 87 19 chr18 616766 617089 -86060459 + MLT1J LTR MaLR 22 366 -145 2341 83 3 3 chr18 617529 617842 -86059706 + AluSp SINE Alu 1 313 0 218 211 39 19 chr18 617842 617894 -86059654 - MIR SINE MIR -188 74 22 189 355 0 0 chr18 618256 618318 -86059230 + MIR SINE MIR 90 151 -111 402 21 0 0 chr18 619254 619301 -86058247 + (CA)n Simple_repeat Simple_repeat 1 47 0 1502 137 137 4 chr18 619351 619628 -86057920 - AluSg SINE Alu 0 311 2 1775 152 7 3 chr18 619636 619925 -86057623 - AluJb SINE Alu -22 290 1 192 320 72 10 chr18 620054 620151 -86057397 - L2 LINE L2 -218 3054 2952 255 188 87 29 chr18 620425 620494 -86057054 + MIR SINE MIR 79 151 -111 2190 100 0 7 chr18 620963 621273 -86056275 + AluSx SINE Alu 1 308 -4 617 307 74 0 chr18 621404 621606 -86055942 + MIR SINE MIR 46 262 0 2519 29 3 13 chr18 621992 622301 -86055247 - AluY SINE Alu -5 306 1 2301 92 0 0 chr18 622510 622814 -86054734 - AluSx SINE Alu -8 304 1 24 0 0 29 chr18 623340 623357 -86054191 + AT_rich Low_complexity Low_complexity 1 17 -17 246 62 0 0 chr18 623357 623389 -86054159 + (TA)n Simple_repeat Simple_repeat 2 33 0 24 0 0 29 chr18 623389 623406 -86054142 + AT_rich Low_complexity Low_complexity 17 34 0 1612 161 16 1 chr18 623738 624035 -86053513 - L1MC2 LINE L1 -322 5829 5672 609 191 7 52 chr18 624158 624294 -86053254 - FLAM_A SINE Alu -12 130 1 198 258 32 16 chr18 624722 624784 -86052764 + MIR SINE MIR 95 157 -105 2267 107 3 0 chr18 624868 625177 -86052371 - AluSq SINE Alu -3 310 1 1285 174 24 5 chr18 625233 625445 -86052103 - MER58A DNA MER1_type -6 218 3 1206 171 0 33 chr18 625599 625844 -86051704 - AluJb SINE Alu -11 301 65 235 344 44 0 chr18 626096 626186 -86051362 - MIR SINE MIR -35 227 134 1756 165 10 95 chr18 626715 627114 -86050434 - MLT1A1 LTR MaLR 0 365 1 2520 58 0 3 chr18 627817 628129 -86049419 - AluY SINE Alu 0 311 1 1201 166 134 42 chr18 628741 629054 -86048494 + MER4A LTR ERV1 1 342 -322 574 138 252 0 chr18 629107 629230 -86048318 + MER4C LTR ERV1 292 445 -20 197 349 121 35 chr18 629787 629985 -86047563 - L2 LINE L2 -1406 1908 1694 2750 93 3 8 chr18 630279 630644 -86046904 + THE1B LTR MaLR 2 364 0 841 88 9 0 chr18 630758 630871 -86046677 + MLT1B LTR MaLR 1 114 -276 2612 133 31 5 chr18 631698 632113 -86045435 + L1PA15 LINE L1 5719 6144 -21 197 32 0 32 chr18 632150 632181 -86045367 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 706 164 17 0 chr18 632195 632343 -86045205 + FLAM_A SINE Alu 6 155 0 672 138 0 0 chr18 632851 632981 -86044567 + (TCCA)n Simple_repeat Simple_repeat 2 131 0 1346 249 102 51 chr18 633533 633746 -86043802 - LTR33 LTR ERVL -1 520 319 1460 184 4 0 chr18 633746 634001 -86043547 + AluJb SINE Alu 6 261 -51 1346 249 102 51 chr18 634001 634277 -86043271 - LTR33 LTR ERVL -202 319 6 279 0 0 0 chr18 634368 634399 -86043149 + (TA)n Simple_repeat Simple_repeat 1 31 0 401 280 15 8 chr18 634678 634810 -86042738 - MLT1H LTR MaLR -394 155 23 942 272 87 19 chr18 635017 635340 -86042208 + MLT1J LTR MaLR 22 366 -145 2327 86 3 3 chr18 635780 636093 -86041455 + AluSp SINE Alu 1 313 0 218 211 39 19 chr18 636093 636145 -86041403 - MIR SINE MIR -188 74 22 189 355 0 0 chr18 636507 636569 -86040979 + MIR SINE MIR 90 151 -111 384 22 0 0 chr18 637505 637550 -86039998 + (CA)n Simple_repeat Simple_repeat 1 45 0 1471 150 138 0 chr18 637600 637876 -86039672 - AluSg SINE Alu 0 311 2 1775 152 7 3 chr18 637884 638173 -86039375 - AluJb SINE Alu -22 290 1 192 320 72 10 chr18 638302 638399 -86039149 - L2 LINE L2 -218 3054 2952 255 188 87 29 chr18 638673 638742 -86038806 + MIR SINE MIR 79 151 -111 2162 107 0 7 chr18 639211 639521 -86038027 + AluSx SINE Alu 1 308 -4 617 307 74 0 chr18 639652 639854 -86037694 + MIR SINE MIR 46 262 0 2180 35 69 14 chr18 640240 640530 -86037018 - AluY SINE Alu -5 306 1 2282 95 0 0 chr18 640739 641043 -86036505 - AluSx SINE Alu -8 304 1 24 0 0 29 chr18 641569 641586 -86035962 + AT_rich Low_complexity Low_complexity 1 17 -17 246 62 0 0 chr18 641586 641618 -86035930 + (TA)n Simple_repeat Simple_repeat 2 33 0 24 0 0 29 chr18 641618 641635 -86035913 + AT_rich Low_complexity Low_complexity 17 34 0 342 320 120 27 chr18 642591 642741 -86034807 + L2 LINE L2 3102 3265 -7 1016 168 0 20 chr18 642810 643012 -86034536 - L1MB7 LINE L1 0 6184 5987 220 273 0 18 chr18 643182 643237 -86034311 + L2 LINE L2 3257 3310 -3 2181 89 3 0 chr18 643303 643596 -86033952 - AluSp SINE Alu -19 294 1 368 255 326 27 chr18 643659 643843 -86033705 - MIR SINE MIR -10 252 14 258 32 0 0 chr18 644436 644467 -86033081 + (CA)n Simple_repeat Simple_repeat 2 32 0 2130 104 0 3 chr18 645187 645475 -86032073 + AluSx SINE Alu 1 287 -25 363 294 44 29 chr18 645607 645743 -86031805 - L2 LINE L2 0 3313 3176 2051 122 0 0 chr18 646791 647085 -86030463 + AluSx SINE Alu 1 294 -18 201 207 17 35 chr18 647094 647152 -86030396 - MIR3 SINE MIR 0 208 152 1677 168 10 13 chr18 647152 647462 -86030086 + AluJb SINE Alu 1 309 -3 1610 136 0 83 chr18 647876 648177 -86029371 - AluJo SINE Alu 0 312 37 2010 185 75 64 chr18 648205 648595 -86028953 - L1M4 LINE L1 -2989 3157 2756 2133 106 0 3 chr18 648595 648898 -86028650 - AluSx SINE Alu -10 302 1 2010 185 75 64 chr18 648898 649119 -86028429 - L1M4 LINE L1 -3390 2756 2539 21 0 0 0 chr18 649489 649510 -86028038 + AT_rich Low_complexity Low_complexity 1 21 0 764 203 31 0 chr18 650081 650244 -86027304 - L1 LINE L1 -2537 3609 3442 561 180 0 0 chr18 650244 650344 -86027204 - FLAM_A SINE Alu 0 142 43 640 127 8 25 chr18 650348 650466 -86027082 - L1 LINE L1 -2695 3451 3336 463 338 48 19 chr18 650834 651041 -86026507 - MIR SINE MIR -13 249 37 1609 182 3 10 chr18 652045 652353 -86025195 + AluJb SINE Alu 1 306 -6 32 0 0 0 chr18 652742 652774 -86024774 + AT_rich Low_complexity Low_complexity 1 32 0 2096 111 0 29 chr18 653122 653438 -86024110 - AluSx SINE Alu -5 307 1 506 258 98 0 chr18 654692 654824 -86022724 + MIR SINE MIR 106 250 -12 1581 150 7 44 chr18 656148 656442 -86021106 + AluJo SINE Alu 1 283 -29 2112 120 0 0 chr18 656600 656899 -86020649 + AluSx SINE Alu 6 304 -8 2091 151 20 25 chr18 657635 658027 -86019521 + MLT1B LTR MaLR 1 390 0 222 286 39 26 chr18 658267 658344 -86019204 - L2 LINE L2 -2 3311 3234 226 364 136 7 chr18 658794 658934 -86018614 - MIR SINE MIR -39 223 66 204 232 145 14 chr18 658936 659005 -86018543 - MIR SINE MIR -91 117 40 1422 161 10 52 chr18 659115 659420 -86018128 - AluJo SINE Alu -20 292 1 180 77 0 0 chr18 662315 662341 -86015207 + (A)n Simple_repeat Simple_repeat 1 26 0 702 286 61 13 chr18 663449 663680 -86013868 + MIR SINE MIR 10 251 -11 336 241 213 0 chr18 663937 664045 -86013503 - MIR SINE MIR -36 226 96 1634 114 4 4 chr18 664292 664528 -86013020 - AluSp SINE Alu -7 306 71 381 228 22 0 chr18 665229 665321 -86012227 + L2 LINE L2 2422 2515 -799 326 271 61 55 chr18 665433 665614 -86011934 - MER115 DNA AcHobo -479 214 33 422 265 204 16 chr18 665626 665871 -86011677 + L2 LINE L2 2516 2806 -508 665 305 10 15 chr18 665929 666132 -86011416 + MIR SINE MIR 17 218 -44 25 51 0 0 chr18 666284 666323 -86011225 + AT_rich Low_complexity Low_complexity 1 39 0 999 369 137 13 chr18 666373 667268 -86010280 - L3 LINE CR1 -39 1538 533 307 145 232 14 chr18 667268 667337 -86010211 + MLT1E LTR MaLR 1 84 -509 184 262 117 58 chr18 667377 667480 -86010068 + L2 LINE L2 3196 3304 -9 818 148 0 8 chr18 667620 667748 -86009800 - FLAM_C SINE Alu -11 132 6 2679 182 106 6 chr18 668010 668509 -86009039 + MLT1F1 LTR MaLR 19 567 0 1310 141 14 5 chr18 671103 671316 -86006232 + THE1A LTR MaLR 1 215 -140 7872 86 6 2 chr18 671316 672340 -86005208 + THE1A-int LTR MaLR 553 1580 0 2374 111 38 3 chr18 672340 672683 -86004865 + THE1A LTR MaLR 1 355 0 1568 124 0 0 chr18 672887 673104 -86004444 + AluSx SINE Alu 1 217 -95 822 88 0 9 chr18 673106 673220 -86004328 + AluSg/x SINE Alu 188 300 -12 368 307 138 34 chr18 673475 673796 -86003752 + L2 LINE L2 2910 3260 -12 2005 113 0 7 chr18 673806 673977 -86003571 - AluSq SINE Alu -9 304 134 883 45 0 0 chr18 673977 674088 -86003460 - L1PA4 LINE L1 0 6155 6045 2005 113 0 7 chr18 674088 674207 -86003341 - AluSq SINE Alu -179 134 16 21 0 0 0 chr18 674323 674344 -86003204 + AT_rich Low_complexity Low_complexity 1 21 0 497 292 208 5 chr18 675493 675695 -86001853 - MIR SINE MIR 0 262 20 284 262 143 0 chr18 675813 675897 -86001651 - L2 LINE L2 -10 3262 3167 513 99 0 0 chr18 677271 677352 -86000196 + (TCCA)n Simple_repeat Simple_repeat 1 81 0 318 323 86 68 chr18 677388 677713 -85999835 - L2 LINE L2 -54 3218 2888 603 145 26 77 chr18 680007 680087 -85997461 - MER7A DNA MER2_type -2692 337 263 2354 113 3 26 chr18 680087 680432 -85997116 + MER1B DNA MER1_type 1 337 0 603 145 26 77 chr18 680432 680468 -85997080 - MER7A DNA MER2_type -2766 263 227 3470 103 23 6 chr18 680492 680966 -85996582 - MER1A DNA MER1_type -47 482 1 1501 88 62 42 chr18 680966 681204 -85996344 - MER7A DNA MER2_type -105 241 1 570 264 13 13 chr18 681373 681528 -85996020 - MER63A DNA MER1_type 0 210 56 616 199 116 83 chr18 682311 682414 -85995134 - MER5A DNA MER1_type 0 189 76 2294 76 3 25 chr18 682414 682729 -85994819 - AluSq SINE Alu -5 308 1 616 199 116 83 chr18 682729 682806 -85994742 - MER5A DNA MER1_type -113 76 3 418 228 290 7 chr18 682815 682960 -85994588 - MER5A DNA MER1_type 0 189 4 21 0 0 0 chr18 686048 686069 -85991479 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr18 686435 686463 -85991085 + AT_rich Low_complexity Low_complexity 1 28 0 351 257 187 23 chr18 687017 687188 -85990360 - MIR SINE MIR -15 247 49 202 415 10 31 chr18 688061 688256 -85989292 - MIR3 SINE MIR -15 193 3 511 263 120 49 chr18 688318 688584 -85988964 - L2 LINE L2 -56 3257 2973 189 274 177 0 chr18 688600 688724 -85988824 + L2 LINE L2 2914 3059 -213 644 188 8 0 chr18 690046 690198 -85987350 + FLAM_C SINE Alu 1 153 0 1763 159 14 3 chr18 690531 690821 -85986727 + AluSx SINE Alu 3 295 -17 2231 49 0 7 chr18 690821 691146 -85986402 + AluY SINE Alu 1 323 0 960 202 25 15 chr18 691180 691383 -85986165 - MER63A DNA MER1_type -4 206 2 374 36 36 0 chr18 691624 691679 -85985869 + (TTTTTA)n Simple_repeat Simple_repeat 4 60 0 1248 14 0 20 chr18 691688 691836 -85985712 - L1HS LINE L1 -1 6154 6010 269 286 92 10 chr18 694240 694338 -85983210 - MER91A DNA MER1_type -88 108 3 2006 133 3 0 chr18 694653 694955 -85982593 - AluJo SINE Alu -9 303 1 833 261 92 12 chr18 697371 697712 -85979836 + L2 LINE L2 2715 3100 -213 953 189 0 0 chr18 697715 697895 -85979653 - FAM SINE Alu 0 49 1 570 263 48 43 chr18 697895 698104 -85979444 + L2 LINE L2 3104 3313 0 397 260 118 8 chr18 698202 698329 -85979219 - MIR SINE MIR -101 161 21 210 277 145 12 chr18 699007 699090 -85978458 + MIR SINE MIR 168 261 -1 1882 164 0 13 chr18 701353 701665 -85975883 - AluJo SINE Alu -4 308 1 376 303 139 20 chr18 702310 702662 -85974886 + L2 LINE L2 2707 3090 -182 219 88 0 0 chr18 702825 702859 -85974689 + (CA)n Simple_repeat Simple_repeat 2 35 0 938 95 0 0 chr18 703581 703718 -85973830 + L1MA5 LINE L1 6158 6294 -6 631 283 83 26 chr18 703770 704120 -85973428 + L1MC4a LINE L1 5526 5895 -1913 372 229 59 34 chr18 704697 704815 -85972733 + L3 LINE CR1 723 843 -734 358 308 46 15 chr18 704846 704976 -85972572 + MIR SINE MIR 105 238 -24 799 116 45 39 chr18 705046 705201 -85972347 - L1MA6 LINE L1 -6 6294 6139 31 0 0 0 chr18 705465 705496 -85972052 + AT_rich Low_complexity Low_complexity 1 31 0 2437 105 5 52 chr18 705978 706360 -85971188 - THE1B LTR MaLR 0 364 1 649 239 107 0 chr18 706360 706519 -85971029 + MER5B DNA MER1_type 3 178 0 609 294 184 45 chr18 706528 706991 -85970557 + L3 LINE CR1 1049 1575 -2 225 0 0 0 chr18 707555 707580 -85969968 + (T)n Simple_repeat Simple_repeat 1 25 0 2258 77 7 7 chr18 707959 708269 -85969279 + AluSx SINE Alu 2 311 -1 216 318 48 0 chr18 709667 709730 -85967818 + L2 LINE L2 2243 2308 -1006 246 201 236 62 chr18 709743 710002 -85967546 - L1M4 LINE L1 -2753 3393 3090 4577 140 57 12 chr18 710117 710866 -85966682 + LTR39 LTR ERV1 1 783 0 2965 84 31 67 chr18 711082 711605 -85965943 + Tigger3(Golem) DNA MER2_type 2241 2744 -285 1044 164 0 0 chr18 711713 711921 -85965627 + AluSg/x SINE Alu 121 328 0 2429 87 0 3 chr18 712037 712347 -85965201 + AluY SINE Alu 1 309 -2 1821 157 0 40 chr18 712475 712800 -85964748 + AluJb SINE Alu 1 312 0 2492 50 0 0 chr18 713525 713807 -85963741 + AluY SINE Alu 12 293 -18 1561 190 27 33 chr18 714739 715076 -85962472 - MER21B LTR ERV1 -11 852 518 240 35 0 0 chr18 715189 715218 -85962330 + (TA)n Simple_repeat Simple_repeat 2 30 0 203 221 115 67 chr18 715634 715738 -85961810 + MIR3 SINE MIR 91 199 -9 21 36 0 0 chr18 715833 715861 -85961687 + AT_rich Low_complexity Low_complexity 1 28 0 2237 86 10 0 chr18 715911 716202 -85961346 - AluSp SINE Alu -19 294 1 235 300 43 0 chr18 716547 716617 -85960931 + MIR3 SINE MIR 112 184 -24 203 247 151 0 chr18 716767 716840 -85960708 + L2 LINE L2 3230 3313 0 2247 90 3 3 chr18 716923 717236 -85960312 - AluSg SINE Alu 0 310 1 259 311 91 15 chr18 717340 717472 -85960076 + MIR SINE MIR 84 225 -37 1547 170 28 17 chr18 717588 717877 -85959671 - AluJo SINE Alu -20 292 1 2177 86 46 0 chr18 718757 719037 -85958511 - AluSg SINE Alu -17 293 1 1172 152 38 0 chr18 719089 719299 -85958249 - MER2 DNA MER2_type 0 345 128 892 179 7 0 chr18 719299 719450 -85958098 + AluJb SINE Alu 148 299 -13 372 189 9 123 chr18 719479 719585 -85957963 - MER2 DNA MER2_type -248 97 4 6655 65 12 40 chr18 719755 720670 -85956878 - SVA Other Other -339 1047 159 26 88 0 0 chr18 720935 721003 -85956545 + GC_rich Low_complexity Low_complexity 1 68 0 250 276 35 24 chr18 721044 721214 -85956334 + C-rich Low_complexity Low_complexity 6 177 0 213 132 0 0 chr18 722138 722176 -85955372 + (T)n Simple_repeat Simple_repeat 1 38 0 1998 65 0 8 chr18 722383 722629 -85954919 - AluSg SINE Alu -66 244 1 1949 129 54 0 chr18 722641 722936 -85954612 - AluSx SINE Alu -1 311 1 4704 161 49 27 chr18 722972 723797 -85953751 + L1MB3 LINE L1 5096 5954 -229 2223 101 3 3 chr18 723797 724095 -85953453 + AluSg SINE Alu 2 299 -11 4704 161 49 27 chr18 724095 724330 -85953218 + L1MB3 LINE L1 5954 6182 -1 1580 169 77 0 chr18 724479 724751 -85952797 + AluJo SINE Alu 1 293 -19 183 156 0 0 chr18 724963 724995 -85952553 + GA-rich Low_complexity Low_complexity 1 32 0 414 263 86 22 chr18 725204 725436 -85952112 + L2 LINE L2 2445 2691 -623 650 242 147 0 chr18 725436 725634 -85951914 + L1MEc LINE L1 149 375 -6021 180 213 128 106 chr18 726503 726597 -85950951 - L2 LINE L2 0 3272 3177 188 250 36 0 chr18 726905 726961 -85950587 + MER5A DNA MER1_type 129 186 -3 1550 147 12 23 chr18 727129 727387 -85950161 + AluJb SINE Alu 12 266 -46 515 124 22 0 chr18 727655 727744 -85949804 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 2394 88 0 7 chr18 729620 729927 -85947621 + AluSq SINE Alu 1 305 -8 247 302 54 16 chr18 730019 730148 -85947400 - MIR SINE MIR -10 252 119 1891 108 29 14 chr18 730582 730860 -85946688 + AluSg SINE Alu 1 282 -28 342 0 0 0 chr18 730860 730898 -85946650 + (CA)n Simple_repeat Simple_repeat 2 39 0 206 143 57 0 chr18 732315 732350 -85945198 - L2 LINE L2 -16 3256 3220 477 254 6 28 chr18 732350 732476 -85945072 - MIR SINE MIR -9 253 29 441 257 136 7 chr18 733750 733890 -85943658 + MIR SINE MIR 87 244 -18 338 321 95 36 chr18 734571 734739 -85942809 - L2 LINE L2 0 3272 3095 395 209 22 143 chr18 737021 737203 -85940345 - HAL1 LINE L1 -2 2505 2346 368 259 154 12 chr18 737208 737370 -85940178 - MLT1H LTR MaLR -2 593 409 458 226 87 31 chr18 737417 737612 -85939936 - MLT1H LTR MaLR -244 305 100 1104 264 81 40 chr18 737671 738118 -85939430 - HAL1 LINE L1 -161 2346 1882 192 184 0 0 chr18 738149 738198 -85939350 + (CA)n Simple_repeat Simple_repeat 2 50 0 3465 243 79 34 chr18 738198 738708 -85938840 - HAL1 LINE L1 -771 1736 1251 2345 98 0 46 chr18 738708 739034 -85938514 - AluSx SINE Alu -1 311 1 3465 243 79 34 chr18 739034 739178 -85938370 - HAL1 LINE L1 -1256 1251 1115 2257 122 0 0 chr18 739178 739481 -85938067 - AluSx SINE Alu -9 303 1 3465 243 79 34 chr18 739481 740099 -85937449 - HAL1 LINE L1 -1392 1115 405 3585 167 25 20 chr18 740133 740817 -85936731 - L1MB8 LINE L1 -27 6151 5465 486 247 181 0 chr18 740814 740980 -85936568 - HAL1 LINE L1 -2133 374 179 * 360 226 9 22 chr18 741007 741119 -85936429 + MIR SINE MIR 45 154 -67 2061 158 3 0 chr18 741125 741436 -85936112 + AluSx SINE Alu 1 312 0 1114 174 0 5 chr18 742667 742857 -85934691 + L1PA15 LINE L1 5977 6165 0 2223 109 3 0 chr18 743049 743342 -85934206 - AluSq SINE Alu -19 294 1 246 305 80 43 chr18 743735 743922 -85933626 - L2 LINE L2 -253 3060 2867 1541 222 83 35 chr18 744504 744986 -85932562 + MLT1D LTR MaLR 1 505 0 234 116 0 0 chr18 745171 745214 -85932334 + (TG)n Simple_repeat Simple_repeat 1 43 0 225 0 0 0 chr18 745213 745238 -85932310 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 2015 161 0 7 chr18 746120 746430 -85931118 - AluJo SINE Alu 0 312 5 333 252 114 32 chr18 746435 746558 -85930990 - MIR3 SINE MIR -43 165 33 2178 77 7 7 chr18 749668 749973 -85927575 - AluSq SINE Alu 0 305 1 197 291 165 0 chr18 750428 750555 -85926993 - MIR SINE MIR -27 235 88 2258 81 3 36 chr18 751102 751410 -85926138 + AluSx SINE Alu 1 298 -14 26 50 0 0 chr18 751740 751780 -85925768 + AT_rich Low_complexity Low_complexity 1 40 0 1534 192 26 29 chr18 752072 752384 -85925164 - AluJo SINE Alu -1 311 1 820 217 82 0 chr18 752512 752719 -85924829 + MIR SINE MIR 10 233 -29 402 315 27 7 chr18 752824 752970 -85924578 - MLT1L LTR MaLR -325 290 142 42 107 0 0 chr18 753029 753197 -85924351 + AT_rich Low_complexity Low_complexity 1 168 0 1571 171 7 78 chr18 754018 754248 -85923300 - AluJo SINE Alu -25 287 83 2277 104 0 10 chr18 754248 754557 -85922991 + AluSx SINE Alu 6 311 -1 1571 171 7 78 chr18 754557 754635 -85922913 - AluJo SINE Alu -229 83 1 435 307 54 6 chr18 755963 756129 -85921419 + MIR SINE MIR 86 259 -3 392 314 13 44 chr18 756267 756426 -85921122 + MIR3 SINE MIR 30 183 -25 2141 110 0 10 chr18 756498 756799 -85920749 - AluSg SINE Alu -12 298 1 24 0 0 0 chr18 756801 756825 -85920723 + AT_rich Low_complexity Low_complexity 1 24 0 345 109 0 0 chr18 757622 757677 -85919871 + (GGAA)n Simple_repeat Simple_repeat 2 56 0 265 318 0 0 chr18 758026 758092 -85919456 + L2 LINE L2 3141 3206 -66 1233 127 0 0 chr18 758517 758690 -85918858 - AluSg/x SINE Alu -6 306 134 1893 151 20 3 chr18 758691 758990 -85918558 - AluSx SINE Alu -8 304 1 2099 123 14 0 chr18 759379 759672 -85917876 + AluSx SINE Alu 1 297 -15 2998 166 68 28 chr18 762072 762686 -85914862 - L1MB7 LINE L1 0 6184 5546 1370 161 20 102 chr18 762951 763093 -85914455 + MER33 DNA MER1_type 1 153 -2432 1806 186 0 3 chr18 763093 763389 -85914159 + AluJo SINE Alu 1 295 -17 1370 161 20 102 chr18 763389 763599 -85913949 + MER33 DNA MER1_type 153 324 0 204 125 0 0 chr18 764708 764740 -85912808 + (T)n Simple_repeat Simple_repeat 1 32 0 1606 163 3 59 chr18 765629 765935 -85911613 + AluJo SINE Alu 2 290 -22 3460 67 10 40 chr18 768822 769290 -85908258 + L1PA8 LINE L1 5706 6161 -11 1766 74 0 22 chr18 769290 769519 -85908029 + AluY SINE Alu 88 311 0 3460 67 10 40 chr18 769519 769530 -85908018 + L1PA8 LINE L1 6161 6171 -1 1511 275 160 15 chr18 769870 770081 -85907467 - L2 LINE L2 0 3313 3134 2249 120 0 0 chr18 770081 770381 -85907167 - AluSq SINE Alu -13 300 1 1511 275 160 15 chr18 770381 771235 -85906313 - L2 LINE L2 -179 3134 2084 200 98 0 24 chr18 771293 771334 -85906214 + (TCTCTG)n Simple_repeat Simple_repeat 2 41 0 273 200 50 25 chr18 771388 771468 -85906080 + CT-rich Low_complexity Low_complexity 3 84 0 695 283 110 0 chr18 772330 772549 -85904999 - MIR SINE MIR -4 258 16 1576 165 68 47 chr18 772788 773018 -85904530 - MSTA-int LTR MaLR -960 691 450 2229 108 0 3 chr18 773018 773314 -85904234 - AluSg SINE Alu -15 295 1 1576 165 68 47 chr18 773314 773422 -85904126 - MSTA-int LTR MaLR -1201 450 346 390 156 0 0 chr18 773417 773481 -85904067 - MSTA-int LTR MaLR -1145 506 443 * 357 232 163 26 chr18 773481 773671 -85903877 - L2 LINE L2 -1001 2313 2098 2881 153 0 0 chr18 773687 774126 -85903422 - MSTA-int LTR MaLR -1212 439 1 2471 119 80 15 chr18 774126 774528 -85903020 - MSTA LTR MaLR 0 428 1 275 303 71 0 chr18 774530 774629 -85902919 - L2 LINE L2 -1222 2092 1987 783 285 13 27 chr18 774867 775165 -85902383 - LTR16B LTR ERVL -129 335 42 29 70 0 0 chr18 775650 775707 -85901841 + AT_rich Low_complexity Low_complexity 1 57 0 284 146 0 0 chr18 778134 778182 -85899366 - FRAM/FAM SINE Alu -92 83 36 995 126 0 0 chr18 778225 778360 -85899188 - FLAM_C SINE Alu -8 135 1 418 164 30 0 chr18 778396 778463 -85899085 + L1MB7 LINE L1 5574 5642 -536 252 170 0 38 chr18 778481 778534 -85899014 - L1MC4 LINE L1 -1340 6702 6652 * 2514 158 68 28 chr18 778519 778848 -85898700 + L1MB7 LINE L1 5633 5992 -192 2008 142 3 3 chr18 778848 779144 -85898404 + AluSx SINE Alu 1 296 -16 2514 158 68 28 chr18 779144 779345 -85898203 + L1MB7 LINE L1 5992 6184 0 350 239 15 30 chr18 780512 780646 -85896902 + Charlie7 DNA MER1_type 2480 2611 -1 2691 133 33 24 chr18 780646 781068 -85896480 - MSTB LTR MaLR 0 426 1 2506 68 0 0 chr18 781793 782100 -85895448 - AluY SINE Alu -4 307 1 459 0 0 0 chr18 782726 782777 -85894771 + (TG)n Simple_repeat Simple_repeat 2 52 0 1807 153 0 21 chr18 782780 783068 -85894480 - AluJb SINE Alu -30 282 1 224 259 49 49 chr18 783254 783335 -85894213 + L2 LINE L2 3145 3225 -47 2547 64 0 0 chr18 783502 783813 -85893735 - AluY SINE Alu 0 311 1 235 261 0 62 chr18 784056 784121 -85893427 + MER2 DNA MER2_type 282 342 -3 * 477 185 12 0 chr18 784121 784201 -85893347 - MER2 DNA MER2_type -264 81 1 4724 149 48 33 chr18 784238 784372 -85893176 - L1MA9 LINE L1 0 6312 6181 381 43 0 0 chr18 784372 784419 -85893129 + (TG)n Simple_repeat Simple_repeat 2 48 0 4724 149 48 33 chr18 784419 785160 -85892388 - L1MA9 LINE L1 -131 6181 5424 43 20 0 0 chr18 785205 785255 -85892293 + AT_rich Low_complexity Low_complexity 1 50 0 190 336 77 56 chr18 785426 785569 -85891979 - L2 LINE L2 0 3272 3127 1748 163 35 0 chr18 785960 786249 -85891299 - AluJb SINE Alu -13 299 1 1902 151 0 13 chr18 788250 788548 -85889000 - AluSq SINE Alu -19 294 1 2418 104 24 27 chr18 789193 789569 -85887979 + THE1C LTR MaLR 1 375 0 1890 145 31 0 chr18 790797 791086 -85886462 - AluJb SINE Alu -14 298 1 262 326 92 10 chr18 792289 792387 -85885161 - MIR3 SINE MIR -52 156 51 426 226 219 22 chr18 792798 792935 -85884613 + MIR SINE MIR 87 250 -12 198 224 0 0 chr18 792943 792992 -85884556 + (CTA)n Simple_repeat Simple_repeat 2 50 0 318 251 126 31 chr18 793047 793270 -85884278 + L2 LINE L2 2250 2493 -821 1728 166 29 32 chr18 793474 793782 -85883766 + AluJo SINE Alu 1 307 -5 1983 121 47 7 chr18 794413 794711 -85882837 - AluSx SINE Alu -2 310 1 599 206 28 21 chr18 794718 794859 -85882689 - L2 LINE L2 0 3313 3172 2201 127 3 0 chr18 795096 795404 -85882144 + AluSq SINE Alu 1 309 -4 457 267 8 38 chr18 796354 796485 -85881063 + L2 LINE L2 3171 3297 -16 2338 88 7 0 chr18 796500 796795 -85880753 - AluSq SINE Alu -16 297 1 199 258 144 52 chr18 797052 797149 -85880399 - L2 LINE L2 0 3313 3208 332 319 76 8 chr18 797506 797625 -85879923 - MIR SINE MIR -62 146 20 535 265 118 0 chr18 797893 798063 -85879485 + MIR SINE MIR 65 254 -8 1785 185 29 41 chr18 798067 798484 -85879064 - LTR37A LTR ERV1 0 426 15 541 283 62 6 chr18 798659 798836 -85878712 + MIR SINE MIR 35 221 -41 271 350 140 20 chr18 799350 799742 -85877806 + L3b LINE CR1 1103 1541 -42 229 252 153 0 chr18 799915 800026 -85877522 + L2 LINE L2 3176 3303 -10 221 73 0 24 chr18 801005 801046 -85876502 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 1758 191 7 0 chr18 801490 801789 -85875759 - AluJo SINE Alu -11 301 1 37 52 0 0 chr18 802100 802158 -85875390 + AT_rich Low_complexity Low_complexity 1 58 0 1312 230 42 42 chr18 803710 804067 -85873481 - MER74B LTR ERVL -200 422 66 1098 234 152 72 chr18 804541 805053 -85872495 - MLT1H1 LTR MaLR -2 553 1 1969 131 3 14 chr18 805273 805563 -85871985 + AluSx SINE Alu 1 287 -25 585 0 0 0 chr18 805564 805629 -85871919 + (AATAG)n Simple_repeat Simple_repeat 4 68 0 325 292 54 46 chr18 805701 805791 -85871757 - MIR SINE MIR -60 148 55 4599 76 7 0 chr18 805791 806341 -85871207 - MER41A LTR ERV1 0 554 1 325 292 54 46 chr18 806341 806380 -85871168 - MIR SINE MIR -153 55 18 408 337 55 6 chr18 806559 806740 -85870808 - MIR SINE MIR -65 197 8 249 273 91 0 chr18 807261 807327 -85870221 + L2 LINE L2 3204 3275 -38 1693 104 67 127 chr18 807349 807665 -85869883 + Tigger3(Golem) DNA MER2_type 2 2978 -51 2496 85 0 0 chr18 807781 808086 -85869462 - AluSg SINE Alu -5 305 1 570 251 134 0 chr18 808838 808999 -85868549 + MER5A DNA MER1_type 4 189 0 376 303 114 0 chr18 809005 809137 -85868411 - MIR3 SINE MIR -33 175 29 593 167 10 0 chr18 811051 811153 -85866395 - AluSg/x SINE Alu -6 306 204 255 31 0 0 chr18 811659 811691 -85865857 + (CA)n Simple_repeat Simple_repeat 2 33 0 2209 74 0 81 chr18 811719 812042 -85865506 - AluY SINE Alu -14 297 1 2080 130 7 0 chr18 812943 813243 -85864305 + AluSx SINE Alu 1 302 -10 219 348 170 7 chr18 814781 814916 -85862632 + MIR SINE MIR 33 144 -64 244 336 40 27 chr18 815977 816126 -85861422 + L2 LINE L2 2848 2998 -274 211 403 139 0 chr18 816212 816341 -85861207 + L2 LINE L2 3126 3272 0 285 297 135 27 chr18 817132 817280 -85860268 - MIR3 SINE MIR -44 164 1 230 0 33 0 chr18 817382 817412 -85860136 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 269 225 70 28 chr18 819075 819146 -85858402 - MER91A DNA MER1_type -3 193 120 713 236 66 54 chr18 819975 820233 -85857315 - Charlie7 DNA MER1_type -2036 576 316 321 260 115 19 chr18 821957 822061 -85855487 - L2 LINE L2 0 3313 3200 225 191 16 32 chr18 823822 823885 -85853663 + L1M3e LINE L1 1986 2047 -4983 1357 119 62 34 chr18 824510 824901 -85852647 - MER51A LTR ERV1 0 634 1 3733 104 98 30 chr18 826999 828055 -85849493 + MER11A LTR ERVK 1 1232 -4 2936 75 8 0 chr18 828306 828691 -85848857 + MER41A LTR ERV1 1 388 -166 2883 22 0 0 chr18 828691 829009 -85848539 + AluYb8 SINE Alu 1 318 0 1850 165 10 95 chr18 829712 830111 -85847437 + MLT1A1 LTR MaLR 1 365 0 218 344 44 0 chr18 830640 830730 -85846818 + MIR SINE MIR 134 227 -35 1293 171 0 32 chr18 830982 831228 -85846320 + AluJb SINE Alu 65 302 -10 1291 174 24 5 chr18 831382 831594 -85845954 + MER58A DNA MER1_type 3 218 -6 2354 108 3 0 chr18 831650 831957 -85845591 + AluSq SINE Alu 1 308 -5 189 260 250 10 chr18 832040 832140 -85845408 - MIR SINE MIR -105 157 34 651 191 7 52 chr18 832530 832666 -85844882 + FLAM_A SINE Alu 1 130 -12 1686 160 12 1 chr18 832789 833087 -85844461 + L1MC2 LINE L1 5672 5829 -322 393 212 0 0 chr18 833087 833153 -85844395 + AluJ/FLAM SINE Alu 1 66 -236 3446 197 39 20 chr18 833312 834077 -85843471 + L1MC3 LINE L1 5932 6137 -207 1549 160 23 0 chr18 834086 834348 -85843200 + L1MC3 LINE L1 6996 7263 -522 1476 105 5 0 chr18 834348 834548 -85843000 + AluSp SINE Alu 111 311 -2 978 161 11 6 chr18 834571 834751 -85842797 + L1MC3 LINE L1 7605 7785 0 601 226 80 147 chr18 834754 835068 -85842480 - LTR37B LTR ERV1 -166 302 10 2361 135 47 3 chr18 835365 835727 -85841821 - L1PB4 LINE L1 -2 6154 5777 764 316 24 4 chr18 837410 837660 -85839888 - ERVL LTR ERVL -958 4806 4552 303 288 0 14 chr18 837751 837824 -85839724 - ERVL LTR ERVL -1180 4305 4234 576 329 76 30 chr18 837830 838198 -85839350 - ERVL LTR ERVL -1660 4104 3720 270 0 0 0 chr18 838948 838978 -85838570 + (GA)n Simple_repeat Simple_repeat 1 30 0 884 132 6 78 chr18 839440 839607 -85837941 + L1PA16 LINE L1 6012 6166 0 653 240 31 70 chr18 840179 840584 -85836964 - MLT1J1 LTR MaLR -5 441 12 527 277 209 23 chr18 840711 840931 -85836617 - MIR SINE MIR 0 262 2 727 233 25 0 chr18 841392 841555 -85835993 - LTR33 LTR ERVL -354 167 1 1923 137 3 31 chr18 841655 841976 -85835572 - AluJb SINE Alu 0 312 1 476 274 0 0 chr18 842266 842383 -85835165 - L2 LINE L2 -7 3306 3190 3128 110 16 21 chr18 842435 842871 -85834677 - MER57B LTR ERV1 0 434 1 362 85 0 0 chr18 843048 843095 -85834453 - MADE1 DNA Mariner -33 47 1 312 305 128 37 chr18 843402 843547 -85834001 + MIR SINE MIR 53 220 -42 2191 100 10 3 chr18 843547 843836 -85833712 + AluSg SINE Alu 1 291 -19 312 305 128 37 chr18 843836 843877 -85833671 + MIR SINE MIR 220 256 -6 252 0 0 0 chr18 844137 844165 -85833383 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 5578 44 11 1 chr18 844165 844818 -85832730 - L1PA8 LINE L1 -16 6156 5498 2399 84 0 0 chr18 844828 845127 -85832421 - AluY SINE Alu -12 299 1 1925 134 14 17 chr18 845609 845899 -85831649 - AluSx SINE Alu -23 289 1 249 351 18 30 chr18 845899 846067 -85831481 - L2 LINE L2 -250 3022 2857 1568 156 102 0 chr18 846075 846350 -85831198 - MER7A DNA MER2_type -1 345 45 22 35 0 0 chr18 846592 846621 -85830927 + AT_rich Low_complexity Low_complexity 1 29 0 1729 157 25 14 chr18 846621 846902 -85830646 - AluJo SINE Alu -28 284 1 2336 89 0 0 chr18 847111 847403 -85830145 - AluSx SINE Alu -20 292 1 969 272 118 28 chr18 848292 849120 -85828428 - L1MC4a LINE L1 -374 5790 4919 2267 84 0 3 chr18 849120 849428 -85828120 - AluSq SINE Alu 0 307 1 969 272 118 28 chr18 849428 849666 -85827882 - L1MC4a LINE L1 -1245 4919 4704 769 212 55 63 chr18 849655 849910 -85827638 - L1MEc LINE L1 -985 5230 4978 * 10605 95 45 229 chr18 849911 850114 -85827434 - Tigger1 DNA MER2_type 0 2418 2179 2002 159 0 0 chr18 850114 850423 -85827125 + AluJb SINE Alu 2 310 -2 10605 95 45 229 chr18 850423 850479 -85827069 - Tigger1 DNA MER2_type -239 2179 2114 2114 127 0 0 chr18 850479 850771 -85826777 - AluSx SINE Alu -20 292 1 10605 95 45 229 chr18 850771 851348 -85826200 - Tigger1 DNA MER2_type -304 2114 1432 2472 68 7 7 chr18 851348 851655 -85825893 - AluSp SINE Alu -6 307 1 819 140 7 7 chr18 851659 851795 -85825753 - FLAM_C SINE Alu -5 138 3 10605 95 45 229 chr18 851795 852738 -85824810 - Tigger1 DNA MER2_type -989 1429 313 1298 184 0 17 chr18 852738 852971 -85824577 + AluJb SINE Alu 84 312 0 10605 95 45 229 chr18 852971 853119 -85824429 - Tigger1 DNA MER2_type -2105 313 139 870 170 7 7 chr18 853119 853266 -85824282 + FRAM SINE Alu 6 152 -24 10605 95 45 229 chr18 853266 853716 -85823832 - Tigger1 DNA MER2_type -2279 139 76 1606 161 26 36 chr18 853716 854021 -85823527 + AluJb SINE Alu 1 302 -10 10605 95 45 229 chr18 854021 854086 -85823462 - Tigger1 DNA MER2_type -2342 76 1 6440 235 57 57 chr18 854104 854763 -85822785 - L1MEc LINE L1 -1254 4961 4303 2123 106 14 3 chr18 854763 855047 -85822501 - AluSc SINE Alu -22 287 1 6440 235 57 57 chr18 855047 855538 -85822010 - L1MEc LINE L1 -1912 4303 3813 2141 132 0 10 chr18 855538 855841 -85821707 - AluSx SINE Alu -12 300 1 6440 235 57 57 chr18 855841 856263 -85821285 - L1MEc LINE L1 -2402 3813 3392 1716 144 43 22 chr18 856263 856540 -85821008 - AluJo SINE Alu -28 284 2 6440 235 57 57 chr18 856540 856946 -85820602 - L1MEc LINE L1 -2823 3392 2987 1812 188 0 0 chr18 856946 857254 -85820294 - AluJb SINE Alu -4 308 1 6440 235 57 57 chr18 857254 857963 -85819585 - L1MEc LINE L1 -3228 2987 2272 1210 179 155 0 chr18 857964 858216 -85819332 - AluJo SINE Alu -3 309 19 1364 199 0 0 chr18 858290 858561 -85818987 - L1MD3 LINE L1 -2 7993 7723 634 184 48 0 chr18 858584 858731 -85818817 - L1MEc LINE L1 -4127 2269 2116 529 172 166 37 chr18 859083 859246 -85818302 + MER69 DNA AcHobo 2093 2276 -250 830 171 16 0 chr18 859250 859379 -85818169 + AluJb SINE Alu 2 132 -180 584 205 226 16 chr18 859379 859569 -85817979 + MER69 DNA AcHobo 2270 2499 -27 219 36 0 0 chr18 859689 859717 -85817831 + (CA)n Simple_repeat Simple_repeat 1 28 0 30 0 0 0 chr18 860028 860058 -85817490 + AT_rich Low_complexity Low_complexity 1 30 0 270 355 41 33 chr18 861482 861675 -85815873 + MIR SINE MIR 19 210 -52 293 313 36 0 chr18 862069 862181 -85815367 + MIR3 SINE MIR 90 205 -3 2230 89 3 30 chr18 862189 862517 -85815031 - AluSq SINE Alu 0 313 1 2810 170 48 24 chr18 862605 863147 -85814401 - L1MD1 LINE L1 -5 6631 6077 740 169 65 0 chr18 863150 863274 -85814274 - FLAM_C SINE Alu -10 133 2 2263 190 5 0 chr18 863279 863684 -85813864 - L1MD1 LINE L1 -551 6085 5679 * 5190 181 63 20 chr18 863677 864976 -85812572 - L1MD1 LINE L1 -3818 2722 1375 1047 179 0 6 chr18 865034 865202 -85812346 - AluJb SINE Alu -145 167 1 2100 196 26 7 chr18 865234 865687 -85811861 - L1MD1 LINE L1 -5194 1346 885 1883 232 139 20 chr18 865719 866101 -85811447 - L1MD1 LINE L1 -5902 638 168 2133 87 56 3 chr18 866101 866388 -85811160 + AluSq SINE Alu 2 303 -10 1883 232 139 20 chr18 866388 866560 -85810988 - L1MD1 LINE L1 -6372 168 18 604 243 96 0 chr18 866695 866872 -85810676 - MIR SINE MIR -21 241 48 2008 106 57 0 chr18 867283 867566 -85809982 - AluSq SINE Alu -14 299 1 2094 129 7 16 chr18 867689 867999 -85809549 + AluSx SINE Alu 1 307 -5 209 283 0 0 chr18 868169 868222 -85809326 + T-rich Low_complexity Low_complexity 5 57 0 627 230 43 19 chr18 868840 869001 -85808547 - MER5B DNA MER1_type -4 174 10 1647 231 74 50 chr18 869051 869553 -85807995 + MLT2B1 LTR ERVL 7 520 0 1298 139 0 0 chr18 870109 870303 -85807245 - MER41B LTR ERV1 0 635 442 295 211 0 53 chr18 870773 870849 -85806699 - AluJ/FLAM SINE Alu -230 72 1 2436 84 0 3 chr18 870977 871286 -85806262 - AluY SINE Alu -3 308 1 324 64 0 0 chr18 871402 871449 -85806099 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2172 122 0 0 chr18 871452 871740 -85805808 - AluSx SINE Alu -24 288 1 212 279 15 15 chr18 871744 871812 -85805736 + MIR3 SINE MIR 114 181 -27 301 286 120 0 chr18 872427 872560 -85804988 - L2 LINE L2 -1 3312 3164 2063 116 3 3 chr18 872569 872862 -85804686 + AluSx SINE Alu 1 293 -19 855 287 72 47 chr18 872893 873339 -85804209 - MLT1K LTR MaLR -6 582 126 522 251 148 20 chr18 873497 873700 -85803848 + MIR SINE MIR 1 229 -33 188 325 25 12 chr18 873719 873799 -85803749 - L2 LINE L2 -219 3053 2973 1597 146 41 82 chr18 874241 874358 -85803190 + AluJo SINE Alu 1 121 -196 191 36 36 0 chr18 874358 874386 -85803162 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1597 146 41 82 chr18 874386 874597 -85802951 + AluJo SINE Alu 121 317 0 612 224 12 43 chr18 875024 875185 -85802363 - MIR SINE MIR -91 171 16 2598 53 0 3 chr18 875496 875800 -85801748 - AluY SINE Alu -8 303 1 2236 130 122 8 chr18 875888 876272 -85801276 - MSTA LTR MaLR 0 428 1 562 107 0 24 chr18 876333 876417 -85801131 + AluJ/FRAM SINE Alu 217 298 -14 209 189 0 0 chr18 876504 876541 -85801007 + (TG)n Simple_repeat Simple_repeat 2 38 0 198 0 0 0 chr18 876541 876563 -85800985 + (GA)n Simple_repeat Simple_repeat 1 22 0 619 283 93 17 chr18 877168 877405 -85800143 + MIR SINE MIR 7 261 -1 2183 198 40 92 chr18 877669 878008 -85799540 + LTR9 LTR ERV1 1 294 -318 2231 79 7 0 chr18 878008 878325 -85799223 + AluSp SINE Alu 3 321 0 2183 198 40 92 chr18 878325 878629 -85798919 + LTR9 LTR ERV1 294 612 0 2195 112 0 7 chr18 878752 879057 -85798491 + AluY SINE Alu 1 303 -8 475 273 35 14 chr18 879107 879250 -85798298 - MIR SINE MIR 0 262 117 2179 126 0 0 chr18 879323 879617 -85797931 - AluSx SINE Alu -18 294 1 2320 164 26 7 chr18 879893 880308 -85797240 + L1MB3 LINE L1 5716 6138 -45 1126 169 0 0 chr18 880308 880480 -85797068 + FRAM SINE Alu 1 171 -5 431 141 0 0 chr18 880480 880551 -85796997 + AluSc SINE Alu 234 304 -5 2009 143 3 10 chr18 880927 881234 -85796314 + AluJo SINE Alu 1 305 -7 208 264 28 42 chr18 881834 881906 -85795642 + C-rich Low_complexity Low_complexity 3 73 0 216 325 26 18 chr18 882291 882405 -85795143 - MIR SINE MIR -107 155 41 1039 169 6 0 chr18 883368 883528 -85794020 + AluJb SINE Alu 136 296 -16 2452 104 0 0 chr18 884166 884474 -85793074 - AluSq SINE Alu -5 308 1 1316 139 0 54 chr18 884476 884699 -85792849 - AluJb SINE Alu -16 296 86 2267 104 0 10 chr18 884861 885159 -85792389 + AluSg SINE Alu 1 295 -15 43931 30 22 1 chr18 885161 891186 -85786362 + L1HS LINE L1 2 6155 0 247 200 92 0 chr18 891515 891580 -85785968 - MER45A DNA AcHobo -7 171 101 2195 122 3 0 chr18 891580 891891 -85785657 + AluSx SINE Alu 1 312 0 229 82 41 0 chr18 891910 891959 -85785589 + A-rich Low_complexity Low_complexity 4 54 0 292 400 0 0 chr18 892768 892918 -85784630 + MIR3 SINE MIR 30 179 -29 303 319 43 9 chr18 893698 893814 -85783734 + MIR SINE MIR 28 147 -115 1967 176 0 0 chr18 893844 894146 -85783402 - AluJb SINE Alu -10 302 1 2811 121 16 16 chr18 894263 894693 -85782855 - Tigger2a DNA MER2_type 0 434 5 228 246 35 0 chr18 895022 895079 -85782469 + L2 LINE L2 3121 3179 -93 2682 94 0 0 chr18 895748 896100 -85781448 - THE1A LTR MaLR -3 352 1 11624 97 7 9 chr18 896100 897315 -85780233 - THE1A-int LTR MaLR 0 1580 368 2083 100 7 23 chr18 897315 897615 -85779933 + AluSg SINE Alu 1 295 -15 11624 97 7 9 chr18 897615 897983 -85779565 - THE1A-int LTR MaLR -1212 368 1 2868 70 0 0 chr18 897983 898338 -85779210 - THE1A LTR MaLR 0 355 1 1657 135 10 61 chr18 898904 899069 -85778479 - AluJo SINE Alu -11 301 156 2388 92 0 0 chr18 899069 899363 -85778185 - AluSx SINE Alu -18 294 1 1657 135 10 61 chr18 899363 899493 -85778055 - AluJo SINE Alu -156 156 21 201 74 0 0 chr18 900224 900251 -85777297 + (A)n Simple_repeat Simple_repeat 1 27 0 717 168 8 0 chr18 900703 900822 -85776726 - FLAM_C SINE Alu -22 121 2 1327 191 23 0 chr18 901249 901505 -85776043 + L1MB3 LINE L1 5920 6181 -2 1667 243 56 10 chr18 901518 902021 -85775527 + Charlie7 DNA MER1_type 1714 2239 -373 2160 181 168 196 chr18 902053 902316 -85775232 + L1MD3 LINE L1 6620 6889 -1101 1084 126 5 40 chr18 902316 902515 -85775033 + L1PB1 LINE L1 5959 6150 -1 2160 181 168 196 chr18 902515 902772 -85774776 + L1MD3 LINE L1 6889 7152 -838 305 198 28 113 chr18 902772 902878 -85774670 + MLT1F1 LTR MaLR 35 131 -436 2160 181 168 196 chr18 902878 903434 -85774114 + L1MD3 LINE L1 7152 7943 -47 1536 186 3 55 chr18 903434 903746 -85773802 - AluJb SINE Alu -16 296 1 2160 181 168 196 chr18 903746 903793 -85773755 + L1MD3 LINE L1 7943 7990 0 2009 124 13 20 chr18 903796 904102 -85773446 + AluSx SINE Alu 1 304 -8 485 256 97 31 chr18 904102 904453 -85773095 + Charlie7 DNA MER1_type 2239 2612 0 436 267 0 48 chr18 904514 904660 -85772888 + MIR SINE MIR 85 223 -39 29 0 0 0 chr18 905504 905533 -85772015 + AT_rich Low_complexity Low_complexity 1 29 0 243 0 0 0 chr18 905674 905701 -85771847 + (TG)n Simple_repeat Simple_repeat 1 27 0 1236 101 28 0 chr18 906275 906453 -85771095 + L1MA1 LINE L1 6116 6298 -4 29 0 0 0 chr18 906453 906482 -85771066 + AT_rich Low_complexity Low_complexity 1 29 0 2207 106 7 3 chr18 906669 906972 -85770576 + AluSq SINE Alu 2 305 -8 220 305 24 0 chr18 907286 907368 -85770180 - L2 LINE L2 -1 3271 3188 216 87 0 87 chr18 907428 907474 -85770074 - L2 LINE L2 -1 3312 3271 2538 36 30 0 chr18 908118 908420 -85769128 - AluY SINE Alu 0 311 1 252 86 0 0 chr18 908514 908549 -85768999 + (TA)n Simple_repeat Simple_repeat 2 36 0 304 200 0 67 chr18 908570 908660 -85768888 - L1MC4 LINE L1 -1345 6697 6614 288 0 0 0 chr18 908661 908762 -85768786 + (CA)n Simple_repeat Simple_repeat 1 133 0 288 0 0 0 chr18 908762 908794 -85768754 + (CA)n Simple_repeat Simple_repeat 2 33 0 250 170 0 0 chr18 908874 908921 -85768627 - LTR66 LTR ERVL -172 438 392 * 691 184 48 30 chr18 908917 909085 -85768463 + Charlie7 DNA MER1_type 2136 2306 -306 2531 45 3 0 chr18 909105 909413 -85768135 - AluY SINE Alu -2 309 1 1128 37 0 0 chr18 909592 909727 -85767821 + AluY SINE Alu 174 308 -3 582 264 58 96 chr18 909783 910356 -85767192 + L1ME3A LINE L1 3117 3667 -2479 738 273 55 58 chr18 910396 910710 -85766838 + L1ME3A LINE L1 4176 4488 -1658 2258 110 3 0 chr18 910710 911002 -85766546 - AluSq SINE Alu -20 293 1 738 273 55 58 chr18 911002 911307 -85766241 + L1ME3A LINE L1 4488 4793 -1353 378 242 118 70 chr18 911316 911576 -85765972 + L1ME3A LINE L1 4876 5149 -997 2823 112 147 13 chr18 911584 912048 -85765500 + MER1A DNA MER1_type 1 526 -1 1439 152 95 24 chr18 912082 912378 -85765170 - MER44D DNA MER2_type 0 609 23 646 286 110 62 chr18 912452 912952 -85764596 - MLT1H1 LTR MaLR 0 555 32 539 258 146 26 chr18 913009 913635 -85763913 + L1ME3A LINE L1 5235 5962 -208 1802 141 4 19 chr18 913944 914214 -85763334 - AluSx SINE Alu -46 266 1 360 219 167 0 chr18 914362 914476 -85763072 + L1MC5 LINE L1 7721 7853 -108 270 0 0 0 chr18 914841 914871 -85762677 + (CTG)n Simple_repeat Simple_repeat 1 30 0 386 283 39 54 chr18 915201 915406 -85762142 + L2 LINE L2 2866 3067 -205 2165 114 0 3 chr18 916071 916361 -85761187 + AluSx SINE Alu 5 293 -19 369 27 206 110 chr18 917415 917488 -85760060 - MADE1 DNA Mariner 0 80 1 327 309 70 15 chr18 917505 917706 -85759842 - MIR SINE MIR -45 217 6 259 280 75 0 chr18 917758 917851 -85759697 + MLT1J LTR MaLR 43 142 -369 367 348 43 16 chr18 917913 918100 -85759448 - LTR16C LTR ERVL 0 491 300 2344 109 0 3 chr18 918790 919101 -85758447 + AluSq SINE Alu 1 310 -3 367 257 21 69 chr18 919382 919526 -85758022 - MIR SINE MIR -119 143 7 1915 146 10 3 chr18 919657 919952 -85757596 + AluJo SINE Alu 1 297 -15 250 235 49 29 chr18 920000 920102 -85757446 + MIR SINE MIR 109 212 -50 358 283 144 12 chr18 920127 920300 -85757248 - MIR SINE MIR -25 237 42 1664 168 0 56 chr18 920806 920952 -85756596 + AluJb SINE Alu 1 123 -189 2215 128 0 0 chr18 920952 921257 -85756291 + AluSq SINE Alu 1 305 -8 1664 168 0 56 chr18 921257 921414 -85756134 + AluJb SINE Alu 123 287 -25 23 0 0 0 chr18 921415 921438 -85756110 + AT_rich Low_complexity Low_complexity 1 23 0 185 62 0 31 chr18 923010 923042 -85754506 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 954 167 67 17 chr18 925246 925423 -85752125 - MER50 LTR ERV1 0 734 549 785 235 21 89 chr18 925423 925704 -85751844 + LTR9 LTR ERV1 1 262 -350 2360 88 0 0 chr18 925705 926000 -85751548 + AluSg SINE Alu 1 295 -15 294 50 0 0 chr18 926011 926051 -85751497 + (GGAA)n Simple_repeat Simple_repeat 4 43 0 1187 233 68 21 chr18 926051 926412 -85751136 + LTR19C LTR ERV1 220 779 0 2277 216 44 9 chr18 926413 926941 -85750607 - MER50 LTR ERV1 -188 546 1 291 311 10 29 chr18 927038 927141 -85750407 + MIR SINE MIR 46 146 -116 227 258 30 0 chr18 927662 927728 -85749820 - MIR SINE MIR -102 106 39 210 179 0 71 chr18 928087 928143 -85749405 - L2 LINE L2 0 3313 3262 1973 155 0 0 chr18 928143 928453 -85749095 - AluSx SINE Alu -2 310 1 1398 158 11 42 chr18 929318 929578 -85747970 + AluJb SINE Alu 1 252 -60 230 81 27 0 chr18 929585 929622 -85747926 + (GA)n Simple_repeat Simple_repeat 2 39 0 28 0 0 0 chr18 929894 929922 -85747626 + GC_rich Low_complexity Low_complexity 1 28 0 2215 117 0 0 chr18 932731 933029 -85744519 + AluSx SINE Alu 1 298 -14 1268 277 26 22 chr18 933350 933765 -85743783 - LTR16A LTR ERVL 0 450 34 2208 102 27 0 chr18 933862 934157 -85743391 - AluY SINE Alu -8 303 1 1745 172 0 30 chr18 934490 934792 -85742756 - AluJb SINE Alu -19 293 1 542 307 107 18 chr18 934901 935237 -85742311 - MERVL LTR ERVL -599 4886 4663 319 341 58 18 chr18 935304 935530 -85742018 - MERVL LTR ERVL -740 4549 4022 2214 105 0 0 chr18 935749 936034 -85741514 - AluSx SINE Alu -19 293 9 1818 128 67 78 chr18 936034 936174 -85741374 - L1MCa LINE L1 -4434 2130 1990 968 83 4 200 chr18 936174 936414 -85741134 - 7SK RNA RNA 0 193 1 1818 128 67 78 chr18 936414 936517 -85741031 - L1MCa LINE L1 -4574 1990 1887 1548 128 0 0 chr18 936517 936736 -85740812 - AluSg/x SINE Alu -12 298 80 1818 128 67 78 chr18 936736 937109 -85740439 - L1MCa LINE L1 -4677 1887 1413 6289 115 17 11 chr18 937122 938099 -85739449 - L1MA4A LINE L1 -5 6298 5316 759 195 83 22 chr18 938092 938369 -85739179 - L1MCa LINE L1 -5132 1432 1139 * 493 241 0 0 chr18 938385 938676 -85738872 - FLAM_A SINE Alu 0 142 27 3327 186 82 42 chr18 938725 939581 -85737967 - L1MCa LINE L1 -4850 1195 306 565 187 24 31 chr18 939599 939728 -85737820 - L1MCa LINE L1 -5921 281 3 2849 214 31 15 chr18 939737 940456 -85737092 - L1MDa LINE L1 -1767 4773 4044 1375 82 6 0 chr18 940456 940626 -85736922 - AluSg/x SINE Alu -11 301 131 315 190 0 0 chr18 940626 940684 -85736864 - L1MDa LINE L1 -2484 4056 3999 1178 151 134 22 chr18 940684 940916 -85736632 - AluJo SINE Alu -14 298 41 3293 214 60 59 chr18 940917 941008 -85736540 - L1MDa LINE L1 -2535 4005 3916 2308 94 0 16 chr18 941008 941316 -85736232 - AluSq SINE Alu -10 303 1 3293 214 60 59 chr18 941316 941564 -85735984 - L1MDa LINE L1 -2624 3916 3670 288 0 0 0 chr18 941564 941596 -85735952 + (TC)n Simple_repeat Simple_repeat 2 33 0 3293 214 60 59 chr18 941596 942674 -85734874 - L1MDa LINE L1 -2870 3670 2566 2020 106 44 0 chr18 942674 942949 -85734599 - AluSx SINE Alu -23 289 3 3293 214 60 59 chr18 942949 943665 -85733883 - L1MDa LINE L1 -3974 2566 1852 185 65 32 0 chr18 943688 943719 -85733829 + (TAAAAA)n Simple_repeat Simple_repeat 3 34 0 532 338 141 3 chr18 943784 944166 -85733382 + L3 LINE CR1 1063 1497 -80 572 274 27 0 chr18 944502 944648 -85732900 - MIR SINE MIR -107 155 6 702 315 102 29 chr18 944734 945147 -85732401 - MARNA DNA Mariner -76 510 68 342 258 86 26 chr18 945383 945534 -85732014 + MIR SINE MIR 37 196 -66 483 250 41 59 chr18 946138 946358 -85731190 + Charlie8 DNA MER1_type 75 290 -2127 201 222 12 84 chr18 946379 946546 -85731002 + (CCCG)n Simple_repeat Simple_repeat 2 156 0 1997 113 63 0 chr18 946998 947282 -85730266 + AluSx SINE Alu 1 302 -10 433 264 66 47 chr18 948813 949025 -85728523 + MIR SINE MIR 47 262 0 25 0 0 28 chr18 949186 949205 -85728343 + AT_rich Low_complexity Low_complexity 1 20 -15 2371 73 0 51 chr18 949205 949519 -85728029 + AluY SINE Alu 1 298 -13 25 0 0 28 chr18 949519 949535 -85728013 + AT_rich Low_complexity Low_complexity 20 35 0 22 0 0 0 chr18 949683 949705 -85727843 + AT_rich Low_complexity Low_complexity 1 22 0 601 179 18 0 chr18 950455 950567 -85726981 + MER81 DNA DNA 1 114 0 2183 113 3 13 chr18 950916 951216 -85726332 + AluSx SINE Alu 1 297 -15 1260 128 0 0 chr18 951216 951395 -85726153 + AluSg/x SINE Alu 132 310 0 874 150 0 0 chr18 951495 951628 -85725920 + FLAM_C SINE Alu 1 133 0 261 343 65 0 chr18 951723 951831 -85725717 - L2 LINE L2 -9 3263 3149 378 204 99 56 chr18 951845 951987 -85725561 + LTR33 LTR ERVL 1 148 -373 296 242 63 0 chr18 952083 952178 -85725370 + LTR33 LTR ERVL 415 515 -6 514 222 23 29 chr18 952437 952608 -85724940 - L2 LINE L2 -435 2879 2710 455 248 183 0 chr18 952695 952848 -85724700 + MER5A DNA MER1_type 9 189 0 2436 190 71 58 chr18 953015 953456 -85724092 - L1MD2 LINE L1 -5 6354 5899 1854 139 4 4 chr18 953456 953729 -85723819 - AluJb SINE Alu -31 281 9 2436 190 71 58 chr18 953729 953961 -85723587 - L1MD2 LINE L1 -460 5899 5672 1752 153 101 12 chr18 954213 954629 -85722919 - MER61D LTR ERV1 0 501 1 295 163 0 2 chr18 954902 955145 -85722403 + AluJb SINE Alu 1 302 0 1805 158 40 0 chr18 955223 955521 -85722027 - AluJb SINE Alu -2 310 1 1183 164 9 88 chr18 956503 956682 -85720866 - AluJo SINE Alu 0 312 120 180 0 0 0 chr18 956682 956702 -85720846 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2043 124 0 3 chr18 956702 956985 -85720563 - AluSx SINE Alu -30 282 1 1183 164 9 88 chr18 956985 957000 -85720548 - AluJo SINE Alu -191 121 106 1547 176 35 14 chr18 957000 957284 -85720264 - AluJb SINE Alu -22 290 1 1183 164 9 88 chr18 957284 957404 -85720144 - AluJo SINE Alu -206 106 21 198 0 0 0 chr18 958057 958079 -85719469 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 963 194 0 0 chr18 958129 958294 -85719254 + FRAM SINE Alu 2 166 0 2446 131 37 0 chr18 958534 958917 -85718631 - Tigger4(Zombi) DNA MER2_type -1 2730 2334 1172 153 34 51 chr18 958920 959098 -85718450 - Tigger4(Zombi) DNA MER2_type -2500 231 56 2193 130 0 0 chr18 959098 959398 -85718150 + AluSx SINE Alu 1 300 -12 1172 153 34 51 chr18 959398 959454 -85718094 - Tigger4(Zombi) DNA MER2_type -2675 56 1 872 128 23 0 chr18 960309 960442 -85717106 + AluJb SINE Alu 1 136 -176 991 167 0 0 chr18 960973 961129 -85716419 + FAM SINE Alu 3 158 -17 31 0 0 0 chr18 961135 961166 -85716382 + AT_rich Low_complexity Low_complexity 1 31 0 188 346 98 19 chr18 961208 961413 -85716135 - L2 LINE L2 -1257 2057 1837 463 281 181 34 chr18 961468 961910 -85715638 + L2 LINE L2 2383 2889 -425 725 198 102 0 chr18 961981 962138 -85715410 + MER45A DNA AcHobo 5 177 -1 286 304 31 19 chr18 962154 962315 -85715233 + L2 LINE L2 3021 3183 -130 2188 117 3 3 chr18 962691 962989 -85714559 - AluSx SINE Alu -13 299 2 2195 122 3 0 chr18 963011 963307 -85714241 - AluSx SINE Alu -15 297 1 635 79 18 26 chr18 963840 963954 -85713594 + (GGAA)n Simple_repeat Simple_repeat 3 115 0 28 29 0 0 chr18 965997 966032 -85711516 + AT_rich Low_complexity Low_complexity 1 35 0 2494 72 3 3 chr18 966871 967177 -85710371 + AluSp SINE Alu 2 307 -6 303 169 0 153 chr18 969245 969266 -85708282 - Charlie7 DNA MER1_type 0 2612 2589 2023 126 33 0 chr18 969266 969567 -85707981 - AluSx SINE Alu -1 311 1 303 169 0 153 chr18 969567 969663 -85707885 - Charlie7 DNA MER1_type -23 2589 2513 1598 239 60 22 chr18 969666 970130 -85707418 - Charlie7 DNA MER1_type -1923 689 208 25 31 0 0 chr18 970525 970557 -85706991 + AT_rich Low_complexity Low_complexity 1 32 0 1035 111 41 12 chr18 970565 970737 -85706811 - L1MB2 LINE L1 -5 6166 5990 833 131 8 16 chr18 971890 972012 -85705536 - FLAM_A SINE Alu -12 121 1 476 273 36 36 chr18 972321 972494 -85705054 - MIR SINE MIR -34 228 57 2217 130 0 0 chr18 972592 972892 -85704656 - AluSq SINE Alu -13 300 1 2235 115 0 0 chr18 972922 973226 -85704322 + AluSx SINE Alu 1 304 -8 209 164 18 18 chr18 973808 973863 -85703685 + (TTATA)n Simple_repeat Simple_repeat 1 55 0 326 325 0 0 chr18 974121 974201 -85703347 + L2 LINE L2 3234 3313 0 270 355 58 36 chr18 974810 974948 -85702600 + L2 LINE L2 3099 3239 -33 324 0 0 0 chr18 975075 975111 -85702437 + (CA)n Simple_repeat Simple_repeat 2 37 0 201 309 179 0 chr18 975501 975585 -85701963 + MIR SINE MIR 25 123 -85 1791 115 46 0 chr18 975658 975918 -85701630 - AluSq SINE Alu -7 306 35 2029 131 3 16 chr18 976127 976604 -85700944 + AluSx SINE Alu 1 312 0 2135 125 0 10 chr18 977378 977691 -85699857 - AluSx SINE Alu -2 310 1 2259 101 20 3 chr18 978191 978497 -85699051 - AluSq SINE Alu -2 311 1 1650 206 43 107 chr18 979542 979667 -85697881 + MLT1D LTR MaLR 1 132 -258 2318 111 0 0 chr18 979667 979973 -85697575 - AluSx SINE Alu -6 306 1 1650 206 43 107 chr18 979973 980240 -85697308 + MLT1D LTR MaLR 132 238 -152 1530 78 0 0 chr18 980240 980431 -85697117 - AluSc SINE Alu 0 309 119 1650 206 43 107 chr18 980431 980573 -85696975 + MLT1D LTR MaLR 238 388 -2 318 321 57 19 chr18 981182 981288 -85696260 - L2 LINE L2 -36 3236 3127 285 183 0 17 chr18 981356 981416 -85696132 - L2 LINE L2 -86 3227 3169 231 114 0 0 chr18 981885 981920 -85695628 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 57 0 0 chr18 982035 982070 -85695478 + AT_rich Low_complexity Low_complexity 1 35 0 2133 108 3 7 chr18 982437 982733 -85694815 + AluSx SINE Alu 1 295 -17 1736 174 111 32 chr18 983062 983526 -85694022 - LTR10A LTR ERV1 -61 548 1 2183 75 18 14 chr18 983688 983968 -85693580 - AluSg SINE Alu -29 281 1 253 314 78 0 chr18 984583 984685 -85692863 + MIR3 SINE MIR 64 173 -35 1881 157 63 6 chr18 984706 985025 -85692523 - MER1B DNA MER1_type 0 337 1 2135 87 0 0 chr18 985306 985571 -85691977 - AluSg SINE Alu -45 265 1 291 250 106 19 chr18 985634 985738 -85691810 + L1ME4a LINE L1 5982 6094 -27 341 206 59 0 chr18 985739 985807 -85691741 - Tigger5 DNA MER2_type -1 2322 2251 333 200 0 0 chr18 985776 985831 -85691717 - Tigger5 DNA MER2_type -2268 55 1 * 2368 83 0 10 chr18 986237 986539 -85691009 + AluSg SINE Alu 1 299 -11 2090 127 3 7 chr18 986749 987048 -85690500 + AluSq SINE Alu 1 298 -15 2370 76 3 0 chr18 987133 987434 -85690114 - AluY SINE Alu -9 302 1 330 335 87 50 chr18 987498 987548 -85690000 + L2 LINE L2 2551 2598 -674 1860 157 3 32 chr18 987548 987861 -85689687 - AluJb SINE Alu -8 304 1 330 335 87 50 chr18 987861 988294 -85689254 + L2 LINE L2 2598 3051 -221 830 145 0 22 chr18 988509 988647 -85688901 - L1PB3 LINE L1 -3 6151 6017 736 201 7 7 chr18 988765 988909 -85688639 - L1PA16 LINE L1 -1 6165 6022 2377 93 3 0 chr18 988934 989235 -85688313 - AluSp SINE Alu -11 302 1 1027 106 0 0 chr18 989237 989369 -85688179 - AluSp SINE Alu -181 132 1 1354 124 68 174 chr18 990619 990767 -85686781 + MER2 DNA MER2_type 2 164 -181 183 42 0 0 chr18 990767 990791 -85686757 + (TTG)n Simple_repeat Simple_repeat 2 25 0 2117 133 0 0 chr18 990793 991086 -85686462 - AluSx SINE Alu -19 293 1 1354 124 68 174 chr18 991086 991116 -85686432 + MER2 DNA MER2_type 165 197 -148 3818 47 9 2 chr18 991116 991561 -85685987 + L1PA5 LINE L1 5707 6154 0 1354 124 68 174 chr18 991561 991758 -85685790 + MER2 DNA MER2_type 197 341 -4 2321 106 0 0 chr18 991787 992089 -85685459 - AluSq SINE Alu -11 302 1 1376 166 53 50 chr18 992916 993254 -85684294 + MER33 DNA MER1_type 1 324 0 225 247 153 12 chr18 993271 993356 -85684192 - MIR SINE MIR -9 253 157 240 167 0 0 chr18 993356 993404 -85684144 + T-rich Low_complexity Low_complexity 1 48 0 2137 131 0 3 chr18 993430 993735 -85683813 - AluSx SINE Alu -8 304 1 2713 33 0 0 chr18 993745 994051 -85683497 - AluY SINE Alu -4 307 2 431 286 8 24 chr18 994062 994188 -85683360 - MIR SINE MIR -133 129 6 204 284 37 12 chr18 995169 995250 -85682298 - MIR SINE MIR -123 139 57 325 250 119 54 chr18 995460 995628 -85681920 - MLT1L LTR MaLR -102 513 335 2108 127 0 10 chr18 995722 996022 -85681526 + AluSx SINE Alu 1 297 -15 951 310 154 37 chr18 996338 996543 -85681005 - L2 LINE L2 -64 3249 3069 1971 121 7 23 chr18 996543 996849 -85680699 - AluSx SINE Alu -11 301 1 951 310 154 37 chr18 996849 997488 -85680060 - L2 LINE L2 -244 3069 2301 2175 112 3 0 chr18 997488 997782 -85679766 + AluSx SINE Alu 1 295 -17 1436 118 98 0 chr18 997841 998087 -85679461 + L1MA8 LINE L1 6001 6270 -21 2084 143 0 0 chr18 998310 998610 -85678938 - AluSx SINE Alu -9 303 4 2019 158 0 7 chr18 998864 999162 -85678386 + AluSx SINE Alu 1 296 -16 180 310 42 14 chr18 999267 999338 -85678210 + L2 LINE L2 2689 2761 -553 417 294 35 161 chr18 1000318 1000683 -85676865 + L2 LINE L2 2851 3142 -130 1176 187 43 5 chr18 1000683 1000892 -85676656 + MER20 DNA MER1_type 1 217 -2 417 294 35 161 chr18 1000892 1001009 -85676539 + L2 LINE L2 3142 3272 0 2471 50 3 17 chr18 1001398 1001700 -85675848 - AluY SINE Alu -13 298 1 2268 109 0 13 chr18 1001749 1002062 -85675486 - AluSq SINE Alu -4 309 1 2166 138 0 0 chr18 1002083 1002395 -85675153 - AluSx SINE Alu 0 312 1 1949 162 16 22 chr18 1002541 1002905 -85674643 + L1MB8 LINE L1 5817 6178 0 2254 105 3 3 chr18 1003791 1004087 -85673461 - AluSx SINE Alu -16 296 1 795 206 17 120 chr18 1004196 1004488 -85673060 + L1MC4 LINE L1 7750 8011 -31 222 314 0 0 chr18 1004579 1004630 -85672918 + L2 LINE L2 3210 3260 -12 771 138 73 0 chr18 1006461 1006584 -85670964 + FLAM_A SINE Alu 11 142 0 2104 123 7 7 chr18 1006585 1006887 -85670661 + AluSx SINE Alu 1 302 -10 375 312 8 24 chr18 1006996 1007121 -85670427 + MIR SINE MIR 3 125 -137 25 31 0 0 chr18 1007182 1007214 -85670334 + AT_rich Low_complexity Low_complexity 1 32 0 221 203 24 49 chr18 1007232 1007355 -85670193 + (TA)n Simple_repeat Simple_repeat 1 120 0 2049 146 0 0 chr18 1007355 1007649 -85669899 - AluSg SINE Alu -16 294 1 862 123 0 36 chr18 1008800 1008938 -85668610 - FLAM_C SINE Alu 0 133 1 1527 179 33 4 chr18 1009433 1009753 -85667795 - AluJb SINE Alu 0 328 1 1262 165 23 5 chr18 1009822 1010040 -85667508 + AluJb SINE Alu 89 310 -2 1968 143 0 0 chr18 1010077 1010370 -85667178 + AluSx SINE Alu 1 293 -19 791 217 6 11 chr18 1010767 1010947 -85666601 - L1MC4 LINE L1 -374 7668 7490 1509 172 0 44 chr18 1011641 1011937 -85665611 - AluJo SINE Alu -5 307 25 381 324 64 12 chr18 1011943 1012116 -85665432 - MIR3 SINE MIR -9 199 18 2342 79 0 3 chr18 1012150 1012441 -85665107 + AluSq SINE Alu 1 290 -23 2437 79 0 3 chr18 1012562 1012866 -85664682 - AluY SINE Alu -8 303 1 21 0 0 0 chr18 1013211 1013232 -85664316 + AT_rich Low_complexity Low_complexity 1 21 0 312 125 306 0 chr18 1013232 1013304 -85664244 - MER58C DNA MER1_type -46 169 76 1208 168 5 5 chr18 1013342 1013538 -85664010 + AluJb SINE Alu 88 283 -29 440 233 11 0 chr18 1013539 1013629 -85663919 - MER58C DNA MER1_type -114 101 11 2154 132 0 0 chr18 1013809 1014104 -85663444 - AluSx SINE Alu -17 295 1 1007 147 29 135 chr18 1014756 1015001 -85662547 + MER20 DNA MER1_type 1 219 0 1895 170 0 7 chr18 1015080 1015386 -85662162 - AluJb SINE Alu -8 304 1 4610 84 69 34 chr18 1015443 1015537 -85662011 - L1PB2 LINE L1 -2 6149 6060 1505 93 0 24 chr18 1015537 1015742 -85661806 - AluSg/x SINE Alu -12 300 101 4610 84 69 34 chr18 1015742 1016099 -85661449 - L1PB2 LINE L1 -91 6060 5661 2205 110 3 0 chr18 1016099 1016398 -85661150 - AluSx SINE Alu -12 300 1 4610 84 69 34 chr18 1016398 1016674 -85660874 - L1PB2 LINE L1 -490 5661 5396 2352 72 10 16 chr18 1016694 1017001 -85660547 - AluY SINE Alu -6 305 1 2042 127 0 0 chr18 1017002 1017277 -85660271 - AluSx SINE Alu -37 275 1 2622 62 0 0 chr18 1017463 1017772 -85659776 - AluY SINE Alu -2 309 1 2295 93 10 3 chr18 1018811 1019113 -85658435 - AluSx SINE Alu -4 308 5 2548 66 0 0 chr18 1019286 1019588 -85657960 - AluY SINE Alu -9 302 1 2054 243 106 21 chr18 1019792 1020463 -85657085 + L2 LINE L2 506 1233 -2081 1218 126 0 11 chr18 1020756 1020930 -85656618 + FRAM SINE Alu 1 165 -11 2356 91 0 0 chr18 1021349 1021647 -85655901 + AluSg SINE Alu 1 298 -12 2394 93 3 3 chr18 1022748 1023050 -85654498 + AluSx SINE Alu 1 302 -10 2169 109 3 3 chr18 1023151 1023444 -85654104 + AluSp SINE Alu 1 293 -20 1473 168 78 4 chr18 1023651 1023919 -85653629 + AluJb SINE Alu 1 288 -24 1956 147 0 10 chr18 1024098 1024398 -85653150 - AluSq SINE Alu -16 297 1 2585 28 0 0 chr18 1024537 1024825 -85652723 - AluY SINE Alu -22 289 2 431 286 8 24 chr18 1024836 1024962 -85652586 - MIR SINE MIR -133 129 6 204 284 37 12 chr18 1025943 1026024 -85651524 - MIR SINE MIR -123 139 57 325 250 119 54 chr18 1026234 1026402 -85651146 - MLT1L LTR MaLR -102 513 335 2159 107 0 10 chr18 1026496 1026785 -85650763 + AluSq SINE Alu 1 286 -27 216 0 0 0 chr18 1026817 1026841 -85650707 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1812 164 0 0 chr18 1026843 1027124 -85650424 - AluJb SINE Alu -31 281 1 1758 163 0 3 chr18 1027661 1027950 -85649598 - AluJb SINE Alu -23 289 2 1134 159 26 60 chr18 1027952 1028185 -85649363 - AluJo SINE Alu -83 229 5 1552 147 7 63 chr18 1028223 1028536 -85649012 + AluJb SINE Alu 15 311 0 2323 107 0 0 chr18 1028828 1029127 -85648421 + AluSq SINE Alu 1 299 -14 1426 147 5 0 chr18 1029389 1029600 -85647948 + AluSp SINE Alu 87 298 -15 2430 67 3 0 chr18 1029684 1029984 -85647564 - AluY SINE Alu -10 301 1 2084 143 0 0 chr18 1030238 1030538 -85647010 + AluSx SINE Alu 4 303 -9 1436 118 98 0 chr18 1030761 1031007 -85646541 - L1MA8 LINE L1 -21 6270 6001 2205 109 7 0 chr18 1031066 1031359 -85646189 - AluSx SINE Alu -17 295 1 795 206 17 120 chr18 1031468 1031760 -85645788 + L1MC4 LINE L1 7750 8011 -31 222 314 0 0 chr18 1031851 1031902 -85645646 + L2 LINE L2 3210 3260 -12 751 146 73 0 chr18 1033733 1033856 -85643692 + FLAM_A SINE Alu 11 142 0 1932 152 3 7 chr18 1033857 1034160 -85643388 + AluSx SINE Alu 1 302 -10 375 312 8 24 chr18 1034269 1034394 -85643154 + MIR SINE MIR 3 125 -137 25 31 0 0 chr18 1034455 1034487 -85643061 + AT_rich Low_complexity Low_complexity 1 32 0 221 203 24 49 chr18 1034505 1034628 -85642920 + (TA)n Simple_repeat Simple_repeat 1 120 0 2028 146 0 0 chr18 1034628 1034922 -85642626 - AluSg SINE Alu -16 294 1 772 121 0 57 chr18 1036073 1036214 -85641334 - FLAM_C SINE Alu 0 133 1 281 283 21 19 chr18 1036559 1036671 -85640877 + MIR SINE MIR 9 124 -84 329 281 81 38 chr18 1037165 1037350 -85640198 + LTR16C LTR ERVL 299 491 0 1159 188 112 12 chr18 1037807 1038057 -85639491 - AluJo SINE Alu -11 301 27 1187 158 5 51 chr18 1038193 1038408 -85639140 + AluJo SINE Alu 87 291 -21 271 295 9 9 chr18 1038607 1038712 -85638836 + (TA)n Simple_repeat Simple_repeat 2 106 0 24 0 0 0 chr18 1038715 1038739 -85638809 + AT_rich Low_complexity Low_complexity 1 24 0 1944 163 0 3 chr18 1038850 1039157 -85638391 + AluSx SINE Alu 1 306 -6 611 190 26 0 chr18 1039157 1039273 -85638275 - MER7A DNA MER2_type -227 119 3 186 43 0 0 chr18 1039291 1039314 -85638234 + (GA)n Simple_repeat Simple_repeat 2 24 0 1548 205 142 25 chr18 1039324 1039719 -85637829 - MLT2B2 LTR ERVL -74 441 1 2394 85 0 0 chr18 1039719 1040014 -85637534 + AluY SINE Alu 1 295 -16 384 296 111 13 chr18 1040025 1040282 -85637266 - ERVL-C1 LTR ERVL -5353 321 1 228 182 0 0 chr18 1040295 1040339 -85637209 - MLT2C1 LTR ERVL -9 511 468 183 156 0 0 chr18 1040350 1040382 -85637166 + (CATA)n Simple_repeat Simple_repeat 3 34 0 1750 179 46 22 chr18 1040383 1040751 -85636797 - MLT2C1 LTR ERVL -20 377 1 32 26 0 0 chr18 1040864 1040903 -85636645 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr18 1040940 1040963 -85636585 + AT_rich Low_complexity Low_complexity 1 23 0 1714 156 12 41 chr18 1041738 1042058 -85635490 - AluJb SINE Alu 0 312 2 395 263 150 23 chr18 1042960 1043093 -85634455 + MIR SINE MIR 46 195 -67 11169 80 19 25 chr18 1043235 1044778 -85632770 + MER41A-int LTR ERV1 4411 5944 -2 3527 70 29 0 chr18 1044778 1045234 -85632314 + MER41A LTR ERV1 1 469 -85 2384 78 7 3 chr18 1045283 1045577 -85631971 - AluSq SINE Alu -18 295 1 21 0 0 0 chr18 1045793 1045814 -85631734 + AT_rich Low_complexity Low_complexity 1 21 0 1949 120 38 0 chr18 1045814 1046106 -85631442 - L1PA16 LINE L1 -9 6157 5855 377 293 23 30 chr18 1046711 1046844 -85630704 - MIR3 SINE MIR -25 183 52 2361 72 3 16 chr18 1047127 1047434 -85630114 - AluY SINE Alu -8 303 1 231 36 0 0 chr18 1047874 1047902 -85629646 + (A)n Simple_repeat Simple_repeat 1 28 0 2050 91 6 70 chr18 1048111 1048442 -85629106 + AluSx SINE Alu 1 310 -2 709 164 43 27 chr18 1048717 1048749 -85628799 + L1MB4 LINE L1 5782 5812 -368 2313 95 7 0 chr18 1048749 1049044 -85628504 + AluSq SINE Alu 2 298 -15 709 164 43 27 chr18 1049044 1049225 -85628323 + L1MB4 LINE L1 5812 6108 -72 413 179 57 57 chr18 1049241 1049347 -85628201 + MER74A LTR ERVL 453 558 0 2219 115 0 7 chr18 1049993 1050289 -85627259 + AluSx SINE Alu 1 294 -18 871 174 2 7 chr18 1050616 1050781 -85626767 + L1MD2 LINE L1 5659 5824 -356 855 126 8 0 chr18 1050781 1050900 -85626648 + FLAM_C SINE Alu 1 120 -23 180 0 0 0 chr18 1050900 1050920 -85626628 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1672 178 16 29 chr18 1050920 1051426 -85626122 + L1MA9 LINE L1 5817 6306 -6 269 314 177 0 chr18 1051553 1051677 -85625871 + MIR3 SINE MIR 48 193 -15 1999 116 14 14 chr18 1051823 1052117 -85625431 + AluSx SINE Alu 1 294 -18 1108 140 0 6 chr18 1052679 1052850 -85624698 - AluJb SINE Alu -13 299 130 2212 118 0 0 chr18 1052869 1053166 -85624382 + AluSx SINE Alu 1 297 -15 1633 158 4 0 chr18 1053166 1053420 -85624128 + AluSx SINE Alu 58 312 0 1866 153 0 7 chr18 1054336 1054631 -85622917 - AluSx SINE Alu -19 293 1 2004 127 0 23 chr18 1055379 1055686 -85621862 + AluSx SINE Alu 1 300 -12 28 48 0 0 chr18 1056600 1056642 -85620906 + AT_rich Low_complexity Low_complexity 1 42 0 274 153 5 5 chr18 1057408 1057591 -85619957 + AluJo SINE Alu 1 282 -20 209 182 0 0 chr18 1057594 1057627 -85619921 + (CA)n Simple_repeat Simple_repeat 2 34 0 1539 170 8 0 chr18 1058005 1058258 -85619290 + AluJo SINE Alu 1 255 -57 2217 133 0 0 chr18 1058657 1058965 -85618583 - AluSg SINE Alu -2 308 1 952 123 0 22 chr18 1059193 1059331 -85618217 + AluJo SINE Alu 1 135 -177 2157 105 3 3 chr18 1059654 1059940 -85617608 + AluSq SINE Alu 1 286 -27 806 234 26 5 chr18 1060594 1060786 -85616762 + MLT1E1 LTR MaLR 1 196 -458 2067 135 0 0 chr18 1060820 1061109 -85616439 - AluSq SINE Alu -24 289 1 369 0 0 0 chr18 1061114 1061155 -85616393 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1359 205 40 91 chr18 1062045 1062465 -85615083 + MLT1E1 LTR MaLR 178 576 -78 258 221 59 0 chr18 1062465 1062533 -85615015 - L1M4 LINE L1 -1609 4537 4466 233 250 0 43 chr18 1062550 1062642 -85614906 - HAL1b LINE L1 -621 727 640 1446 140 4 60 chr18 1062662 1062765 -85614783 - AluSx SINE Alu -76 236 129 1930 98 30 4 chr18 1062765 1063030 -85614518 - AluSc SINE Alu -20 289 18 1446 140 4 60 chr18 1063030 1063176 -85614372 - AluSx SINE Alu -183 129 1 1479 97 0 0 chr18 1064049 1064235 -85613313 + AluSx SINE Alu 1 186 -126 503 69 0 0 chr18 1064239 1064297 -85613251 + AluSx SINE Alu 234 291 -21 506 258 15 0 chr18 1064360 1064492 -85613056 + LTR16C LTR ERVL 358 491 0 472 236 32 8 chr18 1064497 1064620 -85612928 + MER69 DNA AcHobo 6 131 -2395 335 198 25 25 chr18 1064628 1064709 -85612839 + MER69 DNA AcHobo 2446 2526 0 465 269 66 12 chr18 1064710 1064877 -85612671 + L2 LINE L2 3133 3308 -5 2106 114 0 0 chr18 1065199 1065502 -85612046 + AluSg SINE Alu 1 303 0 21 71 0 0 chr18 1065578 1065620 -85611928 + AT_rich Low_complexity Low_complexity 1 42 0 334 209 91 27 chr18 1065693 1065900 -85611648 - MLT1H LTR MaLR -168 374 152 2506 184 99 52 chr18 1065906 1066279 -85611269 - L1MB7 LINE L1 -14 6170 5816 2188 104 3 7 chr18 1066279 1066603 -85610945 - AluSp SINE Alu 0 313 1 2506 184 99 52 chr18 1066603 1066688 -85610860 - L1MB7 LINE L1 -368 5816 5736 1906 131 3 24 chr18 1066688 1067000 -85610548 + AluSx SINE Alu 1 306 0 2506 184 99 52 chr18 1067000 1067176 -85610372 - L1MB7 LINE L1 -448 5736 5504 249 139 0 0 chr18 1067267 1067303 -85610245 + MADE1 DNA Mariner 5 40 -40 303 0 47 47 chr18 1067374 1067417 -85610131 - MADE1 DNA Mariner -39 41 5 376 281 25 0 chr18 1067420 1067541 -85610007 - L1MC5 LINE L1 -527 7434 7311 296 336 27 14 chr18 1067546 1067692 -85609856 - L1MC4 LINE L1 -616 7426 7279 837 152 0 0 chr18 1067812 1067937 -85609611 + FRAM SINE Alu 21 145 -31 28 0 0 0 chr18 1067936 1067964 -85609584 + AT_rich Low_complexity Low_complexity 1 28 0 * 2243 92 10 3 chr18 1068076 1068368 -85609180 + AluSq SINE Alu 1 294 -19 354 23 0 0 chr18 1068766 1068809 -85608739 + (CA)n Simple_repeat Simple_repeat 2 44 0 2444 80 0 0 chr18 1068830 1069118 -85608430 + AluSx SINE Alu 5 292 -20 268 366 115 5 chr18 1069579 1069770 -85607778 + MIR SINE MIR 10 221 -41 2204 108 0 3 chr18 1070531 1070819 -85606729 + AluSx SINE Alu 2 288 -24 1834 125 6 60 chr18 1070839 1071158 -85606390 + AluSq SINE Alu 1 302 -11 396 296 15 23 chr18 1071330 1071462 -85606086 - MER20B DNA MER1_type -652 131 1 218 361 41 0 chr18 1071844 1071941 -85605607 + MIR SINE MIR 107 207 -55 307 220 211 46 chr18 1072116 1072225 -85605323 - MER5A DNA MER1_type -16 173 47 182 326 101 0 chr18 1072282 1072411 -85605137 + MIR SINE MIR 94 235 -27 743 150 0 0 chr18 1073326 1073487 -85604061 + FLAM_C SINE Alu 2 162 0 2054 96 0 84 chr18 1073715 1074038 -85603510 + AluSx SINE Alu 1 296 -16 2787 17 0 0 chr18 1074201 1074500 -85603048 + AluY SINE Alu 1 299 -12 2041 49 4 0 chr18 1074793 1075040 -85602508 + L1PA5 LINE L1 5899 6146 -8 228 67 0 0 chr18 1075206 1075236 -85602312 + (T)n Simple_repeat Simple_repeat 1 30 0 254 199 81 97 chr18 1075458 1075644 -85601904 + L1ME LINE L1 813 995 -5210 189 0 0 0 chr18 1075645 1075666 -85601882 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1128 107 0 0 chr18 1075668 1075818 -85601730 - AluSg/x SINE Alu -26 286 137 591 238 169 55 chr18 1075821 1076227 -85601321 + L1ME LINE L1 981 1339 -4876 2500 93 0 40 chr18 1076227 1076263 -85601285 + MER46B DNA MER2_type 1 37 -2694 2148 130 3 0 chr18 1076263 1076556 -85600992 + AluSg SINE Alu 1 294 -16 2500 93 0 40 chr18 1076556 1076751 -85600797 + MER46B DNA MER2_type 37 89 -2642 1829 135 50 3 chr18 1076751 1077033 -85600515 - AluJb SINE Alu -17 295 1 2500 93 0 40 chr18 1077033 1077175 -85600373 + MER46B DNA MER2_type 89 235 -1 591 238 169 55 chr18 1077175 1077242 -85600306 + L1ME LINE L1 1339 1508 -4707 735 250 128 35 chr18 1077279 1077944 -85599604 + L1ME LINE L1 1862 2555 -3660 2422 93 3 6 chr18 1078277 1078590 -85598958 - AluSx SINE Alu 0 312 1 2412 77 0 7 chr18 1078645 1078945 -85598603 - AluSc SINE Alu -11 298 1 1959 116 18 0 chr18 1079205 1079482 -85598066 - AluSx SINE Alu -30 282 1 2660 43 0 0 chr18 1081977 1082278 -85595270 - AluY SINE Alu -10 301 1 2687 39 0 3 chr18 1083521 1083833 -85593715 - AluY SINE Alu 0 311 1 1995 129 4 4 chr18 1084412 1084692 -85592856 - AluJb SINE Alu -32 280 1 2481 64 3 0 chr18 1084723 1085018 -85592530 + AluY SINE Alu 1 296 -15 2131 98 7 0 chr18 1085075 1085350 -85592198 + AluSx SINE Alu 21 297 -15 236 273 45 0 chr18 1085946 1086012 -85591536 + MLT1K LTR MaLR 517 585 -3 507 279 87 19 chr18 1086241 1086389 -85591159 + LTR33 LTR ERVL 299 466 -55 1835 155 13 16 chr18 1086389 1086698 -85590850 - AluJo SINE Alu -4 308 1 507 279 87 19 chr18 1086698 1086757 -85590791 + LTR33 LTR ERVL 466 520 -1 1917 152 7 0 chr18 1086954 1087243 -85590305 - AluSx SINE Alu -21 291 1 1823 169 35 0 chr18 1087398 1087688 -85589860 + AluJb SINE Alu 1 300 -12 3465 207 67 22 chr18 1088593 1089833 -85587715 - L1ME2 LINE L1 -9 6155 4866 1420 75 0 11 chr18 1089834 1090022 -85587526 - AluSg/x SINE Alu -7 303 118 2674 199 79 29 chr18 1090022 1090781 -85586767 - L1ME2 LINE L1 -1315 4831 4035 1867 209 47 12 chr18 1090795 1091288 -85586260 - L1ME2 LINE L1 -2537 3609 3100 2357 70 3 0 chr18 1091290 1091589 -85585959 - AluY SINE Alu -1 310 11 2096 94 21 0 chr18 1091596 1091884 -85585664 - AluSx SINE Alu -7 305 12 212 261 69 39 chr18 1093095 1093225 -85584323 + MIR SINE MIR 17 150 -58 1174 157 60 19 chr18 1093869 1094104 -85583444 - AluJb SINE Alu 0 312 86 340 215 237 0 chr18 1094282 1094417 -85583131 + MIR SINE MIR 92 258 -4 726 179 51 45 chr18 1094419 1094575 -85582973 + FRAM SINE Alu 1 157 -19 2077 125 0 3 chr18 1094680 1094967 -85582581 + AluJo SINE Alu 1 286 -26 2037 124 7 0 chr18 1095310 1095600 -85581948 - AluSx SINE Alu -20 292 1 908 131 0 0 chr18 1096568 1096698 -85580850 - FLAM_C SINE Alu 0 133 4 2045 129 0 3 chr18 1096929 1097238 -85580310 + AluSx SINE Alu 1 308 0 362 248 101 34 chr18 1097244 1097393 -85580155 + MIR SINE MIR 72 230 -32 742 157 9 0 chr18 1097766 1097881 -85579667 + FLAM_C SINE Alu 3 118 -15 29 28 0 0 chr18 1097881 1097917 -85579631 + AT_rich Low_complexity Low_complexity 1 36 0 2390 109 0 0 chr18 1097970 1098273 -85579275 + AluSx SINE Alu 1 303 -9 2313 98 0 0 chr18 1099075 1099362 -85578186 - AluSx SINE Alu -25 287 1 232 218 39 39 chr18 1099561 1099639 -85577909 - MIR3 SINE MIR -21 187 110 2110 133 3 3 chr18 1100183 1100483 -85577065 + AluSx SINE Alu 1 300 -12 2047 123 23 13 chr18 1100628 1100929 -85576619 - AluSx SINE Alu 0 312 9 2581 137 26 10 chr18 1100937 1101352 -85576196 - MSTA LTR MaLR -6 422 1 258 346 0 19 chr18 1101352 1101459 -85576089 - L2 LINE L2 -192 3080 2976 21 57 0 0 chr18 1102270 1102305 -85575243 + AT_rich Low_complexity Low_complexity 1 35 0 848 213 6 12 chr18 1102326 1102495 -85575053 - FRAM SINE Alu -8 168 1 2077 144 0 7 chr18 1102500 1102798 -85574750 - AluSx SINE Alu -16 296 1 1888 137 6 35 chr18 1102802 1103116 -85574432 - AluSq SINE Alu -8 305 1 1157 109 6 6 chr18 1103126 1103319 -85574229 - AluSg/x SINE Alu 0 327 134 2342 74 3 13 chr18 1103319 1103618 -85573930 - AluY SINE Alu -15 296 1 1444 132 91 4 chr18 1103625 1103868 -85573680 - L1MC1 LINE L1 0 6333 6070 2356 99 0 16 chr18 1104177 1104489 -85573059 - AluSq SINE Alu -6 307 1 2343 107 0 0 chr18 1104995 1105294 -85572254 - AluSq SINE Alu -14 299 1 1578 147 7 63 chr18 1105585 1105898 -85571650 - AluJb SINE Alu 0 311 15 1141 159 26 60 chr18 1105936 1106169 -85571379 + AluJo SINE Alu 5 229 -83 1780 163 0 3 chr18 1106171 1106460 -85571088 + AluJb SINE Alu 2 289 -23 1837 164 0 0 chr18 1106998 1107305 -85570243 + AluJb SINE Alu 1 307 0 2099 126 0 0 chr18 1107337 1107623 -85569925 - AluSq SINE Alu -27 286 1 2112 125 0 0 chr18 1107945 1108253 -85569295 - AluSx SINE Alu 0 312 5 2652 56 0 0 chr18 1108581 1108887 -85568661 + AluY SINE Alu 1 306 -5 720 115 62 0 chr18 1109224 1109337 -85568211 + L1MC4 LINE L1 6949 7068 -974 760 140 13 60 chr18 1109347 1109497 -85568051 + FLAM_C SINE Alu 1 143 0 2132 229 161 6 chr18 1109550 1110228 -85567320 + L1MC4 LINE L1 7130 7912 -130 1530 140 13 0 chr18 1110435 1110664 -85566884 - AluSg/x SINE Alu -1 311 80 282 159 0 0 chr18 1110665 1110709 -85566839 - Alu SINE Alu -258 44 1 924 137 78 0 chr18 1111618 1111771 -85565777 + FRAM SINE Alu 1 165 -11 236 330 0 0 chr18 1111987 1112075 -85565473 + MIR SINE MIR 45 132 -76 2118 123 36 3 chr18 1112465 1112767 -85564781 - AluSq SINE Alu -1 312 1 1823 143 3 20 chr18 1113460 1113761 -85563787 + AluJo SINE Alu 16 311 -1 3293 210 48 45 chr18 1114581 1115429 -85562119 - MER21B LTR ERV1 -1 862 12 2193 127 0 3 chr18 1115510 1115810 -85561738 + AluSx SINE Alu 1 299 -13 516 324 77 27 chr18 1116708 1116902 -85560646 - L3 LINE CR1 -2 1575 1359 2310 118 0 0 chr18 1116902 1117207 -85560341 - AluSq SINE Alu -8 305 1 516 324 77 27 chr18 1117207 1117311 -85560237 - L3 LINE CR1 -218 1359 1262 450 240 173 0 chr18 1117603 1117753 -85559795 + MER5A DNA MER1_type 14 189 0 197 159 222 0 chr18 1117891 1117954 -85559594 + MIR SINE MIR 75 151 -111 724 182 8 8 chr18 1119788 1119920 -85557628 + AluSq/x SINE Alu 2 133 -180 1588 181 3 21 chr18 1119940 1120227 -85557321 + AluJo SINE Alu 13 294 -18 388 268 73 30 chr18 1120388 1120552 -85556996 + MIR SINE MIR 8 178 -84 1513 159 0 4 chr18 1120557 1120789 -85556759 - AluJb SINE Alu -24 288 58 2484 74 0 7 chr18 1120797 1121107 -85556441 + AluY SINE Alu 1 308 -3 374 161 14 14 chr18 1121107 1121177 -85556371 - AluS SINE Alu -248 60 1 1540 79 0 0 chr18 1122181 1122371 -85555177 - AluSg/x SINE Alu -2 308 119 593 218 39 1 chr18 1122388 1122513 -85555035 + MLT1D LTR MaLR 291 388 -2 280 321 57 19 chr18 1123122 1123228 -85554320 - L2 LINE L2 -36 3236 3127 266 183 0 17 chr18 1123296 1123356 -85554192 - L2 LINE L2 -86 3227 3169 231 114 0 0 chr18 1123825 1123860 -85553688 + (TG)n Simple_repeat Simple_repeat 2 36 0 21 57 0 0 chr18 1123975 1124010 -85553538 + AT_rich Low_complexity Low_complexity 1 35 0 2155 108 3 7 chr18 1124377 1124673 -85552875 + AluSx SINE Alu 1 295 -17 1847 183 146 32 chr18 1125002 1125494 -85552054 - LTR10A LTR ERV1 -61 548 1 2169 97 17 13 chr18 1125638 1125936 -85551612 - AluSg SINE Alu -11 299 1 220 314 78 0 chr18 1126551 1126653 -85550895 + MIR3 SINE MIR 64 173 -35 1763 157 63 6 chr18 1126674 1126993 -85550555 - MER1B DNA MER1_type 0 337 1 1994 94 0 8 chr18 1127277 1127542 -85550006 - AluSg SINE Alu -47 263 1 281 250 106 19 chr18 1127605 1127709 -85549839 + L1ME4a LINE L1 5982 6094 -27 335 206 59 0 chr18 1127710 1127778 -85549770 - Tigger5 DNA MER2_type -1 2322 2251 330 200 0 0 chr18 1127747 1127802 -85549746 - Tigger5 DNA MER2_type -2268 55 1 * 23 33 0 0 chr18 1128019 1128049 -85549499 + AT_rich Low_complexity Low_complexity 1 30 0 2282 110 0 3 chr18 1128124 1128434 -85549114 - AluSx SINE Alu -3 309 1 2253 82 0 0 chr18 1128469 1128793 -85548755 - AluY SINE Alu 0 324 1 2029 117 29 0 chr18 1129200 1129481 -85548067 + AluSx SINE Alu 1 289 -23 32 43 0 0 chr18 1129481 1129527 -85548021 + AT_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr18 1130049 1130070 -85547478 + AT_rich Low_complexity Low_complexity 1 21 0 2129 138 0 0 chr18 1130083 1130380 -85547168 + AluSx SINE Alu 1 297 -15 240 164 60 45 chr18 1130388 1130455 -85547093 - L1ME3A LINE L1 -104 6066 5999 239 178 27 110 chr18 1130611 1130652 -85546896 - LTR37B LTR ERV1 0 468 434 2509 72 0 19 chr18 1130652 1130959 -85546589 + AluSg SINE Alu 1 301 -9 239 178 27 110 chr18 1130959 1130990 -85546558 - LTR37B LTR ERV1 -34 434 402 2232 126 3 0 chr18 1130991 1131301 -85546247 + AluSx SINE Alu 1 311 -1 650 237 41 46 chr18 1131316 1131535 -85546013 - LTR37B LTR ERV1 -53 415 198 795 179 10 97 chr18 1131589 1131722 -85545826 - LTR37B LTR ERV1 -285 183 71 1502 147 4 0 chr18 1131722 1131947 -85545601 + AluJo SINE Alu 87 312 0 795 179 10 97 chr18 1131947 1132009 -85545539 - LTR37B LTR ERV1 -397 71 5 337 279 104 5 chr18 1132016 1132217 -85545331 - L1ME3A LINE L1 -243 5923 5703 307 282 18 0 chr18 1132628 1132738 -85544810 + MER94 DNA DNA 8 119 -15 413 272 36 2 chr18 1133360 1133501 -85544047 + MIR SINE MIR 20 166 -65 2299 116 0 3 chr18 1133656 1133959 -85543589 + AluSx SINE Alu 1 302 -10 883 232 45 0 chr18 1134321 1134519 -85543029 + LTR16A1 LTR ERVL 251 457 0 305 265 20 105 chr18 1134543 1134743 -85542805 - MER112 DNA MER1_type -11 249 67 309 301 0 0 chr18 1134774 1134847 -85542701 - MER112 DNA MER1_type -187 73 1 955 228 43 16 chr18 1135221 1135475 -85542073 - MIR SINE MIR 0 262 2 599 289 50 70 chr18 1136002 1136345 -85541203 + MLT1I LTR MaLR 70 405 -4 575 274 75 43 chr18 1136638 1137021 -85540527 + L1ME4a LINE L1 5332 5701 -420 2538 50 3 0 chr18 1137021 1137320 -85540228 + AluY SINE Alu 1 300 -11 414 0 0 0 chr18 1137320 1137366 -85540182 + (TA)n Simple_repeat Simple_repeat 2 47 0 575 274 75 43 chr18 1137366 1137483 -85540065 + L1ME4a LINE L1 5700 5849 -272 360 0 0 0 chr18 1138011 1138051 -85539497 + (CA)n Simple_repeat Simple_repeat 2 41 0 348 225 9 54 chr18 1138156 1138253 -85539295 + CT-rich Low_complexity Low_complexity 3 96 -12 2311 114 3 3 chr18 1138253 1138561 -85538987 - AluSx SINE Alu -4 308 1 348 225 9 54 chr18 1138561 1138574 -85538974 + CT-rich Low_complexity Low_complexity 96 108 0 222 218 73 0 chr18 1139468 1139523 -85538025 + L2 LINE L2 3214 3272 0 236 200 77 0 chr18 1139947 1140012 -85537536 - L1ME4a LINE L1 -74 6047 5978 * 251 255 64 11 chr18 1140007 1140101 -85537447 - L1ME3A LINE L1 -440 5681 5583 1949 125 7 14 chr18 1140182 1140471 -85537077 - AluSx SINE Alu -24 288 2 1729 127 33 0 chr18 1141861 1142137 -85535411 - L1MB3 LINE L1 0 6183 5899 195 42 0 0 chr18 1142137 1142161 -85535387 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 464 113 0 0 chr18 1142161 1142223 -85535325 - AluJ/FRAM SINE Alu -21 291 230 1246 117 48 0 chr18 1142223 1142429 -85535119 - L1MB3 LINE L1 -281 5902 5687 2138 112 0 0 chr18 1142640 1142916 -85534632 + AluSx SINE Alu 1 276 -36 237 33 0 0 chr18 1142922 1142952 -85534596 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 1888 132 21 7 chr18 1143143 1143430 -85534118 - AluJb SINE Alu -20 292 2 252 297 91 30 chr18 1143637 1143748 -85533800 + MIR SINE MIR 29 155 -107 2467 163 115 8 chr18 1143748 1144245 -85533303 + MER44D DNA MER2_type 1 605 0 252 297 91 30 chr18 1144245 1144298 -85533250 + MIR SINE MIR 155 203 -59 1965 209 111 20 chr18 1144459 1145153 -85532395 - Charlie2 DNA MER1_type 0 2862 2106 658 270 70 15 chr18 1145168 1145438 -85532110 + L2 LINE L2 2951 3235 -78 2260 113 3 3 chr18 1145704 1146014 -85531534 + AluSx SINE Alu 1 310 -2 2251 197 49 6 chr18 1146032 1146498 -85531050 - MER66B LTR ERV1 0 486 1 1910 124 22 65 chr18 1146539 1146861 -85530687 + AluSx SINE Alu 1 308 -4 2005 94 12 68 chr18 1147197 1147537 -85530011 + MER4B LTR ERV1 1 321 -289 1945 97 38 14 chr18 1147544 1147834 -85529714 - AluSg SINE Alu -13 297 1 1062 105 4 23 chr18 1147837 1148027 -85529521 + MER4E LTR ERV1 618 766 0 1602 78 9 23 chr18 1148099 1148317 -85529231 + AluSq SINE Alu 1 215 -98 2405 98 0 16 chr18 1148498 1148816 -85528732 - AluSq SINE Alu 0 313 1 2343 107 0 0 chr18 1149322 1149621 -85527927 - AluSq SINE Alu -14 299 1 1578 147 7 63 chr18 1149912 1150225 -85527323 - AluJb SINE Alu 0 311 15 1141 159 26 60 chr18 1150263 1150496 -85527052 + AluJo SINE Alu 5 229 -83 1780 163 0 3 chr18 1150498 1150787 -85526761 + AluJb SINE Alu 2 289 -23 1837 164 0 0 chr18 1151325 1151632 -85525916 + AluJb SINE Alu 1 307 0 2099 126 0 0 chr18 1151664 1151950 -85525598 - AluSq SINE Alu -27 286 1 2112 125 0 0 chr18 1152272 1152580 -85524968 - AluSx SINE Alu 0 312 5 2652 56 0 0 chr18 1152908 1153214 -85524334 + AluY SINE Alu 1 306 -5 720 115 62 0 chr18 1153551 1153664 -85523884 + L1MC4 LINE L1 6949 7068 -974 760 140 13 60 chr18 1153674 1153824 -85523724 + FLAM_C SINE Alu 1 143 0 2132 229 161 6 chr18 1153877 1154555 -85522993 + L1MC4 LINE L1 7130 7912 -130 1530 140 13 0 chr18 1154762 1154991 -85522557 - AluSg/x SINE Alu -1 309 78 282 159 0 0 chr18 1154992 1155036 -85522512 - Alu SINE Alu -258 44 1 924 137 78 0 chr18 1155945 1156098 -85521450 + FRAM SINE Alu 1 165 -11 236 330 0 0 chr18 1156314 1156402 -85521146 + MIR SINE MIR 45 132 -76 2118 123 36 3 chr18 1156792 1157094 -85520454 - AluSq SINE Alu -1 312 1 1823 143 3 20 chr18 1157787 1158088 -85519460 + AluJo SINE Alu 16 311 -1 3293 210 48 45 chr18 1158908 1159756 -85517792 - MER21B LTR ERV1 -1 862 12 2193 127 0 3 chr18 1159837 1160137 -85517411 + AluSx SINE Alu 1 299 -13 516 324 77 27 chr18 1161035 1161229 -85516319 - L3 LINE CR1 -2 1575 1359 2310 118 0 0 chr18 1161229 1161534 -85516014 - AluSq SINE Alu -8 305 1 516 324 77 27 chr18 1161534 1161638 -85515910 - L3 LINE CR1 -218 1359 1262 450 240 173 0 chr18 1161930 1162080 -85515468 + MER5A DNA MER1_type 14 189 0 197 159 222 0 chr18 1162218 1162281 -85515267 + MIR SINE MIR 75 151 -111 724 182 8 8 chr18 1164115 1164247 -85513301 + AluSq/x SINE Alu 2 133 -180 1588 181 3 21 chr18 1164267 1164554 -85512994 + AluJo SINE Alu 13 294 -18 388 268 73 30 chr18 1164715 1164879 -85512669 + MIR SINE MIR 8 178 -84 1513 159 0 4 chr18 1164884 1165116 -85512432 - AluJb SINE Alu -24 288 58 2493 74 0 6 chr18 1165124 1165435 -85512113 + AluY SINE Alu 1 309 -2 374 161 14 14 chr18 1165435 1165505 -85512043 - AluS SINE Alu -243 60 1 2003 118 3 59 chr18 1166485 1166513 -85511035 - AluSx SINE Alu -8 304 276 185 0 0 39 chr18 1166513 1166539 -85511009 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 2003 118 3 59 chr18 1166539 1166832 -85510716 - AluSx SINE Alu -36 276 1 1486 152 25 142 chr18 1166884 1167278 -85510270 + MER7A DNA MER2_type 1 346 0 2132 96 0 51 chr18 1168258 1168572 -85508976 + AluSx SINE Alu 1 298 -14 1174 127 0 12 chr18 1168572 1168745 -85508803 + AluSg/x SINE Alu 134 304 -8 315 335 6 24 chr18 1169103 1169270 -85508278 - MIR3 SINE MIR -7 201 38 380 299 98 14 chr18 1169333 1169547 -85508001 + MIR SINE MIR 29 260 -2 2254 113 3 0 chr18 1169913 1170213 -85507335 + AluSx SINE Alu 1 301 -11 2514 119 67 7 chr18 1172757 1173160 -85504388 - MSTA LTR MaLR 0 428 2 213 342 25 17 chr18 1173197 1173317 -85504231 - MIR SINE MIR -126 136 16 180 186 29 114 chr18 1173836 1173906 -85503642 - MIR SINE MIR -121 141 78 2181 105 7 7 chr18 1174603 1174899 -85502649 + AluSq SINE Alu 1 296 -17 24 32 0 0 chr18 1175682 1175713 -85501835 + AT_rich Low_complexity Low_complexity 1 31 0 2187 125 3 7 chr18 1177345 1177650 -85499898 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr18 1178137 1178158 -85499390 + AT_rich Low_complexity Low_complexity 1 21 0 736 180 0 8 chr18 1178173 1178295 -85499253 - FLAM_C SINE Alu -18 125 5 1683 128 75 14 chr18 1179097 1179378 -85498170 + AluSx SINE Alu 1 298 -14 922 189 0 0 chr18 1179466 1179609 -85497939 - FRAM SINE Alu -34 142 1 2131 94 4 0 chr18 1179790 1180057 -85497491 + AluSx SINE Alu 39 306 -6 391 350 47 39 chr18 1180532 1180918 -85496630 - L3 LINE CR1 -247 1330 942 685 206 170 0 chr18 1181213 1181407 -85496141 + L1MD2 LINE L1 6068 6294 -65 189 0 0 0 chr18 1181412 1181433 -85496115 + (A)n Simple_repeat Simple_repeat 1 21 0 382 211 103 27 chr18 1181703 1181793 -85495755 - L1MB3 LINE L1 0 6180 6078 1488 26 0 4 chr18 1181793 1182057 -85495491 + (CACCAT)n Simple_repeat Simple_repeat 1 263 0 382 211 103 27 chr18 1182057 1182097 -85495451 - L1MB3 LINE L1 -102 6078 6042 1371 47 0 0 chr18 1182097 1182375 -85495173 + (CACCAT)n Simple_repeat Simple_repeat 1 278 0 677 178 7 7 chr18 1182377 1182523 -85495025 - L1MB3 LINE L1 -103 6080 5935 595 270 115 5 chr18 1182523 1182723 -85494825 + Charlie8 DNA MER1_type 48 269 -2148 24702 25 0 3 chr18 1183118 1186774 -85490774 + L1PA3 LINE L1 2499 6155 0 2318 78 17 0 chr18 1187289 1187582 -85489966 - AluSp SINE Alu -15 298 1 422 278 148 47 chr18 1188717 1189034 -85488514 - L2 LINE L2 -16 3297 2949 443 168 35 119 chr18 1189112 1189205 -85488343 - L2 LINE L2 -519 2795 2717 1848 132 35 7 chr18 1189205 1189492 -85488056 - AluSx SINE Alu -17 295 1 443 168 35 119 chr18 1189492 1189541 -85488007 - L2 LINE L2 -597 2717 2665 2185 73 73 3 chr18 1192059 1192345 -85485203 + AluSx SINE Alu 2 307 -5 2393 67 3 0 chr18 1192466 1192751 -85484797 - AluY SINE Alu -25 286 1 2088 109 16 7 chr18 1193790 1194093 -85483455 - AluSg SINE Alu -4 306 1 289 279 23 0 chr18 1194224 1194310 -85483238 - L2 LINE L2 -1396 1918 1831 460 263 29 57 chr18 1194443 1194652 -85482896 + MLT1L LTR MaLR 6 208 -407 1249 209 66 97 chr18 1194994 1195560 -85481988 - L1ME LINE L1 -690 5545 4963 1624 192 18 3 chr18 1195560 1195846 -85481702 - AluJb SINE Alu -22 290 1 1249 209 66 97 chr18 1195846 1196091 -85481457 - L1ME LINE L1 -1272 4963 4776 2290 115 3 0 chr18 1196091 1196396 -85481152 - AluSx SINE Alu -6 306 1 1249 209 66 97 chr18 1196396 1196433 -85481115 - L1ME LINE L1 -1459 4776 4739 695 198 114 12 chr18 1196437 1196604 -85480944 - MER58A DNA MER1_type -3 221 38 2853 230 61 65 chr18 1196636 1196981 -85480567 - L1ME LINE L1 -1480 4735 4390 1993 120 36 73 chr18 1196981 1197088 -85480460 + MER7A DNA MER2_type 4 113 -2925 2109 113 3 0 chr18 1197088 1197397 -85480151 - AluSx SINE Alu 0 310 1 1993 120 36 73 chr18 1197397 1197646 -85479902 + MER7A DNA MER2_type 113 346 0 2853 230 61 65 chr18 1197646 1198350 -85479198 - L1ME LINE L1 -1825 4390 3688 2175 94 0 33 chr18 1198350 1198657 -85478891 - AluSg SINE Alu -13 297 1 2853 230 61 65 chr18 1198657 1198721 -85478827 - L1ME LINE L1 -2527 3688 3625 428 297 73 46 chr18 1198920 1199179 -85478369 - L1ME LINE L1 -6031 365 100 541 239 56 46 chr18 1199219 1199416 -85478132 + AluSg/x SINE Alu 99 297 -15 2150 130 0 7 chr18 1199478 1199777 -85477771 + AluSq SINE Alu 1 297 -16 1495 168 78 4 chr18 1199956 1200224 -85477324 - AluJb SINE Alu -24 288 1 2184 109 3 3 chr18 1200431 1200724 -85476824 - AluSp SINE Alu -20 293 1 2412 93 3 3 chr18 1200825 1201127 -85476421 - AluSx SINE Alu -10 302 1 2229 244 113 24 chr18 1202201 1202225 -85475323 + L2 LINE L2 1982 2002 -1312 2274 100 0 3 chr18 1202225 1202524 -85475024 - AluSg SINE Alu -12 298 1 2229 244 113 24 chr18 1202524 1203371 -85474177 + L2 LINE L2 2002 2931 -383 826 220 54 45 chr18 1203377 1203600 -85473948 + MIR SINE MIR 4 228 -34 1453 227 161 35 chr18 1203688 1203908 -85473640 - L1ME3A LINE L1 -11 6159 5968 1907 172 0 7 chr18 1203908 1204210 -85473338 + AluJb SINE Alu 1 300 -12 1453 227 161 35 chr18 1204210 1204592 -85472956 - L1ME3A LINE L1 -202 5968 5481 1234 114 0 0 chr18 1204592 1204759 -85472789 - AluSg/x SINE Alu -17 293 127 646 232 61 5 chr18 1204766 1204964 -85472584 - L1ME3A LINE L1 -692 5470 5262 254 253 67 0 chr18 1204991 1205066 -85472482 + L2 LINE L2 3234 3313 0 2337 115 0 6 chr18 1205918 1206231 -85471317 + AluSx SINE Alu 1 311 -1 369 252 67 89 chr18 1206430 1206637 -85470911 - MIR SINE MIR -46 216 16 1650 174 30 7 chr18 1207525 1207823 -85469725 + AluJo SINE Alu 5 309 -3 1967 128 30 24 chr18 1208343 1208640 -85468908 + AluSx SINE Alu 1 299 -13 2224 135 47 39 chr18 1208643 1209027 -85468521 + MSTC LTR MaLR 42 428 0 206 263 0 18 chr18 1209172 1209229 -85468319 + L2 LINE L2 2595 2650 -664 2297 97 3 3 chr18 1209378 1209678 -85467870 + AluSq SINE Alu 1 300 -13 288 350 133 44 chr18 1209717 1210034 -85467514 + L2 LINE L2 2913 3257 -15 432 282 83 17 chr18 1210053 1210234 -85467314 + MIR SINE MIR 26 218 -44 23 0 0 0 chr18 1210959 1210982 -85466566 + AT_rich Low_complexity Low_complexity 1 23 0 1801 137 49 0 chr18 1211110 1211373 -85466175 - AluSx SINE Alu -36 276 1 21 0 0 0 chr18 1211470 1211491 -85466057 + AT_rich Low_complexity Low_complexity 1 21 0 705 159 16 8 chr18 1211503 1211629 -85465919 + FLAM_A SINE Alu 10 136 -6 198 0 0 0 chr18 1211782 1211804 -85465744 + (CA)n Simple_repeat Simple_repeat 2 23 0 2201 118 10 0 chr18 1212001 1212305 -85465243 - AluSq SINE Alu -6 307 1 22 0 0 0 chr18 1212622 1212644 -85464904 + AT_rich Low_complexity Low_complexity 1 22 0 588 236 13 92 chr18 1212650 1212849 -85464699 - MIR SINE MIR -47 215 35 1925 199 56 54 chr18 1212849 1213351 -85464197 - MLT1D LTR MaLR -2 503 1 588 236 13 92 chr18 1213351 1213380 -85464168 - MIR SINE MIR -227 35 5 1341 90 0 21 chr18 1213470 1213659 -85463889 - MER30B DNA MER1_type -5 185 1 945 141 19 0 chr18 1213957 1214113 -85463435 + MSTD LTR MaLR 1 159 -237 974 176 35 15 chr18 1214126 1214325 -85463223 + AluJo SINE Alu 79 281 -31 1072 181 48 29 chr18 1214329 1214539 -85463009 + MSTD LTR MaLR 181 394 -2 375 23 0 0 chr18 1214885 1214929 -85462619 + (CA)n Simple_repeat Simple_repeat 1 44 0 261 250 17 0 chr18 1214930 1214990 -85462558 - MER82 DNA MER2_type -1 652 592 608 226 136 6 chr18 1215228 1215405 -85462143 - MER82 DNA MER2_type -452 201 2 279 0 0 0 chr18 1215472 1215503 -85462045 + (T)n Simple_repeat Simple_repeat 1 31 0 180 0 0 0 chr18 1215531 1215551 -85461997 + (G)n Simple_repeat Simple_repeat 1 20 0 36 0 0 0 chr18 1215551 1215587 -85461961 + GC_rich Low_complexity Low_complexity 1 36 0 2514 119 67 7 chr18 1217548 1217951 -85459597 - MSTA LTR MaLR 0 428 2 213 342 25 17 chr18 1217988 1218108 -85459440 - MIR SINE MIR -126 136 16 180 186 29 114 chr18 1218626 1218696 -85458852 - MIR SINE MIR -121 141 78 2149 131 0 7 chr18 1219393 1219691 -85457857 + AluSx SINE Alu 1 296 -16 992 179 6 12 chr18 1219692 1219865 -85457683 + AluJb SINE Alu 133 304 -8 21 57 0 0 chr18 1219886 1219921 -85457627 + AT_rich Low_complexity Low_complexity 1 35 0 288 346 0 19 chr18 1220732 1220839 -85456709 + L2 LINE L2 2976 3080 -192 2581 137 26 10 chr18 1220839 1221254 -85456294 + MSTA LTR MaLR 1 422 -6 1965 127 25 7 chr18 1221262 1221546 -85456002 + AluSx SINE Alu 9 297 -15 234 0 0 0 chr18 1222672 1222698 -85454850 + (A)n Simple_repeat Simple_repeat 1 26 0 2042 127 0 0 chr18 1222884 1223159 -85454389 + AluSx SINE Alu 1 275 -37 2338 72 13 16 chr18 1223160 1223466 -85454082 + AluY SINE Alu 1 305 -6 1960 80 7 25 chr18 1223486 1223762 -85453786 + L1P5 LINE L1 5396 5666 -485 2207 101 3 0 chr18 1223762 1224058 -85453490 + AluSx SINE Alu 1 297 -15 1070 118 19 6 chr18 1224058 1224219 -85453329 + AluSq SINE Alu 134 296 -17 23 33 0 0 chr18 1225002 1225032 -85452516 + AT_rich Low_complexity Low_complexity 1 30 0 2067 61 4 0 chr18 1225481 1225728 -85451820 - L1PA5 LINE L1 -8 6146 5899 2257 80 13 10 chr18 1226020 1226319 -85451229 - AluSx SINE Alu -11 301 2 2193 122 0 0 chr18 1226351 1226646 -85450902 + AluSx SINE Alu 1 295 -17 29 28 0 0 chr18 1227375 1227411 -85450137 + AT_rich Low_complexity Low_complexity 1 36 0 1889 135 7 30 chr18 1227565 1227862 -85449686 + AluSx SINE Alu 6 295 -17 1845 170 0 19 chr18 1228228 1228539 -85449009 + AluJo SINE Alu 6 310 -2 1952 142 16 3 chr18 1228701 1229010 -85448538 + AluSq SINE Alu 1 313 0 2200 113 0 0 chr18 1229017 1229301 -85448247 + AluSq SINE Alu 1 284 -29 22 0 0 0 chr18 1229618 1229640 -85447908 + AT_rich Low_complexity Low_complexity 1 22 0 230 243 184 10 chr18 1229855 1229891 -85447657 - L2 LINE L2 0 3313 3285 2238 110 16 3 chr18 1229891 1230199 -85447349 + AluSq SINE Alu 1 312 -1 230 243 184 10 chr18 1230199 1230265 -85447283 - L2 LINE L2 -28 3285 3193 659 274 17 6 chr18 1230272 1230447 -85447101 - MIR SINE MIR 0 262 86 841 123 128 68 chr18 1230477 1230696 -85446852 - MER33 DNA MER1_type 0 324 93 1315 115 0 0 chr18 1230699 1230873 -85446675 + AluSx SINE Alu 3 176 -136 566 45 0 0 chr18 1230873 1230939 -85446609 - MER33 DNA MER1_type -216 108 43 1139 169 0 0 chr18 1231079 1231257 -85446291 + AluSg/x SINE Alu 134 311 -1 25 0 0 0 chr18 1231283 1231308 -85446240 + AT_rich Low_complexity Low_complexity 1 25 0 787 200 86 0 chr18 1231311 1231451 -85446097 + FAM SINE Alu 1 152 -33 276 30 0 0 chr18 1231452 1231485 -85446063 + (TC)n Simple_repeat Simple_repeat 2 34 0 259 130 0 0 chr18 1231501 1231547 -85446001 + LTR66 LTR ERVL 394 439 -171 210 37 0 0 chr18 1231579 1231606 -85445942 + (CAG)n Simple_repeat Simple_repeat 2 28 0 827 125 0 62 chr18 1231609 1231753 -85445795 + FLAM_C SINE Alu 7 141 -2 2356 78 0 3 chr18 1231943 1232263 -85445285 - AluSc SINE Alu 0 319 1 1783 191 0 0 chr18 1232278 1232561 -85444987 - AluJo SINE Alu -29 283 1 825 230 91 59 chr18 1232662 1233001 -85444547 + L1MC4 LINE L1 6883 7232 -810 1694 241 44 0 chr18 1233015 1233421 -85444127 + L1MC4 LINE L1 7300 7723 -319 897 229 76 8 chr18 1233470 1233719 -85443829 - MLT1C LTR MaLR -10 457 192 1890 111 7 4 chr18 1233730 1234001 -85443547 - AluSc SINE Alu -1 308 37 362 203 152 0 chr18 1234001 1234080 -85443468 - MLT1C LTR MaLR -375 92 2 1251 238 16 23 chr18 1234080 1234387 -85443161 + L1MC4 LINE L1 7736 8040 -2 3548 49 4 7 chr18 1234388 1234839 -85442709 + L1PA8 LINE L1 5702 6151 -21 297 0 0 0 chr18 1234839 1234872 -85442676 + (CA)n Simple_repeat Simple_repeat 2 34 0 481 309 116 13 chr18 1235122 1235355 -85442193 + MIR SINE MIR 6 262 0 1968 120 41 0 chr18 1235414 1235705 -85441843 + AluSg SINE Alu 1 303 -7 311 244 28 61 chr18 1236007 1236218 -85441330 + L1M4 LINE L1 5208 5411 -757 192 286 250 24 chr18 1236413 1236581 -85440967 - L3 LINE CR1 -5 1572 1367 215 329 169 27 chr18 1236605 1236824 -85440724 - L3 LINE CR1 -1293 284 35 23 33 0 0 chr18 1236852 1236882 -85440666 + AT_rich Low_complexity Low_complexity 1 30 0 1004 110 117 0 chr18 1236915 1237060 -85440488 - U1 snRNA snRNA -1 164 3 234 342 0 0 chr18 1238250 1238329 -85439219 + MLT1I LTR MaLR 73 151 -258 2004 120 25 0 chr18 1238354 1238637 -85438911 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr18 1238637 1238658 -85438890 + AT_rich Low_complexity Low_complexity 1 21 0 1006 155 92 0 chr18 1238667 1238841 -85438707 + AluSg/x SINE Alu 121 310 0 407 209 113 26 chr18 1239188 1239303 -85438245 - L2 LINE L2 -1 3312 3188 1252 168 141 38 chr18 1239692 1239792 -85437756 + AluJb SINE Alu 1 89 -213 2399 89 0 10 chr18 1239792 1240105 -85437443 + AluSg SINE Alu 1 310 0 1252 168 141 38 chr18 1240105 1240266 -85437282 + AluJb SINE Alu 89 289 -13 814 157 85 20 chr18 1241045 1241198 -85436350 + FRAM SINE Alu 4 166 -10 1951 98 91 4 chr18 1241213 1241487 -85436061 + AluSp SINE Alu 2 299 -14 401 202 219 0 chr18 1241607 1241726 -85435822 + MIR SINE MIR 26 170 -92 851 140 7 28 chr18 1241726 1241869 -85435679 + FLAM_C SINE Alu 1 140 -3 1484 197 3 26 chr18 1241871 1242176 -85435372 + AluJb SINE Alu 1 298 -14 2358 92 0 7 chr18 1243251 1243556 -85433992 + AluSx SINE Alu 1 303 -9 2169 117 0 3 chr18 1243556 1243864 -85433684 + AluSx SINE Alu 1 307 -5 1686 165 67 9 chr18 1244023 1244338 -85433210 - Tigger3(Golem) DNA MER2_type 0 3029 2697 323 325 18 61 chr18 1244419 1244582 -85432966 - MIR3 SINE MIR -23 185 30 1655 171 19 50 chr18 1245919 1246061 -85431487 + AluJb SINE Alu 1 146 -166 1658 98 9 0 chr18 1246061 1246275 -85431273 + AluSg/x SINE Alu 85 300 -12 1655 171 19 50 chr18 1246275 1246454 -85431094 + AluJb SINE Alu 146 312 0 2019 123 7 3 chr18 1248234 1248526 -85429022 - AluSx SINE Alu -19 293 1 764 155 9 0 chr18 1252223 1252339 -85425209 + AluJb SINE Alu 2 118 -194 26 0 0 0 chr18 1252344 1252370 -85425178 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr18 1252644 1252669 -85424879 + AT_rich Low_complexity Low_complexity 1 25 0 2084 107 3 28 chr18 1253541 1253864 -85423684 + AluSx SINE Alu 1 316 0 305 236 146 0 chr18 1254675 1254798 -85422750 + LTR67 LTR ERVL 411 551 -6 275 186 93 106 chr18 1255042 1255203 -85422345 - MER117 DNA MER1_type -38 159 1 2251 104 3 3 chr18 1255756 1256063 -85421485 + AluSx SINE Alu 1 307 -5 419 242 201 0 chr18 1256295 1256444 -85421104 - MIR SINE MIR -14 248 70 2327 84 0 13 chr18 1257106 1257404 -85420144 - AluY SINE Alu -17 294 1 2239 97 7 0 chr18 1257557 1257857 -85419691 - AluSp SINE Alu -10 303 2 2110 117 0 4 chr18 1257887 1258168 -85419380 + AluSg SINE Alu 1 280 -30 892 133 0 0 chr18 1258293 1258428 -85419120 + AluJb SINE Alu 1 135 -177 2135 125 0 0 chr18 1258429 1258718 -85418830 + AluSx SINE Alu 8 296 -16 868 134 92 0 chr18 1259700 1259842 -85417706 + L1MB7 LINE L1 6012 6166 -18 256 296 0 83 chr18 1259852 1259960 -85417588 + MIR SINE MIR 54 152 -56 755 248 135 9 chr18 1259963 1260193 -85417355 - MER112 DNA MER1_type -1 259 1 583 289 51 25 chr18 1260296 1260493 -85417055 - MIR SINE MIR -20 242 41 225 59 0 0 chr18 1260495 1260529 -85417019 + L1ME3 LINE L1 6129 6162 0 2480 90 0 0 chr18 1260657 1260967 -85416581 + AluSx SINE Alu 1 310 -2 231 36 0 0 chr18 1261120 1261148 -85416400 + (A)n Simple_repeat Simple_repeat 1 28 0 2083 88 12 73 chr18 1261357 1261687 -85415861 + AluSx SINE Alu 1 310 -2 2196 107 7 0 chr18 1261994 1262285 -85415263 + AluSx SINE Alu 2 294 -18 185 221 116 70 chr18 1262364 1262450 -85415098 - MIR SINE MIR -12 250 161 1546 164 23 59 chr18 1262762 1263067 -85414481 + AluJo SINE Alu 1 294 -18 21 36 0 0 chr18 1263808 1263836 -85413712 + AT_rich Low_complexity Low_complexity 1 28 0 2063 136 7 0 chr18 1264015 1264309 -85413239 + AluSx SINE Alu 1 296 -16 289 294 28 92 chr18 1265126 1265235 -85412313 + L2 LINE L2 3158 3259 -13 189 0 0 0 chr18 1265235 1265256 -85412292 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 185 373 0 0 chr18 1265256 1265323 -85412225 - MIR SINE MIR -90 118 52 2372 90 0 0 chr18 1265334 1265623 -85411925 - AluSg SINE Alu -21 289 1 822 194 41 25 chr18 1265731 1265927 -85411621 - MLT2B1 LTR ERVL -14 506 308 722 162 36 0 chr18 1265969 1266136 -85411412 + CT-rich Low_complexity Low_complexity 4 176 0 212 0 36 0 chr18 1266302 1266330 -85411218 + (TA)n Simple_repeat Simple_repeat 2 30 0 1928 119 3 20 chr18 1266330 1266632 -85410916 - AluSp SINE Alu -16 297 1 347 229 10 52 chr18 1266956 1267052 -85410496 - MIR SINE MIR -64 198 107 1457 163 105 0 chr18 1267101 1267358 -85410190 + AluJb SINE Alu 1 284 -28 2198 104 0 0 chr18 1268587 1268888 -85408660 - AluSg SINE Alu 0 301 1 2302 89 0 0 chr18 1268890 1269193 -85408355 + MER4E LTR ERV1 464 766 0 1391 162 11 38 chr18 1269305 1269570 -85407978 - MER44D DNA MER2_type 0 605 293 1104 195 23 23 chr18 1269968 1270183 -85407365 - MER44D DNA MER2_type -404 301 87 2315 101 0 7 chr18 1270183 1270490 -85407058 - AluSx SINE Alu -7 305 1 310 200 0 0 chr18 1270490 1270550 -85406998 + L1MD3 LINE L1 5894 5953 -2042 414 295 113 30 chr18 1270604 1270946 -85406602 - L2 LINE L2 -249 3023 2068 4902 146 24 39 chr18 1270966 1271006 -85406542 - MER49 LTR ERV1 -2 921 882 1802 151 26 22 chr18 1271006 1271317 -85406231 + AluJo SINE Alu 1 312 0 4902 146 24 39 chr18 1271317 1272143 -85405405 - MER49 LTR ERV1 -41 882 78 2182 106 7 0 chr18 1272143 1272435 -85405113 + AluSq SINE Alu 6 299 -14 4902 146 24 39 chr18 1272435 1272479 -85405069 - MER49 LTR ERV1 -845 78 35 348 139 97 0 chr18 1272480 1272552 -85404996 - L1MB2 LINE L1 -213 5958 5880 1655 177 38 0 chr18 1272567 1272855 -85404693 - AluJb SINE Alu -13 299 1 208 279 0 0 chr18 1272855 1272898 -85404650 + MER5B DNA MER1_type 136 178 0 1389 36 0 12 chr18 1272901 1273067 -85404481 + L1PA2 LINE L1 5992 6155 0 1972 131 31 7 chr18 1273082 1273372 -85404176 + AluSx SINE Alu 1 297 -15 241 297 0 14 chr18 1273373 1273447 -85404101 - MER5B DNA MER1_type -32 146 74 193 316 45 45 chr18 1273557 1273690 -85403858 - L2 LINE L2 -1327 1987 1855 2009 143 10 0 chr18 1273838 1274145 -85403403 - AluSq SINE Alu -3 310 1 4587 17 2 22 chr18 1274163 1274542 -85403006 - L1HS LINE L1 -1 6154 5788 2868 7 0 0 chr18 1274542 1274849 -85402699 - AluYb8 SINE Alu -11 307 1 4587 17 2 22 chr18 1274849 1275012 -85402536 - L1HS LINE L1 -367 5788 5623 832 11 0 0 chr18 1275010 1275101 -85402447 + L1P1 LINE L1 5521 5611 -544 * 426 323 31 12 chr18 1275148 1275347 -85402201 + MIR SINE MIR 6 245 -17 1978 121 39 26 chr18 1275855 1276162 -85401386 - AluSx SINE Alu -1 311 1 2327 101 72 26 chr18 1276418 1276766 -85400782 - THE1B LTR MaLR 0 364 1 252 314 51 8 chr18 1276773 1276891 -85400657 + MIR3 SINE MIR 57 179 -29 1091 188 4 60 chr18 1277888 1278122 -85399426 + AluJo SINE Alu 1 221 -91 536 198 0 0 chr18 1278124 1278210 -85399338 - AluJ/FLAM SINE Alu -225 87 2 578 294 87 9 chr18 1278357 1278588 -85398960 - MIR SINE MIR -12 250 2 1560 181 41 117 chr18 1278957 1279040 -85398508 + LTR2 LTR ERV1 41 129 -320 261 0 0 0 chr18 1279040 1279069 -85398479 + (TAA)n Simple_repeat Simple_repeat 2 30 0 1560 181 41 117 chr18 1279069 1279428 -85398120 + LTR2 LTR ERV1 129 449 0 502 271 42 42 chr18 1279428 1279620 -85397928 + L2 LINE L2 2875 3066 -247 387 228 25 0 chr18 1279755 1279834 -85397714 + MER91A DNA MER1_type 15 95 -101 296 297 22 0 chr18 1279904 1279995 -85397553 + L2 LINE L2 3179 3271 -1 2424 74 7 0 chr18 1280022 1280320 -85397228 - AluSp SINE Alu -13 300 1 2139 129 0 0 chr18 1280341 1280650 -85396898 + AluSc SINE Alu 1 309 0 495 69 0 0 chr18 1280720 1280792 -85396756 + AluSp/q SINE Alu 240 311 -2 230 203 105 84 chr18 1281501 1281644 -85395904 - L1ME4a LINE L1 -2 6119 5974 523 258 82 94 chr18 1281773 1282188 -85395360 - L1ME4a LINE L1 -188 5933 5524 506 277 200 50 chr18 1282425 1283050 -85394498 - L1ME4a LINE L1 -749 5397 4679 522 289 35 40 chr18 1283255 1283483 -85394065 + MIR SINE MIR 30 256 -6 26 30 0 0 chr18 1283676 1283709 -85393839 + AT_rich Low_complexity Low_complexity 1 33 0 234 71 0 0 chr18 1283715 1283743 -85393805 - Alu SINE Alu -211 91 64 2668 32 0 3 chr18 1283755 1284065 -85393483 - AluY SINE Alu -2 309 1 32 0 0 0 chr18 1284107 1284139 -85393409 + AT_rich Low_complexity Low_complexity 1 32 0 2366 88 0 0 chr18 1284490 1284786 -85392762 + AluSc SINE Alu 1 296 -13 557 258 70 47 chr18 1284808 1285021 -85392527 + MIR SINE MIR 2 219 -43 1391 180 78 17 chr18 1285253 1285359 -85392189 + AluJo SINE Alu 1 99 -213 195 42 0 0 chr18 1285359 1285383 -85392165 + (TAA)n Simple_repeat Simple_repeat 1 24 0 1391 180 78 17 chr18 1285383 1285570 -85391978 + AluJo SINE Alu 99 312 0 2265 110 0 0 chr18 1286597 1286897 -85390651 + AluSg SINE Alu 2 301 -9 1459 132 64 41 chr18 1288282 1288548 -85389000 - THE1B LTR MaLR -92 272 1 1698 174 7 14 chr18 1288575 1288868 -85388680 - AluJo SINE Alu -21 291 1 581 266 30 49 chr18 1288919 1289122 -85388426 - MER21B LTR ERV1 -165 698 500 1450 96 25 0 chr18 1289193 1289390 -85388158 - AluSg/x SINE Alu -24 286 85 234 353 121 0 chr18 1289496 1289612 -85387936 - MIR SINE MIR -21 241 112 2202 101 3 3 chr18 1291125 1291422 -85386126 - AluSq SINE Alu -16 297 1 223 253 131 71 chr18 1291423 1291522 -85386026 + L2 LINE L2 3158 3262 -10 834 285 30 17 chr18 1291682 1291917 -85385631 + MIR SINE MIR 15 252 -10 22 56 0 0 chr18 1292189 1292225 -85385323 + AT_rich Low_complexity Low_complexity 1 36 0 254 258 199 66 chr18 1292525 1292781 -85384767 + MLT1K LTR MaLR 200 489 -99 217 298 0 0 chr18 1292828 1292885 -85384663 - MIR SINE MIR -5 257 201 293 264 161 0 chr18 1293969 1294056 -85383492 - MIR SINE MIR -113 149 49 1018 211 4 29 chr18 1294124 1294366 -85383182 + AluJo SINE Alu 64 299 -13 343 265 25 6 chr18 1295627 1295789 -85381759 + (TA)n Simple_repeat Simple_repeat 2 166 0 26 0 0 0 chr18 1295848 1295874 -85381674 + AT_rich Low_complexity Low_complexity 1 26 0 335 141 0 62 chr18 1296089 1296153 -85381395 - MER103 DNA DNA -105 61 2 366 74 0 0 chr18 1297207 1297261 -85380287 + (CA)n Simple_repeat Simple_repeat 1 54 0 2522 82 0 0 chr18 1297319 1297624 -85379924 + AluSx SINE Alu 1 305 -7 501 367 33 12 chr18 1298497 1298742 -85378806 + MIR SINE MIR 8 257 -5 581 225 78 65 chr18 1299402 1299633 -85377915 - MER112 DNA MER1_type -9 251 18 347 303 141 7 chr18 1299873 1300015 -85377533 + MIR SINE MIR 40 200 -62 1610 202 6 19 chr18 1300045 1300357 -85377191 + AluJo SINE Alu 5 312 0 200 175 123 18 chr18 1300366 1300423 -85377125 + MIR SINE MIR 179 241 -21 22 0 0 0 chr18 1300886 1300908 -85376640 + AT_rich Low_complexity Low_complexity 1 22 0 7927 61 1 0 chr18 1301157 1302167 -85375381 - L1P LINE L1 -4232 1914 904 5576 173 11 13 chr18 1302277 1303363 -85374185 + L1 LINE L1 4320 5403 -743 630 236 204 39 chr18 1303699 1303979 -85373569 - MLT1I LTR MaLR -2 407 82 234 287 40 69 chr18 1304281 1304382 -85373166 + MIR SINE MIR 20 117 -91 205 323 47 31 chr18 1304615 1304742 -85372806 - L3 LINE CR1 -384 1193 1065 343 185 0 15 chr18 1305862 1305927 -85371621 - MER20 DNA MER1_type -24 195 132 244 208 0 21 chr18 1306576 1306624 -85370924 + MER20 DNA MER1_type 1 47 -172 2375 83 0 3 chr18 1306666 1306966 -85370582 - AluSx SINE Alu -13 299 1 2244 109 0 3 chr18 1308314 1308618 -85368930 - AluSx SINE Alu -9 303 1 27 0 0 0 chr18 1308618 1308645 -85368903 + AT_rich Low_complexity Low_complexity 1 27 0 30202 132 41 22 chr18 1308645 1314677 -85362871 - L1PA8 LINE L1 -13 6159 11 332 243 0 87 chr18 1314657 1314842 -85362706 - L1M4 LINE L1 -2886 3260 3092 * 201 39 0 0 chr18 1314921 1314947 -85362601 + (CA)n Simple_repeat Simple_repeat 2 27 0 2542 193 86 11 chr18 1315044 1315614 -85361934 + MER76 LTR ERV 2 614 -74 3976 139 12 47 chr18 1315623 1316307 -85361241 - L1PA16 LINE L1 -1 6165 5506 330 221 93 0 chr18 1316326 1316412 -85361136 + MER76 LTR ERV 595 688 0 200 100 25 0 chr18 1317755 1317795 -85359753 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 907 216 28 18 chr18 1317827 1318045 -85359503 - L1ME3 LINE L1 -102 6060 5841 29 0 0 0 chr18 1318059 1318088 -85359460 + AT_rich Low_complexity Low_complexity 1 29 0 11491 166 31 5 chr18 1318233 1323009 -85354539 + L1PB1 LINE L1 6 5202 -1665 207 0 0 0 chr18 1323009 1323032 -85354516 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 11491 166 31 5 chr18 1323032 1324372 -85353176 + L1PB1 LINE L1 5202 6506 -361 186 133 0 0 chr18 1324373 1324403 -85353145 + (TA)n Simple_repeat Simple_repeat 1 30 0 232 186 14 14 chr18 1324437 1324507 -85353041 + (TA)n Simple_repeat Simple_repeat 2 71 0 2585 128 8 0 chr18 1324507 1324874 -85352674 + L1PB1 LINE L1 6497 6866 -1 501 48 0 0 chr18 1325217 1325280 -85352268 - L1P LINE L1 -1045 5101 5039 * 6915 97 13 4 chr18 1325278 1326267 -85351281 - L1P LINE L1 -2309 3837 2837 281 26 26 0 chr18 1326267 1326305 -85351243 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 6915 97 13 4 chr18 1326305 1326317 -85351231 - L1P LINE L1 -3309 2837 2827 * 43722 33 23 2 chr18 1326313 1332332 -85345216 - L1PA3 LINE L1 0 6155 7 13706 128 12 143 chr18 1332333 1333329 -85344219 - L1P LINE L1 -3293 2853 1728 3480 43 0 0 chr18 1333329 1333727 -85343821 + L1PA5 LINE L1 5757 6154 0 13706 128 12 143 chr18 1333727 1336002 -85341546 - L1P LINE L1 -4418 1728 12 255 336 109 0 chr18 1336412 1336522 -85341026 - L2 LINE L2 -10 3303 3182 457 196 21 10 chr18 1336743 1336840 -85340708 + MIR SINE MIR 59 156 -106 1992 319 147 39 chr18 1336906 1337655 -85339893 + L2 LINE L2 383 1049 -2223 1739 173 0 7 chr18 1337655 1337944 -85339604 - AluJo SINE Alu -25 287 1 1992 319 147 39 chr18 1337944 1339777 -85337771 + L2 LINE L2 1049 3260 -12 204 97 0 0 chr18 1339841 1339872 -85337676 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 287 277 127 42 chr18 1340194 1340360 -85337188 - MIR SINE MIR -6 256 77 2143 131 38 17 chr18 1341343 1341665 -85335883 - MER41E LTR ERV1 0 512 181 2397 132 132 5 chr18 1341665 1342045 -85335503 - MSTA LTR MaLR 0 428 1 2143 131 38 17 chr18 1342045 1342066 -85335482 - MER41E LTR ERV1 -331 181 162 2051 135 0 3 chr18 1342077 1342389 -85335159 - L1PA16 LINE L1 -261 5905 5595 1013 174 16 21 chr18 1342390 1342580 -85334968 - MER41E LTR ERV1 -323 189 1 519 56 0 0 chr18 1343354 1343425 -85334123 + (TA)n Simple_repeat Simple_repeat 1 71 0 2209 108 3 0 chr18 1343425 1343712 -85333836 - AluSg SINE Alu -22 288 1 1202 35 49 0 chr18 1343834 1343977 -85333571 + L1PA5 LINE L1 6004 6153 -1 496 306 32 13 chr18 1344163 1344320 -85333228 - MIR SINE MIR -95 167 8 331 296 41 0 chr18 1344309 1344407 -85333141 + L2 LINE L2 3146 3247 -25 * 817 129 0 24 chr18 1344595 1344719 -85332829 - AluJo SINE Alu -178 134 14 2552 169 35 22 chr18 1345641 1346102 -85331446 - MLT1C LTR MaLR 0 467 1 199 318 0 15 chr18 1346144 1346210 -85331338 - L2 LINE L2 -15 3298 3234 253 324 80 45 chr18 1346755 1346931 -85330617 - L3 LINE CR1 -47 1530 1349 4163 166 33 48 chr18 1346998 1347838 -85329710 - L1MB7 LINE L1 -29 6155 5328 329 236 14 14 chr18 1347859 1347931 -85329617 - L2 LINE L2 -1 3271 3200 465 219 67 0 chr18 1348455 1348560 -85328988 - MLT1L LTR MaLR -152 463 352 337 287 155 55 chr18 1349405 1349668 -85327880 - L2 LINE L2 -457 2857 2557 2650 39 0 13 chr18 1349668 1349978 -85327570 + AluY SINE Alu 1 306 -5 337 287 155 55 chr18 1349978 1350024 -85327524 - L2 LINE L2 -757 2557 2517 330 359 86 20 chr18 1350123 1350368 -85327180 - L3 LINE CR1 -299 1278 1018 1185 254 121 34 chr18 1350525 1350938 -85326610 - MLT1L LTR MaLR -40 575 127 247 271 75 53 chr18 1351105 1351129 -85326419 - L3 LINE CR1 -998 579 557 192 97 0 0 chr18 1351129 1351160 -85326388 + (TCTA)n Simple_repeat Simple_repeat 3 33 0 247 271 75 53 chr18 1351160 1351268 -85326280 - L3 LINE CR1 -1020 557 444 1657 126 95 18 chr18 1351944 1352229 -85325319 + AluJb SINE Alu 1 307 -5 231 211 10 135 chr18 1352464 1352568 -85324980 + L1ME3A LINE L1 5968 6058 -112 1584 111 39 79 chr18 1352583 1352725 -85324823 + L1PA13 LINE L1 5888 6015 -148 2356 106 0 0 chr18 1352725 1353037 -85324511 + AluSx SINE Alu 1 312 0 1584 111 39 79 chr18 1353037 1353174 -85324374 + L1PA13 LINE L1 6015 6156 -7 28 29 0 0 chr18 1353464 1353499 -85324049 + AT_rich Low_complexity Low_complexity 1 35 0 195 306 198 25 chr18 1353535 1353656 -85323892 - L2 LINE L2 -4 3268 3127 1015 295 74 62 chr18 1355173 1355923 -85321625 - L2 LINE L2 -1 3271 2523 2105 146 0 0 chr18 1355923 1356225 -85321323 + AluSx SINE Alu 1 302 -10 1015 295 74 62 chr18 1356225 1356505 -85321043 - L2 LINE L2 -749 2523 2248 192 269 164 77 chr18 1356758 1356862 -85320686 - MIR SINE MIR -62 146 34 1470 262 42 14 chr18 1357898 1358330 -85319218 - LTR16A LTR ERVL -6 444 1 2571 134 38 35 chr18 1358347 1358587 -85318961 - MSTB LTR MaLR 0 426 183 2470 77 0 0 chr18 1358587 1358886 -85318662 - AluY SINE Alu -12 299 1 2571 134 38 35 chr18 1358886 1359070 -85318478 - MSTB LTR MaLR -243 183 1 3578 332 44 30 chr18 1359179 1361075 -85316473 - HERV16 LTR ERVL -381 5383 3145 2649 321 49 28 chr18 1361114 1362628 -85314920 - HERV16 LTR ERVL -1913 3083 1957 437 232 92 49 chr18 1362629 1362793 -85314755 - LTR16A LTR ERVL -264 186 16 555 187 172 0 chr18 1362874 1363008 -85314540 + MER69A DNA AcHobo 21 177 0 214 314 43 0 chr18 1363053 1363123 -85314425 - MIR SINE MIR -6 256 184 474 351 46 43 chr18 1363177 1363502 -85314046 + L2 LINE L2 2937 3262 -10 434 230 51 88 chr18 1363975 1364192 -85313356 - L1ME LINE L1 -316 5805 5597 294 220 99 103 chr18 1364406 1364638 -85312910 + MLT1J1 LTR MaLR 201 431 -15 230 244 117 56 chr18 1364682 1364862 -85312686 - L1P1 LINE L1 -611 5544 5354 1349 173 31 4 chr18 1368044 1368270 -85309278 + AluJb SINE Alu 64 295 -17 345 280 47 19 chr18 1368793 1368944 -85308604 - MLT1J LTR MaLR -237 213 64 492 306 65 12 chr18 1369596 1369766 -85307782 + MER5A DNA MER1_type 1 179 -10 339 276 92 0 chr18 1369820 1369918 -85307630 + MIR3 SINE MIR 49 155 -53 260 227 27 7 chr18 1370173 1370323 -85307225 + (TCTCTG)n Simple_repeat Simple_repeat 4 156 0 21 0 0 0 chr18 1370478 1370499 -85307049 + AT_rich Low_complexity Low_complexity 1 21 0 311 213 12 134 chr18 1370948 1371112 -85306436 - L1MC4 LINE L1 -188 7854 7711 705 168 23 15 chr18 1375236 1375367 -85302181 - FLAM_C SINE Alu -1 132 1 387 331 120 6 chr18 1375710 1375885 -85301663 + L2 LINE L2 2852 3046 -226 240 286 253 0 chr18 1376151 1376242 -85301306 - L3 LINE CR1 -173 1404 1291 198 188 0 42 chr18 1376337 1376385 -85301163 + MIR SINE MIR 111 156 -106 226 387 67 8 chr18 1376397 1376516 -85301032 - L2 LINE L2 -5 3267 3142 764 219 64 27 chr18 1377028 1377578 -85299970 + L1ME3A LINE L1 5541 6170 0 1343 293 71 57 chr18 1378321 1378993 -85298555 + MER115 DNA AcHobo 12 693 0 232 302 256 0 chr18 1379388 1379474 -85298074 - L2 LINE L2 -25 3247 3140 251 281 12 0 chr18 1380540 1380622 -85296926 - L1ME4a LINE L1 -201 5920 5838 254 250 95 43 chr18 1380691 1380807 -85296741 - L1ME4a LINE L1 -390 5731 5610 1334 89 17 0 chr18 1380813 1380993 -85296555 + L1PA15 LINE L1 5905 6087 -78 1220 98 6 12 chr18 1381099 1381263 -85296285 + AluSp SINE Alu 57 219 -94 323 335 74 20 chr18 1381264 1381467 -85296081 - L1ME4a LINE L1 -749 5493 5280 3121 212 45 14 chr18 1381505 1382268 -85295280 - L1ME2 LINE L1 -9 6155 5370 2069 237 124 41 chr18 1382546 1383594 -85293954 - L1ME3A LINE L1 0 6170 5030 749 286 47 22 chr18 1383638 1384044 -85293504 - L1ME3A LINE L1 -2499 3647 3232 7072 56 44 1 chr18 1384060 1385556 -85291992 - L1PA6 LINE L1 -5 6149 4622 185 390 65 13 chr18 1385667 1385744 -85291804 - L3b LINE CR1 -19 1564 1484 * 516 220 121 14 chr18 1385705 1385846 -85291702 - MER5B DNA MER1_type -22 156 1 4283 45 9 6 chr18 1386094 1386633 -85290915 - L1PA8 LINE L1 -4 6168 5628 271 312 97 19 chr18 1386924 1387078 -85290470 + L3 LINE CR1 792 957 -620 370 253 96 27 chr18 1387266 1387412 -85290136 - MIR SINE MIR 0 262 107 359 351 53 16 chr18 1387403 1387591 -85289957 + MIR SINE MIR 18 212 -50 * 5728 121 25 31 chr18 1388313 1389315 -85288233 - L1MA6 LINE L1 -51 6249 5254 25 31 0 0 chr18 1389502 1389534 -85288014 + AT_rich Low_complexity Low_complexity 1 32 0 255 298 12 12 chr18 1389975 1390059 -85287489 - MLT1L LTR MaLR -531 84 1 26 30 0 0 chr18 1390833 1390866 -85286682 + AT_rich Low_complexity Low_complexity 1 33 0 225 265 0 0 chr18 1392256 1392305 -85285243 - MIR3 SINE MIR -9 199 151 2018 188 105 9 chr18 1393124 1393699 -85283849 - MLT1E2 LTR MaLR -13 613 1 739 116 23 16 chr18 1394160 1394289 -85283259 - L1MA4A LINE L1 -5 6298 6169 201 39 0 0 chr18 1394411 1394437 -85283111 + (TG)n Simple_repeat Simple_repeat 1 26 0 13895 223 44 22 chr18 1394437 1395590 -85281958 - L1MA9 LINE L1 -161 6039 4913 2301 102 0 6 chr18 1395590 1395903 -85281645 - AluY SINE Alu 0 311 1 13895 223 44 22 chr18 1395903 1396604 -85280944 - L1MA9 LINE L1 -1287 4913 4229 414 0 0 0 chr18 1396604 1396650 -85280898 + (TTTA)n Simple_repeat Simple_repeat 4 49 0 13895 223 44 22 chr18 1396650 1398026 -85279522 - L1MA9 LINE L1 -1971 4229 2885 2692 96 3 5 chr18 1398026 1398402 -85279146 - THE1C LTR MaLR 0 375 1 13895 223 44 22 chr18 1398402 1399275 -85278273 - L1MA9 LINE L1 -3315 2885 2033 600 53 0 0 chr18 1399275 1399351 -85278197 + (TTCC)n Simple_repeat Simple_repeat 2 77 0 1811 171 0 0 chr18 1399351 1399632 -85277916 - AluJb SINE Alu -30 282 2 13895 223 44 22 chr18 1399632 1399792 -85277756 - L1MA9 LINE L1 -4167 2033 1878 504 0 0 0 chr18 1399792 1399848 -85277700 + (TA)n Simple_repeat Simple_repeat 2 57 0 2200 108 0 3 chr18 1399848 1400136 -85277412 - AluSq SINE Alu -26 287 1 13895 223 44 22 chr18 1400136 1400341 -85277207 - L1MA9 LINE L1 -4322 1878 1679 2999 72 21 77 chr18 1400341 1400811 -85276737 + MLT2A1 LTR ERVL 1 444 0 13895 223 44 22 chr18 1400811 1403144 -85274404 - L1MA9 LINE L1 -4521 1679 11 513 232 61 61 chr18 1404581 1404779 -85272769 + MER63A DNA MER1_type 5 202 -8 3148 98 30 0 chr18 1405533 1405973 -85271575 - MLT2A2 LTR ERVL 0 453 1 4411 251 59 16 chr18 1406766 1408807 -85268741 - L1MEc LINE L1 -2257 3958 1877 2646 223 131 52 chr18 1408810 1409939 -85267609 - L1MEc LINE L1 -4842 1554 337 360 261 89 57 chr18 1409989 1410146 -85267402 + L2 LINE L2 3144 3305 -8 21 0 0 0 chr18 1411164 1411185 -85266363 + AT_rich Low_complexity Low_complexity 1 21 0 2239 112 3 6 chr18 1411432 1411745 -85265803 + AluSx SINE Alu 1 312 0 25 31 0 0 chr18 1413589 1413621 -85263927 + AT_rich Low_complexity Low_complexity 1 32 0 180 274 0 20 chr18 1414250 1414301 -85263247 - MIR3 SINE MIR -14 194 145 27288 70 12 3 chr18 1415218 1419469 -85258079 - L1PA6 LINE L1 -239 5915 1631 21 0 0 0 chr18 1419609 1419630 -85257918 + AT_rich Low_complexity Low_complexity 1 21 0 307 225 72 105 chr18 1419763 1419972 -85257576 + L1MC4 LINE L1 6510 6711 -1331 574 186 106 9 chr18 1420091 1420204 -85257344 + FLAM_C SINE Alu 1 124 -9 1108 131 0 0 chr18 1421192 1421345 -85256203 - AluSg SINE Alu -23 287 135 219 36 0 0 chr18 1421645 1421673 -85255875 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 270 0 0 0 chr18 1421672 1421702 -85255846 + (GA)n Simple_repeat Simple_repeat 1 30 0 732 269 23 6 chr18 1422125 1422300 -85255248 + MER5B DNA MER1_type 1 178 0 939 112 0 0 chr18 1422712 1422837 -85254711 - AluSg SINE Alu -183 127 3 3316 139 7 2 chr18 1422838 1423378 -85254170 + L1PA15 LINE L1 5622 6164 -1 401 210 43 117 chr18 1425005 1425167 -85252381 - MIR SINE MIR -37 225 76 246 321 12 0 chr18 1425294 1425375 -85252173 - L2 LINE L2 0 3313 3232 242 346 82 70 chr18 1425449 1425778 -85251770 - L2 LINE L2 -1 3271 2939 238 241 0 0 chr18 1426881 1426891 -85250657 + (TATG)n Simple_repeat Simple_repeat 1 10 -44 2162 159 0 3 chr18 1426891 1427255 -85250293 - L1PB1 LINE L1 -8 6143 5781 238 241 0 0 chr18 1427255 1427298 -85250250 + (TATG)n Simple_repeat Simple_repeat 9 54 0 262 273 0 0 chr18 1427298 1427386 -85250162 + L1MC4 LINE L1 6615 6702 -1340 233 253 72 0 chr18 1427398 1427481 -85250067 + L1MC4 LINE L1 6615 6703 -1339 189 286 0 0 chr18 1427481 1427544 -85250004 + (TATATG)n Simple_repeat Simple_repeat 5 67 0 13808 205 42 6 chr18 1427544 1432539 -85245009 - L1P5 LINE L1 -360 6507 1332 3342 218 113 24 chr18 1432562 1433608 -85243940 - L1P5 LINE L1 -5706 1157 19 246 279 104 27 chr18 1433920 1434053 -85243495 + MIR SINE MIR 1 152 -56 2199 108 7 0 chr18 1435392 1435699 -85241849 - AluSq SINE Alu -4 309 1 342 258 106 61 chr18 1436317 1436515 -85241033 + MIR SINE MIR 2 208 -54 824 108 0 47 chr18 1437142 1437271 -85240277 - FLAM_C SINE Alu -10 123 1 319 325 90 18 chr18 1437337 1437503 -85240045 + MIR SINE MIR 3 180 -82 21 0 0 0 chr18 1437540 1437561 -85239987 + AT_rich Low_complexity Low_complexity 1 21 0 528 174 17 9 chr18 1437778 1437893 -85239655 + L1MA7 LINE L1 6170 6285 -6 843 212 80 12 chr18 1439131 1439390 -85238158 - LTR16C LTR ERVL 0 491 192 3875 142 49 3 chr18 1439668 1440366 -85237182 - L1MB3 LINE L1 -11 6172 5443 273 288 219 0 chr18 1440668 1440814 -85236734 + MIR SINE MIR 28 205 -57 253 326 21 56 chr18 1441125 1441269 -85236279 - L2 LINE L2 -188 3084 2946 261 345 53 29 chr18 1441392 1441563 -85235985 - L2 LINE L2 -529 2785 2611 3747 117 75 72 chr18 1441576 1442852 -85234696 + pTR5 LTR ERV1 742 2294 -144 313 274 0 68 chr18 1443147 1443264 -85234284 - L2 LINE L2 -1004 2310 2202 410 295 133 54 chr18 1443319 1443560 -85233988 + L2 LINE L2 3012 3271 -1 798 143 5 63 chr18 1444386 1444575 -85232973 - L1MD3 LINE L1 -939 7056 6879 30 59 0 0 chr18 1444607 1444658 -85232890 + AT_rich Low_complexity Low_complexity 1 51 0 4629 24 0 0 chr18 1444658 1445196 -85232352 - L1PA3 LINE L1 -4 6151 5614 228 31 0 0 chr18 1445196 1445228 -85232320 + L1P LINE L1 3672 3703 -2443 5521 118 16 7 chr18 1445261 1446113 -85231435 - L1PA16 LINE L1 -1 6165 5306 2380 25 34 0 chr18 1446111 1446445 -85231103 - L1P3 LINE L1 -540 5614 5240 * 469 268 153 29 chr18 1449784 1449993 -85227555 - MIR SINE MIR 0 262 28 402 177 21 0 chr18 1450317 1450413 -85227135 + (CATCC)n Simple_repeat Simple_repeat 3 100 0 243 244 47 47 chr18 1450554 1450640 -85226908 - MIR3 SINE MIR -108 100 15 262 298 230 12 chr18 1451055 1451216 -85226332 + MIR SINE MIR 15 210 -52 302 294 56 77 chr18 1451909 1452052 -85225496 - MIR3 SINE MIR -24 184 45 205 333 0 16 chr18 1453138 1453201 -85224347 - L2 LINE L2 -43 3270 3209 302 134 58 17 chr18 1453219 1453391 -85224157 + (TA)n Simple_repeat Simple_repeat 2 180 0 325 227 156 28 chr18 1453391 1453532 -85224016 - L2 LINE L2 -134 3179 3021 255 270 79 79 chr18 1453726 1453878 -85223670 - MIR3 SINE MIR -36 172 21 652 323 56 16 chr18 1454781 1455032 -85222516 + MIR SINE MIR 2 262 0 663 235 39 15 chr18 1455150 1455354 -85222194 - L1MA9 LINE L1 -42 6270 6062 714 140 9 0 chr18 1455362 1455469 -85222079 - AluSq/x SINE Alu -205 108 1 194 81 27 0 chr18 1455485 1455522 -85222026 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 16834 149 66 13 chr18 1455522 1456468 -85221080 - L1PBa LINE L1 -1991 4871 3977 1695 177 10 13 chr18 1456468 1456779 -85220769 - AluSx SINE Alu -1 311 2 16834 149 66 13 chr18 1456779 1459480 -85218068 - L1PBa LINE L1 -2885 3977 1421 3892 81 182 2 chr18 1459480 1460063 -85217485 - LTR12 LTR ERV1 0 688 1 16834 149 66 13 chr18 1460063 1460526 -85217022 - L1PBa LINE L1 -5441 1421 984 2374 15 0 8 chr18 1460526 1460793 -85216755 - AluY SINE Alu -7 304 40 16834 149 66 13 chr18 1460793 1461305 -85216243 - L1PBa LINE L1 -5878 984 2 22 35 0 0 chr18 1461469 1461498 -85216050 + AT_rich Low_complexity Low_complexity 1 29 0 7481 185 19 20 chr18 1461498 1462962 -85214586 - L1PA16 LINE L1 -9 6157 4708 2083 146 0 0 chr18 1462962 1463270 -85214278 - AluSx SINE Alu -4 308 1 7481 185 19 20 chr18 1463270 1464387 -85213161 - L1PA16 LINE L1 -1458 4708 3591 446 260 33 37 chr18 1464608 1464851 -85212697 - MER41B LTR ERV1 -205 430 55 4283 230 18 9 chr18 1464960 1466227 -85211321 - L1P LINE L1 -2553 3593 2257 414 0 0 0 chr18 1466937 1466983 -85210565 + (TTA)n Simple_repeat Simple_repeat 3 48 0 5414 57 3 3 chr18 1466983 1467672 -85209876 - L1PA7 LINE L1 -18 6136 5448 1965 44 0 0 chr18 1467672 1467921 -85209627 + L1P LINE L1 5005 5253 -893 269 277 161 9 chr18 1469032 1469144 -85208404 + MIR SINE MIR 18 146 -62 567 315 33 0 chr18 1469182 1469363 -85208185 + MER20B DNA MER1_type 5 191 -592 309 297 119 64 chr18 1469578 1469635 -85207913 - MIR SINE MIR -6 256 204 2132 126 0 0 chr18 1469635 1469940 -85207608 - AluSx SINE Alu 0 305 1 309 297 119 64 chr18 1469940 1470117 -85207431 - MIR SINE MIR -58 204 8 347 339 138 43 chr18 1470210 1470537 -85207011 + L2 LINE L2 2907 3264 -8 490 286 74 64 chr18 1470843 1471046 -85206502 + MIR SINE MIR 1 205 -57 2734 231 65 51 chr18 1472816 1473170 -85204378 - L1M4c LINE L1 -4436 2702 2354 3480 180 36 6 chr18 1473170 1473885 -85203663 - L1MB7 LINE L1 -19 6165 5429 2734 231 65 51 chr18 1473885 1475102 -85202446 - L1M4c LINE L1 -4784 2354 938 343 314 102 71 chr18 1475107 1475429 -85202119 - L1M4c LINE L1 -6298 561 230 544 293 90 78 chr18 1475431 1475914 -85201634 - L1M4b LINE L1 -6360 499 11 342 308 115 0 chr18 1477222 1477352 -85200196 - MIR3 SINE MIR -43 165 21 621 196 0 0 chr18 1477355 1477462 -85200086 - FLAM_A SINE Alu -35 107 1 361 306 69 17 chr18 1478661 1478834 -85198714 - MIR SINE MIR -77 185 4 352 325 68 28 chr18 1478884 1479133 -85198415 + L2 LINE L2 1671 1929 -1385 1833 286 44 18 chr18 1479181 1479794 -85197754 - L1ME3 LINE L1 -58 6104 5476 254 213 13 13 chr18 1479792 1479867 -85197681 - L1ME3 LINE L1 -1756 4390 4316 * 3826 226 114 40 chr18 1479864 1481769 -85195779 - L1MB8 LINE L1 -2 6412 4169 1183 209 36 105 chr18 1481769 1482161 -85195387 - MLT1A1 LTR MaLR 0 365 1 3826 226 114 40 chr18 1482161 1483279 -85194269 - L1MB8 LINE L1 -2245 4169 3135 1435 250 83 49 chr18 1483288 1484267 -85193281 - L1MB8 LINE L1 -3321 3061 2035 801 251 69 108 chr18 1484366 1484590 -85192958 - L1MB8 LINE L1 -4560 1824 1593 648 139 0 0 chr18 1484590 1484705 -85192843 - L1MA4 LINE L1 -3 6297 6183 801 251 69 108 chr18 1484705 1484971 -85192577 - L1MB8 LINE L1 -4791 1593 1353 333 285 57 13 chr18 1484991 1485149 -85192399 - L1MCc LINE L1 -5090 1333 1169 228 339 16 25 chr18 1485617 1485738 -85191810 - L1MCc LINE L1 -6015 408 289 377 288 27 22 chr18 1485780 1485964 -85191584 - L1MCc LINE L1 -6220 203 19 207 257 0 43 chr18 1485988 1486058 -85191490 - MIR SINE MIR -73 189 123 458 122 0 0 chr18 1487033 1487115 -85190433 + L1PB1 LINE L1 6069 6150 -1 202 271 40 124 chr18 1487156 1487381 -85190167 + L2 LINE L2 2682 2887 -427 190 345 29 29 chr18 1487408 1487547 -85190001 + L2 LINE L2 1942 2080 -1234 * 363 200 0 53 chr18 1487544 1487639 -85189909 - L2 LINE L2 -957 2357 2268 218 236 28 14 chr18 1487698 1487770 -85189778 + CT-rich Low_complexity Low_complexity 4 76 0 6245 56 151 63 chr18 1487795 1488873 -85188675 - MER11A LTR ERVK 0 1266 1 181 319 14 14 chr18 1488876 1488948 -85188600 + L2 LINE L2 2225 2296 -1018 1979 84 0 7 chr18 1489004 1489323 -85188225 - L1PA4 LINE L1 0 6155 5884 4928 19 0 0 chr18 1489324 1489963 -85187585 - L1PA4 LINE L1 -328 5827 5189 335 223 11 11 chr18 1490947 1491041 -85186507 - L1M4 LINE L1 -390 5794 5701 579 280 28 129 chr18 1491218 1491614 -85185934 + L2 LINE L2 2913 3268 -4 9812 181 30 14 chr18 1491621 1493415 -85184133 + L1M1 LINE L1 12 1834 -5731 20828 165 39 39 chr18 1493439 1495365 -85182183 - L1MA2 LINE L1 0 7723 5799 1230 122 0 0 chr18 1495365 1495529 -85182019 - AluSg/x SINE Alu -12 298 135 20828 165 39 39 chr18 1495529 1500831 -85176717 - L1MA2 LINE L1 -1924 5799 317 2238 197 40 68 chr18 1500831 1501461 -85176087 - LTR9 LTR ERV1 0 612 1 20828 165 39 39 chr18 1501461 1501764 -85175784 - L1MA2 LINE L1 -7406 317 16 306 0 0 0 chr18 1501771 1501805 -85175743 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7031 53 0 0 chr18 1501805 1503004 -85174544 - L1PA6 LINE L1 -18 6136 4940 2186 104 0 0 chr18 1503833 1504135 -85173413 - AluSx SINE Alu 0 305 4 1706 177 114 38 chr18 1504572 1504968 -85172580 - MSTA LTR MaLR -2 426 1 412 271 88 25 chr18 1505889 1506093 -85171455 - MLT1H LTR MaLR -2 547 334 380 347 34 6 chr18 1507932 1508108 -85169440 - MLT1J LTR MaLR -330 181 1 551 198 24 8 chr18 1508164 1508290 -85169258 - MER39 LTR ERV1 0 707 580 2258 114 39 22 chr18 1508293 1508651 -85168897 - THE1B LTR MaLR 0 364 1 9756 113 7 0 chr18 1508651 1510005 -85167543 - THE1B-int LTR MaLR 0 1580 218 1746 157 48 53 chr18 1510005 1510289 -85167259 + THE1C LTR MaLR 22 305 -70 2142 133 0 19 chr18 1510289 1510605 -85166943 - AluSx SINE Alu 0 312 3 1746 157 48 53 chr18 1510605 1510676 -85166872 + THE1C LTR MaLR 305 375 0 2066 202 40 44 chr18 1511636 1512107 -85165441 + MLT1D LTR MaLR 3 473 -32 983 201 29 0 chr18 1512107 1512311 -85165237 + MER6B DNA MER2_type 1 210 0 2066 202 40 44 chr18 1512311 1512343 -85165205 + MLT1D LTR MaLR 473 504 -1 28 48 0 0 chr18 1513306 1513348 -85164200 + AT_rich Low_complexity Low_complexity 1 42 0 318 351 51 51 chr18 1513449 1513725 -85163823 + L1ME LINE L1 5338 5613 -508 1530 154 0 0 chr18 1514053 1514273 -85163275 + AluSx SINE Alu 1 220 -92 28 0 0 0 chr18 1515611 1515639 -85161909 + AT_rich Low_complexity Low_complexity 1 28 0 27 73 0 0 chr18 1515975 1516030 -85161518 + AT_rich Low_complexity Low_complexity 1 55 0 391 226 99 31 chr18 1516502 1516712 -85160836 + L1MA10 LINE L1 5945 6333 -1 347 277 124 28 chr18 1518062 1518239 -85159309 - MIR SINE MIR -49 213 20 299 186 26 128 chr18 1518278 1518358 -85159190 - L1ME4a LINE L1 -1 6120 6062 735 164 8 8 chr18 1518358 1518486 -85159062 + FLAM_C SINE Alu 1 128 -5 299 186 26 128 chr18 1518486 1518561 -85158987 - L1ME4a LINE L1 -59 6062 5981 1006 238 5 9 chr18 1518583 1518797 -85158751 - AluJo SINE Alu -99 213 1 741 311 57 26 chr18 1518865 1519248 -85158300 - LTR16A LTR ERVL -23 427 33 569 263 21 57 chr18 1519504 1519698 -85157850 - HERV16 LTR ERVL -3072 1924 1738 2241 229 60 12 chr18 1519727 1520691 -85156857 - L1ME4a LINE L1 -410 5756 4736 1037 106 66 0 chr18 1521121 1521272 -85156276 - AluSc SINE Alu -7 302 142 12653 226 40 16 chr18 1521274 1524851 -85152697 + L1MB1 LINE L1 1316 5115 -1433 2654 97 11 0 chr18 1524851 1525211 -85152337 - THE1B LTR MaLR 0 364 1 12653 226 40 16 chr18 1525211 1525933 -85151615 + L1MB1 LINE L1 5115 5819 -729 2256 187 30 5 chr18 1525940 1526347 -85151201 + MLT2B1 LTR ERVL 5 421 -99 2972 160 26 23 chr18 1526392 1526960 -85150588 + L1MB1 LINE L1 5833 6402 -2 513 316 163 3 chr18 1526977 1527265 -85150283 - MLT1I LTR MaLR -46 363 30 2112 27 0 12 chr18 1527265 1527522 -85150026 - L1PA4 LINE L1 -1 6154 5901 618 176 0 0 chr18 1527551 1527653 -85149895 + MLT1A1 LTR MaLR 1 102 -272 1105 140 18 140 chr18 1527800 1528078 -85149470 + MLT1A1 LTR MaLR 122 365 0 203 321 0 48 chr18 1528385 1528469 -85149079 - MIR3 SINE MIR -41 167 88 227 311 96 15 chr18 1529426 1529561 -85147987 + MIR SINE MIR 6 151 -111 1388 194 24 97 chr18 1529562 1529651 -85147897 + MER2 DNA MER2_type 2 96 -249 1786 80 24 0 chr18 1529651 1529900 -85147648 + L1PA10 LINE L1 5909 6163 -5 1388 194 24 97 chr18 1529900 1530181 -85147367 + MER2 DNA MER2_type 96 345 0 186 103 0 0 chr18 1530220 1530249 -85147299 + (TA)n Simple_repeat Simple_repeat 1 29 0 351 323 5 37 chr18 1530686 1530875 -85146673 + L2 LINE L2 3117 3299 -14 390 290 51 82 chr18 1531755 1532086 -85145462 + L2 LINE L2 2521 2841 -473 400 287 84 28 chr18 1532104 1532247 -85145301 + L2 LINE L2 3163 3313 0 2138 237 51 36 chr18 1532425 1533015 -85144533 - MLT1E2 LTR MaLR -2 624 26 302 326 104 10 chr18 1533513 1533672 -85143876 - MIR SINE MIR -67 141 20 658 268 155 5 chr18 1534294 1534507 -85143041 + MIR SINE MIR 18 262 0 1292 210 103 44 chr18 1535500 1535977 -85141571 - LTR10B LTR ERV1 0 505 1 1286 87 22 0 chr18 1536608 1536792 -85140756 + L1PA13 LINE L1 5971 6158 -5 428 214 54 9 chr18 1537992 1538104 -85139444 - MIR SINE MIR -65 197 81 492 146 87 10 chr18 1538945 1539048 -85138500 + L1MB2 LINE L1 6051 6161 -10 2059 110 10 17 chr18 1539053 1539215 -85138333 - AluSq SINE Alu -15 298 137 2466 50 0 0 chr18 1539215 1539514 -85138034 - AluY SINE Alu -12 299 1 2059 110 10 17 chr18 1539514 1539651 -85137897 - AluSq SINE Alu -176 137 1 204 151 14 68 chr18 1539661 1539734 -85137814 + (TTAAA)n Simple_repeat Simple_repeat 1 69 0 200 135 0 27 chr18 1539748 1539785 -85137763 + (TAA)n Simple_repeat Simple_repeat 2 37 0 27 29 0 0 chr18 1539914 1539948 -85137600 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr18 1540286 1540315 -85137233 + AT_rich Low_complexity Low_complexity 1 29 0 5461 28 0 0 chr18 1540403 1541044 -85136504 + L1PA4 LINE L1 5512 6152 -3 22 35 0 0 chr18 1541352 1541381 -85136167 + AT_rich Low_complexity Low_complexity 1 29 0 1564 136 65 71 chr18 1541762 1542101 -85135447 - MER1B DNA MER1_type 0 337 1 1633 143 39 36 chr18 1542129 1542436 -85135112 - AluJo SINE Alu -4 308 1 2259 224 67 19 chr18 1542580 1543321 -85134227 - L1ME2 LINE L1 -194 5904 5125 627 290 62 77 chr18 1543401 1544084 -85133464 - L1ME2 LINE L1 -2154 3926 3259 1766 88 107 0 chr18 1544084 1544347 -85133201 + AluSg SINE Alu 1 291 -19 627 290 62 77 chr18 1544347 1544610 -85132938 - L1ME2 LINE L1 -2821 3259 2994 23 0 0 0 chr18 1545067 1545090 -85132458 + AT_rich Low_complexity Low_complexity 1 23 0 376 340 119 35 chr18 1545206 1545518 -85132030 - HAL1b LINE L1 -442 906 569 1934 145 3 0 chr18 1546140 1546437 -85131111 - AluSx SINE Alu -14 298 1 810 238 35 19 chr18 1546438 1546699 -85130849 - L1ME2 LINE L1 -3187 2893 2629 432 264 108 13 chr18 1546714 1546945 -85130603 - L1ME2 LINE L1 -3486 2594 2342 231 260 109 28 chr18 1546998 1547240 -85130308 - L1ME2 LINE L1 -5073 1008 731 532 279 80 14 chr18 1547344 1547811 -85129737 - L1ME LINE L1 -3766 2314 1839 22 35 0 0 chr18 1547846 1547875 -85129673 + AT_rich Low_complexity Low_complexity 1 29 0 612 265 131 36 chr18 1547963 1548676 -85128872 - L1ME LINE L1 -4563 1539 731 14615 182 14 1 chr18 1548761 1549134 -85128414 - L1PB1 LINE L1 0 6867 6500 495 0 0 0 chr18 1549134 1549189 -85128359 + (TA)n Simple_repeat Simple_repeat 1 55 0 14615 182 14 1 chr18 1549189 1554612 -85122936 - L1PB1 LINE L1 -367 6500 749 819 281 166 9 chr18 1554985 1555408 -85122140 + L2 LINE L2 1441 1929 -1385 9288 159 40 31 chr18 1555427 1557564 -85119984 - L1MA5A LINE L1 -468 5829 3670 814 118 8 0 chr18 1557564 1557691 -85119857 + L1MA5A LINE L1 6165 6292 -5 9288 159 40 31 chr18 1557691 1557985 -85119563 - L1MA5A LINE L1 -2627 3670 3380 2720 120 14 2 chr18 1557991 1558433 -85119115 + L1MA5A LINE L1 5845 6291 -6 1256 312 43 20 chr18 1558440 1558999 -85118549 + L2 LINE L2 2737 3309 -4 1706 126 86 43 chr18 1560757 1561082 -85116466 - MER44D DNA MER2_type 0 609 1 801 318 26 26 chr18 1561869 1562247 -85115301 + MLT1I LTR MaLR 1 378 -31 290 282 141 21 chr18 1562836 1562978 -85114570 + L2 LINE L2 2895 3053 -219 410 327 68 23 chr18 1562979 1563199 -85114349 + MIR SINE MIR 1 230 -32 475 255 35 41 chr18 1563338 1563483 -85114065 - MER5B DNA MER1_type -21 157 14 260 212 0 91 chr18 1563483 1563549 -85113999 - MER5B DNA MER1_type -116 62 3 200 81 81 27 chr18 1563549 1563583 -85113965 + L2 LINE L2 3275 3310 -3 183 100 0 0 chr18 1564923 1564953 -85112595 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 1808 204 78 22 chr18 1565097 1565586 -85111962 + Charlie1b DNA MER1_type 1 516 -7 1810 268 192 7 chr18 1565923 1566663 -85110885 + L2 LINE L2 1109 1985 -1329 288 0 0 0 chr18 1568998 1569030 -85108518 + (TA)n Simple_repeat Simple_repeat 2 33 0 616 280 6 29 chr18 1569217 1569392 -85108156 - MER5B DNA MER1_type -7 171 1 272 302 62 0 chr18 1569414 1569510 -85108038 + MER94 DNA DNA 30 131 -3 357 304 187 30 chr18 1569511 1569810 -85107738 - L3 LINE CR1 -54 1523 1178 1903 119 4 0 chr18 1569847 1570115 -85107433 - AluSx SINE Alu -7 305 37 21 36 0 0 chr18 1570209 1570237 -85107311 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr18 1570560 1570591 -85106957 + AT_rich Low_complexity Low_complexity 1 31 0 875 56 0 0 chr18 1570820 1570964 -85106584 - AluSp/q SINE Alu 0 321 178 8264 200 53 63 chr18 1571196 1573188 -85104360 - L1MB7 LINE L1 -5 6179 4169 309 51 0 0 chr18 1573188 1573227 -85104321 + (TTA)n Simple_repeat Simple_repeat 2 40 0 8264 200 53 63 chr18 1573227 1574859 -85102689 - L1MB7 LINE L1 -2015 4169 2586 2216 110 0 7 chr18 1574859 1575167 -85102381 - AluSg SINE Alu 0 310 5 8264 200 53 63 chr18 1575167 1575299 -85102249 - L1MB7 LINE L1 -3598 2586 2454 668 173 20 7 chr18 1575389 1575539 -85102009 - L1P3 LINE L1 -5159 1302 1151 * 11948 196 31 12 chr18 1575538 1576252 -85101296 - L1P LINE L1 -1153 4993 4294 2963 87 5 0 chr18 1576252 1576655 -85100893 - L1PA7 LINE L1 0 6154 5750 11948 196 31 12 chr18 1576655 1579446 -85098102 - L1P LINE L1 -1852 4294 1427 295 281 45 45 chr18 1579464 1579642 -85097906 - L1M4 LINE L1 -4481 2657 2480 3172 242 47 40 chr18 1579786 1581417 -85096131 - L1M4 LINE L1 -4542 2417 819 2121 214 39 26 chr18 1581422 1581956 -85095592 + MER74A LTR ERVL 4 544 -14 467 237 99 8 chr18 1581975 1582106 -85095442 - L1M4 LINE L1 -6051 808 666 426 262 8 40 chr18 1582101 1582227 -85095321 - L1M4 LINE L1 -6727 132 11 * 2389 162 36 2 chr18 1582276 1582690 -85094858 - MSTA LTR MaLR 0 428 1 1535 207 24 37 chr18 1582793 1583169 -85094379 - MLT1A2 LTR MaLR -3 371 1 22 0 0 0 chr18 1583740 1583762 -85093786 + AT_rich Low_complexity Low_complexity 1 22 0 259 367 13 20 chr18 1583992 1584142 -85093406 - L2 LINE L2 -19 3294 3146 422 330 23 23 chr18 1584222 1584395 -85093153 + MIR SINE MIR 37 209 -53 429 318 20 40 chr18 1585294 1585495 -85092053 + MIR SINE MIR 11 207 -55 2237 235 48 65 chr18 1585505 1586509 -85091039 + L1M3e LINE L1 9 2192 -4845 1385 242 43 58 chr18 1587011 1587524 -85090024 + MLT1D LTR MaLR 1 505 0 336 316 109 27 chr18 1588074 1588330 -85089218 + HAL1 LINE L1 780 1056 -1451 307 295 93 8 chr18 1588354 1588483 -85089065 + HAL1 LINE L1 1108 1247 -1260 1201 258 157 31 chr18 1588493 1589074 -85088474 + HAL1 LINE L1 1268 1921 -586 233 263 45 75 chr18 1589615 1589748 -85087800 + HAL1b LINE L1 746 874 -474 28 29 0 0 chr18 1590063 1590098 -85087450 + AT_rich Low_complexity Low_complexity 1 35 0 324 0 0 0 chr18 1590183 1590219 -85087329 + (CA)n Simple_repeat Simple_repeat 2 37 0 423 314 71 0 chr18 1590261 1590430 -85087118 + MIR SINE MIR 76 256 -6 1743 114 6 112 chr18 1590850 1591340 -85086208 - LTR21B LTR ERV1 0 438 1 255 282 113 53 chr18 1591474 1591665 -85085883 + MIR SINE MIR 16 215 -47 2718 129 31 0 chr18 1592199 1592618 -85084930 - MSTB1 LTR MaLR 0 432 1 211 249 67 109 chr18 1593269 1593434 -85084114 - L2 LINE L2 -16 3297 3140 2236 132 84 8 chr18 1593660 1594054 -85083494 - MSTB LTR MaLR -2 424 1 2118 111 0 10 chr18 1594708 1595006 -85082542 - AluY SINE Alu -16 295 1 345 24 0 0 chr18 1595435 1595477 -85082071 + (CA)n Simple_repeat Simple_repeat 2 43 0 612 263 70 101 chr18 1595643 1596186 -85081362 - MLT1F LTR MaLR -14 528 3 254 186 0 0 chr18 1598257 1598300 -85079248 + MER58 DNA MER1_type 45 87 -254 23 33 0 0 chr18 1598403 1598433 -85079115 + AT_rich Low_complexity Low_complexity 1 30 0 284 189 0 11 chr18 1599511 1599606 -85077942 + (TA)n Simple_repeat Simple_repeat 2 95 0 3406 219 44 60 chr18 1599731 1600958 -85076590 + L1MCb LINE L1 1 1177 -5387 2409 91 0 0 chr18 1600958 1601265 -85076283 + AluSc SINE Alu 3 309 0 3406 219 44 60 chr18 1601265 1601877 -85075671 + L1MCb LINE L1 1177 1797 -4767 2076 144 12 58 chr18 1601926 1602169 -85075379 + L1MA5A LINE L1 5523 5775 -522 226 157 0 20 chr18 1602169 1602220 -85075328 - LTR66 LTR ERVL -166 444 395 2076 144 12 58 chr18 1602220 1602519 -85075029 + L1MA5A LINE L1 5775 6053 -244 1979 142 3 13 chr18 1602519 1602822 -85074726 - AluSx SINE Alu -12 300 1 2076 144 12 58 chr18 1602822 1602919 -85074629 + L1MA5A LINE L1 6053 6153 -144 9749 199 16 16 chr18 1602927 1604355 -85073193 + L1PA16 LINE L1 3013 4441 -1725 180 0 0 0 chr18 1604355 1604375 -85073173 + (CAA)n Simple_repeat Simple_repeat 1 20 0 9749 199 16 16 chr18 1604375 1606093 -85071455 + L1PA16 LINE L1 4441 6157 -9 1513 117 26 48 chr18 1606100 1606373 -85071175 - Tigger3b DNA MER2_type -649 582 316 2955 185 9 5 chr18 1606473 1607031 -85070517 + L1PA16 LINE L1 5598 6157 -9 3209 165 21 22 chr18 1607038 1607621 -85069927 - Tigger3b DNA MER2_type -649 582 1 907 253 12 12 chr18 1607621 1607862 -85069686 - L1MC4a LINE L1 -410 7398 7158 245 240 13 13 chr18 1607866 1607941 -85069607 - L1MC4 LINE L1 -965 7077 7003 2361 211 128 65 chr18 1607954 1608109 -85069439 - L1ME2 LINE L1 -8 6156 6012 2269 75 0 14 chr18 1608109 1608403 -85069145 - AluY SINE Alu -21 290 1 1838 168 0 7 chr18 1608404 1608701 -85068847 - AluJo SINE Alu -15 297 3 2361 211 128 65 chr18 1608701 1609378 -85068170 - L1ME2 LINE L1 -151 6013 5269 393 278 40 0 chr18 1609416 1609542 -85068006 - L1ME LINE L1 -468 5653 5523 927 157 6 0 chr18 1610031 1610197 -85067351 + L1MB3 LINE L1 6016 6182 -1 307 250 0 0 chr18 1610982 1611042 -85066506 - MIR SINE MIR -66 142 83 210 294 7 118 chr18 1611391 1611527 -85066021 - MIR SINE MIR -56 152 32 450 244 11 0 chr18 1613444 1613534 -85064014 + MLT1D LTR MaLR 1 91 -414 321 245 53 11 chr18 1613674 1613768 -85063780 - MLT1L LTR MaLR -171 444 347 876 63 0 0 chr18 1614103 1614214 -85063334 - AluY SINE Alu -2 309 199 232 175 0 0 chr18 1615105 1615145 -85062403 - L2 LINE L2 0 3313 3274 195 42 0 0 chr18 1616607 1616631 -85060917 + (TC)n Simple_repeat Simple_repeat 1 24 0 225 274 86 54 chr18 1617353 1617539 -85060009 + L1ME LINE L1 5298 5489 -2319 237 221 73 15 chr18 1617677 1617745 -85059803 + L1ME LINE L1 5731 5802 -360 28 29 0 0 chr18 1617846 1617881 -85059667 + AT_rich Low_complexity Low_complexity 1 35 0 1492 283 83 39 chr18 1618109 1619000 -85058548 - L1MC5 LINE L1 -551 7491 6588 22 35 0 0 chr18 1619052 1619081 -85058467 + AT_rich Low_complexity Low_complexity 1 29 0 261 275 85 55 chr18 1619291 1619491 -85058057 - L1MC4a LINE L1 -1548 6260 6055 340 273 82 49 chr18 1619785 1619854 -85057694 + L1MCc LINE L1 1215 1280 -5610 2507 104 14 14 chr18 1619854 1620218 -85057330 + THE1B LTR MaLR 1 364 0 340 273 82 49 chr18 1620218 1620682 -85056866 + L1MCc LINE L1 1280 1932 -4958 481 297 43 43 chr18 1620691 1620900 -85056648 + L1MCc LINE L1 1840 2048 -4895 276 258 21 21 chr18 1620906 1621003 -85056545 + LTR41 LTR ERVL 588 684 -89 2250 198 33 41 chr18 1621016 1621502 -85056046 - MLT1D LTR MaLR -3 502 21 293 159 16 0 chr18 1621536 1621599 -85055949 + LTR50 LTR ERVL 710 773 -22 229 245 13 94 chr18 1621657 1621816 -85055732 + L1MCc LINE L1 2940 3085 -3856 1672 286 124 17 chr18 1621920 1622991 -85054557 + L1MCc LINE L1 3452 4637 -2304 14099 219 33 20 chr18 1623097 1625902 -85051646 + L1PA15 LINE L1 1 2766 -4050 212 0 0 35 chr18 1625902 1625931 -85051617 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 14099 219 33 20 chr18 1625931 1628985 -85048563 + L1PA15 LINE L1 2766 6467 -349 387 0 0 0 chr18 1628985 1629028 -85048520 + (CA)n Simple_repeat Simple_repeat 2 44 0 14099 219 33 20 chr18 1629028 1629382 -85048166 + L1PA15 LINE L1 6467 6815 -1 704 280 56 35 chr18 1629384 1629760 -85047788 + L1MCc LINE L1 4759 5148 -1793 2066 143 102 8 chr18 1629760 1630151 -85047397 + MSTA LTR MaLR 1 428 0 704 280 56 35 chr18 1630151 1630235 -85047313 + L1MCc LINE L1 5148 5229 -1712 23 33 0 0 chr18 1630369 1630399 -85047149 + AT_rich Low_complexity Low_complexity 1 30 0 2018 106 0 24 chr18 1630434 1630762 -85046786 - AluSx SINE Alu 0 321 1 4280 214 35 48 chr18 1630858 1632993 -85044555 - L1MB8 LINE L1 -6 6172 4057 3769 225 39 73 chr18 1633015 1633936 -85043612 - L1MB8 LINE L1 -2470 3676 2828 1480 196 14 7 chr18 1633936 1634211 -85043337 + AluJb SINE Alu 1 277 -35 3769 225 39 73 chr18 1634211 1634866 -85042682 - L1MB8 LINE L1 -3318 2828 2153 244 264 102 56 chr18 1634955 1635171 -85042377 - L1M4 LINE L1 -4440 2698 2473 25 0 0 0 chr18 1635267 1635292 -85042256 + AT_rich Low_complexity Low_complexity 1 25 0 1828 221 35 121 chr18 1635396 1635506 -85042042 - L1M4 LINE L1 -4653 2306 2188 2770 149 7 2 chr18 1635506 1635950 -85041598 - L1PA16 LINE L1 -9 6157 5712 1828 221 35 121 chr18 1635950 1636924 -85040624 - L1M4 LINE L1 -4771 2188 1335 2203 105 3 0 chr18 1636924 1637233 -85040315 + AluSq SINE Alu 1 310 0 1828 221 35 121 chr18 1637233 1637338 -85040210 - L1M4 LINE L1 -5624 1335 1223 1939 330 75 8 chr18 1637872 1638695 -85038853 - L1M4 LINE L1 -5893 966 89 260 133 0 0 chr18 1638705 1638750 -85038798 + L1MA4A LINE L1 6236 6280 -23 702 208 121 38 chr18 1638756 1639055 -85038493 + L1ME1 LINE L1 5254 5518 -660 1278 251 26 68 chr18 1639061 1639100 -85038448 - MLT2B1 LTR ERVL -1 519 480 585 64 0 0 chr18 1639100 1639178 -85038370 + (TG)n Simple_repeat Simple_repeat 1 78 0 1278 251 26 68 chr18 1639178 1639667 -85037881 - MLT2B1 LTR ERVL -40 480 13 1709 191 136 11 chr18 1639677 1640142 -85037406 + L1ME1 LINE L1 5640 6162 -4 3113 203 53 38 chr18 1641289 1642103 -85035445 - LTR1B LTR ERV1 0 826 1 302 0 26 0 chr18 1643203 1643241 -85034307 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2257 72 4 0 chr18 1643243 1643521 -85034027 - AluY SINE Alu -32 279 1 3465 115 2 0 chr18 1643870 1644385 -85033163 - L1PA10 LINE L1 -1584 4562 4047 6347 99 6 2 chr18 1644385 1645980 -85031568 + L1PA10 LINE L1 4562 6163 -5 201 167 0 0 chr18 1646827 1646863 -85030685 + (TA)n Simple_repeat Simple_repeat 2 37 0 1208 325 94 27 chr18 1646897 1647556 -85029992 + L2 LINE L2 2133 2835 -479 910 238 16 0 chr18 1647649 1647842 -85029706 - L1M3b LINE L1 -4966 1315 1120 515 350 62 34 chr18 1648113 1648610 -85028938 - L1M3b LINE L1 -5769 512 2 1078 228 121 52 chr18 1649362 1649726 -85027822 - MLT1B LTR MaLR 0 390 2 426 283 174 53 chr18 1651107 1651446 -85026102 - L2 LINE L2 -106 3207 2828 970 191 0 98 chr18 1651622 1651868 -85025680 - MER58A DNA MER1_type 0 224 3 2179 169 21 30 chr18 1652729 1653102 -85024446 - MSTA LTR MaLR -1 427 57 2092 126 8 52 chr18 1653102 1653483 -85024065 + THE1B LTR MaLR 1 364 0 2179 169 21 30 chr18 1653483 1653540 -85024008 - MSTA LTR MaLR -371 57 1 203 298 0 0 chr18 1654077 1654124 -85023424 - MER5A DNA MER1_type -73 116 70 1057 168 19 0 chr18 1654879 1655093 -85022455 + L1MA8 LINE L1 6064 6281 -10 2004 41 0 97 chr18 1655114 1655404 -85022144 + AluY SINE Alu 34 295 -16 451 314 13 0 chr18 1656787 1656946 -85020602 + MARNA DNA Mariner 374 534 -52 375 285 38 38 chr18 1657352 1657510 -85020038 - MER117 DNA MER1_type -37 160 3 342 319 17 0 chr18 1657692 1657811 -85019737 - MIR SINE MIR -74 188 68 452 309 25 22 chr18 1657866 1658141 -85019407 - L1 LINE L1 -1810 4336 4061 31 58 0 0 chr18 1658191 1658243 -85019305 + AT_rich Low_complexity Low_complexity 1 52 0 1239 197 54 20 chr18 1658260 1658554 -85018994 - L1MB8 LINE L1 -1 6177 5874 760 330 81 40 chr18 1658853 1659726 -85017822 - L1 LINE L1 -2608 3538 2630 625 281 43 9 chr18 1660187 1660418 -85017130 - HAL1b LINE L1 -795 553 315 556 241 155 37 chr18 1660483 1660794 -85016754 - MLT1J2 LTR MaLR -56 353 1 413 254 59 59 chr18 1661343 1661643 -85015905 + MLT1J1 LTR MaLR 150 443 -3 320 252 79 29 chr18 1661782 1661921 -85015627 - MLT1J1 LTR MaLR -298 148 3 230 247 0 55 chr18 1661921 1661994 -85015554 - HAL1b LINE L1 -1046 302 234 10332 177 29 9 chr18 1662346 1664149 -85013399 + L1M1 LINE L1 17 1855 -5710 6778 138 12 17 chr18 1664160 1665881 -85011667 + L1M1 LINE L1 5505 7229 -495 1305 63 6 6 chr18 1665879 1666053 -85011495 + L1M1 LINE L1 5637 5810 -494 * 3745 99 25 2 chr18 1666051 1666605 -85010943 + L1MA3 LINE L1 5637 6203 -102 390 310 23 16 chr18 1667785 1667914 -85009634 - MIR3 SINE MIR -39 169 40 263 341 28 68 chr18 1668471 1668647 -85008901 - L2 LINE L2 -2 3270 3102 954 110 0 182 chr18 1668805 1669041 -85008507 - 7SK RNA RNA 0 193 1 215 77 0 51 chr18 1669080 1669119 -85008429 + (CATA)n Simple_repeat Simple_repeat 2 38 0 218 360 24 82 chr18 1669928 1670220 -85007328 - L2 LINE L2 -508 2806 2532 2194 198 25 6 chr18 1670230 1670633 -85006915 + L1MA2 LINE L1 4887 5302 -844 3742 35 4 9 chr18 1670633 1671093 -85006455 + L1PA4 LINE L1 5696 6153 -2 2194 198 25 6 chr18 1671093 1671165 -85006383 + L1MA2 LINE L1 5302 5371 -775 4963 114 23 15 chr18 1671173 1671950 -85005598 + L1MA2 LINE L1 5511 6304 0 2135 97 210 21 chr18 1674225 1674606 -85002942 + MLT2A2 LTR ERVL 1 453 0 1822 55 8 0 chr18 1674606 1674842 -85002706 + HERVL-A2 LTR ERVL 1 238 -5416 * 21092 61 11 6 chr18 1674837 1677384 -85000164 + HERVL-A1 LTR ERVL 3008 5569 -85 2222 90 28 3 chr18 1677384 1677674 -84999874 - AluSc SINE Alu -12 297 1 21092 61 11 6 chr18 1677674 1677761 -84999787 + HERVL-A1 LTR ERVL 5569 5654 0 2791 86 69 14 chr18 1677761 1678141 -84999407 + MLT2A1 LTR ERVL 1 408 -36 701 20 49 0 chr18 1678141 1678243 -84999305 + (TCTA)n Simple_repeat Simple_repeat 3 109 0 2791 86 69 14 chr18 1678243 1678283 -84999265 + MLT2A1 LTR ERVL 408 444 0 1812 175 43 3 chr18 1678586 1678911 -84998637 - LTR53 LTR ERVL -181 338 1 1467 212 35 35 chr18 1679627 1679995 -84997553 - MLT1A2 LTR MaLR 0 374 7 40461 65 8 7 chr18 1680178 1686327 -84991221 + L1PA5 LINE L1 13 6162 0 189 152 30 0 chr18 1686609 1686642 -84990906 - L2 LINE L2 -72 3241 3208 1005 81 0 62 chr18 1687745 1687905 -84989643 - L1MA5 LINE L1 -4 6296 6147 2572 235 56 19 chr18 1687958 1688967 -84988581 + L1ME2 LINE L1 5079 6332 -2 558 297 38 10 chr18 1689026 1689235 -84988313 - LTR33 LTR ERVL 0 521 307 290 339 104 0 chr18 1689362 1689477 -84988071 - L2 LINE L2 -507 2807 2681 193 250 71 0 chr18 1689899 1689955 -84987593 + L2 LINE L2 3250 3309 -4 1022 219 77 107 chr18 1690253 1690710 -84986838 + MSTB2 LTR MaLR 15 457 0 295 308 233 0 chr18 1691199 1691358 -84986190 + MIR3 SINE MIR 4 199 -9 26 0 0 0 chr18 1691796 1691822 -84985726 + AT_rich Low_complexity Low_complexity 1 26 0 402 46 215 0 chr18 1691971 1692036 -84985512 + MADE1 DNA Mariner 1 79 -1 309 51 0 0 chr18 1692092 1692131 -84985417 + (CA)n Simple_repeat Simple_repeat 1 39 0 496 276 89 5 chr18 1692211 1692425 -84985123 - L1MC/D LINE L1 -1985 5823 5592 828 274 19 0 chr18 1692481 1692693 -84984855 + MIR SINE MIR 47 262 0 421 279 111 36 chr18 1692739 1693208 -84984340 - L1MC/D LINE L1 -774 5372 4986 234 200 33 17 chr18 1693213 1693273 -84984275 - L1P LINE L1 -1185 4961 4901 595 327 91 31 chr18 1693524 1694083 -84983465 - L1MC/D LINE L1 -1494 4652 4061 30 27 0 0 chr18 1694110 1694147 -84983401 + AT_rich Low_complexity Low_complexity 1 37 0 243 306 22 0 chr18 1694173 1694307 -84983241 - L1MC/D LINE L1 -2178 3968 3832 1133 44 0 0 chr18 1696491 1696627 -84980921 + L1PA3 LINE L1 6013 6148 -7 254 317 102 6 chr18 1697001 1697168 -84980380 + L1MEc LINE L1 249 431 -6132 636 316 47 34 chr18 1697238 1697744 -84979804 + L1MEc LINE L1 1265 1777 -4786 632 102 0 0 chr18 1697810 1697908 -84979640 + L1MEc LINE L1 2278 2375 -4009 2119 148 3 11 chr18 1697908 1698285 -84979263 + L1MB3 LINE L1 5808 6181 -2 448 262 59 21 chr18 1698290 1698477 -84979071 + L1MEc LINE L1 1627 1820 -4576 267 246 36 18 chr18 1698492 1698602 -84978946 + L1MEc LINE L1 1874 1985 -4411 2338 248 49 42 chr18 1698613 1699288 -84978260 + L1M4 LINE L1 3813 4499 -1647 7750 22 0 0 chr18 1699288 1700271 -84977277 + L1PA2 LINE L1 5172 6154 -1 2338 248 49 42 chr18 1700271 1700577 -84976971 + L1M4 LINE L1 4499 4801 -1345 2202 108 0 10 chr18 1701244 1701551 -84975997 + AluY SINE Alu 1 304 -7 642 122 37 0 chr18 1703160 1703267 -84974281 + L1PA15 LINE L1 6052 6162 -3 923 245 70 15 chr18 1703360 1703633 -84973915 + L1ME3A LINE L1 5878 6165 -5 320 221 0 47 chr18 1703629 1703640 -84973908 + L1M4 LINE L1 4729 4739 -1407 * 200 83 0 28 chr18 1703640 1703676 -84973872 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 320 221 0 47 chr18 1703676 1703750 -84973798 + L1M4 LINE L1 4739 4810 -1336 636 139 0 37 chr18 1703750 1703878 -84973670 + AluJb SINE Alu 178 301 0 646 297 35 31 chr18 1703922 1704388 -84973160 + L1MEd LINE L1 1060 1566 -4744 2023 161 107 16 chr18 1704394 1704583 -84972965 - MLT2D LTR ERVL -3 411 241 889 63 87 0 chr18 1704583 1704710 -84972838 - MER85 DNA T2_type -1 138 1 2023 161 107 16 chr18 1704710 1704893 -84972655 - MLT2D LTR ERVL -173 241 5 21 0 0 0 chr18 1705707 1705728 -84971820 + AT_rich Low_complexity Low_complexity 1 21 0 306 103 17 0 chr18 1705736 1705794 -84971754 - L1MA3 LINE L1 0 6305 6247 203 289 36 0 chr18 1706957 1707040 -84970508 + (CATATA)n Simple_repeat Simple_repeat 6 91 0 2287 75 4 4 chr18 1708277 1708584 -84968964 + AluSc SINE Alu 1 307 0 5957 146 35 35 chr18 1708901 1710657 -84966891 - L1MA3 LINE L1 -45 6260 4519 1570 219 65 0 chr18 1710662 1710986 -84966562 - L1M1 LINE L1 -7204 361 17 253 284 25 0 chr18 1711485 1711566 -84965982 + CT-rich Low_complexity Low_complexity 1 83 0 23 54 0 0 chr18 1712600 1712637 -84964911 + AT_rich Low_complexity Low_complexity 1 37 0 1036 272 57 67 chr18 1713334 1713365 -84964183 + LTR33A LTR ERVL 1 31 -492 1293 226 43 54 chr18 1713365 1713733 -84963815 - MLT1A1 LTR MaLR -1 364 1 1036 272 57 67 chr18 1713733 1714227 -84963321 + LTR33A LTR ERVL 31 521 -2 457 297 55 85 chr18 1714271 1714763 -84962785 + L1ME LINE L1 21 497 -5573 2253 101 0 0 chr18 1714906 1715220 -84962328 + AluSx SINE Alu 1 314 0 266 323 81 5 chr18 1715241 1715355 -84962193 + L1ME LINE L1 574 709 -5361 396 0 0 0 chr18 1715355 1715399 -84962149 + (CA)n Simple_repeat Simple_repeat 2 45 0 266 323 81 5 chr18 1715399 1715470 -84962078 + L1ME LINE L1 709 773 -5297 916 144 53 5 chr18 1715553 1715741 -84961807 - L1MB3 LINE L1 -2 6181 5985 687 302 104 25 chr18 1716196 1716593 -84960955 + ERVL LTR ERVL 1933 2410 -2993 2186 113 0 0 chr18 1717232 1717525 -84960023 + AluSx SINE Alu 1 293 -19 313 381 32 11 chr18 1717649 1717838 -84959710 - L2 LINE L2 -361 2953 2761 * 498 286 22 60 chr18 1717833 1718015 -84959533 + MER5A DNA MER1_type 15 189 0 939 315 64 47 chr18 1718139 1718684 -84958864 - L2 LINE L2 0 3313 2761 195 351 37 42 chr18 1718802 1718993 -84958555 - L2 LINE L2 -816 2498 2309 771 214 69 0 chr18 1719051 1719210 -84958338 - FRAM SINE Alu -9 167 1 234 268 12 37 chr18 1719210 1719292 -84958256 - MLT1J LTR MaLR -45 466 387 1754 236 70 25 chr18 1719331 1719815 -84957733 - MER74B LTR ERVL -58 564 59 701 293 70 0 chr18 1719811 1720040 -84957508 - MLT1J LTR MaLR -109 402 158 * 2077 130 3 0 chr18 1721781 1722073 -84955475 - AluSx SINE Alu -19 293 1 193 186 70 0 chr18 1722254 1722297 -84955251 - L2 LINE L2 -2927 387 342 25 0 0 0 chr18 1722445 1722470 -84955078 + AT_rich Low_complexity Low_complexity 1 25 0 1321 86 0 0 chr18 1722470 1722633 -84954915 - AluSq SINE Alu -150 163 1 189 0 0 0 chr18 1722644 1722665 -84954883 + (T)n Simple_repeat Simple_repeat 1 21 0 312 149 0 45 chr18 1722665 1722732 -84954816 - LTR19C LTR ERV1 -87 692 629 351 303 30 68 chr18 1722972 1723104 -84954444 + MIR3 SINE MIR 36 162 -46 346 346 58 43 chr18 1723204 1723531 -84954017 - L1ME3A LINE L1 0 6170 5839 492 261 25 19 chr18 1723537 1723694 -84953854 - L2 LINE L2 -2 3311 3154 210 167 0 0 chr18 1723694 1723730 -84953818 + (TAGA)n Simple_repeat Simple_repeat 3 38 0 209 143 0 41 chr18 1723887 1723936 -84953612 + (TATG)n Simple_repeat Simple_repeat 1 47 0 1420 197 132 6 chr18 1723940 1724265 -84953283 - MLT2D LTR ERVL -48 366 1 2820 280 78 43 chr18 1724273 1725544 -84952004 - L2 LINE L2 -290 3023 1705 1112 201 30 0 chr18 1725563 1725826 -84951722 - L1 LINE L1 -849 5297 5027 919 174 7 0 chr18 1725826 1725981 -84951567 + L1PB4 LINE L1 5997 6152 -4 1462 264 107 20 chr18 1725981 1726478 -84951070 - L2 LINE L2 -1620 1694 1155 277 274 281 18 chr18 1726479 1726643 -84950905 + L2 LINE L2 2688 2894 -420 199 331 125 64 chr18 1726665 1726834 -84950714 + L2 LINE L2 2998 3194 -119 2316 93 0 3 chr18 1726834 1727134 -84950414 + AluSp SINE Alu 1 299 -14 199 331 125 64 chr18 1727134 1727260 -84950288 + L2 LINE L2 3194 3311 -2 408 262 111 12 chr18 1727280 1727452 -84950096 + HAL1 LINE L1 1403 1591 -916 21 0 0 0 chr18 1727459 1727480 -84950068 + AT_rich Low_complexity Low_complexity 1 21 0 19875 184 22 14 chr18 1727493 1730308 -84947240 + L1PA13 LINE L1 1 2790 -4024 1422 80 5 10 chr18 1730308 1730488 -84947060 + L1PA5 LINE L1 5952 6151 -3 19875 184 22 14 chr18 1730488 1734417 -84943131 + L1PA13 LINE L1 2790 6812 -2 258 352 31 10 chr18 1734413 1734606 -84942942 + HAL1 LINE L1 1601 1797 -710 * 226 317 84 42 chr18 1734919 1735086 -84942462 + MLT1L LTR MaLR 360 533 -82 2484 32 0 0 chr18 1735373 1735694 -84941854 + AluY SINE Alu 1 321 0 21 36 0 0 chr18 1735827 1735855 -84941693 + AT_rich Low_complexity Low_complexity 1 28 0 384 298 76 38 chr18 1735977 1736315 -84941233 + HAL1b LINE L1 766 2505 -2 271 242 0 16 chr18 1736753 1736815 -84940733 + LTR33A LTR ERVL 444 504 -19 243 319 42 0 chr18 1736871 1736943 -84940605 - MIR3 SINE MIR 0 208 134 315 239 23 11 chr18 1736970 1737058 -84940490 - LTR33 LTR ERVL -9 512 424 888 256 66 15 chr18 1737098 1737372 -84940176 - LTR33 LTR ERVL -233 288 1 271 284 15 0 chr18 1737515 1737582 -84939966 + L2 LINE L2 3229 3296 -17 283 252 84 76 chr18 1737775 1737894 -84939654 - L2 LINE L2 -1 3271 3152 21 0 0 0 chr18 1738191 1738212 -84939336 + AT_rich Low_complexity Low_complexity 1 21 0 569 285 38 72 chr18 1738560 1738823 -84938725 - MIR SINE MIR -8 254 1 2681 107 89 5 chr18 1739368 1739815 -84937733 - MER31A LTR ERV1 0 485 1 315 292 23 18 chr18 1741354 1741525 -84936023 + T-rich Low_complexity Low_complexity 4 175 0 1343 213 91 12 chr18 1742174 1742494 -84935054 + MER2 DNA MER2_type 1 345 0 489 246 0 0 chr18 1743162 1743300 -84934248 + L1MA10 LINE L1 6183 6320 -14 386 210 98 13 chr18 1743347 1743504 -84934044 + L1ME LINE L1 5290 5462 -753 1020 306 76 73 chr18 1743631 1745101 -84932447 + L1MEd LINE L1 18 1585 -905 498 132 35 35 chr18 1745178 1745292 -84932256 + L1MA4 LINE L1 6186 6299 -1 279 253 40 73 chr18 1745374 1745574 -84931974 + L1ME LINE L1 5683 5873 -297 22 0 0 0 chr18 1745624 1745646 -84931902 + AT_rich Low_complexity Low_complexity 1 22 0 312 286 36 0 chr18 1746095 1746179 -84931369 - HERV16 LTR ERVL -1912 3084 2998 331 252 37 37 chr18 1746303 1746410 -84931138 - HERV16 LTR ERVL -2219 2777 2671 320 269 26 0 chr18 1746483 1746561 -84930987 - HERV16 LTR ERVL -4560 436 357 421 311 57 0 chr18 1746760 1746882 -84930666 - HERV16 LTR ERVL -4867 129 1 757 349 34 29 chr18 1746888 1747298 -84930250 - LTR16A LTR ERVL -6 444 33 22 35 0 0 chr18 1747423 1747452 -84930096 + AT_rich Low_complexity Low_complexity 1 29 0 213 153 28 69 chr18 1747461 1747533 -84930015 + GA-rich Low_complexity Low_complexity 3 71 0 512 265 14 0 chr18 1749151 1749298 -84928250 + L1MEc LINE L1 39 187 -6209 * 2349 275 33 16 chr18 1749288 1750511 -84927037 + L1MEc LINE L1 492 1863 -4533 480 256 50 0 chr18 1750520 1750641 -84926907 + L1ME3A LINE L1 44 170 -6226 532 289 121 43 chr18 1750705 1751235 -84926313 + L1ME3A LINE L1 2329 2899 -3316 2501 53 0 0 chr18 1751245 1751544 -84926004 + AluY SINE Alu 1 299 -12 1341 287 151 30 chr18 1751579 1752004 -84925544 + L1ME3A LINE L1 3091 3463 -2752 2406 38 10 0 chr18 1752004 1752297 -84925251 + AluY SINE Alu 1 296 -15 1341 287 151 30 chr18 1752297 1753235 -84924313 + L1ME3A LINE L1 3463 4619 -1596 311 271 24 0 chr18 1753240 1753325 -84924223 - MLT1H LTR MaLR 0 549 463 389 248 30 20 chr18 1753542 1753643 -84923905 - MLT1H LTR MaLR -258 291 190 732 259 46 24 chr18 1753714 1754084 -84923464 + L1ME3A LINE L1 4618 5049 -1166 240 143 0 0 chr18 1754086 1754128 -84923420 + (CA)n Simple_repeat Simple_repeat 1 42 0 313 344 14 5 chr18 1754145 1754357 -84923191 + L1ME3A LINE L1 5073 5286 -929 1748 279 76 16 chr18 1754378 1755130 -84922418 + L1ME3A LINE L1 5343 6139 -100 232 370 91 53 chr18 1755893 1756342 -84921206 + L2 LINE L2 1964 2429 -885 213 65 0 0 chr18 1756480 1756511 -84921037 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 458 355 37 12 chr18 1757006 1757248 -84920300 + L3 LINE CR1 1310 1557 -20 2270 95 3 0 chr18 1759574 1759879 -84917669 - AluSp SINE Alu -7 306 1 237 294 196 20 chr18 1760204 1760306 -84917242 + L2 LINE L2 3149 3268 -4 195 129 0 0 chr18 1760580 1760611 -84916937 + (T)n Simple_repeat Simple_repeat 1 31 0 317 294 48 62 chr18 1761795 1761941 -84915607 - L2 LINE L2 -8 3305 3162 220 258 75 75 chr18 1761993 1762086 -84915462 - L2 LINE L2 -307 2965 2873 1344 304 91 72 chr18 1762098 1763302 -84914246 - L2 LINE L2 -351 2921 1701 2306 122 30 22 chr18 1763336 1763697 -84913851 + THE1B LTR MaLR 1 364 0 2296 105 3 0 chr18 1764547 1764852 -84912696 + AluSx SINE Alu 1 306 -6 288 0 0 0 chr18 1764852 1764884 -84912664 + (TA)n Simple_repeat Simple_repeat 2 33 0 2299 103 0 0 chr18 1765920 1766231 -84911317 - AluY SINE Alu 0 311 1 959 217 105 58 chr18 1766313 1766608 -84910940 - MLT1A1 LTR MaLR -1 364 56 347 96 0 16 chr18 1766898 1766966 -84910582 - L1MA4A LINE L1 0 6279 6090 * 369 184 58 0 chr18 1766949 1767036 -84910512 + L1PA16 LINE L1 5750 5841 -325 886 210 27 0 chr18 1767666 1767852 -84909696 + Charlie1 DNA MER1_type 50 240 -2521 466 40 14 27 chr18 1767867 1767941 -84909607 + (TAGA)n Simple_repeat Simple_repeat 4 76 0 456 198 0 0 chr18 1767941 1768022 -84909526 + Charlie1 DNA MER1_type 2675 2755 -6 583 257 40 7 chr18 1768252 1768400 -84909148 + MIR SINE MIR 100 252 -10 471 152 16 66 chr18 1768488 1768626 -84908922 - L1MA7 LINE L1 -331 5858 5728 361 151 0 27 chr18 1768629 1768702 -84908846 - L1M1 LINE L1 -507 5793 5723 197 410 60 0 chr18 1769668 1769751 -84907797 - L2 LINE L2 -42 3230 3143 1749 171 7 0 chr18 1772096 1772398 -84905150 - AluJo SINE Alu 0 304 1 840 306 56 0 chr18 1772411 1772695 -84904853 + MER69 DNA AcHobo 37 336 -2190 348 328 9 9 chr18 1772768 1772884 -84904664 + MER45 DNA AcHobo 1 116 -924 627 234 11 0 chr18 1773411 1773586 -84903962 + MER69 DNA AcHobo 1641 1817 -709 1593 230 46 38 chr18 1773662 1774210 -84903338 + MER69 DNA AcHobo 1975 2526 0 260 290 0 0 chr18 1774486 1774548 -84903000 - MIR3 SINE MIR -36 172 111 382 278 111 8 chr18 1774631 1774757 -84902791 - L2 LINE L2 -3 3310 3172 21 0 0 0 chr18 1775097 1775118 -84902430 + AT_rich Low_complexity Low_complexity 1 21 0 574 283 47 67 chr18 1775791 1776091 -84901457 - L2 LINE L2 -145 3168 2875 1324 215 97 23 chr18 1776496 1776981 -84900567 - L1M4 LINE L1 -695 5489 4955 3660 139 77 20 chr18 1776982 1777601 -84899947 - Tigger3(Golem) DNA MER2_type -1 3028 2363 2242 109 3 0 chr18 1777601 1777903 -84899645 + AluSg SINE Alu 1 303 -7 3660 139 77 20 chr18 1777903 1777987 -84899561 - Tigger3(Golem) DNA MER2_type -666 2363 2285 627 181 29 0 chr18 1777987 1778092 -84899456 - Tigger3(Golem) DNA MER2_type -2921 108 1 760 234 5 0 chr18 1778104 1778288 -84899260 - L1M4 LINE L1 -1222 4924 4740 1906 267 25 22 chr18 1778289 1778930 -84898618 + L1ME2 LINE L1 5511 6153 -11 1816 118 0 0 chr18 1778931 1779177 -84898371 + AluSq SINE Alu 51 296 -17 2163 108 0 7 chr18 1779699 1779996 -84897552 + AluSq SINE Alu 1 295 -18 725 314 91 29 chr18 1780354 1780771 -84896777 + L2 LINE L2 2519 2961 -353 994 317 80 20 chr18 1781032 1781708 -84895840 - L2 LINE L2 -3 3310 2583 406 317 59 0 chr18 1781713 1781899 -84895649 - L2 LINE L2 -1150 2164 1968 * 422 329 6 63 chr18 1781884 1782042 -84895506 + L2 LINE L2 3105 3253 -19 199 222 0 0 chr18 1782010 1782046 -84895502 + MIR SINE MIR 218 253 -9 * 338 256 22 0 chr18 1782238 1782328 -84895220 + L2 LINE L2 2231 2322 -992 494 221 52 15 chr18 1782362 1782498 -84895050 + L2 LINE L2 2757 2897 -417 431 228 22 59 chr18 1782760 1782896 -84894652 + L2 LINE L2 3164 3294 -19 253 352 70 14 chr18 1784466 1784608 -84892940 + MIR SINE MIR 7 156 -106 2334 104 0 0 chr18 1785152 1785459 -84892089 + AluSc SINE Alu 1 307 -2 421 209 35 0 chr18 1786311 1786397 -84891151 + Charlie1 DNA MER1_type 149 237 -2524 * 534 199 7 34 chr18 1786382 1786528 -84891020 + Charlie1 DNA MER1_type 2620 2761 0 410 306 55 51 chr18 1787035 1787310 -84890238 + L1M4 LINE L1 2218 2493 -3653 21 71 0 0 chr18 1787465 1787507 -84890041 + AT_rich Low_complexity Low_complexity 1 42 0 945 157 52 0 chr18 1787765 1787918 -84889630 + FRAM SINE Alu 1 158 -18 25 31 0 0 chr18 1787918 1787950 -84889598 + AT_rich Low_complexity Low_complexity 1 32 0 542 221 52 0 chr18 1788416 1788552 -84888996 - Charlie1 DNA MER1_type 0 2761 2619 * 992 232 30 13 chr18 1788538 1788771 -84888777 - Charlie1 DNA MER1_type -2524 237 1 262 293 19 0 chr18 1788876 1788982 -84888566 + L1ME LINE L1 5777 5884 -280 2084 35 4 0 chr18 1789047 1789393 -84888155 - L1P2 LINE L1 -636 5518 5172 1032 37 0 8 chr18 1789391 1789525 -84888023 + L1PA4 LINE L1 5920 6052 -103 * 457 297 55 85 chr18 1789704 1790196 -84887352 + L1ME LINE L1 21 497 -5573 2253 101 0 0 chr18 1790339 1790653 -84886895 + AluSx SINE Alu 1 314 0 266 323 81 5 chr18 1790674 1790788 -84886760 + L1ME LINE L1 574 709 -5361 360 0 0 0 chr18 1790788 1790828 -84886720 + (CA)n Simple_repeat Simple_repeat 2 41 0 266 323 81 5 chr18 1790828 1790899 -84886649 + L1ME LINE L1 709 773 -5297 916 144 53 5 chr18 1790982 1791170 -84886378 - L1MB3 LINE L1 -2 6181 5985 687 302 104 25 chr18 1791625 1792022 -84885526 + ERVL LTR ERVL 1933 2410 -2993 2186 113 0 0 chr18 1792661 1792954 -84884594 + AluSx SINE Alu 1 293 -19 313 381 32 11 chr18 1793078 1793267 -84884281 - L2 LINE L2 -361 2953 2761 * 498 286 22 60 chr18 1793262 1793444 -84884104 + MER5A DNA MER1_type 15 189 0 939 315 64 47 chr18 1793568 1794113 -84883435 - L2 LINE L2 0 3313 2761 195 351 37 42 chr18 1794231 1794422 -84883126 - L2 LINE L2 -816 2498 2309 771 214 69 0 chr18 1794480 1794639 -84882909 - FRAM SINE Alu -9 167 1 234 268 12 37 chr18 1794639 1794721 -84882827 - MLT1J LTR MaLR -45 466 387 1754 236 70 25 chr18 1794760 1795244 -84882304 - MER74B LTR ERVL -58 564 59 701 293 70 0 chr18 1795240 1795469 -84882079 - MLT1J LTR MaLR -109 402 158 * 2048 134 3 0 chr18 1797210 1797502 -84880046 - AluSx SINE Alu -19 293 1 193 186 70 0 chr18 1797683 1797726 -84879822 - L2 LINE L2 -2927 387 342 25 0 0 0 chr18 1797874 1797899 -84879649 + AT_rich Low_complexity Low_complexity 1 25 0 1291 98 0 0 chr18 1797899 1798062 -84879486 - AluSq SINE Alu -150 163 1 3084 146 77 13 chr18 1798084 1798681 -84878867 + Tigger3(Golem) DNA MER2_type 2394 3028 -1 1295 215 98 21 chr18 1798682 1799166 -84878382 + L1M4 LINE L1 4955 5489 -695 581 283 47 67 chr18 1799571 1799871 -84877677 + L2 LINE L2 2875 3168 -145 21 0 0 0 chr18 1800544 1800565 -84876983 + AT_rich Low_complexity Low_complexity 1 21 0 386 278 111 8 chr18 1800905 1801031 -84876517 + L2 LINE L2 3172 3310 -3 246 306 0 0 chr18 1801114 1801176 -84876372 + MIR3 SINE MIR 111 172 -36 1673 242 136 28 chr18 1801450 1802249 -84875299 - MER69 DNA AcHobo 0 2526 1641 335 336 9 9 chr18 1802776 1802892 -84874656 - MER45 DNA AcHobo -1465 116 1 315 280 85 0 chr18 1802964 1803082 -84874466 - MER69 DNA AcHobo -2190 336 209 503 299 154 5 chr18 1803231 1803445 -84874103 - MIR SINE MIR -14 248 3 673 259 106 62 chr18 1803691 1803965 -84873583 + MLT1I LTR MaLR 121 406 -3 195 286 16 32 chr18 1804281 1804344 -84873204 - L2 LINE L2 0 3272 3211 595 251 64 39 chr18 1804482 1804505 -84873043 + MLT2C1 LTR ERVL 20 227 -170 599 211 33 83 chr18 1804505 1804685 -84872863 + MLT1E3 LTR MaLR 64 234 -390 227 284 93 36 chr18 1804736 1804930 -84872618 - L1ME LINE L1 -277 5885 5681 382 329 70 19 chr18 1804955 1805374 -84872174 - L1ME LINE L1 -473 5697 5258 42621 35 20 2 chr18 1806042 1812085 -84865463 + L1PA3 LINE L1 1 6152 -3 195 0 27 54 chr18 1812097 1812134 -84865414 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 3037 224 78 27 chr18 1812467 1813235 -84864313 - MER21B LTR ERV1 -38 825 19 2503 244 60 29 chr18 1813687 1815364 -84862184 - L1ME2 LINE L1 -2 6332 4397 972 274 85 25 chr18 1815399 1815833 -84861715 + MLT1C LTR MaLR 8 467 0 4148 261 100 16 chr18 1815838 1817561 -84859987 - L1ME2 LINE L1 -1795 4351 2438 1848 103 0 33 chr18 1817561 1817833 -84859715 - AluSg SINE Alu 0 310 48 4148 261 100 16 chr18 1817833 1818086 -84859462 - L1ME2 LINE L1 -3708 2438 2208 19984 172 20 8 chr18 1818091 1825705 -84851843 + L1MA2 LINE L1 16 7723 0 1831 186 88 30 chr18 1825687 1826308 -84851240 + L1MC/D LINE L1 5009 5661 -581 * 197 200 25 0 chr18 1827276 1827316 -84850232 - L2 LINE L2 -11 3302 3262 204 40 0 0 chr18 1828158 1828183 -84849365 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 342 45 0 0 chr18 1828182 1828226 -84849322 + (CA)n Simple_repeat Simple_repeat 1 44 0 2418 38 24 0 chr18 1828899 1829188 -84848360 + AluY SINE Alu 1 296 -15 530 244 6 64 chr18 1829404 1829576 -84847972 - MER112 DNA MER1_type -7 253 92 239 203 17 0 chr18 1829578 1829637 -84847911 + (TCCA)n Simple_repeat Simple_repeat 2 61 0 247 323 0 68 chr18 1829697 1829830 -84847718 - L2 LINE L2 -217 3055 2932 1124 186 11 68 chr18 1829900 1830179 -84847369 - L1MB8 LINE L1 0 6178 5916 482 222 0 0 chr18 1830186 1830285 -84847263 - L1M4 LINE L1 -2289 3857 3759 2840 158 104 13 chr18 1830295 1830416 -84847132 - L1MA9 LINE L1 -7 6305 6196 189 0 0 0 chr18 1830416 1830437 -84847111 + (TG)n Simple_repeat Simple_repeat 2 22 0 2840 158 104 13 chr18 1830437 1830910 -84846638 - L1MA9 LINE L1 -116 6196 5657 415 141 48 0 chr18 1830913 1831003 -84846545 - L1M4 LINE L1 -2392 3754 3660 256 200 0 31 chr18 1831014 1831079 -84846469 + MER103 DNA DNA 54 116 -50 1878 137 3 21 chr18 1832589 1833053 -84844495 - AluJb SINE Alu 0 463 5 181 238 12 62 chr18 1833271 1833351 -84844197 + L2 LINE L2 1638 1713 -1601 21 0 0 0 chr18 1833518 1833539 -84844009 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 1834233 1834254 -84843294 + AT_rich Low_complexity Low_complexity 1 21 0 192 305 61 61 chr18 1835320 1835402 -84842146 - L2 LINE L2 -43 3229 3148 1955 186 3 35 chr18 1835838 1836119 -84841429 + MLT1A1 LTR MaLR 1 269 -96 4789 95 19 10 chr18 1836119 1836804 -84840744 + LTR8 LTR ERV1 1 691 0 1955 186 3 35 chr18 1836804 1836899 -84840649 + MLT1A1 LTR MaLR 269 365 0 873 179 0 52 chr18 1837380 1837553 -84839995 - AluJo SINE Alu -1 301 138 601 210 0 36 chr18 1837560 1837596 -84839952 - AluJo SINE Alu -179 133 97 2785 79 3 0 chr18 1837596 1837950 -84839598 - THE1A LTR MaLR 0 355 1 601 210 0 36 chr18 1837950 1838051 -84839497 - AluJo SINE Alu -215 97 1 425 322 61 17 chr18 1838144 1838324 -84839224 - L2 LINE L2 -5 3308 3121 2094 152 64 30 chr18 1838498 1839033 -84838515 + MLT2A2 LTR ERVL 2 554 0 951 251 132 35 chr18 1839109 1839509 -84838039 - MER34 LTR ERV1 -68 639 4 270 295 0 108 chr18 1839513 1839642 -84837906 - L2 LINE L2 0 3313 3199 780 223 14 51 chr18 1840410 1840625 -84836923 - MLT1B LTR MaLR 0 390 184 230 229 21 0 chr18 1840634 1840682 -84836866 + GA-rich Low_complexity Low_complexity 1 49 0 735 198 90 34 chr18 1840683 1840860 -84836688 - MLT1B LTR MaLR -187 187 1 21 0 0 0 chr18 1841221 1841242 -84836306 + AT_rich Low_complexity Low_complexity 1 21 0 450 238 58 2 chr18 1842116 1842265 -84835283 - MER5A DNA MER1_type -14 164 2 4351 145 7 17 chr18 1843024 1843742 -84833806 - MER50 LTR ERV1 -23 711 1 22 0 0 0 chr18 1843955 1843977 -84833571 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr18 1844262 1844291 -84833257 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr18 1844833 1844861 -84832687 + AT_rich Low_complexity Low_complexity 1 28 0 630 104 198 0 chr18 1844886 1844992 -84832556 - AluSp/q SINE Alu -19 294 168 1078 76 0 51 chr18 1845137 1845295 -84832253 - AluSp SINE Alu -163 150 1 28 0 0 26 chr18 1845510 1845522 -84832026 + AT_rich Low_complexity Low_complexity 1 12 -26 2983 12 0 0 chr18 1845522 1845860 -84831688 + L1PA3 LINE L1 5815 6152 -3 28 0 0 26 chr18 1845860 1845886 -84831662 + AT_rich Low_complexity Low_complexity 12 38 0 23 0 0 0 chr18 1845935 1845958 -84831590 + AT_rich Low_complexity Low_complexity 1 23 0 388 215 12 2 chr18 1845967 1846067 -84831481 + MER21B LTR ERV1 462 579 -26 358 316 88 10 chr18 1846410 1846603 -84830945 - MIR SINE MIR -8 254 47 22 56 0 0 chr18 1846820 1846856 -84830692 + AT_rich Low_complexity Low_complexity 1 36 0 1976 140 38 30 chr18 1847702 1848074 -84829474 - THE1C LTR MaLR 0 375 1 2469 161 3 5 chr18 1848256 1848735 -84828813 + L1MB2 LINE L1 5389 5867 -304 303 93 0 0 chr18 1851322 1851365 -84826183 + (CA)n Simple_repeat Simple_repeat 1 43 0 219 36 0 0 chr18 1851415 1851443 -84826105 + (CA)n Simple_repeat Simple_repeat 2 29 0 270 0 0 0 chr18 1851499 1851529 -84826019 + (CA)n Simple_repeat Simple_repeat 2 31 0 202 222 0 0 chr18 1852656 1852692 -84824856 + (TG)n Simple_repeat Simple_repeat 1 36 0 641 237 52 36 chr18 1853216 1853410 -84824138 + MIR SINE MIR 5 201 -61 34 42 0 0 chr18 1853417 1853465 -84824083 + AT_rich Low_complexity Low_complexity 1 48 0 180 281 53 0 chr18 1853465 1853522 -84824026 + MIR SINE MIR 193 252 -10 25 31 0 0 chr18 1853664 1853696 -84823852 + AT_rich Low_complexity Low_complexity 1 32 0 261 322 207 8 chr18 1855065 1855186 -84822362 - MER91A DNA MER1_type -47 149 5 226 167 71 0 chr18 1855445 1855487 -84822061 + MLT1E2 LTR MaLR 1 45 -460 1647 213 131 14 chr18 1855687 1856200 -84821348 + MLT1E2 LTR MaLR 54 626 0 1358 190 33 47 chr18 1856811 1857085 -84820463 - AluJo SINE Alu -14 298 29 26 0 0 0 chr18 1857577 1857603 -84819945 + AT_rich Low_complexity Low_complexity 1 26 0 244 70 0 0 chr18 1857603 1857646 -84819902 - L1PA2 LINE L1 0 6155 6113 695 101 0 0 chr18 1857646 1857745 -84819803 + L1PA3 LINE L1 5884 5982 -173 8544 233 52 41 chr18 1858397 1861273 -84816275 - L1PA16 LINE L1 0 6223 3378 819 147 0 0 chr18 1861273 1861389 -84816159 - AluJb SINE Alu -194 118 3 8544 233 52 41 chr18 1861389 1862123 -84815425 - L1PA16 LINE L1 -2845 3378 2653 2094 129 0 13 chr18 1862123 1862433 -84815115 - AluSx SINE Alu -6 306 1 8544 233 52 41 chr18 1862433 1864075 -84813473 - L1PA16 LINE L1 -3570 2653 711 258 302 12 23 chr18 1864648 1864734 -84812814 - L1PA16 LINE L1 -5999 205 121 422 392 80 32 chr18 1864902 1865400 -84812148 - L1M2 LINE L1 -6318 531 10 1966 181 99 14 chr18 1865747 1866173 -84811375 - MLT2C2 LTR ERVL 0 464 3 3058 191 30 8 chr18 1866174 1866781 -84810767 - ERVL-C2 LTR ERVL -7 5757 5138 21 0 0 0 chr18 1867137 1867158 -84810390 + AT_rich Low_complexity Low_complexity 1 21 0 1770 183 0 0 chr18 1867863 1868136 -84809412 + AluSx SINE Alu 1 273 -39 21 0 0 0 chr18 1869467 1869488 -84808060 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr18 1869835 1869857 -84807691 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 33 85 0 0 chr18 1870290 1870372 -84807176 + AT_rich Low_complexity Low_complexity 1 82 0 230 428 14 0 chr18 1870653 1870798 -84806750 + MIR SINE MIR 6 152 -110 288 213 16 0 chr18 1870825 1870886 -84806662 - MER94 DNA DNA -68 66 5 216 0 0 0 chr18 1871104 1871128 -84806420 + (T)n Simple_repeat Simple_repeat 1 24 0 319 341 8 8 chr18 1871492 1871624 -84805924 + MLT1I LTR MaLR 278 409 0 328 48 95 0 chr18 1872151 1872235 -84805313 + (TA)n Simple_repeat Simple_repeat 2 93 0 503 279 122 35 chr18 1872448 1872645 -84804903 - MLT1I LTR MaLR -19 390 177 243 361 28 7 chr18 1873470 1873614 -84803934 + MLT1I LTR MaLR 217 363 -46 1963 170 55 39 chr18 1875258 1875631 -84801917 + MLT2A2 LTR ERVL 1 379 -175 2277 96 0 3 chr18 1875631 1875934 -84801614 - AluSg SINE Alu -8 302 1 1963 170 55 39 chr18 1875934 1876108 -84801440 + MLT2A2 LTR ERVL 379 549 -5 7159 210 92 103 chr18 1876131 1876364 -84801184 - L1 LINE L1 -3706 3142 2908 2315 76 13 0 chr18 1876364 1876667 -84800881 - AluY SINE Alu -4 307 1 7159 210 92 103 chr18 1876667 1879437 -84798111 - L1 LINE L1 -3940 2908 172 2585 139 31 5 chr18 1881297 1881714 -84795834 - MSTA LTR MaLR 0 428 1 306 87 0 0 chr18 1882943 1882989 -84794559 + (CA)n Simple_repeat Simple_repeat 1 46 0 870 62 0 0 chr18 1883157 1883270 -84794278 + (TA)n Simple_repeat Simple_repeat 2 114 0 42867 32 20 4 chr18 1883637 1889688 -84787860 - L1PA2 LINE L1 -4 6151 1 382 329 70 19 chr18 1890356 1890775 -84786773 + L1ME LINE L1 5258 5697 -473 227 284 93 36 chr18 1890800 1890994 -84786554 + L1ME LINE L1 5681 5885 -277 599 211 33 83 chr18 1891045 1891225 -84786323 - MLT1E3 LTR MaLR -390 234 64 595 251 64 39 chr18 1891225 1891248 -84786300 - MLT2C1 LTR ERVL -170 227 20 195 286 16 32 chr18 1891386 1891449 -84786099 + L2 LINE L2 3211 3272 0 673 259 106 62 chr18 1891765 1892039 -84785509 - MLT1I LTR MaLR -3 406 121 503 299 154 5 chr18 1892285 1892499 -84785049 + MIR SINE MIR 3 248 -14 563 271 0 0 chr18 1894724 1894846 -84782702 + FLAM_A SINE Alu 1 122 -11 259 364 8 16 chr18 1895855 1895976 -84781572 - MER5A DNA MER1_type -69 120 1 500 247 7 0 chr18 1896027 1896181 -84781367 + (TG)n Simple_repeat Simple_repeat 2 156 0 627 282 89 66 chr18 1896238 1896586 -84780962 - L2 LINE L2 0 3313 2958 998 290 156 14 chr18 1896624 1897066 -84780482 - L2 LINE L2 -430 2884 2380 2319 183 178 5 chr18 1897216 1897767 -84779781 + L1PA16 LINE L1 4026 4671 -1475 5278 142 33 1 chr18 1897775 1898651 -84778897 + L1PA16 LINE L1 5254 6157 -9 299 309 217 17 chr18 1898862 1899037 -84778511 - MIR SINE MIR -4 258 49 235 150 75 25 chr18 1900888 1900968 -84776580 + (TTATA)n Simple_repeat Simple_repeat 3 86 0 2349 65 0 32 chr18 1901130 1901261 -84776287 + AluY SINE Alu 1 135 -176 7505 31 7 0 chr18 1901261 1902890 -84774658 + L1PA3 LINE L1 4521 6155 0 2349 65 0 32 chr18 1902890 1903068 -84774480 + AluY SINE Alu 135 300 -11 1080 236 73 17 chr18 1903164 1903763 -84773785 - L1ME LINE L1 -465 5699 4983 268 343 28 51 chr18 1904098 1904276 -84773272 + MIR3 SINE MIR 28 201 -7 2579 55 0 0 chr18 1904375 1904682 -84772866 - AluY SINE Alu -4 307 1 2855 138 6 43 chr18 1904800 1905271 -84772277 - L1M2 LINE L1 -474 5817 5365 1599 68 5 0 chr18 1905271 1905478 -84772070 - L1PA8 LINE L1 0 6172 5965 2855 138 6 43 chr18 1905478 1905513 -84772035 - L1M2 LINE L1 -926 5365 5330 1976 186 32 17 chr18 1905505 1905914 -84771634 - L1M3e LINE L1 -6615 415 1 * 2575 37 0 0 chr18 1908387 1908687 -84768861 - AluY SINE Alu -11 300 1 813 155 11 55 chr18 1908938 1909119 -84768429 - AluJb SINE Alu -4 308 136 491 81 0 14 chr18 1910051 1910125 -84767423 + (TCCCC)n Simple_repeat Simple_repeat 3 75 0 212 133 0 0 chr18 1910126 1910156 -84767392 + (TC)n Simple_repeat Simple_repeat 1 30 0 1806 101 105 4 chr18 1910160 1910427 -84767121 + AluSx SINE Alu 3 296 -16 767 186 26 26 chr18 1910427 1910583 -84766965 - AluJo SINE Alu -32 280 125 2383 189 25 36 chr18 1911507 1911982 -84765566 - MER70A LTR ERVL 0 472 3 666 320 27 8 chr18 1912421 1912677 -84764871 + MIR SINE MIR 2 262 0 958 281 129 59 chr18 1912780 1913268 -84764280 + MLT1G1 LTR MaLR 73 594 -1 259 313 0 0 chr18 1913493 1913576 -84763972 + (TA)n Simple_repeat Simple_repeat 1 83 0 29 60 0 0 chr18 1914329 1914379 -84763169 + AT_rich Low_complexity Low_complexity 1 50 0 445 309 58 25 chr18 1915847 1916125 -84761423 + L1ME3A LINE L1 3340 3626 -2520 1936 269 81 57 chr18 1916156 1916269 -84761279 + L1ME3A LINE L1 3846 3955 -2215 1830 138 176 27 chr18 1916269 1916639 -84760909 + MSTA LTR MaLR 4 428 0 8855 147 10 54 chr18 1916641 1918292 -84759256 + MSTA-int LTR MaLR 3 1580 0 2170 128 112 20 chr18 1918292 1918684 -84758864 + MSTA LTR MaLR 1 428 0 1936 269 81 57 chr18 1918684 1919253 -84758295 + L1ME3A LINE L1 3955 4509 -1661 2040 134 0 0 chr18 1919253 1919552 -84757996 - AluSg1 SINE Alu -10 299 1 1936 269 81 57 chr18 1919552 1920850 -84756698 + L1ME3A LINE L1 4509 5881 -289 314 261 68 31 chr18 1920875 1921036 -84756512 + L1ME3A LINE L1 5972 6138 -32 25 31 0 0 chr18 1921094 1921126 -84756422 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr18 1921838 1921859 -84755689 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr18 1921952 1921990 -84755558 + AT_rich Low_complexity Low_complexity 1 38 0 31 44 0 0 chr18 1922128 1922173 -84755375 + AT_rich Low_complexity Low_complexity 1 45 0 23 33 0 0 chr18 1922231 1922261 -84755287 + AT_rich Low_complexity Low_complexity 1 30 0 11377 213 33 20 chr18 1922276 1925240 -84752308 - L1PA16 LINE L1 -124 6099 3070 1873 167 0 10 chr18 1925240 1925539 -84752009 - AluJb SINE Alu -16 296 1 11377 213 33 20 chr18 1925539 1926365 -84751183 - L1PA16 LINE L1 -3153 3070 2256 735 289 82 48 chr18 1926361 1926428 -84751120 - L1PA16 LINE L1 -4994 1209 1146 * 2112 90 17 0 chr18 1926428 1926727 -84750821 - AluSc SINE Alu -5 304 1 735 289 82 48 chr18 1926727 1927347 -84750201 - L1PA16 LINE L1 -5057 1146 395 363 339 101 74 chr18 1927918 1928434 -84749114 - L1M2 LINE L1 -6309 540 11 250 269 32 32 chr18 1928612 1928705 -84748843 + HERVL68 LTR ERVL 2618 2710 -327 1852 156 3 86 chr18 1928974 1929358 -84748190 + MLT1A1 LTR MaLR 12 363 -2 392 371 4 8 chr18 1929364 1929604 -84747944 + MER89-int LTR ERV1 6205 6443 -358 998 273 13 0 chr18 1929620 1929858 -84747690 + HERVL68 LTR ERVL 5287 5527 -3 374 248 80 40 chr18 1929860 1929985 -84747563 + LTR40a LTR ERVL 1 130 -389 654 292 101 25 chr18 1930067 1930433 -84747115 + LTR40a LTR ERVL 122 515 -4 717 194 45 28 chr18 1930442 1930689 -84746859 - L1MEc LINE L1 -3694 2846 2596 443 319 77 19 chr18 1930693 1931003 -84746545 - L1MEc LINE L1 -4177 2544 2217 769 290 57 52 chr18 1931109 1931729 -84745819 - L1MEc LINE L1 -4561 1979 1357 2017 191 54 7 chr18 1932290 1932699 -84744849 + MSTB1 LTR MaLR 5 432 0 192 247 153 24 chr18 1933111 1933196 -84744352 + MIR SINE MIR 92 187 -75 529 313 58 82 chr18 1934203 1934494 -84743054 + L2 LINE L2 2985 3268 -4 1779 203 116 138 chr18 1935062 1935383 -84742165 - MER63C DNA MER1_type -130 930 603 1745 187 3 0 chr18 1935383 1935688 -84741860 - AluJb SINE Alu -6 306 1 1779 203 116 138 chr18 1935688 1936317 -84741231 - MER63C DNA MER1_type -457 603 1 359 193 12 0 chr18 1936455 1936538 -84741010 + (TG)n Simple_repeat Simple_repeat 1 84 0 1139 261 46 42 chr18 1936540 1936996 -84740552 - L1ME3 LINE L1 -7 6155 5698 417 302 111 25 chr18 1938621 1939023 -84738525 - L2 LINE L2 0 3313 2155 353 245 0 19 chr18 1939365 1939471 -84738077 - L1MC4 LINE L1 -31 8011 7908 384 135 22 11 chr18 1939471 1939560 -84737988 + (TCTA)n Simple_repeat Simple_repeat 2 91 0 2011 253 72 33 chr18 1939589 1940408 -84737140 + L1MC4 LINE L1 6875 7725 -317 24 32 0 0 chr18 1940709 1940740 -84736808 + AT_rich Low_complexity Low_complexity 1 31 0 390 332 21 12 chr18 1940837 1941004 -84736544 - MIR SINE MIR -60 148 30 3567 172 81 19 chr18 1941159 1941896 -84735652 + LTR39 LTR ERV1 1 783 0 204 324 0 40 chr18 1942035 1942109 -84735439 + L2 LINE L2 3198 3268 -4 839 211 31 52 chr18 1943627 1943821 -84733727 + MER58A DNA MER1_type 34 223 -1 459 0 0 0 chr18 1943882 1943933 -84733615 + (CA)n Simple_repeat Simple_repeat 1 51 0 436 305 63 5 chr18 1944311 1944501 -84733047 + MLT1J2 LTR MaLR 34 234 -216 299 299 46 0 chr18 1944552 1944639 -84732909 + MLT1I LTR MaLR 319 409 0 235 305 0 0 chr18 1945084 1945166 -84732382 - L1M4 LINE L1 -2113 4102 4021 1953 144 7 0 chr18 1945246 1945544 -84732004 - AluJb SINE Alu -12 300 1 204 343 93 29 chr18 1945624 1945764 -84731784 + L2 LINE L2 3161 3309 -4 1918 153 85 15 chr18 1945934 1946334 -84731214 + MSTA LTR MaLR 1 428 0 238 352 11 11 chr18 1948842 1948930 -84728618 + MIR3 SINE MIR 67 154 -54 2019 243 108 8 chr18 1949080 1949673 -84727875 - MLT1E1 LTR MaLR 0 654 3 274 330 51 95 chr18 1950159 1950453 -84727095 - L2 LINE L2 0 3272 2992 298 324 175 31 chr18 1950822 1951358 -84726190 + L2 LINE L2 2715 3313 0 212 286 86 0 chr18 1952788 1952858 -84724690 - L2 LINE L2 -15 3298 3223 296 232 71 61 chr18 1953225 1953389 -84724159 - MIR SINE MIR -62 200 41 1914 139 0 3 chr18 1955605 1955908 -84721640 - AluSg SINE Alu -8 302 1 2152 131 0 3 chr18 1956506 1956819 -84720729 + AluSx SINE Alu 1 312 0 238 290 109 22 chr18 1956931 1957069 -84720479 - L1MC4 LINE L1 -112 7930 7781 556 260 74 7 chr18 1957103 1957283 -84720265 - L1ME3 LINE L1 -136 6028 5833 1203 280 82 5 chr18 1957379 1957747 -84719801 + MLT1G LTR MaLR 192 587 -3 2321 274 17 30 chr18 1957754 1958736 -84718812 - L1MEc LINE L1 -3185 3030 2096 2410 195 33 25 chr18 1958928 1959697 -84717851 + L1MC/D LINE L1 4978 5761 -583 927 204 20 59 chr18 1959719 1959974 -84717574 - L1MB3 LINE L1 -478 5705 5461 2347 158 16 49 chr18 1959975 1960469 -84717079 + L1MB3 LINE L1 5704 6181 -2 235 89 244 0 chr18 1960484 1960529 -84717019 + L1MC/D LINE L1 5826 5881 -463 313 259 44 37 chr18 1960582 1960626 -84716922 - L1MA9 LINE L1 0 6312 6269 2192 252 46 40 chr18 1960626 1961272 -84716276 - L1ME1 LINE L1 -44 6105 5453 459 0 0 0 chr18 1961272 1961323 -84716225 + (TG)n Simple_repeat Simple_repeat 2 52 0 2192 252 46 40 chr18 1961323 1961559 -84715989 - L1ME1 LINE L1 -696 5453 5220 323 155 48 0 chr18 1961577 1961661 -84715887 + (TA)n Simple_repeat Simple_repeat 2 89 0 394 219 116 45 chr18 1961714 1961869 -84715679 - L1ME1 LINE L1 -901 5228 5063 738 235 25 39 chr18 1961893 1962097 -84715451 - L1ME1 LINE L1 -1163 4966 4766 855 296 46 7 chr18 1963606 1963913 -84713635 + MER110 LTR ERV1 166 484 -7 273 286 0 0 chr18 1964020 1964097 -84713451 - L1ME1 LINE L1 -5084 1035 959 527 367 24 0 chr18 1964380 1964587 -84712961 - LTR16B LTR ERVL -245 219 8 21 0 0 0 chr18 1965916 1965937 -84711611 + AT_rich Low_complexity Low_complexity 1 21 0 2210 90 0 10 chr18 1965984 1966306 -84711242 + AluY SINE Alu 1 311 0 196 286 36 80 chr18 1968202 1968314 -84709234 - MIR3 SINE MIR -7 201 95 385 229 74 82 chr18 1968438 1968560 -84708988 - L2 LINE L2 0 3313 3193 297 75 0 0 chr18 1968615 1968655 -84708893 + (TG)n Simple_repeat Simple_repeat 1 40 0 654 360 99 26 chr18 1968777 1969474 -84708074 - L2 LINE L2 -339 2975 2228 2164 115 0 3 chr18 1970918 1971230 -84706318 - AluSx SINE Alu 0 312 2 364 209 33 0 chr18 1971282 1971373 -84706175 + LTR37B LTR ERV1 224 317 -151 977 255 91 68 chr18 1972076 1972605 -84704943 + MLT1F LTR MaLR 1 541 -1 25 31 0 0 chr18 1972908 1972940 -84704608 + AT_rich Low_complexity Low_complexity 1 32 0 252 0 0 0 chr18 1973486 1973514 -84704034 + (TG)n Simple_repeat Simple_repeat 2 29 0 1408 211 7 7 chr18 1973514 1973799 -84703749 - AluJo SINE Alu -27 285 1 362 257 114 89 chr18 1974162 1974645 -84702903 + MER31-int LTR ERV1 2408 2902 -2034 7384 92 0 45 chr18 1975476 1976455 -84701093 - L1P LINE L1 -1262 4884 3962 1781 97 0 4 chr18 1976455 1976703 -84700845 - L1PA7 LINE L1 0 6154 5908 7384 92 0 45 chr18 1976703 1976862 -84700686 - L1P LINE L1 -2184 3962 3797 27 0 0 0 chr18 1976864 1976891 -84700657 + AT_rich Low_complexity Low_complexity 1 27 0 424 286 62 54 chr18 1977195 1977436 -84700112 + MER31-int LTR ERV1 3818 4060 -876 237 259 42 77 chr18 1977682 1977801 -84699747 + LTR37B LTR ERV1 154 269 -199 2684 133 14 5 chr18 1977801 1978231 -84699317 - MER57B LTR ERV1 0 434 1 237 259 42 77 chr18 1978231 1978254 -84699294 + LTR37B LTR ERV1 269 291 -177 633 102 0 20 chr18 1978788 1978886 -84698662 + MER4A LTR ERV1 3 98 -566 1900 105 158 75 chr18 1978886 1979259 -84698289 + MER4A LTR ERV1 261 664 0 24 32 0 0 chr18 1980690 1980721 -84696827 + AT_rich Low_complexity Low_complexity 1 31 0 217 96 0 58 chr18 1980870 1980922 -84696626 + (TTTTTG)n Simple_repeat Simple_repeat 4 52 0 902 264 5 5 chr18 1981013 1981221 -84696327 + MER58A DNA MER1_type 1 208 -16 3776 250 56 37 chr18 1981554 1982416 -84695132 + L1MB5 LINE L1 37 881 -5763 468 0 0 0 chr18 1982416 1982468 -84695080 + (CA)n Simple_repeat Simple_repeat 2 53 0 3776 250 56 37 chr18 1982468 1984796 -84692752 + L1MB5 LINE L1 881 3409 -3235 1038 208 91 26 chr18 1984811 1985056 -84692492 + L1MB5 LINE L1 5211 5481 -1163 2372 151 14 48 chr18 1985056 1985539 -84692009 + L1MB5 LINE L1 6206 6672 0 1038 208 91 26 chr18 1985539 1985601 -84691947 + L1MB5 LINE L1 5481 5538 -1106 1189 260 51 83 chr18 1985658 1986248 -84691300 - L2 LINE L2 0 3313 2740 2720 148 24 21 chr18 1986621 1987203 -84690345 - MER41B LTR ERV1 0 554 1 27 0 0 0 chr18 1987279 1987306 -84690242 + AT_rich Low_complexity Low_complexity 1 27 0 9964 196 50 18 chr18 1988492 1990774 -84686774 + L1MC3 LINE L1 5422 7777 -8 241 257 38 48 chr18 1990872 1990977 -84686571 - Charlie7 DNA MER1_type -1929 683 580 425 187 233 36 chr18 1990991 1991210 -84686338 - L1MDa LINE L1 -1422 5118 4857 889 223 49 23 chr18 1991214 1991519 -84686029 - L1M4 LINE L1 -895 5251 4939 2206 283 114 29 chr18 1991550 1993105 -84684443 - L1MDa LINE L1 -2296 4244 2558 2041 133 0 7 chr18 1993123 1993425 -84684123 - AluSx SINE Alu -12 300 1 415 264 36 0 chr18 1993509 1993649 -84683899 - L1MDa LINE L1 -4274 2447 2303 669 200 15 7 chr18 1993665 1993800 -84683748 - AluJo SINE Alu -176 136 1 434 296 82 18 chr18 1993800 1994242 -84683306 - L1MDa LINE L1 -4410 2311 1787 829 317 60 50 chr18 1994353 1995220 -84682328 + L1MEc LINE L1 100 975 -5421 1709 227 54 13 chr18 1995373 1995836 -84681712 - L1MB8 LINE L1 -3 6175 5694 678 62 0 10 chr18 1995852 1995948 -84681600 - L1MA2 LINE L1 0 6304 6210 2471 225 37 32 chr18 1995949 1996625 -84680923 + L1MA5A LINE L1 3544 4222 -1924 351 242 0 42 chr18 1996646 1996741 -84680807 + L1MC4 LINE L1 6613 6703 -1339 351 233 33 22 chr18 1996778 1996868 -84680680 + L1MC4 LINE L1 6613 6703 -1339 261 269 0 0 chr18 1996870 1996937 -84680611 + (TA)n Simple_repeat Simple_repeat 2 68 0 358 286 38 0 chr18 1996937 1997042 -84680506 + L1MC4 LINE L1 6595 6703 -1339 345 257 0 0 chr18 1997044 1997180 -84680368 + (TA)n Simple_repeat Simple_repeat 2 137 0 4704 200 23 37 chr18 1997180 1999172 -84678376 + L1MA5A LINE L1 4217 6188 -109 1076 227 58 32 chr18 1999178 1999610 -84677938 + L1M4 LINE L1 4175 4617 -1529 * 7685 21 0 0 chr18 1999601 2000505 -84677043 - L1PA2 LINE L1 -1107 5039 4136 7618 21 0 10 chr18 2000505 2001630 -84675918 + L1PA2 LINE L1 5037 6152 -3 1572 149 17 10 chr18 2001630 2001925 -84675623 - L1MA3 LINE L1 -85 6220 5924 1593 219 35 32 chr18 2001931 2002423 -84675125 + L1M4 LINE L1 4600 5092 -1054 23 0 0 0 chr18 2002445 2002468 -84675080 + AT_rich Low_complexity Low_complexity 1 23 0 736 207 22 40 chr18 2003044 2003266 -84674282 - L1MB8 LINE L1 -33 6145 5928 2819 40 8 34 chr18 2003267 2003598 -84673950 - L1PA7 LINE L1 -1 6153 5832 2540 30 0 3 chr18 2003598 2003896 -84673652 - AluY SINE Alu -14 297 1 2819 40 8 34 chr18 2003896 2003943 -84673605 - L1PA7 LINE L1 -322 5832 5785 901 181 83 9 chr18 2003943 2004165 -84673383 + L1M4 LINE L1 5121 5354 -798 417 223 46 16 chr18 2004167 2004307 -84673241 + L1MA10 LINE L1 5964 6276 -53 27 49 0 0 chr18 2005560 2005601 -84671947 + AT_rich Low_complexity Low_complexity 1 41 0 301 333 10 10 chr18 2006104 2006206 -84671342 - MER5A DNA MER1_type -50 139 38 3081 180 15 30 chr18 2006995 2007656 -84669892 + L1P LINE L1 1911 2561 -3585 229 302 13 12 chr18 2007656 2007755 -84669793 + CT-rich Low_complexity Low_complexity 1 159 0 220 288 197 0 chr18 2008013 2008079 -84669469 + L2 LINE L2 3169 3247 -25 23463 39 2 1 chr18 2008624 2012299 -84665249 - L1PA4 LINE L1 -1 6154 2479 6944 54 24 3 chr18 2012296 2013935 -84663613 + L1PA5 LINE L1 4509 6164 0 * 194 216 0 0 chr18 2014168 2014205 -84663343 + L2 LINE L2 3234 3270 -2 184 372 107 0 chr18 2014236 2014357 -84663191 + L2 LINE L2 3180 3313 0 239 220 0 17 chr18 2014468 2014527 -84663021 - LTR66 LTR ERVL -163 447 390 485 295 123 22 chr18 2015092 2015319 -84662229 + MIR SINE MIR 13 262 0 2205 101 3 7 chr18 2015582 2015890 -84661658 - AluSc SINE Alu 0 309 3 2717 105 35 5 chr18 2016885 2017286 -84660262 + MLT2A2 LTR ERVL 1 413 -40 216 0 0 0 chr18 2017286 2017310 -84660238 + (TA)n Simple_repeat Simple_repeat 2 25 0 399 91 0 0 chr18 2017327 2017382 -84660166 + MLT2A2 LTR ERVL 399 453 0 485 333 5 38 chr18 2017733 2017919 -84659629 + MER5A DNA MER1_type 1 180 -9 2203 183 14 28 chr18 2020329 2020760 -84656788 + MER67A LTR ERV1 119 543 0 297 75 0 0 chr18 2021067 2021107 -84656441 + (TG)n Simple_repeat Simple_repeat 2 41 0 297 89 0 0 chr18 2021109 2021154 -84656394 + (GA)n Simple_repeat Simple_repeat 1 45 0 1780 342 91 25 chr18 2022339 2023857 -84653691 - L2 LINE L2 -255 3058 1434 514 233 7 14 chr18 2023862 2024008 -84653540 - L1MA9 LINE L1 -253 6059 5915 704 217 40 6 chr18 2024017 2024192 -84653356 + L1MA9 LINE L1 6094 6274 -38 897 353 122 10 chr18 2024213 2024814 -84652734 - L2 LINE L2 -1884 1430 763 587 241 8 15 chr18 2024832 2024965 -84652583 - L2 LINE L2 0 3313 3182 27 29 0 0 chr18 2025002 2025036 -84652512 + AT_rich Low_complexity Low_complexity 1 34 0 481 342 50 58 chr18 2025103 2025483 -84652065 - L2 LINE L2 -461 2853 2477 2350 89 3 0 chr18 2025746 2026048 -84651500 - AluSp SINE Alu -10 303 1 696 353 47 25 chr18 2026533 2027021 -84650527 - L2 LINE L2 -2560 754 256 260 303 61 53 chr18 2027022 2027154 -84650394 - MIR SINE MIR -108 154 22 417 317 126 56 chr18 2027958 2028640 -84648908 + HAL1 LINE L1 247 976 -1531 615 281 66 34 chr18 2028691 2029101 -84648447 + HAL1 LINE L1 1053 1475 -1032 422 276 17 0 chr18 2029191 2029307 -84648241 + MIR SINE MIR 83 200 -62 308 301 98 0 chr18 2029417 2029600 -84647948 + L1ME4a LINE L1 5714 5914 -207 303 301 114 42 chr18 2032127 2032320 -84645228 + MIR SINE MIR 53 259 -3 321 282 128 24 chr18 2034432 2034829 -84642719 - L1MC/D LINE L1 -624 5546 5199 313 239 115 76 chr18 2035129 2035414 -84642134 - MLT1J2 LTR MaLR -182 367 60 27 0 0 0 chr18 2036156 2036183 -84641365 + AT_rich Low_complexity Low_complexity 1 27 0 231 218 0 0 chr18 2036237 2036292 -84641256 + (TATATG)n Simple_repeat Simple_repeat 2 56 0 231 375 42 68 chr18 2037374 2037685 -84639863 - L2 LINE L2 -248 3024 2727 30 0 0 0 chr18 2038439 2038469 -84639079 + AT_rich Low_complexity Low_complexity 1 30 0 26 30 0 0 chr18 2039179 2039212 -84638336 + AT_rich Low_complexity Low_complexity 1 33 0 256 342 37 42 chr18 2039331 2039390 -84638158 + L1M4 LINE L1 2131 2189 -3957 1210 79 6 0 chr18 2039390 2039555 -84637993 - L1PA7 LINE L1 0 6154 5989 256 342 37 42 chr18 2039555 2039878 -84637670 + L1M4 LINE L1 2189 2511 -3635 * 4303 194 21 16 chr18 2039869 2041090 -84636458 + L1MB7 LINE L1 4948 6174 -10 288 298 151 9 chr18 2041250 2041468 -84636080 + L1M4 LINE L1 2690 2938 -3208 506 153 12 0 chr18 2041468 2041553 -84635995 + AluJ/FLAM SINE Alu 3 88 -224 354 239 155 44 chr18 2041555 2041781 -84635767 + L1M4 LINE L1 2930 3180 -2966 1606 108 16 0 chr18 2041866 2042117 -84635431 + L1MA5A LINE L1 6040 6294 -3 23 0 0 0 chr18 2042207 2042230 -84635318 + AT_rich Low_complexity Low_complexity 1 23 0 510 275 171 8 chr18 2042400 2042640 -84634908 - L2 LINE L2 -1638 1676 1398 569 145 22 109 chr18 2042731 2042869 -84634679 + FLAM_C SINE Alu 1 126 -17 360 0 0 0 chr18 2042871 2042911 -84634637 + (TA)n Simple_repeat Simple_repeat 2 41 0 33 0 0 0 chr18 2043079 2043112 -84634436 + AT_rich Low_complexity Low_complexity 1 33 0 661 168 0 0 chr18 2043232 2043345 -84634203 - AluSx SINE Alu -1 308 196 1190 75 0 0 chr18 2043349 2043495 -84634053 - AluSx SINE Alu -167 146 1 297 324 71 22 chr18 2043806 2043988 -84633560 - MLT2E LTR ERVL -407 221 31 225 0 0 0 chr18 2044924 2044949 -84632599 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 456 224 0 0 chr18 2044971 2045069 -84632479 + L1PA16 LINE L1 6063 6160 -6 1047 202 48 60 chr18 2045076 2045407 -84632141 - MER39 LTR ERV1 -62 645 319 2042 120 0 29 chr18 2045461 2045769 -84631779 + AluSx SINE Alu 1 299 -13 287 241 214 36 chr18 2045979 2046091 -84631457 - MER34 LTR ERV1 -410 132 1 187 375 11 23 chr18 2046091 2046179 -84631369 + L2 LINE L2 2997 3083 -189 1298 213 52 14 chr18 2046362 2046779 -84630769 - MLT1D LTR MaLR -9 496 25 24 0 0 0 chr18 2047615 2047639 -84629909 + AT_rich Low_complexity Low_complexity 1 24 0 295 314 52 13 chr18 2048212 2048417 -84629131 + L1 LINE L1 4067 4280 -1866 3277 153 81 55 chr18 2050353 2050438 -84627110 + L1MA7 LINE L1 5533 5614 -677 2043 117 3 0 chr18 2050438 2050721 -84626827 + AluSx SINE Alu 2 285 -27 3277 153 81 55 chr18 2050721 2051366 -84626182 + L1MA7 LINE L1 5614 6282 -9 225 162 0 0 chr18 2051448 2051485 -84626063 - L1M2 LINE L1 -446 5845 5809 2153 169 33 0 chr18 2052528 2052918 -84624630 - MER57A LTR ERV1 0 403 1 1699 118 20 4 chr18 2052918 2053173 -84624375 - MER57A-int LTR ERV1 0 7537 7279 476 145 137 34 chr18 2053173 2053290 -84624258 - LTR54B LTR ERV1 -367 131 3 16992 137 34 28 chr18 2053294 2055798 -84621750 - MER57A-int LTR ERV1 -394 7143 4655 1675 149 100 26 chr18 2055798 2056147 -84621401 + THE1C LTR MaLR 1 375 0 16992 137 34 28 chr18 2056147 2057071 -84620477 - MER57A-int LTR ERV1 -2882 4655 1707 577 174 0 203 chr18 2057174 2057415 -84620133 - MER57A-int LTR ERV1 -2890 3441 3250 270 214 0 29 chr18 2057592 2057662 -84619886 - MER57A-int LTR ERV1 -3681 1190 1123 2078 165 49 35 chr18 2057662 2058210 -84619338 + MLT2A2 LTR ERVL 1 554 0 385 148 0 0 chr18 2058443 2058504 -84619044 - MER34C LTR ERV1 -370 215 155 1319 150 23 10 chr18 2058739 2059072 -84618476 - MER57A-int LTR ERV1 -6695 842 444 * 1549 177 20 0 chr18 2059067 2059321 -84618227 - MER57A-int LTR ERV1 -7277 260 2 185 83 28 0 chr18 2059329 2059365 -84618183 + (TAAAA)n Simple_repeat Simple_repeat 1 37 0 2074 166 31 31 chr18 2059366 2059758 -84617790 - MER57A LTR ERV1 -11 392 1 300 295 104 22 chr18 2059963 2060146 -84617402 - MIR SINE MIR 0 262 65 7372 223 74 50 chr18 2060589 2061721 -84615827 - L1MC3 LINE L1 -153 8050 6947 1556 138 78 40 chr18 2061721 2062068 -84615480 - MER46B DNA MER2_type 0 236 2 7372 223 74 50 chr18 2062068 2063087 -84614461 - L1MC3 LINE L1 -1256 6947 5954 1436 220 0 7 chr18 2063087 2063399 -84614149 - AluJo SINE Alu 0 310 1 7372 223 74 50 chr18 2063399 2066958 -84610590 - L1MC3 LINE L1 -2249 5954 2196 1169 282 55 17 chr18 2066968 2067387 -84610161 - L1MC3 LINE L1 -5042 1003 569 28150 123 69 14 chr18 2067421 2073256 -84604292 + L1PA8 LINE L1 10 6171 -1 1481 262 67 38 chr18 2073378 2073932 -84603616 - L1MC3 LINE L1 -5475 570 1 2021 128 16 0 chr18 2076487 2076792 -84600756 + AluSx SINE Alu 2 311 -1 264 291 26 17 chr18 2077138 2077255 -84600293 - HAL1 LINE L1 -788 1719 1602 468 336 84 8 chr18 2077499 2077737 -84599811 + MIR SINE MIR 6 261 -1 182 118 29 0 chr18 2077802 2077836 -84599712 + CT-rich Low_complexity Low_complexity 3 37 0 2940 185 40 12 chr18 2078803 2079398 -84598150 + L1MB8 LINE L1 5409 6020 -158 447 226 0 0 chr18 2079400 2079515 -84598033 + L1MB8 LINE L1 6064 6178 0 228 314 50 33 chr18 2080063 2080184 -84597364 + L2 LINE L2 3191 3313 0 401 318 9 0 chr18 2081247 2081357 -84596191 - L2 LINE L2 0 3313 3203 320 380 39 0 chr18 2081437 2081566 -84595982 - MIR3 SINE MIR -15 193 60 22 0 0 0 chr18 2082535 2082557 -84594991 + AT_rich Low_complexity Low_complexity 1 22 0 694 299 35 0 chr18 2083234 2083518 -84594030 - L1M4 LINE L1 -2208 3938 3645 773 254 5 23 chr18 2083518 2083735 -84593813 - L1MD3 LINE L1 -1019 6976 6764 524 190 0 0 chr18 2083735 2083856 -84593692 + Tigger7 DNA MER2_type 2274 2394 -93 809 86 0 0 chr18 2083856 2083961 -84593587 - AluSq/x SINE Alu -208 105 1 241 260 0 0 chr18 2083961 2084011 -84593537 - L1MC/D LINE L1 -799 5534 5485 * 1153 220 10 23 chr18 2084003 2084303 -84593245 + L1MC2 LINE L1 5603 5898 -446 1306 132 19 0 chr18 2084309 2084514 -84593034 + MER2 DNA MER2_type 1 209 -136 29 47 0 0 chr18 2084527 2084570 -84592978 + AT_rich Low_complexity Low_complexity 1 43 0 2197 159 30 18 chr18 2084609 2085048 -84592500 + L1MC2 LINE L1 5901 6344 0 306 171 13 79 chr18 2085710 2085786 -84591762 + Tigger5 DNA MER2_type 2252 2322 -1 310 242 0 0 chr18 2085851 2085913 -84591635 + Tigger5 DNA MER2_type 2262 2323 0 1758 162 7 3 chr18 2086045 2086335 -84591213 + AluJb SINE Alu 1 291 -21 918 263 71 52 chr18 2086339 2086872 -84590676 - L1ME LINE L1 -340 5822 5280 209 161 32 32 chr18 2087315 2087470 -84590078 + (TA)n Simple_repeat Simple_repeat 1 155 0 44 56 0 0 chr18 2087476 2087548 -84590000 + AT_rich Low_complexity Low_complexity 1 72 0 533 102 72 6 chr18 2087548 2087715 -84589833 + (TA)n Simple_repeat Simple_repeat 2 179 0 383 104 97 32 chr18 2087726 2087880 -84589668 + (TTATA)n Simple_repeat Simple_repeat 1 164 0 368 233 29 46 chr18 2087891 2088614 -84588934 + (TATAA)n Simple_repeat Simple_repeat 1 710 0 316 165 71 29 chr18 2088531 2088701 -84588847 + (TA)n Simple_repeat Simple_repeat 1 177 0 * 337 105 29 58 chr18 2088725 2088897 -84588651 + (TATAA)n Simple_repeat Simple_repeat 3 169 0 194 177 0 48 chr18 2089523 2089585 -84587963 + T-rich Low_complexity Low_complexity 1 59 0 6254 86 7 15 chr18 2090116 2091959 -84585589 - L1PA11 LINE L1 -1 6173 4342 22 99 0 0 chr18 2092070 2092141 -84585407 + AT_rich Low_complexity Low_complexity 1 71 0 478 303 23 9 chr18 2092150 2092368 -84585180 - L1MCc LINE L1 -4916 1507 1287 239 264 254 9 chr18 2092928 2093038 -84584510 + L2 LINE L2 3176 3312 -1 28 33 0 49 chr18 2093415 2093456 -84584092 + AT_rich Low_complexity Low_complexity 1 40 -18 2964 113 9 2 chr18 2093456 2093908 -84583640 - L1MA1 LINE L1 -7 6295 5841 28 33 0 49 chr18 2093908 2093927 -84583621 + AT_rich Low_complexity Low_complexity 40 58 0 870 180 18 55 chr18 2094446 2094663 -84582885 - MER3 DNA MER1_type 0 209 1 219 387 36 30 chr18 2094804 2094972 -84582576 - MIR3 SINE MIR -38 170 2 270 275 38 38 chr18 2096128 2096208 -84581340 - L3 LINE CR1 -10 1567 1488 * 839 308 147 14 chr18 2096205 2096634 -84580914 - L2 LINE L2 -3 3310 2825 2364 82 0 15 chr18 2096672 2097003 -84580545 - LTR17 LTR ERV1 -454 326 1 2273 79 0 0 chr18 2097003 2097295 -84580253 - HERV17 LTR ERV1 0 8626 8335 * 3221 64 9 2 chr18 2097285 2097709 -84579839 - HERV17 LTR ERV1 -1078 7548 7122 455 40 14 0 chr18 2097699 2097773 -84579775 - HERV17 LTR ERV1 -1619 7007 6933 * 871 329 115 17 chr18 2097800 2098280 -84579268 - L2 LINE L2 -503 2811 2285 444 330 69 39 chr18 2098292 2098598 -84578950 - L3 LINE CR1 -100 1477 1163 3050 147 134 9 chr18 2099588 2100131 -84577417 + LTR9 LTR ERV1 2 612 0 21 0 0 0 chr18 2100562 2100583 -84576965 + AT_rich Low_complexity Low_complexity 1 21 0 28 29 0 0 chr18 2100623 2100658 -84576890 + AT_rich Low_complexity Low_complexity 1 35 0 7574 22 0 0 chr18 2100719 2101740 -84575808 - L1PA3 LINE L1 0 6155 5146 189 346 0 0 chr18 2102141 2102193 -84575355 + L2 LINE L2 3209 3260 -12 427 325 8 0 chr18 2103098 2103224 -84574324 + L2 LINE L2 3186 3312 -1 313 327 36 9 chr18 2103433 2103543 -84574005 + MIR SINE MIR 74 186 -76 21 95 0 0 chr18 2103565 2103628 -84573920 + AT_rich Low_complexity Low_complexity 1 63 0 207 265 72 24 chr18 2103628 2103711 -84573837 - L2 LINE L2 -5 3267 3181 21 0 0 0 chr18 2103774 2103795 -84573753 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 2103828 2103856 -84573692 + AT_rich Low_complexity Low_complexity 1 28 0 718 254 85 33 chr18 2104615 2104854 -84572694 - MLT2B1 LTR ERVL -1 519 215 2155 135 0 0 chr18 2104940 2105252 -84572296 - AluSx SINE Alu 0 312 1 5576 130 16 17 chr18 2106129 2106727 -84570821 - MER4D LTR ERV1 -7 896 298 1995 160 0 0 chr18 2106727 2107033 -84570515 - AluSx SINE Alu -6 306 1 5576 130 16 17 chr18 2107033 2107331 -84570217 - MER4D LTR ERV1 -605 298 1 2208 164 31 64 chr18 2107821 2107892 -84569656 - MER41B LTR ERV1 -51 584 512 2172 104 3 25 chr18 2107892 2108209 -84569339 + AluSg SINE Alu 1 310 0 2208 164 31 64 chr18 2108209 2108624 -84568924 - MER41B LTR ERV1 -123 512 114 22 0 0 0 chr18 2109400 2109422 -84568126 + AT_rich Low_complexity Low_complexity 1 22 0 290 294 24 0 chr18 2109741 2109826 -84567722 - MIR SINE MIR -79 183 97 2050 112 4 0 chr18 2110011 2110288 -84567260 - AluSc SINE Alu -19 290 13 218 284 12 0 chr18 2110377 2110458 -84567090 + T-rich Low_complexity Low_complexity 3 84 0 2161 116 0 0 chr18 2110476 2110770 -84566778 - AluSx SINE Alu -18 294 1 27 29 0 0 chr18 2110857 2110891 -84566657 + AT_rich Low_complexity Low_complexity 1 34 0 584 186 65 0 chr18 2111046 2111195 -84566353 - L1M4 LINE L1 -2362 3784 3621 1799 181 15 9 chr18 2111214 2111551 -84565997 + MLT1A1 LTR MaLR 25 363 -2 4762 156 33 89 chr18 2161628 2162745 -84514803 - Tigger3b DNA MER2_type -174 1057 3 338 345 23 12 chr18 2162854 2163025 -84514523 - L1M4 LINE L1 -1908 4238 4066 959 274 119 5 chr18 2163175 2163587 -84513961 - L1ME LINE L1 -405 5757 5299 1058 209 25 60 chr18 2163643 2163926 -84513622 + MER61B LTR ERV1 124 396 -29 238 244 72 72 chr18 2163936 2164198 -84513350 - L1ME LINE L1 -886 5260 4999 7440 204 87 72 chr18 2164219 2164682 -84512866 - L1MC3 LINE L1 -30 7755 7301 1194 206 73 42 chr18 2164682 2164969 -84512579 + AluJb SINE Alu 1 296 -6 279 0 0 0 chr18 2164970 2165001 -84512547 + (CA)n Simple_repeat Simple_repeat 2 32 0 7440 204 87 72 chr18 2165001 2165146 -84512402 - L1MC3 LINE L1 -484 7301 7160 2093 140 0 0 chr18 2165146 2165454 -84512094 - AluY SINE Alu -1 310 3 865 143 0 8 chr18 2165461 2165587 -84511961 - AluJb SINE Alu -185 127 3 7440 204 87 72 chr18 2165587 2165815 -84511733 - L1MC3 LINE L1 -630 7155 6932 532 88 0 25 chr18 2165815 2165895 -84511653 - MADE1 DNA Mariner 0 80 3 7440 204 87 72 chr18 2165895 2166710 -84510838 - L1MC3 LINE L1 -853 6932 6131 2101 119 22 40 chr18 2166710 2167081 -84510467 + THE1B LTR MaLR 1 364 0 7440 204 87 72 chr18 2167081 2167317 -84510231 - L1MC3 LINE L1 -1654 6131 5900 2007 102 39 7 chr18 2167317 2167600 -84509948 - AluSc SINE Alu -17 292 1 7440 204 87 72 chr18 2167600 2167960 -84509588 - L1MC3 LINE L1 -1885 5900 5337 5442 162 38 10 chr18 2167972 2168932 -84508616 + L1MC3 LINE L1 4316 5317 -983 329 21 0 43 chr18 2168932 2168979 -84508569 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 5442 162 38 10 chr18 2168979 2169259 -84508289 + L1MA8 LINE L1 5317 5588 -712 1502 200 40 33 chr18 2169251 2169681 -84507867 + L1MA8 LINE L1 5858 6290 -1 * 1426 211 59 43 chr18 2169677 2170117 -84507431 - L1MB8 LINE L1 -53 6125 5679 * 351 197 103 54 chr18 2170120 2170343 -84507205 - L1M4b LINE L1 -3993 2964 2731 479 240 27 80 chr18 2170660 2170685 -84506863 - L1M4b LINE L1 -4598 2540 2515 207 0 0 0 chr18 2170685 2170708 -84506840 + (TTG)n Simple_repeat Simple_repeat 2 24 0 479 240 27 80 chr18 2170708 2170907 -84506641 - L1M4b LINE L1 -4623 2515 2328 2380 82 10 70 chr18 2170912 2171315 -84506233 + L1PB1 LINE L1 5602 5980 -171 * 4215 250 61 46 chr18 2171306 2171606 -84505942 - L1M4b LINE L1 -4890 1965 1671 1844 199 65 25 chr18 2171606 2172053 -84505495 + MLT1C LTR MaLR 3 467 0 4215 250 61 46 chr18 2172053 2173324 -84504224 - L1M4b LINE L1 -5184 1671 356 2743 22 0 0 chr18 2173324 2173635 -84503913 + AluY SINE Alu 1 311 0 4215 250 61 46 chr18 2173635 2173684 -84503864 - L1M4b LINE L1 -6499 356 309 2089 200 95 28 chr18 2173686 2174222 -84503326 + LTR49 LTR ERV1 1 572 -23 604 249 78 78 chr18 2174266 2174523 -84503025 - L1M4b LINE L1 -6591 268 12 744 239 35 81 chr18 2174532 2174720 -84502828 - L1M4 LINE L1 -1142 5004 4842 704 141 16 23 chr18 2174720 2174848 -84502700 - FLAM_C SINE Alu -6 127 1 744 239 35 81 chr18 2174848 2175056 -84502492 - L1M4 LINE L1 -1304 4842 4626 396 216 32 17 chr18 2175245 2175579 -84501969 + (TTA)n Simple_repeat Simple_repeat 1 338 0 207 0 0 0 chr18 2175617 2175640 -84501908 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 365 216 0 3 chr18 2175641 2175725 -84501823 - FLAM_A SINE Alu -34 99 33 561 296 32 53 chr18 2175752 2176130 -84501418 + L1MC/D LINE L1 3846 4215 -1931 662 258 88 38 chr18 2176322 2176562 -84500986 + L1MC/D LINE L1 5334 5585 -2223 1277 165 0 5 chr18 2176562 2176786 -84500762 - Tigger4(Zombi) DNA MER2_type 0 2731 2509 1200 151 38 14 chr18 2176811 2177023 -84500525 - Tigger4(Zombi) DNA MER2_type -2514 217 1 290 92 132 92 chr18 2176956 2177032 -84500516 + MER46A DNA MER2_type 75 153 -83 * 235 308 26 13 chr18 2177032 2177110 -84500438 + L1MC/D LINE L1 5593 5671 -2137 180 0 0 0 chr18 2179566 2179586 -84497962 + (TA)n Simple_repeat Simple_repeat 1 20 0 553 224 75 19 chr18 2181576 2181737 -84495811 + MLT1B LTR MaLR 1 170 -220 431 207 0 0 chr18 2183079 2183161 -84494387 - MLT2B2 LTR ERVL -433 82 1 285 314 78 75 chr18 2183929 2184276 -84493272 + LTR16B LTR ERVL 110 457 -7 293 298 138 32 chr18 2184508 2184726 -84492822 - L3 LINE CR1 -166 1411 1171 588 306 78 20 chr18 2184973 2185218 -84492330 - MIR SINE MIR -2 260 2 466 217 28 19 chr18 2185494 2185600 -84491948 + L2 LINE L2 3203 3309 -4 326 277 138 41 chr18 2185688 2185883 -84491665 - L3 LINE CR1 -733 844 631 2596 26 6 6 chr18 2185898 2186209 -84491339 - AluY SINE Alu 0 311 1 277 274 26 60 chr18 2187113 2187230 -84490318 + HAL1 LINE L1 316 428 -2079 1542 227 38 12 chr18 2187357 2187824 -84489724 - ERVL LTR ERVL -2345 3419 2855 207 0 0 0 chr18 2187824 2187847 -84489701 + (TG)n Simple_repeat Simple_repeat 2 24 0 1542 227 38 12 chr18 2187847 2188130 -84489418 - ERVL LTR ERVL -2909 2855 2581 929 204 11 6 chr18 2188148 2188329 -84489219 - MLT2C1 LTR ERVL -215 182 1 2356 231 64 25 chr18 2188538 2189466 -84488082 + L1MCb LINE L1 572 1552 -5006 468 0 0 0 chr18 2189466 2189518 -84488030 + (CA)n Simple_repeat Simple_repeat 2 53 0 2356 231 64 25 chr18 2189518 2189681 -84487867 + L1MCb LINE L1 1552 1707 -4851 221 340 28 57 chr18 2189685 2189826 -84487722 + L2 LINE L2 2946 3082 -231 4681 197 80 9 chr18 2189839 2190772 -84486776 + L1MA3 LINE L1 16 1015 -6550 5084 143 17 7 chr18 2190774 2192396 -84485152 + L1MA3 LINE L1 5810 7449 -275 23 0 0 0 chr18 2192470 2192493 -84485055 + AT_rich Low_complexity Low_complexity 1 23 0 1616 130 19 0 chr18 2192499 2192761 -84484787 + L1MA2 LINE L1 6034 6300 -4 309 291 31 0 chr18 2192839 2192966 -84484582 + L2 LINE L2 3115 3245 -68 308 283 0 19 chr18 2193073 2193179 -84484369 - MIR SINE MIR -1 261 158 562 304 87 27 chr18 2193691 2193990 -84483558 - LTR16A LTR ERVL -118 332 16 261 272 32 48 chr18 2194622 2194747 -84482801 + MIR SINE MIR 85 207 -55 215 328 38 0 chr18 2194900 2194983 -84482565 + MIR SINE MIR 95 149 -59 224 224 35 0 chr18 2195039 2195097 -84482451 + (CACCAT)n Simple_repeat Simple_repeat 2 61 0 27 73 0 0 chr18 2195160 2195215 -84482333 + AT_rich Low_complexity Low_complexity 1 55 0 395 78 0 178 chr18 2195594 2195684 -84481864 + MADE1 DNA Mariner 2 75 -5 264 59 0 0 chr18 2195684 2195718 -84481830 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 675 140 9 0 chr18 2195721 2195828 -84481720 + AluSp SINE Alu 1 108 -205 298 270 43 9 chr18 2196254 2196369 -84481179 + MER87 LTR ERV1 423 541 0 435 338 139 34 chr18 2196373 2196502 -84481046 + L2 LINE L2 1868 1982 -1332 2717 179 17 4 chr18 2196502 2196982 -84480566 + MER66B LTR ERV1 1 486 0 435 338 139 34 chr18 2196982 2197227 -84480321 + L2 LINE L2 1982 2200 -1114 452 259 133 6 chr18 2197227 2197385 -84480163 + MER45A DNA AcHobo 1 178 0 435 338 139 34 chr18 2197385 2197649 -84479899 + L2 LINE L2 2200 2574 -740 357 206 0 15 chr18 2197932 2198000 -84479548 - L2 LINE L2 -58 3255 3189 187 327 39 0 chr18 2198909 2198961 -84478587 - L2 LINE L2 -479 2835 2782 890 202 73 20 chr18 2199123 2199370 -84478178 + LTR37B LTR ERV1 209 468 0 4455 46 0 0 chr18 2199832 2200371 -84477177 - L1PA7 LINE L1 -15 6139 5601 226 273 26 13 chr18 2200390 2200467 -84477081 + U6 snRNA snRNA 5 82 -25 795 165 0 0 chr18 2200493 2200614 -84476934 - FLAM_C SINE Alu -12 121 1 2326 139 13 20 chr18 2200656 2201051 -84476497 + MER4E LTR ERV1 1 392 -387 1084 174 73 14 chr18 2201043 2201262 -84476286 + MER4D LTR ERV1 635 866 -37 * 32 86 0 0 chr18 2201262 2201343 -84476205 + AT_rich Low_complexity Low_complexity 1 81 0 259 108 0 0 chr18 2201343 2201380 -84476168 + MER4D LTR ERV1 867 903 0 298 292 89 36 chr18 2201676 2201844 -84475704 - L1ME LINE L1 -375 5795 5619 1860 159 53 3 chr18 2202802 2203123 -84474425 + MER1B DNA MER1_type 1 337 0 269 269 39 29 chr18 2204048 2204152 -84473396 - MIR SINE MIR -111 151 47 501 287 29 11 chr18 2204554 2204728 -84472820 - MIR SINE MIR -2 260 84 27 29 0 0 chr18 2205334 2205368 -84472180 + AT_rich Low_complexity Low_complexity 1 34 0 184 239 64 83 chr18 2207089 2207156 -84470392 - MIR SINE MIR -74 188 122 1618 102 0 78 chr18 2207156 2207401 -84470147 + AluSx SINE Alu 1 226 -86 184 239 64 83 chr18 2207401 2207442 -84470106 - MIR SINE MIR -140 122 82 2726 7 0 0 chr18 2207556 2207851 -84469697 + AluY SINE Alu 1 295 -16 577 150 9 26 chr18 2210084 2210183 -84467365 + MER41B LTR ERV1 1 97 -538 315 125 0 0 chr18 2210183 2210231 -84467317 - MLT2A1 LTR ERVL 0 444 397 399 258 0 0 chr18 2210352 2210507 -84467041 + (TA)n Simple_repeat Simple_repeat 1 155 0 246 174 0 0 chr18 2210537 2210583 -84466965 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 3199 70 0 0 chr18 2210608 2211006 -84466542 - MLT2A1 LTR ERVL -44 400 3 43026 72 19 5 chr18 2211008 2216587 -84460961 - HERVL-A1 LTR ERVL 0 5654 1 351 96 0 0 chr18 2216587 2216639 -84460909 - MLT2A1 LTR ERVL 0 444 393 3149 82 2 0 chr18 2216681 2217084 -84460464 - MLT2A1 LTR ERVL -40 404 1 3537 119 15 8 chr18 2217084 2217620 -84459928 + MER41B LTR ERV1 96 635 0 237 158 37 0 chr18 2218085 2218167 -84459381 + (TA)n Simple_repeat Simple_repeat 2 86 0 270 213 0 25 chr18 2218267 2218347 -84459201 - L1 LINE L1 -2597 4135 4058 3131 228 90 84 chr18 2218364 2219676 -84457872 - L1 LINE L1 -3768 2964 1661 437 236 55 18 chr18 2219676 2219786 -84457762 - FLAM_A SINE Alu -19 123 10 3131 228 90 84 chr18 2219786 2220543 -84457005 - L1 LINE L1 -5071 1661 68 343 229 0 0 chr18 2220611 2220681 -84456867 - L1M3d LINE L1 -5816 75 6 1263 75 0 0 chr18 2221120 2221308 -84456240 + (GA)n Simple_repeat Simple_repeat 1 221 -21 279 0 0 0 chr18 2221308 2221339 -84456209 + (TG)n Simple_repeat Simple_repeat 1 31 0 1263 75 0 0 chr18 2221339 2221362 -84456186 + (GA)n Simple_repeat Simple_repeat 220 242 0 355 50 0 33 chr18 2222154 2222214 -84455334 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 2149 138 3 0 chr18 2222316 2222627 -84454921 + AluSx SINE Alu 1 312 0 3173 247 43 27 chr18 2223414 2225115 -84452433 + L1MCb LINE L1 80 1810 -4754 793 166 20 0 chr18 2225564 2225715 -84451833 + L1MB7 LINE L1 6031 6184 0 2421 211 11 2 chr18 2225812 2226384 -84451164 - L1MA9 LINE L1 -1358 4788 4212 3536 213 30 13 chr18 2226392 2227690 -84449858 + L1MA9 LINE L1 4785 6104 -208 189 107 0 0 chr18 2227708 2227736 -84449812 + (CA)n Simple_repeat Simple_repeat 1 28 0 479 210 37 0 chr18 2227738 2227857 -84449691 + L1MA9 LINE L1 6166 6287 -4 315 0 0 0 chr18 2227937 2227972 -84449576 + (CA)n Simple_repeat Simple_repeat 2 36 0 289 277 0 11 chr18 2228729 2228823 -84448725 + HAL1 LINE L1 1425 1517 -990 679 256 103 54 chr18 2228869 2229150 -84448398 - L1 LINE L1 -3152 2994 2728 2586 33 0 3 chr18 2229150 2229453 -84448095 + AluY SINE Alu 1 302 -9 679 256 103 54 chr18 2229453 2229785 -84447763 - L1 LINE L1 -3418 2728 2351 360 352 33 40 chr18 2230051 2230355 -84447193 + L1ME2 LINE L1 142 443 -5953 * 3505 38 17 0 chr18 2230340 2230861 -84446687 - L1PA4 LINE L1 -679 5475 4952 5989 27 0 0 chr18 2230861 2231556 -84445992 + L1PA4 LINE L1 5455 6155 0 1812 244 68 95 chr18 2232009 2232514 -84445034 + L1ME2 LINE L1 660 1177 -5219 1232 161 26 26 chr18 2232514 2232787 -84444761 + L1MA7 LINE L1 6014 6286 -5 1812 244 68 95 chr18 2232787 2233930 -84443618 + L1ME2 LINE L1 1177 2265 -4131 485 159 47 0 chr18 2233933 2234040 -84443508 + L1MC3 LINE L1 6978 7089 -696 247 244 37 49 chr18 2234045 2234127 -84443421 + MLT1F1 LTR MaLR 39 119 -448 1839 231 101 20 chr18 2234178 2235391 -84442157 + L1ME2 LINE L1 4715 6024 -209 1869 151 14 0 chr18 2235457 2235742 -84441806 + AluSx SINE Alu 1 289 -23 1087 283 156 25 chr18 2235999 2236434 -84441114 + MLT2E LTR ERVL 128 619 -9 264 320 41 48 chr18 2237043 2237190 -84440358 + L2 LINE L2 1780 1925 -1389 846 247 62 4 chr18 2237548 2237775 -84439773 - LTR33 LTR ERVL 0 521 282 475 316 0 7 chr18 2237775 2237914 -84439634 - LTR33 LTR ERVL -354 167 30 1838 242 33 44 chr18 2238286 2238361 -84439187 + MER92B LTR ERV1 1 75 -561 3119 136 36 32 chr18 2238361 2238885 -84438663 - MER1A DNA MER1_type -1 526 1 1838 242 33 44 chr18 2238885 2239350 -84438198 + MER92B LTR ERV1 75 535 -101 260 182 0 146 chr18 2239409 2239519 -84438029 + MER92B LTR ERV1 543 636 0 537 323 60 28 chr18 2239571 2239819 -84437729 - L2 LINE L2 -2 3270 3015 1761 195 3 17 chr18 2239925 2240274 -84437274 - MER2 DNA MER2_type 0 344 1 21 95 0 0 chr18 2241821 2241884 -84435664 + AT_rich Low_complexity Low_complexity 1 63 0 227 256 0 0 chr18 2242324 2242363 -84435185 + L2 LINE L2 3251 3289 -24 7689 21 4 1 chr18 2242797 2244213 -84433335 + L1PA4 LINE L1 4737 6155 0 180 0 0 0 chr18 2244220 2244240 -84433308 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 784 154 77 0 chr18 2244674 2244830 -84432718 - L1MB3 LINE L1 -2 6181 6014 22 35 0 0 chr18 2245185 2245214 -84432334 + AT_rich Low_complexity Low_complexity 1 29 0 197 397 29 29 chr18 2245537 2245673 -84431875 + L2 LINE L2 3122 3257 -15 649 321 67 0 chr18 2245953 2246193 -84431355 - MIR SINE MIR 0 262 7 2360 87 3 0 chr18 2246302 2246611 -84430937 + AluSg SINE Alu 1 310 0 203 235 29 44 chr18 2246934 2247002 -84430546 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 187 152 0 0 chr18 2247019 2247052 -84430496 - MIR SINE MIR -108 154 122 600 256 42 42 chr18 2247122 2247313 -84430235 + MLT1G LTR MaLR 400 590 0 1414 159 61 0 chr18 2247752 2247997 -84429551 - AluJb SINE Alu -47 265 6 21 36 0 0 chr18 2248776 2248804 -84428744 + AT_rich Low_complexity Low_complexity 1 28 0 588 322 33 0 chr18 2248927 2249110 -84428438 - MIR SINE MIR -13 249 61 204 390 34 21 chr18 2249292 2249528 -84428020 + L2 LINE L2 2819 3057 -215 2510 111 5 24 chr18 2249698 2250069 -84427479 - THE1B LTR MaLR 0 364 1 21 36 0 0 chr18 2250171 2250199 -84427349 + AT_rich Low_complexity Low_complexity 1 28 0 2515 64 0 0 chr18 2250320 2250618 -84426930 - AluY SINE Alu -13 298 1 255 292 0 22 chr18 2250822 2250911 -84426637 - MIR SINE MIR -78 184 98 275 229 153 8 chr18 2251261 2251379 -84426169 - L1ME4a LINE L1 0 6121 5987 336 303 32 83 chr18 2251614 2251891 -84425657 - L2 LINE L2 -677 2637 2375 243 217 0 0 chr18 2251898 2251944 -84425604 - MER69 DNA AcHobo 0 2526 2481 244 298 135 0 chr18 2251956 2252060 -84425488 - MER69 DNA AcHobo -2407 119 2 246 234 141 0 chr18 2252066 2252130 -84425418 - L2 LINE L2 -953 2361 2289 364 291 111 83 chr18 2253266 2253699 -84423849 + MLT1J2 LTR MaLR 3 447 -3 234 306 194 6 chr18 2255017 2255177 -84422371 + L2 LINE L2 2863 3052 -261 27 0 0 0 chr18 2255431 2255458 -84422090 + AT_rich Low_complexity Low_complexity 1 27 0 24 53 0 0 chr18 2256244 2256282 -84421266 + AT_rich Low_complexity Low_complexity 1 38 0 5754 34 0 1 chr18 2256415 2257091 -84420457 - L1PA5 LINE L1 -6 6148 5474 22 35 0 0 chr18 2257286 2257315 -84420233 + AT_rich Low_complexity Low_complexity 1 29 0 26177 133 14 13 chr18 2258200 2259843 -84417705 + L1PA8A LINE L1 336 1976 -4470 1287 184 49 88 chr18 2259843 2260311 -84417237 - LTR7 LTR ERV1 0 450 1 26177 133 14 13 chr18 2260311 2264707 -84412841 + L1PA8A LINE L1 1976 6446 0 182 143 29 29 chr18 2264765 2264835 -84412713 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 2356 65 7 7 chr18 2264844 2265138 -84412410 - AluSg SINE Alu -16 294 1 286 270 45 18 chr18 2265186 2265297 -84412251 - HAL1b LINE L1 -41 1307 1194 223 144 33 22 chr18 2265311 2265401 -84412147 + (TA)n Simple_repeat Simple_repeat 1 91 0 241 231 141 13 chr18 2265428 2265506 -84412042 + MIR SINE MIR 118 205 -57 223 286 181 48 chr18 2265518 2265728 -84411820 + L2 LINE L2 3067 3304 -9 183 300 57 0 chr18 2265800 2265870 -84411678 - MIR3 SINE MIR -48 160 87 300 200 0 0 chr18 2266654 2266719 -84410829 + (TG)n Simple_repeat Simple_repeat 2 66 0 1109 106 6 12 chr18 2267162 2267323 -84410225 - AluSq SINE Alu -30 283 124 307 312 62 32 chr18 2268256 2269092 -84408456 - L1M4 LINE L1 -3155 2991 2131 32 67 0 0 chr18 2269206 2269266 -84408282 + AT_rich Low_complexity Low_complexity 1 60 0 420 195 49 46 chr18 2269347 2269500 -84408048 + L1M4 LINE L1 5658 5816 -368 341 244 133 118 chr18 2269520 2269532 -84408016 + L1ME3A LINE L1 5751 5761 -409 1433 244 34 8 chr18 2269532 2269888 -84407660 - MLT1A1 LTR MaLR 0 365 1 341 244 133 118 chr18 2269888 2270289 -84407259 + L1ME3A LINE L1 5761 6170 0 2151 104 0 0 chr18 2270305 2270585 -84406963 + AluSx SINE Alu 1 280 -32 279 0 0 0 chr18 2270586 2270617 -84406931 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 10240 140 20 13 chr18 2271946 2272253 -84405295 + Tigger1 DNA MER2_type 2 306 -2112 2330 66 3 0 chr18 2272253 2272539 -84405009 + AluY SINE Alu 1 287 -24 10240 140 20 13 chr18 2272539 2272550 -84404998 + Tigger1 DNA MER2_type 306 315 -2103 180 0 0 0 chr18 2272550 2272570 -84404978 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 10240 140 20 13 chr18 2272570 2273933 -84403615 + Tigger1 DNA MER2_type 315 1695 -723 323 250 24 0 chr18 2273999 2274083 -84403465 - L1MEd LINE L1 -5932 187 102 2649 45 0 0 chr18 2274588 2274899 -84402649 + AluY SINE Alu 1 311 0 204 333 67 0 chr18 2275322 2275442 -84402106 + MIR SINE MIR 129 256 -6 242 391 6 39 chr18 2276675 2276854 -84400694 - MER5B DNA MER1_type 0 178 6 778 173 0 0 chr18 2277035 2277168 -84400380 + AluJb SINE Alu 170 302 -10 2070 144 3 3 chr18 2277647 2277959 -84399589 - AluSx SINE Alu 0 312 1 526 315 52 32 chr18 2277984 2278556 -84398992 - L1ME3A LINE L1 -302 5868 5264 267 302 35 12 chr18 2278813 2278899 -84398649 + L2 LINE L2 3190 3277 -36 242 284 93 21 chr18 2279057 2279251 -84398297 - L1ME3A LINE L1 -1052 5094 4887 310 344 19 6 chr18 2279606 2279763 -84397785 - L1ME3A LINE L1 -1610 4536 4378 356 143 171 0 chr18 2279765 2279835 -84397713 - Tigger3(Golem) DNA MER2_type -2 3027 2946 2292 143 27 77 chr18 2279851 2280374 -84397174 + Tigger3(Golem) DNA MER2_type 2392 2888 -141 401 127 52 0 chr18 2280512 2280646 -84396902 + (TA)n Simple_repeat Simple_repeat 1 141 0 266 132 103 44 chr18 2280649 2280717 -84396831 - LTR66 LTR ERVL -171 439 368 1111 269 53 56 chr18 2281757 2282815 -84394733 + L1MCc LINE L1 1261 2529 -4593 1254 246 96 2 chr18 2282828 2283254 -84394294 + L1MB3 LINE L1 4897 5362 -784 806 218 70 91 chr18 2283264 2283817 -84393731 + MER52A LTR ERV1 667 1349 -406 312 318 50 39 chr18 2283821 2284000 -84393548 + MER52A LTR ERV1 1290 1470 -285 * 658 294 0 0 chr18 2283998 2284161 -84393387 + MER52A LTR ERV1 1593 1755 0 4415 169 11 2 chr18 2284161 2284962 -84392586 + L1MB3 LINE L1 5360 6167 -16 362 287 124 16 chr18 2284980 2285238 -84392310 + L1MCc LINE L1 2564 2849 -4273 1378 265 75 16 chr18 2285319 2285892 -84391656 + L1MCc LINE L1 2945 3551 -3390 21 0 0 0 chr18 2285962 2285983 -84391565 + AT_rich Low_complexity Low_complexity 1 21 0 294 73 0 0 chr18 2286444 2286485 -84391063 + (TG)n Simple_repeat Simple_repeat 2 42 0 24 53 0 0 chr18 2286741 2286779 -84390769 + AT_rich Low_complexity Low_complexity 1 38 0 1668 168 33 0 chr18 2286890 2287187 -84390361 + AluJb SINE Alu 1 306 0 306 211 26 0 chr18 2287202 2287278 -84390270 + L1ME LINE L1 5778 5855 -266 2692 197 55 4 chr18 2288708 2289231 -84388317 - MER44D DNA MER2_type 0 605 1 195 291 0 0 chr18 2289332 2289387 -84388161 + L2 LINE L2 3016 3070 -243 452 304 18 0 chr18 2290054 2290166 -84387382 + L2 LINE L2 3199 3312 -1 22 56 0 0 chr18 2290195 2290231 -84387317 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr18 2294473 2294497 -84383051 + AT_rich Low_complexity Low_complexity 1 24 0 872 215 53 46 chr18 2295155 2295586 -84381962 + MLT1A1 LTR MaLR 1 365 0 379 358 83 5 chr18 2295682 2295875 -84381673 - MIR SINE MIR -6 256 49 287 313 109 7 chr18 2295959 2296106 -84381442 - MIR SINE MIR -72 190 29 1326 242 73 61 chr18 2296316 2296792 -84380756 - LTR65 LTR ERV1 -28 641 160 3479 139 16 7 chr18 2296874 2297443 -84380105 - Tigger1 DNA MER2_type 0 2418 1845 4243 170 8 1 chr18 2297443 2298236 -84379312 - L1P LINE L1 -1208 4938 4141 7721 137 24 9 chr18 2298236 2299495 -84378053 - Tigger1 DNA MER2_type -867 1551 274 1369 249 84 41 chr18 2299852 2300342 -84377206 + MLT1J LTR MaLR 1 511 0 765 244 62 0 chr18 2300562 2300738 -84376810 + MIR SINE MIR 2 188 -74 24 91 0 0 chr18 2300759 2300825 -84376723 + AT_rich Low_complexity Low_complexity 1 66 0 235 260 20 0 chr18 2300825 2300875 -84376673 + MIR SINE MIR 191 241 -21 6224 26 0 3 chr18 2303162 2303918 -84373630 + L1PA5 LINE L1 5405 6158 0 260 91 23 0 chr18 2304876 2304920 -84372628 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 3409 272 30 13 chr18 2305203 2306189 -84371359 + L1MCb LINE L1 12 1014 -5031 3644 175 28 13 chr18 2306190 2306876 -84370672 - LTR34 LTR ERV1 0 699 4 2386 253 28 20 chr18 2306878 2307642 -84369906 + L1MCb LINE L1 1013 1782 -4782 1557 230 42 16 chr18 2307639 2308087 -84369461 + L1M4 LINE L1 4547 5006 -1140 * 7075 185 46 30 chr18 2308168 2309690 -84367858 + L1MC3 LINE L1 6222 7768 -17 241 280 110 10 chr18 2310108 2310208 -84367340 + MIR SINE MIR 28 137 -125 633 149 214 35 chr18 2310363 2310564 -84366984 + L1MC3 LINE L1 6866 7102 -683 405 253 0 0 chr18 2310568 2310647 -84366901 + MLT1F1 LTR MaLR 45 123 -444 2389 200 27 46 chr18 2310667 2311253 -84366295 + L1MD3 LINE L1 7421 7995 0 232 222 19 0 chr18 2311395 2311449 -84366099 + (TA)n Simple_repeat Simple_repeat 1 55 0 21 0 0 0 chr18 2311467 2311488 -84366060 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr18 2312466 2312519 -84365029 + AT_rich Low_complexity Low_complexity 1 53 0 735 154 0 22 chr18 2312532 2312668 -84364880 + FLAM_C SINE Alu 1 133 0 198 300 79 21 chr18 2313136 2313276 -84364272 - MIR SINE MIR -29 233 86 259 273 151 6 chr18 2314104 2314274 -84363274 - MIR SINE MIR -16 246 48 544 324 84 31 chr18 2314417 2314704 -84362844 - L3 LINE CR1 -34 1543 1242 229 68 45 0 chr18 2314757 2314801 -84362747 + T-rich Low_complexity Low_complexity 3 48 0 791 190 61 0 chr18 2314808 2314971 -84362577 - L1PB4 LINE L1 -18 6138 5966 441 288 102 53 chr18 2315118 2315344 -84362204 - L3 LINE CR1 -557 1020 784 314 294 71 71 chr18 2315430 2315627 -84361921 - MIR SINE MIR -46 216 20 804 337 80 28 chr18 2315642 2316144 -84361404 - L3 LINE CR1 -861 716 189 249 197 0 0 chr18 2316151 2316212 -84361336 + CT-rich Low_complexity Low_complexity 2 62 0 413 315 87 0 chr18 2316605 2316754 -84360794 - L2 LINE L2 -559 2755 2594 237 351 13 0 chr18 2316846 2316923 -84360625 + MIR SINE MIR 69 146 -116 291 128 70 6 chr18 2317113 2317269 -84360279 + (TA)n Simple_repeat Simple_repeat 1 166 0 809 282 109 33 chr18 2319801 2321020 -84356528 + L1M4 LINE L1 2506 4068 -2078 3574 111 0 4 chr18 2321020 2321533 -84356015 - MER9 LTR ERVK 0 511 1 809 282 109 33 chr18 2321533 2322225 -84355323 + L1M4 LINE L1 4068 4706 -1440 2659 241 83 50 chr18 2322266 2323538 -84354010 + Zaphod DNA AcHobo 2711 4025 -6 2759 142 28 2 chr18 2323646 2324119 -84353429 - MER31A LTR ERV1 0 485 1 21 71 0 0 chr18 2324876 2324918 -84352630 + AT_rich Low_complexity Low_complexity 1 42 0 225 308 0 0 chr18 2325071 2325123 -84352425 + polypyrimidine Low_complexity Low_complexity 4 55 0 1923 215 100 48 chr18 2325904 2326657 -84350891 + Charlie1 DNA MER1_type 1929 2720 -41 205 273 100 73 chr18 2326701 2326811 -84350737 - MIR SINE MIR -64 144 32 2297 175 89 0 chr18 2326811 2327240 -84350308 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr18 2327403 2327425 -84350123 + AT_rich Low_complexity Low_complexity 1 22 0 267 313 0 0 chr18 2328064 2328160 -84349388 - L1MC4 LINE L1 -1333 6709 6614 330 26 0 0 chr18 2328174 2328213 -84349335 + (CA)n Simple_repeat Simple_repeat 2 40 0 180 97 0 0 chr18 2328213 2328244 -84349304 + (GA)n Simple_repeat Simple_repeat 1 31 0 540 175 8 63 chr18 2328249 2328375 -84349173 - MLT2B2 LTR ERVL -396 119 1 4690 128 1 0 chr18 2328887 2329584 -84347964 + L1P LINE L1 1 698 -5448 7445 33 3 1 chr18 2329584 2331105 -84346443 + L1PA5 LINE L1 4616 6152 -2 483 313 34 30 chr18 2331278 2331540 -84346008 + L1MEc LINE L1 112 374 -6022 5756 146 26 3 chr18 2331636 2332766 -84344782 - L1PA15-16 LINE L1 -4162 2687 1414 1416 205 17 0 chr18 2332764 2333057 -84344491 + L1 LINE L1 4011 4308 -1838 * 323 210 152 14 chr18 2333040 2333178 -84344370 - L1M4 LINE L1 -1687 4459 4303 * 501 233 89 38 chr18 2333260 2333496 -84344052 - L1MCa LINE L1 -3983 2443 2196 343 138 0 17 chr18 2334112 2334170 -84343378 - MER3 DNA MER1_type 0 209 153 1601 113 0 0 chr18 2334177 2334389 -84343159 + AluSq SINE Alu 1 212 -101 639 67 0 0 chr18 2334689 2334778 -84342770 + (TA)n Simple_repeat Simple_repeat 1 89 0 1516 190 25 4 chr18 2336155 2336434 -84341114 + MER49 LTR ERV1 1 285 -638 * 2930 189 9 83 chr18 2336407 2337220 -84340328 + MER4D LTR ERV1 43 903 0 1886 161 7 0 chr18 2337339 2337631 -84339917 + AluSx SINE Alu 1 294 -18 734 181 12 31 chr18 2337753 2337913 -84339635 - L1MA9 LINE L1 -89 6223 6067 5576 64 24 4 chr18 2337917 2338668 -84338880 - MER4E LTR ERV1 0 766 1 4562 129 65 31 chr18 2339519 2339822 -84337726 - MER4E-int LTR ERV1 -113 6645 6354 581 27 13 0 chr18 2339822 2339897 -84337651 + (TAGA)n Simple_repeat Simple_repeat 2 77 0 4562 129 65 31 chr18 2339897 2340463 -84337085 - MER4E-int LTR ERV1 -404 6354 5746 254 140 0 20 chr18 2340600 2340650 -84336898 + (TA)n Simple_repeat Simple_repeat 2 50 0 544 187 0 45 chr18 2340671 2340964 -84336584 + (TA)n Simple_repeat Simple_repeat 1 279 0 433 176 6 41 chr18 2340984 2341154 -84336394 + (CATATA)n Simple_repeat Simple_repeat 3 166 0 57 0 0 0 chr18 2341192 2341249 -84336299 + AT_rich Low_complexity Low_complexity 1 57 0 347 317 28 31 chr18 2341249 2341426 -84336122 - MIR SINE MIR -44 218 47 511 301 99 32 chr18 2341447 2341759 -84335789 + MLT1K LTR MaLR 69 401 -187 1405 142 5 0 chr18 2342015 2342239 -84335309 - AluJb SINE Alu 0 311 87 666 153 0 17 chr18 2342782 2342900 -84334648 - AluJb SINE Alu -7 305 190 200 436 32 20 chr18 2342912 2343162 -84334386 + L2 LINE L2 196 448 -2866 1154 200 39 73 chr18 2343390 2343768 -84333780 + L1ME LINE L1 5280 5648 -518 249 237 0 0 chr18 2343791 2343850 -84333698 + MER52A LTR ERV1 1 59 -1696 1633 209 32 77 chr18 2344196 2344781 -84332767 + MER52A LTR ERV1 211 769 -986 1122 208 31 51 chr18 2344922 2345278 -84332270 - L1ME1 LINE L1 -128 6038 5690 3844 159 102 53 chr18 2345283 2346189 -84331359 - MER52A LTR ERV1 -2 1753 804 1289 126 72 5 chr18 2346299 2346522 -84331026 + THE1A LTR MaLR 118 355 0 6317 103 2 1 chr18 2346522 2347424 -84330124 + THE1A-int LTR MaLR 1 903 -677 1263 109 10 10 chr18 2348075 2348276 -84329272 + THE1A LTR MaLR 1 201 -154 1585 136 3 16 chr18 2348376 2348696 -84328852 - MER4B-int LTR ERV1 -1900 4858 4452 * 3010 144 81 4 chr18 2348695 2349215 -84328333 - MER4B-int LTR ERV1 -2670 4088 3529 1958 109 70 32 chr18 2349210 2349651 -84327897 - MER4B-int LTR ERV1 -4513 2245 1788 * 2234 130 0 0 chr18 2349678 2349978 -84327570 - AluSp SINE Alu -13 300 1 438 123 0 0 chr18 2350707 2350772 -84326776 + THE1A LTR MaLR 300 364 0 292 249 50 88 chr18 2351396 2351577 -84325971 - L1MC4a LINE L1 -1524 6284 6111 4703 178 80 91 chr18 2351577 2353029 -84324519 + L1M2 LINE L1 1 1436 -5413 207 0 0 0 chr18 2353646 2353669 -84323879 + (TG)n Simple_repeat Simple_repeat 1 23 0 219 411 81 0 chr18 2353748 2353872 -84323676 - L2 LINE L2 -2 3270 3137 35 107 0 0 chr18 2354193 2354333 -84323215 + AT_rich Low_complexity Low_complexity 1 140 0 21 0 0 0 chr18 2354493 2354514 -84323034 + AT_rich Low_complexity Low_complexity 1 21 0 202 293 30 50 chr18 2355316 2355415 -84322133 - MIR SINE MIR -100 162 66 401 237 21 11 chr18 2355510 2355603 -84321945 + MIR SINE MIR 42 135 -73 2319 300 47 49 chr18 2355891 2356595 -84320953 - ERVL LTR ERVL -1211 4553 3849 2335 177 14 7 chr18 2356595 2357024 -84320524 - Tigger2a DNA MER2_type 0 434 3 2319 300 47 49 chr18 2357024 2357248 -84320300 - ERVL LTR ERVL -1915 3849 3626 2080 108 0 14 chr18 2357248 2357556 -84319992 + AluSq SINE Alu 1 304 0 2319 300 47 49 chr18 2357556 2357829 -84319719 - ERVL LTR ERVL -2138 3626 3352 275 286 44 64 chr18 2357961 2358367 -84319181 + L1M4 LINE L1 1041 1438 -4946 828 258 52 52 chr18 2358486 2358963 -84318585 + L1M4 LINE L1 2486 2962 -3420 1018 247 115 11 chr18 2359052 2359583 -84317965 + L1M4 LINE L1 4364 4949 -1433 4812 127 26 5 chr18 2359598 2360394 -84317154 - L1PA11 LINE L1 0 6174 5362 665 251 85 15 chr18 2360429 2360688 -84316860 + L1M4 LINE L1 4992 5268 -1114 468 237 33 106 chr18 2360954 2361283 -84316265 + L1M4c LINE L1 3392 3696 -2686 311 340 70 59 chr18 2361317 2361588 -84315960 + L1M4c LINE L1 3851 4124 -2258 2274 211 74 26 chr18 2361629 2362082 -84315466 - L1MA9 LINE L1 -38 6274 5778 214 29 57 0 chr18 2362082 2362117 -84315431 + (TG)n Simple_repeat Simple_repeat 2 38 0 2274 211 74 26 chr18 2362117 2362323 -84315225 - L1MA9 LINE L1 -534 5778 5583 2565 169 14 0 chr18 2362324 2362744 -84314804 + MSTB LTR MaLR 1 426 0 7907 177 20 62 chr18 2362744 2363147 -84314401 + MSTB-int LTR MaLR 1 419 -1232 606 61 0 0 chr18 2363147 2363229 -84314319 + Alu SINE Alu 220 301 -8 7907 177 20 62 chr18 2363229 2364330 -84313218 + MSTB-int LTR MaLR 419 1512 -139 5267 82 20 11 chr18 2364330 2365089 -84312459 - MER4E LTR ERV1 0 766 1 7907 177 20 62 chr18 2365089 2365223 -84312325 + MSTB-int LTR MaLR 1512 1650 -1 2202 201 19 2 chr18 2365224 2365643 -84311905 + MSTB LTR MaLR 1 426 0 1442 170 9 16 chr18 2365645 2366063 -84311485 - L1MA9 LINE L1 -707 5584 5167 1137 313 51 20 chr18 2366065 2367143 -84310405 + L1M4c LINE L1 4182 5292 -1090 2116 101 3 14 chr18 2367257 2367577 -84309971 + AluSq SINE Alu 1 317 0 1211 170 37 63 chr18 2368795 2368959 -84308589 + MER82 DNA MER2_type 38 192 -461 2262 116 16 32 chr18 2368959 2369338 -84308210 - THE1C LTR MaLR -2 373 1 1211 170 37 63 chr18 2369338 2369473 -84308075 + MER82 DNA MER2_type 192 329 -324 826 259 26 0 chr18 2369459 2369648 -84307900 + MER82 DNA MER2_type 438 631 -22 * 232 297 63 67 chr18 2369770 2370009 -84307539 + MER102a DNA MER1_type 88 325 -5 327 147 32 4 chr18 2370350 2370423 -84307125 - AluYb8 SINE Alu -6 302 243 938 162 0 0 chr18 2370440 2370582 -84306966 - FLAM_C SINE Alu -1 142 1 3711 48 7 0 chr18 2371043 2371504 -84306044 - L1PA7 LINE L1 -1 6153 5690 181 390 41 24 chr18 2371713 2371836 -84305712 + L2 LINE L2 3132 3256 -16 26 74 0 0 chr18 2372875 2372929 -84304619 + AT_rich Low_complexity Low_complexity 1 54 0 678 127 48 6 chr18 2373281 2373446 -84304102 + CT-rich Low_complexity Low_complexity 1 172 0 2143 104 0 20 chr18 2373598 2373897 -84303651 - AluSc SINE Alu -16 293 1 711 191 16 16 chr18 2373917 2374106 -84303442 - L1M4 LINE L1 -966 5180 4992 * 3588 189 50 20 chr18 2374103 2374230 -84303318 - L1MB4 LINE L1 0 6180 6058 697 212 18 59 chr18 2374230 2374400 -84303148 - FRAM SINE Alu -2 164 2 3588 189 50 20 chr18 2374400 2374541 -84303007 - L1MB4 LINE L1 -122 6058 5923 1923 176 14 24 chr18 2374541 2374910 -84302638 - MLT1A1 LTR MaLR 0 365 1 3588 189 50 20 chr18 2374910 2375793 -84301755 - L1MB4 LINE L1 -257 5923 4986 1386 229 81 104 chr18 2375786 2376639 -84300909 - L1MB4 LINE L1 -2286 3860 3028 * 258 299 287 0 chr18 2377093 2377260 -84300288 + MIR SINE MIR 38 252 -10 710 330 79 16 chr18 2377502 2377942 -84299606 - L2 LINE L2 -206 3066 2597 507 158 2 0 chr18 2377976 2378078 -84299470 - L1PA15 LINE L1 -84 6079 5977 354 114 0 14 chr18 2378059 2378129 -84299419 + L1PA15 LINE L1 6074 6142 -23 * 311 366 144 25 chr18 2379196 2379750 -84297798 - L3 LINE CR1 -487 1090 471 305 195 0 11 chr18 2380786 2380873 -84296675 + GA-rich Low_complexity Low_complexity 1 86 0 212 143 0 0 chr18 2381588 2381623 -84295925 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 201 407 94 36 chr18 2381872 2382147 -84295401 - L2 LINE L2 -4 3268 2978 845 199 0 18 chr18 2383296 2383462 -84294086 + FRAM SINE Alu 1 161 -15 243 262 16 0 chr18 2383928 2383989 -84293559 + (AAGTG)n Simple_repeat Simple_repeat 4 65 0 1887 108 4 12 chr18 2384335 2384593 -84292955 - AluSx SINE Alu 0 312 57 208 327 46 42 chr18 2385360 2385507 -84292041 - MIR SINE MIR -66 142 18 452 135 0 0 chr18 2386936 2387010 -84290538 - AluJo SINE Alu -1 311 238 984 203 6 6 chr18 2387013 2387190 -84290358 - AluJo SINE Alu -135 177 1 2222 172 56 52 chr18 2389109 2389610 -84287938 + MLT1D LTR MaLR 1 503 -2 195 42 0 0 chr18 2389892 2389916 -84287632 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 233 282 56 0 chr18 2389925 2389996 -84287552 - L2 LINE L2 -38 3275 3201 382 20 0 20 chr18 2390571 2390621 -84286927 + MER30B DNA MER1_type 4 52 -138 2429 259 91 20 chr18 2440621 2441450 -84236098 + L1ME1 LINE L1 5275 6161 -5 694 271 27 32 chr18 2441687 2441875 -84235673 + MIR SINE MIR 5 191 -71 457 297 17 19 chr18 2442079 2442305 -84235243 - MIR SINE MIR -3 259 35 192 266 142 18 chr18 2442342 2442455 -84235093 - MIR SINE MIR -32 230 104 518 270 34 80 chr18 2442817 2443080 -84234468 - MER41E LTR ERV1 0 512 262 2359 110 0 0 chr18 2443592 2443957 -84233591 + AluSx SINE Alu 1 365 0 1949 277 101 56 chr18 2445560 2446943 -84230605 + HAL1 LINE L1 144 1589 -918 488 263 58 104 chr18 2446953 2447318 -84230230 - MLT1I LTR MaLR 0 409 62 1044 278 62 53 chr18 2447388 2447743 -84229805 + HAL1 LINE L1 1634 1984 -523 1850 202 116 9 chr18 2447743 2448199 -84229349 + MLT1D LTR MaLR 1 505 0 1044 278 62 53 chr18 2448199 2448386 -84229162 + HAL1 LINE L1 1984 2186 -321 8221 53 1 0 chr18 2448386 2449351 -84228197 - LTR5 LTR ERVK -3 966 1 1044 278 62 53 chr18 2449351 2449517 -84228031 + HAL1 LINE L1 2186 2349 -158 1317 210 131 79 chr18 2450196 2450778 -84226770 + LTR9 LTR ERV1 1 612 0 288 0 0 0 chr18 2450801 2450833 -84226715 + (TG)n Simple_repeat Simple_repeat 2 33 0 353 247 148 66 chr18 2451068 2451460 -84226088 + L1ME3 LINE L1 2687 3110 -3036 2165 254 141 37 chr18 2451526 2453780 -84223768 + L1ME3 LINE L1 3628 6118 -44 226 226 71 36 chr18 2453815 2453899 -84223649 + L1ME LINE L1 5433 5519 -643 2099 97 10 7 chr18 2454054 2454342 -84223206 + AluSp SINE Alu 1 289 -24 183 109 65 33 chr18 2454730 2454822 -84222726 + (TA)n Simple_repeat Simple_repeat 1 95 0 222 37 0 0 chr18 2454850 2454877 -84222671 + (CA)n Simple_repeat Simple_repeat 2 28 0 1016 224 0 4 chr18 2455039 2455267 -84222281 + L1MA9 LINE L1 4984 5210 -936 716 254 54 19 chr18 2455274 2455534 -84222014 + L1MA9 LINE L1 5935 6203 -109 14153 125 46 14 chr18 2455542 2455704 -84221844 - Tigger1 DNA MER2_type -1 2417 2262 1532 104 24 90 chr18 2455704 2455993 -84221555 - L1PB1 LINE L1 0 6151 5882 14153 125 46 14 chr18 2455993 2458148 -84219400 - Tigger1 DNA MER2_type -156 2262 27 28 71 0 0 chr18 2458197 2458253 -84219295 + AT_rich Low_complexity Low_complexity 1 56 0 2184 119 13 3 chr18 2460574 2460884 -84216664 + AluSq SINE Alu 1 313 0 23 54 0 0 chr18 2461204 2461241 -84216307 + AT_rich Low_complexity Low_complexity 1 37 0 5327 169 57 10 chr18 2461669 2462770 -84214778 - L1MC1 LINE L1 -2 6331 5178 443 247 73 36 chr18 2462971 2463190 -84214358 - MER106A DNA MER1_type -9 227 1 1791 142 66 51 chr18 2463640 2463972 -84213576 + MER1B DNA MER1_type 1 337 0 272 351 32 13 chr18 2464120 2464274 -84213274 - HsTC2 DNA Tc2 -1022 876 720 23 54 0 0 chr18 2464551 2464588 -84212960 + AT_rich Low_complexity Low_complexity 1 37 0 255 197 92 0 chr18 2465272 2465348 -84212200 - L1MCc LINE L1 -4137 2804 2722 258 121 44 66 chr18 2465364 2465546 -84212002 + (TA)n Simple_repeat Simple_repeat 1 178 0 2672 221 129 80 chr18 2465591 2466471 -84211077 - L1MCc LINE L1 -4346 2776 1941 189 0 0 0 chr18 2466471 2466492 -84211056 + (TC)n Simple_repeat Simple_repeat 2 22 0 2672 221 129 80 chr18 2466492 2466612 -84210936 - L1MCc LINE L1 -5181 1941 1828 2106 133 0 3 chr18 2466612 2466912 -84210636 - AluSx SINE Alu -13 299 1 2672 221 129 80 chr18 2466912 2468140 -84209408 - L1MCc LINE L1 -5294 1828 7 709 300 67 0 chr18 2468967 2469190 -84208358 + MIR SINE MIR 19 256 -6 546 202 128 0 chr18 2469634 2469743 -84207805 + FLAM_A SINE Alu 1 123 -10 277 265 92 41 chr18 2470245 2470343 -84207205 - MIR SINE MIR -64 144 42 1719 261 131 2 chr18 2471881 2472386 -84205162 - MLT1E2 LTR MaLR -26 600 31 26 30 0 0 chr18 2472821 2472854 -84204694 + AT_rich Low_complexity Low_complexity 1 33 0 326 286 71 0 chr18 2473969 2474095 -84203453 + MIR SINE MIR 78 212 -50 853 186 19 48 chr18 2474118 2474328 -84203220 + L1MA9 LINE L1 6075 6278 -34 677 288 64 29 chr18 2474915 2475196 -84202352 + MLT1I LTR MaLR 81 371 -38 319 290 137 7 chr18 2475643 2475943 -84201605 - L1ME LINE L1 -4969 1415 1077 398 314 131 21 chr18 2475953 2475964 -84201584 - L1ME LINE L1 -5175 1197 1189 2249 109 3 0 chr18 2475964 2476276 -84201272 - AluSq SINE Alu 0 313 1 398 314 131 21 chr18 2476276 2476592 -84200956 - L1ME LINE L1 -5183 1189 834 25 0 0 0 chr18 2478172 2478197 -84199351 + AT_rich Low_complexity Low_complexity 1 25 0 32 0 0 0 chr18 2479129 2479161 -84198387 + AT_rich Low_complexity Low_complexity 1 32 0 1520 273 32 38 chr18 2479217 2479723 -84197825 + L2 LINE L2 2127 2629 -685 649 243 14 0 chr18 2479743 2479883 -84197665 - MLT1D LTR MaLR -1 504 363 306 330 62 22 chr18 2479887 2480066 -84197482 - L1ME LINE L1 -458 5663 5478 2647 14 0 0 chr18 2480559 2480851 -84196697 - AluYa5 SINE Alu -19 292 1 295 311 138 54 chr18 2482807 2483177 -84194371 + L2 LINE L2 2863 3263 -9 1399 143 136 4 chr18 2484605 2484884 -84192664 - MER2 DNA MER2_type -14 331 16 228 35 0 0 chr18 2484960 2484989 -84192559 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2001 112 3 11 chr18 2485002 2485287 -84192261 - AluSq SINE Alu -30 283 1 2432 77 0 13 chr18 2485914 2486227 -84191321 - AluSc SINE Alu 0 309 1 638 265 66 0 chr18 2486410 2486576 -84190972 + MLT1I LTR MaLR 3 179 -230 644 303 50 17 chr18 2487502 2487862 -84189686 + L1MDb LINE L1 794 1165 -5244 850 263 111 5 chr18 2487863 2488080 -84189468 + MLT1I LTR MaLR 170 409 0 23 33 0 0 chr18 2490383 2490413 -84187135 + AT_rich Low_complexity Low_complexity 1 30 0 1853 70 8 0 chr18 2490541 2490785 -84186763 + L1PA10 LINE L1 5919 6164 -4 2090 121 14 10 chr18 2491907 2492204 -84185344 + AluSg SINE Alu 3 300 -10 1660 260 43 57 chr18 2493679 2494280 -84183268 - MLT1E LTR MaLR 0 593 1 684 316 134 25 chr18 2495563 2495997 -84181551 + L2 LINE L2 2830 3310 -3 398 242 63 11 chr18 2496608 2496703 -84180845 + MIR SINE MIR 42 141 -67 663 348 27 47 chr18 2499737 2500180 -84177368 + LTR16A LTR ERVL 17 450 0 2057 107 47 0 chr18 2500570 2500869 -84176679 + AluSp SINE Alu 1 313 0 359 323 108 11 chr18 2502082 2502268 -84175280 + MIR SINE MIR 1 204 -58 234 0 0 0 chr18 2502333 2502359 -84175189 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 211 250 190 20 chr18 2502359 2502453 -84175095 - L2 LINE L2 -13 3300 3190 419 270 16 16 chr18 2502644 2502830 -84174718 - MER41B LTR ERV1 -205 430 112 820 256 134 13 chr18 2503030 2503444 -84174104 - L2 LINE L2 -225 3088 2635 1873 107 3 85 chr18 2503763 2504082 -84173466 - MER4A LTR ERV1 0 664 372 554 67 100 11 chr18 2504133 2504223 -84173325 - MER4A LTR ERV1 -566 98 1 3727 132 28 56 chr18 2504224 2504943 -84172605 - LTR34 LTR ERV1 0 699 1 1405 224 123 55 chr18 2505361 2505928 -84171620 - MER50 LTR ERV1 -48 686 81 2514 153 92 2 chr18 2505965 2506167 -84171381 - MER41C LTR ERV1 -77 477 294 2267 100 0 3 chr18 2506167 2506466 -84171082 - AluSc SINE Alu -11 298 1 2514 153 92 2 chr18 2506466 2506700 -84170848 - MER41C LTR ERV1 -260 294 2 335 384 29 14 chr18 2506875 2507013 -84170535 - MIR SINE MIR -111 151 12 317 349 9 9 chr18 2507017 2507126 -84170422 - MIR SINE MIR -106 156 48 21 71 0 0 chr18 2508064 2508106 -84169442 + AT_rich Low_complexity Low_complexity 1 42 0 439 276 61 91 chr18 2508858 2509550 -84167998 + L1MEd LINE L1 563 1233 -4886 23 0 0 0 chr18 2509958 2509981 -84167567 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr18 2510171 2510196 -84167352 + AT_rich Low_complexity Low_complexity 1 25 0 2076 250 65 30 chr18 2510205 2511571 -84165977 + L1MA8 LINE L1 467 2976 -4520 1469 203 39 13 chr18 2511577 2512149 -84165399 + L1MA8 LINE L1 3298 3890 -3675 * 5237 157 23 30 chr18 2512124 2513338 -84164210 + L1MA8 LINE L1 6511 7709 -1 530 282 192 25 chr18 2513639 2514161 -84163387 + L1M4 LINE L1 2230 2838 -3308 387 321 36 7 chr18 2514236 2514376 -84163172 - L2 LINE L2 -25 3288 3145 24 0 0 0 chr18 2514908 2514932 -84162616 + AT_rich Low_complexity Low_complexity 1 24 0 2150 126 3 3 chr18 2515006 2515308 -84162240 - AluSx SINE Alu -10 302 1 720 212 47 12 chr18 2516049 2516219 -84161329 + MIR SINE MIR 5 180 -82 778 157 6 54 chr18 2516661 2516827 -84160721 - MER3 DNA MER1_type 0 209 52 288 200 0 0 chr18 2517798 2517858 -84159690 + (ATG)n Simple_repeat Simple_repeat 1 60 0 184 322 46 11 chr18 2517858 2517945 -84159603 - MIR SINE MIR -96 112 23 180 77 0 0 chr18 2519303 2519329 -84158219 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 2612 45 0 0 chr18 2521363 2521672 -84155876 + AluY SINE Alu 1 309 -2 208 148 0 37 chr18 2521763 2521817 -84155731 + (TA)n Simple_repeat Simple_repeat 2 53 0 193 167 39 39 chr18 2521871 2521973 -84155575 + (TA)n Simple_repeat Simple_repeat 2 103 0 262 193 37 22 chr18 2522065 2522200 -84155348 + (TA)n Simple_repeat Simple_repeat 1 137 0 330 240 202 10 chr18 2522732 2522836 -84154712 + L2 LINE L2 3190 3313 0 1837 35 0 4 chr18 2523731 2523959 -84153589 + L1PA4 LINE L1 5926 6152 -3 225 0 0 0 chr18 2523969 2523994 -84153554 + (CA)n Simple_repeat Simple_repeat 2 26 0 230 81 27 0 chr18 2524115 2524152 -84153396 + (CAAAAA)n Simple_repeat Simple_repeat 5 42 0 397 266 69 9 chr18 2524475 2524636 -84152912 - L1ME3A LINE L1 -318 5852 5680 261 303 18 18 chr18 2525160 2525269 -84152279 + L1ME LINE L1 351 459 -5937 3433 236 83 30 chr18 2525948 2527594 -84149954 + L1ME LINE L1 770 2516 -3890 2631 259 32 15 chr18 2527610 2528590 -84148958 + L1ME LINE L1 2562 3557 -2849 1670 65 0 5 chr18 2529321 2529536 -84148012 + L1P4 LINE L1 5448 5661 -507 2650 92 8 21 chr18 2529536 2529857 -84147691 + THE1C LTR MaLR 1 318 -57 419 137 55 0 chr18 2529857 2529930 -84147618 + MADE1 DNA Mariner 2 78 -2 2650 92 8 21 chr18 2529930 2529988 -84147560 + THE1C LTR MaLR 318 375 0 3457 92 22 10 chr18 2529988 2530488 -84147060 + L1PA13 LINE L1 5657 6162 -1 31 0 0 0 chr18 2531004 2531035 -84146513 + AT_rich Low_complexity Low_complexity 1 31 0 258 353 78 17 chr18 2531175 2531407 -84146141 + L3 LINE CR1 126 371 -1206 580 327 54 30 chr18 2531433 2531769 -84145779 + L2 LINE L2 2970 3313 0 379 321 179 47 chr18 2531771 2532179 -84145369 - L3 LINE CR1 -9 1568 1107 415 302 67 7 chr18 2532417 2532566 -84144982 - L3 LINE CR1 -578 999 842 411 331 169 10 chr18 2532769 2533077 -84144471 + L3 LINE CR1 887 1243 -334 194 274 39 0 chr18 2533196 2533247 -84144301 + MIR SINE MIR 80 132 -130 * 220 264 282 18 chr18 2533245 2533355 -84144193 - L2 LINE L2 0 3272 3134 392 364 26 7 chr18 2533448 2533599 -84143949 + L3 LINE CR1 1387 1540 -37 490 266 67 77 chr18 2534142 2534623 -84142925 + L1MC5 LINE L1 7310 7785 -176 362 293 57 8 chr18 2535525 2535648 -84141900 + L2 LINE L2 3185 3313 0 1440 111 11 0 chr18 2535654 2535843 -84141705 + AluSc SINE Alu 87 277 -32 459 0 0 0 chr18 2535843 2535894 -84141654 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 275 120 0 11 chr18 2535952 2536008 -84141540 - MLT2B2 LTR ERVL -340 57 4 610 167 0 0 chr18 2536108 2536204 -84141344 + MLT2B2 LTR ERVL 349 444 -71 366 159 0 0 chr18 2536221 2536290 -84141258 + (TA)n Simple_repeat Simple_repeat 2 70 0 353 140 0 0 chr18 2536290 2536347 -84141201 + MLT2B1 LTR ERVL 464 520 0 233 220 11 99 chr18 2536396 2536487 -84141061 + L1ME3 LINE L1 5978 6060 -102 24 32 0 0 chr18 2536583 2536614 -84140934 + AT_rich Low_complexity Low_complexity 1 31 0 1789 296 85 19 chr18 2538589 2539857 -84137691 - L1ME3A LINE L1 -168 6002 4652 992 340 38 25 chr18 2540618 2541091 -84136457 + L1M3c LINE L1 141 619 -5662 2462 211 40 52 chr18 2541097 2541350 -84136198 + L1M3c LINE L1 951 1205 -5146 1796 183 3 0 chr18 2541350 2541661 -84135887 + AluJb SINE Alu 1 312 0 2462 211 40 52 chr18 2541661 2541765 -84135783 + L1M3c LINE L1 1205 1309 -5042 1945 146 3 0 chr18 2541765 2542053 -84135495 + AluSq SINE Alu 1 289 -24 2462 211 40 52 chr18 2542053 2542768 -84134780 + L1M3c LINE L1 1309 1986 -4365 3672 101 0 2 chr18 2542768 2543281 -84134267 + L1PB1 LINE L1 5640 6151 0 417 194 31 0 chr18 2543471 2543569 -84133979 + L1M1 LINE L1 2898 2998 -4567 7697 65 30 2 chr18 2543595 2543891 -84133657 - LTR13 LTR ERVK 0 1007 721 212 0 36 0 chr18 2543891 2543919 -84133629 + (GA)n Simple_repeat Simple_repeat 2 30 0 7697 65 30 2 chr18 2543919 2544599 -84132949 - LTR13 LTR ERVK -286 721 4 1897 110 65 0 chr18 2544599 2544862 -84132686 - AluSp SINE Alu -33 280 1 245 332 13 13 chr18 2544863 2545092 -84132456 + L1M1 LINE L1 2992 3220 -4345 446 108 14 0 chr18 2545135 2545209 -84132339 + L1MA10 LINE L1 6253 6327 -7 525 279 98 58 chr18 2545211 2545710 -84131838 + L1ME3A LINE L1 965 1483 -4913 792 280 0 0 chr18 2545724 2545899 -84131649 + FAM SINE Alu 1 175 0 245 307 100 0 chr18 2545905 2546045 -84131503 + HAL1 LINE L1 1494 1647 -860 21 36 0 0 chr18 2546176 2546204 -84131344 + AT_rich Low_complexity Low_complexity 1 28 0 225 139 0 0 chr18 2546621 2546664 -84130884 + (T)n Simple_repeat Simple_repeat 1 43 0 1142 273 60 22 chr18 2547574 2548463 -84129085 + L1ME3A LINE L1 2456 5318 -897 319 218 0 0 chr18 2548469 2548547 -84129001 + L1ME3A LINE L1 5460 5537 -696 507 235 49 49 chr18 2548553 2548757 -84128791 + L1ME3A LINE L1 6035 6238 -1 465 283 59 32 chr18 2550919 2551054 -84126494 + L2 LINE L2 2287 2432 -882 2565 127 102 2 chr18 2551054 2551495 -84126053 - LTR19A LTR ERV1 0 486 2 465 283 59 32 chr18 2551495 2551578 -84125970 + L2 LINE L2 2432 2511 -803 369 0 0 0 chr18 2553629 2553670 -84123878 + (CA)n Simple_repeat Simple_repeat 2 42 0 1524 154 0 0 chr18 2554540 2554774 -84122774 - AluJo SINE Alu -46 266 33 505 267 49 80 chr18 2555102 2555202 -84122346 - MIR SINE MIR -27 235 133 2172 105 0 14 chr18 2555202 2555498 -84122050 - AluSx SINE Alu -20 292 1 505 267 49 80 chr18 2555498 2555622 -84121926 - MIR SINE MIR -129 133 18 278 316 165 39 chr18 2556319 2556525 -84121023 - L2 LINE L2 -9 3263 3032 1252 211 66 37 chr18 2556861 2557240 -84120308 - MLT1D LTR MaLR -115 390 1 8387 155 45 4 chr18 2558035 2560559 -84116989 + L1PB1 LINE L1 1297 3922 -2940 41106 29 22 3 chr18 2560563 2566592 -84110956 + L1PA2 LINE L1 1 6151 -4 8939 188 19 2 chr18 2566578 2569552 -84107996 + L1PB1 LINE L1 3843 6865 -2 * 350 310 88 93 chr18 2569627 2569991 -84107557 - L2 LINE L2 -5 3267 2906 2811 169 36 55 chr18 2570316 2571008 -84106540 + L1MA8 LINE L1 5613 6291 0 1619 154 53 36 chr18 2571603 2571959 -84105589 - THE1C LTR MaLR -10 365 4 330 246 53 35 chr18 2572444 2572558 -84104990 + L2 LINE L2 2096 2211 -1103 410 321 97 20 chr18 2572778 2573127 -84104421 + L1M4 LINE L1 2457 2832 -3314 329 396 24 28 chr18 2573251 2573463 -84104085 + L1MEd LINE L1 10 220 -5899 387 300 76 38 chr18 2574136 2574399 -84103149 + L1M4 LINE L1 3791 4063 -2083 476 170 245 0 chr18 2574542 2574648 -84102900 - FLAM_A SINE Alu 0 133 2 935 338 119 15 chr18 2574653 2575431 -84102117 + L2 LINE L2 2451 3309 -4 451 248 425 0 chr18 2575438 2575664 -84101884 + MER5C DNA MER1_type 2 323 -1 212 344 70 23 chr18 2575722 2575850 -84101698 - L2 LINE L2 0 3313 3180 1870 174 0 7 chr18 2575962 2576272 -84101276 + AluJo SINE Alu 1 308 -4 521 280 68 17 chr18 2576548 2576784 -84100764 + MLT1I LTR MaLR 114 361 -48 1196 201 38 44 chr18 2577702 2578041 -84099507 + MLT1A1 LTR MaLR 29 365 0 2065 130 0 40 chr18 2578420 2578743 -84098805 - AluSx SINE Alu -1 311 2 2517 122 28 25 chr18 2578805 2579238 -84098310 + Tigger2a DNA MER2_type 1 434 0 24 0 0 0 chr18 2579808 2579832 -84097716 + AT_rich Low_complexity Low_complexity 1 24 0 214 259 0 19 chr18 2580066 2580120 -84097428 + GA-rich Low_complexity Low_complexity 2 54 0 343 289 79 18 chr18 2580399 2580513 -84097035 - L2 LINE L2 -25 3288 3168 429 301 139 0 chr18 2580850 2581023 -84096525 + MIR SINE MIR 56 252 -10 287 210 67 109 chr18 2582411 2582482 -84095066 - MIR SINE MIR -108 154 88 2399 76 0 0 chr18 2582482 2582784 -84094764 - AluY SINE Alu -3 308 7 287 210 67 109 chr18 2582784 2582831 -84094717 - MIR SINE MIR -174 88 41 274 369 39 0 chr18 2583076 2583206 -84094342 - MIR SINE MIR -108 154 20 1305 254 16 22 chr18 2584179 2584545 -84093003 + MLT1A1 LTR MaLR 1 364 -1 32 81 0 0 chr18 2585110 2585184 -84092364 + AT_rich Low_complexity Low_complexity 1 74 0 411 282 153 24 chr18 2585224 2585433 -84092115 - MIR SINE MIR -26 236 1 350 271 121 39 chr18 2585441 2585648 -84091900 + L1ME LINE L1 5563 5786 -335 799 158 0 64 chr18 2586375 2586546 -84091002 + L1PB4 LINE L1 5997 6156 0 209 316 61 0 chr18 2586772 2586870 -84090678 - L2 LINE L2 -641 2673 2570 213 287 158 20 chr18 2586905 2587006 -84090542 + L2 LINE L2 3197 3311 -2 2276 140 62 2 chr18 2587044 2587444 -84090104 - MSTA LTR MaLR -4 424 1 2217 110 0 0 chr18 2588415 2588705 -84088843 - AluSg SINE Alu -20 290 1 21 0 0 0 chr18 2588723 2588744 -84088804 + AT_rich Low_complexity Low_complexity 1 21 0 2224 104 0 16 chr18 2589292 2589599 -84087949 + AluSx SINE Alu 1 302 -10 375 267 0 0 chr18 2590311 2590401 -84087147 + L1MC4 LINE L1 6614 6703 -1339 305 244 49 0 chr18 2590432 2590514 -84087034 - L1MC4 LINE L1 -1340 6702 6617 200 238 0 0 chr18 2590515 2590557 -84086991 + (TA)n Simple_repeat Simple_repeat 2 43 0 186 43 0 0 chr18 2590768 2590791 -84086757 + (TA)n Simple_repeat Simple_repeat 2 24 0 265 324 28 9 chr18 2591331 2591439 -84086109 - MIR SINE MIR -107 155 46 267 291 39 0 chr18 2591474 2591577 -84085971 + MIR SINE MIR 104 210 -52 1525 192 3 0 chr18 2591582 2591874 -84085674 - L1MB1 LINE L1 -120 6069 5777 1392 139 12 28 chr18 2591905 2592157 -84085391 + L1MA10 LINE L1 6080 6327 -7 247 279 48 48 chr18 2592198 2592302 -84085246 - L2 LINE L2 -1 3271 3168 2212 80 0 0 chr18 2592511 2592787 -84084761 + AluSc SINE Alu 21 296 -13 21 36 0 0 chr18 2592793 2592821 -84084727 + AT_rich Low_complexity Low_complexity 1 28 0 2223 111 0 10 chr18 2594142 2594440 -84083108 + AluSx SINE Alu 1 295 -17 1720 219 11 0 chr18 2595039 2595418 -84082130 - MER89 LTR ERV1 -2 557 175 363 148 25 12 chr18 2595445 2595526 -84082022 - MER89 LTR ERV1 -477 82 1 1864 152 24 7 chr18 2595581 2595878 -84081670 - AluJb SINE Alu -5 307 6 2268 108 10 0 chr18 2596219 2596526 -84081022 - AluSp SINE Alu -3 310 1 195 257 59 37 chr18 2596676 2596812 -84080736 + L2 LINE L2 2738 2876 -438 212 313 45 0 chr18 2597176 2597243 -84080305 + MIR SINE MIR 111 180 -82 208 247 99 37 chr18 2597388 2597469 -84080079 - MIR SINE MIR -73 189 104 946 285 81 67 chr18 2598404 2598541 -84079007 - MER115 DNA AcHobo 0 693 559 2479 56 0 7 chr18 2598541 2598844 -84078704 - AluY SINE Alu -10 301 1 946 285 81 67 chr18 2598844 2599198 -84078350 - MER115 DNA AcHobo -134 559 195 577 283 109 18 chr18 2599201 2599477 -84078071 - MER115 DNA AcHobo -379 314 14 6087 93 8 0 chr18 2599939 2601323 -84076225 - L1PA13 LINE L1 0 6163 4784 10116 208 40 10 chr18 2601327 2605296 -84072252 - L1PB1 LINE L1 0 6867 2620 2129 118 109 0 chr18 2605297 2605637 -84071911 + MER51B LTR ERV1 1 377 0 2659 83 25 18 chr18 2605641 2606038 -84071510 + MER51B-int LTR ERV1 5 404 -7412 263 150 62 0 chr18 2606045 2606125 -84071423 + (TA)n Simple_repeat Simple_repeat 2 86 0 386 123 62 0 chr18 2606128 2606193 -84071355 + MER51B-int LTR ERV1 423 491 -7325 2545 160 21 5 chr18 2606196 2606752 -84070796 - L1PB1 LINE L1 -5062 1801 1093 3527 208 93 8 chr18 2606755 2607715 -84069833 - L1PB1 LINE L1 -5817 1046 6 7198 162 7 8 chr18 2607730 2609073 -84068475 - L1P LINE L1 -1346 4800 3460 5175 134 25 8 chr18 2609067 2610011 -84067537 + L1MA5A LINE L1 5331 6290 -7 * 6158 186 24 32 chr18 2610020 2610166 -84067382 + L1MC1 LINE L1 4156 4302 -2031 2300 149 20 10 chr18 2610166 2610561 -84066987 + MER57A LTR ERV1 1 399 -4 6158 186 24 32 chr18 2610561 2610734 -84066814 + L1MC1 LINE L1 4302 4475 -1858 1700 109 0 4 chr18 2610734 2610963 -84066585 + AluSg/x SINE Alu 83 310 0 6158 186 24 32 chr18 2610963 2612850 -84064698 + L1MC1 LINE L1 4475 6332 -1 325 299 47 0 chr18 2612859 2612966 -84064582 + L1MDa LINE L1 1574 1685 -4855 2289 122 3 0 chr18 2613013 2613325 -84064223 + AluSq SINE Alu 1 313 0 818 221 20 39 chr18 2613361 2613660 -84063888 + L1M1 LINE L1 3469 3799 -3900 1534 192 49 88 chr18 2614310 2614821 -84062727 + MLT1D LTR MaLR 7 497 -8 2994 163 140 28 chr18 2615210 2615930 -84061618 + L1MB4 LINE L1 5335 6135 -45 271 268 175 41 chr18 2615963 2616060 -84061488 - L2 LINE L2 -1 3271 3162 2181 142 99 67 chr18 2616263 2616813 -84060735 + LTR10A LTR ERV1 1 612 -21 1806 137 11 15 chr18 2616905 2617176 -84060372 + AluJb SINE Alu 38 307 -5 242 247 21 86 chr18 2619503 2619596 -84057952 - MIR SINE MIR -97 111 25 239 274 19 0 chr18 2620897 2621003 -84056545 + L1ME4a LINE L1 6010 6117 -4 1999 177 98 3 chr18 2621120 2621509 -84056039 + MSTB LTR MaLR 1 426 0 275 0 29 0 chr18 2621568 2621603 -84055945 + (TC)n Simple_repeat Simple_repeat 1 36 0 347 195 297 17 chr18 2622164 2622282 -84055266 + MER5A DNA MER1_type 39 189 0 575 259 91 20 chr18 2622841 2623038 -84054510 - MIR SINE MIR -3 259 49 209 342 128 7 chr18 2623773 2623922 -84053626 + MIR SINE MIR 86 252 -10 2467 195 38 4 chr18 2624316 2624838 -84052710 + LTR9B LTR ERV1 105 644 0 1770 141 89 0 chr18 2624905 2625175 -84052373 + AluJb SINE Alu 3 296 -16 207 0 0 0 chr18 2625175 2625198 -84052350 + (TA)n Simple_repeat Simple_repeat 1 23 0 346 179 53 42 chr18 2625518 2625603 -84051945 + MER34C LTR ERV1 37 125 -460 1597 201 0 49 chr18 2625603 2625927 -84051621 + AluJo SINE Alu 1 308 -4 231 204 0 0 chr18 2625946 2625995 -84051553 + GA-rich Low_complexity Low_complexity 1 49 0 2961 149 8 0 chr18 2625995 2626497 -84051051 + MER34B LTR ERV1 60 565 0 635 233 7 0 chr18 2626985 2627131 -84050417 + L1MD3 LINE L1 6696 6842 -1153 540 264 21 10 chr18 2627377 2627570 -84049978 + L1MD3 LINE L1 7775 7969 -26 1566 208 15 23 chr18 2628573 2628972 -84048576 + L1MB3 LINE L1 4523 4918 -1228 1141 196 4 4 chr18 2628972 2629207 -84048341 + L1MB3 LINE L1 5621 5855 -328 25 51 0 0 chr18 2629241 2629280 -84048268 + AT_rich Low_complexity Low_complexity 1 39 0 1714 177 20 0 chr18 2629280 2629580 -84047968 - L1PA16 LINE L1 -13 6153 5848 1088 128 21 5 chr18 2629580 2629767 -84047781 + L1MB3 LINE L1 5845 6034 -149 397 39 0 0 chr18 2629867 2629919 -84047629 - MER51B LTR ERV1 -323 54 3 298 254 217 81 chr18 2629921 2630209 -84047339 - L2 LINE L2 -32 3240 2886 3114 165 17 4 chr18 2630209 2630748 -84046800 - MER44D DNA MER2_type -3 602 2 298 254 217 81 chr18 2630748 2630841 -84046707 - L2 LINE L2 -386 2886 2807 15863 30 4 0 chr18 2631982 2634088 -84043460 - L1P2 LINE L1 -644 5511 3399 5449 176 25 31 chr18 2634188 2634720 -84042828 - L1M1 LINE L1 -5663 1902 1378 2175 74 17 30 chr18 2634720 2635019 -84042529 + AluSp SINE Alu 16 310 -3 5449 176 25 31 chr18 2635019 2635548 -84042000 - L1M1 LINE L1 -6187 1378 847 23 0 0 0 chr18 2635656 2635679 -84041869 + AT_rich Low_complexity Low_complexity 1 23 0 448 270 44 15 chr18 2635846 2635983 -84041565 - MIR SINE MIR -89 173 33 547 199 6 68 chr18 2636798 2636959 -84040589 + L1ME3 LINE L1 5924 6074 -88 345 314 51 0 chr18 2638792 2638910 -84038638 + MIR SINE MIR 38 161 -101 * 558 248 140 28 chr18 2638905 2639119 -84038429 - MIR SINE MIR 0 262 25 229 313 27 27 chr18 2639069 2639181 -84038367 + MIR SINE MIR 130 241 -21 * 1085 244 10 0 chr18 2639465 2639773 -84037775 - L1MA4 LINE L1 -1 6299 5989 1915 62 22 15 chr18 2640315 2640588 -84036960 + LTR30 LTR ERV1 1 275 -447 2382 80 0 3 chr18 2640718 2641019 -84036529 - AluSq SINE Alu -13 300 1 288 0 0 0 chr18 2642380 2642412 -84035136 + (CA)n Simple_repeat Simple_repeat 2 33 0 796 283 24 60 chr18 2642431 2642600 -84034948 - MIR SINE MIR 0 262 103 2358 96 0 0 chr18 2642600 2642893 -84034655 - AluSx SINE Alu -17 295 3 796 283 24 60 chr18 2642893 2642974 -84034574 - MIR SINE MIR -159 103 21 198 0 0 0 chr18 2643064 2643086 -84034462 + (TTA)n Simple_repeat Simple_repeat 3 24 0 4921 35 2 0 chr18 2643086 2643666 -84033882 - L1PA3 LINE L1 -18 6137 5557 913 44 0 0 chr18 2643666 2643780 -84033768 + L1P LINE L1 4820 4933 -1213 21 0 0 0 chr18 2645136 2645157 -84032391 + AT_rich Low_complexity Low_complexity 1 21 0 233 234 103 9 chr18 2645173 2645280 -84032268 - L1ME4a LINE L1 -15 6106 5990 492 300 56 35 chr18 2645459 2645492 -84032056 + MLT1G1 LTR MaLR 1 32 -563 2964 107 9 5 chr18 2645492 2645924 -84031624 - MER57B LTR ERV1 0 434 1 492 300 56 35 chr18 2645924 2646167 -84031381 + MLT1G1 LTR MaLR 32 328 -267 280 233 44 11 chr18 2646249 2646339 -84031209 + MLT1H1 LTR MaLR 463 590 0 412 316 39 12 chr18 2646362 2646618 -84030930 - L1ME4a LINE L1 -287 5834 5572 216 365 83 16 chr18 2647038 2647230 -84030318 - L2 LINE L2 -56 3216 3012 228 235 20 0 chr18 2648136 2648187 -84029361 + CT-rich Low_complexity Low_complexity 1 52 0 2167 125 0 0 chr18 2649109 2649404 -84028144 - AluSq SINE Alu -18 295 1 1783 162 61 29 chr18 2649523 2650061 -84027487 + MLT2A2 LTR ERVL 1 554 0 22 0 0 0 chr18 2650241 2650263 -84027285 + AT_rich Low_complexity Low_complexity 1 22 0 272 292 34 22 chr18 2650330 2650419 -84027129 - MIR SINE MIR -120 142 53 1537 152 22 90 chr18 2651293 2651616 -84025932 - AluJo SINE Alu -7 305 5 346 266 2 23 chr18 2651682 2651795 -84025753 - MIR3 SINE MIR -45 163 82 1823 171 9 22 chr18 2652217 2652533 -84025015 + AluJo SINE Alu 1 312 0 431 233 93 20 chr18 2652754 2652904 -84024644 + MER58A DNA MER1_type 9 169 -55 2523 171 14 0 chr18 2653263 2653683 -84023865 + MSTB LTR MaLR 1 426 0 1005 297 155 10 chr18 2654045 2654789 -84022759 - L2 LINE L2 0 3313 2458 377 264 139 26 chr18 2654919 2655222 -84022326 + L1MC4a LINE L1 5899 6235 -1573 2234 102 3 26 chr18 2655369 2655672 -84021876 - AluSx SINE Alu -16 296 1 780 251 96 73 chr18 2655902 2656253 -84021295 + L1MC5 LINE L1 6632 7002 -959 1693 189 144 40 chr18 2656253 2656724 -84020824 - MLT2B1 LTR ERVL 0 520 1 780 251 96 73 chr18 2656724 2656934 -84020614 + L1MC5 LINE L1 7002 7206 -755 897 228 22 5 chr18 2656934 2657158 -84020390 + MER58 DNA MER1_type 1 228 -2192 257 167 0 0 chr18 2657283 2657331 -84020217 - MER5C DNA MER1_type -200 124 77 2140 141 0 0 chr18 2657609 2657908 -84019640 - AluSx SINE Alu -8 304 6 5164 140 10 15 chr18 2658178 2659054 -84018494 + Tigger1 DNA MER2_type 1 872 -1546 4081 161 10 4 chr18 2659062 2659753 -84017795 + MER50 LTR ERV1 17 711 -23 8766 139 33 2 chr18 2659753 2661257 -84016291 + Tigger1 DNA MER2_type 868 2418 0 603 220 47 37 chr18 2662480 2662671 -84014877 + LTR45B LTR ERV1 296 488 -1 433 314 31 35 chr18 2663091 2663349 -84014199 - L2 LINE L2 -2409 905 649 723 162 0 0 chr18 2664041 2664158 -84013390 + AluSg/x SINE Alu 193 309 0 236 240 83 62 chr18 2664282 2664378 -84013170 - MLT1K LTR MaLR -371 217 120 1734 164 29 0 chr18 2665164 2665445 -84012103 + AluJb SINE Alu 1 289 -23 190 393 17 8 chr18 2667942 2668059 -84009489 + MIR SINE MIR 18 135 -127 1538 186 3 47 chr18 2669678 2669995 -84007553 + AluJb SINE Alu 5 307 -5 1330 217 37 34 chr18 2670112 2670494 -84007054 + L1M4 LINE L1 3775 4157 -1989 2256 101 3 0 chr18 2670550 2670847 -84006701 + AluY SINE Alu 1 298 -13 182 266 38 63 chr18 2671396 2671475 -84006073 - L2 LINE L2 -6 3307 3231 394 256 53 0 chr18 2671619 2671752 -84005796 + MER117 DNA MER1_type 1 140 -57 23 33 0 0 chr18 2672817 2672847 -84004701 + AT_rich Low_complexity Low_complexity 1 30 0 301 354 123 12 chr18 2673760 2674003 -84003545 - L2 LINE L2 -77 3195 2926 381 356 70 30 chr18 2674055 2674325 -84003223 - L2 LINE L2 -470 2844 2564 294 50 0 0 chr18 2674499 2674539 -84003009 + (TG)n Simple_repeat Simple_repeat 2 41 0 2016 107 52 0 chr18 2674791 2675136 -84002412 - LTR30 LTR ERV1 -1 721 359 1795 159 3 20 chr18 2675683 2675978 -84001570 - AluJo SINE Alu -19 293 4 288 0 0 0 chr18 2676335 2676367 -84001181 + (TAGA)n Simple_repeat Simple_repeat 2 33 0 939 246 23 19 chr18 2676418 2676682 -84000866 + MLT1L LTR MaLR 8 272 -343 355 87 29 0 chr18 2676692 2676761 -84000787 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 431 306 95 26 chr18 2677120 2677352 -84000196 + MIR SINE MIR 14 261 -1 2159 165 26 53 chr18 2677437 2677928 -83999620 - MER34B LTR ERV1 -77 488 11 6484 132 8 12 chr18 2679531 2680945 -83996603 + L1MA3 LINE L1 4887 6298 -7 381 196 24 173 chr18 2680974 2681142 -83996406 - LTR54 LTR ERV1 -229 281 139 257 179 18 0 chr18 2681133 2681189 -83996359 + LTR54 LTR ERV1 75 131 -379 * 415 165 0 24 chr18 2681258 2681343 -83996205 - LTR54B LTR ERV1 -415 83 1 1972 131 81 31 chr18 2681429 2681810 -83995738 + MSTA LTR MaLR 1 400 -28 2644 108 3 6 chr18 2681986 2682348 -83995200 - THE1B LTR MaLR -3 361 1 246 312 147 0 chr18 2682741 2682850 -83994698 + L2 LINE L2 3189 3313 0 634 233 17 6 chr18 2682907 2683084 -83994464 + MLT1E LTR MaLR 1 180 -387 289 136 0 0 chr18 2683085 2683129 -83994419 + MSTA LTR MaLR 385 428 0 9858 152 33 11 chr18 2684439 2686190 -83991358 - ERVL LTR ERVL -1458 4306 2517 597 311 43 0 chr18 2686190 2686444 -83991104 + L1MC4a LINE L1 5598 5862 -1946 264 132 0 19 chr18 2686610 2686663 -83990885 - MLT2B1 LTR ERVL -8 512 461 363 291 57 13 chr18 2687012 2687170 -83990378 + LTR16C LTR ERVL 327 491 0 463 220 139 19 chr18 2687281 2687490 -83990058 + L1MC5 LINE L1 7303 7536 -425 237 226 161 20 chr18 2687550 2687749 -83989799 + L1MC5 LINE L1 7634 7860 -101 991 216 38 0 chr18 2688093 2688329 -83989219 - L1 LINE L1 -978 5168 4924 210 284 0 30 chr18 2688598 2688665 -83988883 - MIR SINE MIR -12 250 186 1906 153 5 79 chr18 2688777 2689196 -83988352 - MLT1B LTR MaLR 0 390 3 216 0 0 0 chr18 2689917 2689941 -83987607 + (CA)n Simple_repeat Simple_repeat 1 24 0 327 211 0 0 chr18 2690416 2690487 -83987061 + MER116 DNA Mariner 9 79 -1 269 295 74 0 chr18 2693030 2693125 -83984423 - MIR SINE MIR -8 254 153 263 297 55 8 chr18 2693266 2693394 -83984154 - MLT1K LTR MaLR -151 437 304 239 245 61 0 chr18 2693472 2693570 -83983978 + L1M4 LINE L1 5041 5144 -1002 1015 179 37 31 chr18 2693764 2694278 -83983270 - L1ME LINE L1 -659 5507 4844 1530 183 36 57 chr18 2694283 2694671 -83982877 + MLT1B LTR MaLR 11 390 0 654 227 62 0 chr18 2694671 2694865 -83982683 - L1ME LINE L1 -1298 4848 4643 1696 32 0 27 chr18 2694968 2695188 -83982360 - L1PA2 LINE L1 0 6155 5942 1790 91 0 0 chr18 2695604 2695835 -83981713 - AluSg/x SINE Alu -12 297 67 658 193 50 7 chr18 2696078 2696218 -83981330 + MLT1C LTR MaLR 318 463 -4 2118 124 0 7 chr18 2696436 2696727 -83980821 + AluSx SINE Alu 7 295 -17 14096 180 6 8 chr18 2696820 2700708 -83976840 - L1PB1 LINE L1 -5 6146 2265 298 270 208 13 chr18 2701111 2701270 -83976278 + MIR SINE MIR 28 217 -45 2199 110 7 0 chr18 2703594 2703894 -83973654 + AluSp SINE Alu 1 302 -11 312 363 40 33 chr18 2703983 2704151 -83973397 + MIR3 SINE MIR 31 202 -6 5920 119 60 2 chr18 2704245 2705171 -83972377 - Tigger1 DNA MER2_type 0 2418 1439 4562 132 65 7 chr18 2705169 2705921 -83971627 - Tigger1 DNA MER2_type -1407 1011 216 * 1261 97 0 0 chr18 2705922 2706087 -83971461 + AluSp SINE Alu 148 312 -1 637 125 67 33 chr18 2706094 2706214 -83971334 - Tigger1 DNA MER2_type -2293 125 2 1006 269 71 51 chr18 2706431 2707017 -83970531 - MER21B LTR ERV1 -124 739 98 716 269 91 16 chr18 2707320 2707562 -83969986 + MIR SINE MIR 3 262 0 1126 157 10 0 chr18 2707623 2707820 -83969728 - L1PB4 LINE L1 -1 6155 5957 204 292 15 0 chr18 2707908 2707973 -83969575 + MIR3 SINE MIR 138 203 -5 339 377 35 52 chr18 2708895 2709264 -83968284 + L3 LINE CR1 407 769 -808 2777 212 93 19 chr18 2709277 2709995 -83967553 - LTR48 LTR ERV1 -16 771 1 428 327 31 13 chr18 2710017 2710243 -83967305 + L3 LINE CR1 792 1021 -556 265 105 0 0 chr18 2710792 2710830 -83966718 + MER34 LTR ERV1 10 47 -495 536 328 50 5 chr18 2711902 2712103 -83965445 + MIR SINE MIR 10 219 -43 2617 264 79 23 chr18 2712246 2713294 -83964254 - L2 LINE L2 -7 3306 2188 1918 190 77 8 chr18 2713300 2713664 -83963884 - MSTD LTR MaLR 0 396 8 664 223 189 4 chr18 2713677 2713910 -83963638 - L2 LINE L2 -1128 2186 1911 206 245 0 0 chr18 2715375 2715428 -83962120 - MIR SINE MIR -1 261 209 252 86 0 0 chr18 2715697 2715732 -83961816 + (TG)n Simple_repeat Simple_repeat 2 36 0 669 293 90 33 chr18 2716089 2716577 -83960971 + LTR33 LTR ERVL 4 519 -2 1335 145 60 4 chr18 2716824 2717059 -83960489 - Tigger7 DNA MER2_type -1 2486 2239 31 58 0 0 chr18 2717059 2717111 -83960437 + AT_rich Low_complexity Low_complexity 1 52 0 393 104 71 7 chr18 2717114 2717268 -83960280 + (TA)n Simple_repeat Simple_repeat 2 165 0 310 217 43 14 chr18 2717275 2717344 -83960204 - Tigger7 DNA MER2_type -268 71 1 319 364 38 15 chr18 2717713 2717845 -83959703 - L2 LINE L2 -5 3267 3133 230 355 121 49 chr18 2717943 2718208 -83959340 + L2 LINE L2 2550 2833 -481 1788 187 0 9 chr18 2718239 2718554 -83958994 + AluJo SINE Alu 1 312 0 1731 296 81 14 chr18 2718865 2718923 -83958625 + HAL1 LINE L1 60 113 -2394 1961 141 70 0 chr18 2718923 2719250 -83958298 + L1MC1 LINE L1 5984 6333 0 1731 296 81 14 chr18 2719250 2719627 -83957921 + HAL1 LINE L1 113 463 -2044 5029 50 3 0 chr18 2719627 2720248 -83957300 + L1PA6 LINE L1 5526 6148 -6 1731 296 81 14 chr18 2720248 2720890 -83956658 + HAL1 LINE L1 463 1237 -1270 * 7044 151 18 14 chr18 2720889 2723203 -83954345 + L1MA4A LINE L1 3973 6298 -5 265 146 0 0 chr18 2723198 2723253 -83954295 + L1MB4 LINE L1 6126 6180 0 * 557 200 90 75 chr18 2723262 2723462 -83954086 + HAL1 LINE L1 1886 2088 -419 1703 259 144 13 chr18 2723494 2724030 -83953518 - MER115 DNA AcHobo -1 692 87 663 235 78 95 chr18 2724099 2724443 -83953105 + HAL1 LINE L1 2106 2444 -63 2261 96 7 0 chr18 2724443 2724734 -83952814 + AluSx SINE Alu 1 293 -19 663 235 78 95 chr18 2724734 2724789 -83952759 + HAL1 LINE L1 2444 2498 -9 264 109 0 0 chr18 2725002 2725048 -83952500 - L1PA8 LINE L1 -2 6170 6125 430 276 9 84 chr18 2725068 2725282 -83952266 - L2 LINE L2 0 3313 3116 4196 154 60 18 chr18 2725657 2725702 -83951846 - MER4D LTR ERV1 -93 810 768 2293 96 0 7 chr18 2725702 2726004 -83951544 - AluSg SINE Alu -8 302 3 4196 154 60 18 chr18 2726004 2726735 -83950813 - MER4D LTR ERV1 -135 768 1 311 212 0 15 chr18 2726737 2726803 -83950745 + MER34B LTR ERV1 61 125 -440 370 216 114 0 chr18 2726844 2726932 -83950616 - MER39B LTR ERV1 0 653 556 186 43 0 0 chr18 2726932 2726955 -83950593 + (TTG)n Simple_repeat Simple_repeat 2 24 0 384 122 14 14 chr18 2726986 2727060 -83950488 - L1PA10 LINE L1 -3 6165 6092 889 96 0 0 chr18 2727060 2727185 -83950363 - L1PA10 LINE L1 -333 5841 5717 1723 169 7 14 chr18 2727193 2727488 -83950060 - AluJo SINE Alu -19 293 1 1206 108 22 0 chr18 2727489 2727674 -83949874 - MER39B LTR ERV1 -87 566 378 688 81 121 0 chr18 2727675 2727774 -83949774 - MER39B LTR ERV1 -542 111 1 589 244 22 97 chr18 2727774 2728179 -83949369 + MER34B LTR ERV1 169 542 0 253 310 235 26 chr18 2728443 2728711 -83948837 + L3 LINE CR1 1180 1503 -74 1806 98 9 112 chr18 2729074 2729412 -83948136 + AluSx SINE Alu 1 303 -9 644 249 59 82 chr18 2729444 2729742 -83947806 + HAL1b LINE L1 631 915 -433 2232 116 0 0 chr18 2729742 2730044 -83947504 + AluSx SINE Alu 1 302 -10 644 249 59 82 chr18 2730044 2730234 -83947314 + HAL1b LINE L1 915 1108 -240 200 159 0 23 chr18 2730901 2730945 -83946603 + GA-rich Low_complexity Low_complexity 2 44 0 4075 164 31 15 chr18 2730985 2731769 -83945779 + L1MB3 LINE L1 5387 6182 -1 261 208 13 20 chr18 2732460 2732609 -83944939 + (TA)n Simple_repeat Simple_repeat 1 148 0 1661 189 0 40 chr18 2732615 2732916 -83944632 - AluJo SINE Alu -22 290 2 26 0 0 0 chr18 2734122 2734148 -83943400 + AT_rich Low_complexity Low_complexity 1 26 0 406 234 76 27 chr18 2734179 2734363 -83943185 + L1ME4a LINE L1 5906 6098 -23 2234 116 3 3 chr18 2734798 2735109 -83942439 + AluSq SINE Alu 1 311 -2 251 243 108 36 chr18 2735531 2735642 -83941906 + MIR3 SINE MIR 67 185 -23 182 289 19 0 chr18 2736008 2736060 -83941488 - MIR3 SINE MIR -37 171 119 22 70 0 0 chr18 2736418 2736461 -83941087 + AT_rich Low_complexity Low_complexity 1 43 0 352 262 29 10 chr18 2736694 2736797 -83940751 - MIR SINE MIR 0 262 158 395 265 59 71 chr18 2737289 2737459 -83940089 - MIR SINE MIR -92 170 3 2114 56 7 24 chr18 2739000 2739318 -83938230 - AluY SINE Alu 0 313 1 352 364 24 6 chr18 2740521 2740686 -83936862 - MIR SINE MIR -20 242 75 5564 234 37 7 chr18 2740897 2742526 -83935022 + L1M4 LINE L1 2110 3786 -2360 1988 20 0 16 chr18 2742508 2742753 -83934795 + L1P LINE L1 2667 2907 -3239 * 1828 85 0 0 chr18 2742991 2743252 -83934296 + AluY SINE Alu 47 307 0 598 300 0 50 chr18 2745484 2745664 -83931884 - MIR3 SINE MIR -22 186 16 2203 264 113 18 chr18 2745739 2746847 -83930701 - L2 LINE L2 0 3313 2098 543 278 46 78 chr18 2746973 2747279 -83930269 + MARNA DNA Mariner 240 535 -51 697 274 56 26 chr18 2747307 2747541 -83930007 - MIR SINE MIR -4 258 18 2023 93 9 74 chr18 2748296 2748619 -83928929 - AluSq SINE Alu -11 302 1 318 276 71 24 chr18 2749346 2749473 -83928075 - MIR SINE MIR -110 152 20 490 254 70 10 chr18 2750437 2750638 -83926910 - MER20B DNA MER1_type -35 748 536 247 349 37 0 chr18 2750619 2750728 -83926820 - MER20B DNA MER1_type -640 143 31 * 411 314 20 26 chr18 2750759 2750912 -83926636 - L2 LINE L2 -566 2748 2597 2770 21 0 0 chr18 2751690 2752027 -83925521 - L1P LINE L1 -767 5379 5043 2295 95 0 3 chr18 2753692 2753998 -83923550 - AluSq SINE Alu -8 305 1 21 0 0 0 chr18 2754477 2754498 -83923050 + AT_rich Low_complexity Low_complexity 1 21 0 374 268 179 17 chr18 2754909 2755088 -83922460 - MLT1K LTR MaLR -7 581 374 369 159 0 0 chr18 2755733 2755796 -83921752 - Alu SINE Alu 0 300 238 2117 86 50 0 chr18 2755847 2756127 -83921421 - AluSq SINE Alu -19 294 1 290 0 29 0 chr18 2757690 2757725 -83919823 + MLT2B2 LTR ERVL 480 515 0 194 297 20 50 chr18 2757944 2758045 -83919503 + MIR SINE MIR 114 211 -51 211 361 128 53 chr18 2759165 2759298 -83918250 - L2 LINE L2 -30 3242 3100 236 244 87 87 chr18 2760686 2760801 -83916747 - L2 LINE L2 -21 3292 3178 1972 124 14 3 chr18 2762982 2763272 -83914276 - AluSq SINE Alu -20 293 1 378 0 0 0 chr18 2763364 2763406 -83914142 + (TG)n Simple_repeat Simple_repeat 2 43 0 475 330 62 10 chr18 2763999 2764308 -83913240 + L1ME4a LINE L1 5572 5896 -225 429 158 137 11 chr18 2764739 2764834 -83912714 - L1MC1 LINE L1 -207 6126 6020 328 290 0 20 chr18 2764828 2764928 -83912620 - HAL1 LINE L1 -2273 234 137 * 22 0 0 0 chr18 2764939 2764961 -83912587 + AT_rich Low_complexity Low_complexity 1 22 0 626 128 0 0 chr18 2764961 2765055 -83912493 - L1MC1 LINE L1 -13 6320 6227 261 183 0 0 chr18 2766801 2766861 -83910687 + (CA)n Simple_repeat Simple_repeat 2 61 0 230 346 0 26 chr18 2768765 2768843 -83908705 + 7SK RNA RNA 4 79 -114 289 212 30 0 chr18 2768928 2768994 -83908554 - MLT1I LTR MaLR 0 409 342 927 119 0 0 chr18 2769547 2769673 -83907875 - AluJb SINE Alu -186 126 1 2715 212 77 41 chr18 2769760 2770825 -83906723 - L1ME1 LINE L1 -104 6873 5769 1536 239 112 32 chr18 2770912 2771674 -83905874 - L1 LINE L1 -1594 5363 4480 1626 152 30 14 chr18 2771681 2771977 -83905571 + L1 LINE L1 5383 5683 -1274 410 120 33 11 chr18 2771992 2772084 -83905464 + L1MA5 LINE L1 6207 6300 0 3375 251 116 24 chr18 2772093 2772311 -83905237 - L1ME1 LINE L1 -2468 4489 4293 2121 131 0 25 chr18 2772311 2772625 -83904923 - AluSq SINE Alu -7 306 1 3375 251 116 24 chr18 2772625 2774936 -83902612 - L1ME1 LINE L1 -2664 4293 1565 536 278 120 8 chr18 2774958 2775199 -83902349 - L1ME1 LINE L1 -5358 1501 1234 21 36 0 0 chr18 2775268 2775296 -83902252 + AT_rich Low_complexity Low_complexity 1 28 0 1535 224 0 22 chr18 2775326 2775638 -83901910 + AluJb SINE Alu 3 307 -5 237 258 139 48 chr18 2775785 2775994 -83901554 - L1ME1 LINE L1 -5585 1362 1135 325 229 40 0 chr18 2776322 2776603 -83900945 + (TA)n Simple_repeat Simple_repeat 1 292 0 21 57 0 0 chr18 2776624 2776659 -83900889 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr18 2776810 2776831 -83900717 + AT_rich Low_complexity Low_complexity 1 21 0 2475 63 0 0 chr18 2777069 2777371 -83900177 - AluY SINE Alu -7 304 3 1857 134 3 11 chr18 2777732 2778015 -83899533 - AluSx SINE Alu 0 312 32 1261 170 89 68 chr18 2778032 2778414 -83899134 - MLT1B LTR MaLR 0 390 1 185 349 0 12 chr18 2779228 2779314 -83898234 - L2 LINE L2 -2 3270 3186 2184 118 16 0 chr18 2779323 2779672 -83897876 + AluSp SINE Alu 1 354 0 3417 135 73 16 chr18 2779672 2780250 -83897298 + MER4E-int LTR ERV1 3478 4088 -2670 * 4869 132 106 7 chr18 2780249 2781104 -83896444 + MER4E-int LTR ERV1 4452 5391 -1367 5042 136 52 22 chr18 2781147 2782055 -83895493 + MER4E-int LTR ERV1 5711 6645 -113 4620 125 61 4 chr18 2782904 2783641 -83893907 + MER4E LTR ERV1 1 779 0 2758 137 32 78 chr18 2783845 2784400 -83893148 - LTR26B LTR ERV1 0 531 2 288 350 49 0 chr18 2784662 2784785 -83892763 - L2 LINE L2 -1 3312 3184 231 242 0 61 chr18 2784980 2785046 -83892502 - MIR3 SINE MIR -21 187 126 223 185 37 37 chr18 2785197 2785251 -83892297 - MIR SINE MIR -122 140 87 3896 130 32 2 chr18 2785484 2786100 -83891448 + MER41B LTR ERV1 1 635 0 3343 119 11 37 chr18 2786676 2787221 -83890327 - LTR26B LTR ERV1 0 531 1 3135 113 51 6 chr18 2787628 2788117 -83889431 + MER9 LTR ERVK 1 511 0 1634 191 191 9 chr18 2788207 2788599 -83888949 + MLT2B1 LTR ERVL 2 484 -36 2949 152 43 34 chr18 2788599 2789246 -83888302 + MER39B LTR ERV1 1 653 0 1634 191 191 9 chr18 2789246 2789292 -83888256 + MLT2B1 LTR ERVL 484 520 0 225 341 116 7 chr18 2789565 2789703 -83887845 + L2 LINE L2 397 549 -2765 438 293 61 96 chr18 2789709 2789989 -83887559 + L2 LINE L2 3003 3272 0 332 277 83 39 chr18 2790651 2790820 -83886728 + MLT1I LTR MaLR 70 273 -243 414 175 44 70 chr18 2790863 2790977 -83886571 + MLT1I LTR MaLR 281 437 -13 1102 118 118 0 chr18 2791797 2791983 -83885565 - L1PA13 LINE L1 -2 6161 5954 313 258 88 44 chr18 2792193 2792352 -83885196 + MIR SINE MIR 97 262 0 1878 234 24 60 chr18 2792631 2793182 -83884366 + LTR26B LTR ERV1 1 531 0 501 291 77 28 chr18 2793340 2793587 -83883961 - MIR SINE MIR 0 262 4 280 324 55 35 chr18 2793614 2793759 -83883789 - MIR3 SINE MIR -10 198 51 267 31 0 0 chr18 2793866 2793898 -83883650 + (TC)n Simple_repeat Simple_repeat 1 32 0 214 360 16 24 chr18 2796021 2796146 -83881402 - MIR SINE MIR -50 212 89 2155 123 7 3 chr18 2797074 2797375 -83880173 + AluSx SINE Alu 1 302 -10 201 83 0 28 chr18 2797652 2797688 -83879860 + (TTTTA)n Simple_repeat Simple_repeat 2 145 0 1963 138 0 14 chr18 2797688 2797970 -83879578 - AluSx SINE Alu -1 317 5 1581 153 65 4 chr18 2798652 2798927 -83878621 + AluSx SINE Alu 5 296 -16 479 303 124 26 chr18 2799364 2800920 -83876628 - L1ME3 LINE L1 -299 5863 4150 575 251 123 92 chr18 2800960 2801415 -83876133 + MLT1J LTR MaLR 43 511 0 357 272 75 65 chr18 2801426 2802404 -83875144 - L1ME3 LINE L1 -2018 4128 3142 2044 98 3 36 chr18 2802546 2802851 -83874697 - AluY SINE Alu -16 295 1 23 33 0 0 chr18 2802881 2802911 -83874637 + AT_rich Low_complexity Low_complexity 1 30 0 460 171 54 47 chr18 2802971 2803100 -83874448 + MLT1I LTR MaLR 1 130 -279 23 33 0 0 chr18 2804301 2804331 -83873217 + AT_rich Low_complexity Low_complexity 1 30 0 448 262 143 88 chr18 2804416 2804634 -83872914 - MLT1J LTR MaLR -32 479 233 1875 121 0 4 chr18 2804634 2804891 -83872657 - AluSq SINE Alu -13 300 45 448 262 143 88 chr18 2804891 2805023 -83872525 - MLT1J LTR MaLR -278 233 110 228 265 31 41 chr18 2805280 2805378 -83872170 - L1ME4a LINE L1 -90 6031 5935 387 268 144 47 chr18 2805424 2805763 -83871785 - L1ME4a LINE L1 -162 5959 5588 1456 121 5 9 chr18 2805805 2806028 -83871520 - MER4B LTR ERV1 0 610 389 409 166 7 64 chr18 2806031 2806182 -83871366 - MER4A LTR ERV1 -203 461 261 597 121 0 10 chr18 2806182 2806281 -83871267 - MER4A LTR ERV1 -566 98 1 421 285 44 22 chr18 2807531 2807668 -83869880 - MIR SINE MIR -76 186 47 238 284 81 0 chr18 2808310 2808384 -83869164 + MIR SINE MIR 2 81 -181 1349 142 12 130 chr18 2808385 2808715 -83868833 - LTR32 LTR ERVL -1 470 180 799 157 65 0 chr18 2808762 2808915 -83868633 - LTR32 LTR ERVL -296 175 13 523 311 6 23 chr18 2808915 2809092 -83868456 + MIR SINE MIR 79 252 -10 688 298 109 33 chr18 2809366 2809826 -83867722 + HAL1 LINE L1 1409 1903 -604 1826 143 15 29 chr18 2810243 2810585 -83866963 - THE1A LTR MaLR -18 337 1 1869 143 0 27 chr18 2810940 2811259 -83866289 + AluSg SINE Alu 1 311 0 2267 95 0 0 chr18 2812654 2812963 -83864585 + AluSg SINE Alu 1 309 0 1761 126 0 23 chr18 2813131 2813394 -83864154 + AluSc SINE Alu 1 257 -52 829 248 101 21 chr18 2813428 2813666 -83863882 - MIR SINE MIR -2 260 4 604 257 0 0 chr18 2814108 2814244 -83863304 + MIR SINE MIR 113 248 -14 231 347 61 10 chr18 2814421 2814519 -83863029 - MIR SINE MIR -117 145 43 279 0 0 0 chr18 2815207 2815238 -83862310 + (CA)n Simple_repeat Simple_repeat 2 32 0 561 171 0 63 chr18 2815242 2815353 -83862195 - FLAM_A SINE Alu -21 121 18 182 88 0 29 chr18 2816498 2816532 -83861016 + (TA)n Simple_repeat Simple_repeat 2 34 0 796 249 115 5 chr18 2816722 2816931 -83860617 - MIR SINE MIR -29 233 2 349 222 33 0 chr18 2818836 2818926 -83858622 - MER94 DNA DNA -7 127 35 258 81 0 0 chr18 2819131 2819168 -83858380 + (TG)n Simple_repeat Simple_repeat 2 38 0 231 394 48 10 chr18 2820316 2820420 -83857128 + L2 LINE L2 3122 3229 -43 31 0 0 0 chr18 2820796 2820827 -83856721 + AT_rich Low_complexity Low_complexity 1 31 0 679 290 87 19 chr18 2820869 2821667 -83855881 - L1ME LINE L1 -373 5772 4914 263 239 115 35 chr18 2821672 2821785 -83855763 - L1M4 LINE L1 -1021 5125 5004 409 304 105 18 chr18 2821847 2822123 -83855425 - L1ME LINE L1 -5120 999 700 612 320 55 67 chr18 2822632 2823246 -83854302 - L2 LINE L2 -3 3310 2710 2163 121 7 0 chr18 2823246 2823535 -83854013 + AluSx SINE Alu 1 291 -21 612 320 55 67 chr18 2823535 2823692 -83853856 - L2 LINE L2 -603 2710 2553 281 258 15 0 chr18 2824973 2825039 -83852509 - MER5A DNA MER1_type -83 106 40 204 322 17 0 chr18 2825071 2825130 -83852418 + MER5B DNA MER1_type 1 60 -118 3242 164 45 43 chr18 2825135 2825234 -83852314 + LTR8A LTR ERV1 1 98 -629 2157 133 39 33 chr18 2825234 2825596 -83851952 - THE1B LTR MaLR 0 364 1 3242 164 45 43 chr18 2825596 2826221 -83851327 + LTR8A LTR ERV1 98 727 0 480 134 37 0 chr18 2826226 2826308 -83851240 + MER5B DNA MER1_type 67 151 -27 236 267 35 23 chr18 2826233 2826319 -83851229 - MER5A DNA MER1_type -74 115 29 * 343 308 42 21 chr18 2826968 2827134 -83850414 + MIR SINE MIR 46 212 -50 2568 36 0 7 chr18 2827277 2827614 -83849934 - AluY SINE Alu 0 311 2 2216 112 0 7 chr18 2827615 2827910 -83849638 - AluSc SINE Alu -16 293 1 26 0 0 0 chr18 2827962 2827988 -83849560 + AT_rich Low_complexity Low_complexity 1 26 0 396 345 7 0 chr18 2829013 2829161 -83848387 - MIR SINE MIR -8 254 106 374 251 80 68 chr18 2830301 2830464 -83847084 - L2 LINE L2 -213 3059 2895 309 270 10 20 chr18 2831393 2831493 -83846055 - MIR SINE MIR -62 200 102 769 176 81 18 chr18 2831507 2831728 -83845820 - Charlie5 DNA MER1_type 0 2624 2390 315 85 0 0 chr18 2832604 2832651 -83844897 + (CA)n Simple_repeat Simple_repeat 2 48 0 188 257 129 0 chr18 2832669 2832739 -83844809 + L2 LINE L2 3186 3264 -8 234 0 0 0 chr18 2832991 2833017 -83844531 + (TG)n Simple_repeat Simple_repeat 2 27 0 1087 278 64 16 chr18 2833658 2834046 -83843502 + LTR16A LTR ERVL 21 427 -23 419 287 90 80 chr18 2835087 2835387 -83842161 + L3 LINE CR1 1190 1492 -85 357 176 54 0 chr18 2835766 2835840 -83841708 + MLT1H1 LTR MaLR 468 545 -10 1689 180 0 7 chr18 2836865 2837176 -83840372 + AluJo SINE Alu 1 309 0 251 243 108 36 chr18 2888063 2888174 -83789374 + MIR3 SINE MIR 67 185 -23 182 289 19 0 chr18 2888540 2888592 -83788956 - MIR3 SINE MIR -37 171 119 22 70 0 0 chr18 2888950 2888993 -83788555 + AT_rich Low_complexity Low_complexity 1 43 0 352 262 29 10 chr18 2889226 2889329 -83788219 - MIR SINE MIR 0 262 158 395 265 59 71 chr18 2889821 2889991 -83787557 - MIR SINE MIR -92 170 3 2114 56 7 24 chr18 2891547 2891865 -83785683 - AluY SINE Alu 0 313 1 388 358 24 6 chr18 2893068 2893233 -83784315 - MIR SINE MIR -20 242 75 6883 226 37 17 chr18 2893444 2895055 -83782493 + L1M4 LINE L1 2110 3788 -2358 21623 62 6 1 chr18 2895055 2898564 -83778984 + L1PA4 LINE L1 2667 6155 0 6883 226 37 17 chr18 2898564 2898942 -83778606 + L1M4 LINE L1 3788 4157 -1989 2266 100 3 0 chr18 2898998 2899298 -83778250 + AluY SINE Alu 1 301 -10 194 266 38 63 chr18 2899844 2899923 -83777625 - L2 LINE L2 -6 3307 3231 438 256 53 0 chr18 2900067 2900200 -83777348 + MER117 DNA MER1_type 1 140 -57 23 33 0 0 chr18 2901265 2901295 -83776253 + AT_rich Low_complexity Low_complexity 1 30 0 285 358 123 12 chr18 2902208 2902451 -83775097 - L2 LINE L2 -77 3195 2926 350 356 70 30 chr18 2902503 2902773 -83774775 - L2 LINE L2 -470 2844 2564 294 50 0 0 chr18 2902947 2902987 -83774561 + (TG)n Simple_repeat Simple_repeat 2 41 0 4614 84 39 6 chr18 2903239 2903937 -83773611 - LTR30 LTR ERV1 -1 721 1 1198 247 10 0 chr18 2904475 2904787 -83772761 + L1MA4 LINE L1 5985 6299 -1 232 313 27 27 chr18 2905071 2905183 -83772365 - MIR SINE MIR -21 241 130 * 559 252 140 28 chr18 2905133 2905347 -83772201 + MIR SINE MIR 25 262 0 346 314 51 0 chr18 2905342 2905460 -83772088 - MIR SINE MIR -101 161 38 * 1748 127 54 6 chr18 2906252 2906566 -83770982 - L1MB3 LINE L1 -14 6169 5841 1714 177 20 0 chr18 2906566 2906862 -83770686 + L1PA16 LINE L1 5848 6153 -13 25 51 0 0 chr18 2906862 2906901 -83770647 + AT_rich Low_complexity Low_complexity 1 39 0 1225 196 4 4 chr18 2906935 2907170 -83770378 - L1MB3 LINE L1 -328 5855 5621 1866 214 19 19 chr18 2907170 2907633 -83769915 - L1MB3 LINE L1 -1228 4918 4456 243 267 217 81 chr18 2908674 2908767 -83768781 + L2 LINE L2 2807 2886 -386 3110 165 17 4 chr18 2908767 2909306 -83768242 + MER44D DNA MER2_type 2 602 -3 243 267 217 81 chr18 2909306 2909594 -83767954 + L2 LINE L2 2886 3240 -32 1659 69 73 5 chr18 2909596 2909898 -83767650 + MER51B LTR ERV1 3 377 0 190 365 83 16 chr18 2910093 2910285 -83767263 + L2 LINE L2 3012 3216 -56 430 345 85 3 chr18 2910335 2910628 -83766920 + L1M4 LINE L1 2461 2777 -3369 306 233 44 11 chr18 2910823 2910913 -83766635 - MLT1G1 LTR MaLR 0 590 463 567 317 27 39 chr18 2910995 2911238 -83766310 - MLT1G1 LTR MaLR -267 328 87 2966 111 7 2 chr18 2911238 2911670 -83765878 + MER57B LTR ERV1 1 434 0 567 317 27 39 chr18 2911670 2911685 -83765863 - MLT1G1 LTR MaLR -508 87 73 267 237 105 9 chr18 2911882 2911996 -83765552 + L1ME4a LINE L1 5990 6114 -7 21 0 0 0 chr18 2912005 2912026 -83765522 + AT_rich Low_complexity Low_complexity 1 21 0 228 235 20 0 chr18 2914073 2914124 -83763424 + CT-rich Low_complexity Low_complexity 1 52 0 2114 125 0 0 chr18 2915044 2915339 -83762209 - AluSq SINE Alu -18 295 1 1869 161 61 29 chr18 2915458 2915996 -83761552 + MLT2A2 LTR ERVL 1 554 0 22 0 0 0 chr18 2916176 2916198 -83761350 + AT_rich Low_complexity Low_complexity 1 22 0 284 281 89 44 chr18 2916249 2916384 -83761164 - MIR SINE MIR -99 163 23 284 188 29 0 chr18 2917317 2917386 -83760162 - MER5C DNA MER1_type 0 324 254 265 167 0 0 chr18 2917512 2917560 -83759988 - MER5C DNA MER1_type -200 124 77 2090 141 0 0 chr18 2917838 2918137 -83759411 - AluSx SINE Alu -8 304 6 5460 140 10 15 chr18 2918407 2919283 -83758265 + Tigger1 DNA MER2_type 1 872 -1546 4309 159 10 4 chr18 2919291 2919982 -83757566 + MER50 LTR ERV1 17 711 -23 * 9291 139 33 2 chr18 2919980 2921486 -83756062 + Tigger1 DNA MER2_type 866 2418 0 683 179 50 7 chr18 2922794 2922934 -83754614 + MLT1C LTR MaLR 318 463 -4 2090 124 0 7 chr18 2923152 2923443 -83754105 + AluSx SINE Alu 7 295 -17 14205 180 6 8 chr18 2923536 2927424 -83750124 - L1PB1 LINE L1 -5 6146 2265 304 270 208 13 chr18 2927827 2927986 -83749562 + MIR SINE MIR 28 217 -45 1919 94 0 0 chr18 2929453 2929707 -83747841 + AluSg1 SINE Alu 44 297 -12 1770 33 0 0 chr18 2930123 2930337 -83747211 + L1PA2 LINE L1 5942 6155 0 720 227 62 0 chr18 2930443 2930637 -83746911 + L1ME LINE L1 4643 4848 -1298 1644 183 36 57 chr18 2930637 2931025 -83746523 - MLT1B LTR MaLR 0 390 11 1096 184 37 30 chr18 2931030 2931544 -83746004 + L1ME LINE L1 4844 5507 -659 271 245 61 0 chr18 2931738 2931836 -83745712 - L1M4 LINE L1 -1002 5144 5041 361 302 65 0 chr18 2931902 2932041 -83745507 + MLT1K LTR MaLR 290 437 -151 272 295 74 0 chr18 2932182 2932277 -83745271 + MIR SINE MIR 153 254 -8 353 211 0 0 chr18 2934820 2934891 -83742657 - MER116 DNA Mariner -1 79 9 306 0 0 0 chr18 2935367 2935401 -83742147 + (TG)n Simple_repeat Simple_repeat 1 34 0 2440 63 0 0 chr18 2935751 2936053 -83741495 + AluY SINE Alu 3 304 -7 21 0 0 0 chr18 2936291 2936312 -83741236 + AT_rich Low_complexity Low_complexity 1 21 0 215 193 45 0 chr18 2936488 2936576 -83740972 + (TA)n Simple_repeat Simple_repeat 1 92 0 244 273 134 43 chr18 2936927 2937136 -83740412 + L1ME1 LINE L1 1135 1362 -5585 1516 224 0 22 chr18 2937283 2937595 -83739953 - AluJb SINE Alu -5 307 3 21 36 0 0 chr18 2937625 2937653 -83739895 + AT_rich Low_complexity Low_complexity 1 28 0 552 278 120 8 chr18 2937722 2937963 -83739585 + L1ME1 LINE L1 1234 1501 -5358 3501 251 128 24 chr18 2937985 2940296 -83737252 + L1ME1 LINE L1 1565 4295 -2662 2094 131 0 25 chr18 2940296 2940610 -83736938 + AluSq SINE Alu 1 306 -7 3501 251 128 24 chr18 2940610 2940828 -83736720 + L1ME1 LINE L1 4295 4489 -2468 416 120 33 11 chr18 2940837 2940929 -83736619 - L1MA5 LINE L1 0 6300 6207 1641 152 30 14 chr18 2940944 2941240 -83736308 - L1M4 LINE L1 -1274 4872 4572 1564 239 112 32 chr18 2941247 2942009 -83735539 + L1M4 LINE L1 4480 5363 -1594 2765 212 77 41 chr18 2942096 2943161 -83734387 + L1ME1 LINE L1 5769 6873 -104 911 119 0 0 chr18 2943248 2943374 -83734174 + AluJb SINE Alu 1 126 -186 261 183 0 0 chr18 2945929 2945989 -83731559 + (TG)n Simple_repeat Simple_repeat 2 61 0 621 128 0 0 chr18 2947735 2947829 -83729719 + L1MC1 LINE L1 6227 6320 -13 22 0 0 0 chr18 2947829 2947851 -83729697 + AT_rich Low_complexity Low_complexity 1 22 0 335 290 0 20 chr18 2947862 2947962 -83729586 + HAL1 LINE L1 137 234 -2273 * 429 158 137 11 chr18 2947956 2948051 -83729497 + L1MC1 LINE L1 6020 6126 -207 503 330 62 10 chr18 2948482 2948791 -83728757 - L1ME4a LINE L1 -225 5896 5572 266 336 70 16 chr18 2949755 2949883 -83727665 + MIR3 SINE MIR 40 174 -34 1949 147 74 0 chr18 2950184 2950243 -83727305 + L1MC1 LINE L1 60 113 -6220 1949 141 70 0 chr18 2950243 2950570 -83726978 + L1MC1 LINE L1 5984 6333 0 1949 147 74 0 chr18 2950570 2950869 -83726679 + L1MC1 LINE L1 113 6333 0 1523 281 84 16 chr18 2950860 2950947 -83726601 + HAL1 LINE L1 459 539 -1968 * 5037 50 3 0 chr18 2950947 2951568 -83725980 + L1PA6 LINE L1 5526 6148 -6 1523 281 84 16 chr18 2951568 2952210 -83725338 + HAL1 LINE L1 539 1237 -1270 * 6673 151 19 14 chr18 2952209 2954522 -83723026 + L1MA4A LINE L1 3973 6298 -5 254 146 0 0 chr18 2954517 2954572 -83722976 + L1MB4 LINE L1 6126 6180 0 * 493 200 90 75 chr18 2954581 2954781 -83722767 + HAL1 LINE L1 1886 2088 -419 1508 259 144 13 chr18 2954813 2955349 -83722199 - MER115 DNA AcHobo -1 692 87 588 243 38 41 chr18 2955418 2955685 -83721863 + HAL1 LINE L1 2106 2371 -136 2279 96 7 0 chr18 2955762 2956053 -83721495 + AluSx SINE Alu 1 293 -19 256 106 0 0 chr18 2956321 2956368 -83721180 - L1PA8 LINE L1 -1 6171 6125 763 129 95 0 chr18 2956978 2957094 -83720454 + FLAM_C SINE Alu 6 132 -11 350 239 92 18 chr18 2957252 2957415 -83720133 - LTR16B LTR ERVL -12 452 278 2310 95 0 3 chr18 2959053 2959359 -83718189 - AluSq SINE Alu -8 305 1 21 0 0 0 chr18 2959838 2959859 -83717689 + AT_rich Low_complexity Low_complexity 1 21 0 318 268 179 17 chr18 2960270 2960449 -83717099 - MLT1K LTR MaLR -7 581 374 407 127 0 0 chr18 2961094 2961157 -83716391 - Alu SINE Alu -10 300 238 2126 86 50 0 chr18 2961208 2961488 -83716060 - AluSq SINE Alu -19 294 1 287 44 0 0 chr18 2963044 2963086 -83714462 + MLT2B2 LTR ERVL 403 515 0 195 297 20 50 chr18 2963304 2963405 -83714143 + MIR SINE MIR 114 211 -51 248 382 41 41 chr18 2964533 2964656 -83712892 - L2 LINE L2 -50 3222 3100 237 244 87 87 chr18 2966043 2966158 -83711390 - L2 LINE L2 -21 3292 3178 1990 124 14 3 chr18 2968339 2968629 -83708919 - AluSq SINE Alu -20 293 1 405 0 0 0 chr18 2968721 2968766 -83708782 + (TG)n Simple_repeat Simple_repeat 1 45 0 1780 89 0 0 chr18 2968901 2969162 -83708386 + AluY SINE Alu 47 307 0 608 300 0 50 chr18 2971394 2971574 -83705974 - MIR3 SINE MIR -22 186 16 2272 263 113 18 chr18 2971649 2972757 -83704791 - L2 LINE L2 0 3313 2098 468 280 41 82 chr18 2972883 2973176 -83704372 + MARNA DNA Mariner 240 520 -66 695 274 56 26 chr18 2973217 2973451 -83704097 - MIR SINE MIR -4 258 18 2036 93 9 74 chr18 2974206 2974529 -83703019 - AluSq SINE Alu -11 302 1 322 276 71 24 chr18 2975256 2975383 -83702165 - MIR SINE MIR -110 152 20 445 233 80 11 chr18 2976347 2976523 -83701025 - MER20B DNA MER1_type -35 748 561 320 302 26 26 chr18 2976709 2976825 -83700723 - L2 LINE L2 -602 2712 2597 4545 21 0 0 chr18 2977603 2978167 -83699381 - L1P LINE L1 -767 5379 4816 4922 35 2 0 chr18 2978167 2978765 -83698783 + L1PA3 LINE L1 5557 6159 0 796 283 24 60 chr18 2978855 2978936 -83698612 + MIR SINE MIR 21 103 -159 2358 96 0 0 chr18 2978936 2979229 -83698319 + AluSx SINE Alu 3 295 -17 796 283 24 60 chr18 2979229 2979398 -83698150 + MIR SINE MIR 103 262 0 288 0 0 0 chr18 2979417 2979449 -83698099 + (TG)n Simple_repeat Simple_repeat 2 33 0 2382 80 0 3 chr18 2980810 2981111 -83696437 + AluSq SINE Alu 1 300 -13 1832 187 0 9 chr18 2981394 2981709 -83695839 - AluJo SINE Alu 0 312 1 239 355 121 49 chr18 2981740 2982005 -83695543 - L2 LINE L2 -481 2833 2550 320 364 38 15 chr18 2982103 2982235 -83695313 + L2 LINE L2 3133 3267 -5 285 217 43 14 chr18 2982604 2982673 -83694875 + Tigger7 DNA MER2_type 1 71 -268 30 27 0 0 chr18 2982678 2982715 -83694833 + AT_rich Low_complexity Low_complexity 1 37 0 412 110 65 7 chr18 2982715 2982869 -83694679 + (TA)n Simple_repeat Simple_repeat 2 164 0 1289 145 60 0 chr18 2982889 2983123 -83694425 + Tigger7 DNA MER2_type 2239 2486 -1 665 293 90 33 chr18 2983370 2983858 -83693690 - LTR33 LTR ERVL -2 519 4 252 86 0 0 chr18 2984215 2984250 -83693298 + (CA)n Simple_repeat Simple_repeat 2 36 0 204 245 0 0 chr18 2984520 2984573 -83692975 + MIR SINE MIR 209 261 -1 676 223 189 4 chr18 2986038 2986271 -83691277 + L2 LINE L2 1911 2186 -1128 1792 192 77 8 chr18 2986284 2986648 -83690900 + MSTD LTR MaLR 8 396 0 2633 264 79 23 chr18 2986654 2987702 -83689846 + L2 LINE L2 2188 3306 -7 547 323 50 5 chr18 2987845 2988046 -83689502 - MIR SINE MIR -43 219 10 2225 110 7 0 chr18 2989969 2990269 -83687279 + AluSp SINE Alu 1 302 -11 321 390 22 33 chr18 2990344 2990526 -83687022 + MIR3 SINE MIR 23 202 -6 5620 116 61 2 chr18 2990624 2991546 -83686002 - Tigger1 DNA MER2_type -4 2414 1439 4307 133 65 7 chr18 2991544 2992296 -83685252 - Tigger1 DNA MER2_type -1407 1011 216 * 1279 97 0 0 chr18 2992297 2992462 -83685086 + AluSp SINE Alu 148 312 -1 596 125 67 33 chr18 2992469 2992589 -83684959 - Tigger1 DNA MER2_type -2293 125 2 297 211 60 21 chr18 2992806 2992928 -83684620 - MER21B LTR ERV1 -123 808 607 * 878 290 73 61 chr18 2992900 2993392 -83684156 - MER21B LTR ERV1 -249 682 98 718 269 91 16 chr18 2993695 2993937 -83683611 + MIR SINE MIR 3 262 0 1119 157 10 0 chr18 2993998 2994195 -83683353 - L1PB4 LINE L1 -1 6155 5957 200 292 15 0 chr18 2994283 2994348 -83683200 + MIR3 SINE MIR 138 203 -5 332 377 35 52 chr18 2995270 2995639 -83681909 + L3 LINE CR1 407 769 -808 2556 212 93 19 chr18 2995652 2996370 -83681178 - LTR48 LTR ERV1 -16 771 1 408 327 31 13 chr18 2996392 2996618 -83680930 + L3 LINE CR1 792 1021 -556 470 331 49 0 chr18 2997167 2997234 -83680314 + MER34B LTR ERV1 10 68 -474 4486 162 59 16 chr18 2997234 2997370 -83680178 - MER4D LTR ERV1 0 903 774 2310 99 0 7 chr18 2997370 2997674 -83679874 - AluSg SINE Alu -8 302 1 4486 162 59 16 chr18 2997674 2998403 -83679145 - MER4D LTR ERV1 -129 774 1 470 331 49 0 chr18 2998403 2998491 -83679057 + MER34B LTR ERV1 68 164 -378 338 212 11 2 chr18 2998512 2998600 -83678948 - MER39B LTR ERV1 0 626 531 186 43 0 0 chr18 2998600 2998623 -83678925 + (TTG)n Simple_repeat Simple_repeat 2 24 0 380 122 14 14 chr18 2998654 2998728 -83678820 - L1PA10 LINE L1 -3 6165 6092 847 96 0 0 chr18 2998728 2998853 -83678695 - L1PA10 LINE L1 -333 5841 5717 1751 169 7 14 chr18 2998861 2999156 -83678392 - AluJo SINE Alu -19 293 1 1141 108 22 0 chr18 2999157 2999342 -83678206 - MER39B LTR ERV1 -87 566 378 651 81 121 0 chr18 2999343 2999442 -83678106 - MER39B LTR ERV1 -542 111 1 544 241 22 97 chr18 2999442 2999847 -83677701 + MER34B LTR ERV1 169 542 0 249 310 235 26 chr18 3000111 3000379 -83677169 + L3 LINE CR1 1180 1503 -74 1825 98 9 112 chr18 3000742 3001080 -83676468 + AluSx SINE Alu 1 303 -9 522 254 57 80 chr18 3001112 3001410 -83676138 + HAL1b LINE L1 631 915 -433 2249 116 0 0 chr18 3001410 3001712 -83675836 + AluSx SINE Alu 1 302 -10 522 254 57 80 chr18 3001712 3001902 -83675646 + HAL1b LINE L1 915 1108 -240 200 159 0 23 chr18 3002569 3002613 -83674935 + GA-rich Low_complexity Low_complexity 2 44 0 3830 164 31 15 chr18 3002653 3003437 -83674111 + L1MB3 LINE L1 5387 6182 -1 261 208 13 20 chr18 3004128 3004277 -83673271 + (TA)n Simple_repeat Simple_repeat 1 148 0 1693 189 0 40 chr18 3004283 3004584 -83672964 - AluJo SINE Alu -22 290 2 289 136 0 0 chr18 3006314 3006358 -83671190 - MSTA LTR MaLR 0 428 385 634 233 17 6 chr18 3006359 3006536 -83671012 - MLT1E LTR MaLR -387 180 1 246 312 147 0 chr18 3006593 3006702 -83670846 - L2 LINE L2 0 3313 3189 2644 108 3 6 chr18 3007095 3007457 -83670091 + THE1B LTR MaLR 1 361 -3 1972 131 81 31 chr18 3007633 3008014 -83669534 - MSTA LTR MaLR -28 400 1 415 165 0 24 chr18 3008100 3008185 -83669363 + LTR54B LTR ERV1 1 83 -415 257 179 18 0 chr18 3008254 3008310 -83669238 - LTR54 LTR ERV1 -379 131 75 * 381 196 24 173 chr18 3008301 3008469 -83669079 + LTR54 LTR ERV1 139 281 -229 6521 134 7 11 chr18 3008498 3010065 -83667483 - L1MA3 LINE L1 -7 7717 6153 * 11857 172 19 21 chr18 3010061 3010847 -83666701 - L1MA3 LINE L1 -5404 2161 1375 2175 74 17 30 chr18 3010847 3011146 -83666402 + AluSp SINE Alu 16 310 -3 11857 172 19 21 chr18 3011146 3012513 -83665035 - L1MA3 LINE L1 -6190 1375 13 829 172 46 0 chr18 3012517 3012691 -83664857 + LTR54 LTR ERV1 329 510 0 199 292 0 0 chr18 3012699 3012747 -83664801 + L2 LINE L2 3219 3266 -6 2159 165 26 53 chr18 3014316 3014807 -83662741 + MER34B LTR ERV1 11 488 -77 431 306 95 26 chr18 3014892 3015124 -83662424 - MIR SINE MIR -1 261 14 355 87 29 0 chr18 3015483 3015552 -83661996 + (TTTG)n Simple_repeat Simple_repeat 2 72 0 939 246 23 19 chr18 3015562 3015826 -83661722 - MLT1L LTR MaLR -343 272 8 288 0 0 0 chr18 3015877 3015909 -83661639 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 1795 159 3 20 chr18 3016266 3016561 -83660987 + AluJo SINE Alu 4 293 -19 1906 153 5 79 chr18 3018435 3018854 -83658694 + MLT1B LTR MaLR 3 390 0 210 284 0 30 chr18 3018966 3019033 -83658515 + MIR SINE MIR 186 250 -12 991 216 38 0 chr18 3019302 3019538 -83658010 + L1 LINE L1 4924 5168 -978 229 230 155 20 chr18 3019882 3020082 -83657466 - L1MC5 LINE L1 -101 7860 7634 463 220 139 19 chr18 3020142 3020351 -83657197 - L1MC5 LINE L1 -425 7536 7303 363 291 57 13 chr18 3020462 3020620 -83656928 - LTR16C LTR ERVL 0 491 327 264 132 0 19 chr18 3020969 3021022 -83656526 + MLT2B1 LTR ERVL 461 512 -8 597 311 43 0 chr18 3021188 3021442 -83656106 - L1MC4a LINE L1 -1946 5862 5598 11425 153 30 10 chr18 3021442 3023458 -83654090 + ERVL LTR ERVL 2517 4572 -1192 4614 165 57 36 chr18 3023577 3024571 -83652977 + L1MC2 LINE L1 5213 6216 -128 2293 107 0 3 chr18 3024571 3024870 -83652678 - AluSx SINE Alu -14 298 1 4614 165 57 36 chr18 3024870 3024975 -83652573 + L1MC2 LINE L1 6216 6317 -27 3166 143 11 30 chr18 3025650 3026174 -83651374 - MLT2B2 LTR ERVL 0 515 2 1227 35 0 7 chr18 3026464 3026609 -83650939 + AluY SINE Alu 3 146 -165 212 0 0 35 chr18 3026636 3026665 -83650883 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 332 83 0 0 chr18 3026883 3026931 -83650617 - MADE1 DNA Mariner 0 80 33 354 109 62 0 chr18 3026941 3027005 -83650543 - MADE1 DNA Mariner -12 68 1 309 26 0 0 chr18 3028011 3028049 -83649499 + (TATTG)n Simple_repeat Simple_repeat 2 39 0 537 194 0 0 chr18 3028071 3028169 -83649379 - AluJ/FLAM SINE Alu -212 100 3 370 207 30 30 chr18 3028370 3028505 -83649043 - L1ME4a LINE L1 -21 6100 5966 2409 140 10 0 chr18 3028828 3029220 -83648328 + MER57A LTR ERV1 8 403 0 237 253 0 48 chr18 3030286 3030369 -83647179 + GA-rich Low_complexity Low_complexity 3 81 0 258 266 0 0 chr18 3030528 3030607 -83646941 + LTR67 LTR ERVL 3 81 -476 2275 108 0 0 chr18 3031273 3031569 -83645979 + AluY SINE Alu 1 296 -15 22 35 0 0 chr18 3032150 3032179 -83645369 + AT_rich Low_complexity Low_complexity 1 29 0 220 301 21 54 chr18 3032329 3032422 -83645126 - MIR3 SINE MIR -6 202 113 2119 117 7 17 chr18 3032432 3032730 -83644818 + AluSx SINE Alu 5 299 -13 2325 249 68 57 chr18 3032812 3033985 -83643563 - L1MCa LINE L1 -3691 2735 1576 2260 146 95 0 chr18 3033985 3034376 -83643172 - MSTC LTR MaLR 0 428 1 2325 249 68 57 chr18 3034376 3034552 -83642996 - L1MCa LINE L1 -4850 1576 1403 1424 200 7 32 chr18 3034552 3034837 -83642711 - AluJo SINE Alu -30 282 5 2325 249 68 57 chr18 3034837 3035288 -83642260 - L1MCa LINE L1 -5023 1403 849 343 145 72 12 chr18 3035293 3035376 -83642172 + L1M4 LINE L1 4629 4716 -1430 640 137 0 39 chr18 3035376 3035529 -83642019 + (GGA)n Simple_repeat Simple_repeat 3 149 0 1552 117 0 5 chr18 3035667 3035872 -83641676 - AluSg SINE Alu -106 204 1 324 350 20 48 chr18 3035875 3036169 -83641379 - L1ME LINE L1 -508 5613 5328 2269 103 0 3 chr18 3036543 3036845 -83640703 - AluSg SINE Alu -9 301 1 223 303 106 16 chr18 3036950 3037073 -83640475 + MIR SINE MIR 36 167 -65 4377 69 9 2 chr18 3037950 3038532 -83639016 + L1PA14 LINE L1 5565 6150 -11 674 355 99 8 chr18 3038805 3039178 -83638370 - L2 LINE L2 -318 2995 2588 28 0 0 0 chr18 3039728 3039756 -83637792 + AT_rich Low_complexity Low_complexity 1 28 0 287 270 135 18 chr18 3039809 3039920 -83637628 - MIR3 SINE MIR 0 208 85 758 309 53 25 chr18 3039982 3040267 -83637281 + L2 LINE L2 946 1238 -2076 631 236 35 16 chr18 3040321 3040512 -83637036 - MLT1H1 LTR MaLR -312 237 1 2499 71 0 6 chr18 3040898 3041209 -83636339 + AluY SINE Alu 1 309 -2 1441 50 6 0 chr18 3041598 3041812 -83635736 + L1PA3 LINE L1 5974 6188 0 299 214 0 0 chr18 3042319 3042375 -83635173 - MLT1K LTR MaLR -349 239 184 1478 188 68 31 chr18 3042454 3042806 -83634742 + MLT1A1 LTR MaLR 1 365 0 336 298 98 68 chr18 3045372 3045589 -83631959 + L1MEd LINE L1 13 245 -5874 2181 119 3 7 chr18 3045589 3045892 -83631656 - AluSq SINE Alu -11 302 1 336 298 98 68 chr18 3045892 3046010 -83631538 + L1MEd LINE L1 245 358 -5761 234 219 88 44 chr18 3046101 3046215 -83631333 - MLT1H1 LTR MaLR -115 440 322 333 284 20 40 chr18 3046286 3046434 -83631114 + LTR16B LTR ERVL 320 464 0 25 0 0 0 chr18 3047546 3047571 -83629977 + AT_rich Low_complexity Low_complexity 1 25 0 1716 134 15 86 chr18 3047791 3048153 -83629395 - AluJo SINE Alu 0 312 1 2068 105 0 0 chr18 3048576 3048842 -83628706 + AluSx SINE Alu 30 295 -17 2057 114 42 7 chr18 3049274 3049563 -83627985 - AluSx SINE Alu -13 299 1 1288 128 80 0 chr18 3049563 3049750 -83627798 - AluSg/x SINE Alu -10 302 101 1232 99 6 12 chr18 3050437 3050608 -83626940 - AluSp SINE Alu -5 308 139 450 194 87 0 chr18 3051197 3051300 -83626248 + MER94 DNA DNA 1 112 -22 2155 104 3 17 chr18 3051720 3052017 -83625531 - AluSq SINE Alu -20 293 1 720 144 9 0 chr18 3052046 3052157 -83625391 + FLAM_C SINE Alu 21 132 -11 180 303 41 82 chr18 3052426 3052548 -83625000 + MIR SINE MIR 18 134 -74 1306 206 0 4 chr18 3052548 3052801 -83624747 - AluJo SINE Alu -7 305 54 1774 142 15 4 chr18 3052803 3053070 -83624478 - AluSx SINE Alu -42 270 1 1927 125 3 14 chr18 3053073 3053360 -83624188 - AluSx SINE Alu -4 308 25 316 203 58 0 chr18 3053366 3053435 -83624113 + MIR SINE MIR 121 193 -69 528 231 126 7 chr18 3053540 3053683 -83623865 - MER45A DNA AcHobo -6 172 13 506 203 0 25 chr18 3054092 3054255 -83623293 + GA-rich Low_complexity Low_complexity 1 159 0 1917 120 3 55 chr18 3054591 3054899 -83622649 + AluSg SINE Alu 1 292 -18 26 0 0 0 chr18 3054899 3054925 -83622623 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr18 3055380 3055408 -83622140 + AT_rich Low_complexity Low_complexity 1 28 0 372 309 90 90 chr18 3055735 3055991 -83621557 - L2 LINE L2 0 3272 3017 2136 118 3 0 chr18 3056551 3056847 -83620701 - AluSc SINE Alu -12 297 1 1262 163 5 0 chr18 3056943 3057139 -83620409 + AluJb SINE Alu 85 281 -31 1485 241 50 56 chr18 3058181 3058318 -83619230 + L1MC4a LINE L1 5291 5427 -2381 2303 85 10 0 chr18 3058318 3058613 -83618935 + AluSq SINE Alu 1 298 -15 1485 241 50 56 chr18 3058613 3058992 -83618556 + L1MC4a LINE L1 5427 5805 -2003 1846 112 66 11 chr18 3058992 3059278 -83618270 + AluSq SINE Alu 1 302 -11 1485 241 50 56 chr18 3059278 3059404 -83618144 + L1MC4a LINE L1 5805 5930 -1878 23 33 0 0 chr18 3059583 3059613 -83617935 + AT_rich Low_complexity Low_complexity 1 30 0 874 126 7 42 chr18 3060938 3061081 -83616467 - AluSq/x SINE Alu -175 138 1 1685 164 7 14 chr18 3063509 3063796 -83613752 - AluJo SINE Alu -27 285 1 1714 144 29 4 chr18 3064014 3064315 -83613233 + AluSx SINE Alu 1 308 0 476 241 69 75 chr18 3064912 3065040 -83612508 - MER5B DNA MER1_type 0 178 50 734 191 15 0 chr18 3065040 3065171 -83612377 + FLAM_A SINE Alu 1 133 0 476 241 69 75 chr18 3065171 3065216 -83612332 - MER5B DNA MER1_type -128 50 6 268 290 19 56 chr18 3065487 3065649 -83611899 - MLT1K LTR MaLR -11 577 422 2271 125 0 0 chr18 3065961 3066273 -83611275 + AluSx SINE Alu 1 312 0 701 321 91 27 chr18 3066446 3066895 -83610653 - L2 LINE L2 -531 2783 2306 264 324 116 42 chr18 3067046 3067287 -83610261 - L2 LINE L2 -2717 597 339 363 250 102 8 chr18 3067940 3068068 -83609480 + LTR67 LTR ERVL 418 557 0 27 0 0 0 chr18 3068268 3068295 -83609253 + AT_rich Low_complexity Low_complexity 1 27 0 2248 107 7 0 chr18 3068349 3068657 -83608891 - AluSx SINE Alu -2 310 1 252 336 109 0 chr18 3070133 3070243 -83607305 + L2 LINE L2 3151 3272 0 2466 71 0 0 chr18 3070414 3070708 -83606840 + AluSg SINE Alu 1 294 -16 1398 138 4 43 chr18 3070960 3071191 -83606357 + AluJb SINE Alu 75 296 -16 2370 70 0 0 chr18 3071588 3071873 -83605675 - AluSc SINE Alu -24 285 1 336 235 134 61 chr18 3072020 3072183 -83605365 + MIR SINE MIR 34 204 -58 193 375 0 0 chr18 3072318 3072390 -83605158 - L2 LINE L2 -8 3305 3234 182 229 0 16 chr18 3072988 3073049 -83604499 + GA-rich Low_complexity Low_complexity 5 64 0 344 211 49 73 chr18 3073355 3073478 -83604070 + MLT1I LTR MaLR 273 392 -17 760 275 128 16 chr18 3073574 3073999 -83603549 + L2 LINE L2 2741 3240 -73 275 201 97 3 chr18 3074010 3074113 -83603435 + L1MDa LINE L1 1813 1965 -4620 * 1346 216 78 57 chr18 3074105 3074523 -83603025 + L1MDa LINE L1 2176 2584 -3956 1877 127 0 109 chr18 3074523 3074863 -83602685 + AluSx SINE Alu 1 303 -9 1346 216 78 57 chr18 3074863 3075155 -83602393 + L1MDa LINE L1 2584 2868 -3672 665 180 33 0 chr18 3075155 3075277 -83602271 + FLAM_A SINE Alu 1 126 -7 1346 216 78 57 chr18 3075277 3075380 -83602168 + L1MDa LINE L1 2868 2967 -3573 1894 136 0 36 chr18 3075380 3075688 -83601860 + AluSx SINE Alu 2 298 -14 1346 216 78 57 chr18 3075688 3075869 -83601679 + L1MDa LINE L1 2967 3169 -3371 276 307 165 0 chr18 3075898 3076025 -83601523 + MIR SINE MIR 84 231 -31 2190 76 13 29 chr18 3076141 3076455 -83601093 + L1PA10 LINE L1 5857 6165 -3 2364 98 3 0 chr18 3076894 3077199 -83600349 + AluSp SINE Alu 1 306 -7 1493 228 58 3 chr18 3077559 3077905 -83599643 + MLT1A1 LTR MaLR 1 365 0 371 158 0 0 chr18 3078084 3078141 -83599407 + MIR SINE MIR 44 100 -162 22 0 0 0 chr18 3078143 3078165 -83599383 + AT_rich Low_complexity Low_complexity 1 22 0 189 275 220 0 chr18 3078202 3078293 -83599255 + MIR SINE MIR 94 204 -58 2137 120 0 7 chr18 3078590 3078890 -83598658 + AluSx SINE Alu 1 298 -14 195 371 58 47 chr18 3078900 3079050 -83598498 + MIR SINE MIR 33 183 -66 374 247 24 0 chr18 3079372 3079457 -83598091 - L2 LINE L2 0 3313 3227 700 224 7 0 chr18 3079474 3079621 -83597927 - L1PA16 LINE L1 -25 6141 5994 934 305 64 13 chr18 3079973 3080347 -83597201 + L2 LINE L2 1734 2126 -1188 1338 224 200 4 chr18 3080566 3080877 -83596671 + L1ME1 LINE L1 4553 4802 -1344 2269 115 0 0 chr18 3080877 3081182 -83596366 + AluSp SINE Alu 1 305 -8 1338 224 200 4 chr18 3081182 3081400 -83596148 + L1ME1 LINE L1 4802 5186 -960 2107 95 7 3 chr18 3081411 3081705 -83595843 + AluY SINE Alu 11 305 -6 700 213 38 33 chr18 3081720 3081903 -83595645 + L1MD2 LINE L1 6159 6342 -17 1102 216 58 8 chr18 3081915 3082306 -83595242 + L1ME1 LINE L1 5174 5581 -585 624 126 0 0 chr18 3082307 3082394 -83595154 - AluSg/x SINE Alu -16 294 208 28 0 0 0 chr18 3082446 3082474 -83595074 + AT_rich Low_complexity Low_complexity 1 28 0 2080 127 10 17 chr18 3082474 3082774 -83594774 + AluSx SINE Alu 1 298 -14 602 236 32 2 chr18 3082778 3082950 -83594598 + L1ME1 LINE L1 5596 5772 -398 1708 191 158 26 chr18 3082970 3083425 -83594123 + MLT1E2 LTR MaLR 64 571 -55 1955 166 0 3 chr18 3083425 3083732 -83593816 - AluJb SINE Alu -6 306 1 1708 191 158 26 chr18 3083732 3083797 -83593751 + MLT1E2 LTR MaLR 571 626 0 285 248 76 9 chr18 3083798 3083903 -83593645 + MLT1E2-int LTR MaLR 2 113 -1258 1353 249 33 0 chr18 3083917 3084254 -83593294 + MLT1E2-int LTR MaLR 259 606 -765 241 245 19 0 chr18 3084502 3084555 -83592993 + GA-rich Low_complexity Low_complexity 6 59 0 288 333 58 29 chr18 3084821 3084992 -83592556 - MIR SINE MIR -6 256 81 776 237 129 9 chr18 3087278 3087502 -83590046 - MIR SINE MIR -11 251 1 423 288 187 15 chr18 3087919 3088117 -83589431 + MIR SINE MIR 23 254 -8 1130 232 48 3 chr18 3088885 3089178 -83588370 + L1ME1 LINE L1 5853 6158 -8 752 295 36 13 chr18 3089500 3089802 -83587746 - MER102b DNA MER1_type 0 341 33 25 0 0 28 chr18 3090575 3090588 -83586960 + AT_rich Low_complexity Low_complexity 1 13 -22 2204 104 3 7 chr18 3090588 3090887 -83586661 - AluSx SINE Alu -14 298 1 25 0 0 28 chr18 3090887 3090909 -83586639 + AT_rich Low_complexity Low_complexity 13 35 0 23 33 0 0 chr18 3090986 3091016 -83586532 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr18 3092328 3092355 -83585193 + AT_rich Low_complexity Low_complexity 1 27 0 1705 20 0 0 chr18 3093311 3093510 -83584038 - L1PA3 LINE L1 0 6155 5957 21 36 0 0 chr18 3093548 3093576 -83583972 + AT_rich Low_complexity Low_complexity 1 28 0 2110 102 48 7 chr18 3093951 3094246 -83583302 + AluSx SINE Alu 1 307 -5 299 282 248 29 chr18 3094554 3094760 -83582788 - MIR SINE MIR -10 252 2 1346 193 16 16 chr18 3095955 3096276 -83581272 - MER33 DNA MER1_type -1 323 3 23 54 0 0 chr18 3096287 3096324 -83581224 + AT_rich Low_complexity Low_complexity 1 37 0 1748 125 70 3 chr18 3097295 3097608 -83579940 + MER44D DNA MER2_type 6 609 0 314 329 117 57 chr18 3099329 3099947 -83577601 + L2 LINE L2 362 1016 -2298 201 183 28 14 chr18 3100467 3100538 -83577010 + GA-rich Low_complexity Low_complexity 4 75 0 1947 139 0 41 chr18 3100805 3101132 -83576416 + AluSq SINE Alu 1 315 0 779 200 78 1 chr18 3101450 3101644 -83575904 + L1P4 LINE L1 5476 5693 -470 354 289 39 8 chr18 3101717 3101845 -83575703 - MER77 LTR ERV1 -6 599 468 592 165 123 98 chr18 3101849 3101988 -83575560 + L1MC4 LINE L1 7613 7762 -280 2794 13 0 0 chr18 3101988 3102294 -83575254 + AluY SINE Alu 1 306 -5 592 165 123 98 chr18 3102294 3102390 -83575158 + L1MC4 LINE L1 7762 7854 -188 1742 168 33 10 chr18 3102526 3102830 -83574718 + AluJo SINE Alu 1 311 -1 2223 86 4 0 chr18 3103018 3103297 -83574251 + AluSg SINE Alu 1 280 -30 565 95 0 0 chr18 3103297 3103324 -83574224 + AluY SINE Alu 1 306 0 23 33 0 0 chr18 3104206 3104236 -83573312 + AT_rich Low_complexity Low_complexity 1 30 0 2030 192 152 11 chr18 3104246 3104813 -83572735 - L1MC4a LINE L1 -155 7653 7007 366 327 26 13 chr18 3105166 3105319 -83572229 - MIR SINE MIR -80 182 28 22 0 0 0 chr18 3105584 3105606 -83571942 + AT_rich Low_complexity Low_complexity 1 22 0 2145 236 82 43 chr18 3106799 3106909 -83570639 + L1MEc LINE L1 189 293 -6270 273 29 0 0 chr18 3106909 3106943 -83570605 + (TTGG)n Simple_repeat Simple_repeat 3 36 0 2145 236 82 43 chr18 3106943 3107699 -83569849 + L1MEc LINE L1 293 1089 -5474 294 132 19 0 chr18 3107868 3107921 -83569627 + L1MEc LINE L1 1297 1350 -5034 244 93 19 37 chr18 3107921 3107975 -83569573 + (GGA)n Simple_repeat Simple_repeat 2 54 0 1264 251 78 34 chr18 3108099 3108518 -83569030 + L1MEc LINE L1 144 590 -5806 1602 209 99 55 chr18 3108518 3109012 -83568536 + LTR40a LTR ERVL 4 519 0 1264 251 78 34 chr18 3109012 3109095 -83568453 + L1MEc LINE L1 590 668 -5728 1496 192 36 91 chr18 3109212 3109815 -83567733 + L1MEc LINE L1 2713 3282 -2933 * 4402 151 76 3 chr18 3109813 3110696 -83566852 + L1MB4 LINE L1 5223 6169 -11 413 266 27 59 chr18 3110700 3110834 -83566714 + L1MEc LINE L1 3332 3456 -2759 1905 161 7 10 chr18 3110834 3111144 -83566404 - AluSx SINE Alu -3 309 1 413 266 27 59 chr18 3111144 3111265 -83566283 + L1MEc LINE L1 3456 3579 -2636 318 340 0 0 chr18 3111265 3111368 -83566180 + L1MEc LINE L1 3009 3111 -3104 424 254 138 133 chr18 3111379 3111701 -83565847 + L1MEc LINE L1 3545 3864 -2351 2331 72 3 7 chr18 3111701 3111994 -83565554 + AluY SINE Alu 1 292 -19 424 254 138 133 chr18 3111994 3112458 -83565090 + L1MEc LINE L1 3864 4335 -1880 288 287 72 22 chr18 3112459 3112682 -83564866 + L1MEc LINE L1 4492 4725 -1490 295 151 0 0 chr18 3113129 3113182 -83564366 + L1P5 LINE L1 5428 5480 -676 1954 150 3 7 chr18 3113195 3113489 -83564059 + AluJo SINE Alu 1 293 -19 3025 142 46 5 chr18 3113491 3114054 -83563494 + L1MB4 LINE L1 5595 6180 0 1944 132 3 35 chr18 3114414 3114733 -83562815 + AluSx SINE Alu 1 309 -3 22 0 0 0 chr18 3115055 3115077 -83562471 + AT_rich Low_complexity Low_complexity 1 22 0 1635 57 0 38 chr18 3115227 3115436 -83562112 + AluY SINE Alu 1 201 -110 220 343 50 0 chr18 3115704 3115803 -83561745 + L2 LINE L2 3169 3272 0 200 219 0 0 chr18 3116059 3116100 -83561448 + L2 LINE L2 3264 3304 -9 2019 120 35 3 chr18 3116111 3116395 -83561153 + AluSx SINE Alu 1 293 -19 1374 101 0 44 chr18 3116403 3116631 -83560917 + L1PA13 LINE L1 5946 6163 0 353 244 163 32 chr18 3116740 3116863 -83560685 + L2 LINE L2 3134 3272 0 1883 82 97 4 chr18 3116895 3117226 -83560322 + AluY SINE Alu 1 355 0 271 210 32 0 chr18 3119267 3119329 -83558219 + MER21A LTR ERV1 2 65 -866 372 175 0 0 chr18 3119339 3119402 -83558146 + MER21B LTR ERV1 232 294 -569 2184 114 0 0 chr18 3119575 3119874 -83557674 + AluSq SINE Alu 1 299 -14 25 31 0 0 chr18 3121702 3121734 -83555814 + AT_rich Low_complexity Low_complexity 1 32 0 332 295 22 43 chr18 3121814 3121953 -83555595 - MIR3 SINE MIR -72 136 1 274 284 39 69 chr18 3123778 3123880 -83553668 + L2 LINE L2 3166 3264 -8 253 172 207 35 chr18 3124702 3124789 -83552759 + MER34C LTR ERV1 271 372 -213 2376 109 53 0 chr18 3124798 3125192 -83552356 + L1MA5A LINE L1 5873 6287 -10 472 209 52 8 chr18 3125355 3125489 -83552059 + MER4B-int LTR ERV1 4161 4300 -2458 22 0 0 0 chr18 3125634 3125656 -83551892 + AT_rich Low_complexity Low_complexity 1 22 0 597 146 126 0 chr18 3126041 3126144 -83551404 + FLAM_C SINE Alu 1 116 -17 1534 139 0 133 chr18 3126176 3126335 -83551213 + AluJo SINE Alu 1 93 -209 1882 159 7 0 chr18 3126335 3126624 -83550924 + AluJb SINE Alu 1 291 -21 1534 139 0 133 chr18 3126624 3126802 -83550746 + AluJo SINE Alu 93 293 -9 1964 129 49 22 chr18 3126845 3127255 -83550293 - Charlie1b DNA MER1_type -34 489 69 645 256 46 0 chr18 3127302 3127497 -83550051 + L1ME1 LINE L1 5959 6162 -4 425 241 18 36 chr18 3127791 3127903 -83549645 - MIR SINE MIR -8 254 145 2324 81 3 7 chr18 3127908 3128205 -83549343 - AluSg SINE Alu -14 296 1 2291 107 3 0 chr18 3130110 3130418 -83547130 - AluSx SINE Alu -3 309 1 322 271 59 35 chr18 3130418 3130619 -83546929 - L1ME LINE L1 -465 5656 5442 206 163 41 0 chr18 3130625 3130674 -83546874 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 2512 71 3 3 chr18 3131421 3131730 -83545818 - AluSg1 SINE Alu 0 309 1 535 283 118 29 chr18 3131876 3132155 -83545393 - LTR67 LTR ERVL 0 557 254 260 244 39 0 chr18 3132272 3132350 -83545198 - LTR67 LTR ERVL -476 81 1 1196 268 109 49 chr18 3132364 3133113 -83544435 + L2 LINE L2 2442 3230 -83 275 297 36 20 chr18 3134044 3134239 -83543309 + L1M4 LINE L1 4733 4930 -1216 198 0 0 0 chr18 3134379 3134401 -83543147 + (T)n Simple_repeat Simple_repeat 1 22 0 563 261 106 10 chr18 3134992 3135303 -83542245 - HAL1 LINE L1 -181 2326 1986 973 233 56 0 chr18 3135338 3135587 -83541961 - HAL1 LINE L1 -690 1817 1555 247 254 48 0 chr18 3135638 3135701 -83541847 + CT-rich Low_complexity Low_complexity 1 66 0 471 259 23 76 chr18 3136216 3136479 -83541069 - HAL1 LINE L1 -1131 1376 1128 570 146 0 0 chr18 3136490 3136586 -83540962 + (TCC)n Simple_repeat Simple_repeat 2 97 0 715 179 0 8 chr18 3136613 3136730 -83540818 - FLAM_C SINE Alu -16 117 2 284 122 0 0 chr18 3136732 3136781 -83540767 - AluJo/FLAM SINE Alu -170 132 84 273 210 30 30 chr18 3136782 3136882 -83540666 - HAL1 LINE L1 -1384 1123 1024 1428 147 36 46 chr18 3136882 3137009 -83540539 - MLT1C LTR MaLR -163 304 177 2268 73 3 32 chr18 3137009 3137322 -83540226 - AluY SINE Alu -5 306 3 1428 147 36 46 chr18 3137322 3137501 -83540047 - MLT1C LTR MaLR -290 177 1 384 289 74 7 chr18 3138048 3138197 -83539351 + L2 LINE L2 3106 3264 -49 956 112 0 15 chr18 3139213 3139347 -83538201 + AluSq/x SINE Alu 2 133 -180 2212 118 0 0 chr18 3139359 3139655 -83537893 + AluSx SINE Alu 3 298 -14 2600 65 0 0 chr18 3139862 3140171 -83537377 + AluY SINE Alu 1 309 -2 338 214 48 0 chr18 3140312 3140396 -83537152 + MIR SINE MIR 119 206 -56 189 0 0 0 chr18 3141169 3141190 -83536358 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr18 3141439 3141460 -83536088 + AT_rich Low_complexity Low_complexity 1 21 0 2252 118 0 0 chr18 3141586 3141899 -83535649 + AluSq SINE Alu 1 313 0 276 323 47 16 chr18 3141908 3142162 -83535386 + L1M4 LINE L1 5067 5328 -818 987 147 13 0 chr18 3142165 3142321 -83535227 + AluJb SINE Alu 134 291 -21 2194 101 3 16 chr18 3142324 3142630 -83534918 + AluSq SINE Alu 1 302 -11 234 0 0 0 chr18 3142774 3142800 -83534748 + (A)n Simple_repeat Simple_repeat 1 26 0 2145 107 0 3 chr18 3142919 3143209 -83534339 - AluSc SINE Alu -20 289 1 742 274 43 67 chr18 3143376 3143792 -83533756 - MARNA DNA Mariner -103 483 78 278 160 0 160 chr18 3144342 3144420 -83533128 - Zaphod DNA AcHobo -2 4029 3971 744 124 143 100 chr18 3144420 3144630 -83532918 + MER20 DNA MER1_type 1 219 0 278 160 0 160 chr18 3144630 3144657 -83532891 - Zaphod DNA AcHobo -60 3971 3941 655 97 89 24 chr18 3144657 3144781 -83532767 + L1MA4 LINE L1 6164 6295 -5 234 341 61 0 chr18 3145777 3145909 -83531639 - MIR3 SINE MIR -15 193 54 184 127 42 42 chr18 3146018 3146089 -83531459 + CT-rich Low_complexity Low_complexity 2 72 0 1573 176 32 35 chr18 3146093 3146272 -83531276 - AluJo SINE Alu 0 312 133 2274 61 38 10 chr18 3146272 3146565 -83530983 - AluY SINE Alu -10 301 1 1573 176 32 35 chr18 3146565 3146698 -83530850 - AluJo SINE Alu -179 133 1 2512 157 67 78 chr18 3146728 3147245 -83530303 - L1MB4 LINE L1 -42 6138 5617 2209 107 3 0 chr18 3147245 3147536 -83530012 - AluSg1 SINE Alu -17 292 1 2512 157 67 78 chr18 3147536 3147548 -83530000 - L1MB4 LINE L1 -563 5617 5606 1327 212 58 7 chr18 3147548 3147822 -83529726 - AluJb SINE Alu -24 288 1 2512 157 67 78 chr18 3147822 3147959 -83529589 - L1MB4 LINE L1 -574 5606 5478 3219 181 75 21 chr18 3148619 3149329 -83528219 - L1MB4 LINE L1 -676 5498 4710 2123 124 3 0 chr18 3149329 3149627 -83527921 - AluSx SINE Alu -13 299 1 3219 181 75 21 chr18 3149627 3149975 -83527573 - L1MB4 LINE L1 -1464 4710 4382 438 278 39 39 chr18 3150065 3150245 -83527303 + MIR SINE MIR 77 256 -6 249 33 0 0 chr18 3151224 3151254 -83526294 + (T)n Simple_repeat Simple_repeat 1 30 0 1585 206 66 34 chr18 3151397 3151839 -83525709 - L1P LINE L1 -1907 4239 3784 2221 98 0 7 chr18 3151843 3152139 -83525409 - AluSq SINE Alu -19 294 1 1821 178 7 0 chr18 3152521 3152825 -83524723 + AluJb SINE Alu 1 306 -6 592 189 0 9 chr18 3152846 3152952 -83524596 + AluJb SINE Alu 195 299 -13 372 293 170 42 chr18 3153601 3153884 -83523664 - L1MC4 LINE L1 -120 7922 7604 962 226 143 0 chr18 3154058 3154337 -83523211 - MER33 DNA MER1_type -5 319 1 415 279 29 7 chr18 3154418 3154585 -83522963 - L1MC4a LINE L1 -495 7313 7175 453 233 183 58 chr18 3156413 3156790 -83520758 - MLT1J2 LTR MaLR -2 448 21 1969 152 0 13 chr18 3159466 3159776 -83517772 - AluSx SINE Alu -6 306 1 202 130 65 0 chr18 3159909 3159955 -83517593 + (TCTG)n Simple_repeat Simple_repeat 2 50 0 208 231 19 0 chr18 3160646 3160698 -83516850 + CT-rich Low_complexity Low_complexity 4 56 0 340 244 289 20 chr18 3161804 3162001 -83515547 - MIR SINE MIR -12 250 1 664 184 176 0 chr18 3163265 3163401 -83514147 - AluJo/FRAM SINE Alu -6 296 137 1588 158 114 11 chr18 3163404 3163676 -83513872 - AluJo SINE Alu -2 300 1 243 0 0 0 chr18 3165950 3165977 -83511571 + (T)n Simple_repeat Simple_repeat 1 27 0 1643 106 110 0 chr18 3166128 3166365 -83511183 - AluSx SINE Alu 0 312 50 21 0 0 0 chr18 3166482 3166503 -83511045 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr18 3167603 3167626 -83509922 + (T)n Simple_repeat Simple_repeat 1 23 0 349 321 30 30 chr18 3169332 3169466 -83508082 + MIR3 SINE MIR 10 143 -65 1410 171 48 22 chr18 3170293 3170608 -83506940 - MER33 DNA MER1_type 0 324 2 22 56 0 0 chr18 3171800 3171836 -83505712 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr18 3174479 3174508 -83503040 + AT_rich Low_complexity Low_complexity 1 29 0 499 160 13 0 chr18 3175035 3175110 -83502438 + AluS SINE Alu 1 76 -237 3448 193 90 77 chr18 3175516 3175964 -83501584 - L1MC4a LINE L1 -159 7649 7208 2043 119 20 7 chr18 3175964 3176266 -83501282 - AluSx SINE Alu -6 306 1 3448 193 90 77 chr18 3176266 3176928 -83500620 - L1MC4a LINE L1 -600 7208 6525 1619 156 53 3 chr18 3176969 3177251 -83500297 - AluJb SINE Alu -16 296 1 2087 98 7 0 chr18 3178555 3178832 -83498716 + AluSp SINE Alu 13 291 -22 362 307 100 0 chr18 3178992 3179141 -83498407 + MIR SINE MIR 47 209 -53 1546 193 0 23 chr18 3179160 3179466 -83498082 - AluJb SINE Alu -13 299 1 2042 71 64 11 chr18 3179799 3180080 -83497468 + AluY SINE Alu 3 298 -13 1970 217 85 20 chr18 3180127 3180210 -83497338 + L1ME1 LINE L1 5613 5689 -477 2074 127 96 9 chr18 3180210 3180542 -83497006 + MER46B DNA MER2_type 1 236 0 1970 217 85 20 chr18 3180542 3180964 -83496584 + L1ME1 LINE L1 5689 6151 -15 2155 98 14 10 chr18 3182087 3182410 -83495138 - AluSx SINE Alu 0 312 1 228 111 0 0 chr18 3182549 3182585 -83494963 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 271 224 75 0 chr18 3182586 3182653 -83494895 - L2 LINE L2 -8 3305 3234 26 0 0 0 chr18 3183410 3183436 -83494112 + AT_rich Low_complexity Low_complexity 1 26 0 277 284 147 9 chr18 3184361 3184470 -83493078 - MER5A DNA MER1_type -3 186 63 196 301 41 27 chr18 3184504 3184577 -83492971 - MER5A DNA MER1_type -115 74 1 203 341 50 45 chr18 3185454 3185633 -83491915 + L2 LINE L2 2933 3112 -160 447 306 175 5 chr18 3187618 3187824 -83489724 + MIR SINE MIR 18 258 -4 1851 171 0 3 chr18 3187938 3188236 -83489312 + AluJb SINE Alu 1 297 -15 1978 115 7 16 chr18 3188425 3188729 -83488819 - AluSx SINE Alu -11 301 1 213 304 200 33 chr18 3189143 3189383 -83488165 + L3 LINE CR1 1041 1320 -257 1292 161 125 69 chr18 3189492 3189827 -83487721 - MLT1A2 LTR MaLR 0 374 21 231 36 0 0 chr18 3189867 3189895 -83487653 + (T)n Simple_repeat Simple_repeat 1 28 0 27 0 0 0 chr18 3190009 3190036 -83487512 + AT_rich Low_complexity Low_complexity 1 27 0 2160 91 32 19 chr18 3190036 3190344 -83487204 - AluSx SINE Alu 0 312 1 322 300 0 0 chr18 3190507 3190577 -83486971 - MLT1K LTR MaLR -234 354 285 1432 170 8 4 chr18 3190716 3190951 -83486597 - MER46A DNA MER2_type 0 236 1 540 298 78 36 chr18 3191118 3191450 -83486098 - MARNA DNA Mariner -7 579 234 2241 202 88 43 chr18 3191568 3191867 -83485681 - L1MC4a LINE L1 -892 6916 6632 306 0 0 0 chr18 3191867 3191901 -83485647 + (CA)n Simple_repeat Simple_repeat 2 35 0 2241 202 88 43 chr18 3191901 3192246 -83485302 - L1MC4a LINE L1 -1176 6632 6243 191 61 30 0 chr18 3192259 3192292 -83485256 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 2195 91 11 0 chr18 3192294 3192579 -83484969 - AluSq SINE Alu -25 288 1 2575 147 33 21 chr18 3192621 3193042 -83484506 + MSTB LTR MaLR 1 426 0 484 229 42 3 chr18 3193142 3193288 -83484260 - Tigger6 DNA MER2_type -874 209 1 30 27 0 0 chr18 3193336 3193373 -83484175 + AT_rich Low_complexity Low_complexity 1 37 0 27 0 0 0 chr18 3194352 3194379 -83483169 + AT_rich Low_complexity Low_complexity 1 27 0 447 259 92 35 chr18 3195274 3195448 -83482100 - L1MC4a LINE L1 -1926 5882 5699 2244 101 10 0 chr18 3195770 3196068 -83481480 - AluSx SINE Alu -11 301 1 1786 179 0 13 chr18 3198087 3198394 -83479154 - AluJo SINE Alu -8 304 2 2128 101 38 0 chr18 3199109 3199397 -83478151 + AluSx SINE Alu 1 299 -13 301 250 48 24 chr18 3200216 3200300 -83477248 + MIR3 SINE MIR 99 184 -24 2628 52 3 0 chr18 3203561 3203871 -83473677 + AluY SINE Alu 1 311 0 300 102 0 0 chr18 3204025 3204074 -83473474 + (A)n Simple_repeat Simple_repeat 1 49 0 2063 98 0 27 chr18 3205761 3206056 -83471492 + AluSx SINE Alu 1 287 -25 405 0 0 0 chr18 3206056 3206101 -83471447 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 0 0 0 chr18 3208129 3208151 -83469397 + AT_rich Low_complexity Low_complexity 1 22 0 222 214 0 0 chr18 3208326 3208368 -83469180 + L2 LINE L2 3271 3312 -1 389 182 11 23 chr18 3208473 3208561 -83468987 - L1MD1 LINE L1 0 6242 6156 2378 97 0 3 chr18 3209881 3210191 -83467357 + AluSx SINE Alu 1 309 -3 225 0 0 0 chr18 3210342 3210367 -83467181 + (A)n Simple_repeat Simple_repeat 1 25 0 276 30 0 0 chr18 3211241 3211274 -83466274 + (CA)n Simple_repeat Simple_repeat 2 34 0 488 213 0 0 chr18 3211502 3211596 -83465952 - L1ME2 LINE L1 -6 6158 6065 2199 106 0 0 chr18 3212763 3213056 -83464492 - AluSg1 SINE Alu -16 293 1 332 261 172 12 chr18 3213536 3213706 -83463842 + MIR SINE MIR 20 214 -48 1851 168 0 7 chr18 3214349 3214653 -83462895 - AluJo SINE Alu -6 306 5 21 0 0 0 chr18 3214914 3214935 -83462613 + AT_rich Low_complexity Low_complexity 1 21 0 1602 197 0 26 chr18 3215519 3215829 -83461719 - AluJo SINE Alu -10 302 1 2254 110 0 0 chr18 3216168 3216459 -83461089 - AluSx SINE Alu -21 291 1 234 0 0 0 chr18 3217129 3217155 -83460393 + (T)n Simple_repeat Simple_repeat 1 26 0 458 127 25 13 chr18 3217293 3217372 -83460176 + AluSg/x SINE Alu 209 288 -21 2118 120 3 0 chr18 3217759 3218081 -83459467 - AluSq SINE Alu 0 323 1 2325 78 14 3 chr18 3219123 3219419 -83458129 + AluSx SINE Alu 1 299 -13 2143 113 0 13 chr18 3219706 3220007 -83457541 + AluSx SINE Alu 1 297 -15 285 224 19 9 chr18 3220007 3220114 -83457434 + (TA)n Simple_repeat Simple_repeat 1 108 0 2052 142 45 6 chr18 3220977 3221329 -83456219 - MER47A DNA MER2_type 0 366 1 22 35 0 0 chr18 3221369 3221398 -83456150 + AT_rich Low_complexity Low_complexity 1 29 0 1993 158 0 0 chr18 3222153 3222444 -83455104 + AluJb SINE Alu 2 292 -20 1088 263 54 26 chr18 3224521 3224871 -83452677 - L2 LINE L2 0 3313 2954 23 68 0 0 chr18 3225631 3225675 -83451873 + AT_rich Low_complexity Low_complexity 1 44 0 1258 178 175 72 chr18 3226006 3226462 -83451086 - MLT1D LTR MaLR -1 504 2 702 201 0 22 chr18 3226610 3226744 -83450804 - FLAM_A SINE Alu -2 131 1 29 0 0 0 chr18 3227416 3227445 -83450103 + AT_rich Low_complexity Low_complexity 1 29 0 2318 87 0 3 chr18 3227460 3227758 -83449790 - AluSg SINE Alu -13 297 1 2079 130 0 16 chr18 3228047 3228363 -83449185 - AluSx SINE Alu -1 311 1 342 0 0 0 chr18 3228718 3228756 -83448792 + (TG)n Simple_repeat Simple_repeat 2 39 0 1879 115 4 0 chr18 3228757 3229010 -83448538 - AluSx SINE Alu -14 298 45 312 27 0 0 chr18 3229586 3229623 -83447925 + (TTTTA)n Simple_repeat Simple_repeat 2 38 0 1958 86 37 7 chr18 3229626 3229895 -83447653 - AluSx SINE Alu -35 277 1 208 184 0 20 chr18 3230894 3230943 -83446605 + (TA)n Simple_repeat Simple_repeat 2 49 0 243 103 35 17 chr18 3230959 3231017 -83446531 + (TA)n Simple_repeat Simple_repeat 2 60 0 188 289 36 72 chr18 3231625 3231708 -83445840 - L2 LINE L2 0 3272 3193 7758 20 1 0 chr18 3231937 3232888 -83444660 + L1PA3 LINE L1 5203 6154 -1 216 0 0 0 chr18 3232893 3232917 -83444631 + (TAAAA)n Simple_repeat Simple_repeat 3 26 0 211 356 246 14 chr18 3232917 3233151 -83444397 - L2 LINE L2 -449 2865 2687 2093 121 3 0 chr18 3233151 3233448 -83444100 + AluSq SINE Alu 3 300 -13 211 356 246 14 chr18 3233448 3233708 -83443840 - L2 LINE L2 -627 2687 2256 693 209 305 24 chr18 3233989 3234238 -83443310 - L2 LINE L2 0 3313 2995 344 315 79 0 chr18 3235566 3235693 -83441855 - L2 LINE L2 -2 3270 3134 2272 89 3 0 chr18 3236030 3236321 -83441227 + AluSg SINE Alu 1 292 -18 323 216 155 35 chr18 3236414 3236530 -83441018 + L1MB5 LINE L1 6018 6147 -27 452 350 164 8 chr18 3238562 3239051 -83438497 - L2 LINE L2 -720 2594 2030 266 106 21 0 chr18 3239053 3239100 -83438448 + (TA)n Simple_repeat Simple_repeat 1 48 0 276 289 29 0 chr18 3239623 3239727 -83437821 + L1M4 LINE L1 3625 3731 -2415 351 332 144 43 chr18 3239758 3240014 -83437534 - L2 LINE L2 -4 3268 2987 1916 149 7 0 chr18 3240104 3240399 -83437149 + AluJb SINE Alu 3 299 -13 467 352 115 28 chr18 3240426 3240957 -83436591 - L2 LINE L2 -452 2862 2286 525 32 0 0 chr18 3240972 3241035 -83436513 + (TG)n Simple_repeat Simple_repeat 2 64 0 38 51 0 0 chr18 3241803 3241862 -83435686 + AT_rich Low_complexity Low_complexity 1 59 0 24 32 0 0 chr18 3243125 3243156 -83434392 + AT_rich Low_complexity Low_complexity 1 31 0 350 41 0 20 chr18 3243652 3243701 -83433847 + (TA)n Simple_repeat Simple_repeat 1 48 0 393 263 177 17 chr18 3243701 3243876 -83433672 - L1ME LINE L1 -345 5776 5574 28 29 0 0 chr18 3243876 3243911 -83433637 + AT_rich Low_complexity Low_complexity 1 35 0 2097 140 0 0 chr18 3243915 3244207 -83433341 - AluSx SINE Alu -20 292 1 669 177 0 46 chr18 3245087 3245217 -83432331 + FLAM_A SINE Alu 5 128 -5 2360 102 0 0 chr18 3246747 3247050 -83430498 - AluSq SINE Alu -10 303 1 678 182 40 0 chr18 3247704 3247852 -83429696 - MER105 DNA DNA -4 200 47 346 281 0 21 chr18 3247874 3247970 -83429578 + MIR3 SINE MIR 100 193 -15 2259 101 13 0 chr18 3247981 3248288 -83429260 - AluSx SINE Alu 0 312 2 1097 225 9 0 chr18 3248815 3249028 -83428520 + MER58A DNA MER1_type 1 215 -9 710 274 38 15 chr18 3249249 3249589 -83427959 + L1ME3A LINE L1 4947 5294 -852 402 275 38 23 chr18 3249726 3249857 -83427691 + L1ME3A LINE L1 5451 5583 -750 2283 91 0 0 chr18 3249858 3250326 -83427222 + AluSc SINE Alu 1 468 0 1146 110 0 11 chr18 3250144 3250362 -83427186 + (GAAA)n Simple_repeat Simple_repeat 1 216 0 1267 250 58 23 chr18 3250445 3250873 -83426675 + MLT1C LTR MaLR 6 448 -19 1375 169 65 34 chr18 3250930 3251370 -83426178 - MLT1D LTR MaLR -2 503 1 328 268 102 8 chr18 3251371 3251512 -83426036 + L1ME3A LINE L1 5727 5885 -281 1940 163 3 0 chr18 3251725 3252026 -83425522 - AluSx SINE Alu -10 302 1 23 68 0 0 chr18 3252065 3252109 -83425439 + AT_rich Low_complexity Low_complexity 1 44 0 1369 144 110 24 chr18 3252416 3252490 -83425058 - MER46B DNA MER2_type -2495 236 170 233 29 29 0 chr18 3252490 3252524 -83425024 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1369 144 110 24 chr18 3252524 3252740 -83424808 - MER46B DNA MER2_type -2561 170 46 1121 170 24 2 chr18 3252740 3252988 -83424560 + AluJb SINE Alu 1 302 -10 737 169 13 65 chr18 3253051 3253205 -83424343 + MER58B DNA MER1_type 195 340 -1 265 289 135 0 chr18 3253331 3253435 -83424113 - MIR3 SINE MIR -7 201 84 376 150 113 0 chr18 3253758 3253838 -83423710 + MER3 DNA MER1_type 9 97 -112 5414 136 43 3 chr18 3253864 3254799 -83422749 + L1MA4 LINE L1 5329 6300 0 1115 200 40 4 chr18 3254803 3255028 -83422520 + L1PA16 LINE L1 5805 6037 -129 260 189 108 0 chr18 3255036 3255110 -83422438 + L1PA16 LINE L1 6082 6163 -3 408 95 0 147 chr18 3255135 3255205 -83422343 + MER5A DNA MER1_type 9 54 -135 1716 163 7 30 chr18 3255205 3255365 -83422183 - AluJo SINE Alu -24 288 137 2187 129 3 3 chr18 3255365 3255675 -83421873 - AluSx SINE Alu -2 310 1 1716 163 7 30 chr18 3255675 3255809 -83421739 - AluJo SINE Alu -175 137 1 408 95 0 147 chr18 3255809 3255858 -83421690 + MER5A DNA MER1_type 54 109 -80 1639 206 34 123 chr18 3255892 3256485 -83421063 - L1ME1 LINE L1 -44 6122 5477 2241 126 3 0 chr18 3256485 3256786 -83420762 + AluSx SINE Alu 1 302 -10 704 112 9 0 chr18 3256792 3256899 -83420649 + HY1 scRNA scRNA 1 108 -4 811 60 26 0 chr18 3256900 3257017 -83420531 + (GAAA)n Simple_repeat Simple_repeat 1 120 0 1639 206 34 123 chr18 3257017 3257128 -83420420 - L1ME1 LINE L1 -574 5592 5473 330 269 86 0 chr18 3257135 3257228 -83420320 - L3 LINE CR1 -141 1436 1336 314 256 83 95 chr18 3257281 3257449 -83420099 - HAL1b LINE L1 -1182 166 1 4536 178 111 70 chr18 3257458 3257602 -83419946 - L1MC4 LINE L1 -5 8037 7900 1703 174 0 22 chr18 3257602 3257877 -83419671 - AluJo SINE Alu -25 287 19 4536 178 111 70 chr18 3257877 3258169 -83419379 - L1MC4 LINE L1 -142 7900 7621 191 32 65 0 chr18 3258169 3258200 -83419348 + T-rich Low_complexity Low_complexity 2 34 0 2103 114 7 0 chr18 3258202 3258482 -83419066 - AluSx SINE Alu -30 282 1 4536 178 111 70 chr18 3258482 3258974 -83418574 - L1MC4 LINE L1 -421 7621 7150 2511 85 0 13 chr18 3258974 3259291 -83418257 - AluSp SINE Alu 0 313 1 4536 178 111 70 chr18 3259291 3259582 -83417966 - L1MC4 LINE L1 -892 7150 6872 1621 170 24 14 chr18 3259582 3259871 -83417677 + AluJo SINE Alu 12 303 -9 4536 178 111 70 chr18 3259871 3259957 -83417591 - L1MC4 LINE L1 -1170 6872 6791 2294 120 0 0 chr18 3259957 3260265 -83417283 + AluSx SINE Alu 1 308 -4 4536 178 111 70 chr18 3260265 3260371 -83417177 - L1MC4 LINE L1 -1251 6791 6562 1645 279 37 2 chr18 3260374 3260855 -83416693 + ERVL LTR ERVL 929 1426 -3570 263 221 182 0 chr18 3260972 3261049 -83416499 + ERVL LTR ERVL 2670 2760 -3004 284 91 55 0 chr18 3261080 3261135 -83416413 - L1MC2 LINE L1 -5 6339 6282 624 287 20 20 chr18 3261157 3261352 -83416196 + ERVL LTR ERVL 1664 1858 -3138 343 85 34 0 chr18 3261352 3261411 -83416137 - Alu SINE Alu -1 301 241 2397 103 3 0 chr18 3261577 3261887 -83415661 - AluSq SINE Alu -2 311 1 2083 131 20 7 chr18 3262449 3262746 -83414802 + AluSx SINE Alu 1 301 -11 2170 91 10 20 chr18 3269203 3269501 -83408047 + AluSx SINE Alu 1 295 -17 2198 107 10 10 chr18 3272684 3272992 -83404556 + AluSx SINE Alu 1 308 -4 2842 170 115 18 chr18 3273376 3274004 -83403544 + MER50 LTR ERV1 14 702 -32 416 331 0 0 chr18 3276478 3276632 -83400916 + (TGGA)n Simple_repeat Simple_repeat 4 157 0 275 223 0 10 chr18 3276672 3276775 -83400773 + (TGGA)n Simple_repeat Simple_repeat 1 102 0 255 295 196 0 chr18 3277223 3277335 -83400213 + MIR SINE MIR 119 252 -10 292 294 92 0 chr18 3277456 3277565 -83399983 - MIR SINE MIR -78 184 66 23 78 0 0 chr18 3278417 3278468 -83399080 + GC_rich Low_complexity Low_complexity 1 51 0 1659 101 4 76 chr18 3279102 3279379 -83398169 + AluSx SINE Alu 1 257 -55 1535 158 56 0 chr18 3279387 3279671 -83397877 + L1MA3 LINE L1 6006 6305 0 720 234 85 5 chr18 3279780 3279968 -83397580 - MER105 DNA DNA -1 203 1 274 294 124 20 chr18 3280011 3280164 -83397384 + HAL1 LINE L1 493 661 -1846 2165 259 95 40 chr18 3280198 3281278 -83396270 + HAL1 LINE L1 806 1945 -562 467 253 137 33 chr18 3281480 3281662 -83395886 + HAL1 LINE L1 2271 2471 -36 200 288 144 22 chr18 3282272 3282411 -83395137 + L2 LINE L2 2686 2841 -473 340 319 116 36 chr18 3282442 3282771 -83394777 + L2 LINE L2 2917 3271 -1 1798 186 3 3 chr18 3284538 3284845 -83392703 + AluJo SINE Alu 1 307 -5 2359 94 7 0 chr18 3285222 3285529 -83392019 + AluSx SINE Alu 1 309 -3 242 146 0 0 chr18 3285529 3285570 -83391978 + L1M4 LINE L1 4628 4668 -1478 1942 152 14 10 chr18 3287146 3287442 -83390106 - AluJo SINE Alu -15 297 1 496 313 113 13 chr18 3287795 3288025 -83389523 + L2 LINE L2 2722 2974 -340 951 122 0 0 chr18 3288038 3288169 -83389379 - FLAM_C SINE Alu -10 133 3 1429 151 6 119 chr18 3288218 3288537 -83389011 + AluJb SINE Alu 3 285 -27 230 133 40 13 chr18 3288537 3288550 -83388998 + (TA)n Simple_repeat Simple_repeat 2 13 -65 2278 107 3 0 chr18 3288550 3288840 -83388708 + AluSq SINE Alu 1 291 -22 230 133 40 13 chr18 3288840 3288901 -83388647 + (TA)n Simple_repeat Simple_repeat 13 78 0 804 252 60 43 chr18 3289220 3289625 -83387923 + MLT1H1 LTR MaLR 139 549 0 182 293 242 19 chr18 3289766 3289981 -83387567 + L2 LINE L2 3010 3272 0 271 256 131 80 chr18 3290004 3290141 -83387407 + L2 LINE L2 3119 3262 -10 238 321 17 14 chr18 3291132 3291232 -83386316 + MIR SINE MIR 10 111 -97 188 0 74 0 chr18 3291488 3291515 -83386033 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 209 240 20 20 chr18 3291515 3291565 -83385983 - L2 LINE L2 -13 3300 3251 310 197 70 0 chr18 3291857 3291928 -83385620 - MER5C DNA MER1_type -14 310 235 2084 147 0 0 chr18 3291956 3292256 -83385292 - AluSx SINE Alu -12 300 1 337 316 60 0 chr18 3292256 3292373 -83385175 - MER5C DNA MER1_type -200 124 1 429 326 30 8 chr18 3294601 3294733 -83382815 + MIR SINE MIR 5 139 -123 716 155 47 16 chr18 3295208 3295337 -83382211 + FLAM_A SINE Alu 10 142 0 2247 132 0 0 chr18 3295589 3295899 -83381649 + AluSx SINE Alu 3 312 0 255 61 0 0 chr18 3295905 3295938 -83381610 + (A)n Simple_repeat Simple_repeat 1 33 0 2189 104 3 46 chr18 3296068 3296394 -83381154 - AluSx SINE Alu 0 312 1 23 33 0 0 chr18 3296522 3296552 -83380996 + AT_rich Low_complexity Low_complexity 1 30 0 2925 9 0 6 chr18 3296552 3296870 -83380678 - AluYb8 SINE Alu -2 316 1 3569 79 15 0 chr18 3297396 3297863 -83379685 - L1PA8 LINE L1 -2 6170 5697 2287 107 3 0 chr18 3297972 3298270 -83379278 + AluSq SINE Alu 5 303 -10 28 29 0 0 chr18 3298276 3298311 -83379237 + AT_rich Low_complexity Low_complexity 1 35 0 2199 120 0 7 chr18 3298387 3298696 -83378852 - AluSx SINE Alu 0 312 6 27 0 0 0 chr18 3298772 3298799 -83378749 + AT_rich Low_complexity Low_complexity 1 27 0 2250 120 0 0 chr18 3299321 3299622 -83377926 + AluSx SINE Alu 1 301 -11 379 260 21 45 chr18 3299690 3299891 -83377657 + L1MC4 LINE L1 1921 6983 -1339 300 233 0 17 chr18 3299860 3299920 -83377628 - L1MCa LINE L1 -4362 2064 2006 * 218 366 52 45 chr18 3299922 3300056 -83377492 + MIR SINE MIR 25 159 -103 248 293 79 30 chr18 3300474 3300638 -83376910 + L1ME4a LINE L1 5528 5699 -422 1203 135 28 47 chr18 3300644 3300859 -83376689 + AluJo SINE Alu 3 213 -99 426 246 173 52 chr18 3300872 3301063 -83376485 + L1ME4a LINE L1 5692 5905 -216 386 254 42 17 chr18 3301377 3301495 -83376053 - L2 LINE L2 -1 3312 3192 348 176 0 0 chr18 3302794 3302862 -83374686 + A-rich Low_complexity Low_complexity 1 68 0 2561 63 0 0 chr18 3303217 3303517 -83374031 - AluY SINE Alu -11 300 1 753 267 123 19 chr18 3303629 3303986 -83373562 + L1ME4a LINE L1 5500 5899 -222 847 213 26 0 chr18 3303986 3304141 -83373407 + FRAM SINE Alu 1 159 -7 753 267 123 19 chr18 3304141 3304157 -83373391 + L1ME4a LINE L1 5899 5912 -209 2393 165 33 24 chr18 3304189 3304613 -83372935 - MSTB1 LTR MaLR -4 428 1 2050 243 109 19 chr18 3304679 3305570 -83371978 + HAL1 LINE L1 1452 2477 -30 470 197 58 51 chr18 3305684 3305821 -83371727 + L2 LINE L2 3176 3313 0 2414 85 3 0 chr18 3306133 3306438 -83371110 + AluSx SINE Alu 1 306 -6 2051 125 28 0 chr18 3307405 3307693 -83369855 + AluSx SINE Alu 1 296 -16 2591 55 0 3 chr18 3307695 3308003 -83369545 + AluY SINE Alu 1 307 -4 1492 175 57 24 chr18 3308887 3309054 -83368494 - AluJo SINE Alu -5 307 124 2270 104 3 7 chr18 3309054 3309351 -83368197 - AluSq SINE Alu -17 296 1 1492 175 57 24 chr18 3309351 3309480 -83368068 - AluJo SINE Alu -188 124 1 631 237 30 7 chr18 3309501 3309636 -83367912 - MER5B DNA MER1_type 0 178 41 443 231 46 9 chr18 3309782 3309890 -83367658 - MIR SINE MIR -105 157 46 281 291 150 16 chr18 3310978 3311105 -83366443 - MER5B DNA MER1_type -28 150 7 284 319 101 8 chr18 3311803 3311922 -83365626 + L2 LINE L2 3120 3249 -64 1677 172 17 10 chr18 3311944 3312234 -83365314 + AluJo SINE Alu 1 292 -20 2160 92 0 7 chr18 3312292 3312573 -83364975 - AluSx SINE Alu -32 280 2 460 225 125 38 chr18 3312574 3312734 -83364814 - MER3 DNA MER1_type -82 127 1 1884 148 18 52 chr18 3313395 3313441 -83364107 - L1MB3 LINE L1 0 6183 6137 2281 123 0 0 chr18 3313441 3313743 -83363805 - AluSx SINE Alu -10 302 1 1884 148 18 52 chr18 3313743 3314080 -83363468 - L1MB3 LINE L1 -46 6137 5813 2265 96 20 3 chr18 3314149 3314450 -83363098 - AluSx SINE Alu -6 306 1 184 279 139 13 chr18 3314771 3314850 -83362698 + L3b LINE CR1 1495 1583 0 2564 39 0 0 chr18 3315180 3315465 -83362083 - AluY SINE Alu -24 287 3 2520 63 0 7 chr18 3315671 3315972 -83361576 + AluSc SINE Alu 1 299 -10 818 191 0 0 chr18 3317597 3317728 -83359820 + FLAM_A SINE Alu 1 131 -2 2596 43 0 10 chr18 3318200 3318525 -83359023 - AluY SINE Alu 0 311 1 2228 125 3 0 chr18 3318526 3318822 -83358726 - AluSx SINE Alu -15 297 1 724 153 0 0 chr18 3319431 3319542 -83358006 + FLAM_C SINE Alu 3 113 -30 860 121 0 8 chr18 3320575 3320699 -83356849 + FLAM_C SINE Alu 2 124 -19 848 204 15 57 chr18 3320791 3321170 -83356378 + MLT1B LTR MaLR 1 368 -99 1978 152 23 0 chr18 3321688 3321991 -83355557 - AluJb SINE Alu -2 310 1 372 22 0 0 chr18 3322137 3322182 -83355366 + (CA)n Simple_repeat Simple_repeat 2 46 0 967 227 81 32 chr18 3322184 3322219 -83355329 + L1ME2 LINE L1 5796 5828 -336 835 165 0 8 chr18 3322219 3322346 -83355202 + FLAM_A SINE Alu 1 126 -7 967 227 81 32 chr18 3322346 3322654 -83354894 + L1ME2 LINE L1 5828 6156 -8 326 138 0 31 chr18 3323070 3323135 -83354413 + L1PB1 LINE L1 3511 3573 -2573 207 0 0 0 chr18 3323136 3323159 -83354389 + (TCTCCC)n Simple_repeat Simple_repeat 2 24 0 10763 38 3 78 chr18 3323159 3324604 -83352944 + SVA Other Other 51 1389 0 27 0 0 0 chr18 3324637 3324664 -83352884 + AT_rich Low_complexity Low_complexity 1 27 0 4466 180 5 19 chr18 3324664 3325609 -83351939 + L1PB1 LINE L1 3561 4492 -1654 * 41811 43 9 1 chr18 3325607 3331713 -83345835 + L1PA4 LINE L1 1 6154 -1 6038 149 3 6 chr18 3331684 3333014 -83344534 + L1PB1 LINE L1 4457 5789 -362 * 2244 104 13 7 chr18 3333014 3333322 -83344226 + AluSx SINE Alu 1 310 -2 675 94 0 0 chr18 3333331 3333427 -83344121 + (TA)n Simple_repeat Simple_repeat 2 97 0 6038 149 3 6 chr18 3333427 3333785 -83343763 + L1PB1 LINE L1 5797 6151 0 903 135 0 8 chr18 3335723 3335856 -83341692 - FLAM_A SINE Alu -1 132 1 325 333 8 0 chr18 3336156 3336279 -83341269 - MIR SINE MIR -56 152 29 1802 167 41 3 chr18 3337146 3337439 -83340109 - AluJo SINE Alu -8 304 1 190 261 0 0 chr18 3338270 3338316 -83339232 + MIR SINE MIR 46 91 -171 2310 105 0 0 chr18 3339131 3339426 -83338122 + AluSx SINE Alu 1 295 -17 425 306 44 31 chr18 3339998 3340158 -83337390 + MIR SINE MIR 85 246 -16 2004 145 11 0 chr18 3340511 3340794 -83336754 - AluJo SINE Alu -26 286 1 1283 171 4 22 chr18 3341324 3341552 -83335996 + AluJo SINE Alu 85 308 -4 1962 145 6 46 chr18 3341710 3342035 -83335513 + AluSx SINE Alu 1 312 0 30 27 0 0 chr18 3343969 3344006 -83333542 + GC_rich Low_complexity Low_complexity 1 37 0 21 82 0 0 chr18 3344761 3344810 -83332738 + GC_rich Low_complexity Low_complexity 1 49 0 2242 96 0 35 chr18 3346212 3346525 -83331023 + AluSp SINE Alu 1 302 -11 282 306 16 66 chr18 3347149 3347270 -83330278 - L2 LINE L2 -3 3269 3155 1838 188 0 3 chr18 3347432 3347741 -83329807 - AluJb SINE Alu -4 308 1 1133 174 0 11 chr18 3347754 3347944 -83329604 - AluJo SINE Alu 0 312 125 1468 165 4 29 chr18 3347947 3348189 -83329359 - AluJo SINE Alu -76 236 1 1674 137 8 15 chr18 3348922 3349184 -83328364 - AluJb SINE Alu -7 305 46 2052 148 3 0 chr18 3349510 3349808 -83327740 - AluJb SINE Alu -8 304 6 415 323 97 15 chr18 3350398 3350593 -83326955 + MIR SINE MIR 52 262 0 1779 141 48 4 chr18 3350795 3351064 -83326484 + AluSx SINE Alu 14 294 -18 1889 189 3 31 chr18 3351748 3352139 -83325409 + MER82 DNA MER2_type 2 381 -272 * 2333 127 66 29 chr18 3352129 3352254 -83325294 - MER50 LTR ERV1 -23 711 592 2394 103 0 0 chr18 3352254 3352565 -83324983 + AluSx SINE Alu 2 312 0 2333 127 66 29 chr18 3352565 3352850 -83324698 - MER50 LTR ERV1 -142 592 286 3124 65 69 7 chr18 3352850 3353268 -83324280 + MLT2A1 LTR ERVL 1 444 0 32854 56 4 0 chr18 3353268 3358893 -83318655 + HERVL-A1 LTR ERVL 1 5654 0 2753 75 23 29 chr18 3358893 3358990 -83318558 + MLT2A1 LTR ERVL 1 97 -347 2383 61 7 3 chr18 3358990 3359285 -83318263 - AluY SINE Alu -15 296 1 2753 75 23 29 chr18 3359285 3359572 -83317976 + MLT2A1 LTR ERVL 97 383 -61 236 174 0 0 chr18 3359572 3359618 -83317930 + L1MC4 LINE L1 6622 6667 -1375 341 130 0 0 chr18 3359626 3359680 -83317868 + MLT2A2 LTR ERVL 400 453 0 1831 91 14 39 chr18 3359680 3359966 -83317582 - MER50 LTR ERV1 -444 290 12 1215 247 40 4 chr18 3359971 3360246 -83317302 + MER82 DNA MER2_type 368 652 -1 2330 101 0 0 chr18 3360360 3360658 -83316890 + AluSx SINE Alu 1 298 -14 1609 115 0 5 chr18 3361202 3361419 -83316129 + AluSx SINE Alu 1 216 -96 225 94 0 0 chr18 3361426 3361458 -83316090 + (A)n Simple_repeat Simple_repeat 1 32 0 348 289 7 63 chr18 3361524 3361666 -83315882 - MER94 DNA DNA 0 134 1 2189 99 0 7 chr18 3362150 3362442 -83315106 - AluSc SINE Alu -19 290 1 1620 129 0 4 chr18 3362496 3362729 -83314819 + AluSg SINE Alu 62 293 -17 318 143 89 0 chr18 3362730 3362786 -83314762 + AluSc SINE Alu 116 176 -123 998 163 0 7 chr18 3362857 3363010 -83314538 - AluJo SINE Alu -24 288 137 2387 78 0 10 chr18 3363516 3363823 -83313725 + AluY SINE Alu 1 304 -7 629 191 9 0 chr18 3363823 3363928 -83313620 - FRAM SINE Alu -30 146 41 788 78 0 0 chr18 3363928 3364030 -83313518 + MSTB1 LTR MaLR 331 432 0 433 228 34 40 chr18 3364035 3364184 -83313364 + L1ME LINE L1 5550 5697 -465 502 294 25 0 chr18 3364202 3364365 -83313183 - L1ME3A LINE L1 -48 6122 5956 765 183 0 15 chr18 3364376 3364507 -83313041 - AluJo SINE Alu -169 133 5 2122 134 3 0 chr18 3364516 3364814 -83312734 - AluSx SINE Alu -13 299 1 264 310 35 0 chr18 3364862 3364949 -83312599 + L2 LINE L2 3222 3311 -2 1906 95 48 0 chr18 3365741 3365993 -83311555 + AluSx SINE Alu 33 296 -16 913 234 34 86 chr18 3366502 3366785 -83310763 + L1ME3A LINE L1 5283 5536 -626 2629 158 24 5 chr18 3366785 3367208 -83310340 + MSTB1 LTR MaLR 2 432 0 913 234 34 86 chr18 3367208 3367364 -83310184 + L1ME3A LINE L1 5536 5699 -463 1427 139 0 19 chr18 3367367 3367582 -83309966 + AluJo SINE Alu 86 296 -16 751 242 23 65 chr18 3367586 3367651 -83309897 + L1ME3A LINE L1 5705 5771 -399 2187 130 0 0 chr18 3367651 3367959 -83309589 + AluSx SINE Alu 1 308 -4 751 242 23 65 chr18 3367959 3368153 -83309395 + L1ME3A LINE L1 5771 5953 -217 709 224 70 19 chr18 3368154 3368368 -83309180 + MLT1A1 LTR MaLR 77 301 -64 1886 162 13 3 chr18 3368371 3368680 -83308868 + AluJb SINE Alu 1 312 0 552 157 75 0 chr18 3368704 3368863 -83308685 + GA-rich Low_complexity Low_complexity 3 173 0 259 204 0 0 chr18 3368879 3368923 -83308625 + MLT1A1 LTR MaLR 331 374 0 478 194 0 10 chr18 3368924 3369027 -83308521 - L1 LINE L1 -2682 3464 3363 28 48 0 0 chr18 3369112 3369154 -83308394 + AT_rich Low_complexity Low_complexity 1 42 0 266 204 0 0 chr18 3369196 3369250 -83308298 - L1 LINE L1 -1801 4345 4292 242 237 79 0 chr18 3369289 3369365 -83308183 - L1M LINE L1 -764 5406 5325 337 109 0 0 chr18 3369365 3369420 -83308128 - AluSp/q SINE Alu 0 303 249 1538 181 0 15 chr18 3369436 3369706 -83307842 - AluJb SINE Alu -46 266 1 3634 150 30 7 chr18 3369759 3370789 -83306759 + ERVL LTR ERVL 4165 5269 -495 271 141 31 0 chr18 3370845 3370909 -83306639 + CT-rich Low_complexity Low_complexity 2 67 0 1490 218 3 55 chr18 3370909 3371257 -83306291 + MLT2B3 LTR ERVL 223 552 -2 763 207 112 11 chr18 3371260 3371439 -83306109 - L1M3 LINE L1 -485 6193 5997 505 135 0 115 chr18 3371441 3371522 -83306026 - Tigger5 DNA MER2_type 0 2323 2255 1842 142 7 20 chr18 3371522 3371824 -83305724 - AluJb SINE Alu -14 298 1 505 135 0 115 chr18 3371824 3371846 -83305702 - Tigger5 DNA MER2_type -68 2255 2232 387 227 23 23 chr18 3371865 3371953 -83305595 - Tigger5 DNA MER2_type -2235 88 1 5535 204 40 35 chr18 3371954 3372621 -83304927 - L1M3 LINE L1 -677 5995 5333 1867 111 85 0 chr18 3372621 3372892 -83304656 + AluSx SINE Alu 1 294 -18 5535 204 40 35 chr18 3372892 3373867 -83303681 - L1M3 LINE L1 -1339 5333 4364 1560 198 0 0 chr18 3373867 3374154 -83303394 - AluJb SINE Alu 0 312 26 1819 138 7 37 chr18 3374155 3374451 -83303097 - AluJb SINE Alu -20 292 6 5535 204 40 35 chr18 3374451 3374595 -83302953 - L1M3 LINE L1 -2307 4365 2520 3144 221 91 33 chr18 3374848 3375585 -83301963 - MER21B LTR ERV1 -72 791 12 2320 72 17 0 chr18 3375676 3375968 -83301580 - AluY SINE Alu -14 297 1 3757 192 132 40 chr18 3376050 3376172 -83301376 - L1M3 LINE L1 -4250 2396 2287 1845 132 40 0 chr18 3376172 3376482 -83301066 - AluSx SINE Alu 0 322 2 3757 192 132 40 chr18 3376482 3377374 -83300174 - L1M3 LINE L1 -4359 2287 1478 2568 47 0 10 chr18 3377374 3377673 -83299875 - AluY SINE Alu -15 296 1 3757 192 132 40 chr18 3377673 3377865 -83299683 - L1M3 LINE L1 -5168 1478 1305 303 93 0 0 chr18 3377865 3377908 -83299640 + (TG)n Simple_repeat Simple_repeat 2 44 0 3757 192 132 40 chr18 3377908 3378241 -83299307 - L1M3 LINE L1 -5341 1305 601 1396 183 129 8 chr18 3378254 3378517 -83299031 - AluJo SINE Alu -7 295 1 2118 70 92 0 chr18 3378739 3379012 -83298536 - AluY SINE Alu -13 298 1 5422 230 77 53 chr18 3379012 3380688 -83296860 - L1M4 LINE L1 -2392 4565 2931 1425 230 47 22 chr18 3380688 3381049 -83296499 - MLT1A2 LTR MaLR -4 370 1 5422 230 77 53 chr18 3381049 3381155 -83296393 - L1M4 LINE L1 -4026 2931 2829 2272 118 16 48 chr18 3381155 3381529 -83296019 + THE1B LTR MaLR 1 362 -2 12431 91 7 18 chr18 3381531 3382862 -83294686 + THE1B-int LTR MaLR 1 1313 -267 2328 101 0 3 chr18 3382862 3383159 -83294389 - AluSg SINE Alu -14 296 1 12431 91 7 18 chr18 3383159 3383425 -83294123 + THE1B-int LTR MaLR 1313 1580 0 2238 120 19 45 chr18 3383425 3383799 -83293749 + THE1B LTR MaLR 1 364 0 5422 230 77 53 chr18 3383799 3384203 -83293345 - L1M4 LINE L1 -4128 2829 2436 2339 101 0 3 chr18 3384203 3384509 -83293039 - AluSg SINE Alu -5 305 1 5422 230 77 53 chr18 3384509 3385248 -83292300 - L1M4 LINE L1 -4521 2436 1561 1205 112 55 1 chr18 3385262 3385507 -83292041 - L1PA16 LINE L1 -9 6157 5870 1610 174 87 35 chr18 3385507 3385910 -83291638 - L1M4 LINE L1 -5265 1594 1171 269 200 0 0 chr18 3385942 3385992 -83291556 - L1M4 LINE L1 -5772 1087 1038 1006 125 7 0 chr18 3385995 3386147 -83291401 + LTR43 LTR ERV1 390 542 -60 891 269 71 28 chr18 3386157 3386439 -83291109 - L1M4 LINE L1 -6077 782 489 1011 266 96 17 chr18 3386459 3386812 -83290736 - L1M4 LINE L1 -6410 449 69 657 238 0 8 chr18 3387741 3387867 -83289681 + FLAM_A SINE Alu 5 129 -4 1310 148 4 86 chr18 3388118 3388375 -83289173 + MER46A DNA MER2_type 1 236 0 273 29 0 0 chr18 3388939 3388973 -83288575 + (TA)n Simple_repeat Simple_repeat 1 34 0 449 217 147 6 chr18 3390288 3390445 -83287103 + MER104 DNA MER2_type 2 180 0 204 224 40 13 chr18 3390465 3390541 -83287007 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 332 298 301 23 chr18 3390877 3391186 -83286362 - HAL1 LINE L1 -1044 1463 1069 842 143 0 36 chr18 3391533 3391673 -83285875 + AluJo SINE Alu 1 135 -177 294 254 140 46 chr18 3392138 3392371 -83285177 + HAL1 LINE L1 1590 1890 -617 288 184 0 115 chr18 3392570 3392657 -83284891 + HAL1 LINE L1 2071 2147 -360 1321 151 81 21 chr18 3392787 3393071 -83284477 + MER33 DNA MER1_type 1 301 -23 349 229 111 33 chr18 3393405 3393558 -83283990 - L1MC5 LINE L1 -61 7900 7736 317 317 85 40 chr18 3393953 3394177 -83283371 + L2 LINE L2 2807 3040 -273 2149 102 28 0 chr18 3394233 3394517 -83283031 - AluSq SINE Alu -12 301 10 209 208 192 77 chr18 3394540 3394670 -83282878 + L2 LINE L2 3166 3310 -3 30 27 0 0 chr18 3395191 3395228 -83282320 + AT_rich Low_complexity Low_complexity 1 37 0 1878 166 0 7 chr18 3395285 3395580 -83281968 + AluSx SINE Alu 1 293 -19 2172 94 19 19 chr18 3396809 3397117 -83280431 + AluY SINE Alu 1 308 -3 385 276 102 42 chr18 3397228 3397493 -83280055 + L1ME4a LINE L1 5839 6119 -2 1216 142 26 177 chr18 3397643 3397982 -83279566 - AluJb SINE Alu -11 301 14 397 171 0 40 chr18 3398021 3398097 -83279451 + MER58 DNA MER1_type 2318 2390 -30 2420 60 27 7 chr18 3398487 3398786 -83278762 - AluY SINE Alu -6 305 1 303 274 60 0 chr18 3399231 3399315 -83278233 + L1MC5 LINE L1 7797 7885 -76 498 139 0 47 chr18 3399583 3399669 -83277879 - MER44D DNA MER2_type 0 705 624 1830 158 73 21 chr18 3399670 3399999 -83277549 - MER7A DNA MER2_type 0 346 3 1309 276 51 36 chr18 3400202 3400610 -83276938 - L1MEc LINE L1 -5881 515 98 1319 160 176 4 chr18 3400610 3400860 -83276688 - AluJo SINE Alu -9 293 1 1309 276 51 36 chr18 3400860 3400925 -83276623 - L1MEc LINE L1 -6298 98 35 367 320 75 18 chr18 3401007 3401235 -83276313 - L1 LINE L1 -1741 4405 4165 512 200 167 20 chr18 3401237 3401387 -83276161 - L1MA4 LINE L1 0 6300 6129 2186 119 0 3 chr18 3401396 3401690 -83275858 - AluSx SINE Alu -19 293 1 1295 158 77 0 chr18 3401690 3401924 -83275624 - MER44D DNA MER2_type -83 526 5 2269 85 3 3 chr18 3401972 3402266 -83275282 - AluSg SINE Alu -16 294 1 530 155 0 24 chr18 3402394 3402478 -83275070 - Tigger5 DNA MER2_type 0 2323 2242 396 256 0 0 chr18 3402469 3402547 -83275001 + Tigger5 DNA MER2_type 2243 2320 -3 * 364 197 15 0 chr18 3402547 3402612 -83274936 - Tigger5 DNA MER2_type -2245 78 13 1536 165 6 72 chr18 3402826 3403160 -83274388 + AluJo SINE Alu 1 312 0 1836 134 29 0 chr18 3403271 3403570 -83273978 + AluSx SINE Alu 1 307 0 263 226 94 38 chr18 3403594 3403700 -83273848 - L1ME4a LINE L1 -3 6118 6007 252 296 0 0 chr18 3403759 3403813 -83273735 + MIR SINE MIR 93 146 -62 230 294 0 24 chr18 3404276 3404361 -83273187 + LTR67 LTR ERVL 460 542 -15 1046 234 145 49 chr18 3404756 3404780 -83272768 + L1ME3A LINE L1 5717 5737 -433 2125 133 85 39 chr18 3404780 3405193 -83272355 + MSTB1 LTR MaLR 1 432 0 1046 234 145 49 chr18 3405193 3405464 -83272084 + L1ME3A LINE L1 5737 6064 -106 2142 133 0 0 chr18 3405464 3405764 -83271784 - AluSq SINE Alu -13 300 1 1046 234 145 49 chr18 3405764 3405873 -83271675 + L1ME3A LINE L1 6064 6161 -9 1651 155 99 0 chr18 3405884 3406168 -83271380 + AluSx SINE Alu 1 312 0 1521 173 71 16 chr18 3406180 3406503 -83271045 + L1MB2 LINE L1 5768 6108 -63 216 0 0 0 chr18 3406504 3406528 -83271020 + (T)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr18 3406545 3406568 -83270980 + GC_rich Low_complexity Low_complexity 1 23 0 2281 98 13 13 chr18 3406704 3407010 -83270538 - AluY SINE Alu -5 306 1 414 76 45 0 chr18 3407011 3407077 -83270471 + L1MB2 LINE L1 6103 6171 0 843 181 0 0 chr18 3407409 3407536 -83270012 - FLAM_A SINE Alu -5 137 11 1982 114 24 3 chr18 3408500 3408790 -83268758 + AluSg SINE Alu 6 301 -9 338 254 201 32 chr18 3408863 3409272 -83268276 + L1ME LINE L1 5363 5816 -305 1795 175 0 16 chr18 3409592 3409907 -83267641 - AluJo SINE Alu -2 310 1 519 268 64 28 chr18 3410376 3410712 -83266836 - L1MEd LINE L1 -4538 1522 868 245 324 56 96 chr18 3410898 3411275 -83266273 - L1MEd LINE L1 -5488 631 270 192 313 31 83 chr18 3411470 3411527 -83266021 + L2 LINE L2 3173 3225 -47 478 268 62 62 chr18 3411527 3411736 -83265812 - MER63A DNA MER1_type -1 209 1 192 313 31 83 chr18 3411736 3411774 -83265774 + L2 LINE L2 3225 3263 -9 2228 111 3 3 chr18 3412099 3412406 -83265142 - AluSx SINE Alu -3 309 3 245 258 16 32 chr18 3412457 3412519 -83265029 + MIR SINE MIR 55 115 -93 850 186 41 41 chr18 3412524 3412696 -83264852 - FAM SINE Alu -3 172 1 611 122 17 52 chr18 3413311 3413426 -83264122 - HY1 scRNA scRNA -1 111 1 * 1574 138 155 77 chr18 3413424 3413838 -83263710 + MLT1B LTR MaLR 22 467 0 902 188 24 0 chr18 3415302 3415467 -83262081 + FAM SINE Alu 4 172 -3 1329 184 78 24 chr18 3415858 3416151 -83261397 + AluJo SINE Alu 1 309 -3 930 100 29 0 chr18 3417156 3417296 -83260252 + AluJb SINE Alu 169 312 0 510 148 0 0 chr18 3417404 3417485 -83260063 - U13 snRNA snRNA -1 103 23 1495 189 10 7 chr18 3417656 3417958 -83259590 + AluJb SINE Alu 1 303 -9 2207 108 0 3 chr18 3418429 3418725 -83258823 - AluSx SINE Alu -15 297 3 401 331 89 6 chr18 3419300 3419469 -83258079 + MIR SINE MIR 25 207 -55 429 227 0 11 chr18 3419477 3419565 -83257983 + MIR SINE MIR 25 111 -151 702 194 58 0 chr18 3419571 3419710 -83257838 + AluJb SINE Alu 136 282 -30 2100 114 16 3 chr18 3421445 3421751 -83255797 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr18 3422396 3422417 -83255131 + AT_rich Low_complexity Low_complexity 1 21 0 228 161 25 34 chr18 3423651 3423769 -83253779 + (CTATA)n Simple_repeat Simple_repeat 2 118 0 517 273 75 50 chr18 3423885 3424226 -83253322 - L1ME LINE L1 -552 5614 5271 1808 137 71 39 chr18 3424283 3424478 -83253070 + MER7A DNA MER2_type 1 211 -2827 2140 120 3 3 chr18 3424478 3424787 -83252761 + AluSx SINE Alu 2 310 -2 1808 137 71 39 chr18 3424787 3424928 -83252620 + MER7A DNA MER2_type 211 346 0 1828 171 10 3 chr18 3425095 3425387 -83252161 - AluJb SINE Alu -17 295 2 287 264 100 27 chr18 3425766 3425876 -83251672 - MER5A DNA MER1_type 0 189 72 * 327 235 71 20 chr18 3425791 3425889 -83251659 + MER5A DNA MER1_type 37 139 -50 2222 91 0 0 chr18 3426073 3426369 -83251179 + AluY SINE Alu 1 296 -15 497 266 69 69 chr18 3426625 3426900 -83250648 - MER102b DNA MER1_type -47 294 20 404 249 145 65 chr18 3427315 3427520 -83250028 + L1ME LINE L1 5455 5696 -425 1514 155 132 3 chr18 3427520 3427823 -83249725 + MER2 DNA MER2_type 2 343 -1 404 249 145 65 chr18 3427823 3427933 -83249615 + L1ME LINE L1 5696 5796 -325 1502 152 50 37 chr18 3429578 3429875 -83247673 + AluJo SINE Alu 1 301 -11 2125 111 0 3 chr18 3430536 3430833 -83246715 - AluSx SINE Alu -16 296 1 2189 150 0 3 chr18 3430950 3431296 -83246252 - L1PA16 LINE L1 -18 6148 5804 314 295 86 14 chr18 3432337 3432454 -83245094 + MIR SINE MIR 11 130 -93 2198 121 0 0 chr18 3432498 3432803 -83244745 + AluSx SINE Alu 1 305 -7 261 219 62 10 chr18 3433360 3433456 -83244092 + L1ME3 LINE L1 968 1068 -5051 227 131 82 33 chr18 3433489 3433550 -83243998 + L1ME3 LINE L1 1230 1293 -4836 497 246 144 16 chr18 3433639 3433826 -83243722 + L1ME3 LINE L1 1461 1671 -4639 210 37 0 0 chr18 3434298 3434325 -83243223 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 627 230 230 38 chr18 3434378 3434770 -83242778 + L1ME3 LINE L1 2302 2768 -3361 254 224 209 72 chr18 3434787 3434862 -83242686 + L1ME3 LINE L1 2851 2914 -3215 1576 199 7 13 chr18 3434862 3435163 -83242385 + AluJo SINE Alu 5 303 -9 254 224 209 72 chr18 3435163 3435556 -83241992 + L1ME3 LINE L1 2914 3383 -2746 22 56 0 0 chr18 3435567 3435603 -83241945 + AT_rich Low_complexity Low_complexity 1 36 0 1086 108 7 0 chr18 3435619 3435767 -83241781 + AluSg/x SINE Alu 144 292 -20 1172 243 89 81 chr18 3435781 3436504 -83241044 + L1ME3 LINE L1 3398 4114 -2015 2399 94 0 0 chr18 3436504 3436813 -83240735 + AluY SINE Alu 1 309 -2 1172 243 89 81 chr18 3436813 3436911 -83240637 + L1ME3 LINE L1 4114 4210 -1919 619 167 92 17 chr18 3436911 3437031 -83240517 + FLAM_C SINE Alu 2 130 -3 1289 225 64 0 chr18 3437035 3437302 -83240246 + AluJb SINE Alu 3 286 -16 1172 243 89 81 chr18 3437302 3437444 -83240104 + L1ME3 LINE L1 4212 4374 -1755 495 111 0 0 chr18 3437445 3437517 -83240031 - AluS SINE Alu -241 72 1 2615 206 39 18 chr18 3437567 3438110 -83239438 + MER68 LTR ERV1 9 562 0 798 260 220 24 chr18 3438112 3438514 -83239034 + L1ME3 LINE L1 5030 5352 -793 1242 207 57 4 chr18 3438514 3438643 -83238905 + AluJb SINE Alu 1 122 -180 180 0 0 0 chr18 3438643 3438663 -83238885 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1242 207 57 4 chr18 3438663 3438813 -83238735 + AluJb SINE Alu 122 295 -7 798 260 220 24 chr18 3438813 3439164 -83238384 + L1ME3 LINE L1 5352 5934 -211 195 321 0 0 chr18 3439437 3439493 -83238055 - MIR SINE MIR -68 140 85 1038 194 116 10 chr18 3440307 3440600 -83236948 + MER33 DNA MER1_type 1 324 0 21 0 0 0 chr18 3443528 3443549 -83233999 + AT_rich Low_complexity Low_complexity 1 21 0 2187 105 0 7 chr18 3443676 3443980 -83233568 + AluSx SINE Alu 1 302 -10 369 0 0 0 chr18 3443987 3444028 -83233520 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr18 3444562 3444583 -83232965 + AT_rich Low_complexity Low_complexity 1 21 0 889 176 100 0 chr18 3445069 3445239 -83232309 + MER2 DNA MER2_type 1 187 -158 754 201 0 7 chr18 3446187 3446331 -83231217 - FLAM_C SINE Alu 0 143 1 709 197 0 0 chr18 3447052 3447179 -83230369 + AluJb SINE Alu 1 127 -185 1833 120 7 28 chr18 3447228 3447511 -83230037 + AluSq SINE Alu 1 277 -36 226 0 29 29 chr18 3447514 3447549 -83229999 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1095 108 61 158 chr18 3447617 3447914 -83229634 + L1MA8 LINE L1 6017 6284 -7 449 279 30 41 chr18 3447998 3448195 -83229353 + L1MC5 LINE L1 7714 7908 -53 380 315 234 10 chr18 3448893 3449188 -83228360 + L2 LINE L2 2920 3280 -33 1624 179 10 17 chr18 3449397 3449687 -83227861 + AluJo SINE Alu 1 288 -24 623 213 178 93 chr18 3450251 3450594 -83226954 - L2 LINE L2 -1350 1964 1593 352 167 0 0 chr18 3451257 3451317 -83226231 + L1MC5 LINE L1 7720 7779 -182 3313 46 2 2 chr18 3452020 3452437 -83225111 + L1PA7 LINE L1 5738 6154 0 583 246 8 0 chr18 3452444 3452566 -83224982 - FLAM_A SINE Alu -10 123 1 219 315 43 0 chr18 3453304 3453396 -83224152 - L2 LINE L2 -2503 811 716 1643 164 49 0 chr18 3454645 3454932 -83222616 - AluJo SINE Alu -11 301 1 6488 188 47 14 chr18 3454977 3457287 -83220261 - L1PA16 LINE L1 -3 6163 3784 2100 99 3 10 chr18 3457291 3457583 -83219965 - AluSg1 SINE Alu -19 290 1 2064 130 3 0 chr18 3460346 3460639 -83216909 - AluSx SINE Alu -16 296 3 2418 88 0 0 chr18 3461901 3462209 -83215339 + AluY SINE Alu 1 308 -3 1372 226 3 28 chr18 3462357 3462675 -83214873 + AluJo SINE Alu 1 310 -2 339 42 22 0 chr18 3463423 3463476 -83214072 - MER41A LTR ERV1 -110 444 391 732 279 45 37 chr18 3464564 3464808 -83212740 - MIR SINE MIR -11 251 6 466 146 73 31 chr18 3465246 3465342 -83212206 - MIR SINE MIR -58 204 105 26 50 0 0 chr18 3465805 3465845 -83211703 + AT_rich Low_complexity Low_complexity 1 40 0 534 224 148 38 chr18 3466308 3466545 -83211003 + L1MD3 LINE L1 7732 7994 -1 28 0 0 0 chr18 3467572 3467600 -83209948 + AT_rich Low_complexity Low_complexity 1 28 0 1821 265 150 37 chr18 3468255 3469389 -83208159 + HAL1 LINE L1 12 1273 -1234 22 56 0 0 chr18 3469575 3469611 -83207937 + AT_rich Low_complexity Low_complexity 1 36 0 880 167 130 0 chr18 3470032 3470194 -83207354 - AluJo SINE Alu -129 183 1 963 192 58 0 chr18 3470359 3470531 -83207017 + MER5A DNA MER1_type 6 187 -2 308 226 71 65 chr18 3470747 3470915 -83206633 + L1MC/D LINE L1 5629 5797 -2011 677 288 107 25 chr18 3471084 3471438 -83206110 + HAL1 LINE L1 122 504 -2003 755 161 0 0 chr18 3471454 3471572 -83205976 + FLAM_C SINE Alu 1 118 -15 665 264 9 69 chr18 3471626 3471842 -83205706 + HAL1 LINE L1 527 729 -1778 527 226 85 59 chr18 3471903 3472243 -83205305 + HAL1 LINE L1 908 1256 -1251 769 145 0 72 chr18 3472243 3472395 -83205153 + AluJo SINE Alu 1 141 -171 2201 104 3 0 chr18 3472395 3472692 -83204856 + AluSp SINE Alu 1 298 -15 422 184 0 0 chr18 3472697 3472773 -83204775 + AluJ/FRAM SINE Alu 221 296 -16 1939 126 3 27 chr18 3472773 3473074 -83204474 + AluSg SINE Alu 1 294 -16 270 169 65 0 chr18 3473074 3473151 -83204397 + GA-rich Low_complexity Low_complexity 2 83 0 476 263 77 58 chr18 3473152 3473479 -83204069 + HAL1 LINE L1 1242 1574 -933 2116 134 10 0 chr18 3473517 3473822 -83203726 + AluSx SINE Alu 1 308 -4 29 47 0 0 chr18 3474529 3474572 -83202976 + AT_rich Low_complexity Low_complexity 1 43 0 3864 260 59 57 chr18 3474664 3474755 -83202793 + L1PA15-16 LINE L1 41 130 -6719 1209 197 126 7 chr18 3474755 3475024 -83202524 + AluJo SINE Alu 1 301 -1 3864 260 59 57 chr18 3475024 3476507 -83201041 + L1PA15-16 LINE L1 130 1608 -5241 1230 197 70 35 chr18 3476507 3476791 -83200757 - AluJo SINE Alu -18 294 1 3864 260 59 57 chr18 3476791 3478670 -83198878 + L1PA15-16 LINE L1 1608 3627 -3222 1491 112 0 5 chr18 3478682 3478879 -83198669 - AluSc SINE Alu -26 283 88 227 303 202 0 chr18 3479083 3479192 -83198356 - L2 LINE L2 0 3313 3183 368 248 41 16 chr18 3479210 3479331 -83198217 + MER58B DNA MER1_type 218 341 0 311 336 133 54 chr18 3479391 3479706 -83197842 - L2 LINE L2 -406 2908 2569 1338 191 17 0 chr18 3479718 3479953 -83197595 + MER8 DNA MER2_type 1 239 0 901 151 25 86 chr18 3479994 3480239 -83197309 + L1MB3 LINE L1 3560 3789 -2357 1909 146 146 0 chr18 3480239 3480574 -83196974 - MSTB1 LTR MaLR -3 429 46 2713 16 0 3 chr18 3480586 3480893 -83196655 + AluYa5 SINE Alu 1 306 -5 260 248 0 0 chr18 3480903 3480971 -83196577 + L1MB3 LINE L1 3784 3851 -2295 755 165 15 15 chr18 3480971 3481104 -83196444 + AluJo SINE Alu 1 133 -169 975 174 22 22 chr18 3481215 3481399 -83196149 + AluJo SINE Alu 120 303 -9 1725 201 65 18 chr18 3481400 3481847 -83195701 + L1MB3 LINE L1 3842 4309 -1837 * 3066 180 86 75 chr18 3481843 3483111 -83194437 + L1MB3 LINE L1 4515 5837 -346 240 133 0 0 chr18 3483111 3483156 -83194392 + LTR66 LTR ERVL 394 438 -172 3066 180 86 75 chr18 3483156 3483437 -83194111 + L1MB3 LINE L1 5837 6113 -70 513 0 0 0 chr18 3483462 3483519 -83194029 + (TA)n Simple_repeat Simple_repeat 1 57 0 1466 114 0 53 chr18 3483541 3483768 -83193780 + AluSq SINE Alu 81 295 -18 1155 122 0 12 chr18 3483840 3484004 -83193544 - FRAM SINE Alu -15 161 1 502 244 106 8 chr18 3484006 3484129 -83193419 + MLT1D LTR MaLR 297 431 -74 25 51 0 0 chr18 3484401 3484440 -83193108 + AT_rich Low_complexity Low_complexity 1 39 0 1817 126 71 44 chr18 3485228 3485593 -83191955 + THE1C LTR MaLR 1 375 0 21 36 0 0 chr18 3486693 3486721 -83190827 + AT_rich Low_complexity Low_complexity 1 28 0 844 263 85 14 chr18 3487338 3487619 -83189929 + L2 LINE L2 1943 2243 -1071 25 0 0 0 chr18 3488446 3488471 -83189077 + AT_rich Low_complexity Low_complexity 1 25 0 564 250 19 32 chr18 3489091 3489247 -83188301 + MER106B DNA MER1_type 906 1059 0 254 240 27 27 chr18 3489998 3490073 -83187475 + L1MC4 LINE L1 7958 8032 -10 697 204 0 29 chr18 3490086 3490223 -83187325 - FLAM_A SINE Alu 0 133 1 2198 115 3 3 chr18 3490936 3491240 -83186308 + AluSx SINE Alu 1 304 -8 1694 188 3 7 chr18 3492756 3493065 -83184483 + AluSx SINE Alu 1 308 -4 503 223 169 27 chr18 3493104 3493288 -83184260 - MIR SINE MIR -20 242 33 234 229 42 21 chr18 3493346 3493442 -83184106 + L1 LINE L1 4570 4667 -1479 231 176 44 73 chr18 3493632 3493700 -83183848 + L1 LINE L1 4903 4968 -1178 757 183 0 21 chr18 3493726 3493868 -83183680 + FLAM_C SINE Alu 1 139 -4 451 289 64 39 chr18 3495448 3495652 -83181896 - MIR SINE MIR -26 236 28 182 328 62 0 chr18 3495720 3495784 -83181764 + L3 LINE CR1 1475 1542 -35 1727 156 49 18 chr18 3495811 3496138 -83181410 - MER1B DNA MER1_type 0 337 1 2386 90 0 0 chr18 3496784 3497084 -83180464 + AluSq SINE Alu 1 300 -13 357 234 19 61 chr18 3497245 3497403 -83180145 - L2 LINE L2 0 3313 3106 207 308 15 15 chr18 3497474 3497539 -83180009 + L2 LINE L2 3208 3272 0 1966 102 4 0 chr18 3498466 3498732 -83178816 + AluSq SINE Alu 1 267 -46 284 0 28 0 chr18 3498743 3498779 -83178769 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1607 163 111 7 chr18 3498818 3499124 -83178424 + MER7A DNA MER2_type 1 336 -10 253 61 0 0 chr18 3499259 3499292 -83178256 + U7 snRNA snRNA 1 33 -30 182 329 50 43 chr18 3499463 3499624 -83177924 - L2 LINE L2 -4 3309 3148 801 136 8 0 chr18 3500005 3500130 -83177418 - FLAM_C SINE Alu -7 126 1 480 258 62 68 chr18 3501505 3501614 -83175934 + L1ME4a LINE L1 5511 5619 -502 2087 112 0 40 chr18 3501614 3501917 -83175631 + AluSx SINE Alu 1 291 -21 480 258 62 68 chr18 3501917 3502160 -83175388 + L1ME4a LINE L1 5619 5861 -260 1604 153 44 34 chr18 3502367 3502661 -83174887 - AluJo SINE Alu -15 297 1 616 230 0 8 chr18 3502687 3502813 -83174735 + FRAM SINE Alu 21 145 -31 2282 103 0 10 chr18 3502874 3503184 -83174364 + AluSx SINE Alu 1 307 -5 239 191 71 36 chr18 3503189 3503273 -83174275 - L1MC4 LINE L1 -17 8025 7939 515 209 57 0 chr18 3504154 3504259 -83173289 + MER5A DNA MER1_type 1 111 -78 344 314 31 0 chr18 3504561 3504752 -83172796 + L1MEd LINE L1 1246 1442 -4974 308 290 30 10 chr18 3504766 3504866 -83172682 + L1MEd LINE L1 1509 1610 -4997 446 282 37 40 chr18 3505831 3505968 -83171580 + L1MEd LINE L1 1463 1599 -5008 1270 177 9 9 chr18 3505968 3506200 -83171348 - MER46A DNA MER2_type -4 232 1 446 282 37 40 chr18 3506200 3506442 -83171106 + L1MEd LINE L1 1599 2028 -4579 2180 189 29 35 chr18 3506448 3506960 -83170588 + L1MB4 LINE L1 5666 6174 -6 2523 55 3 0 chr18 3506997 3507305 -83170243 + AluY SINE Alu 1 309 -2 1512 240 100 7 chr18 3507411 3507666 -83169882 + L1MEd LINE L1 2064 2294 -4313 405 0 0 0 chr18 3507666 3507711 -83169837 + (CA)n Simple_repeat Simple_repeat 1 45 0 1512 240 100 7 chr18 3507711 3508014 -83169534 + L1MEd LINE L1 2294 2674 -3933 333 354 31 19 chr18 3508160 3508321 -83169227 - L1MEc LINE L1 -4645 1751 1589 266 178 0 0 chr18 3508339 3508384 -83169164 + Tigger4(Zombi) DNA MER2_type 1 45 -2686 707 248 56 11 chr18 3508394 3508680 -83168868 + L1MEd LINE L1 2418 2716 -3710 1032 252 74 14 chr18 3508696 3509116 -83168432 + L1MEd LINE L1 2817 3261 -3165 1999 134 19 7 chr18 3509790 3510097 -83167451 + AluSx SINE Alu 1 311 -1 277 214 0 142 chr18 3510767 3510806 -83166742 + L1ME1 LINE L1 6015 6058 -108 1723 154 9 63 chr18 3510806 3510975 -83166573 - AluJo SINE Alu -10 302 156 2271 115 0 0 chr18 3510975 3511280 -83166268 - AluSx SINE Alu -5 307 3 1723 154 9 63 chr18 3511280 3511429 -83166119 - AluJo SINE Alu -156 156 1 277 214 0 142 chr18 3511429 3511519 -83166029 + L1ME1 LINE L1 6058 6128 -38 4130 232 93 20 chr18 3511578 3512917 -83164631 + L1M4 LINE L1 195 1619 -4765 1706 102 4 16 chr18 3512918 3513164 -83164384 - AluY SINE Alu -10 301 59 2255 111 3 0 chr18 3513277 3513583 -83163965 + AluSg SINE Alu 1 307 -3 415 244 64 82 chr18 3513772 3513978 -83163570 + L1M4 LINE L1 1662 1834 -4550 2116 106 0 57 chr18 3513981 3514399 -83163149 + AluSx SINE Alu 1 399 0 343 285 41 62 chr18 3514426 3514668 -83162880 + L1M4 LINE L1 1969 2205 -4179 1748 160 33 0 chr18 3514681 3514976 -83162572 + AluJo SINE Alu 1 304 0 667 212 162 0 chr18 3514981 3515160 -83162388 + L1MB7 LINE L1 5961 6168 -16 689 265 223 26 chr18 3515487 3515944 -83161604 + L1MC4 LINE L1 7496 8042 0 605 284 43 89 chr18 3516013 3516428 -83161120 + L2 LINE L2 2839 3234 -79 2305 100 0 0 chr18 3517037 3517337 -83160211 + AluSg SINE Alu 1 300 -10 953 241 61 13 chr18 3517382 3517610 -83159938 - MIR SINE MIR -4 258 20 975 271 143 20 chr18 3518671 3519110 -83158438 + L1ME4a LINE L1 5514 6006 -115 213 333 141 0 chr18 3519525 3519603 -83157945 - L2 LINE L2 -57 3215 3127 2204 93 3 3 chr18 3520084 3520373 -83157175 + AluSq SINE Alu 14 302 -11 2422 74 0 10 chr18 3520701 3521013 -83156535 + AluY SINE Alu 1 309 -2 264 120 0 41 chr18 3521343 3521400 -83156148 + AluJo SINE Alu 1 35 -267 1375 272 132 62 chr18 3521403 3522545 -83155003 - L2 LINE L2 -6 3307 2038 1193 192 0 69 chr18 3522547 3522654 -83154894 + AluJo SINE Alu 21 134 -178 1490 211 13 19 chr18 3522654 3522962 -83154586 - AluJo SINE Alu -6 306 1 1193 192 0 69 chr18 3522962 3523099 -83154449 + AluJo SINE Alu 134 248 -64 913 239 126 45 chr18 3523102 3523458 -83154090 - L2 LINE L2 -1262 2052 1668 410 302 72 72 chr18 3523484 3523706 -83153842 + MIR SINE MIR 8 229 -33 2355 105 0 0 chr18 3523846 3524151 -83153397 + AluSx SINE Alu 1 305 -7 21 71 0 0 chr18 3525909 3525951 -83151597 + AT_rich Low_complexity Low_complexity 1 42 0 2273 108 0 0 chr18 3526407 3526702 -83150846 + AluSg SINE Alu 1 295 -15 879 249 47 99 chr18 3527046 3527806 -83149742 + L1MC5 LINE L1 6956 7676 -285 2425 55 0 3 chr18 3528011 3528304 -83149244 + AluY SINE Alu 1 292 -19 331 261 96 84 chr18 3528312 3528614 -83148934 + L1ME LINE L1 4795 5103 -1043 1694 165 0 37 chr18 3528614 3528911 -83148637 + AluJb SINE Alu 1 286 -26 331 261 96 84 chr18 3528911 3528941 -83148607 + L1ME LINE L1 5103 5131 -1015 327 304 133 17 chr18 3528950 3529190 -83148358 + L1ME LINE L1 5381 5648 -514 2082 111 3 40 chr18 3529339 3529663 -83147885 - AluSx SINE Alu 0 312 1 2843 19 0 6 chr18 3529796 3530151 -83147397 - AluYb8 SINE Alu 0 353 1 3755 77 15 0 chr18 3530677 3531143 -83146405 - L1PA8 LINE L1 -3 6169 5697 2226 93 0 14 chr18 3531252 3531542 -83146006 + AluSx SINE Alu 5 290 -22 369 233 0 0 chr18 3531705 3531795 -83145753 + (TA)n Simple_repeat Simple_repeat 2 91 0 240 133 0 0 chr18 3531798 3531843 -83145705 - LTR66 LTR ERVL -172 438 394 237 369 57 33 chr18 3531862 3531984 -83145564 + MIR SINE MIR 25 149 -113 299 293 79 30 chr18 3532414 3532578 -83144970 + L1ME4a LINE L1 5528 5699 -422 1189 130 28 47 chr18 3532584 3532799 -83144749 + AluJo SINE Alu 3 213 -99 338 243 173 54 chr18 3532812 3532997 -83144551 + L1ME4a LINE L1 5692 5898 -223 372 246 42 17 chr18 3533317 3533435 -83144113 - L2 LINE L2 -1 3312 3192 33 56 0 0 chr18 3535012 3535066 -83142482 + GC_rich Low_complexity Low_complexity 1 54 0 343 140 0 0 chr18 3536896 3536946 -83140602 - MLT1F LTR MaLR 0 542 493 1314 154 199 20 chr18 3537114 3537406 -83140142 + MER2 DNA MER2_type 1 344 0 849 127 8 8 chr18 3538045 3538163 -83139385 - FLAM_C SINE Alu -15 118 1 2437 83 7 0 chr18 3538730 3539031 -83138517 + AluSp SINE Alu 1 303 -10 1759 185 7 3 chr18 3539170 3539468 -83138080 - AluJo SINE Alu -13 299 1 23 0 0 0 chr18 3539882 3539905 -83137643 + AT_rich Low_complexity Low_complexity 1 23 0 478 245 137 55 chr18 3539905 3540232 -83137316 - MLT1F LTR MaLR -39 503 174 2110 142 3 0 chr18 3540232 3540541 -83137007 - AluSx SINE Alu -2 310 1 478 245 137 55 chr18 3540541 3540595 -83136953 - MLT1F LTR MaLR -368 174 126 787 115 0 0 chr18 3540801 3540905 -83136643 + U6 snRNA snRNA 1 104 -3 2223 96 45 0 chr18 3540942 3541233 -83136315 + AluSc SINE Alu 1 304 -5 23 0 0 0 chr18 3541331 3541354 -83136194 + AT_rich Low_complexity Low_complexity 1 23 0 1756 190 0 0 chr18 3541491 3541796 -83135752 - AluJb SINE Alu -5 307 3 2226 111 3 0 chr18 3542101 3542398 -83135150 + AluSx SINE Alu 1 298 -14 1949 97 4 0 chr18 3542478 3542737 -83134811 + AluSx SINE Alu 44 303 -9 656 236 124 101 chr18 3543143 3543609 -83133939 - L1ME3 LINE L1 -291 5871 5395 1772 160 21 3 chr18 3543609 3543896 -83133652 + AluSx SINE Alu 1 292 -20 375 310 69 16 chr18 3543920 3544165 -83133383 - L1ME3 LINE L1 -1156 4990 4733 1187 268 109 49 chr18 3545096 3545845 -83131703 - L2 LINE L2 -83 3230 2442 294 244 39 0 chr18 3545859 3545937 -83131611 + LTR67 LTR ERVL 1 81 -476 635 272 125 36 chr18 3546054 3546333 -83131215 + LTR67 LTR ERVL 254 557 0 2233 112 3 0 chr18 3546479 3546782 -83130766 + AluSx SINE Alu 1 304 -8 2311 99 3 0 chr18 3547671 3547964 -83129584 + AluSg SINE Alu 1 294 -16 237 315 22 0 chr18 3547964 3548053 -83129495 - L2 LINE L2 -829 2485 2395 780 118 0 37 chr18 3548174 3548309 -83129239 + L1MA8 LINE L1 6158 6287 -4 1851 156 30 10 chr18 3548584 3548886 -83128662 + AluJb SINE Alu 1 308 -4 1818 156 0 32 chr18 3549753 3550061 -83127487 - AluJb SINE Alu -14 298 1 507 289 37 43 chr18 3550124 3550311 -83127237 - MER5A DNA MER1_type -3 186 1 2398 153 54 9 chr18 3550357 3550781 -83126767 + L1MC1 LINE L1 5882 6324 -9 2514 35 3 0 chr18 3550792 3551082 -83126466 - AluY SINE Alu -18 293 3 2274 100 3 0 chr18 3551356 3551656 -83125892 + AluSx SINE Alu 3 303 -9 213 39 0 0 chr18 3552066 3552092 -83125456 + (A)n Simple_repeat Simple_repeat 1 26 0 345 24 0 0 chr18 3552119 3552161 -83125387 + (CA)n Simple_repeat Simple_repeat 2 43 0 2265 98 10 0 chr18 3552904 3553201 -83124347 + AluSx SINE Alu 1 300 -12 2929 65 3 6 chr18 3554861 3555217 -83122331 - THE1A LTR MaLR 0 355 1 12721 88 2 14 chr18 3555217 3556816 -83120732 - THE1A-int LTR MaLR 0 1580 1 3038 56 3 3 chr18 3556816 3557171 -83120377 - THE1A LTR MaLR 0 355 1 308 234 105 121 chr18 3557322 3557446 -83120102 + MIR SINE MIR 2 123 -139 368 276 128 41 chr18 3557552 3557871 -83119677 + L1M4 LINE L1 2677 3023 -3123 1907 121 0 124 chr18 3558022 3558219 -83119329 - AluJo SINE Alu -6 296 76 198 0 0 0 chr18 3558219 3558241 -83119307 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2213 75 0 0 chr18 3558241 3558506 -83119042 - AluSc SINE Alu -28 281 17 1907 121 0 124 chr18 3558506 3558645 -83118903 - AluJo SINE Alu -224 78 1 1175 317 42 32 chr18 3558661 3559350 -83118198 - ERVL LTR ERVL -548 4530 3807 1730 279 62 68 chr18 3559662 3560244 -83117304 - ERVL LTR ERVL -1912 3084 2500 1885 170 0 7 chr18 3560244 3560538 -83117010 + AluJb SINE Alu 1 292 -20 1730 279 62 68 chr18 3560538 3561127 -83116421 - ERVL LTR ERVL -2496 2500 1916 4374 105 89 58 chr18 3561149 3561538 -83116010 - Tigger3(Golem) DNA MER2_type 0 3028 2652 188 35 35 0 chr18 3561538 3561567 -83115981 + (TGAG)n Simple_repeat Simple_repeat 2 31 0 4374 105 89 58 chr18 3561567 3562033 -83115515 - Tigger3(Golem) DNA MER2_type -376 2652 2147 2568 111 11 0 chr18 3562054 3562431 -83115117 - L1PA16 LINE L1 -9 6157 5777 2117 118 3 20 chr18 3562431 3562736 -83114812 - AluSc SINE Alu -9 300 1 242 61 0 0 chr18 3563143 3563176 -83114372 - U7 snRNA snRNA -30 33 1 1407 176 111 7 chr18 3563310 3563616 -83113932 - MER7A DNA MER2_type -10 336 1 210 37 0 0 chr18 3563662 3563689 -83113859 + (TG)n Simple_repeat Simple_repeat 2 28 0 1672 129 32 7 chr18 3563689 3563969 -83113579 - AluSx SINE Alu -25 287 1 211 273 20 91 chr18 3564837 3564936 -83112612 + MER5A DNA MER1_type 14 105 -84 252 0 0 0 chr18 3615014 3615042 -83062506 + (A)n Simple_repeat Simple_repeat 1 28 0 1482 158 114 11 chr18 3617316 3617588 -83059960 + AluJo SINE Alu 1 300 -2 611 184 176 0 chr18 3617591 3617727 -83059821 + AluJo/FRAM SINE Alu 137 296 -6 297 250 202 10 chr18 3619004 3619108 -83058440 + MIR SINE MIR 20 143 -119 208 231 19 0 chr18 3620294 3620346 -83057202 + GA-rich Low_complexity Low_complexity 4 56 0 202 130 65 0 chr18 3621037 3621083 -83056465 + (CAGA)n Simple_repeat Simple_repeat 2 50 0 1983 152 0 13 chr18 3621216 3621526 -83056022 + AluSx SINE Alu 1 306 -6 464 233 183 58 chr18 3624202 3624579 -83052969 + MLT1J2 LTR MaLR 21 448 -2 408 279 29 7 chr18 3626407 3626574 -83050974 + L1MC4a LINE L1 7175 7313 -495 940 226 143 0 chr18 3626655 3626934 -83050614 + MER33 DNA MER1_type 1 319 -5 350 293 170 42 chr18 3627108 3627391 -83050157 + L1MC4 LINE L1 7604 7922 -120 600 189 0 9 chr18 3628040 3628146 -83049402 - AluJb SINE Alu -13 299 195 1812 178 7 0 chr18 3628167 3628471 -83049077 - AluJb SINE Alu -6 306 1 2351 94 0 7 chr18 3628853 3629162 -83048386 + AluSq SINE Alu 1 307 -6 2329 104 7 0 chr18 3629337 3629644 -83047904 - AluSx SINE Alu -3 309 1 2055 131 20 7 chr18 3630206 3630503 -83047045 + AluSx SINE Alu 1 301 -11 2138 94 10 20 chr18 3636961 3637259 -83040289 + AluSx SINE Alu 1 295 -17 2143 109 10 10 chr18 3640440 3640744 -83036804 + AluSx SINE Alu 1 304 -8 2639 55 3 0 chr18 3640889 3641199 -83036349 - AluY SINE Alu 0 311 1 275 250 48 24 chr18 3644459 3644543 -83033005 - MIR3 SINE MIR -24 184 99 2148 101 38 0 chr18 3645363 3645651 -83031897 - AluSx SINE Alu -13 299 1 1800 179 0 13 chr18 3646366 3646673 -83030875 + AluJo SINE Alu 2 304 -8 2264 101 10 0 chr18 3648690 3648988 -83028560 + AluSx SINE Alu 1 301 -11 446 253 92 35 chr18 3649310 3649484 -83028064 + L1MC4a LINE L1 5699 5882 -1926 27 0 0 0 chr18 3650379 3650406 -83027142 + AT_rich Low_complexity Low_complexity 1 27 0 30 27 0 0 chr18 3651385 3651422 -83026126 + AT_rich Low_complexity Low_complexity 1 37 0 487 229 42 3 chr18 3651470 3651616 -83025932 + Tigger6 DNA MER2_type 1 209 -874 2425 147 49 5 chr18 3651716 3652124 -83025424 - MSTB LTR MaLR 0 426 1 2251 88 11 0 chr18 3652166 3652486 -83025062 + AluSq SINE Alu 1 323 0 2223 202 88 43 chr18 3652499 3652844 -83024704 + L1MC4a LINE L1 6243 6571 -1237 234 0 0 0 chr18 3652844 3652870 -83024678 + (TG)n Simple_repeat Simple_repeat 2 27 0 2223 202 88 43 chr18 3652870 3653169 -83024379 + L1MC4a LINE L1 6571 6916 -892 513 277 79 26 chr18 3653352 3653619 -83023929 + MARNA DNA Mariner 299 579 -7 1355 170 8 4 chr18 3653786 3654021 -83023527 + MER46A DNA MER2_type 1 236 0 324 300 0 0 chr18 3654160 3654230 -83023318 + MLT1K LTR MaLR 285 354 -234 2237 92 33 3 chr18 3654393 3654696 -83022852 + AluSx SINE Alu 1 312 0 31 0 0 0 chr18 3654696 3654727 -83022821 + AT_rich Low_complexity Low_complexity 1 31 0 30 0 0 0 chr18 3654739 3654769 -83022779 + AT_rich Low_complexity Low_complexity 1 30 0 2524 70 0 0 chr18 3654878 3655178 -83022370 - AluY SINE Alu -11 300 1 2284 116 0 0 chr18 3655385 3655687 -83021861 - AluSx SINE Alu -8 304 3 551 103 0 23 chr18 3655699 3655786 -83021762 - AluSq/x SINE Alu -179 133 49 338 295 74 7 chr18 3656768 3656917 -83020631 - L2 LINE L2 -49 3264 3106 1586 140 36 46 chr18 3657465 3657644 -83019904 + MLT1C LTR MaLR 1 177 -290 2260 80 3 32 chr18 3657644 3657958 -83019590 + AluY SINE Alu 3 307 -4 1586 140 36 46 chr18 3657958 3658085 -83019463 + MLT1C LTR MaLR 177 304 -163 313 210 30 30 chr18 3658085 3658185 -83019363 + HAL1 LINE L1 1024 1123 -1384 676 196 7 14 chr18 3658186 3658324 -83019224 + AluJo SINE Alu 84 220 -92 618 131 0 0 chr18 3658388 3658487 -83019061 + (GGA)n Simple_repeat Simple_repeat 2 100 0 548 252 27 76 chr18 3658498 3658760 -83018788 + HAL1 LINE L1 1128 1376 -1131 247 320 25 6 chr18 3659242 3659341 -83018207 + GA-rich Low_complexity Low_complexity 1 165 0 1077 217 60 4 chr18 3659390 3659639 -83017909 + HAL1 LINE L1 1555 1817 -690 666 261 110 10 chr18 3659674 3659984 -83017564 + HAL1 LINE L1 1986 2326 -181 311 214 48 0 chr18 3661367 3661451 -83016097 - MIR SINE MIR -56 206 119 4271 163 76 61 chr18 3661763 3662818 -83014730 + MER11C LTR ERVK 1 1071 0 2261 121 0 6 chr18 3663403 3663716 -83013832 + AluSx SINE Alu 1 311 -1 1538 177 11 18 chr18 3663728 3664011 -83013537 + AluJo SINE Alu 1 281 -31 279 0 0 0 chr18 3664012 3664043 -83013505 + (CA)n Simple_repeat Simple_repeat 2 32 0 674 222 0 0 chr18 3664080 3664206 -83013342 + FLAM_C SINE Alu 2 127 -16 205 324 145 14 chr18 3664359 3664504 -83013044 + MIR SINE MIR 84 247 -15 1712 113 43 66 chr18 3664757 3664892 -83012656 + AluJb SINE Alu 1 138 -174 2210 91 0 7 chr18 3664892 3665189 -83012359 + AluY SINE Alu 1 295 -16 1712 113 43 66 chr18 3665189 3665355 -83012193 + AluJb SINE Alu 138 295 -17 2307 76 0 13 chr18 3665503 3665805 -83011743 - AluY SINE Alu -8 303 6 21 0 0 0 chr18 3665817 3665838 -83011710 + AT_rich Low_complexity Low_complexity 1 21 0 1937 141 3 3 chr18 3666499 3666789 -83010759 + AluJb SINE Alu 1 290 -22 186 43 0 0 chr18 3667030 3667053 -83010495 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 909 189 47 28 chr18 3667083 3667295 -83010253 - AluJo SINE Alu -34 278 63 726 137 8 24 chr18 3667326 3667450 -83010098 + FLAM_C SINE Alu 3 124 -9 2027 109 0 0 chr18 3667457 3667723 -83009825 + AluY SINE Alu 1 266 -45 2383 95 0 7 chr18 3667775 3668080 -83009468 - AluSx SINE Alu -9 303 1 238 330 41 10 chr18 3668940 3669037 -83008511 + L3b LINE CR1 1307 1406 -177 2099 103 3 7 chr18 3669743 3670035 -83007513 + AluSx SINE Alu 1 291 -21 2158 110 0 3 chr18 3671039 3671329 -83006219 - AluSc SINE Alu -20 289 1 877 272 43 67 chr18 3671496 3671912 -83005636 - MARNA DNA Mariner -103 483 78 319 160 0 160 chr18 3672461 3672539 -83005009 - Zaphod DNA AcHobo -2 4029 3971 765 124 143 100 chr18 3672539 3672749 -83004799 + MER20 DNA MER1_type 1 219 0 319 160 0 160 chr18 3672749 3672776 -83004772 - Zaphod DNA AcHobo -60 3971 3941 694 96 88 24 chr18 3672776 3672901 -83004647 + L1MA4 LINE L1 6164 6296 -4 227 289 0 19 chr18 3673161 3673213 -83004335 - Zaphod DNA AcHobo -3950 81 31 183 333 67 0 chr18 3673907 3674027 -83003521 - MIR3 SINE MIR -27 181 54 184 127 42 42 chr18 3674136 3674207 -83003341 + CT-rich Low_complexity Low_complexity 2 72 0 1556 172 32 38 chr18 3674211 3674391 -83003157 - AluJo SINE Alu 0 312 133 2326 55 38 10 chr18 3674391 3674683 -83002865 - AluY SINE Alu -11 300 1 1556 172 32 38 chr18 3674683 3674816 -83002732 - AluJo SINE Alu -179 133 1 2791 156 67 78 chr18 3674846 3675363 -83002185 - L1MB4 LINE L1 -42 6138 5617 2230 107 3 0 chr18 3675363 3675654 -83001894 - AluSg1 SINE Alu -17 292 1 2791 156 67 78 chr18 3675654 3675666 -83001882 - L1MB4 LINE L1 -563 5617 5606 1337 208 58 7 chr18 3675666 3675940 -83001608 - AluJb SINE Alu -24 288 1 2791 156 67 78 chr18 3675940 3676077 -83001471 - L1MB4 LINE L1 -574 5606 5478 3664 185 74 21 chr18 3676767 3677447 -83000101 - L1MB4 LINE L1 -710 5474 4713 2168 121 3 0 chr18 3677447 3677744 -82999804 - AluSx SINE Alu -14 298 1 3664 185 74 21 chr18 3677744 3678095 -82999453 - L1MB4 LINE L1 -1471 4713 4382 370 278 39 39 chr18 3678185 3678365 -82999183 + MIR SINE MIR 77 256 -6 222 37 0 0 chr18 3679344 3679371 -82998177 + (T)n Simple_repeat Simple_repeat 1 27 0 2286 110 0 0 chr18 3680140 3680431 -82997117 + AluSx SINE Alu 1 291 -21 1625 197 0 26 chr18 3680770 3681080 -82996468 + AluJo SINE Alu 1 302 -10 21 0 0 0 chr18 3681664 3681685 -82995863 + AT_rich Low_complexity Low_complexity 1 21 0 1908 168 0 3 chr18 3681946 3682249 -82995299 + AluJo SINE Alu 5 306 -6 269 240 168 8 chr18 3682892 3683017 -82994531 - MIR SINE MIR -48 214 70 2268 102 0 0 chr18 3683542 3683835 -82993713 + AluSg1 SINE Alu 1 293 -16 482 230 0 0 chr18 3685002 3685093 -82992455 + L1ME2 LINE L1 6065 6158 -6 216 0 0 0 chr18 3685093 3685117 -82992431 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 240 35 0 0 chr18 3685329 3685358 -82992190 + (TG)n Simple_repeat Simple_repeat 2 30 0 306 0 0 0 chr18 3686232 3686266 -82991282 + (T)n Simple_repeat Simple_repeat 1 34 0 49 52 0 0 chr18 3686266 3686343 -82991205 + GC_rich Low_complexity Low_complexity 1 77 0 989 198 4 62 chr18 3686653 3686926 -82990622 + AluSx SINE Alu 1 257 -55 1518 156 60 0 chr18 3686934 3687217 -82990331 + L1MA3 LINE L1 6006 6305 0 713 195 81 7 chr18 3687365 3687514 -82990034 - MER105 DNA DNA -44 160 1 303 294 124 20 chr18 3687557 3687710 -82989838 + HAL1 LINE L1 493 661 -1846 2316 252 100 44 chr18 3687744 3688818 -82988730 + HAL1 LINE L1 806 1939 -568 557 242 137 33 chr18 3689026 3689208 -82988340 + HAL1 LINE L1 2271 2471 -36 204 334 113 33 chr18 3689988 3690317 -82987231 + L2 LINE L2 2917 3271 -1 1770 175 3 3 chr18 3692084 3692375 -82985173 + AluJo SINE Alu 1 291 -21 186 133 0 0 chr18 3692375 3692405 -82985143 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 2334 94 7 0 chr18 3692769 3693076 -82984472 + AluSx SINE Alu 1 309 -3 255 122 0 0 chr18 3693076 3693117 -82984431 + L1M4 LINE L1 4628 4668 -1478 1903 153 14 10 chr18 3694694 3694989 -82982559 - AluJo SINE Alu -16 296 1 417 313 113 13 chr18 3695342 3695572 -82981976 + L2 LINE L2 2722 2974 -340 941 122 0 0 chr18 3695585 3695716 -82981832 - FLAM_C SINE Alu -10 133 3 1403 147 6 119 chr18 3695765 3696084 -82981464 + AluJb SINE Alu 3 285 -27 210 167 26 13 chr18 3696084 3696097 -82981451 + (TA)n Simple_repeat Simple_repeat 2 13 -67 2260 104 3 0 chr18 3696097 3696384 -82981164 + AluSq SINE Alu 1 288 -25 210 167 26 13 chr18 3696384 3696448 -82981100 + (TA)n Simple_repeat Simple_repeat 13 80 0 851 252 59 42 chr18 3696767 3697172 -82980376 + MLT1H1 LTR MaLR 139 549 0 233 250 167 37 chr18 3697580 3697688 -82979860 + L2 LINE L2 3141 3262 -10 24 32 0 0 chr18 3698097 3698128 -82979420 + GC_rich Low_complexity Low_complexity 1 31 0 348 64 0 0 chr18 3698147 3698194 -82979354 + (A)n Simple_repeat Simple_repeat 1 47 0 2065 102 0 27 chr18 3699883 3700178 -82977370 + AluSx SINE Alu 1 287 -25 369 0 0 0 chr18 3700178 3700219 -82977329 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr18 3702241 3702263 -82975285 + AT_rich Low_complexity Low_complexity 1 22 0 204 214 0 0 chr18 3702438 3702480 -82975068 + L2 LINE L2 3271 3312 -1 409 182 11 23 chr18 3702585 3702673 -82974875 - L1MD1 LINE L1 0 6242 6156 2397 95 0 3 chr18 3703993 3704298 -82973250 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr18 3704609 3704629 -82972919 + (A)n Simple_repeat Simple_repeat 1 20 0 547 265 97 68 chr18 3704946 3705046 -82972502 + L2 LINE L2 2956 3052 -261 225 0 0 0 chr18 3705046 3705071 -82972477 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 1996 94 22 4 chr18 3705073 3705348 -82972200 - AluY SINE Alu -31 280 1 547 265 97 68 chr18 3705348 3705390 -82972158 + L2 LINE L2 3052 3091 -222 1588 195 10 13 chr18 3705390 3705698 -82971850 - AluJo SINE Alu -5 307 1 547 265 97 68 chr18 3705698 3705891 -82971657 + L2 LINE L2 3091 3305 -8 1677 193 7 7 chr18 3705892 3706192 -82971356 - AluJb SINE Alu -12 300 1 2444 47 23 17 chr18 3706590 3706891 -82970657 - AluY SINE Alu -8 303 1 300 70 0 0 chr18 3706976 3707019 -82970529 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2163 110 7 0 chr18 3707725 3708015 -82969533 - AluSx SINE Alu -20 292 1 2411 55 7 0 chr18 3708051 3708343 -82969205 + AluY SINE Alu 1 294 -17 1793 154 0 34 chr18 3708345 3708637 -82968911 - AluJb SINE Alu -30 282 1 530 240 109 16 chr18 3708781 3708973 -82968575 - MIR SINE MIR -49 213 4 2405 78 3 0 chr18 3709321 3709616 -82967932 - AluSp SINE Alu -17 296 1 670 176 84 0 chr18 3710132 3710263 -82967285 + L1PA16 LINE L1 6025 6166 0 21 0 0 31 chr18 3710351 3710368 -82967180 + AT_rich Low_complexity Low_complexity 1 18 -13 1914 169 0 0 chr18 3710368 3710652 -82966896 + AluJo SINE Alu 1 284 -28 21 0 0 31 chr18 3710652 3710666 -82966882 + AT_rich Low_complexity Low_complexity 18 31 0 1770 142 0 34 chr18 3710668 3710963 -82966585 + AluSx SINE Alu 4 288 -24 227 285 58 47 chr18 3712155 3712368 -82965180 + MIR SINE MIR 39 253 -9 2586 50 0 3 chr18 3712459 3712761 -82964787 - AluY SINE Alu -10 301 1 314 234 16 65 chr18 3712852 3712976 -82964572 - MIR SINE MIR -19 243 126 1736 164 10 17 chr18 3713299 3713597 -82963951 + AluJb SINE Alu 1 296 -16 1894 130 3 109 chr18 3713797 3714023 -82963525 - MER2 DNA MER2_type 0 344 174 2199 101 0 0 chr18 3714023 3714301 -82963247 + AluSx SINE Alu 14 291 -21 1894 130 3 109 chr18 3714301 3714459 -82963089 - MER2 DNA MER2_type -170 174 1 199 256 0 0 chr18 3715174 3715213 -82962335 - L2 LINE L2 -23 3290 3252 695 162 24 108 chr18 3715470 3715541 -82962007 - MER7A DNA MER2_type -2887 151 102 2172 122 0 7 chr18 3715541 3715845 -82961703 + AluSx SINE Alu 3 304 -8 695 162 24 108 chr18 3715845 3715940 -82961608 - MER7A DNA MER2_type -2936 102 1 682 146 9 9 chr18 3716907 3717017 -82960531 + AluJo SINE Alu 16 125 -187 2425 86 3 13 chr18 3717035 3717350 -82960198 - AluSp SINE Alu -1 312 1 818 156 0 0 chr18 3717357 3717485 -82960063 - FLAM_C SINE Alu -5 128 1 795 229 12 0 chr18 3717485 3717655 -82959893 + AluJo SINE Alu 119 290 -22 1946 156 3 10 chr18 3718627 3718934 -82958614 - AluSx SINE Alu -7 305 1 300 267 53 8 chr18 3719153 3719284 -82958264 - L1ME LINE L1 -403 5718 5582 549 196 0 18 chr18 3719384 3719496 -82958052 - AluJo SINE Alu -1 311 202 5336 56 8 11 chr18 3719500 3720146 -82957402 + SVA Other Other 740 1383 -3 541 220 139 29 chr18 3720165 3720338 -82957210 + LTR23-int LTR ERV1 802 993 -4130 633 217 202 10 chr18 3720339 3720537 -82957011 + MER34C LTR ERV1 162 397 -188 555 141 73 147 chr18 3720537 3720728 -82956820 + LTR23-int LTR ERV1 1197 1373 -3750 1134 175 0 10 chr18 3720743 3720937 -82956611 - AluJo SINE Alu -101 211 20 2563 290 155 31 chr18 3721367 3721567 -82955981 + L2 LINE L2 842 1016 -2298 1959 148 7 7 chr18 3721567 3721864 -82955684 + AluSx SINE Alu 1 297 -15 2563 290 155 31 chr18 3721864 3722513 -82955035 + L2 LINE L2 1016 1583 -1731 2310 115 0 3 chr18 3722513 3722827 -82954721 - AluSq SINE Alu 0 313 1 2563 290 155 31 chr18 3722827 3723612 -82953936 + L2 LINE L2 1583 2269 -1045 2560 53 7 0 chr18 3723612 3723912 -82953636 - AluY SINE Alu -9 302 1 2563 290 155 31 chr18 3723912 3724170 -82953378 + L2 LINE L2 2269 2971 -343 2112 119 0 36 chr18 3724326 3724629 -82952919 - AluSx SINE Alu -20 292 1 1728 155 0 22 chr18 3724738 3725015 -82952533 + AluJo SINE Alu 13 283 -29 26 30 0 0 chr18 3725378 3725411 -82952137 + AT_rich Low_complexity Low_complexity 1 33 0 543 45 0 0 chr18 3725528 3725595 -82951953 + L1PB2 LINE L1 5928 5994 -157 2245 96 0 40 chr18 3725931 3726254 -82951294 - AluY SINE Alu -1 310 1 335 250 52 21 chr18 3726431 3726527 -82951021 - L2 LINE L2 -5 3308 3210 678 283 76 0 chr18 3726776 3726999 -82950549 + MIR SINE MIR 4 243 -19 1839 183 86 6 chr18 3727268 3727629 -82949919 - MLT1B LTR MaLR 0 390 1 2211 110 3 3 chr18 3727736 3728035 -82949513 - AluSq SINE Alu -14 299 1 1723 140 47 0 chr18 3728557 3728814 -82948734 + AluJo SINE Alu 18 286 -26 180 0 0 0 chr18 3729030 3729050 -82948498 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2278 124 0 0 chr18 3729851 3730157 -82947391 - AluSx SINE Alu -6 306 1 222 130 152 0 chr18 3730652 3730698 -82946850 + L2 LINE L2 3220 3272 0 1446 146 98 33 chr18 3730723 3730998 -82946550 - AluJo SINE Alu -17 295 3 1001 263 95 44 chr18 3732458 3732869 -82944679 - L1MEc LINE L1 -5699 697 266 443 277 118 52 chr18 3733093 3733458 -82944090 - L1MEd LINE L1 -5488 631 243 2204 108 10 0 chr18 3733567 3733863 -82943685 - AluJb SINE Alu -13 299 1 24 0 0 0 chr18 3734063 3734087 -82943461 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr18 3734240 3734265 -82943283 + AT_rich Low_complexity Low_complexity 1 25 0 2401 73 3 7 chr18 3734265 3734565 -82942983 - AluSp SINE Alu -10 303 5 180 0 0 0 chr18 3735252 3735272 -82942276 + (CCCCCA)n Simple_repeat Simple_repeat 3 22 0 1853 148 11 3 chr18 3735670 3735953 -82941595 - AluJo SINE Alu -23 289 5 407 19 19 0 chr18 3735989 3736041 -82941507 + (TG)n Simple_repeat Simple_repeat 1 53 0 3067 194 101 29 chr18 3737940 3738631 -82938917 - L1MD2 LINE L1 -24 6335 5595 25 0 0 0 chr18 3738634 3738659 -82938889 + AT_rich Low_complexity Low_complexity 1 25 0 836 153 0 0 chr18 3738664 3738782 -82938766 - FLAM_C SINE Alu -25 118 1 994 157 9 101 chr18 3738785 3739070 -82938478 - L1M2 LINE L1 -573 5591 5346 1649 173 7 24 chr18 3739861 3740156 -82937392 - AluJo SINE Alu -20 292 3 405 86 0 0 chr18 3740444 3740502 -82937046 + (TG)n Simple_repeat Simple_repeat 1 58 0 1702 136 57 0 chr18 3740502 3740766 -82936782 - AluJb SINE Alu -33 279 1 235 175 0 0 chr18 3740769 3740809 -82936739 + MER4E LTR ERV1 667 706 -73 2265 101 7 0 chr18 3741076 3741364 -82936184 - AluSx SINE Alu -22 290 1 2228 108 0 10 chr18 3741762 3742059 -82935489 - AluSg SINE Alu -16 294 1 2318 109 0 0 chr18 3742059 3742360 -82935188 - AluSx SINE Alu -10 302 1 853 138 23 0 chr18 3742687 3742817 -82934731 - FLAM_C SINE Alu 0 133 1 250 283 51 65 chr18 3742912 3743050 -82934498 + MER91A DNA MER1_type 37 172 -24 319 169 12 60 chr18 3743259 3743342 -82934206 + MIR3 SINE MIR 81 159 -49 1759 153 40 0 chr18 3743431 3743706 -82933842 + MER61D LTR ERV1 216 501 0 2187 88 58 3 chr18 3744504 3744799 -82932749 - AluSx SINE Alu -1 311 1 2091 117 10 17 chr18 3745772 3746072 -82931476 - AluSx SINE Alu -14 298 1 1931 98 29 4 chr18 3746427 3746704 -82930844 - AluSc SINE Alu -14 295 12 1792 157 10 33 chr18 3746716 3747021 -82930527 - AluJo SINE Alu -13 299 2 189 125 62 0 chr18 3747187 3747219 -82930329 + MIR3 SINE MIR 125 158 -50 26 0 0 0 chr18 3747404 3747430 -82930118 + AT_rich Low_complexity Low_complexity 1 26 0 2348 96 0 0 chr18 3747748 3748041 -82929507 - AluSx SINE Alu -15 297 5 1679 180 20 20 chr18 3748122 3748428 -82929120 - AluJb SINE Alu -1 311 6 1121 197 119 26 chr18 3748543 3748812 -82928736 - AluJo SINE Alu -14 298 5 255 247 81 48 chr18 3749875 3750061 -82927487 + L1ME4a LINE L1 5927 6118 -3 2364 95 0 0 chr18 3750095 3750390 -82927158 + AluSx SINE Alu 1 295 -17 34 65 0 0 chr18 3750428 3750490 -82927058 + AT_rich Low_complexity Low_complexity 1 62 0 2425 85 3 0 chr18 3750555 3750849 -82926699 + AluSg SINE Alu 1 295 -15 294 342 34 0 chr18 3750960 3751077 -82926471 - MIR SINE MIR -92 170 50 2124 126 21 15 chr18 3751629 3751963 -82925585 - MER1B DNA MER1_type 0 337 2 543 275 109 0 chr18 3752015 3752208 -82925340 + MIR SINE MIR 27 240 -22 372 133 0 0 chr18 3753089 3753149 -82924399 + (T)n Simple_repeat Simple_repeat 1 60 0 222 37 0 0 chr18 3753280 3753307 -82924241 + (A)n Simple_repeat Simple_repeat 1 27 0 1297 161 125 69 chr18 3753347 3753682 -82923866 + MLT1A2 LTR MaLR 21 374 0 2289 85 3 20 chr18 3754444 3754750 -82922798 + AluSx SINE Alu 1 301 -11 1870 171 0 3 chr18 3754939 3755237 -82922311 - AluJb SINE Alu -15 297 1 385 301 175 5 chr18 3755351 3755557 -82921991 - MIR SINE MIR -4 258 18 202 319 7 56 chr18 3757577 3757721 -82919827 - L2 LINE L2 -203 3069 2933 243 284 147 9 chr18 3758704 3758813 -82918735 + MER5A DNA MER1_type 63 186 -3 26 0 0 0 chr18 3759738 3759764 -82917784 + AT_rich Low_complexity Low_complexity 1 26 0 250 224 75 0 chr18 3760521 3760588 -82916960 + L2 LINE L2 3234 3305 -8 228 111 0 0 chr18 3760589 3760625 -82916923 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 2179 98 14 10 chr18 3760764 3761087 -82916461 + AluSx SINE Alu 1 312 0 1953 217 85 20 chr18 3762210 3762632 -82914916 - L1ME1 LINE L1 -15 6151 5689 1974 127 96 9 chr18 3762632 3762964 -82914584 - MER46B DNA MER2_type 0 236 1 1953 217 85 20 chr18 3762964 3763047 -82914501 - L1ME1 LINE L1 -477 5689 5613 2063 71 64 11 chr18 3763094 3763375 -82914173 - AluY SINE Alu -13 298 3 1563 193 0 23 chr18 3763708 3764014 -82913534 + AluJb SINE Alu 1 299 -13 322 285 107 0 chr18 3764033 3764182 -82913366 - MIR SINE MIR -53 209 47 2106 98 7 0 chr18 3764342 3764619 -82912929 - AluSp SINE Alu -22 291 13 1635 156 57 3 chr18 3765923 3766205 -82911343 + AluJb SINE Alu 1 297 -15 3402 194 89 77 chr18 3766246 3766908 -82910640 + L1MC4a LINE L1 6525 7208 -600 2063 119 20 7 chr18 3766908 3767210 -82910338 + AluSx SINE Alu 1 306 -6 3402 194 89 77 chr18 3767210 3767658 -82909890 + L1MC4a LINE L1 7208 7649 -159 468 160 13 0 chr18 3768064 3768139 -82909409 - AluS SINE Alu -237 76 1 22 35 0 0 chr18 3768666 3768695 -82908853 + AT_rich Low_complexity Low_complexity 1 29 0 22 56 0 0 chr18 3771338 3771374 -82906174 + AT_rich Low_complexity Low_complexity 1 36 0 1329 171 48 22 chr18 3772566 3772881 -82904667 + MER33 DNA MER1_type 2 324 0 309 321 30 30 chr18 3773708 3773842 -82903706 - MIR3 SINE MIR -65 143 10 195 42 0 0 chr18 3775548 3775572 -82901976 + (A)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr18 3776672 3776693 -82900855 + AT_rich Low_complexity Low_complexity 1 21 0 1635 106 111 0 chr18 3776810 3777045 -82900503 + AluSx SINE Alu 50 310 -2 189 0 0 0 chr18 3777150 3777171 -82900377 + (A)n Simple_repeat Simple_repeat 1 21 0 3000 162 115 18 chr18 3777555 3778183 -82899365 + MER50 LTR ERV1 14 702 -32 430 325 0 0 chr18 3780659 3780813 -82896735 + (TGGA)n Simple_repeat Simple_repeat 4 157 0 296 214 0 10 chr18 3780853 3780956 -82896592 + (TGGA)n Simple_repeat Simple_repeat 1 102 0 194 313 196 0 chr18 3781404 3781516 -82896032 + MIR SINE MIR 119 252 -10 238 293 61 0 chr18 3781637 3781736 -82895812 - MIR SINE MIR -78 184 80 659 133 100 0 chr18 3782373 3782493 -82895055 - FLAM_C SINE Alu 0 133 2 2253 63 11 7 chr18 3782518 3782803 -82894745 + AluSx SINE Alu 11 296 -16 2121 92 48 0 chr18 3782806 3783099 -82894449 + AluSq SINE Alu 1 307 -6 257 320 48 0 chr18 3783643 3783746 -82893802 + MIR SINE MIR 118 225 -37 216 316 180 18 chr18 3784243 3784515 -82893033 + L2 LINE L2 1696 2011 -1303 859 175 7 13 chr18 3785085 3785239 -82892309 - FRAM SINE Alu -13 163 11 387 336 0 7 chr18 3785725 3785862 -82891686 - MIR SINE MIR -107 155 20 947 119 0 0 chr18 3785930 3786056 -82891492 - AluSq/x SINE Alu -185 127 2 2080 113 14 0 chr18 3786664 3786977 -82890571 + AluSx SINE Alu 1 317 0 1675 178 0 60 chr18 3787013 3787345 -82890203 + AluJo SINE Alu 1 312 0 2211 60 3 39 chr18 3787408 3787691 -82889857 + AluY SINE Alu 1 273 -38 1118 76 0 0 chr18 3787808 3787940 -82889608 - AluSq/x SINE Alu -179 133 2 360 0 0 0 chr18 3789426 3789466 -82888082 + (T)n Simple_repeat Simple_repeat 1 40 0 31 0 0 0 chr18 3789479 3789510 -82888038 + GC_rich Low_complexity Low_complexity 1 31 0 438 36 0 0 chr18 3789630 3789686 -82887862 + (T)n Simple_repeat Simple_repeat 1 56 0 710 178 86 20 chr18 3789686 3789838 -82887710 - FRAM SINE Alu 0 166 5 468 127 28 0 chr18 3792061 3792132 -82885416 - AluS SINE Alu -239 74 2 1051 112 6 29 chr18 3792179 3792349 -82885199 + FRAM SINE Alu 8 173 -3 1685 279 81 29 chr18 3792350 3792713 -82884835 - L1 LINE L1 -1695 4451 4108 1789 156 26 13 chr18 3792713 3793021 -82884527 - AluJb SINE Alu 0 312 1 1685 279 81 29 chr18 3793021 3793579 -82883969 - L1 LINE L1 -2038 4108 3478 327 246 101 40 chr18 3793758 3794055 -82883493 - L1 LINE L1 -2948 3198 2884 2630 48 0 10 chr18 3794098 3794409 -82883139 - AluY SINE Alu -3 308 1 244 167 118 49 chr18 3794426 3794528 -82883020 - MIR SINE MIR 0 262 154 763 271 35 31 chr18 3794530 3794788 -82882760 - MLT1L LTR MaLR -8 607 349 2382 94 0 0 chr18 3794920 3795218 -82882330 - AluSg SINE Alu -12 298 1 2171 112 0 16 chr18 3795362 3795665 -82881883 + AluSg SINE Alu 1 298 -12 2128 126 0 7 chr18 3795692 3795994 -82881554 - AluSx SINE Alu -12 300 1 2337 99 0 3 chr18 3796326 3796630 -82880918 + AluSx SINE Alu 8 310 -2 424 376 5 5 chr18 3796896 3797098 -82880450 - L2 LINE L2 -219 3053 2852 1575 149 58 15 chr18 3797834 3798095 -82879453 - AluJb SINE Alu -40 272 1 2416 98 0 0 chr18 3798177 3798483 -82879065 - AluSx SINE Alu -6 306 1 182 36 0 36 chr18 3798492 3798520 -82879028 + (TTTTTA)n Simple_repeat Simple_repeat 1 27 0 2519 74 0 10 chr18 3798522 3798833 -82878715 - AluY SINE Alu -3 308 1 944 119 0 0 chr18 3798842 3798968 -82878580 - FLAM_C SINE Alu -12 131 6 1848 154 24 0 chr18 3799940 3800232 -82877316 - AluJb SINE Alu -13 299 1 1227 143 0 11 chr18 3800630 3800812 -82876736 + AluJb SINE Alu 127 306 -6 2428 164 31 60 chr18 3800813 3801333 -82876215 + LTR54 LTR ERV1 5 509 -1 1868 147 41 0 chr18 3802201 3802494 -82875054 + AluSx SINE Alu 1 305 -7 722 259 155 3 chr18 3803038 3803354 -82874194 - L1ME3A LINE L1 -246 5924 5561 630 176 0 0 chr18 3803372 3803480 -82874068 + FLAM_A SINE Alu 21 128 -14 2036 98 58 0 chr18 3804147 3804424 -82873124 + AluSx SINE Alu 1 293 -19 239 185 41 0 chr18 3804442 3804503 -82873045 - L1ME3A LINE L1 -696 5469 5403 22 0 0 0 chr18 3804663 3804685 -82872863 + AT_rich Low_complexity Low_complexity 1 22 0 583 252 42 56 chr18 3804780 3804801 -82872747 - L1ME3A LINE L1 -743 5403 5383 3655 43 9 0 chr18 3804801 3805238 -82872310 - L1PA5 LINE L1 -3 6151 5711 583 252 42 56 chr18 3805238 3805260 -82872288 - L1ME3A LINE L1 -763 5383 5362 1171 199 125 62 chr18 3805260 3805683 -82871865 + LTR7 LTR ERV1 1 450 0 583 252 42 56 chr18 3805683 3806068 -82871480 - L1ME3A LINE L1 -784 5362 5028 1013 172 116 95 chr18 3806273 3806622 -82870926 + MSTC LTR MaLR 3 420 -8 263 262 58 48 chr18 3806644 3806747 -82870801 - L1ME3A LINE L1 -1231 4915 4812 30 36 0 18 chr18 3806749 3806762 -82870786 + AT_rich Low_complexity Low_complexity 1 13 -41 863 128 0 0 chr18 3806762 3806879 -82870669 + FLAM_C SINE Alu 1 117 -16 30 36 0 18 chr18 3806879 3806920 -82870628 + AT_rich Low_complexity Low_complexity 13 54 0 782 185 0 27 chr18 3806932 3807078 -82870470 - FLAM_C SINE Alu 0 143 2 745 124 58 36 chr18 3807085 3807222 -82870326 - L1MA8 LINE L1 -7 6284 6145 310 295 72 0 chr18 3807366 3807505 -82870043 - L1ME3A LINE L1 -1542 4604 4456 822 150 0 8 chr18 3807519 3807639 -82869909 + AluJo/FLAM SINE Alu 2 120 -192 2373 97 0 0 chr18 3807641 3807941 -82869607 - AluSx SINE Alu -12 300 1 25 0 0 0 chr18 3807949 3807974 -82869574 + AT_rich Low_complexity Low_complexity 1 25 0 26 0 0 0 chr18 3809547 3809573 -82867975 + AT_rich Low_complexity Low_complexity 1 26 0 303 212 139 73 chr18 3809803 3809954 -82867594 - MIR SINE MIR -34 228 68 2423 99 0 0 chr18 3810369 3810671 -82866877 - AluSx SINE Alu -10 302 1 1559 167 30 50 chr18 3811048 3811185 -82866363 + AluJo SINE Alu 1 139 -173 2362 98 0 0 chr18 3811185 3811480 -82866068 + AluSq SINE Alu 1 295 -18 1559 167 30 50 chr18 3811480 3811641 -82865907 + AluJo SINE Alu 139 293 -19 25 31 0 0 chr18 3811647 3811679 -82865869 + AT_rich Low_complexity Low_complexity 1 32 0 2150 117 0 0 chr18 3811878 3812183 -82865365 - AluSx SINE Alu 0 305 1 277 346 59 0 chr18 3812225 3812326 -82865222 + L2 LINE L2 3166 3272 0 1699 173 21 7 chr18 3812360 3812644 -82864904 - AluJo SINE Alu -24 288 1 469 198 108 0 chr18 3812838 3812949 -82864599 + LTR16A1 LTR ERVL 234 356 -101 432 98 16 0 chr18 3813719 3813780 -82863768 + U7 snRNA snRNA 1 62 -1 785 155 0 0 chr18 4014044 4014160 -82663388 - AluJo/FLAM SINE Alu -194 118 3 737 262 215 39 chr18 4014561 4015210 -82662338 + L2 LINE L2 2544 3311 -2 264 294 92 0 chr18 4015213 4015332 -82662216 - MIR SINE MIR -1 261 132 438 287 67 13 chr18 4016002 4016182 -82661366 + MIR SINE MIR 1 190 -62 26 30 0 0 chr18 4017735 4017768 -82659780 + AT_rich Low_complexity Low_complexity 1 33 0 2080 162 34 7 chr18 4018770 4019177 -82658371 + LTR65 LTR ERV1 1 418 -251 510 216 0 0 chr18 4019219 4019321 -82658227 + LTR65 LTR ERV1 567 668 -1 2049 103 3 10 chr18 4019779 4020070 -82657478 + AluSq SINE Alu 1 289 -24 343 235 88 108 chr18 4020141 4020345 -82657203 - L1M2 LINE L1 -5816 1033 834 1461 153 21 0 chr18 4020616 4020858 -82656690 + AluJo SINE Alu 56 302 -10 753 235 185 66 chr18 4021152 4021223 -82656325 - L2 LINE L2 -5 3308 3247 2182 111 3 0 chr18 4021223 4021529 -82656019 + AluSx SINE Alu 1 307 -5 753 235 185 66 chr18 4021529 4022063 -82655485 - L2 LINE L2 -66 3247 2634 2044 177 10 13 chr18 4022070 4022455 -82655093 + MLT1B LTR MaLR 7 390 0 1598 212 78 32 chr18 4022456 4022918 -82654630 - L2 LINE L2 -688 2626 2144 852 151 48 0 chr18 4022940 4023066 -82654482 + AluJb SINE Alu 4 135 -177 650 348 27 16 chr18 4025872 4026128 -82651420 + MIR SINE MIR 4 262 0 1907 130 20 20 chr18 4026263 4026555 -82650993 - AluJb SINE Alu -20 292 1 416 323 92 18 chr18 4026627 4026844 -82650704 - MIR SINE MIR -10 252 20 210 150 0 0 chr18 4027949 4027989 -82649559 + (CA)n Simple_repeat Simple_repeat 1 40 0 295 274 149 66 chr18 4028006 4028117 -82649431 + MIR SINE MIR 2 102 -160 1990 135 7 10 chr18 4028117 4028414 -82649134 - AluJb SINE Alu -16 296 1 295 274 149 66 chr18 4028414 4028543 -82649005 + MIR SINE MIR 102 262 0 567 226 9 9 chr18 4028746 4028861 -82648687 + MIR3 SINE MIR 82 196 -12 2058 118 24 0 chr18 4029262 4029550 -82647998 - AluSx SINE Alu -16 296 2 2180 98 0 11 chr18 4029885 4030194 -82647354 - AluSg1 SINE Alu 0 306 1 2144 64 18 14 chr18 4030208 4030515 -82647033 - AluY SINE Alu 0 308 1 234 339 0 0 chr18 4031962 4032027 -82645521 + L2 LINE L2 3243 3307 -6 202 229 0 0 chr18 4032394 4032442 -82645106 + T-rich Low_complexity Low_complexity 1 48 0 2243 104 19 82 chr18 4032481 4032765 -82644783 + L1MB3 LINE L1 5780 6030 -153 2042 115 10 7 chr18 4032765 4033053 -82644495 + AluSg SINE Alu 1 289 -21 2243 104 19 82 chr18 4033053 4033192 -82644356 + L1MB3 LINE L1 6030 6176 -7 1576 246 54 32 chr18 4033201 4033705 -82643843 - LTR40a LTR ERVL -4 515 1 1058 256 30 3 chr18 4033829 4034157 -82643391 - L1ME1 LINE L1 -5 6161 5825 665 293 6 6 chr18 4034447 4034611 -82642937 + MER5B DNA MER1_type 2 165 -13 2329 88 3 23 chr18 4034915 4035223 -82642325 + AluSp SINE Alu 1 302 -11 13557 211 11 24 chr18 4035325 4035602 -82641946 + L1PB3 LINE L1 2565 2844 -4729 2067 104 0 0 chr18 4035602 4035861 -82641687 - AluSg SINE Alu -17 293 35 13557 211 11 24 chr18 4035861 4037530 -82640018 + L1PB3 LINE L1 2844 4534 -3039 1790 168 3 7 chr18 4037530 4037822 -82639726 + AluJb SINE Alu 1 291 -21 13557 211 11 24 chr18 4037822 4039347 -82638201 + L1PB3 LINE L1 4534 6386 -1187 2237 94 3 3 chr18 4039347 4039644 -82637904 + AluY SINE Alu 1 297 -14 13557 211 11 24 chr18 4039644 4040266 -82637282 + L1PB3 LINE L1 6386 7015 -558 747 131 0 0 chr18 4040315 4040422 -82637126 - FLAM_C SINE Alu -32 111 5 2185 113 0 0 chr18 4040438 4040764 -82636784 - AluSx SINE Alu 0 326 1 3667 106 13 6 chr18 4040779 4041324 -82636224 + L1PB3 LINE L1 7018 7566 -7 25 0 0 0 chr18 4041335 4041360 -82636188 + AT_rich Low_complexity Low_complexity 1 25 0 1185 199 5 9 chr18 4041415 4041631 -82635917 - AluJo SINE Alu -12 300 86 235 286 0 0 chr18 4041729 4041785 -82635763 - MER5A DNA MER1_type -6 183 128 1265 129 50 10 chr18 4041787 4041988 -82635560 + AluSq SINE Alu 85 293 -20 379 186 8 31 chr18 4042005 4042114 -82635434 - MER5A DNA MER1_type -80 109 4 285 216 148 0 chr18 4042119 4042207 -82635341 - L1MC5 LINE L1 -527 7434 7334 1721 147 39 3 chr18 4042323 4042630 -82634918 + Tigger3(Golem) DNA MER2_type 2711 3028 -1 525 337 0 0 chr18 4043895 4044067 -82633481 + MIR SINE MIR 88 259 -3 2296 58 7 7 chr18 4044854 4045148 -82632400 + AluY SINE Alu 1 294 -17 30 45 0 0 chr18 4045470 4045514 -82632034 + AT_rich Low_complexity Low_complexity 1 44 0 23 54 0 0 chr18 4045706 4045743 -82631805 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr18 4045934 4045956 -82631592 + AT_rich Low_complexity Low_complexity 1 22 0 1307 253 28 43 chr18 4046004 4046190 -82631358 + L1ME1 LINE L1 5636 5823 -343 2517 58 10 10 chr18 4046190 4046501 -82631047 + AluSx SINE Alu 1 311 -1 1307 253 28 43 chr18 4046501 4046851 -82630697 + L1ME1 LINE L1 5823 6164 -2 647 122 56 0 chr18 4047035 4047142 -82630406 - AluJb SINE Alu -30 282 170 1084 76 69 0 chr18 4047243 4047414 -82630134 + AluSg/x SINE Alu 128 308 0 1284 0 27 0 chr18 4047561 4047708 -82629840 + L1PA4 LINE L1 5998 6148 -7 214 316 194 0 chr18 4048045 4048143 -82629405 - MIR3 SINE MIR -28 180 64 939 234 35 26 chr18 4051964 4052190 -82625358 + MIR SINE MIR 21 248 -14 305 206 41 27 chr18 4052561 4052634 -82624914 + L2 LINE L2 3192 3265 -7 238 310 239 0 chr18 4052697 4052810 -82624738 - MIR3 SINE MIR -63 145 6 1846 155 24 7 chr18 4054495 4054786 -82622762 - AluJb SINE Alu -16 296 1 180 271 21 0 chr18 4054956 4055004 -82622544 - L2 LINE L2 -6 3266 3218 1767 169 17 7 chr18 4055572 4055868 -82621680 + AluJo SINE Alu 1 299 -13 376 338 27 14 chr18 4056344 4056492 -82621056 + MIR SINE MIR 2 151 -111 207 147 400 32 chr18 4056536 4056631 -82620917 + MIR SINE MIR 14 143 -119 498 189 66 0 chr18 4057568 4057674 -82619874 + MER3 DNA MER1_type 2 114 -95 2285 78 0 3 chr18 4057675 4057968 -82619580 + AluSc SINE Alu 1 292 -17 999 171 0 0 chr18 4057992 4058156 -82619392 + FAM SINE Alu 5 168 -7 247 173 0 39 chr18 4058179 4058231 -82619317 + MER3 DNA MER1_type 159 208 -1 235 224 0 0 chr18 4058191 4058240 -82619308 - MER3 DNA MER1_type -121 88 40 * 334 269 124 7 chr18 4058390 4058535 -82619013 + MER5A DNA MER1_type 27 188 -1 2241 74 0 4 chr18 4059220 4059491 -82618057 - AluSx SINE Alu -15 297 28 2337 79 0 16 chr18 4059672 4059988 -82617560 + AluY SINE Alu 1 311 0 380 250 133 8 chr18 4060457 4060577 -82616971 + L2 LINE L2 3137 3271 -1 2263 102 0 0 chr18 4060589 4060893 -82616655 + AluSg1 SINE Alu 1 304 -5 300 284 0 12 chr18 4060923 4061004 -82616544 - MER5B DNA MER1_type 0 178 99 247 222 142 68 chr18 4061058 4061220 -82616328 + L1M4 LINE L1 65 238 -6304 306 301 89 92 chr18 4061377 4061647 -82615901 + L1M4 LINE L1 485 755 -5787 2388 88 0 3 chr18 4061647 4061941 -82615607 + AluSc SINE Alu 1 293 -16 306 301 89 92 chr18 4061941 4062062 -82615486 + L1M4 LINE L1 755 875 -5667 362 173 0 0 chr18 4062210 4062285 -82615263 + AluS SINE Alu 226 300 0 11195 226 56 22 chr18 4062285 4063213 -82614335 + L1M4 LINE L1 937 1832 -4850 2247 102 0 10 chr18 4063213 4063518 -82614030 + AluSx SINE Alu 1 302 -10 11195 226 56 22 chr18 4063518 4063747 -82613801 + L1M4 LINE L1 1832 2052 -4630 1858 165 21 0 chr18 4063747 4064038 -82613510 - AluJb SINE Alu -13 299 3 11195 226 56 22 chr18 4064038 4067802 -82609746 + L1M4 LINE L1 2052 6125 -557 390 322 7 42 chr18 4067948 4068091 -82609457 - L2 LINE L2 -1 3271 3134 10419 86 8 0 chr18 4068264 4069620 -82607928 + THE1B-int LTR MaLR 214 1580 0 2322 109 77 40 chr18 4069620 4069928 -82607620 + THE1B LTR MaLR 1 325 -39 2214 122 0 0 chr18 4069928 4070224 -82607324 - AluSx SINE Alu -16 296 1 2322 109 77 40 chr18 4070224 4070265 -82607283 + THE1B LTR MaLR 325 363 -1 201 225 0 0 chr18 4070936 4070976 -82606572 + MIR SINE MIR 59 98 -164 187 329 41 14 chr18 4070981 4071054 -82606494 - L2 LINE L2 -7 3265 3191 383 304 131 11 chr18 4071090 4071281 -82606267 + MIR SINE MIR 27 240 -22 1018 171 40 63 chr18 4071455 4071677 -82605871 - MER20 DNA MER1_type -2 217 1 232 246 14 14 chr18 4071677 4071746 -82605802 - MER112 DNA MER1_type -35 225 157 668 156 90 48 chr18 4071747 4071914 -82605634 + MLT1A2 LTR MaLR 1 174 -216 723 142 0 0 chr18 4071914 4072020 -82605528 + AluSq/x SINE Alu 28 133 -180 1636 146 9 50 chr18 4072024 4072345 -82605203 + AluSx SINE Alu 1 308 -4 911 180 49 38 chr18 4072407 4072590 -82604958 + MLT1A2 LTR MaLR 186 370 -4 639 170 38 0 chr18 4072686 4072792 -82604756 + AluJb SINE Alu 174 283 -29 186 43 0 0 chr18 4073037 4073060 -82604488 + (TGAA)n Simple_repeat Simple_repeat 2 24 0 210 356 82 34 chr18 4073074 4073341 -82604207 + L2 LINE L2 2888 3167 -105 219 340 20 50 chr18 4073773 4073873 -82603675 - MER5A DNA MER1_type -53 136 40 23 33 0 0 chr18 4075126 4075156 -82602392 + AT_rich Low_complexity Low_complexity 1 30 0 2123 125 0 0 chr18 4075165 4075461 -82602087 + AluSx SINE Alu 1 296 -16 613 235 21 77 chr18 4075521 4075755 -82601793 + L1ME1 LINE L1 5942 6162 -4 21 36 0 0 chr18 4075987 4076015 -82601533 + AT_rich Low_complexity Low_complexity 1 28 0 590 329 46 4 chr18 4077066 4077303 -82600245 + MIR SINE MIR 2 248 -14 391 306 29 79 chr18 4077753 4078044 -82599504 - L1MEd LINE L1 -940 1550 1194 931 111 0 22 chr18 4078044 4078179 -82599369 - FLAM_C SINE Alu -1 132 1 391 306 29 79 chr18 4078179 4078365 -82599183 - L1MEd LINE L1 -1296 1194 1000 2770 255 65 91 chr18 4078697 4080244 -82597304 - L2 LINE L2 0 3313 1813 986 151 3 6 chr18 4080256 4080436 -82597112 + L1MB3 LINE L1 5652 5828 -340 2448 66 3 0 chr18 4080436 4080737 -82596811 + AluY SINE Alu 1 302 -9 24 0 0 0 chr18 4080873 4080897 -82596651 + AT_rich Low_complexity Low_complexity 1 24 0 2201 100 3 13 chr18 4081403 4081703 -82595845 + AluSx SINE Alu 1 297 -15 37 0 0 0 chr18 4082294 4082331 -82595217 + GC_rich Low_complexity Low_complexity 1 37 0 1596 139 58 20 chr18 4082362 4082656 -82594892 + L1MB3 LINE L1 5814 6118 -65 2927 118 2 33 chr18 4082660 4083110 -82594438 - MER1A DNA MER1_type -5 524 89 329 154 31 0 chr18 4083153 4083218 -82594330 + L1MB3 LINE L1 6110 6176 -7 212 274 29 88 chr18 4083223 4083325 -82594223 - L2 LINE L2 -1490 1824 1729 2340 199 12 41 chr18 4083353 4083865 -82593683 - MLT1D LTR MaLR -3 502 6 712 243 193 23 chr18 4083870 4084170 -82593378 - L2 LINE L2 -1621 1693 1343 432 258 10 0 chr18 4086125 4086222 -82591326 + MIR3 SINE MIR 107 204 -4 1251 131 4 57 chr18 4086391 4086620 -82590928 + AluJb SINE Alu 1 217 -95 1734 220 57 18 chr18 4087091 4087628 -82589920 + MLT2F LTR ERVL 1 606 -57 488 198 16 141 chr18 4087663 4087855 -82589693 + MER21B LTR ERV1 141 308 -555 291 221 128 23 chr18 4088316 4088402 -82589146 + MER21B LTR ERV1 620 714 -149 433 253 10 0 chr18 4088405 4088504 -82589044 - L1MC5 LINE L1 -72 7889 7790 198 0 0 0 chr18 4088654 4088676 -82588872 + (T)n Simple_repeat Simple_repeat 1 22 0 2084 118 0 38 chr18 4088800 4089114 -82588434 - AluSx SINE Alu -10 302 1 1908 138 10 19 chr18 4089311 4089623 -82587925 + AluSx SINE Alu 4 312 0 1945 79 4 0 chr18 4090287 4090540 -82587008 + AluSp SINE Alu 1 254 -59 709 273 42 34 chr18 4091109 4091221 -82586327 + MIR SINE MIR 20 130 -132 4775 103 8 3 chr18 4091221 4091852 -82585696 - MER51A LTR ERV1 0 634 1 709 273 42 34 chr18 4091852 4091977 -82585571 + MIR SINE MIR 130 259 -3 850 89 0 68 chr18 4092725 4092916 -82584632 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 480 124 21 10 chr18 4092917 4093014 -82584534 + GA-rich Low_complexity Low_complexity 4 101 0 366 254 15 62 chr18 4094530 4094586 -82582962 - MIR SINE MIR -52 210 153 2225 98 3 3 chr18 4094586 4094883 -82582665 - AluSq SINE Alu -16 297 1 366 254 15 62 chr18 4094883 4094956 -82582592 - MIR SINE MIR -109 153 87 310 329 99 36 chr18 4096545 4096767 -82580781 + MIR SINE MIR 21 256 -6 2369 80 0 3 chr18 4096918 4097217 -82580331 - AluY SINE Alu -13 298 1 1888 148 0 17 chr18 4098208 4098498 -82579050 + AluJb SINE Alu 1 285 -27 548 177 0 9 chr18 4098498 4098611 -82578937 + (CATATA)n Simple_repeat Simple_repeat 5 116 0 251 269 0 0 chr18 4099795 4099847 -82577701 - Charlie4 DNA MER1_type -1909 52 1 451 130 122 70 chr18 4099852 4099967 -82577581 + L1MC3 LINE L1 7659 7779 -6 1980 139 3 0 chr18 4101916 4102217 -82575331 - AluSx SINE Alu -10 302 1 287 167 19 0 chr18 4103479 4103533 -82574015 + AluJ/FRAM SINE Alu 215 269 -33 279 79 0 0 chr18 4103649 4103687 -82573861 + (A)n Simple_repeat Simple_repeat 1 38 0 21 36 0 0 chr18 4103782 4103810 -82573738 + AT_rich Low_complexity Low_complexity 1 28 0 1397 65 6 0 chr18 4104142 4104312 -82573236 - L1PA5 LINE L1 0 6154 5984 2046 121 3 0 chr18 4104555 4104845 -82572703 + AluSx SINE Alu 1 291 -21 258 271 315 24 chr18 4105745 4105996 -82571552 - L2 LINE L2 -21 3292 2969 329 281 115 0 chr18 4106109 4106248 -82571300 - L2 LINE L2 -600 2714 2560 2069 119 34 10 chr18 4106746 4107041 -82570507 - AluSx SINE Alu -10 302 1 422 288 56 0 chr18 4107041 4107166 -82570382 - MIR SINE MIR -96 166 35 210 263 120 90 chr18 4107247 4107380 -82570168 - MIR SINE MIR -75 187 51 28 29 0 0 chr18 4107556 4107591 -82569957 + AT_rich Low_complexity Low_complexity 1 35 0 289 145 32 0 chr18 4108114 4108176 -82569372 + CT-rich Low_complexity Low_complexity 1 64 0 194 276 17 0 chr18 4108176 4108234 -82569314 - L2 LINE L2 -1 3271 3213 188 296 0 0 chr18 4108345 4108389 -82569159 - MIR SINE MIR -108 154 111 1794 82 0 0 chr18 4108565 4108784 -82568764 - AluSg/x SINE Alu -16 294 76 2303 80 7 0 chr18 4111031 4111330 -82566218 + AluSp SINE Alu 1 301 -12 1758 129 198 69 chr18 4112345 4112724 -82564824 - MSTA LTR MaLR 0 428 1 271 299 58 22 chr18 4112950 4113087 -82564461 - L2 LINE L2 -833 2481 2340 7792 137 9 23 chr18 4113102 4114044 -82563504 - L1MA3 LINE L1 0 7724 6771 2264 120 0 0 chr18 4114044 4114345 -82563203 - AluSx SINE Alu -11 301 1 7792 137 9 23 chr18 4114345 4114895 -82562653 - L1MA3 LINE L1 -953 6771 6215 2359 77 0 42 chr18 4114895 4115208 -82562340 - AluSg SINE Alu -10 300 1 7792 137 9 23 chr18 4115208 4115600 -82561948 - L1MA3 LINE L1 -1509 6215 5819 1896 157 0 32 chr18 4115600 4115912 -82561636 - AluJo SINE Alu -6 306 5 7792 137 9 23 chr18 4115912 4116087 -82561461 - L1MA3 LINE L1 -1905 5819 5643 2333 121 0 0 chr18 4116087 4116393 -82561155 - AluSx SINE Alu -6 306 1 7792 137 9 23 chr18 4116393 4117374 -82560174 - L1MA3 LINE L1 -2081 5643 4707 6758 98 35 28 chr18 4117371 4118607 -82558941 - L1MA3 LINE L1 -3820 3745 2499 * 339 321 115 32 chr18 4118661 4118822 -82558726 - L2 LINE L2 -1265 2049 1864 2179 154 61 11 chr18 4118822 4119199 -82558349 - MSTD LTR MaLR 0 396 1 339 321 115 32 chr18 4119199 4119255 -82558293 - L2 LINE L2 -1450 1864 1814 369 250 140 0 chr18 4119302 4119402 -82558146 + MER81 DNA DNA 1 114 0 1948 159 0 22 chr18 4119490 4119805 -82557743 - AluJo SINE Alu -4 308 1 1603 213 61 9 chr18 4120912 4121425 -82556123 + MLT2F LTR ERVL 1 585 -78 1110 256 59 86 chr18 4121484 4122074 -82555474 + MER21B LTR ERV1 141 714 -149 388 253 10 0 chr18 4122077 4122176 -82555372 - L1MC5 LINE L1 -72 7889 7790 2391 76 3 3 chr18 4122327 4122629 -82554919 - AluSg SINE Alu -8 302 1 2735 289 27 28 chr18 4122674 4123987 -82553561 + L1PB3 LINE L1 3 1313 -5550 * 13738 206 17 27 chr18 4123982 4124717 -82552831 + L1PB3 LINE L1 1764 2505 -4365 2067 104 0 0 chr18 4124717 4124976 -82552572 - AluSg SINE Alu -17 293 35 13738 206 17 27 chr18 4124976 4126645 -82550903 + L1PB3 LINE L1 2505 4189 -2681 1777 171 3 7 chr18 4126645 4126937 -82550611 + AluJb SINE Alu 1 291 -21 13738 206 17 27 chr18 4126937 4128461 -82549087 + L1PB3 LINE L1 4189 5684 -1186 2292 91 0 3 chr18 4128461 4128759 -82548789 + AluY SINE Alu 1 297 -14 13738 206 17 27 chr18 4128759 4129382 -82548166 + L1PB3 LINE L1 5684 6312 -558 747 131 0 0 chr18 4129431 4129538 -82548010 - FLAM_C SINE Alu -32 111 5 2185 113 0 0 chr18 4129554 4129880 -82547668 - AluSx SINE Alu 0 326 1 3650 108 13 6 chr18 4129895 4130440 -82547108 + L1PB3 LINE L1 6315 6863 -7 27 0 0 0 chr18 4130451 4130478 -82547070 + AT_rich Low_complexity Low_complexity 1 27 0 1185 199 5 9 chr18 4130533 4130749 -82546799 - AluJo SINE Alu -12 300 86 224 304 0 0 chr18 4130847 4130903 -82546645 - MER5A DNA MER1_type -6 183 128 1265 129 50 10 chr18 4130905 4131106 -82546442 + AluSq SINE Alu 85 293 -20 360 194 8 31 chr18 4131123 4131232 -82546316 - MER5A DNA MER1_type -80 109 4 285 216 148 0 chr18 4131237 4131325 -82546223 - L1MC5 LINE L1 -527 7434 7334 1707 150 39 3 chr18 4131441 4131748 -82545800 + Tigger3(Golem) DNA MER2_type 2711 3028 -1 525 337 0 0 chr18 4133013 4133185 -82544363 + MIR SINE MIR 88 259 -3 2076 103 7 13 chr18 4133972 4134274 -82543274 + AluSc SINE Alu 1 300 -9 2403 79 0 10 chr18 4134362 4134667 -82542881 - AluY SINE Alu -9 302 1 262 286 51 10 chr18 4134982 4135080 -82542468 + MER58A DNA MER1_type 1 102 -5 2562 44 0 0 chr18 4135156 4135451 -82542097 + AluY SINE Alu 1 295 -16 30 45 0 0 chr18 4135773 4135817 -82541731 + AT_rich Low_complexity Low_complexity 1 44 0 23 54 0 0 chr18 4136009 4136046 -82541502 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr18 4136238 4136259 -82541289 + AT_rich Low_complexity Low_complexity 1 21 0 1498 236 32 41 chr18 4136307 4136493 -82541055 + L1ME1 LINE L1 5636 5822 -344 2451 68 10 6 chr18 4136493 4136804 -82540744 + AluSx SINE Alu 1 312 0 1498 236 32 41 chr18 4136804 4137151 -82540397 + L1ME1 LINE L1 5822 6164 -2 363 314 85 58 chr18 4137270 4137308 -82540240 - L1M4 LINE L1 -891 5255 5219 1983 123 26 3 chr18 4137308 4137610 -82539938 - AluJb SINE Alu -3 309 1 363 314 85 58 chr18 4137610 4138017 -82539531 - L1M4 LINE L1 -927 5219 4798 2057 110 23 16 chr18 4138122 4138431 -82539117 - AluSx SINE Alu -1 311 1 2607 39 0 0 chr18 4138449 4138754 -82538794 - AluY SINE Alu -6 305 1 376 271 122 60 chr18 4138849 4139059 -82538489 - L1M4 LINE L1 -3650 2496 2256 2321 105 3 0 chr18 4139059 4139365 -82538183 - AluSx SINE Alu -5 307 1 376 271 122 60 chr18 4139365 4139490 -82538058 - L1M4 LINE L1 -3890 2256 2140 447 242 73 6 chr18 4139751 4139916 -82537632 - MER58B DNA MER1_type -19 322 147 1218 241 11 55 chr18 4139984 4140349 -82537199 - MLT2B1 LTR ERVL -171 349 1 685 99 9 36 chr18 4140414 4140525 -82537023 - Tigger5 DNA MER2_type 0 2323 2216 407 247 0 0 chr18 4140524 4140605 -82536943 - Tigger5 DNA MER2_type -2242 81 1 * 630 280 87 10 chr18 4140961 4141389 -82536159 - MLT1J LTR MaLR 0 511 16 3442 62 0 0 chr18 4141393 4141829 -82535719 - L1PA8 LINE L1 -2 6170 5735 13043 111 15 58 chr18 4141829 4142905 -82534643 - Tigger1 DNA MER2_type -208 2210 1286 2327 123 0 0 chr18 4142905 4143215 -82534333 + AluSx SINE Alu 1 310 -2 13043 111 15 58 chr18 4143215 4144446 -82533102 - Tigger1 DNA MER2_type -1132 1286 3 2337 90 0 0 chr18 4144544 4144844 -82532704 - AluSx SINE Alu -12 300 1 1626 156 63 33 chr18 4144917 4145219 -82532329 - AluJo SINE Alu -1 311 1 24 32 0 0 chr18 4147089 4147120 -82530428 + AT_rich Low_complexity Low_complexity 1 31 0 547 198 116 63 chr18 4147215 4147422 -82530126 + L1ME3 LINE L1 5944 6161 -1 234 273 47 102 chr18 4147863 4147991 -82529557 + MIR SINE MIR 30 150 -58 180 0 0 0 chr18 4148115 4148135 -82529413 + (A)n Simple_repeat Simple_repeat 1 20 0 812 277 67 44 chr18 4148285 4148474 -82529074 - L1MC4a LINE L1 -1882 5926 5743 2237 104 3 10 chr18 4148474 4148782 -82528766 - AluSx SINE Alu -6 306 1 812 277 67 44 chr18 4148782 4149043 -82528505 - L1MC4a LINE L1 -2065 5743 5466 2510 72 0 3 chr18 4149336 4149640 -82527908 - AluSg SINE Alu -7 303 1 1582 239 22 12 chr18 4150605 4150883 -82526665 + L1ME3A LINE L1 2 287 -6253 569 90 0 0 chr18 4150883 4150961 -82526587 - MADE1 DNA Mariner 0 80 3 1582 239 22 12 chr18 4150961 4151087 -82526461 + L1ME3A LINE L1 287 410 -6130 340 297 62 23 chr18 4151231 4151359 -82526189 + MIR SINE MIR 113 245 -17 774 82 9 9 chr18 4151776 4151886 -82525662 + FRAM SINE Alu 43 152 -24 845 240 48 10 chr18 4151998 4152290 -82525258 + L1ME3A LINE L1 4826 5128 -1412 783 197 48 0 chr18 4152290 4152478 -82525070 + L1ME3A LINE L1 6153 6349 -215 281 277 87 51 chr18 4152542 4152737 -82524811 + L1ME3A LINE L1 6357 6558 -6 1643 183 0 7 chr18 4152740 4153019 -82524529 - AluJb SINE Alu -11 301 25 381 268 120 12 chr18 4153479 4153726 -82523822 + MLT1F LTR MaLR 270 590 0 611 291 72 14 chr18 4153739 4153962 -82523586 - L2 LINE L2 -862 2452 2217 207 338 38 25 chr18 4154125 4154205 -82523343 + L2 LINE L2 3102 3182 -90 542 253 23 17 chr18 4155643 4155817 -82521731 - MER5B DNA MER1_type -3 175 1 211 286 44 111 chr18 4155834 4156086 -82521462 + L2 LINE L2 2954 3188 -84 356 174 61 25 chr18 4156413 4156558 -82520990 - MIR SINE MIR -29 233 120 215 227 133 40 chr18 4156609 4156625 -82520923 - MIR SINE MIR -133 129 116 1319 208 50 128 chr18 4156625 4157289 -82520259 + LTR9 LTR ERV1 1 612 0 215 227 133 40 chr18 4157289 4157347 -82520201 - MIR SINE MIR -146 116 48 195 152 30 0 chr18 4157332 4157365 -82520183 + MIR SINE MIR 49 82 -180 * 226 235 87 52 chr18 4157408 4157523 -82520025 - MLT1L LTR MaLR 0 615 497 2038 158 0 0 chr18 4158033 4158343 -82519205 - AluSx SINE Alu -2 310 1 26 30 0 0 chr18 4158417 4158450 -82519098 + AT_rich Low_complexity Low_complexity 1 33 0 282 168 84 54 chr18 4159559 4159707 -82517841 + LTR48 LTR ERV1 395 740 -47 2042 112 36 36 chr18 4159738 4160096 -82517452 - THE1B LTR MaLR -6 358 1 4621 184 32 47 chr18 4160281 4161420 -82516128 + MER31-int LTR ERV1 394 1515 -3421 23 68 0 0 chr18 4161485 4161529 -82516019 + AT_rich Low_complexity Low_complexity 1 44 0 292 204 21 11 chr18 4161540 4161633 -82515915 + MER31-int LTR ERV1 1593 1686 -3250 * 310 155 0 0 chr18 4161578 4161636 -82515912 + LTR57-int LTR ERVL 1368 1425 -3918 1712 160 3 7 chr18 4161648 4161954 -82515594 + AluJb SINE Alu 1 305 0 360 184 90 22 chr18 4161959 4162048 -82515500 + AluJ/FLAM SINE Alu 6 93 -209 1039 143 0 25 chr18 4162056 4162217 -82515331 + FRAM SINE Alu 1 40 0 380 313 9 0 chr18 4162890 4163002 -82514546 - MIR3 SINE MIR -7 201 89 906 234 77 22 chr18 4163414 4163636 -82513912 + MIR SINE MIR 12 245 -17 205 164 0 33 chr18 4163826 4163887 -82513661 + (TA)n Simple_repeat Simple_repeat 2 60 0 221 326 35 0 chr18 4163887 4163973 -82513575 - L2 LINE L2 0 3272 3184 1310 177 24 48 chr18 4163995 4164244 -82513304 + AluJo SINE Alu 1 243 -69 1041 205 67 24 chr18 4164244 4164541 -82513007 + L1ME2 LINE L1 5834 6143 -21 1707 187 146 51 chr18 4165625 4166117 -82511431 - MLT1F LTR MaLR -2 540 2 263 245 32 123 chr18 4166289 4166444 -82511104 - Charlie8 DNA MER1_type -2276 141 1 403 288 52 10 chr18 4166456 4166579 -82510969 - MIR SINE MIR -63 145 10 759 193 87 6 chr18 4166653 4166814 -82510734 - MER5B DNA MER1_type -1 177 4 1959 114 55 3 chr18 4167142 4167367 -82510181 + MER44D DNA MER2_type 17 229 -2262 1421 189 140 23 chr18 4167367 4167674 -82509874 + MER2 DNA MER2_type 2 344 0 1959 114 55 3 chr18 4167674 4167755 -82509793 + MER44D DNA MER2_type 229 609 0 208 206 0 0 chr18 4168097 4168131 -82509417 - MER91 DNA MER1_type -30 110 77 400 198 88 11 chr18 4168371 4168462 -82509086 + MIR SINE MIR 50 147 -115 610 373 129 11 chr18 4168588 4169309 -82508239 - L2 LINE L2 -354 2960 2155 185 240 240 8 chr18 4169651 4169772 -82507776 - L2 LINE L2 -1429 1885 1737 387 256 0 11 chr18 4170086 4170176 -82507372 + LTR16B LTR ERVL 372 460 -4 1649 180 10 14 chr18 4170261 4170550 -82506998 - AluJb SINE Alu -24 288 1 327 218 56 13 chr18 4171147 4171251 -82506297 - MER77 LTR ERV1 -13 592 517 250 238 16 48 chr18 4171264 4171327 -82506221 - MIR SINE MIR -171 91 31 657 148 123 33 chr18 4171501 4171623 -82505925 + FLAM_C SINE Alu 1 133 0 226 232 200 11 chr18 4171758 4171853 -82505695 - MIR SINE MIR -48 214 102 270 73 91 36 chr18 4171915 4171970 -82505578 + MIR SINE MIR 135 192 -70 240 254 18 0 chr18 4172030 4172085 -82505463 + MIR SINE MIR 207 262 0 889 144 0 15 chr18 4172162 4172294 -82505254 - FLAM_C SINE Alu -2 131 2 227 157 0 39 chr18 4172455 4172506 -82505042 + T-rich Low_complexity Low_complexity 2 50 0 315 229 46 9 chr18 4173619 4173728 -82503820 - L1MC4 LINE L1 -5 8037 7925 229 209 0 0 chr18 4173914 4173957 -82503591 + L2 LINE L2 3271 3313 0 3032 132 7 0 chr18 4174024 4174455 -82503093 - MER57B LTR ERV1 0 434 1 5092 123 26 9 chr18 4174473 4175245 -82502303 + L1MA3 LINE L1 5520 6304 -1 206 226 16 48 chr18 4175838 4175900 -82501648 + MIR SINE MIR 19 78 -184 * 230 280 53 27 chr18 4175893 4175968 -82501580 - MIR SINE MIR -107 101 25 1193 115 6 0 chr18 4176391 4176556 -82500992 + AluJb SINE Alu 1 166 -146 189 0 0 0 chr18 4176556 4176577 -82500971 + (A)n Simple_repeat Simple_repeat 1 21 0 22 70 0 0 chr18 4177851 4177894 -82499654 + AT_rich Low_complexity Low_complexity 1 43 0 329 327 145 14 chr18 4178213 4178427 -82499121 - MIR SINE MIR -15 247 6 258 271 315 24 chr18 4179169 4179420 -82498128 - L2 LINE L2 -21 3292 2969 329 281 115 0 chr18 4179533 4179672 -82497876 - L2 LINE L2 -600 2714 2560 2069 119 34 10 chr18 4180170 4180465 -82497083 - AluSx SINE Alu -10 302 1 422 288 56 0 chr18 4180465 4180590 -82496958 - MIR SINE MIR -96 166 35 210 263 120 90 chr18 4180671 4180804 -82496744 - MIR SINE MIR -75 187 51 28 29 0 0 chr18 4180980 4181015 -82496533 + AT_rich Low_complexity Low_complexity 1 35 0 289 145 32 0 chr18 4181538 4181600 -82495948 + CT-rich Low_complexity Low_complexity 1 64 0 194 276 17 0 chr18 4181600 4181658 -82495890 - L2 LINE L2 -1 3271 3213 188 296 0 0 chr18 4181769 4181813 -82495735 - MIR SINE MIR -108 154 111 1794 82 0 0 chr18 4181989 4182208 -82495340 - AluSg/x SINE Alu -16 294 76 2303 80 7 0 chr18 4184455 4184754 -82492794 + AluSp SINE Alu 1 301 -12 1758 129 198 69 chr18 4185769 4186148 -82491400 - MSTA LTR MaLR 0 428 1 271 299 58 22 chr18 4186374 4186511 -82491037 - L2 LINE L2 -833 2481 2340 7067 129 8 14 chr18 4186526 4187468 -82490080 - L1MA3 LINE L1 0 6305 5366 2264 120 0 0 chr18 4187468 4187769 -82489779 - AluSx SINE Alu -11 301 1 7067 129 8 14 chr18 4187769 4188319 -82489229 - L1MA3 LINE L1 -939 5366 4814 2268 88 0 19 chr18 4188319 4188627 -82488921 - AluSx SINE Alu -10 302 1 2163 133 0 0 chr18 4189297 4189606 -82487942 - AluSx SINE Alu -3 309 1 2128 95 21 0 chr18 4189609 4189892 -82487656 - AluSx SINE Alu -23 289 1 865 184 0 13 chr18 4190402 4190554 -82486994 + FRAM SINE Alu 1 150 -26 2168 84 3 20 chr18 4190931 4191229 -82486319 + AluSx SINE Alu 1 293 -19 2075 109 6 48 chr18 4191700 4191863 -82485685 - AluSx SINE Alu -14 298 153 2347 103 3 0 chr18 4191863 4192174 -82485374 - AluSp SINE Alu -1 312 1 2075 109 6 48 chr18 4192174 4192321 -82485227 - AluSx SINE Alu -159 153 1 849 142 0 37 chr18 4192508 4192670 -82484878 - L1MB3 LINE L1 0 6183 6028 434 222 0 0 chr18 4192670 4192751 -82484797 + AluJ/FRAM SINE Alu 214 294 -18 298 237 0 0 chr18 4192752 4192828 -82484720 - L1MB4 LINE L1 -147 6033 5958 809 158 14 0 chr18 4192862 4193001 -82484547 - L1MB4 LINE L1 -225 5955 5815 2256 194 35 75 chr18 4193012 4193055 -82484493 - L1MC4 LINE L1 0 8042 7999 2019 140 0 19 chr18 4193055 4193370 -82484178 + AluSx SINE Alu 1 309 -3 2402 81 3 0 chr18 4193370 4193680 -82483868 + AluSp SINE Alu 1 311 -2 2256 194 35 75 chr18 4193680 4194273 -82483275 - L1MC4 LINE L1 -41 8001 7431 2695 30 0 0 chr18 4194284 4194585 -82482963 - AluY SINE Alu -10 301 1 1227 170 90 86 chr18 4194607 4194778 -82482770 + LTR49-int LTR ERV1 1679 1848 -3088 1891 179 3 0 chr18 4194778 4195085 -82482463 - AluJb SINE Alu -4 308 1 1227 170 90 86 chr18 4195085 4195378 -82482170 + LTR49-int LTR ERV1 1848 2145 -2791 1940 157 13 0 chr18 4195390 4195690 -82481858 + AluJo SINE Alu 1 304 -8 301 161 0 36 chr18 4195692 4195748 -82481800 + LTR49-int LTR ERV1 3809 3862 -2469 * 875 187 70 97 chr18 4195715 4196014 -82481534 + LTR49-int LTR ERV1 2412 2702 -2234 367 276 0 0 chr18 4196014 4196089 -82481459 + Tigger5 DNA MER2_type 4 78 -2245 440 129 0 43 chr18 4196089 4196159 -82481389 - Tigger5 DNA MER2_type -3 2320 2254 6025 191 34 91 chr18 4196162 4197369 -82480179 + LTR49-int LTR ERV1 2704 3797 -1139 1056 163 0 6 chr18 4197369 4197541 -82480007 - L1PA16 LINE L1 -6 6160 5990 6025 191 34 91 chr18 4197541 4197967 -82479581 + LTR49-int LTR ERV1 3797 4245 -691 233 218 149 11 chr18 4197976 4198063 -82479485 + LTR37A LTR ERV1 4 102 -324 373 230 70 10 chr18 4198115 4198215 -82479333 + LTR49-int LTR ERV1 4364 4469 -467 420 207 16 37 chr18 4198258 4198360 -82479188 + LTR49-int LTR ERV1 3787 4542 -394 623 196 33 82 chr18 4198444 4198628 -82478920 + LTR49-int LTR ERV1 4575 4749 -187 288 193 100 59 chr18 4199088 4199117 -82478431 + MER34 LTR ERV1 357 383 -159 2696 82 22 3 chr18 4199117 4199473 -82478075 + L1PA13 LINE L1 5801 6163 0 288 193 100 59 chr18 4199473 4199637 -82477911 + MER34 LTR ERV1 383 536 -6 2085 164 3 63 chr18 4199637 4199700 -82477848 - MLT1A1 LTR MaLR -2 363 298 2041 127 7 7 chr18 4199700 4200007 -82477541 - AluSq SINE Alu -6 307 1 2085 164 3 63 chr18 4200007 4200326 -82477222 - MLT1A1 LTR MaLR -67 298 4 352 270 108 0 chr18 4200416 4200527 -82477021 - MER94 DNA DNA -1 133 11 1595 229 146 49 chr18 4200550 4201232 -82476316 + L2 LINE L2 2329 2943 -370 369 93 0 0 chr18 4201232 4201286 -82476262 + (CA)n Simple_repeat Simple_repeat 2 55 0 1254 300 76 5 chr18 4201288 4201708 -82475840 - LTR16A LTR ERVL 0 450 1 1595 229 146 49 chr18 4201708 4201731 -82475817 + L2 LINE L2 2943 3093 -220 501 328 47 10 chr18 4202150 4202342 -82475206 + MIR3 SINE MIR 3 201 -7 2327 103 0 3 chr18 4202483 4202794 -82474754 + AluSq SINE Alu 1 310 -3 240 100 0 0 chr18 4203221 4203261 -82474287 + (TCTA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr18 4203331 4203352 -82474196 + AT_rich Low_complexity Low_complexity 1 21 0 1460 187 123 0 chr18 4204960 4205228 -82472320 + AluJb SINE Alu 1 301 -1 225 314 59 10 chr18 4205773 4205875 -82471673 - MIR SINE MIR -64 198 92 359 271 151 0 chr18 4205914 4206067 -82471481 - MIR SINE MIR -48 214 38 615 182 277 0 chr18 4206594 4206742 -82470806 + MER53 DNA DNA 1 189 0 2123 135 0 0 chr18 4206922 4207234 -82470314 + AluSx SINE Alu 1 312 0 1358 171 54 46 chr18 4207325 4207605 -82469943 + AluJo SINE Alu 1 282 -30 1265 168 38 102 chr18 4207606 4207776 -82469772 - AluSx SINE Alu -6 296 154 194 0 39 0 chr18 4207776 4207802 -82469746 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1265 168 38 102 chr18 4207802 4207946 -82469602 - AluSx SINE Alu -148 154 2 1387 82 22 0 chr18 4207991 4208175 -82469373 - AluY SINE Alu -123 188 1 823 181 0 0 chr18 4208178 4208311 -82469237 - AluJo/FLAM SINE Alu -169 133 1 180 258 164 47 chr18 4208740 4208868 -82468680 + MIR3 SINE MIR 65 207 -1 1523 173 24 3 chr18 4209006 4209301 -82468247 + AluJb SINE Alu 1 301 -11 23 33 0 0 chr18 4209336 4209366 -82468182 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr18 4210051 4210080 -82467468 + AT_rich Low_complexity Low_complexity 1 29 0 1683 185 3 16 chr18 4210081 4210384 -82467164 + AluJo SINE Alu 1 299 -13 189 121 0 0 chr18 4210561 4210594 -82466954 + (T)n Simple_repeat Simple_repeat 1 33 0 299 189 0 27 chr18 4211319 4211393 -82466155 + CT-rich Low_complexity Low_complexity 4 75 0 1173 162 28 86 chr18 4211497 4211561 -82465987 - MER33 DNA MER1_type -2261 324 258 2023 127 0 0 chr18 4211561 4211873 -82465675 - AluSx SINE Alu 0 314 3 1173 162 28 86 chr18 4211873 4212096 -82465452 - MER33 DNA MER1_type -2327 258 52 478 185 22 0 chr18 4212115 4212207 -82465341 - L1MA6 LINE L1 0 6300 6207 388 203 0 0 chr18 4212213 4212282 -82465266 - MER3 DNA MER1_type -100 109 41 400 285 201 0 chr18 4212304 4212448 -82465100 + MLT1J LTR MaLR 1 173 -338 316 281 96 27 chr18 4212626 4212772 -82464776 + MLT1J LTR MaLR 356 511 0 2104 130 7 0 chr18 4213177 4213476 -82464072 - AluSg SINE Alu -9 301 1 1555 179 40 14 chr18 4213532 4213829 -82463719 + AluJb SINE Alu 1 305 -7 4568 174 69 38 chr18 4213972 4215634 -82461914 + L1MA9 LINE L1 4556 6245 -67 1180 177 5 5 chr18 4215642 4215840 -82461708 + AluJo SINE Alu 1 198 -114 998 173 16 38 chr18 4215839 4216024 -82461524 + AluJo SINE Alu 112 292 -20 * 24 0 0 0 chr18 4216154 4216178 -82461370 + AT_rich Low_complexity Low_complexity 1 24 0 651 365 75 27 chr18 4216327 4216768 -82460780 - L3 LINE CR1 -1073 504 43 1453 233 158 29 chr18 4217781 4217816 -82459732 - MLT2B2 LTR ERVL 0 515 486 230 81 27 0 chr18 4217816 4217853 -82459695 + (TAGA)n Simple_repeat Simple_repeat 4 41 0 1453 233 158 29 chr18 4217853 4218272 -82459276 - MLT2B2 LTR ERVL -29 486 2 595 260 13 0 chr18 4218380 4218534 -82459014 + MER53 DNA DNA 8 163 -26 1768 122 15 0 chr18 4219364 4219635 -82457913 + AluSx SINE Alu 15 289 -23 394 270 40 8 chr18 4219803 4219929 -82457619 + HAL1 LINE L1 15 144 -2363 823 277 62 65 chr18 4220150 4220603 -82456945 + HAL1 LINE L1 602 1055 -1452 2348 83 7 10 chr18 4220603 4220904 -82456644 - AluSq SINE Alu -12 301 2 823 277 62 65 chr18 4220904 4220930 -82456618 + HAL1 LINE L1 1055 1080 -1427 248 254 0 0 chr18 4220935 4220994 -82456554 - HsTC2 DNA Tc2 -14 1884 1826 452 166 20 19 chr18 4220994 4221241 -82456307 + AluJo SINE Alu 1 310 -2 830 273 72 25 chr18 4221244 4221607 -82455941 - HsTC2 DNA Tc2 -69 1829 1274 1020 254 17 0 chr18 4221617 4221857 -82455691 - HsTC2 DNA Tc2 -1158 740 497 529 279 121 5 chr18 4221857 4222047 -82455501 - HsTC2 DNA Tc2 -1680 218 7 2340 107 3 0 chr18 4222072 4222381 -82455167 + AluSg SINE Alu 1 310 0 3162 249 69 49 chr18 4222393 4222626 -82454922 + HAL1 LINE L1 1098 1325 -1182 1755 169 19 16 chr18 4222626 4222933 -82454615 + AluJo SINE Alu 1 308 -4 3162 249 69 49 chr18 4222933 4223046 -82454502 + HAL1 LINE L1 1325 1434 -1073 1353 183 107 31 chr18 4223046 4223336 -82454212 + AluJo SINE Alu 1 312 0 3162 249 69 49 chr18 4223336 4224240 -82453308 + HAL1 LINE L1 1434 2381 -126 1242 186 113 76 chr18 4224240 4224572 -82452976 + MSTD LTR MaLR 1 350 -46 2500 83 3 0 chr18 4224572 4224874 -82452674 + AluSp SINE Alu 1 303 -10 1242 186 113 76 chr18 4224874 4224923 -82452625 + MSTD LTR MaLR 350 396 0 3162 249 69 49 chr18 4224923 4225036 -82452512 + HAL1 LINE L1 2381 2490 -17 254 306 0 27 chr18 4225120 4225231 -82452317 + MIR SINE MIR 96 203 -59 1586 173 121 15 chr18 4225603 4225933 -82451615 - MLT1A1 LTR MaLR 0 365 1 719 198 60 0 chr18 4225939 4226106 -82451442 + L1MD3 LINE L1 7809 7985 -10 246 275 180 48 chr18 4226737 4226904 -82450644 - MER5A DNA MER1_type 0 189 1 2138 89 20 27 chr18 4226951 4227244 -82450304 + AluSx SINE Alu 1 291 -21 2301 141 97 5 chr18 4227248 4227638 -82449910 + MSTB LTR MaLR 1 426 0 1012 83 19 0 chr18 4227649 4227805 -82449743 + (GAAA)n Simple_repeat Simple_repeat 2 160 0 904 142 116 7 chr18 4227865 4228020 -82449528 + AluJo SINE Alu 6 177 -135 468 190 0 60 chr18 4228079 4228195 -82449353 - MLT1I LTR MaLR -292 117 9 688 190 0 0 chr18 4228232 4228353 -82449195 + AluJb SINE Alu 190 310 -2 187 250 0 0 chr18 4228918 4228966 -82448582 + L2 LINE L2 3262 3309 -4 777 181 83 152 chr18 4229115 4229463 -82448085 - MER33 DNA MER1_type 0 324 1 269 235 88 0 chr18 4229491 4229559 -82447989 + MIR SINE MIR 118 191 -71 449 229 0 53 chr18 4229729 4229860 -82447688 - MLT1I LTR MaLR -277 132 9 2379 62 0 36 chr18 4229906 4230213 -82447335 + AluY SINE Alu 1 296 -15 734 125 7 90 chr18 4230380 4230524 -82447024 - FLAM_C SINE Alu -1 132 1 210 266 47 0 chr18 4230682 4230746 -82446802 - L2 LINE L2 -49 3264 3198 346 225 175 0 chr18 4231198 4231318 -82446230 + MIR SINE MIR 121 261 -1 2455 163 39 0 chr18 4231475 4231885 -82445663 - MSTB LTR MaLR 0 426 1 333 0 0 0 chr18 4232505 4232542 -82445006 + (TG)n Simple_repeat Simple_repeat 1 37 0 26 0 0 0 chr18 4233331 4233357 -82444191 + AT_rich Low_complexity Low_complexity 1 26 0 1230 73 61 0 chr18 4233645 4233810 -82443738 + AluSg/x SINE Alu 134 308 -4 1319 225 111 70 chr18 4234279 4234357 -82443191 - MLT1D LTR MaLR 0 505 432 1655 172 8 0 chr18 4234357 4234624 -82442924 + AluJb SINE Alu 12 280 -32 1319 225 111 70 chr18 4234624 4235030 -82442518 - MLT1D LTR MaLR -73 432 1 2240 81 3 3 chr18 4235070 4235381 -82442167 - AluSx SINE Alu 0 311 1 2490 76 3 0 chr18 4235605 4235906 -82441642 - AluSp SINE Alu -11 302 1 318 286 11 11 chr18 4236490 4236581 -82440967 + L2 LINE L2 3182 3272 0 735 221 0 35 chr18 4236618 4236790 -82440758 - FRAM SINE Alu 0 166 1 2200 54 10 34 chr18 4236815 4237109 -82440439 + AluY SINE Alu 13 299 -12 677 234 29 35 chr18 4237124 4237295 -82440253 - MIR SINE MIR -46 216 47 2134 125 3 0 chr18 4237338 4237642 -82439906 - AluSx SINE Alu -7 305 1 188 315 18 63 chr18 4237684 4237795 -82439753 + MIR SINE MIR 154 259 -3 434 99 28 14 chr18 4238124 4238195 -82439353 + L1MB3 LINE L1 6081 6152 -31 21 71 0 0 chr18 4238492 4238534 -82439014 + AT_rich Low_complexity Low_complexity 1 42 0 1870 126 36 0 chr18 4238586 4238864 -82438684 + AluSx SINE Alu 1 288 -24 1825 185 0 10 chr18 4239119 4239427 -82438121 - AluJo SINE Alu -7 305 1 985 165 18 6 chr18 4239567 4239737 -82437811 + AluSg/x SINE Alu 130 301 -8 2182 230 119 68 chr18 4239885 4240046 -82437502 + L1MC4 LINE L1 6786 6937 -1105 1334 185 46 46 chr18 4240046 4240348 -82437200 + AluJo SINE Alu 1 302 -10 2182 230 119 68 chr18 4240348 4241178 -82436370 + L1MC4 LINE L1 6937 7827 -215 1215 52 0 0 chr18 4241228 4241382 -82436166 - L1PA4 LINE L1 -2 6153 6000 2116 168 38 18 chr18 4241531 4241974 -82435574 - LTR56 LTR ERV1 0 437 10 1312 186 42 52 chr18 4241975 4242281 -82435267 + AluJo SINE Alu 1 303 -9 2163 116 0 0 chr18 4242286 4242579 -82434969 - AluSc SINE Alu -16 293 1 2306 174 16 0 chr18 4242863 4243249 -82434299 - MER57A LTR ERV1 -11 392 1 252 118 15 29 chr18 4243390 4243403 -82434145 + (TA)n Simple_repeat Simple_repeat 2 14 -54 2114 99 7 7 chr18 4243403 4243685 -82433863 + AluSp SINE Alu 5 286 -27 252 118 15 29 chr18 4243685 4243739 -82433809 + (TA)n Simple_repeat Simple_repeat 14 68 0 211 70 23 23 chr18 4243767 4243810 -82433738 + (TA)n Simple_repeat Simple_repeat 2 44 0 211 70 23 23 chr18 4243838 4243881 -82433667 + (TA)n Simple_repeat Simple_repeat 1 43 0 1151 161 177 24 chr18 4243881 4244129 -82433419 - Tigger3(Golem) DNA MER2_type -2743 286 1 1042 256 16 3 chr18 4244388 4244693 -82432855 - L1MEc LINE L1 -3935 2461 2153 2025 131 0 17 chr18 4244718 4245015 -82432533 - AluSx SINE Alu -20 292 1 2327 119 0 0 chr18 4245075 4245387 -82432161 - AluSx SINE Alu 0 312 1 877 184 0 13 chr18 4245769 4245921 -82431627 + FRAM SINE Alu 1 150 -26 1996 112 7 0 chr18 4246298 4246575 -82430973 + AluSp SINE Alu 1 279 -34 657 78 0 11 chr18 4246798 4246888 -82430660 + AluY SINE Alu 2 90 -221 1842 118 0 27 chr18 4246988 4247250 -82430298 - AluSp SINE Alu -58 255 1 778 171 8 0 chr18 4247365 4247494 -82430054 + FLAM_A SINE Alu 1 130 -3 2197 134 0 3 chr18 4248614 4248927 -82428621 + AluSq SINE Alu 1 312 -1 39 15 0 46 chr18 4250106 4250171 -82427377 + AT_rich Low_complexity Low_complexity 1 62 0 1245 171 167 0 chr18 4250401 4250653 -82426895 - L1PB3 LINE L1 0 6154 5861 186 43 0 0 chr18 4250814 4250837 -82426711 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2331 100 3 0 chr18 4250857 4251158 -82426390 - AluSg SINE Alu -8 302 1 2037 136 13 7 chr18 4251168 4251476 -82426072 - AluSq SINE Alu -3 310 1 1168 56 17 17 chr18 4251486 4251666 -82425882 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2323 106 0 6 chr18 4251680 4251992 -82425556 - AluSg SINE Alu 0 310 1 284 151 86 178 chr18 4251995 4252147 -82425401 - HAL1 LINE L1 -261 2246 2109 1640 137 33 68 chr18 4252152 4252248 -82425300 + MLT1B LTR MaLR 1 99 -291 2331 89 0 0 chr18 4252248 4252573 -82424975 - AluSg SINE Alu 0 325 1 1912 153 3 10 chr18 4252579 4252887 -82424661 - AluJo SINE Alu -6 306 1 1640 137 33 68 chr18 4252887 4253089 -82424459 + MLT1B LTR MaLR 104 296 -94 189 0 0 0 chr18 4253096 4253117 -82424431 + (T)n Simple_repeat Simple_repeat 1 21 0 26 0 0 0 chr18 4253139 4253165 -82424383 + GC_rich Low_complexity Low_complexity 1 26 0 2071 115 0 14 chr18 4253736 4254024 -82423524 - AluJb SINE Alu -28 284 1 28 0 0 0 chr18 4254031 4254059 -82423489 + AT_rich Low_complexity Low_complexity 1 28 0 2140 131 0 3 chr18 4256622 4256920 -82420628 + AluSx SINE Alu 3 299 -13 1825 154 3 7 chr18 4257191 4257489 -82420059 - AluSg SINE Alu -13 297 1 371 251 74 0 chr18 4258017 4258143 -82419405 + MIR SINE MIR 13 143 -65 2269 102 0 7 chr18 4258163 4258458 -82419090 + AluSg SINE Alu 1 293 -17 2538 183 62 49 chr18 4258458 4258644 -82418904 - L1MCa LINE L1 -3189 3237 3055 1636 122 0 0 chr18 4258644 4258866 -82418682 + AluSq SINE Alu 77 298 -15 2538 183 62 49 chr18 4258866 4259161 -82418387 - L1MCa LINE L1 -3371 3055 2765 1958 124 37 0 chr18 4259161 4259457 -82418091 - AluSx SINE Alu 0 306 1 2538 183 62 49 chr18 4259457 4259790 -82417758 - L1MCa LINE L1 -3661 2765 2438 3689 93 14 0 chr18 4259790 4260297 -82417251 + MER75 DNA T2_type 1 514 0 2538 183 62 49 chr18 4260297 4260549 -82416999 - L1MCa LINE L1 -3988 2438 2191 2272 98 10 0 chr18 4260549 4260844 -82416704 - AluSg SINE Alu -12 298 1 2538 183 62 49 chr18 4260844 4261061 -82416487 - L1MCa LINE L1 -4235 2191 1934 2357 92 0 0 chr18 4261062 4261357 -82416191 + AluSg SINE Alu 1 295 -15 553 236 26 77 chr18 4261537 4261732 -82415816 + MIR SINE MIR 70 254 -8 311 285 13 60 chr18 4262284 4262435 -82415113 - LTR33A LTR ERVL -3 520 377 2190 115 7 0 chr18 4262557 4262852 -82414696 + AluSq SINE Alu 1 297 -16 2491 68 0 3 chr18 4262852 4263146 -82414402 + AluSp SINE Alu 1 293 -20 2353 60 3 3 chr18 4263246 4263531 -82414017 - AluY SINE Alu -25 286 2 1051 90 7 7 chr18 4263534 4263679 -82413869 + Tigger1 DNA MER2_type 1950 2094 -324 879 138 8 0 chr18 4263679 4263809 -82413739 + FLAM_C SINE Alu 1 131 -12 2114 108 63 18 chr18 4263822 4264155 -82413393 + Tigger1 DNA MER2_type 2071 2418 0 1244 98 0 6 chr18 4264450 4264613 -82412935 + AluSg/x SINE Alu 135 296 -14 653 219 126 0 chr18 4265275 4265426 -82412122 + FAM SINE Alu 1 170 -5 2385 136 20 17 chr18 4265452 4265858 -82411690 + L1MB1 LINE L1 5762 6168 0 810 127 0 0 chr18 4266993 4267103 -82410445 + FLAM_C SINE Alu 1 110 -33 498 276 126 0 chr18 4268358 4268572 -82408976 - MIR SINE MIR -1 261 21 23 0 0 0 chr18 4270316 4270339 -82407209 + AT_rich Low_complexity Low_complexity 1 23 0 2157 133 0 7 chr18 4270683 4270991 -82406557 + AluSx SINE Alu 1 306 -6 4335 196 59 81 chr18 4270993 4271320 -82406228 - Charlie1a DNA MER1_type -1420 1341 1008 1970 129 10 7 chr18 4271320 4271615 -82405933 - AluSx SINE Alu -16 296 1 4335 196 59 81 chr18 4271615 4272138 -82405410 - Charlie1a DNA MER1_type -1753 1008 475 1496 161 57 25 chr18 4272138 4272418 -82405130 + AluJo SINE Alu 1 289 -23 1773 115 3 61 chr18 4272421 4272734 -82404814 - AluSx SINE Alu -17 295 1 4335 196 59 81 chr18 4272734 4272746 -82404802 - Charlie1a DNA MER1_type -2288 473 462 2031 125 3 20 chr18 4272746 4273041 -82404507 - AluSc SINE Alu -19 290 1 4335 196 59 81 chr18 4273041 4273541 -82404007 - Charlie1a DNA MER1_type -2299 462 3 2138 134 0 0 chr18 4273594 4273893 -82403655 + AluSx SINE Alu 1 299 -13 1955 132 7 4 chr18 4273905 4274186 -82403362 + AluSx SINE Alu 4 285 -27 2071 115 0 14 chr18 4274978 4275266 -82402282 - AluJb SINE Alu -28 284 1 27 0 0 0 chr18 4275273 4275300 -82402248 + AT_rich Low_complexity Low_complexity 1 27 0 2137 131 0 3 chr18 4277846 4278144 -82399404 + AluSx SINE Alu 3 299 -13 1825 154 3 7 chr18 4278415 4278713 -82398835 - AluSg SINE Alu -13 297 1 371 251 74 0 chr18 4279258 4279384 -82398164 + MIR SINE MIR 13 143 -65 2228 106 0 7 chr18 4279404 4279707 -82397841 + AluSg SINE Alu 1 301 -9 1982 135 3 3 chr18 4279777 4280074 -82397474 + AluSx SINE Alu 1 297 -15 2403 68 0 14 chr18 4280111 4280406 -82397142 - AluY SINE Alu -20 291 1 275 300 77 39 chr18 4280571 4280719 -82396829 + L2 LINE L2 2948 3110 -203 957 177 13 78 chr18 4280719 4280951 -82396597 - MER20 DNA MER1_type 0 219 3 275 300 77 39 chr18 4280951 4281035 -82396513 + L2 LINE L2 3110 3189 -124 42 57 0 0 chr18 4281063 4281133 -82396415 + AT_rich Low_complexity Low_complexity 1 70 0 524 135 0 0 chr18 4281140 4281229 -82396319 + AluS SINE Alu 224 312 0 210 286 71 0 chr18 4281242 4281298 -82396250 + L2 LINE L2 3252 3311 -2 1437 77 72 0 chr18 4281314 4281535 -82396013 + L1PA14 LINE L1 5922 6158 -3 221 244 0 0 chr18 4281980 4282025 -82395523 + (CCA)n Simple_repeat Simple_repeat 3 47 0 25 31 0 0 chr18 4282263 4282295 -82395253 + AT_rich Low_complexity Low_complexity 1 32 0 195 42 0 0 chr18 4283439 4283463 -82394085 + (TCC)n Simple_repeat Simple_repeat 3 26 0 2194 113 3 0 chr18 4284450 4284741 -82392807 + AluSp SINE Alu 1 292 -21 476 151 0 0 chr18 4284742 4284815 -82392733 - L1MB3 LINE L1 -39 6144 6072 24 0 0 0 chr18 4284896 4284920 -82392628 + AT_rich Low_complexity Low_complexity 1 24 0 462 280 83 0 chr18 4285087 4285244 -82392304 - MIR SINE MIR -45 217 48 2001 139 3 0 chr18 4285306 4285593 -82391955 + AluSx SINE Alu 1 288 -24 338 272 0 22 chr18 4285596 4285688 -82391860 - L1MC4 LINE L1 -1339 6703 6614 204 83 56 0 chr18 4285688 4285724 -82391824 + (TCTA)n Simple_repeat Simple_repeat 2 39 0 333 275 0 11 chr18 4285724 4285781 -82391767 - L1MC4 LINE L1 -1339 6703 6646 960 111 0 0 chr18 4285781 4285961 -82391587 + (TA)n Simple_repeat Simple_repeat 1 180 0 333 275 0 11 chr18 4285961 4285994 -82391554 - L1MC4 LINE L1 -1396 6646 6614 2101 81 68 14 chr18 4286156 4286451 -82391097 + AluSq SINE Alu 1 311 -2 1317 153 0 28 chr18 4286557 4286773 -82390775 + AluJo SINE Alu 89 298 -14 2346 83 10 0 chr18 4286776 4287077 -82390471 + AluSc SINE Alu 1 304 -5 1817 112 93 4 chr18 4287620 4287888 -82389660 + AluSx SINE Alu 2 293 -19 2177 87 4 4 chr18 4288298 4288575 -82388973 + AluSq SINE Alu 1 277 -36 2408 87 3 0 chr18 4288575 4288884 -82388664 + AluSp SINE Alu 1 310 -3 2275 99 3 10 chr18 4288894 4289198 -82388350 + AluSg SINE Alu 1 302 -8 1189 183 167 0 chr18 4289402 4289654 -82387894 + L1PB3 LINE L1 5861 6154 0 39 15 0 46 chr18 4289888 4289953 -82387595 + AT_rich Low_complexity Low_complexity 1 62 0 2328 91 0 25 chr18 4291131 4291449 -82386099 - AluSg SINE Alu 0 310 1 258 333 63 0 chr18 4291666 4291777 -82385771 + MIR3 SINE MIR 77 194 -14 1954 125 0 60 chr18 4292019 4292338 -82385210 + AluSx SINE Alu 1 300 -12 1999 90 4 19 chr18 4292738 4293006 -82384542 - AluSp SINE Alu -49 264 1 2468 84 0 3 chr18 4293020 4293330 -82384218 - AluY SINE Alu -2 309 1 378 0 0 0 chr18 4293642 4293684 -82383864 + (CA)n Simple_repeat Simple_repeat 2 43 0 2008 130 0 11 chr18 4293766 4294050 -82383498 + AluSx SINE Alu 2 282 -30 1444 115 12 136 chr18 4294533 4294871 -82382677 - AluJb SINE Alu -4 298 3 806 156 0 25 chr18 4295452 4295612 -82381936 - L1MB3 LINE L1 0 6183 6028 414 226 0 0 chr18 4295612 4295696 -82381852 + AluJ/FRAM SINE Alu 214 297 -5 293 233 0 0 chr18 4295697 4295770 -82381778 - L1MB4 LINE L1 -150 6030 5958 799 158 14 0 chr18 4295804 4295943 -82381605 - L1MB4 LINE L1 -225 5955 5815 1985 147 0 19 chr18 4295997 4296310 -82381238 + AluSx SINE Alu 1 307 -5 2181 90 3 3 chr18 4296314 4296602 -82380946 + AluSp SINE Alu 1 288 -25 2145 196 39 63 chr18 4296621 4297219 -82380329 - L1MC4 LINE L1 -29 8013 7431 1799 177 0 29 chr18 4298357 4298667 -82378881 - AluJb SINE Alu -11 301 1 2528 65 0 10 chr18 4299446 4299753 -82377795 + AluY SINE Alu 1 304 -7 438 199 243 66 chr18 4299753 4299970 -82377578 + L1MC4a LINE L1 5322 5582 -2226 653 260 122 58 chr18 4300015 4300376 -82377172 + MLT1I LTR MaLR 11 394 -15 969 253 57 48 chr18 4300388 4300469 -82377079 + L1MC4a LINE L1 5613 5692 -2116 2321 77 0 7 chr18 4300469 4300784 -82376764 - AluSq SINE Alu 0 313 1 969 253 57 48 chr18 4300784 4301072 -82376476 + L1MC4a LINE L1 5692 5986 -1822 1398 129 33 0 chr18 4301168 4301378 -82376170 - AluJb SINE Alu -10 302 86 30 59 0 0 chr18 4301404 4301455 -82376093 + AT_rich Low_complexity Low_complexity 1 51 0 1817 161 38 0 chr18 4302185 4302476 -82375072 + AluJo SINE Alu 1 302 -10 23 33 0 0 chr18 4302631 4302661 -82374887 + AT_rich Low_complexity Low_complexity 1 30 0 2385 60 0 3 chr18 4302714 4303020 -82374528 + AluY SINE Alu 1 305 0 1980 112 7 24 chr18 4303040 4303350 -82374198 + AluSq SINE Alu 3 307 0 22 0 0 0 chr18 4303401 4303423 -82374125 + AT_rich Low_complexity Low_complexity 1 22 0 419 253 54 83 chr18 4303462 4303542 -82374006 - MIR SINE MIR -3 259 178 2252 105 3 0 chr18 4303542 4303836 -82373712 - AluSx SINE Alu -17 295 1 419 253 54 83 chr18 4303836 4304004 -82373544 - MIR SINE MIR -84 178 21 182 350 114 0 chr18 4305598 4305721 -82371827 - MIR SINE MIR -20 242 106 2059 141 3 3 chr18 4306108 4306412 -82371136 - AluSx SINE Alu -6 306 3 537 170 0 0 chr18 4306454 4306554 -82370994 + FLAM_A SINE Alu 42 141 -1 2141 107 7 0 chr18 4306857 4307146 -82370402 + AluSg SINE Alu 1 291 -19 2272 110 0 0 chr18 4307149 4307457 -82370091 + AluSc SINE Alu 1 308 -1 1570 114 20 143 chr18 4307582 4307761 -82369787 + AluYb8 SINE Alu 2 119 -189 2299 77 13 7 chr18 4307761 4308084 -82369464 + AluSx SINE Alu 1 312 0 1570 114 20 143 chr18 4308084 4308254 -82369294 + AluYb8 SINE Alu 119 308 0 1681 153 3 52 chr18 4308405 4308713 -82368835 - AluJo SINE Alu -19 293 1 2404 45 0 51 chr18 4312806 4313117 -82364431 - AluY SINE Alu -16 295 1 191 279 0 76 chr18 4313173 4313252 -82364296 + L2 LINE L2 3241 3313 0 684 266 105 4 chr18 4313884 4314113 -82363435 - MIR SINE MIR -7 255 4 27 62 0 0 chr18 4314238 4314286 -82363262 + AT_rich Low_complexity Low_complexity 1 48 0 2096 91 40 0 chr18 4314329 4314605 -82362943 + AluSp SINE Alu 1 287 -26 206 240 0 0 chr18 4316072 4316122 -82361426 + MIR SINE MIR 72 121 -141 1294 69 0 13 chr18 4317668 4317827 -82359721 + L1PA10 LINE L1 5999 6155 -13 456 290 74 11 chr18 4317869 4318045 -82359503 - MIR SINE MIR -29 233 47 203 59 0 29 chr18 4319179 4319213 -82358335 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 299 256 33 22 chr18 4319472 4319562 -82357986 + L3b LINE CR1 1315 1405 -178 297 301 0 21 chr18 4320213 4320306 -82357242 + MIR SINE MIR 168 258 -4 184 325 241 0 chr18 4320331 4320414 -82357134 - L2 LINE L2 -29 3243 3141 1653 135 38 0 chr18 4321140 4321377 -82356171 + AluSx SINE Alu 1 246 -66 20606 23 0 1 chr18 4322008 4325066 -82352482 - L1PA3 LINE L1 0 6155 3100 23 68 0 0 chr18 4325434 4325478 -82352070 + AT_rich Low_complexity Low_complexity 1 44 0 238 132 38 0 chr18 4325793 4325846 -82351702 + (TG)n Simple_repeat Simple_repeat 2 56 0 295 287 96 11 chr18 4325854 4325948 -82351600 - MIR SINE MIR -73 135 34 478 214 39 79 chr18 4326215 4326275 -82351273 - MIR SINE MIR 0 262 201 2068 122 0 20 chr18 4326275 4326570 -82350978 + AluSg SINE Alu 1 289 -21 478 214 39 79 chr18 4326570 4326687 -82350861 - MIR SINE MIR -61 201 92 233 275 53 38 chr18 4327196 4327327 -82350221 + L1ME3A LINE L1 5478 5610 -552 980 151 0 0 chr18 4327381 4327527 -82350021 + FRAM SINE Alu 1 146 -30 258 32 0 0 chr18 4327529 4327560 -82349988 + (GA)n Simple_repeat Simple_repeat 2 32 0 757 295 58 74 chr18 4327578 4328130 -82349418 + HAL1b LINE L1 98 640 -708 513 129 0 35 chr18 4328149 4328234 -82349314 - Tigger5 DNA MER2_type 0 2323 2242 * 1255 209 67 39 chr18 4328216 4328499 -82349049 - Tigger5 DNA MER2_type -2013 310 20 243 281 74 25 chr18 4328501 4328622 -82348926 + HAL1b LINE L1 691 817 -531 2580 213 58 60 chr18 4328873 4329686 -82347862 + L1MC5 LINE L1 6633 7443 -518 424 255 42 61 chr18 4329841 4330053 -82347495 + L1ME3A LINE L1 5962 6169 -1 1529 173 53 7 chr18 4330089 4330373 -82347175 + AluJb SINE Alu 1 297 -15 257 226 12 0 chr18 4330587 4330671 -82346877 + (TA)n Simple_repeat Simple_repeat 2 86 0 491 204 166 62 chr18 4330680 4330891 -82346657 - L1MC4 LINE L1 0 8042 7810 23 33 0 0 chr18 4331475 4331505 -82346043 + AT_rich Low_complexity Low_complexity 1 30 0 880 183 6 0 chr18 4331518 4331682 -82345866 - AluJb SINE Alu -4 308 144 1058 90 0 0 chr18 4332088 4332221 -82345327 + AluSq/x SINE Alu 1 133 -180 258 32 0 0 chr18 4333465 4333496 -82344052 + (TA)n Simple_repeat Simple_repeat 1 31 0 25 0 0 0 chr18 4333798 4333823 -82343725 + AT_rich Low_complexity Low_complexity 1 25 0 598 207 7 15 chr18 4334584 4334719 -82342829 + MER53 DNA DNA 9 142 -47 180 0 0 0 chr18 4335322 4335342 -82342206 + (TC)n Simple_repeat Simple_repeat 1 20 0 989 139 24 36 chr18 4336878 4337043 -82340505 - AluJo/FRAM SINE Alu -16 296 134 2010 125 28 3 chr18 4337043 4337331 -82340217 - AluSx SINE Alu -13 299 5 1564 187 0 32 chr18 4337472 4337750 -82339798 - AluJb SINE Alu -39 273 5 236 262 134 81 chr18 4338435 4338485 -82339063 - MIR3 SINE MIR -8 200 154 638 217 12 133 chr18 4338485 4338734 -82338814 + MER58A DNA MER1_type 2 220 -4 236 262 134 81 chr18 4338734 4338832 -82338716 - MIR3 SINE MIR -54 154 44 219 272 136 0 chr18 4338854 4338935 -82338613 + MIR SINE MIR 53 144 -118 401 289 53 32 chr18 4339812 4339999 -82337549 - MIR SINE MIR -1 261 71 1356 173 43 63 chr18 4340729 4341029 -82336519 - AluJo SINE Alu -18 294 1 706 198 261 20 chr18 4342047 4342212 -82335336 - L1MD2 LINE L1 -1 6358 6234 2315 86 30 0 chr18 4342212 4342514 -82335034 - AluY SINE Alu 0 311 1 706 198 261 20 chr18 4342514 4342601 -82334947 - L1MD2 LINE L1 -125 6234 6045 * 971 192 75 0 chr18 4342597 4342811 -82334737 - L1MDa LINE L1 -4230 2310 2081 326 131 0 131 chr18 4342819 4342849 -82334699 - L1MDa LINE L1 -4935 1605 1573 2460 82 0 0 chr18 4342849 4343154 -82334394 - AluSq SINE Alu -8 305 1 326 131 0 131 chr18 4343154 4343222 -82334326 - L1MDa LINE L1 -4967 1573 1520 1189 82 0 0 chr18 4343473 4343619 -82333929 - AluSg1 SINE Alu -163 146 1 207 0 0 0 chr18 4344735 4344758 -82332790 + (A)n Simple_repeat Simple_repeat 1 23 0 852 149 8 0 chr18 4344817 4344951 -82332597 - AluJo SINE Alu -177 135 1 423 260 82 0 chr18 4345110 4345256 -82332292 + L1ME4a LINE L1 5964 6121 0 1604 173 52 4 chr18 4345259 4345531 -82332017 - AluJo SINE Alu -27 285 1 22 56 0 0 chr18 4345771 4345807 -82331741 + AT_rich Low_complexity Low_complexity 1 36 0 2156 85 41 10 chr18 4346863 4347158 -82330390 + AluSx SINE Alu 3 306 -6 1932 157 6 6 chr18 4349930 4350242 -82327306 - AluJb SINE Alu 0 312 1 398 308 238 20 chr18 4350929 4351270 -82326278 + L2 LINE L2 2899 3313 0 311 204 380 0 chr18 4352654 4352796 -82324752 + L2 LINE L2 3117 3312 -1 2060 142 0 3 chr18 4353520 4353816 -82323732 + AluSx SINE Alu 1 295 -17 2216 111 0 19 chr18 4354200 4354507 -82323041 - AluSx SINE Alu -7 305 5 1965 112 3 60 chr18 4355530 4355844 -82321704 + AluSx SINE Alu 2 297 -15 2256 88 0 0 chr18 4355868 4356174 -82321374 + AluSx SINE Alu 1 306 0 2333 84 3 23 chr18 4357226 4357536 -82320012 - AluSx SINE Alu -8 304 1 218 217 0 0 chr18 4358141 4358187 -82319361 + A-rich Low_complexity Low_complexity 1 46 0 1810 112 88 0 chr18 4359508 4359768 -82317780 + AluSq SINE Alu 14 296 -17 26 0 0 0 chr18 4359768 4359794 -82317754 + AT_rich Low_complexity Low_complexity 1 26 0 1571 178 4 7 chr18 4360644 4360913 -82316635 + AluJo SINE Alu 1 268 -44 2305 95 0 19 chr18 4360915 4361232 -82316316 + AluY SINE Alu 1 311 0 32235 107 20 57 chr18 4361246 4366580 -82310968 + L1PA7 LINE L1 12 5066 -1088 2345 93 0 16 chr18 4366580 4366893 -82310655 + AluY SINE Alu 1 308 -3 32235 107 20 57 chr18 4366893 4367940 -82309608 + L1PA7 LINE L1 5066 6150 -4 1655 149 17 43 chr18 4368428 4368730 -82308818 + AluJo SINE Alu 1 294 -18 1846 160 0 25 chr18 4369874 4370193 -82307355 - AluJb SINE Alu -1 311 1 1817 134 80 0 chr18 4370380 4370656 -82306892 - AluSx SINE Alu -14 298 1 1653 157 53 0 chr18 4371446 4371727 -82305821 + AluJo SINE Alu 11 306 -6 416 284 0 0 chr18 4371930 4372032 -82305516 - MER103 DNA DNA -47 119 18 486 0 0 0 chr18 4373153 4373207 -82304341 + (TG)n Simple_repeat Simple_repeat 2 55 0 2392 82 0 13 chr18 4373611 4373914 -82303634 + AluSx SINE Alu 1 299 -13 718 280 160 12 chr18 4374166 4374566 -82302982 - Charlie7 DNA MER1_type -1889 723 265 2092 178 98 17 chr18 4374566 4375033 -82302515 - MLT1D LTR MaLR 0 505 1 2059 127 7 10 chr18 4375623 4375930 -82301618 - AluSx SINE Alu -6 306 1 727 172 22 15 chr18 4376078 4376212 -82301336 + AluJo SINE Alu 2 136 -176 2609 58 0 10 chr18 4376230 4376542 -82301006 - AluY SINE Alu -2 309 1 1809 167 0 55 chr18 4377322 4377652 -82299896 + AluJb SINE Alu 1 312 0 2273 113 3 3 chr18 4378666 4378975 -82298573 + AluSg SINE Alu 1 309 -1 313 322 98 0 chr18 4379109 4379252 -82298296 - MIR3 SINE MIR -15 193 37 2689 110 2 116 chr18 4379391 4379675 -82297873 - MSTA LTR MaLR 0 428 220 2234 104 43 0 chr18 4379675 4379974 -82297574 - AluSx SINE Alu 0 312 1 2689 110 2 116 chr18 4379974 4380170 -82297378 - MSTA LTR MaLR -208 220 3 2529 68 0 6 chr18 4381005 4381316 -82296232 - AluY SINE Alu -2 309 1 884 147 0 22 chr18 4381836 4381972 -82295576 + FLAM_C SINE Alu 1 133 0 819 150 8 8 chr18 4382032 4382165 -82295383 - FLAM_C SINE Alu 0 133 1 821 157 0 0 chr18 4382691 4382812 -82294736 + FLAM_A SINE Alu 1 121 -12 245 337 55 12 chr18 4383395 4383558 -82293990 - L2 LINE L2 -213 3059 2890 2322 110 0 0 chr18 4383560 4383860 -82293688 + AluSx SINE Alu 1 300 -12 2462 95 0 0 chr18 4383864 4384169 -82293379 + AluSx SINE Alu 3 307 -5 628 236 29 72 chr18 4385260 4385276 -82292272 - MER63A DNA MER1_type -1489 199 184 3288 121 70 79 chr18 4385276 4385894 -82291654 - LTR9 LTR ERV1 0 612 1 628 236 29 72 chr18 4385894 4386085 -82291463 - MER63A DNA MER1_type -1504 184 1 201 306 65 28 chr18 4386290 4386398 -82291150 + MIR SINE MIR 27 138 -124 2068 122 3 14 chr18 4386447 4386741 -82290807 + AluSx SINE Alu 1 291 -21 459 300 6 12 chr18 4386792 4387130 -82290418 + (TGG)n Simple_repeat Simple_repeat 1 336 0 22 0 0 0 chr18 4387134 4387156 -82290392 + AT_rich Low_complexity Low_complexity 1 22 0 1678 199 0 3 chr18 4387157 4387439 -82290109 - AluJo SINE Alu -31 281 1 306 50 0 0 chr18 4387457 4387497 -82290051 + (TA)n Simple_repeat Simple_repeat 2 41 0 770 145 0 0 chr18 4387499 4387616 -82289932 - FLAM_C SINE Alu -15 118 2 2253 111 3 0 chr18 4387644 4387941 -82289607 + AluSq SINE Alu 1 298 -15 2195 91 11 0 chr18 4387941 4388228 -82289320 + AluSx SINE Alu 1 290 -22 2348 97 3 0 chr18 4389177 4389485 -82288063 - AluSp SINE Alu -4 309 1 351 0 0 0 chr18 4389540 4389579 -82287969 + (TG)n Simple_repeat Simple_repeat 2 40 0 506 263 62 6 chr18 4389816 4389976 -82287572 - L2 LINE L2 -501 2813 2645 335 276 51 0 chr18 4390292 4390390 -82287158 - L2 LINE L2 -1 3271 3169 189 0 0 0 chr18 4391662 4391683 -82285865 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 3416 151 62 74 chr18 4391716 4392511 -82285037 - LTR1 LTR ERV1 0 785 1 1862 112 51 7 chr18 4392769 4393064 -82284484 - AluSx SINE Alu 0 312 1 1357 117 5 42 chr18 4393243 4393456 -82284092 + AluJo SINE Alu 85 289 -23 213 94 0 0 chr18 4393459 4393491 -82284057 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 259 267 101 15 chr18 4393763 4393942 -82283606 - MER34B LTR ERV1 -384 260 10 303 316 51 0 chr18 4394337 4394435 -82283113 - MIR SINE MIR -105 157 55 1826 128 4 4 chr18 4394440 4394698 -82282850 + AluSx SINE Alu 40 297 -15 1638 142 15 80 chr18 4394713 4395037 -82282511 + AluJo SINE Alu 3 305 -7 425 268 7 33 chr18 4396937 4397090 -82280458 - L2 LINE L2 -1 3312 3164 589 232 32 0 chr18 4397358 4397483 -82280065 - MLT1H1 LTR MaLR -7 548 420 1871 199 98 12 chr18 4397501 4397538 -82280010 - MLT2B1 LTR ERVL 0 554 522 435 19 0 0 chr18 4397538 4397590 -82279958 + (TG)n Simple_repeat Simple_repeat 2 53 0 1871 199 98 12 chr18 4397590 4398000 -82279548 - MLT2B1 LTR ERVL -32 522 1 1044 239 56 66 chr18 4398000 4398375 -82279173 - MLT1H1 LTR MaLR -177 378 8 2118 119 10 3 chr18 4398489 4398783 -82278765 - AluSx SINE Alu -16 296 1 216 0 0 0 chr18 4399524 4399548 -82278000 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 33 0 0 0 chr18 4399653 4399686 -82277862 + AT_rich Low_complexity Low_complexity 1 33 0 343 290 49 27 chr18 4399687 4399870 -82277678 - MLT1-int LTR MaLR -899 472 286 2174 107 7 19 chr18 4399891 4400201 -82277347 + AluSq SINE Alu 1 306 -7 985 234 95 7 chr18 4400239 4400513 -82277035 - MLT1H1 LTR MaLR -250 305 8 615 236 16 0 chr18 4400577 4400700 -82276848 + FLAM_A SINE Alu 2 126 -7 465 276 20 54 chr18 4401257 4401460 -82276088 - L2 LINE L2 -5 3308 3113 574 218 0 0 chr18 4401465 4401575 -82275973 + FLAM_A SINE Alu 1 110 -32 182 91 30 0 chr18 4401594 4401627 -82275921 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 258 343 48 32 chr18 4401658 4401906 -82275642 - L2 LINE L2 -245 3068 2817 2394 82 0 3 chr18 4401909 4402212 -82275336 + AluSc SINE Alu 1 302 -7 333 100 0 0 chr18 4402338 4402388 -82275160 + (TG)n Simple_repeat Simple_repeat 2 51 0 1265 193 120 4 chr18 4403376 4403650 -82273898 - MER63 DNA MER1_type 0 1062 757 964 193 29 55 chr18 4403813 4403865 -82273683 - MER63 DNA MER1_type -829 232 180 2682 26 0 7 chr18 4403865 4404168 -82273380 + AluY SINE Alu 1 301 -10 964 193 29 55 chr18 4404168 4404353 -82273195 - MER63 DNA MER1_type -881 180 1 2316 74 0 45 chr18 4404723 4405032 -82272516 + AluY SINE Alu 1 295 -16 1637 159 3 55 chr18 4409121 4409430 -82268118 + AluJo SINE Alu 1 293 -19 1570 114 20 143 chr18 4409582 4409752 -82267796 - AluYb8 SINE Alu 0 308 201 2306 74 13 7 chr18 4409752 4410075 -82267473 - AluSx SINE Alu 0 312 1 1570 114 20 143 chr18 4410075 4410254 -82267294 - AluYb8 SINE Alu -107 201 2 2294 107 0 0 chr18 4410379 4410687 -82266861 - AluSc SINE Alu -1 308 1 2155 104 7 0 chr18 4410690 4410979 -82266569 - AluSg SINE Alu -19 291 1 537 170 0 0 chr18 4411282 4411382 -82266166 - FLAM_A SINE Alu -1 141 42 2059 141 3 3 chr18 4411424 4411728 -82265820 + AluSx SINE Alu 3 306 -6 182 350 114 0 chr18 4412115 4412238 -82265310 + MIR SINE MIR 106 242 -20 419 250 55 86 chr18 4413862 4414001 -82263547 + MIR SINE MIR 47 178 -84 2248 105 3 0 chr18 4414001 4414295 -82263253 + AluSx SINE Alu 1 295 -17 419 250 55 86 chr18 4414295 4414375 -82263173 + MIR SINE MIR 178 259 -3 22 0 0 0 chr18 4414414 4414436 -82263112 + AT_rich Low_complexity Low_complexity 1 22 0 1979 112 7 24 chr18 4414487 4414797 -82262751 - AluSq SINE Alu 0 307 3 2384 60 0 3 chr18 4414817 4415123 -82262425 - AluY SINE Alu 0 305 1 23 33 0 0 chr18 4415176 4415206 -82262342 + AT_rich Low_complexity Low_complexity 1 30 0 1817 161 38 0 chr18 4415361 4415652 -82261896 - AluJo SINE Alu -10 302 1 30 59 0 0 chr18 4416382 4416433 -82261115 + AT_rich Low_complexity Low_complexity 1 51 0 1368 133 33 0 chr18 4416459 4416669 -82260879 + AluJb SINE Alu 86 302 -10 946 251 60 49 chr18 4416765 4417052 -82260496 - L1MC4a LINE L1 -1822 5986 5692 2322 77 0 7 chr18 4417052 4417367 -82260181 + AluSq SINE Alu 1 313 0 946 251 60 49 chr18 4417367 4417448 -82260100 - L1MC4a LINE L1 -2116 5692 5613 653 260 122 58 chr18 4417460 4417821 -82259727 - MLT1I LTR MaLR -15 394 11 435 217 210 80 chr18 4417866 4418083 -82259465 - L1MC4a LINE L1 -2226 5582 5318 2651 56 0 0 chr18 4418083 4418387 -82259161 - AluY SINE Alu -7 304 1 435 217 210 80 chr18 4418387 4418455 -82259093 - L1MC4a LINE L1 -2490 5318 5260 272 91 23 0 chr18 4418482 4418526 -82259022 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 1265 261 60 24 chr18 4418526 4418943 -82258605 - L1MC4a LINE L1 -1860 5948 5517 356 313 66 56 chr18 4419017 4419215 -82258333 - MIR SINE MIR -3 259 60 1396 152 8 13 chr18 4419351 4419588 -82257960 + MER46A DNA MER2_type 1 236 0 381 75 0 0 chr18 4420141 4420194 -82257354 + (TG)n Simple_repeat Simple_repeat 2 54 0 2120 86 38 0 chr18 4420207 4420499 -82257049 - AluSp SINE Alu -10 303 1 27 62 0 0 chr18 4420542 4420590 -82256958 + AT_rich Low_complexity Low_complexity 1 48 0 774 266 105 4 chr18 4420715 4420944 -82256604 + MIR SINE MIR 4 255 -7 211 269 87 67 chr18 4421576 4421680 -82255868 - L2 LINE L2 0 3313 3208 2583 36 0 0 chr18 4421711 4422017 -82255531 + AluY SINE Alu 1 306 -5 2075 96 11 0 chr18 4422367 4422699 -82254849 - AluSq SINE Alu 0 335 1 1671 172 0 10 chr18 4423234 4423525 -82254023 + AluJo SINE Alu 13 300 -12 2407 53 0 3 chr18 4423526 4423828 -82253720 + AluY SINE Alu 1 301 -10 1689 168 0 32 chr18 4424009 4424318 -82253230 - AluJb SINE Alu -13 299 1 2120 112 0 0 chr18 4424747 4425042 -82252506 + AluSc SINE Alu 1 295 -14 1941 132 7 13 chr18 4425053 4425357 -82252191 + AluSx SINE Alu 1 302 -10 270 291 143 11 chr18 4425544 4425733 -82251815 - L2 LINE L2 -223 3049 2836 2359 39 0 29 chr18 4426330 4426636 -82250912 + AluY SINE Alu 1 297 -14 269 271 77 44 chr18 4427658 4427931 -82249617 - L1ME4a LINE L1 -116 6005 5724 2107 102 0 23 chr18 4428349 4428653 -82248895 - AluSc SINE Alu -12 297 1 317 331 85 99 chr18 4428688 4428981 -82248567 + L1ME3A LINE L1 274 562 -5557 2187 92 0 7 chr18 4429170 4429476 -82248072 + AluSq SINE Alu 5 308 -5 1468 166 66 3 chr18 4429694 4429983 -82247565 + AluJb SINE Alu 1 307 -5 1792 168 3 0 chr18 4429997 4430295 -82247253 - AluJb SINE Alu -5 307 9 1987 131 0 10 chr18 4430485 4430797 -82246751 + AluSx SINE Alu 1 309 -3 583 296 90 38 chr18 4430808 4431211 -82246337 + L1ME3A LINE L1 4516 4949 -1180 2054 215 23 43 chr18 4431211 4431742 -82245806 - MLT2B1 LTR ERVL 0 520 1 583 296 90 38 chr18 4431742 4431818 -82245730 + L1ME3A LINE L1 4949 5020 -1109 280 257 22 5 chr18 4431923 4432046 -82245502 + L1ME3A LINE L1 5330 5456 -697 2336 42 0 3 chr18 4432047 4432379 -82245169 - AluY SINE Alu 0 331 1 758 173 0 8 chr18 4432381 4432508 -82245040 - AluJ SINE Alu -6 306 181 623 147 174 0 chr18 4432510 4432619 -82244929 - AluJ SINE Alu -174 128 1 679 259 112 48 chr18 4432623 4433086 -82244462 + L1ME3A LINE L1 5453 5945 -208 1977 142 7 0 chr18 4433281 4433583 -82243965 + AluSx SINE Alu 1 304 -8 2204 80 10 3 chr18 4433593 4433893 -82243655 + AluSx SINE Alu 1 302 -10 264 167 0 0 chr18 4433893 4433941 -82243607 + GA-rich Low_complexity Low_complexity 1 48 0 818 186 0 0 chr18 4433967 4434096 -82243452 + FRAM SINE Alu 24 152 -24 911 124 0 16 chr18 4434529 4434658 -82242890 + FLAM_C SINE Alu 1 127 -6 581 205 0 26 chr18 4434720 4434837 -82242711 - L1MB8 LINE L1 -1 6177 6064 1986 122 27 3 chr18 4434850 4435145 -82242403 - AluSx SINE Alu -10 302 1 1778 158 7 10 chr18 4435145 4435447 -82242101 - AluJb SINE Alu 0 312 11 1823 141 17 0 chr18 4435457 4435755 -82241793 - AluJb SINE Alu -9 303 1 2205 77 37 0 chr18 4437965 4438262 -82239286 - AluSx SINE Alu -4 308 1 526 294 47 6 chr18 4438475 4438645 -82238903 - MIR SINE MIR -17 245 69 2220 103 3 0 chr18 4438664 4438974 -82238574 + AluSx SINE Alu 1 311 -1 2247 84 0 3 chr18 4439363 4439660 -82237888 + AluY SINE Alu 1 296 -15 1290 161 8 46 chr18 4439791 4439979 -82237569 - AluJb SINE Alu -19 293 116 2611 130 20 10 chr18 4439979 4440378 -82237170 - MER57A LTR ERV1 0 403 1 1290 161 8 46 chr18 4440378 4440449 -82237099 - AluJb SINE Alu -196 116 44 330 163 0 0 chr18 4440600 4440649 -82236899 - AluJb SINE Alu -251 49 1 757 204 60 0 chr18 4440672 4440839 -82236709 - MER5A DNA MER1_type -12 177 1 2140 98 0 0 chr18 4440912 4441224 -82236324 + AluSq SINE Alu 1 312 0 1850 188 81 77 chr18 4441274 4441768 -82235780 - MLT1D LTR MaLR -8 497 2 1011 185 12 0 chr18 4441789 4441962 -82235586 + FAM SINE Alu 1 175 0 192 77 0 0 chr18 4442009 4442035 -82235513 + (A)n Simple_repeat Simple_repeat 1 26 0 1854 138 68 50 chr18 4442542 4442817 -82234731 - MLT1B LTR MaLR 0 390 105 2334 61 0 3 chr18 4442817 4443112 -82234436 - AluY SINE Alu -17 294 1 1854 138 68 50 chr18 4443112 4443219 -82234329 - MLT1B LTR MaLR -285 105 1 2198 78 0 23 chr18 4443350 4443656 -82233892 + AluY SINE Alu 1 299 -12 209 33 33 0 chr18 4443684 4443714 -82233834 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2197 91 0 0 chr18 4443716 4444002 -82233546 - AluSg SINE Alu -24 286 1 822 157 18 72 chr18 4444572 4444597 -82232951 + Tigger1 DNA MER2_type 1 26 -2392 2068 98 0 7 chr18 4444597 4444905 -82232643 - AluSq SINE Alu 0 307 2 822 157 18 72 chr18 4444905 4445044 -82232504 + Tigger1 DNA MER2_type 26 157 -2261 2076 102 31 3 chr18 4445051 4445344 -82232204 - AluSq SINE Alu -12 301 1 230 232 29 43 chr18 4445367 4445436 -82232112 + MIR SINE MIR 16 83 -125 631 253 49 58 chr18 4445450 4445869 -82231679 - MLT1F LTR MaLR -9 533 93 1941 125 3 16 chr18 4445882 4446193 -82231355 - AluJb SINE Alu -5 307 1 327 329 79 0 chr18 4446284 4446424 -82231124 + MER58B DNA MER1_type 191 341 0 367 186 0 0 chr18 4446428 4446487 -82231061 - MLT1F LTR MaLR -533 62 4 2176 110 0 3 chr18 4447440 4447750 -82229798 + AluSx SINE Alu 2 310 -2 1793 92 11 49 chr18 4447795 4448079 -82229469 - AluSp SINE Alu -12 301 29 2060 96 14 0 chr18 4448449 4448740 -82228808 + AluSq SINE Alu 1 295 -18 232 196 103 62 chr18 4448810 4448907 -82228641 - MIR SINE MIR -50 212 112 1513 142 24 24 chr18 4449046 4449334 -82228214 + AluJo SINE Alu 14 301 -11 2059 95 20 10 chr18 4449531 4449826 -82227722 + AluSq SINE Alu 1 298 -15 406 292 15 51 chr18 4450266 4450461 -82227087 - MIR SINE MIR -26 236 49 635 185 0 0 chr18 4450475 4450583 -82226965 - FLAM_A SINE Alu -23 119 12 998 122 7 0 chr18 4451525 4451672 -82225876 - FRAM SINE Alu -18 158 11 1702 146 13 27 chr18 4451815 4452116 -82225432 - AluSx SINE Alu -15 297 1 1736 142 137 57 chr18 4452121 4452522 -82225026 - LTR49 LTR ERV1 -160 435 3 2350 82 0 22 chr18 4452574 4452893 -82224655 - AluSq SINE Alu -1 312 1 431 279 81 12 chr18 4452998 4453159 -82224389 - MIR SINE MIR -47 215 44 514 231 15 15 chr18 4453187 4453321 -82224227 - MER39 LTR ERV1 -20 687 554 1152 149 0 16 chr18 4453324 4453512 -82224036 + AluJo SINE Alu 3 187 -125 2016 105 31 0 chr18 4453540 4453826 -82223722 + AluSx SINE Alu 1 295 -17 627 168 199 37 chr18 4453869 4454030 -82223518 - MER39 LTR ERV1 -237 470 284 290 205 51 51 chr18 4454032 4454110 -82223438 - LTR48B LTR ERV1 -566 78 1 410 265 59 53 chr18 4454301 4454332 -82223216 - MLT1L LTR MaLR -175 440 411 1885 119 35 0 chr18 4454332 4454618 -82222930 - AluSp SINE Alu -17 296 1 410 265 59 53 chr18 4454618 4454956 -82222592 - MLT1L LTR MaLR -204 411 2 1307 161 157 4 chr18 4455210 4455477 -82222071 + AluJo SINE Alu 1 308 -4 1956 93 35 14 chr18 4455535 4455825 -82221723 + AluSq SINE Alu 1 296 -17 294 212 50 10 chr18 4455886 4455985 -82221563 - L1ME4a LINE L1 -2 6119 6017 280 180 8 0 chr18 4456838 4456894 -82220654 + MIR SINE MIR 57 117 -91 242 217 98 98 chr18 4456907 4456999 -82220549 - MIR3 SINE MIR -14 194 103 426 224 138 78 chr18 4457689 4457921 -82219627 + MER112 DNA MER1_type 9 254 -6 255 103 0 0 chr18 4458185 4458224 -82219324 + (TG)n Simple_repeat Simple_repeat 2 40 0 2496 39 3 0 chr18 4460039 4460349 -82217199 - AluY SINE Alu 0 311 1 1066 94 0 0 chr18 4460627 4460803 -82216745 - AluSg/x SINE Alu 0 307 132 2163 110 0 7 chr18 4460803 4461112 -82216436 - AluSx SINE Alu -5 307 1 216 0 0 0 chr18 4461209 4461233 -82216315 + (CA)n Simple_repeat Simple_repeat 2 25 0 1951 132 3 0 chr18 4461287 4461574 -82215974 + AluSx SINE Alu 1 288 -24 393 272 0 22 chr18 4461577 4461669 -82215879 - L1MC4 LINE L1 -1339 6703 6614 392 286 32 16 chr18 4461673 4461800 -82215748 - L1MC4 LINE L1 -1140 6645 6538 918 117 0 0 chr18 4461800 4461979 -82215569 + (TA)n Simple_repeat Simple_repeat 1 179 0 392 286 32 16 chr18 4461979 4462006 -82215542 - L1MC4 LINE L1 -1247 6538 6513 322 255 108 10 chr18 4462007 4462109 -82215439 - L1MC4 LINE L1 -1339 6703 6592 1984 81 68 14 chr18 4462185 4462480 -82215068 + AluSq SINE Alu 1 311 -2 1265 148 0 28 chr18 4462586 4462802 -82214746 + AluJo SINE Alu 89 298 -14 2221 83 10 0 chr18 4462804 4463105 -82214443 + AluSc SINE Alu 1 304 -5 211 267 139 0 chr18 4463395 4463481 -82214067 + MIR SINE MIR 117 214 -48 1706 112 93 4 chr18 4463648 4463916 -82213632 + AluSx SINE Alu 2 293 -19 2102 116 0 0 chr18 4463953 4464256 -82213292 + AluSx SINE Alu 1 303 -9 1951 105 7 24 chr18 4464358 4464653 -82212895 - AluSc SINE Alu -19 290 1 224 330 73 9 chr18 4466015 4466124 -82211424 - L2 LINE L2 -5 3308 3193 2125 118 0 0 chr18 4466262 4466566 -82210982 + AluSx SINE Alu 1 304 -8 213 39 0 0 chr18 4468355 4468381 -82209167 + (GGGA)n Simple_repeat Simple_repeat 1 26 0 312 284 60 17 chr18 4469636 4469752 -82207796 + MIR3 SINE MIR 34 154 -54 299 107 36 0 chr18 4469779 4469835 -82207713 + T-rich Low_complexity Low_complexity 3 180 0 2001 148 0 16 chr18 4469835 4470153 -82207395 - AluJb SINE Alu 0 369 1 316 349 143 16 chr18 4470666 4470981 -82206567 - L3 LINE CR1 -23 1554 1200 1381 154 60 82 chr18 4470985 4471304 -82206244 - AluJb SINE Alu 0 312 1 853 212 101 42 chr18 4471580 4471729 -82205819 - MER5C DNA MER1_type 0 324 185 216 0 0 0 chr18 4471729 4471753 -82205795 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 853 212 101 42 chr18 4471753 4471816 -82205732 - MER5C DNA MER1_type -139 185 127 2068 115 0 59 chr18 4471816 4472137 -82205411 - AluSq SINE Alu -11 302 1 853 212 101 42 chr18 4472137 4472229 -82205319 - MER5C DNA MER1_type -197 127 1 678 224 28 65 chr18 4472242 4472456 -82205092 + MER63A DNA MER1_type 5 210 0 2101 131 3 0 chr18 4472500 4472797 -82204751 + AluSq SINE Alu 1 298 -15 29 47 0 0 chr18 4473115 4473158 -82204390 + AT_rich Low_complexity Low_complexity 1 43 0 2155 127 3 19 chr18 4473494 4473809 -82203739 - AluSx SINE Alu -2 310 1 2455 87 0 3 chr18 4473901 4474211 -82203337 - AluSc SINE Alu 0 309 1 2359 85 3 0 chr18 4474238 4474533 -82203015 - AluSp SINE Alu -17 296 1 1715 74 283 179 chr18 4474823 4475297 -82202251 - LTR12 LTR ERV1 -133 581 59 277 211 0 0 chr18 4475299 4475351 -82202197 - LTR30 LTR ERV1 -670 52 1 2146 107 21 0 chr18 4475357 4475648 -82201900 + AluSq SINE Alu 2 298 -15 560 221 8 30 chr18 4476088 4476219 -82201329 + FLAM_A SINE Alu 1 128 -14 744 178 0 30 chr18 4476913 4477048 -82200500 - FLAM_C SINE Alu -11 132 2 1834 149 7 24 chr18 4477653 4477949 -82199599 + AluJo SINE Alu 1 291 -21 2167 118 0 0 chr18 4478756 4479045 -82198503 - AluSx SINE Alu -23 289 1 454 263 10 7 chr18 4479263 4479566 -82197982 + GA-rich Low_complexity Low_complexity 1 304 0 300 51 0 0 chr18 4479603 4479642 -82197906 + Alu SINE Alu 1 39 -263 477 119 12 36 chr18 4479689 4479773 -82197775 + FLAM_C SINE Alu 37 118 -25 467 172 20 0 chr18 4479793 4479892 -82197656 + GA-rich Low_complexity Low_complexity 4 104 0 221 244 0 0 chr18 4480733 4480778 -82196770 + (CCA)n Simple_repeat Simple_repeat 3 47 0 183 80 0 0 chr18 4481021 4481046 -82196502 + (T)n Simple_repeat Simple_repeat 1 25 0 195 42 0 0 chr18 4482190 4482214 -82195334 + (TCC)n Simple_repeat Simple_repeat 3 26 0 2194 113 3 0 chr18 4483201 4483492 -82194056 + AluSp SINE Alu 1 292 -21 476 151 0 0 chr18 4483493 4483566 -82193982 - L1MB3 LINE L1 -39 6144 6072 24 0 0 0 chr18 4483647 4483671 -82193877 + AT_rich Low_complexity Low_complexity 1 24 0 462 280 83 0 chr18 4483838 4483995 -82193553 - MIR SINE MIR -45 217 48 2438 85 0 0 chr18 4484056 4484350 -82193198 + AluSc SINE Alu 1 294 -15 553 236 26 77 chr18 4484530 4484725 -82192823 + MIR SINE MIR 70 254 -8 311 285 13 60 chr18 4485277 4485428 -82192120 - LTR33A LTR ERVL -3 520 377 2217 112 7 0 chr18 4485550 4485845 -82191703 + AluSq SINE Alu 1 297 -16 2536 67 0 3 chr18 4485845 4486144 -82191404 + AluSp SINE Alu 1 298 -15 2216 101 0 7 chr18 4486152 4486448 -82191100 + AluSg1 SINE Alu 1 294 -15 280 237 101 79 chr18 4486530 4486669 -82190879 - LTR50 LTR ERVL -636 159 18 2397 58 0 0 chr18 4487603 4487931 -82189617 + AluY SINE Alu 7 334 0 272 297 94 25 chr18 4488123 4488483 -82189065 + L1ME4a LINE L1 2750 3134 -3012 1585 195 16 10 chr18 4488709 4489017 -82188531 + AluJo SINE Alu 1 310 -2 2266 110 0 0 chr18 4489197 4489489 -82188059 - AluSq SINE Alu -19 294 3 25 0 0 0 chr18 4489633 4489658 -82187890 + AT_rich Low_complexity Low_complexity 1 25 0 428 255 0 0 chr18 4489667 4489769 -82187779 + U13 snRNA snRNA 1 102 -2 2168 119 0 7 chr18 4489961 4490286 -82187262 + AluSx SINE Alu 1 323 0 1060 67 0 0 chr18 4490506 4490641 -82186907 + AluSp/q SINE Alu 175 309 -4 362 309 46 7 chr18 4490646 4490798 -82186750 + L1ME4a LINE L1 4255 4412 -1734 2098 73 4 7 chr18 4490885 4491160 -82186388 + AluSc SINE Alu 1 274 -35 205 143 0 41 chr18 4491175 4491204 -82186344 + (TAAA)n Simple_repeat Simple_repeat 2 30 -18 1693 193 3 0 chr18 4491204 4491494 -82186054 + 7SLRNA srpRNA srpRNA 6 296 -24 205 143 0 41 chr18 4491494 4491513 -82186035 + (TAAA)n Simple_repeat Simple_repeat 30 48 0 2058 125 10 10 chr18 4491767 4492064 -82185484 - AluJo SINE Alu -15 297 1 2007 120 0 0 chr18 4492162 4492429 -82185119 + AluSx SINE Alu 31 297 -15 1754 151 35 111 chr18 4492498 4492868 -82184680 - Tigger3(Golem) DNA MER2_type -7 3022 1 403 328 38 27 chr18 4493223 4493406 -82184142 + L1ME4a LINE L1 5197 5381 -765 2235 93 4 0 chr18 4493413 4493718 -82183830 + AluSg SINE Alu 3 308 0 2466 82 0 0 chr18 4493725 4494029 -82183519 + AluY SINE Alu 1 304 -7 200 213 0 0 chr18 4494031 4494078 -82183470 + (TA)n Simple_repeat Simple_repeat 2 48 0 2112 120 7 0 chr18 4494512 4494804 -82182744 + AluSx SINE Alu 1 294 -18 388 0 39 0 chr18 4495616 4495668 -82181880 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 249 327 45 9 chr18 4495849 4495959 -82181589 + L2 LINE L2 3154 3267 -5 279 211 32 21 chr18 4496243 4496338 -82181210 + (TA)n Simple_repeat Simple_repeat 1 96 0 282 56 0 0 chr18 4496340 4496376 -82181172 + MADE1 DNA Mariner 45 80 0 392 289 113 32 chr18 4496404 4496715 -82180833 + L1ME4a LINE L1 5548 5883 -238 2314 85 0 31 chr18 4496838 4497157 -82180391 - AluSc SINE Alu 0 309 1 1999 117 7 7 chr18 4497269 4497559 -82179989 + AluSx SINE Alu 9 298 -14 564 201 67 15 chr18 4497610 4497744 -82179804 + MIR SINE MIR 12 152 -110 7258 153 38 53 chr18 4497765 4498942 -82178606 + L1MCa LINE L1 46 1198 -5228 2439 93 3 0 chr18 4498942 4499253 -82178295 + AluSp SINE Alu 1 312 -1 7258 153 38 53 chr18 4499253 4499584 -82177964 + L1MCa LINE L1 1198 1532 -4894 1712 184 10 3 chr18 4499584 4499904 -82177644 + AluJb SINE Alu 1 312 0 308 170 0 0 chr18 4499920 4499967 -82177581 + Alu SINE Alu 1 47 -255 1420 97 0 0 chr18 4499986 4500171 -82177377 + AluSg/x SINE Alu 121 305 -7 1352 155 5 0 chr18 4500171 4500377 -82177171 - THE1B LTR MaLR -157 207 1 363 240 0 0 chr18 4500377 4500452 -82177096 - FLAM_A SINE Alu -36 97 23 21 0 0 0 chr18 4500455 4500476 -82177072 + AT_rich Low_complexity Low_complexity 1 21 0 2318 80 7 3 chr18 4500476 4500762 -82176786 - AluSq SINE Alu -24 289 3 936 152 63 0 chr18 4500771 4500929 -82176619 + THE1B LTR MaLR 195 362 -2 2130 132 81 32 chr18 4500983 4501245 -82176303 + L1MCa LINE L1 1525 1773 -4653 1911 133 9 69 chr18 4501245 4501577 -82175971 - AluSx SINE Alu 0 312 1 2130 132 81 32 chr18 4501577 4502034 -82175514 + L1MCa LINE L1 1773 2429 -3997 511 73 29 0 chr18 4502034 4502102 -82175446 - MER75 DNA T2_type 0 514 445 1285 107 0 0 chr18 4502102 4502270 -82175278 - AluSg/x SINE Alu -11 301 134 2464 83 0 0 chr18 4502270 4502572 -82174976 - AluSg SINE Alu -8 302 1 3715 190 52 44 chr18 4502573 4502790 -82174758 + L1MCa LINE L1 1934 2148 -4278 2280 98 10 0 chr18 4502790 4503086 -82174462 + AluSg SINE Alu 1 299 -11 3715 190 52 44 chr18 4503086 4503338 -82174210 + L1MCa LINE L1 2148 2397 -4029 3689 93 14 0 chr18 4503338 4503845 -82173703 - MER75 DNA T2_type 0 514 1 3715 190 52 44 chr18 4503845 4504178 -82173370 + L1MCa LINE L1 2397 2726 -3700 1959 124 37 0 chr18 4504178 4504474 -82173074 + AluSx SINE Alu 1 306 0 3715 190 52 44 chr18 4504474 4504768 -82172780 + L1MCa LINE L1 2726 3016 -3410 1636 122 0 0 chr18 4504768 4504990 -82172558 - AluSq SINE Alu -15 298 77 3715 190 52 44 chr18 4504990 4505176 -82172372 + L1MCa LINE L1 3016 3199 -3227 2284 102 0 7 chr18 4505176 4505470 -82172078 - AluSg SINE Alu -17 293 2 3715 190 52 44 chr18 4505470 4505812 -82171736 + L1MCa LINE L1 3199 3575 -2851 322 233 0 0 chr18 4505812 4505872 -82171676 - AluJ/FLAM SINE Alu -237 65 6 3607 170 67 6 chr18 4505879 4506580 -82170968 + L1MC1 LINE L1 5584 6327 -6 216 291 38 13 chr18 4506612 4506691 -82170857 + MIR SINE MIR 152 232 -30 2341 78 3 0 chr18 4506871 4507182 -82170366 - AluSq SINE Alu 0 312 1 2338 108 3 0 chr18 4508878 4509185 -82168363 + AluSx SINE Alu 1 308 -4 1011 279 21 18 chr18 4509604 4509937 -82167611 + HAL1 LINE L1 1 334 -2173 1212 262 40 51 chr18 4509953 4510506 -82167042 + HAL1 LINE L1 405 951 -1556 1654 158 6 86 chr18 4510606 4510942 -82166606 + AluJo SINE Alu 2 310 -2 689 174 18 12 chr18 4510942 4511109 -82166439 + GA-rich Low_complexity Low_complexity 1 168 0 1979 138 13 3 chr18 4511163 4511461 -82166087 + AluSx SINE Alu 1 301 -11 258 105 0 0 chr18 4511521 4511559 -82165989 + (TA)n Simple_repeat Simple_repeat 1 38 0 1988 125 28 115 chr18 4511560 4511670 -82165878 - MLT1B LTR MaLR -2 388 270 2424 95 3 0 chr18 4511670 4511976 -82165572 + AluSx SINE Alu 1 307 -5 1988 125 28 115 chr18 4511976 4512185 -82165363 - MLT1B LTR MaLR -120 270 44 1912 153 3 10 chr18 4512185 4512493 -82165055 + AluJo SINE Alu 1 306 -6 2332 89 0 0 chr18 4512499 4512824 -82164724 + AluSg SINE Alu 1 325 0 1988 125 28 115 chr18 4512824 4512920 -82164628 - MLT1B LTR MaLR -351 39 1 350 194 156 151 chr18 4512925 4513080 -82164468 + HAL1 LINE L1 2109 2262 -245 2364 104 0 0 chr18 4513080 4513387 -82164161 + AluSg SINE Alu 1 307 -3 350 194 156 151 chr18 4513387 4513622 -82163926 + HAL1 LINE L1 2262 2501 -6 1933 155 0 7 chr18 4513659 4513956 -82163592 - AluSx SINE Alu -17 295 1 462 208 10 0 chr18 4513957 4514053 -82163495 - L1M4 LINE L1 -2022 4124 4028 948 147 6 19 chr18 4514071 4514228 -82163320 - AluJb SINE Alu -157 155 1 756 198 11 6 chr18 4514252 4514429 -82163119 - L1M4 LINE L1 -2130 4016 3839 4175 170 42 49 chr18 4514437 4515384 -82162164 - L1MB5 LINE L1 -6 6168 5215 2555 52 0 3 chr18 4515384 4515691 -82161857 - AluY SINE Alu -5 306 1 3295 229 62 14 chr18 4515692 4516279 -82161269 - L1MB5 LINE L1 -2850 3296 2640 1662 166 35 3 chr18 4516279 4516569 -82160979 - AluJb SINE Alu -13 299 1 3295 229 62 14 chr18 4516569 4516983 -82160565 - L1MB5 LINE L1 -3506 2640 2247 1025 125 0 0 chr18 4517000 4517136 -82160412 - AluSq/x SINE Alu -177 136 1 614 213 45 25 chr18 4517136 4517338 -82160210 - L1MEc LINE L1 -4021 2375 2170 2138 131 0 16 chr18 4517411 4517724 -82159824 - AluSx SINE Alu -4 308 1 777 167 0 8 chr18 4517824 4517991 -82159557 + AluSg/x SINE Alu 154 319 0 1239 176 27 23 chr18 4517991 4518252 -82159296 + L1M4 LINE L1 2673 2934 -3212 394 262 7 65 chr18 4518247 4518295 -82159253 - L1PBa LINE L1 -4265 1951 1902 * 2025 146 7 0 chr18 4518295 4518603 -82158945 - AluSx SINE Alu -2 310 1 394 262 7 65 chr18 4518603 4518701 -82158847 - L1PBa LINE L1 -4314 1902 1800 207 0 0 0 chr18 4518701 4518724 -82158824 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 394 262 7 65 chr18 4518724 4518752 -82158796 - L1PBa LINE L1 -4416 1800 1590 * 1306 243 114 2 chr18 4518745 4519149 -82158399 - L1MEc LINE L1 -5926 470 22 2374 67 17 0 chr18 4519246 4519544 -82158004 + AluY SINE Alu 1 303 -8 263 253 0 11 chr18 4521396 4521487 -82156061 + CT-rich Low_complexity Low_complexity 2 91 0 2187 131 0 10 chr18 4522212 4522526 -82155022 - AluSx SINE Alu -1 311 1 234 91 0 0 chr18 4524302 4524335 -82153213 + (T)n Simple_repeat Simple_repeat 1 33 0 4183 149 4 20 chr18 4524920 4525636 -82151912 + L1MB3 LINE L1 5477 6181 -2 2265 117 0 3 chr18 4526186 4526548 -82151000 + AluSx SINE Alu 1 361 0 2297 90 37 10 chr18 4526661 4526961 -82150587 - AluSp SINE Alu -5 308 1 2468 84 0 3 chr18 4526975 4527285 -82150263 - AluY SINE Alu -2 309 1 369 0 0 0 chr18 4527597 4527638 -82149910 + (CA)n Simple_repeat Simple_repeat 2 42 0 2200 118 7 3 chr18 4527720 4528024 -82149524 + AluSx SINE Alu 2 306 -6 246 62 0 0 chr18 4528024 4528056 -82149492 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 394 86 0 0 chr18 4528880 4528938 -82148610 + L1MA2 LINE L1 6243 6300 -4 1014 160 0 0 chr18 4528972 4529128 -82148420 + FRAM SINE Alu 1 156 -10 364 171 86 0 chr18 4529440 4529510 -82148038 - AluJ/FRAM SINE Alu -2 300 225 1266 153 5 0 chr18 4529511 4529701 -82147847 - AluSx SINE Alu -121 191 1 235 278 51 51 chr18 4529813 4529989 -82147559 + MER104 DNA Tc2 5 180 0 2350 94 7 0 chr18 4530104 4530413 -82147135 - AluSp SINE Alu -2 311 1 262 227 118 64 chr18 4530414 4530524 -82147024 - L1MC5 LINE L1 -44 7917 7802 2056 157 3 0 chr18 4530558 4530858 -82146690 + AluSx SINE Alu 3 303 -9 1984 128 3 3 chr18 4530928 4531217 -82146331 + AluSx SINE Alu 1 289 -23 2312 95 0 7 chr18 4531261 4531556 -82145992 - AluSq SINE Alu -20 293 1 1665 192 10 3 chr18 4532279 4532586 -82144962 - AluJo SINE Alu -3 309 1 295 351 88 0 chr18 4533043 4533157 -82144391 + L2 LINE L2 3137 3260 -12 1860 221 11 0 chr18 4533258 4533616 -82143932 - MLT1A1 LTR MaLR -3 362 1 194 343 34 45 chr18 4533621 4533799 -82143749 + L3 LINE CR1 1383 1558 -19 21 0 0 0 chr18 4534701 4534722 -82142826 + AT_rich Low_complexity Low_complexity 1 21 0 410 154 64 0 chr18 4534727 4534805 -82142743 + L1MB4 LINE L1 6092 6174 -6 1738 144 18 25 chr18 4534820 4535158 -82142390 + AluJb SINE Alu 3 338 0 198 0 0 0 chr18 4535278 4535300 -82142248 + (A)n Simple_repeat Simple_repeat 1 22 0 21 57 0 0 chr18 4535410 4535445 -82142103 + AT_rich Low_complexity Low_complexity 1 35 0 2274 91 0 10 chr18 4537016 4537314 -82140234 + AluSg SINE Alu 5 299 -11 750 171 0 8 chr18 4537982 4538105 -82139443 - FLAM_C SINE Alu -16 127 6 391 229 100 7 chr18 4538125 4538265 -82139283 - L1MA9 LINE L1 -30 6282 6130 636 104 9 87 chr18 4538294 4538409 -82139139 - L1MB1 LINE L1 -307 5882 5777 1541 201 6 32 chr18 4538410 4538724 -82138824 - AluJo SINE Alu -6 306 1 327 130 15 34 chr18 4538730 4538834 -82138714 - L1MB1 LINE L1 -768 5363 5267 2496 57 0 3 chr18 4538849 4539145 -82138403 - AluY SINE Alu -16 295 1 996 234 2 59 chr18 4539145 4539303 -82138245 - L1 LINE L1 -811 5335 5170 2323 101 0 19 chr18 4539303 4539620 -82137928 - AluSx SINE Alu -1 311 1 996 234 2 59 chr18 4539620 4539867 -82137681 - L1 LINE L1 -976 5170 4845 2056 132 17 0 chr18 4539868 4540164 -82137384 + AluSx SINE Alu 1 301 -11 2356 105 0 6 chr18 4540274 4540589 -82136959 + AluSq SINE Alu 1 313 0 1935 173 65 8 chr18 4541935 4542304 -82135244 - MLT1B LTR MaLR 0 390 1 1195 198 12 130 chr18 4542605 4542654 -82134894 - MLT1A1 LTR MaLR 0 365 312 1185 58 0 13 chr18 4542654 4542809 -82134739 - L1PA8 LINE L1 -4 6168 6016 1195 198 12 130 chr18 4542809 4543173 -82134375 - MLT1A1 LTR MaLR -53 312 1 12929 114 28 49 chr18 4544119 4544874 -82132674 + Tigger1 DNA MER2_type 1 771 -1647 2359 90 3 0 chr18 4544874 4545175 -82132373 - AluSq SINE Alu -11 302 1 12929 114 28 49 chr18 4545175 4545803 -82131745 + Tigger1 DNA MER2_type 771 1411 -1007 2052 142 47 39 chr18 4545803 4546163 -82131385 + THE1B LTR MaLR 1 363 -1 12929 114 28 49 chr18 4546163 4546308 -82131240 + Tigger1 DNA MER2_type 1411 1558 -860 958 65 26 85 chr18 4546308 4546461 -82131087 + L1MA1 LINE L1 6155 6298 -4 12929 114 28 49 chr18 4546461 4546911 -82130637 + Tigger1 DNA MER2_type 1558 2016 -402 2173 119 7 3 chr18 4546911 4547214 -82130334 - AluJb SINE Alu -8 304 1 2423 60 7 3 chr18 4547224 4547522 -82130026 - AluY SINE Alu -12 299 1 12929 114 28 49 chr18 4547522 4547669 -82129879 + Tigger1 DNA MER2_type 2025 2094 -324 879 138 8 0 chr18 4547669 4547799 -82129749 + FLAM_C SINE Alu 1 131 -12 2114 108 63 18 chr18 4547812 4548145 -82129403 + Tigger1 DNA MER2_type 2071 2418 0 1253 98 0 6 chr18 4548440 4548604 -82128944 + AluSg/x SINE Alu 135 297 -13 653 219 126 0 chr18 4549266 4549417 -82128131 + FAM SINE Alu 1 170 -5 2385 136 20 17 chr18 4549443 4549849 -82127699 + L1MB1 LINE L1 5762 6168 0 810 127 0 0 chr18 4550980 4551090 -82126458 + FLAM_C SINE Alu 1 110 -33 248 53 26 0 chr18 4551394 4551432 -82126116 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 498 276 126 0 chr18 4552349 4552563 -82124985 - MIR SINE MIR -1 261 21 23 0 0 0 chr18 4554307 4554330 -82123218 + AT_rich Low_complexity Low_complexity 1 23 0 2275 110 13 0 chr18 4554674 4554974 -82122574 + AluSx SINE Alu 1 304 -8 1895 128 44 17 chr18 4555164 4555345 -82122203 - AluSg SINE Alu -4 306 112 396 0 0 0 chr18 4555345 4555389 -82122159 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1895 128 44 17 chr18 4555389 4555505 -82122043 - AluSg SINE Alu -198 112 1 2503 72 3 0 chr18 4556173 4556479 -82121069 - AluSp SINE Alu -6 307 1 2177 87 4 4 chr18 4556479 4556756 -82120792 - AluSq SINE Alu -36 277 1 2250 102 0 7 chr18 4557051 4557354 -82120194 - AluSg SINE Alu -9 301 1 371 251 74 0 chr18 4557374 4557500 -82120048 - MIR SINE MIR -65 143 13 1825 154 3 7 chr18 4558028 4558326 -82119222 + AluSg SINE Alu 1 297 -13 2140 131 0 3 chr18 4558597 4558895 -82118653 - AluSx SINE Alu -13 299 3 180 0 0 0 chr18 4560741 4560761 -82116787 + (T)n Simple_repeat Simple_repeat 1 20 0 28 0 0 0 chr18 4561458 4561486 -82116062 + AT_rich Low_complexity Low_complexity 1 28 0 2071 115 0 14 chr18 4561493 4561781 -82115767 + AluJb SINE Alu 1 284 -28 300 276 26 26 chr18 4567099 4567215 -82110333 - MIR SINE MIR -75 133 18 2258 104 0 13 chr18 4567324 4567622 -82109926 + AluSx SINE Alu 1 294 -18 351 0 0 0 chr18 4569342 4569381 -82108167 + (TG)n Simple_repeat Simple_repeat 2 40 0 185 258 86 32 chr18 4570281 4570374 -82107174 + L3b LINE CR1 1278 1375 -208 1070 217 21 0 chr18 4570822 4571057 -82106491 + MIR SINE MIR 13 252 -10 240 35 0 0 chr18 4571064 4571093 -82106455 + (TTA)n Simple_repeat Simple_repeat 3 31 0 196 298 119 0 chr18 4571177 4571261 -82106287 - MIR SINE MIR -137 125 32 587 266 71 28 chr18 4571515 4571881 -82105667 - L1MC4a LINE L1 -302 5819 5536 339 85 0 0 chr18 4571957 4572004 -82105544 + (A)n Simple_repeat Simple_repeat 1 47 0 2217 68 32 45 chr18 4572004 4572315 -82105233 + AluY SINE Alu 1 307 -4 794 81 7 40 chr18 4572649 4572798 -82104750 + (TTC)n Simple_repeat Simple_repeat 1 144 0 1893 176 17 6 chr18 4572851 4573210 -82104338 + L1PA16 LINE L1 5804 6166 0 2241 94 19 10 chr18 4573220 4573527 -82104021 + AluSg SINE Alu 1 310 0 1168 56 17 17 chr18 4573540 4573720 -82103828 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2037 136 13 7 chr18 4573730 4574038 -82103510 + AluSq SINE Alu 1 310 -3 2331 100 3 0 chr18 4574048 4574349 -82103199 + AluSg SINE Alu 1 302 -8 186 43 0 0 chr18 4574369 4574392 -82103156 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1245 171 167 0 chr18 4574553 4574805 -82102743 + L1PB3 LINE L1 5861 6154 0 39 15 0 46 chr18 4575035 4575100 -82102448 + AT_rich Low_complexity Low_complexity 1 62 0 2197 134 0 3 chr18 4576279 4576592 -82100956 - AluSq SINE Alu -1 312 1 778 171 8 0 chr18 4577712 4577841 -82099707 - FLAM_A SINE Alu -3 130 1 2145 121 7 23 chr18 4577956 4578262 -82099286 + AluSx SINE Alu 1 301 -11 2309 112 0 0 chr18 4578262 4578557 -82098991 + AluSx SINE Alu 1 295 -17 2232 126 0 3 chr18 4579498 4579808 -82097740 + AluSx SINE Alu 1 309 -3 246 207 0 0 chr18 4579862 4579920 -82097628 + (TA)n Simple_repeat Simple_repeat 2 59 0 1320 241 66 48 chr18 4580708 4581023 -82096525 - MER39 LTR ERV1 0 707 380 1498 129 91 45 chr18 4581023 4581310 -82096238 + AluJo SINE Alu 1 300 -12 1320 241 66 48 chr18 4581310 4581434 -82096114 - MER39 LTR ERV1 -327 380 260 243 164 68 82 chr18 4581417 4581490 -82096058 - LTR48B LTR ERV1 -552 92 21 * 1787 190 7 0 chr18 4581833 4582133 -82095415 + AluJo SINE Alu 1 302 -10 182 285 16 81 chr18 4582315 4582438 -82095110 - MIR SINE MIR -110 152 38 1014 154 8 2 chr18 4582569 4582816 -82094732 + AluJb SINE Alu 2 303 -9 221 305 67 19 chr18 4582860 4582965 -82094583 - MIR SINE MIR -48 214 105 1882 151 0 4 chr18 4583077 4583355 -82094193 - AluJb SINE Alu -35 277 1 409 305 70 38 chr18 4583843 4584230 -82093318 - MLT1L LTR MaLR -167 421 5 432 158 26 0 chr18 4584962 4585038 -82092510 + MER45B DNA AcHobo 503 580 -460 336 300 30 0 chr18 4585182 4585282 -82092266 + MER45B DNA AcHobo 1 103 -937 * 986 100 0 0 chr18 4585273 4585403 -82092145 - Tigger1 DNA MER2_type -337 2081 1952 262 86 0 0 chr18 4585403 4585438 -82092110 + THE1A LTR MaLR 1 35 -320 2465 70 3 0 chr18 4585438 4585737 -82091811 - AluSc SINE Alu -9 300 1 237 183 139 35 chr18 4585792 4585907 -82091641 + Charlie7 DNA MER1_type 2473 2599 -13 * 296 100 0 0 chr18 4585902 4585942 -82091606 - Alu SINE Alu -261 40 1 * 1931 88 62 88 chr18 4585942 4586218 -82091330 + THE1B LTR MaLR 28 310 -54 2085 110 3 3 chr18 4586218 4586520 -82091028 + AluSq SINE Alu 1 302 0 2329 97 0 0 chr18 4586524 4586822 -82090726 + AluSx SINE Alu 1 298 -14 1931 88 62 88 chr18 4586822 4586885 -82090663 + THE1B LTR MaLR 313 364 0 364 134 0 60 chr18 4586885 4586952 -82090596 - Tigger1 DNA MER2_type -462 1956 1894 1570 101 0 0 chr18 4586952 4587159 -82090389 - AluSq SINE Alu -4 309 103 817 88 0 0 chr18 4587236 4587338 -82090210 - AluSq SINE Alu -211 102 1 12395 121 15 21 chr18 4587339 4587963 -82089585 - Tigger1 DNA MER2_type -525 1893 1267 2220 89 7 0 chr18 4587963 4588244 -82089304 + AluY SINE Alu 15 297 -14 12395 121 15 21 chr18 4588244 4588930 -82088618 - Tigger1 DNA MER2_type -1151 1267 578 2233 106 0 10 chr18 4588930 4589242 -82088306 + AluSx SINE Alu 1 309 -3 12395 121 15 21 chr18 4589242 4589610 -82087938 - Tigger1 DNA MER2_type -1840 578 225 2121 120 7 3 chr18 4589610 4589918 -82087630 + AluSg SINE Alu 1 309 -1 12395 121 15 21 chr18 4589918 4590129 -82087419 - Tigger1 DNA MER2_type -2193 225 14 2173 203 70 25 chr18 4590146 4590303 -82087245 + MER45B DNA AcHobo 487 635 -946 1865 145 25 3 chr18 4590303 4590585 -82086963 + AluJo SINE Alu 7 294 -18 1947 153 7 0 chr18 4590592 4590899 -82086649 + AluSx SINE Alu 1 309 -3 2173 203 70 25 chr18 4590899 4591261 -82086287 + MER45B DNA AcHobo 640 1038 -2 2339 117 0 0 chr18 4591496 4591804 -82085744 - AluSx SINE Alu -4 308 1 1954 125 0 60 chr18 4592303 4592622 -82084926 - AluSx SINE Alu -12 300 1 258 333 63 0 chr18 4592864 4592975 -82084573 - MIR3 SINE MIR -14 194 77 2549 66 0 3 chr18 4593192 4593495 -82084053 + AluSg SINE Alu 1 302 -8 244 273 64 36 chr18 4593938 4594048 -82083500 - MIR SINE MIR -54 208 96 1853 158 7 20 chr18 4594092 4594389 -82083159 - AluSx SINE Alu -19 293 1 1655 123 58 55 chr18 4594562 4594686 -82082862 + AluJo SINE Alu 1 123 -189 2290 93 7 0 chr18 4594686 4594977 -82082571 - AluSp SINE Alu -20 293 1 1655 123 58 55 chr18 4594977 4595145 -82082403 + AluJo SINE Alu 123 294 -18 237 277 152 0 chr18 4596705 4596817 -82080731 + MIR SINE MIR 74 202 -60 26 30 0 0 chr18 4596832 4596865 -82080683 + AT_rich Low_complexity Low_complexity 1 33 0 2096 128 7 0 chr18 4596986 4597275 -82080273 - AluSx SINE Alu -21 291 1 513 95 74 32 chr18 4597308 4597403 -82080145 - L1MA8 LINE L1 -3 6288 6190 2500 36 0 0 chr18 4597470 4597791 -82079757 - AluY SINE Alu 0 321 1 1502 134 0 0 chr18 4597801 4598010 -82079538 - AluJo SINE Alu -20 292 84 1788 171 18 0 chr18 4598109 4598390 -82079158 + AluJo SINE Alu 1 286 -26 2185 118 0 13 chr18 4598776 4599082 -82078466 + AluSx SINE Alu 1 302 -10 315 296 123 25 chr18 4600021 4600183 -82077365 + MER5B DNA MER1_type 1 178 0 1633 259 89 73 chr18 4600218 4602067 -82075481 + L1ME LINE L1 10 1827 -4253 300 26 0 0 chr18 4602067 4602105 -82075443 + L1PB4 LINE L1 6113 6150 -6 2194 124 0 7 chr18 4602105 4602411 -82075137 + AluSx SINE Alu 1 304 -8 1633 259 89 73 chr18 4602411 4602797 -82074751 + L1ME LINE L1 1826 2255 -3825 29 0 0 0 chr18 4604683 4604712 -82072836 + AT_rich Low_complexity Low_complexity 1 29 0 2508 75 3 0 chr18 4609008 4609316 -82068232 - AluSp SINE Alu -4 309 1 853 117 0 36 chr18 4609484 4609621 -82067927 + FLAM_C SINE Alu 2 133 0 180 0 0 0 chr18 4611735 4611755 -82065793 + (CGGGGG)n Simple_repeat Simple_repeat 5 24 0 232 169 56 14 chr18 4612580 4612651 -82064897 + C-rich Low_complexity Low_complexity 3 76 0 252 0 0 0 chr18 4613982 4614010 -82063538 + (A)n Simple_repeat Simple_repeat 1 28 0 2335 106 0 0 chr18 4616245 4616546 -82061002 + AluSx SINE Alu 1 301 -11 186 103 0 0 chr18 4616941 4616970 -82060578 + (T)n Simple_repeat Simple_repeat 1 29 0 2691 58 0 0 chr18 4616976 4617287 -82060261 - AluY SINE Alu 0 311 1 289 296 77 39 chr18 4617452 4617600 -82059948 + L2 LINE L2 2948 3110 -203 957 177 13 78 chr18 4617600 4617832 -82059716 - MER20 DNA MER1_type 0 219 3 289 296 77 39 chr18 4617832 4617916 -82059632 + L2 LINE L2 3110 3189 -124 42 57 0 0 chr18 4617944 4618014 -82059534 + AT_rich Low_complexity Low_complexity 1 70 0 524 135 0 0 chr18 4618021 4618110 -82059438 + AluS SINE Alu 224 312 0 221 268 71 0 chr18 4618123 4618179 -82059369 + L2 LINE L2 3252 3311 -2 1397 86 72 0 chr18 4618195 4618416 -82059132 + L1PA14 LINE L1 5922 6158 -3 2272 89 3 35 chr18 4618469 4618782 -82058766 + AluSg SINE Alu 1 303 -7 192 291 58 0 chr18 4618788 4618874 -82058674 - MIR SINE MIR -12 250 160 945 88 0 0 chr18 4618879 4618992 -82058556 + AluSq/x SINE Alu 1 113 -199 656 97 78 10 chr18 4619023 4619126 -82058422 + AluSp/q SINE Alu 183 292 -21 528 168 11 11 chr18 4619206 4619301 -82058247 + FRAM SINE Alu 66 160 -16 240 306 0 0 chr18 4619302 4619364 -82058184 - MIR SINE MIR -108 154 93 586 254 108 56 chr18 4619613 4619983 -82057565 - L1ME LINE L1 -428 5693 5295 704 150 9 9 chr18 4619989 4620102 -82057446 - FLAM_C SINE Alu -24 119 7 422 266 33 49 chr18 4620450 4620694 -82056854 + L1M4 LINE L1 4381 4620 -1526 1128 170 9 54 chr18 4621088 4621312 -82056236 + MER20 DNA MER1_type 2 215 -4 320 163 82 61 chr18 4621927 4622025 -82055523 - L1ME LINE L1 -302 5819 5720 1906 134 4 4 chr18 4622343 4622620 -82054928 - AluSx SINE Alu -13 299 23 1870 160 0 0 chr18 4622673 4622973 -82054575 - AluJb SINE Alu -12 300 1 23 0 0 0 chr18 4623040 4623063 -82054485 + AT_rich Low_complexity Low_complexity 1 23 0 2137 99 20 0 chr18 4623069 4623361 -82054187 + AluSp SINE Alu 1 298 -15 669 193 27 48 chr18 4623430 4623617 -82053931 - L1MC5 LINE L1 -30 7931 7749 333 47 0 0 chr18 4624083 4624126 -82053422 + (TG)n Simple_repeat Simple_repeat 1 43 0 2420 78 0 0 chr18 4624616 4624910 -82052638 - AluSq SINE Alu -19 294 1 2163 133 0 0 chr18 4625580 4625889 -82051659 - AluSx SINE Alu -3 309 1 2128 95 21 0 chr18 4625892 4626175 -82051373 - AluSx SINE Alu -23 289 1 865 184 0 13 chr18 4626685 4626837 -82050711 + FRAM SINE Alu 1 150 -26 2168 84 3 20 chr18 4627214 4627512 -82050036 + AluSx SINE Alu 1 293 -19 2075 109 6 48 chr18 4627983 4628146 -82049402 - AluSx SINE Alu -14 298 153 2347 103 3 0 chr18 4628146 4628457 -82049091 - AluSp SINE Alu -1 312 1 2075 109 6 48 chr18 4628457 4628604 -82048944 - AluSx SINE Alu -159 153 1 849 142 0 37 chr18 4628791 4628953 -82048595 - L1MB3 LINE L1 0 6183 6028 434 222 0 0 chr18 4628953 4629034 -82048514 + AluJ/FRAM SINE Alu 214 294 -18 298 237 0 0 chr18 4629035 4629111 -82048437 - L1MB4 LINE L1 -147 6033 5958 809 158 14 0 chr18 4629145 4629284 -82048264 - L1MB4 LINE L1 -225 5955 5815 2019 140 0 19 chr18 4629338 4629653 -82047895 + AluSx SINE Alu 1 309 -3 2429 72 3 0 chr18 4629653 4629957 -82047591 + AluSp SINE Alu 1 305 -8 273 273 64 36 chr18 4630400 4630510 -82047038 - MIR SINE MIR -54 208 96 1828 159 7 20 chr18 4630554 4630850 -82046698 - AluSx SINE Alu -20 292 1 1640 123 58 55 chr18 4631023 4631147 -82046401 + AluJo SINE Alu 1 123 -189 2268 93 7 0 chr18 4631147 4631438 -82046110 - AluSp SINE Alu -20 293 1 1640 123 58 55 chr18 4631438 4631606 -82045942 + AluJo SINE Alu 123 294 -18 272 270 157 0 chr18 4633164 4633279 -82044269 + MIR SINE MIR 70 202 -60 26 30 0 0 chr18 4633294 4633327 -82044221 + AT_rich Low_complexity Low_complexity 1 33 0 2060 132 7 0 chr18 4633448 4633737 -82043811 - AluSx SINE Alu -21 291 1 536 95 74 32 chr18 4633770 4633865 -82043683 - L1MA8 LINE L1 -3 6288 6190 2445 43 0 0 chr18 4633932 4634248 -82043300 - AluY SINE Alu 0 316 1 1489 134 0 0 chr18 4634258 4634467 -82043081 - AluJo SINE Alu -20 292 84 1772 171 18 0 chr18 4634566 4634847 -82042701 + AluJo SINE Alu 1 286 -26 2137 121 0 13 chr18 4635233 4635539 -82042009 + AluSx SINE Alu 1 302 -10 331 274 0 0 chr18 4636478 4636551 -82040997 + MER5B DNA MER1_type 1 73 -105 201 45 45 23 chr18 4636551 4636595 -82040953 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 293 174 0 0 chr18 4636595 4636641 -82040907 + MER5B DNA MER1_type 133 178 0 1766 259 94 71 chr18 4636676 4638515 -82039033 + L1ME4a LINE L1 10 1805 -4275 313 26 0 0 chr18 4638515 4638553 -82038995 + L1PB4 LINE L1 6113 6150 -6 2175 124 0 7 chr18 4638553 4638859 -82038689 + AluSx SINE Alu 1 304 -8 1766 259 94 71 chr18 4638859 4639245 -82038303 + L1ME4a LINE L1 1804 2255 -3825 29 0 0 0 chr18 4641131 4641160 -82036388 + AT_rich Low_complexity Low_complexity 1 29 0 2474 75 3 0 chr18 4645457 4645764 -82031784 - AluSp SINE Alu -5 308 1 1523 177 0 20 chr18 4646008 4646308 -82031240 + AluSg1 SINE Alu 1 294 -15 276 237 101 79 chr18 4646390 4646529 -82031019 - LTR50 LTR ERVL -636 159 18 2370 58 0 0 chr18 4647463 4647791 -82029757 + AluY SINE Alu 7 334 0 308 297 94 25 chr18 4647983 4648343 -82029205 + L1ME4a LINE L1 2684 3068 -3012 1585 201 16 3 chr18 4648569 4648877 -82028671 + AluJo SINE Alu 1 312 0 2232 113 0 0 chr18 4649057 4649349 -82028199 - AluSq SINE Alu -19 294 3 302 314 42 8 chr18 4649355 4649473 -82028075 + L1ME4a LINE L1 3557 3678 -2402 25 0 0 0 chr18 4649493 4649518 -82028030 + AT_rich Low_complexity Low_complexity 1 25 0 460 255 0 0 chr18 4649527 4649629 -82027919 + U13 snRNA snRNA 1 102 -2 2160 116 0 7 chr18 4649822 4650147 -82027401 + AluSx SINE Alu 1 323 0 1038 68 0 0 chr18 4650367 4650500 -82027048 + AluSp/q SINE Alu 175 307 -6 232 294 46 13 chr18 4650506 4650659 -82026889 + L1ME4a LINE L1 4189 4346 -1734 2077 76 4 7 chr18 4650746 4651021 -82026527 + AluSc SINE Alu 1 274 -35 205 143 0 41 chr18 4651036 4651065 -82026483 + (TAAA)n Simple_repeat Simple_repeat 2 30 -18 1693 190 3 0 chr18 4651065 4651355 -82026193 + 7SLRNA srpRNA srpRNA 6 296 -24 205 143 0 41 chr18 4651355 4651374 -82026174 + (TAAA)n Simple_repeat Simple_repeat 30 48 0 2045 118 9 37 chr18 4651605 4651926 -82025622 - AluJo SINE Alu 0 312 1 1940 127 0 0 chr18 4652024 4652291 -82025257 + AluSx SINE Alu 31 297 -15 1745 151 35 111 chr18 4652360 4652730 -82024818 - Tigger3(Golem) DNA MER2_type -6 3023 1 236 328 38 27 chr18 4653085 4653268 -82024280 + L1ME4a LINE L1 5131 5315 -765 2228 90 4 0 chr18 4653275 4653580 -82023968 + AluSg SINE Alu 3 308 0 2292 82 0 0 chr18 4653587 4653869 -82023679 + AluY SINE Alu 1 282 -29 22 0 0 0 chr18 4653887 4653909 -82023639 + AT_rich Low_complexity Low_complexity 1 22 0 2047 120 10 0 chr18 4654374 4654665 -82022883 + AluSx SINE Alu 1 294 -18 388 0 39 0 chr18 4655476 4655528 -82022020 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 283 327 45 9 chr18 4655709 4655819 -82021729 + L2 LINE L2 3154 3267 -5 279 211 32 21 chr18 4656103 4656198 -82021350 + (TA)n Simple_repeat Simple_repeat 1 96 0 282 56 0 0 chr18 4656200 4656236 -82021312 - MADE1 DNA Mariner -44 36 1 417 289 113 32 chr18 4656264 4656575 -82020973 + L1ME4a LINE L1 5482 5817 -238 2248 93 0 34 chr18 4656697 4657019 -82020529 - AluSx SINE Alu -1 311 1 4382 149 4 20 chr18 4657569 4658285 -82019263 - L1MB3 LINE L1 -2 6181 5477 225 94 0 0 chr18 4658876 4658908 -82018640 + (A)n Simple_repeat Simple_repeat 1 32 0 2150 131 0 10 chr18 4660683 4660995 -82016553 + AluSx SINE Alu 1 309 -3 1841 120 0 26 chr18 4661230 4661496 -82016052 - AluSp SINE Alu -54 259 1 831 171 8 0 chr18 4661611 4661740 -82015808 + FLAM_A SINE Alu 1 130 -3 198 273 253 40 chr18 4662441 4662591 -82014957 + MER5A DNA MER1_type 8 189 0 945 80 0 0 chr18 4662860 4662973 -82014575 + AluSq/x SINE Alu 1 113 -199 700 97 78 10 chr18 4663004 4663107 -82014441 + AluSp/q SINE Alu 183 292 -21 565 168 11 11 chr18 4663187 4663282 -82014266 + FRAM SINE Alu 66 160 -16 256 306 0 0 chr18 4663283 4663345 -82014203 - MIR SINE MIR -108 154 93 604 264 102 49 chr18 4663594 4663964 -82013584 - L1ME LINE L1 -428 5693 5295 755 150 9 9 chr18 4663970 4664083 -82013465 - FLAM_C SINE Alu -24 119 7 437 294 46 55 chr18 4664431 4664758 -82012790 + L1M4 LINE L1 4381 4704 -1442 1081 167 9 54 chr18 4665069 4665291 -82012257 + MER20 DNA MER1_type 2 213 -6 320 163 82 61 chr18 4665909 4666007 -82011541 - L1ME LINE L1 -302 5819 5720 2253 107 0 3 chr18 4666325 4666625 -82010923 - AluSx SINE Alu -13 299 1 204 97 0 0 chr18 4666823 4666854 -82010694 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 2277 107 0 10 chr18 4667264 4667573 -82009975 - AluSq SINE Alu -7 306 1 1529 173 147 23 chr18 4667686 4667992 -82009556 - MER2 DNA MER2_type 0 344 1 443 302 115 39 chr18 4668010 4668374 -82009174 + MLT1J LTR MaLR 102 493 -18 983 118 0 0 chr18 4668405 4668532 -82009016 - FLAM_C SINE Alu -6 127 1 472 291 57 105 chr18 4668542 4668894 -82008654 - L1ME4a LINE L1 -3 6118 5800 2119 121 0 0 chr18 4668894 4669183 -82008365 + AluSx SINE Alu 6 294 -18 472 291 57 105 chr18 4669183 4669373 -82008175 - L1ME4a LINE L1 -321 5800 5602 2105 121 3 3 chr18 4669393 4669700 -82007848 - AluSx SINE Alu -5 307 1 2104 119 14 0 chr18 4669817 4670111 -82007437 - AluSx SINE Alu -14 298 1 249 306 160 21 chr18 4671303 4671447 -82006101 - L1ME LINE L1 -484 5637 5474 606 176 15 76 chr18 4671447 4671578 -82005970 - FLAM_A SINE Alu -14 128 6 196 270 0 0 chr18 4671996 4672033 -82005515 + MIR SINE MIR 19 55 -207 294 275 43 22 chr18 4672141 4672279 -82005269 + L1M4 LINE L1 4109 4249 -1897 537 309 18 0 chr18 4672298 4672463 -82005085 + MIR SINE MIR 79 246 -16 809 143 8 0 chr18 4672640 4672759 -82004789 - FLAM_C SINE Alu -22 121 2 283 310 10 0 chr18 4673369 4673469 -82004079 + AluSp/q SINE Alu 203 303 0 780 172 22 15 chr18 4673494 4673628 -82003920 - AluJo SINE Alu -176 136 2 2041 127 7 10 chr18 4673776 4674083 -82003465 + AluSx SINE Alu 1 306 -6 2246 178 98 17 chr18 4674673 4675140 -82002408 + MLT1D LTR MaLR 1 505 0 747 280 160 12 chr18 4675140 4675540 -82002008 + Charlie7 DNA MER1_type 265 723 -1889 2611 23 0 10 chr18 4675792 4676093 -82001455 - AluY SINE Alu -13 298 1 272 211 0 0 chr18 4676093 4676145 -82001403 + MER63 DNA MER1_type 181 232 -829 1277 193 120 4 chr18 4676308 4676582 -82000966 + MER63 DNA MER1_type 756 1061 0 369 93 0 0 chr18 4677570 4677624 -81999924 + (CA)n Simple_repeat Simple_repeat 2 55 0 2377 82 0 3 chr18 4677750 4678053 -81999495 - AluSc SINE Alu -7 302 1 746 291 47 86 chr18 4678056 4678359 -81999189 + L2 LINE L2 2817 3093 -220 647 196 0 72 chr18 4678359 4678497 -81999051 - FLAM_A SINE Alu -5 128 1 746 291 47 86 chr18 4678497 4678705 -81998843 + L2 LINE L2 3093 3308 -5 200 306 56 0 chr18 4679024 4679096 -81998452 + L2 LINE L2 2517 2592 -722 669 236 16 0 chr18 4679262 4679385 -81998163 - FLAM_A SINE Alu -7 126 2 979 234 95 7 chr18 4679449 4679723 -81997825 + MLT1H1 LTR MaLR 8 305 -250 180 0 0 0 chr18 4679761 4679781 -81997767 + (T)n Simple_repeat Simple_repeat 1 20 0 2815 218 61 22 chr18 4679892 4680981 -81996567 - L1MDa LINE L1 -3039 3501 2379 2280 101 3 3 chr18 4680981 4681279 -81996269 - AluSq SINE Alu -12 301 4 2815 218 61 22 chr18 4681279 4681322 -81996226 - L1MDa LINE L1 -4161 2379 2339 2263 91 0 20 chr18 4681422 4681719 -81995829 + AluSg SINE Alu 8 298 -12 1559 154 12 15 chr18 4681732 4681991 -81995557 + AluJo SINE Alu 53 310 -2 199 137 59 78 chr18 4682083 4682134 -81995414 + MIR SINE MIR 211 260 -2 231 256 45 126 chr18 4682311 4682534 -81995014 - L2 LINE L2 -182 3090 2886 468 359 47 35 chr18 4682716 4682747 -81994801 - L2 LINE L2 -727 2587 2558 3747 127 19 11 chr18 4682747 4683315 -81994233 + L1PA16 LINE L1 5594 6166 0 468 359 47 35 chr18 4683315 4683821 -81993727 - L2 LINE L2 -756 2558 2044 2218 105 10 13 chr18 4683825 4684138 -81993410 + AluSx SINE Alu 1 312 0 279 79 0 0 chr18 4684140 4684178 -81993370 + (GGA)n Simple_repeat Simple_repeat 3 40 0 636 153 81 18 chr18 4686087 4686198 -81991350 - FLAM_C SINE Alu -15 118 1 298 173 4 15 chr18 4686498 4686582 -81990966 - L1P5 LINE L1 -720 5436 5353 423 307 57 16 chr18 4686589 4686833 -81990715 - L1M4 LINE L1 -777 5369 5116 341 309 49 59 chr18 4687070 4687283 -81990265 - L1M4 LINE L1 -1194 4952 4741 2211 123 3 0 chr18 4687283 4687593 -81989955 + AluSx SINE Alu 1 311 -1 341 309 49 59 chr18 4687593 4687683 -81989865 - L1M4 LINE L1 -1405 4741 4652 2133 170 52 44 chr18 4687891 4688386 -81989162 - L1MB8 LINE L1 0 6178 5680 1955 112 54 0 chr18 4688431 4688707 -81988841 + AluSx SINE Alu 6 296 -16 435 301 151 35 chr18 4688710 4689239 -81988309 - L1M4 LINE L1 -1527 4619 4026 2050 135 3 7 chr18 4689322 4689618 -81987930 + AluSx SINE Alu 1 295 -17 2495 63 0 0 chr18 4689618 4689917 -81987631 + AluY SINE Alu 1 299 -12 21 71 0 0 chr18 4689917 4689959 -81987589 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr18 4690277 4690322 -81987226 + (GGAA)n Simple_repeat Simple_repeat 1 45 0 1630 139 0 16 chr18 4691189 4691441 -81986107 + AluSx SINE Alu 61 308 -4 220 393 7 13 chr18 4691445 4691595 -81985953 - L2 LINE L2 -572 2742 2594 627 239 174 0 chr18 4692963 4693164 -81984384 + MIR SINE MIR 11 246 -16 374 261 148 7 chr18 4693509 4693651 -81983897 + MIR SINE MIR 31 192 -70 1348 97 11 0 chr18 4694932 4695117 -81982431 + L1MA3 LINE L1 6119 6305 0 2297 84 0 0 chr18 4695122 4695407 -81982141 + AluY SINE Alu 21 305 -6 2087 172 27 0 chr18 4696278 4696616 -81980932 - MER7A DNA MER2_type -1 345 1 239 278 0 0 chr18 4697203 4697257 -81980291 - MLT1C LTR MaLR 0 467 414 * 518 208 19 0 chr18 4697254 4697360 -81980188 - MLT1C LTR MaLR -359 108 1 474 250 0 0 chr18 4698342 4698446 -81979102 - U13 snRNA snRNA 0 104 1 2105 126 0 0 chr18 4698657 4698943 -81978605 + AluJb SINE Alu 1 286 -26 223 240 0 0 chr18 4700410 4700460 -81977088 + MIR SINE MIR 72 121 -141 1294 69 0 13 chr18 4702006 4702165 -81975383 + L1PA10 LINE L1 5999 6155 -13 456 290 74 11 chr18 4702207 4702383 -81975165 - MIR SINE MIR -29 233 47 203 59 0 29 chr18 4703517 4703551 -81973997 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 299 256 33 22 chr18 4703810 4703900 -81973648 + L3b LINE CR1 1315 1405 -178 297 301 0 21 chr18 4704551 4704644 -81972904 + MIR SINE MIR 168 258 -4 184 325 241 0 chr18 4704669 4704752 -81972796 - L2 LINE L2 -29 3243 3141 1914 133 39 0 chr18 4705478 4705757 -81971791 + AluSx SINE Alu 1 290 -22 423 0 0 0 chr18 4705758 4705805 -81971743 + (TA)n Simple_repeat Simple_repeat 1 47 0 767 257 23 0 chr18 4706584 4706755 -81970793 - MER63A DNA MER1_type -35 175 1 379 292 156 0 chr18 4706792 4706946 -81970602 - MIR3 SINE MIR 0 208 31 2213 98 0 0 chr18 4707483 4707795 -81969753 + AluSg SINE Alu 4 315 0 593 236 208 0 chr18 4708078 4708294 -81969254 - MIR SINE MIR 0 262 2 2550 157 34 5 chr18 4708481 4708894 -81968654 + MSTB LTR MaLR 1 425 -1 452 310 0 6 chr18 4709214 4709372 -81968176 - L1MC4a LINE L1 -1902 5906 5750 2114 116 17 10 chr18 4710593 4710895 -81966653 + AluSg SINE Alu 2 305 -5 25 75 0 0 chr18 4710927 4710980 -81966568 + AT_rich Low_complexity Low_complexity 1 53 0 2229 120 87 3 chr18 4711632 4711966 -81965582 - THE1B LTR MaLR -2 362 1 1621 181 64 39 chr18 4712219 4712412 -81965136 - MLT1A2 LTR MaLR -5 369 161 2088 104 30 3 chr18 4712412 4712710 -81964838 - AluSc SINE Alu -3 306 1 1621 181 64 39 chr18 4712710 4712876 -81964672 - MLT1A2 LTR MaLR -213 161 1 665 136 0 18 chr18 4714008 4714118 -81963430 + FLAM_A SINE Alu 30 137 -5 2492 76 0 0 chr18 4714148 4714452 -81963096 + AluSc SINE Alu 1 304 -5 717 285 170 16 chr18 4715695 4716278 -81961270 - L2 LINE L2 -1 3312 2644 430 281 208 8 chr18 4716283 4716543 -81961005 - L2 LINE L2 -532 2782 2471 1924 124 50 14 chr18 4717280 4717563 -81959985 - AluSx SINE Alu -19 293 1 1095 149 0 12 chr18 4717829 4717997 -81959551 - FRAM SINE Alu -11 165 1 243 146 0 0 chr18 4718210 4718251 -81959297 + (CA)n Simple_repeat Simple_repeat 2 42 0 2015 152 3 3 chr18 4719194 4719504 -81958044 + AluJo SINE Alu 1 310 -2 489 335 51 19 chr18 4719988 4720358 -81957190 + L2 LINE L2 1894 2275 -1039 259 284 62 86 chr18 4720589 4720751 -81956797 + L2 LINE L2 3111 3268 -4 235 308 0 26 chr18 4720919 4721036 -81956512 - L1ME LINE L1 -209 5912 5799 273 211 66 26 chr18 4721499 4721575 -81955973 - MIR3 SINE MIR -5 203 125 1561 214 116 16 chr18 4721588 4722028 -81955520 - LTR48B LTR ERV1 -160 484 1 2358 110 3 0 chr18 4722251 4722560 -81954988 - AluSg SINE Alu 0 310 1 1460 161 51 65 chr18 4723498 4723834 -81953714 + MLT1D LTR MaLR 1 331 -174 2260 181 99 36 chr18 4723844 4724431 -81953117 + LTR48B LTR ERV1 21 644 0 979 176 11 11 chr18 4724431 4724617 -81952931 + MLT1D LTR MaLR 320 505 0 304 248 41 16 chr18 4724799 4724920 -81952628 - L2 LINE L2 -375 2939 2816 4415 173 46 8 chr18 4725956 4726958 -81950590 - L1MB7 LINE L1 0 6184 5140 2358 91 3 0 chr18 4727324 4727620 -81949928 + AluSx SINE Alu 1 297 -15 185 65 32 0 chr18 4727765 4727796 -81949752 + (CAA)n Simple_repeat Simple_repeat 2 33 0 2107 90 10 14 chr18 4728119 4728408 -81949140 + AluSq SINE Alu 13 300 -13 404 263 78 60 chr18 4728428 4728632 -81948916 + L1MC4a LINE L1 5744 5956 -165 1486 158 3 89 chr18 4728632 4728948 -81948600 + AluJo SINE Alu 1 289 -23 404 263 78 60 chr18 4728948 4728960 -81948588 + L1MC4a LINE L1 5956 5966 -155 2106 200 58 40 chr18 4729016 4729512 -81948036 + MLT1D LTR MaLR 1 505 0 22 35 0 0 chr18 4729613 4729642 -81947906 + AT_rich Low_complexity Low_complexity 1 29 0 2209 101 16 10 chr18 4729672 4729978 -81947570 + AluSx SINE Alu 1 308 -4 233 325 94 17 chr18 4730082 4730199 -81947349 - L2 LINE L2 -226 3046 2921 925 102 8 0 chr18 4730384 4730528 -81947020 + FLAM_C SINE Alu 1 145 0 2285 102 0 0 chr18 4731307 4731601 -81945947 - AluSq SINE Alu -19 294 1 1677 174 25 11 chr18 4732673 4732955 -81944593 + AluJb SINE Alu 1 286 -26 22 35 0 0 chr18 4732955 4732984 -81944564 + AT_rich Low_complexity Low_complexity 1 29 0 239 0 32 0 chr18 4733002 4733033 -81944515 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 680 237 96 0 chr18 4733841 4734018 -81943530 + L1ME3A LINE L1 5918 6111 -59 2059 197 75 75 chr18 4734018 4734118 -81943430 - LTR48B LTR ERV1 0 644 545 2197 147 132 8 chr18 4734118 4734498 -81943050 - MSTA LTR MaLR 0 428 2 2059 197 75 75 chr18 4734498 4735041 -81942507 - LTR48B LTR ERV1 -98 546 1 27 0 0 0 chr18 4736633 4736660 -81940888 + AT_rich Low_complexity Low_complexity 1 27 0 650 217 130 0 chr18 4736893 4737052 -81940496 - MER5A DNA MER1_type -6 183 1 218 245 38 19 chr18 4737062 4737115 -81940433 - MER5B DNA MER1_type -71 107 54 23 0 0 0 chr18 4737115 4737138 -81940410 + AT_rich Low_complexity Low_complexity 1 23 0 973 104 11 27 chr18 4737277 4737351 -81940197 + (GAAA)n Simple_repeat Simple_repeat 1 252 0 973 104 11 27 chr18 4737351 4737534 -81940014 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 402 266 112 18 chr18 4737922 4738091 -81939457 + MIR3 SINE MIR 23 207 -1 21 0 0 0 chr18 4739789 4739810 -81937738 + AT_rich Low_complexity Low_complexity 1 21 0 9921 204 78 30 chr18 4739810 4743907 -81933641 - L1MD1 LINE L1 0 6636 2363 2280 101 3 3 chr18 4743907 4744205 -81933343 - AluSq SINE Alu -12 301 4 9921 204 78 30 chr18 4744205 4744313 -81933235 - L1MD1 LINE L1 -4273 2363 2262 2431 74 6 13 chr18 4744330 4744641 -81932907 + AluY SINE Alu 1 309 -2 350 362 172 13 chr18 4744960 4745490 -81932058 + L3 LINE CR1 75 688 -889 272 192 80 113 chr18 4745561 4745712 -81931836 + MIR SINE MIR 117 262 0 2170 119 7 0 chr18 4745797 4746099 -81931449 + AluSq SINE Alu 1 304 -9 2307 144 59 30 chr18 4746235 4746752 -81930796 - MLT2A2 LTR ERVL 0 554 1 625 331 70 7 chr18 4746770 4747072 -81930476 + L3 LINE CR1 982 1302 -275 3068 167 22 13 chr18 4747837 4747885 -81929663 + L1MB3 LINE L1 5629 5675 -508 2352 110 0 0 chr18 4747885 4748195 -81929353 + AluSg SINE Alu 1 310 0 3068 167 22 13 chr18 4748195 4748691 -81928857 + L1MB3 LINE L1 5675 6178 -5 190 246 123 0 chr18 4748744 4748801 -81928747 - MIR SINE MIR -82 180 117 331 308 21 56 chr18 4749588 4749731 -81927817 - L2 LINE L2 -3 3269 3132 202 331 130 43 chr18 4749774 4750028 -81927520 + L2 LINE L2 2866 3141 -131 309 290 21 11 chr18 4751380 4751473 -81926075 - MIR SINE MIR -57 151 58 6235 242 45 40 chr18 4751533 4751632 -81925916 - L1MCa LINE L1 -1979 4665 4568 2143 97 28 7 chr18 4751632 4751921 -81925627 - AluSg1 SINE Alu -10 299 5 6235 242 45 40 chr18 4751921 4752325 -81925223 - L1MCa LINE L1 -2076 4568 4168 2101 116 0 3 chr18 4752325 4752631 -81924917 - AluSg SINE Alu 0 305 1 6235 242 45 40 chr18 4752631 4753410 -81924138 - L1MCa LINE L1 -2476 4168 3394 1754 149 3 10 chr18 4753410 4753705 -81923843 + AluY SINE Alu 1 293 -18 6235 242 45 40 chr18 4753705 4754688 -81922860 - L1MCa LINE L1 -3250 3394 2396 2126 151 7 76 chr18 4754691 4754858 -81922690 - Tigger2 DNA MER2_type -2316 402 225 1822 108 10 61 chr18 4754858 4755153 -81922395 - AluSx SINE Alu -22 290 11 2126 151 7 76 chr18 4755153 4755417 -81922131 - Tigger2 DNA MER2_type -2493 225 1 1033 154 6 34 chr18 4755417 4755459 -81922089 - MER2 DNA MER2_type -177 168 126 1781 185 3 10 chr18 4755459 4755761 -81921787 + AluJb SINE Alu 1 300 -12 1033 154 6 34 chr18 4755761 4755889 -81921659 - MER2 DNA MER2_type -219 126 3 1515 250 170 39 chr18 4755934 4756651 -81920897 - L1MCa LINE L1 -5667 875 65 844 207 32 65 chr18 4756702 4756948 -81920600 + L1MD1 LINE L1 5636 5873 -369 * 1239 133 19 14 chr18 4756750 4756951 -81920597 + L1MB8 LINE L1 5675 5879 -299 868 175 13 32 chr18 4756951 4757105 -81920443 + FRAM SINE Alu 1 151 -15 1440 150 16 20 chr18 4757229 4757482 -81920066 - Tigger2 DNA MER2_type -2466 252 1 268 116 0 0 chr18 4757482 4757521 -81920027 - MER2 DNA MER2_type -177 168 130 2243 134 0 6 chr18 4757524 4757838 -81919710 + AluSx SINE Alu 1 312 0 1241 163 0 30 chr18 4757847 4758049 -81919499 + AluSg SINE Alu 3 198 -112 1595 104 36 0 chr18 4758152 4758374 -81919174 - AluSq SINE Alu -83 230 1 1892 86 12 4 chr18 4758510 4758755 -81918793 + AluSq SINE Alu 1 247 -66 406 256 54 18 chr18 4758757 4758925 -81918623 - MER104 DNA MER2_type -4 176 3 243 286 18 62 chr18 4759087 4759199 -81918349 - MIR SINE MIR -76 186 80 205 375 39 10 chr18 4760218 4760322 -81917226 - MIR SINE MIR -48 214 108 336 282 67 67 chr18 4760381 4760491 -81917057 - MIR SINE MIR -48 214 102 1921 129 16 30 chr18 4760491 4760794 -81916754 + AluJo SINE Alu 9 307 -5 336 282 67 67 chr18 4760794 4760832 -81916716 - MIR SINE MIR -159 103 66 776 159 0 0 chr18 4762345 4762452 -81915096 + FLAM_A SINE Alu 1 107 -35 255 342 107 37 chr18 4762558 4762856 -81914692 + MLT1K LTR MaLR 34 352 -236 2170 99 0 0 chr18 4763177 4763459 -81914089 + AluSx SINE Alu 30 311 -1 31 26 0 0 chr18 4764009 4764047 -81913501 + AT_rich Low_complexity Low_complexity 1 38 0 1964 289 114 28 chr18 4764774 4764809 -81912739 - L2 LINE L2 0 3313 3282 1252 198 99 37 chr18 4764809 4765133 -81912415 + MER2 DNA MER2_type 1 344 0 1964 289 114 28 chr18 4765133 4765202 -81912346 - L2 LINE L2 -31 3282 3220 3495 156 25 3 chr18 4765202 4765767 -81911781 + L1PA16 LINE L1 5587 6163 -3 1964 289 114 28 chr18 4765767 4766905 -81910643 - L2 LINE L2 -93 3220 1974 759 227 65 32 chr18 4767093 4767340 -81910208 + MER112 DNA MER1_type 1 255 -1 1998 160 0 0 chr18 4767838 4768144 -81909404 + AluJo SINE Alu 1 306 -6 193 235 0 59 chr18 4768392 4768460 -81909088 + MIR SINE MIR 199 262 0 322 308 60 23 chr18 4768600 4768733 -81908815 + MIR SINE MIR 47 184 -78 1778 190 85 3 chr18 4769000 4769363 -81908185 - MLT2C1 LTR ERVL 0 397 5 2143 110 0 7 chr18 4769764 4770063 -81907485 + AluSg SINE Alu 1 297 -13 388 54 89 0 chr18 4770817 4770873 -81906675 - L1PA7 LINE L1 0 6154 6094 340 326 104 0 chr18 4771094 4771229 -81906319 - MIR3 SINE MIR -56 152 4 981 0 0 0 chr18 4772611 4772720 -81904828 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 2002 139 7 3 chr18 4772725 4773013 -81904535 - AluJb SINE Alu -21 291 3 2602 59 0 0 chr18 4773505 4773811 -81903737 + AluY SINE Alu 1 306 -5 372 330 28 0 chr18 4773941 4774050 -81903498 + L2 LINE L2 3201 3312 -1 302 241 58 86 chr18 4774122 4774296 -81903252 + HAL1 LINE L1 2338 2506 -1 2255 106 3 3 chr18 4774849 4775150 -81902398 + AluSc SINE Alu 1 301 -8 213 216 0 0 chr18 4775362 4775413 -81902135 - L2 LINE L2 -2 3311 3261 21 0 0 0 chr18 4775781 4775802 -81901746 + AT_rich Low_complexity Low_complexity 1 21 0 2247 121 0 9 chr18 4777047 4777362 -81900186 + AluSx SINE Alu 1 312 0 302 336 72 32 chr18 4778696 4778821 -81898727 - L2 LINE L2 0 3313 3184 1655 189 112 26 chr18 4779696 4780152 -81897396 - MLT1D LTR MaLR -9 496 2 501 259 19 9 chr18 4780168 4780330 -81897218 - MIR SINE MIR -7 255 47 200 268 0 0 chr18 4781104 4781145 -81896403 + MIR SINE MIR 114 154 -108 1080 294 34 98 chr18 4781290 4782281 -81895267 - L2 LINE L2 -18 3254 2334 347 0 23 0 chr18 4785519 4785562 -81891986 + (TG)n Simple_repeat Simple_repeat 2 45 0 2595 186 15 4 chr18 4785876 4786418 -81891130 + L1MB7 LINE L1 5591 6138 -46 673 263 78 0 chr18 4786433 4786665 -81890883 - L1M4 LINE L1 -2268 3878 3629 204 284 0 0 chr18 4786941 4787036 -81890512 + GA-rich Low_complexity Low_complexity 1 95 0 1545 198 83 0 chr18 4787350 4787638 -81889910 + AluJo SINE Alu 1 312 0 208 87 0 43 chr18 4787755 4787801 -81889747 + (GGA)n Simple_repeat Simple_repeat 2 45 0 569 329 176 30 chr18 4787914 4788677 -81888871 + L2 LINE L2 2209 3066 -206 401 279 57 29 chr18 4789185 4789325 -81888223 + L2 LINE L2 3129 3272 0 1979 110 0 79 chr18 4789565 4789882 -81887666 + AluSx SINE Alu 1 292 -20 218 385 39 0 chr18 4790164 4790242 -81887306 + L3 LINE CR1 227 307 -1270 22 0 0 0 chr18 4790283 4790305 -81887243 + AT_rich Low_complexity Low_complexity 1 22 0 385 105 40 0 chr18 4791085 4791161 -81886387 + L1PA15 LINE L1 6087 6165 0 400 293 92 29 chr18 4791486 4791865 -81885683 + HAL1b LINE L1 68 470 -878 272 232 39 78 chr18 4792126 4792459 -81885089 - L1M4 LINE L1 -2153 3993 3664 26 30 0 0 chr18 4792604 4792637 -81884911 + AT_rich Low_complexity Low_complexity 1 33 0 1417 136 17 13 chr18 4792740 4792817 -81884731 - MER46A DNA MER2_type -2495 236 161 1608 178 71 3 chr18 4792817 4793143 -81884405 + MER7A DNA MER2_type 1 346 0 1417 136 17 13 chr18 4793143 4793300 -81884248 - MER46A DNA MER2_type -2570 161 1 313 311 0 19 chr18 4793371 4793474 -81884074 - L1M4 LINE L1 -2842 3304 3204 297 330 113 43 chr18 4793610 4793892 -81883656 + L3 LINE CR1 452 753 -824 654 271 11 33 chr18 4793929 4794110 -81883438 - MER91B DNA MER1_type -12 178 2 408 325 136 47 chr18 4794137 4794483 -81883065 + L3 LINE CR1 798 1198 -379 3067 106 20 0 chr18 4794483 4794928 -81882620 + L1PA15 LINE L1 5707 6160 -5 408 325 136 47 chr18 4794928 4795052 -81882496 + L3 LINE CR1 1198 1310 -267 186 71 0 0 chr18 4795082 4795110 -81882438 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 2166 96 4 0 chr18 4795110 4795391 -81882157 - AluSg SINE Alu -28 282 1 21 0 0 0 chr18 4796029 4796050 -81881498 + AT_rich Low_complexity Low_complexity 1 21 0 2393 66 0 13 chr18 4796180 4796481 -81881067 + AluY SINE Alu 1 297 -14 21 0 0 0 chr18 4796560 4796581 -81880967 + AT_rich Low_complexity Low_complexity 1 21 0 30 27 0 0 chr18 4796747 4796784 -81880764 + AT_rich Low_complexity Low_complexity 1 37 0 392 325 136 18 chr18 4797073 4797464 -81880084 + L2 LINE L2 1860 2296 -1018 347 295 72 30 chr18 4797466 4797632 -81879916 + L2 LINE L2 2467 2639 -675 342 350 58 25 chr18 4797644 4797887 -81879661 + L2 LINE L2 2288 2538 -776 241 280 68 68 chr18 4797924 4798042 -81879506 + L2 LINE L2 3141 3258 -14 372 210 0 0 chr18 4798078 4798159 -81879389 + (TA)n Simple_repeat Simple_repeat 1 81 0 2276 188 47 26 chr18 4798990 4799419 -81878129 + MLT1D LTR MaLR 1 444 -61 2418 53 3 0 chr18 4799419 4799722 -81877826 + AluY SINE Alu 1 304 0 2276 188 47 26 chr18 4799722 4799786 -81877762 + MLT1D LTR MaLR 444 505 0 619 281 46 40 chr18 4799919 4800170 -81877378 - MIR SINE MIR 0 262 13 354 231 39 0 chr18 4800257 4800361 -81877187 + MLT1D LTR MaLR 1 108 -397 184 306 0 0 chr18 4800638 4800674 -81876874 + L2 LINE L2 3147 3182 -90 241 361 120 0 chr18 4802336 4802469 -81875079 - MIR SINE MIR -62 200 52 696 222 57 0 chr18 4802635 4802829 -81874719 + MER3 DNA MER1_type 1 205 -4 263 397 33 0 chr18 4802846 4802967 -81874581 - L3 LINE CR1 -20 1557 1433 198 337 76 11 chr18 4803752 4803844 -81873704 + L3 LINE CR1 444 541 -1036 341 289 0 33 chr18 4805246 4805336 -81872212 + MIR SINE MIR 15 101 -161 2106 129 0 10 chr18 4806440 4806751 -81870797 - AluSg SINE Alu -2 308 1 266 252 136 4 chr18 4806828 4806956 -81870592 + MIR3 SINE MIR 29 180 -28 1699 171 20 7 chr18 4808884 4809176 -81868372 + AluJo SINE Alu 6 301 -11 269 269 179 37 chr18 4809527 4809661 -81867887 - MIR SINE MIR -108 154 2 319 283 30 10 chr18 4809755 4809854 -81867694 + MER5B DNA MER1_type 72 172 -6 423 0 0 0 chr18 4810205 4810252 -81867296 + (TCTA)n Simple_repeat Simple_repeat 3 49 0 189 0 0 0 chr18 4811825 4811846 -81865702 + (A)n Simple_repeat Simple_repeat 1 21 0 1882 151 0 4 chr18 4862604 4862882 -81814666 - AluJb SINE Alu -35 277 1 409 305 70 38 chr18 4863370 4863757 -81813791 - MLT1L LTR MaLR -167 421 5 432 158 26 0 chr18 4864489 4864565 -81812983 + MER45B DNA AcHobo 503 580 -460 336 300 30 0 chr18 4864709 4864809 -81812739 + MER45 DNA AcHobo 1 103 -1478 * 986 100 0 0 chr18 4864800 4864930 -81812618 - Tigger1 DNA MER2_type -337 2081 1952 262 86 0 0 chr18 4864930 4864965 -81812583 + THE1A LTR MaLR 1 35 -320 2457 70 3 0 chr18 4864965 4865263 -81812285 - AluSc SINE Alu -10 299 1 237 183 139 35 chr18 4865318 4865433 -81812115 + Charlie7 DNA MER1_type 2473 2599 -13 * 296 100 0 0 chr18 4865428 4865468 -81812080 - Alu SINE Alu -262 40 1 * 1720 88 74 57 chr18 4865468 4865744 -81811804 + THE1B LTR MaLR 28 308 -56 2085 110 3 3 chr18 4865744 4866046 -81811502 + AluSq SINE Alu 1 302 0 2337 98 3 0 chr18 4866050 4866357 -81811191 + AluSx SINE Alu 1 308 -4 244 273 64 36 chr18 4867089 4867199 -81810349 - MIR SINE MIR -54 208 96 1825 162 7 20 chr18 4867243 4867540 -81810008 - AluSx SINE Alu -19 293 1 1571 133 58 55 chr18 4867713 4867837 -81809711 + AluJo SINE Alu 1 123 -189 2290 93 7 0 chr18 4867837 4868128 -81809420 - AluSp SINE Alu -20 293 1 1571 133 58 55 chr18 4868128 4868296 -81809252 + AluJo SINE Alu 123 294 -18 237 277 152 0 chr18 4869861 4869973 -81807575 + MIR SINE MIR 74 202 -60 26 30 0 0 chr18 4869988 4870021 -81807527 + AT_rich Low_complexity Low_complexity 1 33 0 2096 128 7 0 chr18 4870142 4870431 -81807117 - AluSx SINE Alu -21 291 1 513 95 74 32 chr18 4870464 4870559 -81806989 - L1MA8 LINE L1 -3 6288 6190 2500 36 0 0 chr18 4870626 4870947 -81806601 - AluY SINE Alu 0 321 1 1502 134 0 0 chr18 4870957 4871166 -81806382 - AluJo SINE Alu -20 292 84 1788 171 18 0 chr18 4871265 4871546 -81806002 + AluJo SINE Alu 1 286 -26 2185 118 0 13 chr18 4871932 4872238 -81805310 + AluSx SINE Alu 1 302 -10 315 296 123 25 chr18 4873177 4873339 -81804209 + MER5B DNA MER1_type 1 178 0 1720 280 99 39 chr18 4873374 4875217 -81802331 + L1ME LINE L1 10 1984 -4277 2023 140 0 13 chr18 4875269 4875577 -81801971 + AluSx SINE Alu 1 304 -8 26 50 0 0 chr18 4875658 4875698 -81801850 + AT_rich Low_complexity Low_complexity 1 40 0 499 205 173 8 chr18 4875704 4875963 -81801585 + L1ME LINE L1 1956 2255 -3825 22 0 0 0 chr18 4877854 4877876 -81799672 + AT_rich Low_complexity Low_complexity 1 22 0 2202 96 7 7 chr18 4880744 4881046 -81796502 + AluSx SINE Alu 1 302 -10 264 167 0 0 chr18 4881046 4881094 -81796454 + GA-rich Low_complexity Low_complexity 1 48 0 823 186 0 0 chr18 4881120 4881249 -81796299 + FRAM SINE Alu 24 152 -24 906 124 0 16 chr18 4881682 4881811 -81795737 + FLAM_C SINE Alu 1 127 -6 586 205 0 26 chr18 4881873 4881990 -81795558 - L1MB8 LINE L1 -1 6177 6064 2107 122 27 3 chr18 4882003 4882298 -81795250 - AluSx SINE Alu -10 302 1 2322 99 6 6 chr18 4882582 4882895 -81794653 - AluSq SINE Alu 0 313 1 1627 151 10 30 chr18 4883005 4883310 -81794238 - AluSx SINE Alu -13 299 1 996 235 5 59 chr18 4883311 4883557 -81793991 + L1 LINE L1 4845 5170 -976 2296 98 3 19 chr18 4883557 4883873 -81793675 + AluSx SINE Alu 1 311 -1 996 235 5 59 chr18 4883873 4884031 -81793517 + L1 LINE L1 5170 5335 -811 2487 58 0 3 chr18 4884031 4884326 -81793222 + AluY SINE Alu 1 294 -17 214 208 19 0 chr18 4884359 4884412 -81793136 + A-rich Low_complexity Low_complexity 1 54 0 757 117 155 82 chr18 4884556 4884762 -81792786 + AluJo SINE Alu 80 300 -12 381 281 58 0 chr18 4884765 4884886 -81792662 - MER39 LTR ERV1 -320 387 260 243 164 68 82 chr18 4884869 4884942 -81792606 - LTR48B LTR ERV1 -552 92 21 * 1787 190 7 0 chr18 4885286 4885586 -81791962 + AluJo SINE Alu 1 302 -10 207 69 0 0 chr18 4885887 4885916 -81791632 + (A)n Simple_repeat Simple_repeat 1 29 0 255 103 0 0 chr18 4887731 4887770 -81789778 + (CA)n Simple_repeat Simple_repeat 2 40 0 419 215 140 79 chr18 4888038 4888266 -81789282 - MER112 DNA MER1_type -10 250 9 205 217 98 98 chr18 4888957 4889049 -81788499 + MIR3 SINE MIR 103 194 -14 260 180 0 0 chr18 4889062 4889112 -81788436 - MIR SINE MIR -91 117 68 301 212 50 10 chr18 4889971 4890070 -81787478 + L1ME4a LINE L1 6017 6119 -2 2077 93 35 14 chr18 4890131 4890421 -81787127 - AluSq SINE Alu -17 296 1 1405 154 157 11 chr18 4890479 4890746 -81786802 - AluJo SINE Alu -6 306 1 405 263 97 51 chr18 4891000 4891338 -81786210 + MLT1L LTR MaLR 2 434 -181 1994 119 35 0 chr18 4891338 4891623 -81785925 + AluSp SINE Alu 1 295 -18 405 263 97 51 chr18 4891623 4891740 -81785808 + MLT1L LTR MaLR 434 544 -71 289 205 51 51 chr18 4891847 4891925 -81785623 + LTR48B LTR ERV1 1 78 -566 621 168 199 37 chr18 4891927 4892088 -81785460 + MER39 LTR ERV1 284 470 -237 2120 91 33 0 chr18 4892131 4892406 -81785142 - AluSx SINE Alu -17 295 12 351 0 0 0 chr18 4892500 4892539 -81785009 + (TG)n Simple_repeat Simple_repeat 2 40 0 2440 87 0 3 chr18 4892850 4893160 -81784388 + AluY SINE Alu 1 309 -2 2227 89 36 17 chr18 4893174 4893476 -81784072 + AluSp SINE Alu 1 308 -5 326 78 0 20 chr18 4893590 4893641 -81783907 + (TTTC)n Simple_repeat Simple_repeat 3 52 0 2299 101 7 0 chr18 4893643 4893950 -81783598 - AluSp SINE Alu -4 309 1 1715 74 283 179 chr18 4894240 4894714 -81782834 - LTR12 LTR ERV1 -133 581 59 277 211 0 0 chr18 4894716 4894768 -81782780 - LTR30 LTR ERV1 -670 52 1 2146 107 21 0 chr18 4894774 4895065 -81782483 + AluSq SINE Alu 2 298 -15 560 221 8 30 chr18 4895504 4895635 -81781913 + FLAM_A SINE Alu 1 128 -14 744 178 0 30 chr18 4896322 4896457 -81781091 - FLAM_C SINE Alu -11 132 2 1834 149 7 24 chr18 4897062 4897358 -81780190 + AluJo SINE Alu 1 291 -21 2167 118 0 0 chr18 4898165 4898454 -81779094 - AluSx SINE Alu -23 289 1 2095 131 3 3 chr18 4900764 4901061 -81776487 + AluSx SINE Alu 3 299 -13 1825 154 3 7 chr18 4901332 4901630 -81775918 - AluSg SINE Alu -13 297 1 371 251 74 0 chr18 4902158 4902284 -81775264 + MIR SINE MIR 13 143 -65 2251 102 0 7 chr18 4902304 4902608 -81774940 + AluSg SINE Alu 1 302 -8 246 62 0 0 chr18 4902608 4902640 -81774908 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 394 86 0 0 chr18 4903464 4903522 -81774026 + L1MA2 LINE L1 6243 6300 -4 1014 160 0 0 chr18 4903556 4903712 -81773836 + FRAM SINE Alu 1 156 -10 364 171 86 0 chr18 4904024 4904094 -81773454 - AluJ/FRAM SINE Alu -2 300 225 1266 153 5 0 chr18 4904095 4904285 -81773263 - AluSx SINE Alu -121 191 1 235 278 51 51 chr18 4904397 4904573 -81772975 + MER104 DNA Tc2 5 180 0 1434 110 5 5 chr18 4904688 4904897 -81772651 - AluSq SINE Alu -2 311 103 817 88 0 0 chr18 4904974 4905076 -81772472 - AluSq SINE Alu -210 102 1 12395 121 15 21 chr18 4905077 4905701 -81771847 - Tigger1 DNA MER2_type -525 1893 1267 2220 89 7 0 chr18 4905701 4905982 -81771566 + AluY SINE Alu 15 297 -14 12395 121 15 21 chr18 4905982 4906668 -81770880 - Tigger1 DNA MER2_type -1151 1267 578 2233 106 0 10 chr18 4906668 4906980 -81770568 + AluSx SINE Alu 1 309 -3 12395 121 15 21 chr18 4906980 4907348 -81770200 - Tigger1 DNA MER2_type -1840 578 225 2121 120 7 3 chr18 4907348 4907656 -81769892 + AluSg SINE Alu 1 309 -1 12395 121 15 21 chr18 4907656 4907867 -81769681 - Tigger1 DNA MER2_type -2193 225 14 486 167 31 0 chr18 4907884 4907980 -81769568 + MER45B DNA AcHobo 487 585 -455 805 151 14 142 chr18 4908086 4908298 -81769250 - AluJo SINE Alu -126 186 2 1212 262 40 51 chr18 4908397 4908950 -81768598 - HAL1 LINE L1 -1556 951 405 1041 280 21 15 chr18 4908966 4909298 -81768250 - HAL1 LINE L1 -2173 334 1 2338 108 3 0 chr18 4909717 4910024 -81767524 - AluSx SINE Alu -4 308 1 2342 78 3 0 chr18 4911720 4912031 -81765517 + AluSq SINE Alu 1 312 0 216 291 38 13 chr18 4912211 4912290 -81765258 - MIR SINE MIR -30 232 152 3607 170 67 6 chr18 4912322 4913023 -81764525 - L1MC1 LINE L1 -6 6327 5584 322 233 0 0 chr18 4913030 4913090 -81764458 + AluJ/FLAM SINE Alu 6 65 -237 3618 217 35 45 chr18 4913090 4913432 -81764116 - L1MCa LINE L1 -2851 3575 3231 2284 102 0 7 chr18 4913432 4913726 -81763822 + AluSg SINE Alu 2 293 -17 3618 217 35 45 chr18 4913726 4913914 -81763634 - L1MCa LINE L1 -3195 3231 3043 1543 122 9 5 chr18 4913914 4914135 -81763413 + AluSq SINE Alu 77 298 -15 3618 217 35 45 chr18 4914135 4914430 -81763118 - L1MCa LINE L1 -3383 3043 2746 1958 124 37 0 chr18 4914430 4914726 -81762822 - AluSx SINE Alu 0 306 1 3618 217 35 45 chr18 4914726 4915059 -81762489 - L1MCa LINE L1 -3680 2746 2426 3689 93 14 0 chr18 4915059 4915566 -81761982 + MER75 DNA T2_type 1 514 0 3618 217 35 45 chr18 4915566 4915647 -81761901 - L1MCa LINE L1 -4000 2426 2346 1864 149 10 3 chr18 4915833 4916128 -81761420 - AluSg SINE Alu -13 297 1 1889 132 10 20 chr18 4916128 4916430 -81761118 - AluSg SINE Alu -10 300 1 800 163 18 72 chr18 4917000 4917025 -81760523 + Tigger1 DNA MER2_type 1 26 -2392 2192 98 0 7 chr18 4917025 4917333 -81760215 - AluSq SINE Alu 0 307 2 800 163 18 72 chr18 4917333 4917472 -81760076 + Tigger1 DNA MER2_type 26 157 -2261 2133 103 38 3 chr18 4917480 4917770 -81759778 - AluSq SINE Alu -13 300 1 202 232 29 43 chr18 4917793 4917862 -81759686 + MIR SINE MIR 16 83 -125 628 235 48 88 chr18 4917882 4918297 -81759251 - MLT1F LTR MaLR -15 527 105 2037 118 3 34 chr18 4918297 4918619 -81758929 - AluJb SINE Alu 0 312 1 628 235 48 88 chr18 4918619 4918652 -81758896 - MLT1F LTR MaLR -437 105 72 320 329 79 0 chr18 4918710 4918850 -81758698 + MER58B DNA MER1_type 191 341 0 367 186 0 0 chr18 4918854 4918913 -81758635 - MLT1F LTR MaLR -533 62 4 2298 110 0 3 chr18 4919866 4920175 -81757373 + AluSx SINE Alu 2 309 -3 1797 143 26 4 chr18 4920294 4920566 -81756982 + AluJo SINE Alu 17 294 -18 1910 147 7 0 chr18 4920573 4920865 -81756683 + AluSx SINE Alu 1 294 -18 1232 241 78 8 chr18 4920881 4921242 -81756306 + MER45B DNA AcHobo 653 1038 -2 2339 117 0 0 chr18 4921477 4921785 -81755763 - AluSx SINE Alu -4 308 1 1954 125 0 60 chr18 4922284 4922603 -81754945 - AluSx SINE Alu -12 300 1 258 333 63 0 chr18 4922844 4922955 -81754593 - MIR3 SINE MIR -14 194 77 2252 64 0 4 chr18 4923173 4923437 -81754111 + AluSg SINE Alu 1 263 -47 2296 97 0 13 chr18 4923551 4923850 -81753698 - AluSq SINE Alu -18 295 1 1665 192 10 3 chr18 4924573 4924880 -81752668 - AluJo SINE Alu -3 309 1 295 351 88 0 chr18 4925336 4925450 -81752098 + L2 LINE L2 3137 3260 -12 1860 221 11 0 chr18 4925551 4925909 -81751639 - MLT1A1 LTR MaLR -3 362 1 194 343 34 45 chr18 4925914 4926092 -81751456 + L3 LINE CR1 1383 1558 -19 21 0 0 0 chr18 4926994 4927015 -81750533 + AT_rich Low_complexity Low_complexity 1 21 0 410 154 64 0 chr18 4927020 4927098 -81750450 + L1MB4 LINE L1 6092 6174 -6 1738 144 18 25 chr18 4927113 4927452 -81750096 + AluJb SINE Alu 3 339 0 189 0 0 0 chr18 4927570 4927591 -81749957 + (A)n Simple_repeat Simple_repeat 1 21 0 1731 80 13 0 chr18 4927753 4927979 -81749569 - AluSc SINE Alu -80 229 1 21 0 0 0 chr18 4927979 4928000 -81749548 + AT_rich Low_complexity Low_complexity 1 21 0 1210 168 0 15 chr18 4928000 4928197 -81749351 - AluJo SINE Alu -30 282 89 2096 81 68 14 chr18 4928303 4928598 -81748950 - AluSq SINE Alu -2 311 1 3136 236 64 15 chr18 4928602 4929187 -81748361 - L1MEc LINE L1 -2851 3364 2708 1653 166 35 3 chr18 4929187 4929476 -81748072 - AluJb SINE Alu -14 298 1 3136 236 64 15 chr18 4929476 4929890 -81747658 - L1MEc LINE L1 -3507 2708 2316 1025 125 0 0 chr18 4929907 4930043 -81747505 - AluSq/x SINE Alu -177 136 1 614 213 45 25 chr18 4930043 4930245 -81747303 - L1MEc LINE L1 -4021 2375 2170 2138 131 0 16 chr18 4930318 4930631 -81746917 - AluSx SINE Alu -4 308 1 694 179 0 15 chr18 4930731 4930865 -81746683 + AluSg/x SINE Alu 154 285 -27 225 94 0 0 chr18 4930865 4930897 -81746651 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 1230 176 27 23 chr18 4930899 4931160 -81746388 + L1M4 LINE L1 2673 2934 -3212 394 262 7 65 chr18 4931155 4931203 -81746345 - L1PBa LINE L1 -4265 1951 1902 * 2025 146 7 0 chr18 4931203 4931511 -81746037 - AluSx SINE Alu -2 310 1 394 262 7 65 chr18 4931511 4931609 -81745939 - L1PBa LINE L1 -4314 1902 1800 207 0 0 0 chr18 4931609 4931632 -81745916 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 394 262 7 65 chr18 4931632 4931660 -81745888 - L1PBa LINE L1 -4416 1800 1590 * 1306 243 114 2 chr18 4931653 4932057 -81745491 - L1MEc LINE L1 -5926 470 22 2131 72 25 0 chr18 4932154 4932431 -81745117 + AluY SINE Alu 1 284 -27 1640 137 33 68 chr18 4932559 4932761 -81744787 - MLT1B LTR MaLR -94 296 88 1877 152 3 13 chr18 4932761 4933070 -81744478 + AluJo SINE Alu 1 306 -6 2332 89 0 0 chr18 4933076 4933401 -81744147 + AluSg SINE Alu 1 325 0 1640 137 33 68 chr18 4933401 4933497 -81744051 - MLT1B LTR MaLR -307 83 1 284 151 86 178 chr18 4933502 4933654 -81743894 + HAL1 LINE L1 2109 2246 -261 1962 96 0 0 chr18 4933657 4933906 -81743642 + AluSg SINE Alu 1 249 -61 653 219 126 0 chr18 4934687 4934838 -81742710 + FAM SINE Alu 1 170 -5 2385 136 20 17 chr18 4934864 4935270 -81742278 + L1MB1 LINE L1 5762 6168 0 810 127 0 0 chr18 4936401 4936511 -81741037 + FLAM_C SINE Alu 1 110 -33 248 53 26 0 chr18 4936815 4936853 -81740695 + (CAAAA)n Simple_repeat Simple_repeat 3 41 0 498 276 126 0 chr18 4937770 4937984 -81739564 - MIR SINE MIR -1 261 21 23 0 0 0 chr18 4939728 4939751 -81737797 + AT_rich Low_complexity Low_complexity 1 23 0 2266 110 13 0 chr18 4940095 4940394 -81737154 + AluSx SINE Alu 1 303 -9 1886 128 44 17 chr18 4940584 4940764 -81736784 - AluSg SINE Alu -5 305 112 396 0 0 0 chr18 4940764 4940808 -81736740 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 1886 128 44 17 chr18 4940808 4940924 -81736624 - AluSg SINE Alu -198 112 1 300 276 26 26 chr18 4944908 4945024 -81732524 - MIR SINE MIR -75 133 18 2258 104 0 13 chr18 4945133 4945431 -81732117 + AluSx SINE Alu 1 294 -18 351 0 0 0 chr18 4947155 4947194 -81730354 + (TG)n Simple_repeat Simple_repeat 2 40 0 185 258 86 32 chr18 4948090 4948183 -81729365 + L3b LINE CR1 1278 1375 -208 1070 217 21 0 chr18 4948631 4948866 -81728682 + MIR SINE MIR 13 252 -10 240 35 0 0 chr18 4948873 4948902 -81728646 + (TTA)n Simple_repeat Simple_repeat 3 31 0 196 298 119 0 chr18 4948986 4949070 -81728478 - MIR SINE MIR -137 125 32 579 255 117 27 chr18 4949280 4949690 -81727858 - L1MC4a LINE L1 -302 5819 5536 297 128 0 0 chr18 4949763 4949810 -81727738 + (A)n Simple_repeat Simple_repeat 1 47 0 2143 118 3 3 chr18 4951629 4951933 -81725615 - AluSx SINE Alu -8 304 1 2069 105 7 24 chr18 4953541 4953836 -81723712 + AluSc SINE Alu 1 290 -19 180 0 0 0 chr18 4953939 4953959 -81723589 + (T)n Simple_repeat Simple_repeat 1 20 0 4206 172 42 49 chr18 4954112 4955063 -81722485 + L1MB5 LINE L1 5211 6168 -6 756 198 11 6 chr18 4955071 4955248 -81722300 + L1M4 LINE L1 3839 4016 -2130 948 147 6 19 chr18 4955273 4955430 -81722118 + AluJb SINE Alu 1 155 -157 462 208 10 0 chr18 4955448 4955544 -81722004 + L1M4 LINE L1 4028 4124 -2022 1927 153 0 7 chr18 4955545 4955839 -81721709 + AluSx SINE Alu 1 292 -20 269 298 40 16 chr18 4955878 4956002 -81721546 - HAL1 LINE L1 -6 2501 2375 2483 87 0 3 chr18 4956112 4956422 -81721126 - AluSp SINE Alu -4 309 1 2217 112 7 0 chr18 4956422 4956717 -81720831 - AluSq SINE Alu -16 297 1 298 263 15 60 chr18 4956839 4956972 -81720576 + LTR33A LTR ERVL 377 503 -20 553 236 26 77 chr18 4957541 4957736 -81719812 - MIR SINE MIR -8 254 70 2438 85 0 0 chr18 4957916 4958210 -81719338 - AluSc SINE Alu -15 294 1 462 280 83 0 chr18 4958271 4958428 -81719120 + MIR SINE MIR 48 217 -45 24 0 0 0 chr18 4958595 4958619 -81718929 + AT_rich Low_complexity Low_complexity 1 24 0 476 151 0 0 chr18 4958700 4958773 -81718775 + L1MB3 LINE L1 6072 6144 -39 2194 113 3 0 chr18 4958774 4959065 -81718483 - AluSp SINE Alu -21 292 1 195 42 0 0 chr18 4960052 4960076 -81717472 + (GGA)n Simple_repeat Simple_repeat 3 26 0 12032 116 30 41 chr18 4961433 4961888 -81715660 - Tigger1 DNA MER2_type -455 1963 1505 958 65 26 85 chr18 4961888 4962041 -81715507 - L1MA1 LINE L1 -4 6298 6155 12032 116 30 41 chr18 4962041 4962186 -81715362 - Tigger1 DNA MER2_type -913 1505 1360 2052 142 47 39 chr18 4962186 4962546 -81715002 - THE1B LTR MaLR -1 363 1 12032 116 30 41 chr18 4962546 4963174 -81714374 - Tigger1 DNA MER2_type -1058 1360 727 1415 118 6 68 chr18 4963174 4963495 -81714053 + AluSq SINE Alu 1 301 -12 12032 116 30 41 chr18 4963495 4964248 -81713300 - Tigger1 DNA MER2_type -1691 727 1 1195 198 12 130 chr18 4965194 4965558 -81711990 + MLT1A1 LTR MaLR 1 312 -53 1185 58 0 13 chr18 4965558 4965713 -81711835 + L1PA8 LINE L1 6016 6168 -4 1195 198 12 130 chr18 4965713 4965762 -81711786 + MLT1A1 LTR MaLR 312 365 0 1935 173 65 8 chr18 4966063 4966432 -81711116 + MLT1B LTR MaLR 1 390 0 223 279 0 0 chr18 4967748 4967809 -81709739 + T-rich Low_complexity Low_complexity 1 61 0 271 280 65 9 chr18 4969124 4969231 -81708317 + MIR SINE MIR 34 146 -62 423 160 0 0 chr18 4969267 4969342 -81708206 + T-rich Low_complexity Low_complexity 1 75 0 207 69 0 0 chr18 4969481 4969510 -81708038 + (A)n Simple_repeat Simple_repeat 1 29 0 1032 101 78 33 chr18 4969521 4969770 -81707778 - L1MCa LINE L1 -4553 1873 1525 936 152 63 0 chr18 4969824 4969982 -81707566 - THE1B LTR MaLR -2 362 195 2318 80 7 3 chr18 4969991 4970277 -81707271 + AluSq SINE Alu 3 289 -24 21 0 0 0 chr18 4970277 4970298 -81707250 + AT_rich Low_complexity Low_complexity 1 21 0 363 240 0 0 chr18 4970301 4970376 -81707172 + FLAM_A SINE Alu 23 97 -36 1284 152 15 0 chr18 4970376 4970580 -81706968 + THE1B LTR MaLR 1 207 -157 207 0 0 0 chr18 4970580 4970603 -81706945 + (T)n Simple_repeat Simple_repeat 1 23 0 1819 118 0 8 chr18 4970735 4970990 -81706558 - AluSx SINE Alu -59 253 1 4183 149 4 20 chr18 4971540 4972256 -81705292 - L1MB3 LINE L1 -2 6181 5477 234 91 0 0 chr18 4972841 4972874 -81704674 + (A)n Simple_repeat Simple_repeat 1 33 0 2171 131 0 10 chr18 4974650 4974962 -81702586 + AluSx SINE Alu 1 309 -3 1095 100 0 0 chr18 4975068 4975208 -81702340 - AluSg/x SINE Alu -36 276 137 2106 108 63 18 chr18 4975503 4975836 -81701712 - Tigger1 DNA MER2_type 0 2418 2071 825 138 8 0 chr18 4975849 4975979 -81701569 - FLAM_C SINE Alu -12 131 1 1040 90 7 7 chr18 4975979 4976124 -81701424 - Tigger1 DNA MER2_type -324 2094 1950 2283 61 7 3 chr18 4976126 4976423 -81701125 + AluY SINE Alu 1 298 -13 1496 187 3 7 chr18 4976434 4976723 -81700825 + AluJo SINE Alu 1 288 -24 911 124 0 16 chr18 4977156 4977285 -81700263 + FLAM_C SINE Alu 1 127 -6 581 205 0 26 chr18 4977347 4977464 -81700084 - L1MB8 LINE L1 -1 6177 6064 1968 119 31 3 chr18 4977477 4977771 -81699777 - AluSx SINE Alu -10 302 1 1688 152 7 20 chr18 4977770 4978073 -81699475 - AluJb SINE Alu 0 312 14 * 1839 140 17 0 chr18 4978085 4978385 -81699163 - AluJb SINE Alu -7 305 1 2184 81 37 0 chr18 4980595 4980892 -81696656 - AluSx SINE Alu -4 308 1 526 294 47 6 chr18 4981105 4981275 -81696273 - MIR SINE MIR -17 245 69 2220 103 3 0 chr18 4981294 4981604 -81695944 + AluSx SINE Alu 1 311 -1 2222 88 0 3 chr18 4981993 4982290 -81695258 + AluY SINE Alu 1 296 -15 1290 161 8 46 chr18 4982421 4982609 -81694939 - AluJb SINE Alu -19 293 116 2611 130 20 10 chr18 4982609 4983008 -81694540 - MER57A LTR ERV1 0 403 1 1290 161 8 46 chr18 4983008 4983079 -81694469 - AluJb SINE Alu -196 116 44 330 163 0 0 chr18 4983230 4983279 -81694269 - AluJb SINE Alu -253 49 1 757 204 60 0 chr18 4983302 4983469 -81694079 - MER5A DNA MER1_type -12 177 1 2140 98 0 0 chr18 4983542 4983854 -81693694 + AluSq SINE Alu 1 312 0 1850 188 81 77 chr18 4983904 4984398 -81693150 - MLT1D LTR MaLR -8 497 2 981 184 11 6 chr18 4984419 4984593 -81692955 + FAM SINE Alu 1 175 0 1428 157 73 7 chr18 4985172 4985446 -81692102 - MLT1B LTR MaLR 0 390 99 2356 58 0 3 chr18 4985446 4985741 -81691807 - AluY SINE Alu -17 294 1 1883 176 17 6 chr18 4985751 4986110 -81691438 - L1PA16 LINE L1 0 6166 5804 2143 113 0 7 chr18 4986283 4986592 -81690956 - AluSx SINE Alu -5 307 1 216 0 0 0 chr18 4986689 4986713 -81690835 + (CA)n Simple_repeat Simple_repeat 2 25 0 1951 132 3 0 chr18 4986767 4987054 -81690494 + AluSx SINE Alu 1 288 -24 394 292 28 16 chr18 4987054 4987203 -81690345 - L1MC4 LINE L1 -1139 6646 6513 331 252 107 10 chr18 4987204 4987307 -81690241 - L1MC4 LINE L1 -1339 6703 6591 494 92 0 0 chr18 4987383 4987448 -81690100 + AluS SINE Alu 2 66 -247 28 0 0 0 chr18 4988304 4988332 -81689216 + AT_rich Low_complexity Low_complexity 1 28 0 1948 115 0 14 chr18 4988339 4988627 -81688921 + AluJb SINE Alu 1 284 -28 263 253 0 11 chr18 4990414 4990505 -81687043 + GA-rich Low_complexity Low_complexity 2 91 0 2554 23 3 0 chr18 4992358 4992660 -81684888 - AluY SINE Alu -8 303 1 558 134 0 0 chr18 4993014 4993096 -81684452 - AluJ/FLAM SINE Alu -229 83 2 2120 112 0 0 chr18 4993526 4993821 -81683727 + AluSc SINE Alu 1 295 -14 1941 132 7 13 chr18 4993832 4994136 -81683412 + AluSx SINE Alu 1 302 -10 270 291 143 11 chr18 4994323 4994512 -81683036 - L2 LINE L2 -223 3049 2836 2359 39 0 29 chr18 4995109 4995415 -81682133 + AluY SINE Alu 1 297 -14 269 271 77 44 chr18 4996436 4996709 -81680839 - L1ME4a LINE L1 -116 6005 5724 2107 102 0 23 chr18 4997127 4997431 -81680117 - AluSc SINE Alu -12 297 1 317 331 85 99 chr18 4997466 4997759 -81679789 + L1ME3A LINE L1 360 648 -5557 2159 95 0 7 chr18 4997948 4998253 -81679295 + AluSq SINE Alu 5 307 -6 301 303 53 90 chr18 4998434 4998473 -81679075 + L1ME3A LINE L1 1858 1897 -4499 1441 168 66 3 chr18 4998473 4998759 -81678789 + AluJb SINE Alu 4 307 -5 301 303 53 90 chr18 4998759 4998773 -81678775 + L1ME3A LINE L1 1897 1910 -4486 1792 168 3 0 chr18 4998773 4999071 -81678477 - AluJb SINE Alu -5 307 9 301 303 53 90 chr18 4999071 4999260 -81678288 + L1ME3A LINE L1 1910 2092 -4304 1987 131 0 10 chr18 4999261 4999573 -81677975 + AluSx SINE Alu 1 309 -3 540 293 105 27 chr18 4999584 4999987 -81677561 + L1ME3A LINE L1 4602 5037 -1173 1458 216 50 65 chr18 4999987 5000511 -81677037 - MLT2B1 LTR ERVL 0 520 5 280 257 22 5 chr18 5000680 5000803 -81676745 + L1ME3A LINE L1 5416 5542 -697 2336 42 0 3 chr18 5000804 5001136 -81676412 - AluY SINE Alu 0 331 1 758 173 0 8 chr18 5001138 5001265 -81676283 - AluJ SINE Alu -6 306 181 623 147 174 0 chr18 5001267 5001376 -81676172 - AluJ SINE Alu -174 128 1 679 259 112 48 chr18 5001380 5001843 -81675705 + L1ME3A LINE L1 5539 6031 -208 1977 142 7 0 chr18 5002038 5002340 -81675208 + AluSx SINE Alu 1 304 -8 836 91 25 0 chr18 5002350 5002471 -81675077 + AluSq/x SINE Alu 1 124 -188 1219 232 71 53 chr18 5002572 5002652 -81674896 + MER39 LTR ERV1 305 382 -325 1397 129 91 45 chr18 5002652 5002939 -81674609 - AluJo SINE Alu -12 300 1 1219 232 71 53 chr18 5002939 5003254 -81674294 + MER39 LTR ERV1 382 707 0 246 207 0 0 chr18 5004042 5004100 -81673448 + (TA)n Simple_repeat Simple_repeat 2 59 0 213 39 0 0 chr18 5004154 5004180 -81673368 + (T)n Simple_repeat Simple_repeat 1 26 0 1782 150 3 16 chr18 5004354 5004661 -81672887 - AluJb SINE Alu -9 303 1 436 349 143 16 chr18 5005174 5005489 -81672059 - L3 LINE CR1 -23 1554 1200 1267 154 60 82 chr18 5005493 5005812 -81671736 - AluJb SINE Alu 0 312 1 1005 212 101 42 chr18 5006088 5006237 -81671311 - MER5C DNA MER1_type 0 324 185 216 0 0 0 chr18 5006237 5006261 -81671287 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1005 212 101 42 chr18 5006261 5006324 -81671224 - MER5C DNA MER1_type -139 185 127 1946 115 0 59 chr18 5006324 5006645 -81670903 - AluSq SINE Alu -11 302 1 1005 212 101 42 chr18 5006645 5006737 -81670811 - MER5C DNA MER1_type -197 127 1 678 224 28 65 chr18 5006750 5006964 -81670584 + MER63A DNA MER1_type 5 210 0 1978 131 3 0 chr18 5007008 5007305 -81670243 + AluSq SINE Alu 1 298 -15 29 47 0 0 chr18 5007623 5007666 -81669882 + AT_rich Low_complexity Low_complexity 1 43 0 2033 127 3 19 chr18 5008002 5008317 -81669231 - AluSx SINE Alu -2 310 1 2255 89 0 3 chr18 5008409 5008713 -81668835 - AluSc SINE Alu 0 309 7 2199 88 3 0 chr18 5008747 5009041 -81668507 - AluSp SINE Alu -18 295 1 1726 74 283 179 chr18 5009331 5009805 -81667743 - LTR12 LTR ERV1 -133 581 59 282 211 0 0 chr18 5009807 5009859 -81667689 - LTR30 LTR ERV1 -670 52 1 2028 107 21 0 chr18 5009865 5010156 -81667392 + AluSq SINE Alu 2 298 -15 568 221 8 30 chr18 5010596 5010727 -81666821 + FLAM_A SINE Alu 1 128 -14 751 178 0 30 chr18 5011421 5011556 -81665992 - FLAM_C SINE Alu -11 132 2 1715 149 7 24 chr18 5012161 5012457 -81665091 + AluJo SINE Alu 1 291 -21 426 224 138 78 chr18 5013070 5013302 -81664246 - MER112 DNA MER1_type -6 254 9 242 217 98 98 chr18 5013992 5014084 -81663464 + MIR3 SINE MIR 103 194 -14 280 180 8 0 chr18 5014097 5014153 -81663395 - MIR SINE MIR -91 117 57 294 212 50 10 chr18 5015006 5015105 -81662443 + L1ME4a LINE L1 6017 6119 -2 1956 93 35 14 chr18 5015166 5015456 -81662092 - AluSq SINE Alu -17 296 1 1307 161 157 4 chr18 5015514 5015781 -81661767 - AluJo SINE Alu -4 308 1 410 265 59 53 chr18 5016035 5016373 -81661175 + MLT1L LTR MaLR 2 411 -204 1821 122 35 3 chr18 5016373 5016660 -81660888 + AluSp SINE Alu 1 296 -17 410 265 59 53 chr18 5016660 5016691 -81660857 + MLT1L LTR MaLR 411 440 -175 290 205 51 51 chr18 5016882 5016960 -81660588 + LTR48B LTR ERV1 1 78 -566 627 168 199 37 chr18 5016962 5017123 -81660425 + MER39 LTR ERV1 284 470 -237 2016 105 31 0 chr18 5017166 5017452 -81660096 - AluSx SINE Alu -17 295 1 1117 148 0 21 chr18 5017480 5017669 -81659879 - AluJo SINE Alu -125 187 3 514 231 15 15 chr18 5017672 5017806 -81659742 + MER39 LTR ERV1 554 687 -20 431 279 81 12 chr18 5017834 5017995 -81659553 + MIR SINE MIR 44 215 -47 2350 82 0 22 chr18 5018100 5018419 -81659129 + AluSq SINE Alu 1 312 -1 1736 142 137 57 chr18 5018471 5018872 -81658676 + LTR49 LTR ERV1 3 435 -160 1618 150 17 27 chr18 5018877 5019177 -81658371 + AluSx SINE Alu 1 297 -15 955 136 7 0 chr18 5019320 5019467 -81658081 + FRAM SINE Alu 11 158 -18 635 185 0 0 chr18 5020410 5020518 -81657030 + FLAM_A SINE Alu 12 119 -23 406 292 15 51 chr18 5020532 5020727 -81656821 + MIR SINE MIR 49 236 -26 2059 95 20 10 chr18 5021167 5021462 -81656086 - AluSq SINE Alu -15 298 1 1521 142 24 24 chr18 5021659 5021948 -81655600 - AluJo SINE Alu -10 302 14 232 196 103 62 chr18 5022087 5022184 -81655364 + MIR SINE MIR 112 212 -50 2060 96 14 0 chr18 5022254 5022545 -81655003 - AluSq SINE Alu -18 295 1 861 39 10 0 chr18 5022915 5023019 -81654529 + AluSp SINE Alu 29 133 -180 226 259 0 0 chr18 5023146 5023200 -81654348 + A-rich Low_complexity Low_complexity 1 54 0 23 0 0 0 chr18 5023231 5023254 -81654294 + AT_rich Low_complexity Low_complexity 1 23 0 2143 121 0 3 chr18 5023254 5023567 -81653981 - AluSx SINE Alu 0 312 1 2032 114 0 10 chr18 5024507 5024805 -81652743 - AluSx SINE Alu -17 295 1 2016 121 7 23 chr18 5024805 5025111 -81652437 - AluSx SINE Alu -10 302 1 831 171 8 0 chr18 5025226 5025355 -81652193 + FLAM_A SINE Alu 1 130 -3 183 315 235 13 chr18 5026056 5026205 -81651343 + MER5A DNA MER1_type 8 189 0 2153 137 0 3 chr18 5026474 5026787 -81650761 + AluSq SINE Alu 1 312 -1 39 15 0 46 chr18 5027966 5028031 -81649517 + AT_rich Low_complexity Low_complexity 1 62 0 1250 171 167 0 chr18 5028261 5028513 -81649035 - L1PB3 LINE L1 0 6154 5861 186 43 0 0 chr18 5028674 5028697 -81648851 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2314 100 3 0 chr18 5028717 5029018 -81648530 - AluSg SINE Alu -8 302 1 2022 136 13 7 chr18 5029028 5029336 -81648212 - AluSq SINE Alu -3 310 1 1197 68 17 6 chr18 5029346 5029523 -81648025 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2290 85 19 10 chr18 5029540 5029847 -81647701 - AluSg SINE Alu 0 310 1 2007 176 17 6 chr18 5029857 5030216 -81647332 - L1PA16 LINE L1 0 6166 5804 794 81 7 40 chr18 5030269 5030418 -81647130 + (GAA)n Simple_repeat Simple_repeat 1 144 0 2349 86 0 0 chr18 5030766 5031058 -81646490 - AluSg SINE Alu -18 292 1 3745 192 53 44 chr18 5031059 5031276 -81646272 + L1MCa LINE L1 1934 2148 -4278 2251 98 10 0 chr18 5031276 5031571 -81645977 + AluSg SINE Alu 1 298 -12 3745 192 53 44 chr18 5031571 5031823 -81645725 + L1MCa LINE L1 2148 2396 -4030 3864 93 14 0 chr18 5031823 5032330 -81645218 - MER75 DNA T2_type 0 514 1 3745 192 53 44 chr18 5032330 5032663 -81644885 + L1MCa LINE L1 2396 2725 -3701 1940 124 37 0 chr18 5032663 5032959 -81644589 + AluSx SINE Alu 1 306 0 3745 192 53 44 chr18 5032959 5033252 -81644296 + L1MCa LINE L1 2725 3014 -3412 1623 122 0 0 chr18 5033252 5033474 -81644074 - AluSq SINE Alu -15 298 77 3745 192 53 44 chr18 5033474 5033660 -81643888 + L1MCa LINE L1 3014 3197 -3229 2185 107 3 3 chr18 5033660 5033951 -81643597 - AluSg SINE Alu -18 292 2 3745 192 53 44 chr18 5033951 5034293 -81643255 + L1MCa LINE L1 3197 3575 -2851 320 233 0 0 chr18 5034293 5034353 -81643195 - AluJ/FLAM SINE Alu -237 65 6 3812 168 67 6 chr18 5034360 5035061 -81642487 + L1MC1 LINE L1 5584 6327 -6 237 291 38 13 chr18 5035093 5035172 -81642376 + MIR SINE MIR 152 232 -30 2317 78 3 0 chr18 5035352 5035663 -81641885 - AluSq SINE Alu 0 312 1 2282 108 7 0 chr18 5037359 5037666 -81639882 + AluSx SINE Alu 1 309 -3 1027 279 21 18 chr18 5038085 5038418 -81639130 + HAL1 LINE L1 1 334 -2173 1211 262 40 51 chr18 5038434 5038987 -81638561 + HAL1 LINE L1 405 951 -1556 1913 94 41 4 chr18 5039227 5039494 -81638054 - AluSp SINE Alu -36 277 1 27 62 0 0 chr18 5039537 5039585 -81637963 + AT_rich Low_complexity Low_complexity 1 48 0 755 266 105 4 chr18 5039710 5039939 -81637609 + MIR SINE MIR 4 255 -7 210 288 81 63 chr18 5040571 5040682 -81636866 - L2 LINE L2 0 3313 3201 2596 37 0 0 chr18 5040706 5041002 -81636546 + AluY SINE Alu 1 296 -15 276 237 101 79 chr18 5041084 5041223 -81636325 - LTR50 LTR ERVL -636 159 18 2370 58 0 0 chr18 5042157 5042485 -81635063 + AluY SINE Alu 7 334 0 308 297 94 25 chr18 5042677 5043037 -81634511 + L1ME4a LINE L1 2750 3134 -3012 1585 201 16 3 chr18 5043263 5043571 -81633977 + AluJo SINE Alu 1 312 0 2248 110 0 0 chr18 5043751 5044043 -81633505 - AluSq SINE Alu -19 294 3 302 314 42 8 chr18 5044049 5044167 -81633381 + L1ME4a LINE L1 3623 3744 -2402 25 0 0 0 chr18 5044187 5044212 -81633336 + AT_rich Low_complexity Low_complexity 1 25 0 460 255 0 0 chr18 5044221 5044323 -81633225 + U13 snRNA snRNA 1 102 -2 2146 119 0 7 chr18 5044515 5044840 -81632708 + AluSx SINE Alu 1 323 0 1046 67 0 0 chr18 5045060 5045194 -81632354 + AluSp/q SINE Alu 175 308 -5 2071 73 4 7 chr18 5045445 5045720 -81631828 + AluSc SINE Alu 1 274 -35 205 143 0 41 chr18 5045735 5045764 -81631784 + (TAAA)n Simple_repeat Simple_repeat 2 30 -18 1679 193 3 0 chr18 5045764 5046054 -81631494 + 7SLRNA srpRNA srpRNA 6 296 -24 205 143 0 41 chr18 5046054 5046073 -81631475 + (TAAA)n Simple_repeat Simple_repeat 30 48 0 304 276 19 108 chr18 5046085 5046299 -81631249 + L1ME4a LINE L1 4498 4692 -1454 2043 125 10 10 chr18 5046327 5046624 -81630924 - AluJo SINE Alu -15 297 1 1995 120 0 0 chr18 5046722 5046989 -81630559 + AluSx SINE Alu 31 297 -15 1762 151 35 111 chr18 5047058 5047428 -81630120 - Tigger3(Golem) DNA MER2_type -7 3022 1 236 328 38 27 chr18 5047783 5047966 -81629582 + L1ME4a LINE L1 5197 5381 -765 2214 93 4 0 chr18 5047973 5048278 -81629270 + AluSg SINE Alu 3 308 0 2394 76 0 0 chr18 5048285 5048575 -81628973 + AluY SINE Alu 1 290 -21 208 246 0 0 chr18 5048581 5048638 -81628910 + (TA)n Simple_repeat Simple_repeat 2 58 0 2091 120 7 0 chr18 5049072 5049364 -81628184 + AluSx SINE Alu 1 294 -18 388 0 39 0 chr18 5050176 5050228 -81627320 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 283 327 45 9 chr18 5050409 5050519 -81627029 + L2 LINE L2 3154 3267 -5 279 211 32 21 chr18 5050803 5050898 -81626650 + (TA)n Simple_repeat Simple_repeat 1 96 0 282 56 0 0 chr18 5050900 5050936 -81626612 - MADE1 DNA Mariner -44 36 1 417 289 113 32 chr18 5050964 5051275 -81626273 + L1ME4a LINE L1 5548 5883 -238 2375 81 0 25 chr18 5051398 5051718 -81625830 - AluSx SINE Alu 0 312 1 2154 87 4 4 chr18 5051718 5051995 -81625553 - AluSq SINE Alu -36 277 1 2235 102 0 7 chr18 5052290 5052593 -81624955 - AluSg SINE Alu -9 301 1 402 251 74 0 chr18 5052613 5052739 -81624809 - MIR SINE MIR -65 143 13 1808 154 3 7 chr18 5053267 5053565 -81623983 + AluSg SINE Alu 1 297 -13 2120 131 0 3 chr18 5053837 5054135 -81623413 - AluSx SINE Alu -13 299 3 21 57 0 0 chr18 5054644 5054679 -81622869 + AT_rich Low_complexity Low_complexity 1 35 0 2286 89 0 3 chr18 5056250 5056542 -81621006 + AluSg SINE Alu 5 295 -15 1762 151 35 111 chr18 5056611 5056981 -81620567 - Tigger3(Golem) DNA MER2_type -6 3023 1 236 328 38 27 chr18 5057336 5057519 -81620029 + L1ME4a LINE L1 5197 5381 -765 2214 93 4 0 chr18 5057526 5057831 -81619717 + AluSg SINE Alu 3 308 0 2441 82 0 0 chr18 5057838 5058142 -81619406 + AluY SINE Alu 1 304 -7 200 213 0 0 chr18 5058144 5058191 -81619357 + (TA)n Simple_repeat Simple_repeat 1 47 0 2056 119 7 3 chr18 5058626 5058919 -81618629 + AluSx SINE Alu 1 294 -18 388 0 39 0 chr18 5059731 5059783 -81617765 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 283 327 45 9 chr18 5059964 5060074 -81617474 + L2 LINE L2 3154 3267 -5 279 211 32 21 chr18 5060358 5060453 -81617095 + (TA)n Simple_repeat Simple_repeat 1 96 0 282 56 0 0 chr18 5060455 5060491 -81617057 - MADE1 DNA Mariner -44 36 1 404 293 113 32 chr18 5060519 5060830 -81616718 + L1ME4a LINE L1 5548 5883 -238 2291 85 0 31 chr18 5060953 5061272 -81616276 - AluSc SINE Alu 0 309 1 1984 117 7 7 chr18 5061384 5061674 -81615874 + AluSx SINE Alu 9 298 -14 612 201 67 15 chr18 5061725 5061859 -81615689 + MIR SINE MIR 12 152 -110 7303 154 38 53 chr18 5061880 5063057 -81614491 + L1MCa LINE L1 46 1198 -5228 2422 93 3 0 chr18 5063057 5063368 -81614180 + AluSp SINE Alu 1 312 -1 7303 154 38 53 chr18 5063368 5063699 -81613849 + L1MCa LINE L1 1198 1532 -4894 1701 184 10 3 chr18 5063699 5064019 -81613529 + AluJb SINE Alu 1 312 0 1265 135 24 10 chr18 5064035 5064286 -81613262 + AluSc SINE Alu 1 304 -5 192 267 139 0 chr18 5064576 5064662 -81612886 + MIR SINE MIR 117 214 -48 1492 138 84 22 chr18 5064827 5065102 -81612446 + AluSx SINE Alu 2 293 -19 2132 116 3 3 chr18 5065144 5065446 -81612102 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr18 5065694 5065729 -81611819 + AT_rich Low_complexity Low_complexity 1 35 0 2255 91 0 10 chr18 5067300 5067598 -81609950 + AluSg SINE Alu 5 299 -11 802 171 0 8 chr18 5068268 5068391 -81609157 - FLAM_C SINE Alu -16 127 6 407 229 100 7 chr18 5068411 5068551 -81608997 - L1MA9 LINE L1 -30 6282 6130 638 104 9 87 chr18 5068580 5068695 -81608853 - L1MB1 LINE L1 -307 5882 5777 1534 201 6 32 chr18 5068696 5069010 -81608538 - AluJo SINE Alu -6 306 1 330 132 0 33 chr18 5069016 5069117 -81608431 - L1MB1 LINE L1 -791 5363 5270 2380 57 0 10 chr18 5069135 5069433 -81608115 - AluY SINE Alu -16 295 1 1009 235 2 59 chr18 5069433 5069591 -81607957 - L1 LINE L1 -811 5335 5170 2308 101 0 19 chr18 5069591 5069908 -81607640 - AluSx SINE Alu -1 311 1 1009 235 2 59 chr18 5069908 5070155 -81607393 - L1 LINE L1 -976 5170 4845 2041 132 17 0 chr18 5070156 5070452 -81607096 + AluSx SINE Alu 1 301 -11 402 134 0 0 chr18 5070651 5070718 -81606830 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 2279 90 37 10 chr18 5070832 5071132 -81606416 - AluSp SINE Alu -5 308 1 2382 90 0 3 chr18 5071146 5071456 -81606092 - AluY SINE Alu -2 309 1 369 0 0 0 chr18 5071768 5071809 -81605739 + (CA)n Simple_repeat Simple_repeat 2 42 0 1935 138 7 13 chr18 5071892 5072197 -81605351 + AluSx SINE Alu 4 306 -6 246 62 0 0 chr18 5072197 5072229 -81605319 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 409 86 0 0 chr18 5073053 5073111 -81604437 + L1MA1 LINE L1 6241 6298 -4 1081 160 0 0 chr18 5073145 5073301 -81604247 + FRAM SINE Alu 1 156 -10 361 171 86 0 chr18 5073613 5073683 -81603865 - AluJ/FRAM SINE Alu -2 300 225 1246 153 5 0 chr18 5073684 5073874 -81603674 - AluSx SINE Alu -121 191 1 253 278 51 51 chr18 5073986 5074162 -81603386 + MER104 DNA Tc2 5 180 0 2412 93 3 0 chr18 5074277 5074587 -81602961 - AluSp SINE Alu -2 311 1 264 229 135 31 chr18 5074588 5074684 -81602864 - L1MC5 LINE L1 -44 7917 7812 973 132 7 0 chr18 5074732 5074868 -81602680 + AluSq/x SINE Alu 3 139 -174 2220 74 7 7 chr18 5075000 5075320 -81602228 - AluSq SINE Alu 0 320 1 859 263 50 4 chr18 5075326 5075607 -81601941 + L1MC4a LINE L1 5693 5986 -1822 1315 134 38 0 chr18 5075703 5075912 -81601636 - AluJb SINE Alu -10 302 86 30 59 0 0 chr18 5075938 5075989 -81601559 + AT_rich Low_complexity Low_complexity 1 51 0 1817 161 38 0 chr18 5076720 5077011 -81600537 + AluJo SINE Alu 1 302 -10 381 75 0 0 chr18 5077246 5077299 -81600249 + (CA)n Simple_repeat Simple_repeat 2 54 0 1408 152 8 13 chr18 5077852 5078089 -81599459 - MER46A DNA MER2_type 0 236 1 284 298 61 61 chr18 5078242 5078423 -81599125 + MIR SINE MIR 79 259 -3 1265 261 60 24 chr18 5078497 5078914 -81598634 + L1MC4a LINE L1 5517 5948 -1860 272 91 23 0 chr18 5078914 5078958 -81598590 + (GAAA)n Simple_repeat Simple_repeat 4 48 0 2642 56 0 0 chr18 5079053 5079356 -81598192 + AluY SINE Alu 1 303 -8 1777 172 0 10 chr18 5079498 5079788 -81597760 - AluJo SINE Alu -13 299 13 2201 96 11 0 chr18 5080323 5080655 -81596893 + AluSq SINE Alu 1 335 0 23 0 0 0 chr18 5081004 5081027 -81596521 + AT_rich Low_complexity Low_complexity 1 23 0 1336 149 0 28 chr18 5081185 5081400 -81596148 + AluJo SINE Alu 89 297 -15 2186 89 10 0 chr18 5081413 5081704 -81595844 + AluSc SINE Alu 11 304 -5 1817 112 93 4 chr18 5082285 5082553 -81594995 + AluSx SINE Alu 2 293 -19 2028 120 0 0 chr18 5082590 5082866 -81594682 + AluSx SINE Alu 1 276 -36 214 268 41 62 chr18 5183453 5183550 -81493998 - MIR SINE MIR -81 181 87 305 281 85 89 chr18 5184322 5184603 -81492945 - L1M2 LINE L1 -5716 1133 854 1521 144 30 8 chr18 5184752 5185015 -81492533 - AluJo SINE Alu -33 279 11 2161 92 4 4 chr18 5185438 5185743 -81491805 + AluSx SINE Alu 1 305 0 514 171 0 11 chr18 5186182 5186270 -81491278 - Tigger7 DNA MER2_type 0 2487 2401 21 0 0 0 chr18 5186270 5186291 -81491257 + AT_rich Low_complexity Low_complexity 1 21 0 303 71 0 0 chr18 5186291 5186333 -81491215 + (CA)n Simple_repeat Simple_repeat 2 43 0 2285 76 3 3 chr18 5186977 5187267 -81490281 - AluY SINE Alu -21 290 1 366 266 143 13 chr18 5187525 5187679 -81489869 - L2 LINE L2 -2 3270 3097 995 166 6 17 chr18 5188328 5188503 -81489045 + AluJo SINE Alu 2 174 -138 210 91 0 0 chr18 5189656 5189689 -81487859 + (TC)n Simple_repeat Simple_repeat 1 33 0 430 296 175 5 chr18 5190649 5190838 -81486710 + MIR SINE MIR 26 246 -16 431 261 37 45 chr18 5190886 5191020 -81486528 + MIR SINE MIR 9 141 -121 322 308 37 0 chr18 5191180 5191287 -81486261 - MIR3 SINE MIR -45 163 53 377 392 29 17 chr18 5192350 5192590 -81484958 + MIR SINE MIR 9 251 -11 207 0 0 0 chr18 5192812 5192835 -81484713 + (TTTTTG)n Simple_repeat Simple_repeat 4 26 0 332 269 172 7 chr18 5193046 5193191 -81484357 + MIR3 SINE MIR 38 206 -2 2937 6 0 0 chr18 5193616 5193929 -81483619 - AluYb8 SINE Alu -5 313 1 991 176 0 31 chr18 5193929 5194122 -81483426 - MER46A DNA MER2_type -47 189 3 469 207 53 65 chr18 5193982 5194151 -81483397 + MER46A DNA MER2_type 3 169 -67 * 675 301 27 11 chr18 5194161 5194347 -81483201 - MIR SINE MIR -29 233 45 225 0 0 0 chr18 5194744 5194769 -81482779 + (TAAAG)n Simple_repeat Simple_repeat 1 25 0 210 22 0 87 chr18 5195815 5195861 -81481687 + (CAAAAA)n Simple_repeat Simple_repeat 1 42 0 252 254 60 0 chr18 5196339 5196406 -81481142 + L2 LINE L2 3201 3271 -1 893 223 161 21 chr18 5197905 5198291 -81479257 - MER113 DNA MER1_type? -81 440 1 222 128 0 85 chr18 5198291 5198338 -81479210 + L2 LINE L2 3271 3313 0 23 0 0 0 chr18 5200548 5200571 -81476977 + AT_rich Low_complexity Low_complexity 1 23 0 212 0 0 35 chr18 5200809 5200838 -81476710 + (TTA)n Simple_repeat Simple_repeat 2 29 0 2575 77 0 0 chr18 5200921 5201232 -81476316 + AluY SINE Alu 1 311 0 846 147 62 104 chr18 5202816 5203027 -81474521 - MER2 DNA MER2_type -138 207 6 397 286 121 19 chr18 5204242 5204407 -81473141 - MER5B DNA MER1_type -5 184 1 265 325 89 32 chr18 5206448 5206571 -81470977 + MIR3 SINE MIR 33 162 -46 585 213 226 7 chr18 5207414 5207569 -81469979 + MER5A DNA MER1_type 1 189 0 230 342 133 8 chr18 5207772 5207892 -81469656 - L2 LINE L2 -4 3268 3134 536 226 7 22 chr18 5207935 5208072 -81469476 - L2 LINE L2 -18 3295 3161 28 29 0 0 chr18 5208088 5208123 -81469425 + AT_rich Low_complexity Low_complexity 1 35 0 186 330 52 31 chr18 5208245 5208342 -81469206 + MIR3 SINE MIR 59 157 -51 1512 164 84 11 chr18 5208609 5208896 -81468652 - AluJo SINE Alu -4 308 1 4452 153 24 54 chr18 5209554 5210272 -81467276 - L1MA9 LINE L1 -146 6166 5479 1613 181 40 0 chr18 5210272 5210549 -81466999 - AluJb SINE Alu -24 288 1 4452 153 24 54 chr18 5210549 5210731 -81466817 - L1MA9 LINE L1 -833 5479 5293 232 103 0 0 chr18 5211405 5211444 -81466104 - L1M2 LINE L1 -695 5617 5579 2251 167 3 21 chr18 5212393 5212765 -81464783 + MER47A DNA MER2_type 1 365 -1 224 309 73 0 chr18 5213876 5213944 -81463604 + MIR3 SINE MIR 98 170 -38 470 294 149 35 chr18 5215146 5215374 -81462174 - MIR SINE MIR -2 260 7 2191 97 3 35 chr18 5215569 5215880 -81461668 + AluSx SINE Alu 3 303 -9 228 86 0 0 chr18 5216104 5216139 -81461409 + (CATTG)n Simple_repeat Simple_repeat 4 38 0 369 333 0 0 chr18 5216678 5216780 -81460768 + MIR SINE MIR 47 148 -60 324 284 37 22 chr18 5217345 5217479 -81460069 - L2 LINE L2 -958 2356 2221 274 352 20 32 chr18 5217583 5217830 -81459718 - L2 LINE L2 -1318 1996 1753 529 278 71 102 chr18 5218034 5218357 -81459191 - L1MC4a LINE L1 -1914 5894 5597 2037 148 0 3 chr18 5218357 5218662 -81458886 + AluSx SINE Alu 1 304 -8 529 278 71 102 chr18 5218662 5218945 -81458603 - L1MC4a LINE L1 -2211 5597 5307 310 356 43 39 chr18 5220058 5220288 -81457260 - L3 LINE CR1 -33 1544 1314 2195 113 0 0 chr18 5220467 5220758 -81456790 - AluSx SINE Alu -20 292 2 21 0 0 0 chr18 5220791 5220812 -81456736 + AT_rich Low_complexity Low_complexity 1 21 0 420 224 212 73 chr18 5221483 5221606 -81455942 + L1MC4 LINE L1 6424 6516 -1292 1109 184 22 45 chr18 5221606 5221829 -81455719 - MER20 DNA MER1_type 0 219 2 420 224 212 73 chr18 5221829 5221948 -81455600 + L1MC4 LINE L1 6516 6617 -1191 210 191 0 0 chr18 5221998 5222045 -81455503 + (TA)n Simple_repeat Simple_repeat 1 47 0 2198 176 82 58 chr18 5222093 5222700 -81454848 + L1MC4 LINE L1 6648 7269 -773 932 267 26 0 chr18 5224135 5224367 -81453181 - MIR SINE MIR -16 246 9 2058 131 161 13 chr18 5224414 5224787 -81452761 + MSTA LTR MaLR 1 428 0 427 254 76 118 chr18 5225390 5225838 -81451710 - L1ME LINE L1 -381 5740 5312 303 375 55 0 chr18 5227041 5227169 -81450379 - MER5A DNA MER1_type -2 187 53 210 207 0 0 chr18 5230072 5230130 -81447418 + GA-rich Low_complexity Low_complexity 1 58 0 411 345 36 26 chr18 5230478 5230677 -81446871 + MIR SINE MIR 3 201 -61 228 281 83 16 chr18 5231347 5231468 -81446080 - MIR SINE MIR -128 134 6 2417 122 25 17 chr18 5232809 5233170 -81444378 - THE1B LTR MaLR 0 364 1 526 320 17 0 chr18 5233409 5233584 -81443964 + MIR SINE MIR 11 188 -74 397 274 198 15 chr18 5233845 5234108 -81443440 - L2 LINE L2 -76 3237 2927 440 266 32 24 chr18 5234137 5234261 -81443287 + L2 LINE L2 3189 3313 0 473 321 202 0 chr18 5234261 5234563 -81442985 - L2 LINE L2 -418 2896 2534 2116 119 20 16 chr18 5234748 5235051 -81442497 + AluSx SINE Alu 9 312 0 205 131 33 0 chr18 5235054 5235115 -81442433 + (CAAA)n Simple_repeat Simple_repeat 1 63 0 2644 212 21 13 chr18 5235509 5236037 -81441511 + MLT1F LTR MaLR 1 532 -10 1488 182 0 8 chr18 5237325 5237578 -81439970 - AluJb SINE Alu -25 287 37 491 302 78 22 chr18 5237776 5238008 -81439540 - MIR SINE MIR -13 249 5 2283 147 14 14 chr18 5239307 5239675 -81437873 + MLT1B LTR MaLR 15 382 -8 2047 118 7 27 chr18 5239824 5240121 -81437427 + AluSg SINE Alu 1 291 -19 702 240 156 5 chr18 5240654 5240846 -81436702 + MIR SINE MIR 8 228 -34 1213 30 0 0 chr18 5241269 5241404 -81436144 + L1PA2 LINE L1 6021 6155 0 2183 95 95 0 chr18 5244221 5244536 -81433012 + L1PB1 LINE L1 5806 6150 -1 24 0 0 0 chr18 5244536 5244560 -81432988 + AT_rich Low_complexity Low_complexity 1 24 0 286 248 38 98 chr18 5244824 5244957 -81432591 + LTR33A LTR ERVL 59 183 -340 232 238 32 0 chr18 5245128 5245191 -81432357 + LTR50 LTR ERVL 731 795 0 2244 159 21 19 chr18 5246365 5246737 -81430811 + THE1C LTR MaLR 3 375 0 3742 141 2 14 chr18 5247953 5248543 -81429005 - L1PB4 LINE L1 -2 6154 5572 882 240 170 16 chr18 5249486 5249803 -81427745 + L1MEc LINE L1 42 407 -5989 1542 246 16 16 chr18 5249804 5250186 -81427362 + L1MEc LINE L1 433 814 -5582 2388 80 0 7 chr18 5250200 5250499 -81427049 + AluSp SINE Alu 1 297 -16 822 258 92 32 chr18 5250506 5251093 -81426455 + L1MEc LINE L1 848 1652 -4744 2421 66 3 3 chr18 5251118 5251419 -81426129 - AluY SINE Alu -10 301 1 1956 149 0 17 chr18 5251421 5251723 -81425825 - AluJb SINE Alu -15 297 1 2548 180 59 27 chr18 5251764 5252253 -81425295 + MLT1D LTR MaLR 1 505 0 23 68 0 0 chr18 5252421 5252465 -81425083 + AT_rich Low_complexity Low_complexity 1 44 0 2265 96 0 48 chr18 5252666 5252980 -81424568 - AluSq SINE Alu -14 299 1 312 136 0 0 chr18 5253042 5253086 -81424462 - Alu SINE Alu -258 44 1 2011 121 11 0 chr18 5254156 5254467 -81423081 + AluSx SINE Alu 1 314 0 1318 207 10 23 chr18 5254469 5254774 -81422774 - MER33 DNA MER1_type -20 304 4 212 180 98 33 chr18 5255124 5255185 -81422363 - MER5A DNA MER1_type 0 189 125 854 172 33 39 chr18 5255185 5255365 -81422183 + FRAM SINE Alu 1 176 0 800 206 0 0 chr18 5255366 5255507 -81422041 - MER5A DNA MER1_type -48 141 1 240 294 0 0 chr18 5256213 5256264 -81421284 - MER115 DNA AcHobo 0 693 643 * 809 284 89 44 chr18 5256262 5256698 -81420850 - MER115 DNA AcHobo -237 456 1 351 302 220 41 chr18 5256984 5257498 -81420050 - HAL1 LINE L1 -789 1718 1113 180 0 0 0 chr18 5258355 5258375 -81419173 + (T)n Simple_repeat Simple_repeat 1 20 0 796 215 34 10 chr18 5258613 5258822 -81418726 + Charlie5 DNA MER1_type 2401 2614 0 1958 285 136 40 chr18 5260364 5260437 -81417111 - L2 LINE L2 -1 3312 3247 2192 106 24 0 chr18 5260437 5260730 -81416818 + AluSx SINE Alu 1 300 -12 1958 285 136 40 chr18 5260730 5261878 -81415670 - L2 LINE L2 -66 3247 1959 213 282 48 39 chr18 5262001 5262104 -81415444 - L2 LINE L2 -15 3257 3154 1085 187 11 0 chr18 5262156 5262343 -81415205 + MER5A DNA MER1_type 1 189 0 231 309 48 24 chr18 5263141 5263225 -81414323 + L2 LINE L2 3182 3267 -5 803 144 0 0 chr18 5267001 5267119 -81410429 + AluJb SINE Alu 1 118 -194 27 0 0 0 chr18 5267119 5267146 -81410402 + AT_rich Low_complexity Low_complexity 1 27 0 198 103 0 0 chr18 5267279 5267308 -81410240 + (TC)n Simple_repeat Simple_repeat 1 29 0 1731 190 32 32 chr18 5268586 5268845 -81408703 - MER7A DNA MER2_type -2693 345 86 1723 106 0 4 chr18 5268845 5269082 -81408466 - AluSc SINE Alu -10 299 64 1731 190 32 32 chr18 5269082 5269169 -81408379 - MER7A DNA MER2_type -2951 87 1 25 31 0 0 chr18 5269548 5269580 -81407968 + AT_rich Low_complexity Low_complexity 1 32 0 2214 138 18 31 chr18 5269583 5269973 -81407575 + L1MB2 LINE L1 5785 6169 -2 4903 155 51 13 chr18 5269976 5270837 -81406711 + L1MB3 LINE L1 5232 6135 -48 1901 94 94 0 chr18 5270837 5270964 -81406584 + AluSp SINE Alu 1 115 -198 282 56 0 0 chr18 5270964 5271000 -81406548 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1901 94 94 0 chr18 5271000 5271138 -81406410 + AluSp SINE Alu 115 291 -22 4903 155 51 13 chr18 5271138 5271187 -81406361 + L1MB3 LINE L1 6135 6181 -2 306 199 137 68 chr18 5271161 5271322 -81406226 - L1ME4a LINE L1 -20 6101 5930 * 441 294 54 39 chr18 5271396 5271729 -81405819 - L1ME4a LINE L1 -393 5728 5391 2086 134 10 0 chr18 5271837 5272144 -81405404 - AluSx SINE Alu -2 310 1 180 0 0 0 chr18 5272207 5272227 -81405321 + (T)n Simple_repeat Simple_repeat 1 20 0 2283 176 51 39 chr18 5273752 5273920 -81403628 + L1MA7 LINE L1 5739 5903 -388 1691 181 80 15 chr18 5273920 5274245 -81403303 + MER7A DNA MER2_type 3 346 0 2283 176 51 39 chr18 5274245 5274622 -81402926 + L1MA7 LINE L1 5903 6291 0 2213 120 0 10 chr18 5274626 5274960 -81402588 + AluSx SINE Alu 1 312 0 1326 143 0 40 chr18 5275511 5275762 -81401786 - L1MA8 LINE L1 -3 6288 6048 185 239 34 68 chr18 5277327 5277415 -81400133 + MIR SINE MIR 160 244 -18 182 302 36 86 chr18 5277460 5277599 -81399949 + L2 LINE L2 3179 3310 -3 21 36 0 0 chr18 5277874 5277902 -81399646 + AT_rich Low_complexity Low_complexity 1 28 0 523 180 18 0 chr18 5278934 5279045 -81398503 + MLT1B LTR MaLR 274 386 -4 215 163 23 0 chr18 5280093 5280136 -81397412 + MIR SINE MIR 217 260 -2 745 215 0 0 chr18 5281187 5281317 -81396231 - FLAM_A SINE Alu -3 130 1 212 238 70 0 chr18 5281896 5281953 -81395595 + MIR SINE MIR 89 150 -58 243 263 21 42 chr18 5282270 5282365 -81395183 - MIR SINE MIR -24 238 146 2148 82 28 2 chr18 5282659 5283046 -81394502 - Charlie3 DNA MER1_type -4 2706 2243 * 3124 100 38 0 chr18 5283043 5283495 -81394053 - Charlie3 DNA MER1_type -2212 498 30 238 132 0 0 chr18 5283526 5283564 -81393984 - Charlie3 DNA MER1_type -2671 39 2 212 283 248 26 chr18 5284001 5284312 -81393236 + L3 LINE CR1 1162 1541 -36 7619 19 1 1 chr18 5284417 5285439 -81392109 + L1PA4 LINE L1 5152 6174 0 1066 195 133 21 chr18 5285440 5285757 -81391791 + Charlie1 DNA MER1_type 2264 2633 -128 855 146 0 7 chr18 5285757 5285901 -81391647 - L1PA15 LINE L1 -2 6163 6021 1066 195 133 21 chr18 5285901 5285968 -81391580 + Charlie1 DNA MER1_type 2633 2691 -70 1859 157 4 0 chr18 5287169 5287471 -81390077 + AluJb SINE Alu 1 303 0 389 267 59 21 chr18 5289085 5289272 -81388276 + LTR33 LTR ERVL 324 517 -4 24 53 0 0 chr18 5290584 5290622 -81386926 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr18 5290847 5290870 -81386678 + AT_rich Low_complexity Low_complexity 1 23 0 361 110 0 121 chr18 5291056 5291147 -81386401 + Charlie5 DNA MER1_type 48 127 -2485 1075 172 41 10 chr18 5291147 5291438 -81386110 + Charlie5 DNA MER1_type 2233 2532 -80 36 62 0 0 chr18 5291804 5291868 -81385680 + AT_rich Low_complexity Low_complexity 1 64 0 435 184 0 0 chr18 5292249 5292336 -81385212 - L1MC5 LINE L1 -525 7436 7350 367 55 18 0 chr18 5292336 5292391 -81385157 - L1MC5 LINE L1 -569 7392 7337 969 134 27 113 chr18 5292399 5292728 -81384820 - MER33 DNA MER1_type 0 324 24 1397 205 38 48 chr18 5292739 5293159 -81384389 - L1MC5 LINE L1 -621 7340 6925 633 211 54 12 chr18 5293219 5293442 -81384106 - L1MC5 LINE L1 -1009 6805 6554 413 295 132 64 chr18 5293501 5294046 -81383502 - L1MC4a LINE L1 -1341 6467 5886 23 68 0 0 chr18 5294127 5294171 -81383377 + AT_rich Low_complexity Low_complexity 1 44 0 242 224 16 144 chr18 5294307 5294432 -81383116 + MER5C DNA MER1_type 16 124 -200 217 111 56 0 chr18 5294496 5294532 -81383016 + MER5C DNA MER1_type 286 323 -1 1860 169 0 10 chr18 5294580 5294888 -81382660 - AluJo SINE Alu -7 305 1 563 299 61 38 chr18 5295364 5295809 -81381739 - HAL1b LINE L1 -745 603 149 21 36 0 0 chr18 5295860 5295888 -81381660 + AT_rich Low_complexity Low_complexity 1 28 0 1961 144 43 70 chr18 5297094 5297539 -81380009 + Tigger2a DNA MER2_type 1 433 -1 351 65 0 0 chr18 5299681 5299727 -81377821 + (TG)n Simple_repeat Simple_repeat 2 47 0 192 297 93 25 chr18 5300128 5300246 -81377302 + L2 LINE L2 2316 2441 -873 267 281 123 26 chr18 5300282 5300396 -81377152 - L2 LINE L2 -2 3270 3146 1747 182 0 7 chr18 5301422 5301719 -81375829 - AluJb SINE Alu -15 297 3 822 286 73 22 chr18 5302093 5302449 -81375099 + LTR16B LTR ERVL 1 374 -90 431 264 121 41 chr18 5302843 5302982 -81374566 + MLT1I LTR MaLR 1 128 -281 1929 116 6 42 chr18 5302982 5303317 -81374231 + L1PA15 LINE L1 5843 6165 0 431 264 121 41 chr18 5303317 5303492 -81374056 + MLT1I LTR MaLR 128 340 -69 1322 114 88 65 chr18 5304781 5305044 -81372504 - MSTA LTR MaLR 0 428 160 241 156 0 125 chr18 5305035 5305068 -81372480 - MSTA LTR MaLR -372 56 20 * 2583 122 0 5 chr18 5305068 5305445 -81372103 + THE1C LTR MaLR 1 375 0 9886 124 46 5 chr18 5305445 5306962 -81370586 + THE1C-int LTR MaLR 1 1580 0 2671 101 8 8 chr18 5306962 5307337 -81370211 + THE1C LTR MaLR 1 375 0 241 156 0 125 chr18 5307337 5307365 -81370183 - MSTA LTR MaLR -405 23 1 255 278 53 90 chr18 5308078 5308211 -81369337 + MIR SINE MIR 79 206 -56 313 363 133 0 chr18 5308472 5308607 -81368941 + L2 LINE L2 3102 3254 -18 582 223 0 0 chr18 5308632 5308789 -81368759 + (TGGA)n Simple_repeat Simple_repeat 4 160 0 2074 143 0 0 chr18 5309344 5309645 -81367903 - AluSx SINE Alu -11 301 1 1577 199 10 10 chr18 5310492 5310788 -81366760 + AluJo SINE Alu 1 296 -16 682 224 99 0 chr18 5312650 5312802 -81364746 + FRAM SINE Alu 1 166 -10 192 40 0 0 chr18 5312963 5312988 -81364560 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 936 206 0 30 chr18 5312992 5313191 -81364357 - AluJb SINE Alu -34 278 86 453 76 15 0 chr18 5313694 5313760 -81363788 - MSTA LTR MaLR -332 96 30 298 0 23 23 chr18 5313798 5313841 -81363707 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2191 105 0 0 chr18 5313843 5314129 -81363419 - AluSg SINE Alu -24 286 1 198 0 0 0 chr18 5315022 5315044 -81362504 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1878 124 0 8 chr18 5315807 5316117 -81361431 - AluSx SINE Alu 0 325 18 218 293 0 0 chr18 5316782 5316823 -81360725 - L3b LINE CR1 -268 1315 1275 323 67 0 0 chr18 5317426 5317471 -81360077 - MADE1 DNA Mariner -5 75 31 824 231 105 8 chr18 5318249 5318487 -81359061 - MIR SINE MIR -1 261 1 563 235 7 13 chr18 5319611 5319764 -81357784 + MLT1D LTR MaLR 354 505 0 2118 137 0 0 chr18 5320619 5320912 -81356636 - AluSx SINE Alu -19 293 1 1142 198 56 5 chr18 5321269 5321574 -81355974 - MER39 LTR ERV1 -331 376 1 470 275 30 15 chr18 5321901 5322032 -81355516 + MIR3 SINE MIR 15 147 -61 274 146 0 0 chr18 5322659 5322700 -81354848 + MER5A DNA MER1_type 149 189 0 234 0 0 0 chr18 5322832 5322858 -81354690 + (ATG)n Simple_repeat Simple_repeat 3 28 0 369 0 0 0 chr18 5322858 5322899 -81354649 + (TG)n Simple_repeat Simple_repeat 2 42 0 768 122 0 0 chr18 5323374 5323481 -81354067 + U6 snRNA snRNA 1 107 0 5070 142 56 13 chr18 5323482 5324550 -81352998 + L1PB4 LINE L1 4639 5797 -359 2250 94 0 7 chr18 5324550 5324885 -81352663 - AluSq SINE Alu 0 333 1 5070 142 56 13 chr18 5324885 5325253 -81352295 + L1PB4 LINE L1 5797 6148 -8 237 135 0 0 chr18 5325255 5325307 -81352241 + (TA)n Simple_repeat Simple_repeat 1 52 0 218 309 129 35 chr18 5325639 5325840 -81351708 - L2 LINE L2 -217 3055 2836 459 0 0 0 chr18 5326012 5326063 -81351485 + (TG)n Simple_repeat Simple_repeat 2 52 0 373 288 176 39 chr18 5326084 5326135 -81351413 + MIR SINE MIR 2 45 -217 1285 185 117 15 chr18 5326135 5326400 -81351148 + AluJo SINE Alu 1 292 -10 373 288 176 39 chr18 5326400 5326553 -81350995 + MIR SINE MIR 45 234 -28 221 246 35 0 chr18 5327119 5327176 -81350372 + L2 LINE L2 3250 3308 -5 873 219 0 0 chr18 5327289 5327444 -81350104 + FRAM SINE Alu 5 159 -17 213 121 0 0 chr18 5328743 5328776 -81348772 + (TA)n Simple_repeat Simple_repeat 2 34 0 2598 55 0 0 chr18 5330041 5330349 -81347199 - AluY SINE Alu -3 308 1 214 328 37 22 chr18 5330870 5331004 -81346544 + L2 LINE L2 2704 2839 -475 896 260 110 9 chr18 5331199 5331526 -81346022 - MLT1J LTR MaLR -60 451 92 1919 114 6 45 chr18 5331635 5331993 -81345555 + L1MA2 LINE L1 5961 6304 0 221 306 116 74 chr18 5334647 5334768 -81342780 - L2 LINE L2 0 3272 3147 2211 106 0 0 chr18 5334993 5335310 -81342238 - AluSx SINE Alu 0 318 2 1852 148 31 0 chr18 5335729 5336020 -81341528 - AluJo SINE Alu -12 300 1 180 0 0 0 chr18 5336342 5336362 -81341186 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 2433 43 0 0 chr18 5336369 5336649 -81340899 - AluY SINE Alu -31 280 1 222 276 40 26 chr18 5337591 5337667 -81339881 + MIR3 SINE MIR 115 191 -17 821 147 0 33 chr18 5338604 5338754 -81338794 - FRAM SINE Alu 0 176 32 2407 27 0 0 chr18 5338754 5339046 -81338502 + L1PA6 LINE L1 5606 5897 -257 442 247 111 62 chr18 5339608 5339639 -81337909 + L1MC/D LINE L1 5359 5387 -1006 2541 72 0 0 chr18 5339639 5339943 -81337605 + AluSq SINE Alu 1 304 -9 2212 98 3 3 chr18 5339944 5340240 -81337308 + AluSc SINE Alu 1 296 -13 442 247 111 62 chr18 5340240 5340613 -81336935 + L1MC/D LINE L1 5386 5808 -585 181 140 0 40 chr18 5340786 5340836 -81336712 + (TAAAAA)n Simple_repeat Simple_repeat 6 53 0 199 282 188 43 chr18 5341030 5341147 -81336401 - L2 LINE L2 -2 3270 3137 2191 167 26 45 chr18 5342861 5343035 -81334513 - LTR32 LTR ERVL 0 471 295 2085 130 0 7 chr18 5343035 5343342 -81334206 - AluJb SINE Alu -7 305 1 2191 167 26 45 chr18 5343342 5343633 -81333915 - LTR32 LTR ERVL -176 295 15 896 259 58 66 chr18 5343635 5343734 -81333814 - L2 LINE L2 -4 3309 3211 1766 123 0 4 chr18 5343734 5343977 -81333571 + AluSg SINE Alu 45 286 -24 896 259 58 66 chr18 5343977 5344255 -81333293 - L2 LINE L2 -102 3211 2935 233 327 19 28 chr18 5344285 5344392 -81333156 + MIR SINE MIR 19 124 -84 3211 140 60 0 chr18 5344496 5345075 -81332473 + L1MA8 LINE L1 5506 6119 -172 395 186 82 0 chr18 5345364 5345461 -81332087 - L1MA6 LINE L1 0 6300 6196 203 305 85 43 chr18 5346348 5346447 -81331101 - MIR SINE MIR -6 256 148 2313 116 7 0 chr18 5346447 5346757 -81330791 - AluSx SINE Alu 0 312 1 203 305 85 43 chr18 5346757 5346798 -81330750 - MIR SINE MIR -114 148 110 318 320 120 20 chr18 5348387 5348490 -81329058 + MIR SINE MIR 28 152 -110 1035 154 95 27 chr18 5348490 5348711 -81328837 - MER46A DNA MER2_type 0 236 1 318 320 120 20 chr18 5348711 5348757 -81328791 + MIR SINE MIR 152 192 -70 266 338 12 0 chr18 5348858 5348938 -81328610 + L2 LINE L2 3220 3300 -13 550 245 83 16 chr18 5349296 5349488 -81328060 + MLT1I LTR MaLR 2 206 -203 25 31 0 0 chr18 5350101 5350133 -81327415 + AT_rich Low_complexity Low_complexity 1 32 0 574 340 11 11 chr18 5350706 5351053 -81326495 + L1ME LINE L1 5296 5642 -520 448 350 18 7 chr18 5351051 5351347 -81326201 + L1ME LINE L1 5413 5714 -456 * 212 0 36 0 chr18 5351544 5351572 -81325976 + (TG)n Simple_repeat Simple_repeat 2 30 0 1813 172 50 69 chr18 5352095 5352138 -81325410 - MSTA LTR MaLR 0 428 386 2246 122 0 3 chr18 5352138 5352450 -81325098 + AluSx SINE Alu 1 311 -1 1813 172 50 69 chr18 5352450 5352767 -81324781 - MSTA LTR MaLR -42 386 75 2984 165 40 83 chr18 5352767 5353489 -81324059 - LTR8 LTR ERV1 0 691 1 1813 172 50 69 chr18 5353489 5353563 -81323985 - MSTA LTR MaLR -353 75 1 253 228 35 0 chr18 5353590 5353647 -81323901 + L2 LINE L2 3214 3272 0 2244 117 119 12 chr18 5353699 5354126 -81323422 + MER4B LTR ERV1 3 475 -135 219 69 0 0 chr18 5354192 5354221 -81323327 + (TG)n Simple_repeat Simple_repeat 1 29 0 206 239 22 0 chr18 5355399 5355445 -81322103 - L2 LINE L2 0 3313 3267 714 249 24 20 chr18 5355516 5355765 -81321783 + LTR16A LTR ERVL 21 270 -180 377 234 72 18 chr18 5356673 5356784 -81320764 - L2 LINE L2 -4 3309 3193 521 294 80 22 chr18 5357058 5357289 -81320259 - MIR SINE MIR -6 256 16 21 0 0 0 chr18 5357768 5357789 -81319759 + AT_rich Low_complexity Low_complexity 1 21 0 340 281 33 0 chr18 5358657 5358778 -81318770 - MER117 DNA MER1_type -68 129 5 1616 145 14 0 chr18 5359336 5359625 -81317923 - L1MA4 LINE L1 -2 6298 6006 2033 67 4 8 chr18 5359697 5359952 -81317596 + AluSc SINE Alu 44 297 -12 746 244 21 77 chr18 5360593 5360827 -81316721 + MIR SINE MIR 18 238 -24 1707 121 73 35 chr18 5361033 5361322 -81316226 + AluJo SINE Alu 1 300 -12 290 214 13 24 chr18 5361420 5361516 -81316032 + MLT1J2 LTR MaLR 9 104 -343 1794 146 0 56 chr18 5362201 5362503 -81315045 - AluJb SINE Alu -27 285 1 315 350 55 79 chr18 5362586 5362838 -81314710 + L2 LINE L2 2932 3175 -97 2356 111 0 0 chr18 5362838 5363144 -81314404 - AluSx SINE Alu -6 306 1 315 350 55 79 chr18 5363144 5363234 -81314314 + L2 LINE L2 3175 3266 -6 624 169 15 39 chr18 5363458 5363588 -81313960 - AluJb SINE Alu -1 311 185 2244 63 11 11 chr18 5413812 5414127 -81263421 + AluY SINE Alu 1 315 0 21 0 0 0 chr18 5414679 5414700 -81262848 + AT_rich Low_complexity Low_complexity 1 21 0 340 211 158 46 chr18 5415206 5415358 -81262190 + MER104 DNA Tc2 6 174 -6 231 210 48 16 chr18 5415834 5415896 -81261652 - L1ME4a LINE L1 -91 6030 5967 22 35 0 0 chr18 5416238 5416267 -81261281 + AT_rich Low_complexity Low_complexity 1 29 0 44 46 0 0 chr18 5416444 5416509 -81261039 + AT_rich Low_complexity Low_complexity 1 65 0 306 348 8 8 chr18 5416509 5416627 -81260921 - L1M4 LINE L1 -1999 4147 4030 2575 196 52 3 chr18 5416905 5417478 -81260070 - L1P5 LINE L1 -876 5270 4670 2991 134 6 12 chr18 5417481 5417988 -81259560 + L1P5 LINE L1 5279 5782 -372 898 217 94 0 chr18 5418167 5418370 -81259178 + MER34 LTR ERV1 321 542 0 187 188 94 78 chr18 5419188 5419252 -81258296 - L2 LINE L2 -15 3257 3193 207 320 191 0 chr18 5419361 5419508 -81258040 - L2 LINE L2 -155 3117 2943 208 28 83 0 chr18 5419694 5419730 -81257818 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 1898 169 21 6 chr18 5422173 5422510 -81255038 - MER2 DNA MER2_type -2 342 1 370 241 9 206 chr18 5424562 5424907 -81252641 - L2 LINE L2 0 3272 2996 895 254 33 0 chr18 5425473 5425686 -81251862 - MER58A DNA MER1_type -4 220 1 258 352 0 0 chr18 5425940 5426028 -81251520 + L3 LINE CR1 1488 1575 -2 708 229 24 18 chr18 5426464 5426630 -81250918 + MIR SINE MIR 22 188 -74 289 220 51 4 chr18 5427054 5427140 -81250408 + MIR3 SINE MIR 94 156 -52 193 298 77 10 chr18 5427224 5427328 -81250220 - L2 LINE L2 -268 3045 2935 326 284 333 0 chr18 5427630 5427813 -81249735 + MIR SINE MIR 5 248 -14 249 269 20 74 chr18 5429251 5429400 -81248148 - L2 LINE L2 -842 2472 2332 14221 161 20 27 chr18 5429617 5429952 -81247596 - L1MA3 LINE L1 -237 7487 7151 1903 50 8 0 chr18 5429952 5430193 -81247355 - L1PA5 LINE L1 -4 6150 5908 14221 161 20 27 chr18 5430193 5430985 -81246563 - L1MA3 LINE L1 -573 7151 6355 3355 23 0 0 chr18 5430985 5431375 -81246173 - L1PA4 LINE L1 -6 6149 5760 14221 161 20 27 chr18 5431375 5435319 -81242229 - L1MA3 LINE L1 -1369 6355 2445 1480 229 61 13 chr18 5435319 5435695 -81241853 - Charlie1 DNA MER1_type -2364 397 4 3056 87 0 2 chr18 5435732 5436169 -81241379 - L1M1 LINE L1 -5110 2455 2020 11983 160 22 13 chr18 5436789 5438775 -81238773 - L1M1 LINE L1 -5548 2017 14 493 280 7 21 chr18 5440327 5440470 -81237078 - MIR SINE MIR -102 160 20 366 288 102 8 chr18 5440586 5440704 -81236844 - MIR3 SINE MIR -27 181 53 449 62 15 0 chr18 5441641 5441706 -81235842 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 452 159 45 23 chr18 5441953 5442041 -81235507 + MER5A DNA MER1_type 2 91 -98 1360 76 0 62 chr18 5442042 5442252 -81235296 + MER107 DNA MER1_type 1 197 0 2004 143 19 16 chr18 5443593 5443907 -81233641 + MER1B DNA MER1_type 1 315 -24 324 332 127 19 chr18 5443959 5444281 -81233267 + LTR16C LTR ERVL 135 491 0 1119 123 0 0 chr18 5444441 5444604 -81232944 - AluSg/x SINE Alu -2 310 148 1533 84 0 0 chr18 5444604 5444794 -81232754 - AluSq SINE Alu -123 190 1 1200 35 0 0 chr18 5445897 5446039 -81231509 + L1PA8 LINE L1 6020 6161 -11 273 364 0 39 chr18 5446443 5446572 -81230976 - MIR SINE MIR -64 144 21 319 353 17 35 chr18 5447238 5447411 -81230137 - MER5A DNA MER1_type -1 188 19 350 317 98 0 chr18 5447421 5447544 -81230004 - MIR3 SINE MIR -53 155 21 1569 121 12 40 chr18 5448141 5448389 -81229159 - AluJo SINE Alu -30 282 42 30 27 0 0 chr18 5448392 5448429 -81229119 + AT_rich Low_complexity Low_complexity 1 37 0 241 192 39 64 chr18 5448429 5448507 -81229041 + MLT1K LTR MaLR 513 588 0 297 306 32 0 chr18 5448680 5448808 -81228740 + MIR SINE MIR 6 142 -66 186 103 0 0 chr18 5448855 5448884 -81228664 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 747 313 111 21 chr18 5448891 5449316 -81228232 - L2 LINE L2 -7 3306 2844 1089 295 90 22 chr18 5449836 5450337 -81227211 - L2 LINE L2 -534 2780 2246 236 322 89 0 chr18 5450393 5450483 -81227065 + MIR SINE MIR 159 256 -6 201 351 60 33 chr18 5451099 5451250 -81226298 - MIR3 SINE MIR -40 168 14 3206 238 75 10 chr18 5451580 5452519 -81225029 + MER45B DNA AcHobo 4 1033 -7 191 59 0 59 chr18 5452761 5452795 -81224753 + (TTTAA)n Simple_repeat Simple_repeat 3 34 0 557 130 11 0 chr18 5452929 5453021 -81224527 + L1MA10 LINE L1 6242 6334 0 226 288 62 0 chr18 5453210 5453290 -81224258 + L2 LINE L2 2623 2707 -607 309 320 62 16 chr18 5453597 5453725 -81223823 + L2 LINE L2 3173 3306 -7 440 222 4 176 chr18 5454504 5454765 -81222783 - MIR SINE MIR -13 249 34 366 278 35 43 chr18 5454918 5455033 -81222515 - MIR SINE MIR -101 161 48 581 204 18 0 chr18 5455135 5455248 -81222300 - L1PA8A LINE L1 -1 6130 6016 2592 85 3 22 chr18 5455250 5455615 -81221933 - L1PA10 LINE L1 -117 6051 5694 334 359 50 22 chr18 5455848 5456029 -81221519 - MIR3 SINE MIR 0 208 23 543 203 51 8 chr18 5456090 5456208 -81221340 - L2 LINE L2 0 3313 3191 3274 227 67 36 chr18 5457953 5458459 -81219089 + L1MDb LINE L1 589 1078 -5328 2161 104 3 10 chr18 5458459 5458794 -81218754 + AluSx SINE Alu 1 312 0 3274 227 67 36 chr18 5458794 5459877 -81217671 + L1MDb LINE L1 1078 2267 -4139 * 3649 158 92 64 chr18 5459871 5459935 -81217613 + L1MB4 LINE L1 5218 5279 -901 1688 206 0 7 chr18 5459935 5460236 -81217312 + AluJo SINE Alu 1 299 -13 3649 158 92 64 chr18 5460236 5460503 -81217045 + L1MB4 LINE L1 5279 5537 -643 333 161 0 0 chr18 5460503 5460559 -81216989 + AluSg/x SINE Alu 165 220 -80 3649 158 92 64 chr18 5460559 5461115 -81216433 + L1MB4 LINE L1 5537 6177 -3 1283 228 75 47 chr18 5461118 5461792 -81215756 + L1MDb LINE L1 2254 2945 -3461 * 2174 265 27 13 chr18 5461789 5462503 -81215045 + L1M4 LINE L1 4273 4996 -1150 3139 167 23 49 chr18 5462510 5462814 -81214734 - L1MB4 LINE L1 -76 6104 5794 687 217 0 8 chr18 5462814 5462943 -81214605 - FLAM_A SINE Alu -5 128 1 3139 167 23 49 chr18 5462943 5463327 -81214221 - L1MB4 LINE L1 -386 5794 5434 326 172 0 49 chr18 5463332 5463414 -81214134 - L1MB4 LINE L1 -699 5467 5397 253 251 184 49 chr18 5463904 5464067 -81213481 + MIR SINE MIR 16 200 -62 797 271 57 27 chr18 5464174 5464473 -81213075 - L2 LINE L2 -716 2598 2291 263 322 133 7 chr18 5464604 5464747 -81212801 - L2 LINE L2 -797 2517 2357 189 0 0 0 chr18 5464767 5464788 -81212760 + (CTAAT)n Simple_repeat Simple_repeat 2 22 0 2082 83 0 95 chr18 5465316 5465652 -81211896 + AluSc SINE Alu 2 305 -4 2361 100 0 0 chr18 5468379 5468689 -81208859 - AluSg SINE Alu 0 310 1 210 71 0 0 chr18 5468689 5468717 -81208831 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 6309 106 18 10 chr18 5468723 5470240 -81207308 - L1PA8A LINE L1 -28 6103 4389 1342 267 59 91 chr18 5470758 5471388 -81206160 + MLT2E LTR ERVL 19 628 0 324 0 0 0 chr18 5471408 5471444 -81206104 + (CA)n Simple_repeat Simple_repeat 2 37 0 3317 118 4 2 chr18 5471505 5472006 -81205542 - L1PA15 LINE L1 -1 6164 5663 495 0 0 0 chr18 5472249 5472304 -81205244 + (CA)n Simple_repeat Simple_repeat 2 56 0 519 208 28 9 chr18 5472304 5472410 -81205138 - FLAM_A SINE Alu -24 118 11 184 299 0 69 chr18 5472541 5472628 -81204920 + L2 LINE L2 3189 3269 -3 426 189 326 8 chr18 5473527 5473659 -81203889 - MIR SINE MIR -13 249 76 249 256 21 27 chr18 5473875 5473988 -81203560 + MIR SINE MIR 70 182 -62 253 217 0 0 chr18 5474351 5474397 -81203151 - MER81 DNA DNA -1 113 68 400 209 29 43 chr18 5474635 5474774 -81202774 - L1MC4 LINE L1 -4 8038 7902 298 319 88 9 chr18 5476125 5476209 -81201339 - MER63 DNA MER1_type -311 751 675 3022 155 12 40 chr18 5476209 5476790 -81200758 + MER34B LTR ERV1 1 565 0 298 319 88 9 chr18 5476790 5476818 -81200730 - MER63 DNA MER1_type -387 675 4 188 386 79 0 chr18 5479039 5479153 -81198395 + L2 LINE L2 3114 3236 -36 316 182 30 30 chr18 5479207 5479306 -81198242 + LTR49-int LTR ERV1 3787 3885 -2446 6243 152 31 17 chr18 5479311 5481408 -81196140 - L1PA13 LINE L1 0 6163 4041 24 0 0 0 chr18 5481736 5481760 -81195788 + AT_rich Low_complexity Low_complexity 1 24 0 2128 134 3 3 chr18 5481763 5482070 -81195478 + AluSx SINE Alu 1 307 -5 3659 82 12 6 chr18 5482355 5482857 -81194691 - L1PA8 LINE L1 -7 6165 5661 21 0 0 0 chr18 5483015 5483036 -81194512 + AT_rich Low_complexity Low_complexity 1 21 0 1446 235 47 2 chr18 5483494 5483919 -81193629 + L1MC2 LINE L1 4458 4901 -1245 3910 182 59 14 chr18 5483960 5484756 -81192792 + L1MC2 LINE L1 5512 6343 -1 424 339 44 0 chr18 5485508 5485688 -81191860 + L2 LINE L2 2565 2752 -562 261 329 139 35 chr18 5485703 5486019 -81191529 + L2 LINE L2 2964 3312 -1 232 255 294 20 chr18 5486705 5486858 -81190690 - L2 LINE L2 -312 3001 2807 1398 148 22 82 chr18 5488036 5488353 -81189195 - L1PA16 LINE L1 -9 6157 5860 1246 167 33 18 chr18 5488837 5489113 -81188435 - L1MA7 LINE L1 -3 6288 6009 2302 104 0 3 chr18 5489592 5489900 -81187648 - AluSp SINE Alu -6 307 1 218 351 33 82 chr18 5490128 5490373 -81187175 - L2 LINE L2 -1 3271 3039 233 211 0 0 chr18 5490907 5490938 -81186610 + A-rich Low_complexity Low_complexity 1 34 -18 2268 104 3 16 chr18 5490938 5491255 -81186293 + AluSq SINE Alu 1 313 0 233 211 0 0 chr18 5491255 5491275 -81186273 + A-rich Low_complexity Low_complexity 33 52 0 1242 144 85 4 chr18 5491800 5492036 -81185512 + L1PB3 LINE L1 5898 6152 -2 1810 94 8 4 chr18 5492236 5492481 -81185067 - AluSq SINE Alu -67 246 1 2081 87 42 3 chr18 5492858 5493147 -81184401 + AluSq SINE Alu 1 300 -13 391 293 30 107 chr18 5493533 5493796 -81183752 - L2 LINE L2 -15 3257 3015 251 222 0 0 chr18 5495302 5495347 -81182201 - MER3 DNA MER1_type 0 209 165 823 247 0 0 chr18 5495349 5495519 -81182029 - FRAM SINE Alu -6 170 1 664 188 58 13 chr18 5495520 5495674 -81181874 - MER3 DNA MER1_type -48 161 1 298 327 105 16 chr18 5496735 5496966 -81180582 - L2 LINE L2 -1577 1737 1481 2366 111 27 16 chr18 5496966 5497337 -81180211 - THE1C LTR MaLR 0 375 1 298 327 105 16 chr18 5497337 5497353 -81180195 - L2 LINE L2 -1833 1481 1468 365 204 0 11 chr18 5498571 5498664 -81178884 + GA-rich Low_complexity Low_complexity 2 93 0 300 296 0 0 chr18 5499621 5499692 -81177856 - L2 LINE L2 -39 3233 3163 256 358 47 55 chr18 5499907 5500164 -81177384 + L2 LINE L2 3018 3272 0 204 294 153 12 chr18 5500603 5500688 -81176860 - MER5A DNA MER1_type -57 132 36 400 194 167 19 chr18 5500703 5500811 -81176737 - MIR3 SINE MIR -46 162 39 366 343 88 5 chr18 5501105 5501321 -81176227 + L3b LINE CR1 1226 1459 -124 1505 116 158 23 chr18 5502250 5502509 -81175039 + AluSx SINE Alu 5 298 -14 217 245 19 0 chr18 5502509 5502562 -81174986 + MIR SINE MIR 144 197 -65 282 340 158 34 chr18 5503064 5503761 -81173787 - L2 LINE L2 -528 2786 2004 303 294 37 55 chr18 5504261 5504424 -81173124 - L2 LINE L2 -4 3268 3109 26 50 0 0 chr18 5505063 5505103 -81172445 + AT_rich Low_complexity Low_complexity 1 40 0 2653 80 16 13 chr18 5505872 5506246 -81171302 - THE1C LTR MaLR 0 375 1 4322 203 49 42 chr18 5506576 5508170 -81169378 - L1MC2 LINE L1 -8 6336 4742 5365 150 37 23 chr18 5508186 5508678 -81168870 - L1MA7 LINE L1 -6 6285 5801 291 54 0 0 chr18 5508678 5508715 -81168833 + (CA)n Simple_repeat Simple_repeat 2 38 0 5365 150 37 23 chr18 5508715 5510107 -81167441 - L1MA7 LINE L1 -490 5801 4369 567 361 86 30 chr18 5510150 5510691 -81166857 + L2 LINE L2 1003 1599 -1715 1765 190 54 3 chr18 5510691 5511022 -81166526 + MER7A DNA MER2_type 1 346 0 567 361 86 30 chr18 5511022 5511234 -81166314 + L2 LINE L2 1599 1798 -1516 23 0 0 0 chr18 5511243 5511266 -81166282 + AT_rich Low_complexity Low_complexity 1 23 0 619 369 12 12 chr18 5511280 5511611 -81165937 + MLT1I LTR MaLR 79 409 0 739 333 53 48 chr18 5511636 5512159 -81165389 + L2 LINE L2 1859 2384 -930 464 296 47 33 chr18 5512379 5512680 -81164868 + L1MDa LINE L1 1791 2095 -4445 508 252 0 25 chr18 5512833 5512952 -81164596 + FLAM_A SINE Alu 1 116 -17 189 0 0 0 chr18 5512957 5512978 -81164570 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 26 30 0 0 chr18 5513069 5513102 -81164446 + AT_rich Low_complexity Low_complexity 1 33 0 16736 156 29 23 chr18 5513867 5520784 -81156764 + L1MA3 LINE L1 766 7724 0 478 298 89 62 chr18 5521159 5521451 -81156097 + LTR33 LTR ERVL 15 314 -207 653 275 98 4 chr18 5522601 5522845 -81154703 - MLT1F LTR MaLR -271 271 5 2262 223 32 16 chr18 5522891 5523456 -81154092 - L1MD3 LINE L1 -9 7986 7413 618 222 15 1 chr18 5523456 5523588 -81153960 - MLT1F1 LTR MaLR -442 125 1 205 204 0 23 chr18 5524800 5524844 -81152704 + CT-rich Low_complexity Low_complexity 3 45 0 2464 90 0 0 chr18 5525582 5525894 -81151654 - AluSx SINE Alu 0 312 1 828 254 30 13 chr18 5525920 5526156 -81151392 + MIR SINE MIR 23 262 0 251 263 61 18 chr18 5527409 5527523 -81150025 + LTR67 LTR ERVL 410 528 -29 895 181 0 0 chr18 5527866 5528010 -81149538 - MER46A DNA MER2_type -92 144 1 211 250 190 26 chr18 5528019 5528135 -81149413 + MIR SINE MIR 91 225 -37 266 347 21 79 chr18 5528668 5528858 -81148690 + MER5A DNA MER1_type 8 186 -3 227 319 14 0 chr18 5528911 5528983 -81148565 + MER91 DNA MER1_type 3 75 -65 21 0 0 0 chr18 5530074 5530095 -81147453 + AT_rich Low_complexity Low_complexity 1 21 0 275 273 0 0 chr18 5531036 5531102 -81146446 + MER5A DNA MER1_type 101 166 -23 680 220 15 0 chr18 5531109 5531241 -81146307 - MER5A DNA MER1_type -45 144 11 518 125 10 0 chr18 5531753 5531849 -81145699 - L1MA8 LINE L1 -1 6290 6194 263 281 122 22 chr18 5533026 5533165 -81144383 + MIR SINE MIR 90 242 -20 202 326 42 32 chr18 5534526 5534621 -81142927 + MIR SINE MIR 87 182 -80 376 184 13 0 chr18 5534869 5534945 -81142603 - MER116 DNA Mariner -2 78 2 267 173 0 0 chr18 5536948 5537000 -81140548 + GA-rich Low_complexity Low_complexity 3 54 0 899 263 16 20 chr18 5537063 5537310 -81140238 - MIR SINE MIR -15 247 2 2208 99 0 3 chr18 5537363 5537655 -81139893 + AluSx SINE Alu 1 291 -21 281 137 123 14 chr18 5538479 5538552 -81138996 + L2 LINE L2 2261 2341 -973 802 286 89 23 chr18 5538559 5539182 -81138366 + L2 LINE L2 2644 3313 0 180 0 0 0 chr18 5539317 5539337 -81138211 + (A)n Simple_repeat Simple_repeat 1 20 0 1724 178 0 3 chr18 5539454 5539747 -81137801 - AluJo SINE Alu -10 302 11 212 158 0 0 chr18 5541030 5541068 -81136480 + GA-rich Low_complexity Low_complexity 1 38 0 299 272 19 19 chr18 5541152 5541255 -81136293 - MIR3 SINE MIR -10 198 96 22 0 0 0 chr18 5543270 5543292 -81134256 + AT_rich Low_complexity Low_complexity 1 22 0 1964 151 3 0 chr18 5543293 5543577 -81133971 - AluSx SINE Alu -26 286 2 180 308 51 51 chr18 5544174 5544291 -81133257 - MIR3 SINE MIR -24 184 68 201 182 0 0 chr18 5545337 5545392 -81132156 + (TA)n Simple_repeat Simple_repeat 2 56 0 1046 190 0 69 chr18 5546051 5546267 -81131281 + AluJo SINE Alu 81 281 -31 23 33 0 0 chr18 5546267 5546297 -81131251 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr18 5546517 5546552 -81130996 + AT_rich Low_complexity Low_complexity 1 35 0 2346 113 0 0 chr18 5547483 5547793 -81129755 - AluSx SINE Alu -2 310 1 360 0 0 0 chr18 5547842 5547882 -81129666 + (TG)n Simple_repeat Simple_repeat 1 40 0 1464 142 67 28 chr18 5547961 5548214 -81129334 - AluJo SINE Alu -49 263 1 26 0 0 0 chr18 5548474 5548500 -81129048 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr18 5549596 5549640 -81127908 + AT_rich Low_complexity Low_complexity 1 44 0 595 289 94 43 chr18 5550094 5550350 -81127198 - MER93a LTR ERV1 -71 331 63 426 348 108 37 chr18 5550579 5551116 -81126432 + L3 LINE CR1 676 1250 -327 272 341 136 17 chr18 5551773 5551949 -81125599 + L3 LINE CR1 1372 1568 -9 715 276 37 12 chr18 5552536 5552782 -81124766 + MIR SINE MIR 2 253 -9 2152 111 0 3 chr18 5552787 5553102 -81124446 - AluSc SINE Alu 0 314 1 32 26 0 0 chr18 5553308 5553347 -81124201 + AT_rich Low_complexity Low_complexity 1 39 0 451 98 12 12 chr18 5554974 5555035 -81122513 + (TTCC)n Simple_repeat Simple_repeat 3 66 -18 2166 109 7 3 chr18 5555035 5555339 -81122209 - AluY SINE Alu -6 305 1 451 98 12 12 chr18 5555339 5555359 -81122189 + (TTCC)n Simple_repeat Simple_repeat 65 84 0 798 113 22 49 chr18 5555395 5555580 -81121968 + CT-rich Low_complexity Low_complexity 1 180 0 1503 196 7 0 chr18 5555586 5555862 -81121686 - AluJb SINE Alu -34 278 1 305 339 145 5 chr18 5557371 5557441 -81120107 - L3 LINE CR1 -19 1558 1499 1894 214 102 39 chr18 5557441 5557951 -81119597 - MLT1F LTR MaLR 0 542 1 305 339 145 5 chr18 5557951 5558066 -81119482 - L3 LINE CR1 -78 1499 1347 258 32 0 0 chr18 5559199 5559230 -81118318 + (TA)n Simple_repeat Simple_repeat 2 32 0 2481 60 0 3 chr18 5559230 5559531 -81118017 - AluY SINE Alu -11 300 1 538 252 7 52 chr18 5561002 5561157 -81116391 - MER5B DNA MER1_type -6 172 25 1574 198 80 46 chr18 5562605 5563044 -81114504 + MLT1C LTR MaLR 14 467 0 1494 193 31 0 chr18 5563354 5563608 -81113940 - AluJo SINE Alu -46 266 5 241 229 0 0 chr18 5563612 5563660 -81113888 - L1 LINE L1 -1153 4993 4946 1992 250 15 14 chr18 5563662 5564323 -81113225 - L1 LINE L1 -2771 3375 2714 903 260 62 87 chr18 5565049 5565553 -81111995 + L2 LINE L2 2812 3302 -11 320 260 75 75 chr18 5565528 5565728 -81111820 - L2 LINE L2 -2 3311 3112 * 2097 142 0 0 chr18 5566230 5566533 -81111015 + AluSx SINE Alu 1 303 -9 27 0 0 0 chr18 5567434 5567461 -81110087 + AT_rich Low_complexity Low_complexity 1 27 0 2080 148 23 0 chr18 5568173 5568524 -81109024 - L1PB4 LINE L1 -5 6151 5793 249 83 0 0 chr18 5568524 5568560 -81108988 + (TG)n Simple_repeat Simple_repeat 2 37 0 180 219 0 0 chr18 5568573 5568614 -81108934 + (TATATG)n Simple_repeat Simple_repeat 1 41 0 1008 128 32 0 chr18 5568639 5568795 -81108753 - L1PB4 LINE L1 -376 5780 5620 281 272 143 30 chr18 5568983 5569120 -81108428 + MIR SINE MIR 17 166 -86 416 244 35 26 chr18 5570153 5570268 -81107280 - L2 LINE L2 0 3313 3198 306 212 15 15 chr18 5570273 5570339 -81107209 - MIR SINE MIR -126 136 71 188 345 0 0 chr18 5570370 5570425 -81107123 - MIR SINE MIR -121 87 33 2011 126 0 10 chr18 5571151 5571444 -81106104 + AluSq SINE Alu 1 290 -23 217 265 24 12 chr18 5571662 5571745 -81105803 + (CATATA)n Simple_repeat Simple_repeat 2 85 0 2472 75 0 3 chr18 5571965 5572272 -81105276 + AluY SINE Alu 1 306 -5 805 321 78 45 chr18 5572843 5573291 -81104257 + L3 LINE CR1 838 1300 -277 728 161 21 114 chr18 5573908 5574101 -81103447 + FAM SINE Alu 1 175 0 583 329 34 10 chr18 5574633 5574840 -81102708 + L3 LINE CR1 920 1131 -446 2816 119 21 12 chr18 5575396 5575826 -81101722 - MER57B LTR ERV1 0 434 1 319 285 161 53 chr18 5576515 5576876 -81100672 - L2 LINE L2 -2 3311 2912 4861 50 125 0 chr18 5577081 5577744 -81099804 + L1PA8 LINE L1 5425 6170 -2 37 23 0 0 chr18 5577744 5577788 -81099760 + AT_rich Low_complexity Low_complexity 1 44 0 1205 14 0 0 chr18 5577949 5578087 -81099461 - L1PA2 LINE L1 -4 6151 6014 24 32 0 0 chr18 5579595 5579626 -81097922 + AT_rich Low_complexity Low_complexity 1 31 0 213 39 0 0 chr18 5581428 5581454 -81096094 + (CATA)n Simple_repeat Simple_repeat 2 27 0 209 279 0 47 chr18 5584166 5584252 -81093296 + L2 LINE L2 2997 3078 -194 4343 158 67 3 chr18 5584299 5585075 -81092473 - LTR1B LTR ERV1 0 826 1 647 308 20 5 chr18 5585517 5585715 -81091833 + MIR SINE MIR 61 261 -1 237 237 0 17 chr18 5585815 5585874 -81091674 - MIR SINE MIR -4 258 201 186 171 0 0 chr18 5586180 5586221 -81091327 + (CA)n Simple_repeat Simple_repeat 2 42 0 290 238 95 40 chr18 5587013 5587139 -81090409 - MIR SINE MIR -74 188 56 253 196 0 20 chr18 5587475 5587526 -81090022 + LTR40a LTR ERVL 90 139 -380 240 100 0 0 chr18 5587630 5587670 -81089878 + (TC)n Simple_repeat Simple_repeat 2 41 0 728 287 31 28 chr18 5587690 5587976 -81089572 + LTR40a LTR ERVL 203 489 -30 1306 189 0 13 chr18 5587981 5588209 -81089339 + MER8 DNA MER2_type 15 239 0 664 224 36 82 chr18 5588244 5588297 -81089251 + MER5A DNA MER1_type 1 55 -134 3062 30 5 0 chr18 5588297 5588666 -81088882 + L1PA2 LINE L1 5784 6154 -1 664 224 36 82 chr18 5588666 5588682 -81088866 + MER5A DNA MER1_type 55 70 -119 2464 80 0 0 chr18 5588682 5588993 -81088555 + AluY SINE Alu 1 311 0 664 224 36 82 chr18 5588993 5589118 -81088430 + MER5A DNA MER1_type 70 187 -2 21 0 0 0 chr18 5590851 5590872 -81086676 + AT_rich Low_complexity Low_complexity 1 21 0 5389 155 17 60 chr18 5590872 5592873 -81084675 - L1MA7 LINE L1 -1 6290 4377 386 185 185 8 chr18 5592911 5593030 -81084518 + L2 LINE L2 3174 3313 0 866 175 11 0 chr18 5594022 5594211 -81083337 + L1MB3 LINE L1 5993 6183 0 2413 81 0 0 chr18 5594531 5594828 -81082720 + AluSq SINE Alu 1 297 -16 2341 99 3 0 chr18 5595135 5595447 -81082101 + AluSq SINE Alu 1 313 0 359 338 40 35 chr18 5595484 5595685 -81081863 - MIR SINE MIR -55 207 6 453 50 0 0 chr18 5595888 5595948 -81081600 + (CA)n Simple_repeat Simple_repeat 2 61 0 231 36 0 0 chr18 5595964 5595992 -81081556 + (GA)n Simple_repeat Simple_repeat 1 28 0 333 0 0 0 chr18 5596294 5596309 -81081239 + (TG)n Simple_repeat Simple_repeat 1 52 0 333 0 0 0 chr18 5596309 5596346 -81081202 + (TG)n Simple_repeat Simple_repeat 1 37 0 336 311 117 11 chr18 5597339 5597519 -81080029 - MIR SINE MIR -4 258 60 2237 115 3 0 chr18 5597592 5597897 -81079651 - AluSx SINE Alu -6 306 1 367 331 57 26 chr18 5597897 5598132 -81079416 - MIR SINE MIR -20 242 3 339 250 0 0 chr18 5599631 5599703 -81077845 + MIR SINE MIR 85 156 -106 237 319 50 142 chr18 5600311 5600593 -81076955 + L2 LINE L2 2995 3250 -22 2373 73 0 0 chr18 5601612 5601898 -81075650 - AluSx SINE Alu -26 286 1 968 141 0 0 chr18 5601898 5602033 -81075515 - AluSq/x SINE Alu -177 135 1 296 179 0 36 chr18 5602265 5602321 -81075227 + Tigger5 DNA MER2_type 1 54 -2269 * 348 200 0 27 chr18 5602289 5602364 -81075184 + Tigger5 DNA MER2_type 2251 2323 0 358 225 56 0 chr18 5602405 5602494 -81075054 + Tigger5 DNA MER2_type 2230 2323 0 491 243 80 88 chr18 5602973 5603335 -81074213 - L2 LINE L2 0 3313 2955 289 341 72 47 chr18 5604299 5604575 -81072973 + L2 LINE L2 3015 3297 -16 511 259 148 32 chr18 5604961 5605177 -81072371 + MIR SINE MIR 22 262 0 275 245 0 0 chr18 5605720 5605773 -81071775 + L2 LINE L2 3258 3310 -3 1671 134 113 7 chr18 5607722 5607997 -81069551 - AluSc SINE Alu -5 304 1 208 224 0 52 chr18 5608610 5608668 -81068880 + MIR3 SINE MIR 120 174 -34 1418 150 7 17 chr18 5608743 5609030 -81068518 + L1MA8 LINE L1 6008 6291 0 195 114 0 0 chr18 5609443 5609478 -81068070 + (GA)n Simple_repeat Simple_repeat 1 35 0 24 0 0 0 chr18 5611293 5611317 -81066231 + AT_rich Low_complexity Low_complexity 1 24 0 1038 174 47 80 chr18 5611869 5612208 -81065340 + MER4-int LTR ERV1 3354 3681 -2917 * 3616 133 84 15 chr18 5612207 5612882 -81064666 + MER4-int LTR ERV1 3837 4558 -2040 1764 37 56 0 chr18 5612882 5613097 -81064451 + AluY SINE Alu 1 227 -84 23094 38 1 7 chr18 5613197 5616094 -81061454 - L1P LINE L1 -2223 3923 1044 22 0 0 0 chr18 5616532 5616554 -81060994 + AT_rich Low_complexity Low_complexity 1 22 0 962 265 103 23 chr18 5616737 5617448 -81060100 - L1ME3 LINE L1 -221 5945 5165 234 0 0 0 chr18 5617696 5617722 -81059826 + (CTG)n Simple_repeat Simple_repeat 2 27 0 223 312 54 21 chr18 5618272 5618365 -81059183 + L2 LINE L2 2995 3090 -182 2676 19 0 0 chr18 5618553 5618863 -81058685 + L1PA2 LINE L1 5844 6153 -2 479 295 57 57 chr18 5619179 5619389 -81058159 + MIR SINE MIR 43 252 -10 522 238 12 108 chr18 5621175 5621415 -81056133 - L2 LINE L2 0 3313 3097 2179 110 0 26 chr18 5621864 5622174 -81055374 + AluSg SINE Alu 1 302 -8 2485 65 0 7 chr18 5624017 5624325 -81053223 - AluY SINE Alu -5 306 1 521 342 106 33 chr18 5625908 5626209 -81051339 - L2 LINE L2 0 3272 2950 22 0 0 0 chr18 5629971 5629993 -81047555 + AT_rich Low_complexity Low_complexity 1 22 0 1964 151 3 0 chr18 5629994 5630278 -81047270 - AluSx SINE Alu -26 286 2 180 308 51 51 chr18 5630875 5630992 -81046556 - MIR3 SINE MIR -24 184 68 201 182 0 0 chr18 5632038 5632093 -81045455 + (TA)n Simple_repeat Simple_repeat 2 56 0 1046 190 0 69 chr18 5632752 5632968 -81044580 + AluJo SINE Alu 81 281 -31 23 33 0 0 chr18 5632968 5632998 -81044550 + AT_rich Low_complexity Low_complexity 1 30 0 21 57 0 0 chr18 5633218 5633253 -81044295 + AT_rich Low_complexity Low_complexity 1 35 0 2362 110 0 0 chr18 5634184 5634494 -81043054 - AluSx SINE Alu -2 310 1 342 0 0 0 chr18 5634543 5634581 -81042967 + (TG)n Simple_repeat Simple_repeat 1 38 0 1464 142 67 28 chr18 5634660 5634913 -81042635 - AluJo SINE Alu -49 263 1 26 0 0 0 chr18 5635173 5635199 -81042349 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr18 5636295 5636339 -81041209 + AT_rich Low_complexity Low_complexity 1 44 0 595 289 94 43 chr18 5636793 5637049 -81040499 - MER93a LTR ERV1 -71 331 63 426 348 108 37 chr18 5637278 5637815 -81039733 + L3 LINE CR1 676 1250 -327 272 341 136 17 chr18 5638472 5638648 -81038900 + L3 LINE CR1 1372 1568 -9 715 276 37 12 chr18 5639235 5639481 -81038067 + MIR SINE MIR 2 253 -9 2152 111 0 3 chr18 5639486 5639801 -81037747 - AluSc SINE Alu 0 314 1 32 26 0 0 chr18 5640007 5640046 -81037502 + AT_rich Low_complexity Low_complexity 1 39 0 451 98 12 12 chr18 5641673 5641734 -81035814 + (TTCC)n Simple_repeat Simple_repeat 3 66 -18 2166 109 7 3 chr18 5641734 5642038 -81035510 - AluY SINE Alu -6 305 1 451 98 12 12 chr18 5642038 5642058 -81035490 + (TTCC)n Simple_repeat Simple_repeat 65 84 0 789 111 33 39 chr18 5642094 5642275 -81035273 + CT-rich Low_complexity Low_complexity 1 180 0 1503 196 7 0 chr18 5642281 5642557 -81034991 - AluJb SINE Alu -34 278 1 305 339 145 5 chr18 5644066 5644136 -81033412 - L3 LINE CR1 -19 1558 1499 1894 214 102 39 chr18 5644136 5644646 -81032902 - MLT1F LTR MaLR 0 542 1 305 339 145 5 chr18 5644646 5644761 -81032787 - L3 LINE CR1 -78 1499 1347 258 32 0 0 chr18 5645894 5645925 -81031623 + (TA)n Simple_repeat Simple_repeat 2 32 0 2501 47 0 3 chr18 5645925 5646223 -81031325 - AluY SINE Alu -14 297 1 526 258 7 52 chr18 5647694 5647849 -81029699 - MER5B DNA MER1_type -6 172 25 1556 201 80 46 chr18 5649297 5649736 -81027812 + MLT1C LTR MaLR 14 467 0 1494 193 31 0 chr18 5650046 5650300 -81027248 - AluJo SINE Alu -46 266 5 241 229 0 0 chr18 5650304 5650352 -81027196 - L1 LINE L1 -1153 4993 4946 1988 242 18 17 chr18 5650354 5651015 -81026533 - L1 LINE L1 -2771 3375 2714 920 255 61 91 chr18 5651741 5652247 -81025301 + L2 LINE L2 2812 3302 -11 320 260 75 75 chr18 5652222 5652422 -81025126 - L2 LINE L2 -2 3311 3112 * 2097 142 0 0 chr18 5652924 5653227 -81024321 + AluSx SINE Alu 1 303 -9 27 0 0 0 chr18 5654128 5654155 -81023393 + AT_rich Low_complexity Low_complexity 1 27 0 2080 148 23 0 chr18 5654867 5655218 -81022330 - L1PB4 LINE L1 -5 6151 5793 249 83 0 0 chr18 5655218 5655254 -81022294 + (TG)n Simple_repeat Simple_repeat 2 37 0 180 219 0 0 chr18 5655267 5655308 -81022240 + (TATATG)n Simple_repeat Simple_repeat 1 41 0 964 163 29 6 chr18 5655311 5655483 -81022065 - L1PB4 LINE L1 -361 5795 5620 281 272 143 30 chr18 5655671 5655808 -81021740 + MIR SINE MIR 17 166 -86 416 244 35 26 chr18 5656841 5656956 -81020592 - L2 LINE L2 0 3313 3198 306 212 15 15 chr18 5656961 5657027 -81020521 - MIR SINE MIR -126 136 71 188 345 0 0 chr18 5657058 5657113 -81020435 - MIR SINE MIR -121 87 33 2024 126 0 10 chr18 5657839 5658132 -81019416 + AluSq SINE Alu 1 290 -23 217 265 24 12 chr18 5658350 5658433 -81019115 + (CATATA)n Simple_repeat Simple_repeat 2 85 0 2515 75 0 0 chr18 5658653 5658960 -81018588 + AluY SINE Alu 1 307 -4 800 330 76 42 chr18 5659531 5659979 -81017569 + L3 LINE CR1 838 1300 -277 717 181 16 109 chr18 5660596 5660789 -81016759 + FAM SINE Alu 1 175 0 583 329 34 10 chr18 5661322 5661529 -81016019 + L3 LINE CR1 920 1131 -446 2792 121 21 12 chr18 5662088 5662518 -81015030 - MER57B LTR ERV1 0 434 1 319 285 161 53 chr18 5663207 5663568 -81013980 - L2 LINE L2 -2 3311 2912 4886 48 125 0 chr18 5663773 5664436 -81013112 + L1PA8 LINE L1 5425 6170 -2 37 23 0 0 chr18 5664436 5664480 -81013068 + AT_rich Low_complexity Low_complexity 1 44 0 1231 14 0 0 chr18 5664641 5664783 -81012765 - L1PA2 LINE L1 0 6155 6014 24 32 0 0 chr18 5666291 5666322 -81011226 + AT_rich Low_complexity Low_complexity 1 31 0 213 39 0 0 chr18 5668124 5668150 -81009398 + (CATA)n Simple_repeat Simple_repeat 2 27 0 209 279 0 47 chr18 5670862 5670948 -81006600 + L2 LINE L2 2997 3078 -194 4343 158 67 3 chr18 5670995 5671771 -81005777 - LTR1B LTR ERV1 0 826 1 647 308 20 5 chr18 5672213 5672411 -81005137 + MIR SINE MIR 61 261 -1 237 237 0 17 chr18 5672511 5672570 -81004978 - MIR SINE MIR -4 258 201 186 171 0 0 chr18 5672874 5672915 -81004633 + (CA)n Simple_repeat Simple_repeat 2 42 0 290 238 95 40 chr18 5673707 5673833 -81003715 - MIR SINE MIR -74 188 56 253 196 0 20 chr18 5674169 5674220 -81003328 + LTR40a LTR ERVL 90 139 -380 240 100 0 0 chr18 5674324 5674364 -81003184 + (TC)n Simple_repeat Simple_repeat 2 41 0 748 283 31 28 chr18 5674384 5674670 -81002878 + LTR40a LTR ERVL 203 489 -30 1306 189 0 13 chr18 5674675 5674903 -81002645 + MER8 DNA MER2_type 15 239 0 667 213 35 86 chr18 5674938 5674991 -81002557 + MER5A DNA MER1_type 1 55 -134 3047 35 0 3 chr18 5674991 5675360 -81002188 + L1PA2 LINE L1 5784 6151 -4 667 213 35 86 chr18 5675360 5675376 -81002172 + MER5A DNA MER1_type 55 70 -119 2473 77 0 0 chr18 5675376 5675687 -81001861 + AluY SINE Alu 1 311 0 667 213 35 86 chr18 5675687 5675813 -81001735 + MER5A DNA MER1_type 70 187 -2 21 0 0 0 chr18 5677546 5677567 -80999981 + AT_rich Low_complexity Low_complexity 1 21 0 5389 155 17 60 chr18 5677567 5679568 -80997980 - L1MA7 LINE L1 -1 6290 4377 386 185 185 8 chr18 5679606 5679725 -80997823 + L2 LINE L2 3174 3313 0 884 175 11 0 chr18 5680717 5680906 -80996642 + L1MB3 LINE L1 5993 6183 0 2389 84 0 0 chr18 5681226 5681524 -80996024 + AluSq SINE Alu 1 298 -15 2298 97 7 0 chr18 5681830 5682140 -80995408 + AluSq SINE Alu 1 312 -1 359 338 40 35 chr18 5682177 5682378 -80995170 - MIR SINE MIR -55 207 6 345 62 0 0 chr18 5682582 5682630 -80994918 + (CA)n Simple_repeat Simple_repeat 2 49 0 231 36 0 0 chr18 5682646 5682674 -80994874 + (GA)n Simple_repeat Simple_repeat 1 28 0 330 283 9 19 chr18 5682976 5682991 -80994557 + GA-rich Low_complexity Low_complexity 4 18 -90 297 0 0 0 chr18 5682991 5683024 -80994524 + (TG)n Simple_repeat Simple_repeat 1 33 0 330 283 9 19 chr18 5683024 5683114 -80994434 + GA-rich Low_complexity Low_complexity 18 108 0 336 308 116 15 chr18 5684017 5684215 -80993333 - MIR SINE MIR -4 258 41 2311 105 3 0 chr18 5684270 5684574 -80992974 - AluSx SINE Alu -7 305 1 345 333 57 26 chr18 5684574 5684809 -80992739 - MIR SINE MIR -20 242 3 339 250 0 0 chr18 5686308 5686380 -80991168 + MIR SINE MIR 85 156 -106 230 312 60 153 chr18 5686988 5687270 -80990278 + L2 LINE L2 2995 3250 -22 2373 73 0 0 chr18 5688289 5688575 -80988973 - AluSx SINE Alu -26 286 1 968 141 0 0 chr18 5688575 5688710 -80988838 - AluSq/x SINE Alu -177 135 1 296 179 0 36 chr18 5688942 5688998 -80988550 + Tigger5 DNA MER2_type 1 54 -2269 * 348 200 0 27 chr18 5688966 5689041 -80988507 + Tigger5 DNA MER2_type 2251 2323 0 358 225 56 0 chr18 5689082 5689171 -80988377 + Tigger5 DNA MER2_type 2230 2323 0 491 243 80 88 chr18 5689650 5690012 -80987536 - L2 LINE L2 0 3313 2955 289 341 72 47 chr18 5690976 5691252 -80986296 + L2 LINE L2 3015 3297 -16 511 259 148 32 chr18 5691638 5691854 -80985694 + MIR SINE MIR 22 262 0 275 245 0 0 chr18 5692397 5692450 -80985098 + L2 LINE L2 3258 3310 -3 1671 134 113 7 chr18 5694399 5694674 -80982874 - AluSc SINE Alu -5 304 1 208 224 0 52 chr18 5695287 5695345 -80982203 + MIR3 SINE MIR 120 174 -34 1421 156 3 17 chr18 5695420 5695708 -80981840 + L1MA8 LINE L1 6008 6291 0 27 49 0 0 chr18 5696914 5696955 -80980593 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr18 5697277 5697306 -80980242 + (CA)n Simple_repeat Simple_repeat 2 30 0 3049 191 29 40 chr18 5698396 5698456 -80979092 + L1MA7 LINE L1 4688 4747 -1544 1914 143 3 10 chr18 5698456 5698770 -80978778 + AluSx SINE Alu 1 312 0 3049 191 29 40 chr18 5698770 5699220 -80978328 + L1MA7 LINE L1 4747 5200 -1091 2007 90 49 3 chr18 5699220 5699508 -80978040 + AluY SINE Alu 1 301 -10 3049 191 29 40 chr18 5699508 5700114 -80977434 + L1MA7 LINE L1 5200 5786 -505 11353 190 39 9 chr18 5700116 5703463 -80974085 + L1PA15 LINE L1 2706 6144 -21 1685 154 22 36 chr18 5703463 5703818 -80973730 + L1MA7 LINE L1 5939 6291 0 11353 190 39 9 chr18 5703818 5703835 -80973713 + L1PA15 LINE L1 6144 6159 -6 595 279 52 0 chr18 5704138 5704310 -80973238 - L1ME1 LINE L1 -106 6060 5880 244 295 0 0 chr18 5704314 5704375 -80973173 + MER34C LTR ERV1 41 101 -484 317 180 118 101 chr18 5704594 5704772 -80972776 + MER34B LTR ERV1 385 565 0 2430 244 72 26 chr18 5704773 5706285 -80971263 - L1ME1 LINE L1 -284 5882 4303 * 3772 256 48 14 chr18 5706261 5707667 -80969881 - L1ME1 LINE L1 -2424 3722 2269 478 353 141 8 chr18 5707774 5708242 -80969306 + L2 LINE L2 2436 2965 -349 519 307 14 21 chr18 5708319 5708459 -80969089 - L2 LINE L2 0 3272 3134 681 248 133 63 chr18 5709518 5709901 -80967647 - MLT1H LTR MaLR -3 546 137 2075 80 69 0 chr18 5710077 5710353 -80967195 - AluY SINE Alu -16 295 1 2061 111 4 0 chr18 5710410 5710689 -80966859 + AluSp SINE Alu 1 280 -33 246 32 0 0 chr18 5710689 5710720 -80966828 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 215 246 14 58 chr18 5713249 5713318 -80964230 + L2 LINE L2 3182 3247 -66 2009 69 0 44 chr18 5713320 5713594 -80963954 + AluY SINE Alu 49 310 -1 1792 165 17 7 chr18 5713645 5713942 -80963606 - AluSx SINE Alu -11 301 2 390 351 8 15 chr18 5714713 5714847 -80962701 + L2 LINE L2 3181 3313 0 281 339 46 9 chr18 5714960 5715069 -80962479 - L2 LINE L2 -3 3269 3157 1484 149 30 15 chr18 5715675 5715943 -80961605 + L1PA10 LINE L1 5893 6164 -4 1069 179 9 22 chr18 5716436 5716660 -80960888 - Tigger7 DNA MER2_type 0 2491 2271 * 1625 203 29 3 chr18 5716635 5716945 -80960603 - Tigger7 DNA MER2_type -232 318 1 186 43 0 0 chr18 5718365 5718388 -80959160 + (TC)n Simple_repeat Simple_repeat 2 24 0 232 315 185 20 chr18 5718401 5718547 -80959001 + MIR SINE MIR 83 252 -10 2544 50 0 0 chr18 5719478 5719775 -80957773 + AluY SINE Alu 1 297 -14 1553 38 0 0 chr18 5720069 5720252 -80957296 + L1PA7 LINE L1 5961 6143 -11 25 31 0 0 chr18 5720272 5720304 -80957244 + AT_rich Low_complexity Low_complexity 1 32 0 553 259 178 0 chr18 5720640 5720814 -80956734 - MIR SINE MIR 0 262 58 182 373 0 0 chr18 5721072 5721123 -80956425 - L2 LINE L2 -12 3260 3210 304 283 20 50 chr18 5721149 5721248 -80956300 - MIR SINE MIR -161 101 6 313 335 88 15 chr18 5722913 5723111 -80954437 - MIR SINE MIR -12 250 31 710 311 81 38 chr18 5723290 5724445 -80953103 + L1 LINE L1 3120 4323 -1823 4481 205 57 66 chr18 5724474 5724853 -80952695 + L1MC4a LINE L1 6243 6624 -1184 387 0 0 0 chr18 5724853 5724896 -80952652 + (TG)n Simple_repeat Simple_repeat 2 44 0 4481 205 57 66 chr18 5724896 5725906 -80951642 + L1MC4a LINE L1 6624 7619 -189 445 171 12 0 chr18 5725903 5725985 -80951563 + L1MA9 LINE L1 5944 6026 -286 * 540 330 41 25 chr18 5726006 5726373 -80951175 + L1ME3 LINE L1 5769 6141 -21 222 288 0 41 chr18 5728888 5728961 -80948587 - L2 LINE L2 -17 3255 3186 194 172 23 23 chr18 5730125 5730212 -80947336 + (TA)n Simple_repeat Simple_repeat 1 87 0 2877 164 119 8 chr18 5730551 5731141 -80946407 + MER39 LTR ERV1 53 707 0 315 0 0 0 chr18 5731341 5731376 -80946172 + (A)n Simple_repeat Simple_repeat 1 35 0 3854 195 62 31 chr18 5731379 5732257 -80945291 + L1MD2 LINE L1 5445 6349 -10 2339 278 131 50 chr18 5732260 5732330 -80945218 + L2 LINE L2 1697 1760 -1553 2752 7 0 0 chr18 5732330 5732626 -80944922 - AluYb8 SINE Alu 0 318 23 2339 278 131 50 chr18 5732626 5733831 -80943717 + L2 LINE L2 1760 2866 -447 228 135 0 0 chr18 5733831 5733868 -80943680 + (TG)n Simple_repeat Simple_repeat 2 38 0 2339 278 131 50 chr18 5733868 5733904 -80943644 + L2 LINE L2 2866 2898 -415 1883 120 15 0 chr18 5733904 5734170 -80943378 - AluSx SINE Alu -3 309 40 2339 278 131 50 chr18 5734170 5734323 -80943225 + L2 LINE L2 2898 3313 0 840 317 87 30 chr18 5734812 5735272 -80942276 - L2 LINE L2 -3 3310 2825 325 278 35 35 chr18 5735806 5735921 -80941627 - L2 LINE L2 -575 2739 2625 272 356 0 0 chr18 5735921 5736022 -80941526 + LTR48B LTR ERV1 1 101 -543 * 1130 227 95 48 chr18 5735996 5736411 -80941137 + MER39 LTR ERV1 214 686 -21 443 315 48 99 chr18 5736411 5736954 -80940594 - L2 LINE L2 -668 2646 2132 1761 133 89 4 chr18 5737452 5737723 -80939825 + AluSq SINE Alu 1 294 -19 5482 179 23 4 chr18 5738036 5739522 -80938026 + L1MB3 LINE L1 4662 6181 -2 313 208 23 44 chr18 5739513 5739660 -80937888 + L1M4 LINE L1 70 497 -6358 * 272 279 64 118 chr18 5739777 5740217 -80937331 + L1M4 LINE L1 798 1213 -5642 7773 20 0 0 chr18 5740237 5741171 -80936377 + L1PA3 LINE L1 5218 6151 -4 334 241 135 43 chr18 5741217 5741358 -80936190 + L1M4 LINE L1 1230 1383 -5476 * 2295 187 0 0 chr18 5741352 5741806 -80935742 - L1P LINE L1 -2936 3210 2757 616 267 22 0 chr18 5741896 5742076 -80935472 + L1M4 LINE L1 3737 3920 -3037 888 245 31 19 chr18 5742082 5742343 -80935205 + L1MB8 LINE L1 5913 6176 -2 792 189 37 21 chr18 5743211 5743401 -80934147 + MER106A DNA MER1_type 44 236 0 234 0 0 0 chr18 5743760 5743786 -80933762 + (A)n Simple_repeat Simple_repeat 1 26 0 2072 94 0 0 chr18 5744355 5744620 -80932928 + AluY SINE Alu 33 297 -14 1801 154 65 37 chr18 5745028 5745389 -80932159 + MLT2D LTR ERVL 1 376 -38 339 25 0 0 chr18 5745389 5745429 -80932119 + (CA)n Simple_repeat Simple_repeat 1 40 0 1801 154 65 37 chr18 5745429 5745470 -80932078 + MLT2D LTR ERVL 376 414 0 202 333 58 33 chr18 5745795 5745915 -80931633 - MIR SINE MIR -63 145 23 303 299 37 0 chr18 5745953 5746060 -80931488 + (TATG)n Simple_repeat Simple_repeat 2 112 0 23 33 0 0 chr18 5746215 5746245 -80931303 + AT_rich Low_complexity Low_complexity 1 30 0 216 0 0 0 chr18 5746565 5746589 -80930959 + (A)n Simple_repeat Simple_repeat 1 24 0 202 324 110 48 chr18 5746661 5747205 -80930343 - L2 LINE L2 -555 2759 2182 243 330 169 8 chr18 5747853 5747971 -80929577 - L2 LINE L2 0 3272 3136 234 306 148 0 chr18 5749039 5749147 -80928401 - L2 LINE L2 -1 3271 3148 2302 106 0 3 chr18 5749393 5749704 -80927844 + AluSx SINE Alu 1 310 -2 266 315 88 73 chr18 5749823 5750096 -80927452 - L2 LINE L2 -527 2787 2511 205 211 39 0 chr18 5750613 5750665 -80926883 - L2 LINE L2 -927 2387 2334 442 278 110 74 chr18 5750776 5751276 -80926272 + HAL1b LINE L1 249 766 -582 203 156 0 0 chr18 5753881 5753913 -80923635 + (CA)n Simple_repeat Simple_repeat 1 32 0 389 285 75 12 chr18 5754500 5754694 -80922854 + L1ME LINE L1 5515 5724 -397 44 84 0 0 chr18 5754791 5754898 -80922650 + AT_rich Low_complexity Low_complexity 1 107 0 209 245 0 0 chr18 5755972 5756026 -80921522 + GA-rich Low_complexity Low_complexity 3 94 0 2281 111 42 36 chr18 5758540 5758901 -80918647 - THE1B LTR MaLR 0 364 2 245 299 284 0 chr18 5758933 5759067 -80918481 + MIR SINE MIR 2 173 -89 250 267 30 50 chr18 5760212 5760313 -80917235 + MIR3 SINE MIR 1 99 -109 192 315 27 0 chr18 5761034 5761107 -80916441 + MIR SINE MIR 179 253 -9 189 0 0 0 chr18 5761800 5761821 -80915727 + (CAATA)n Simple_repeat Simple_repeat 5 25 0 1823 98 16 8 chr18 5764434 5764672 -80912876 + AluSg SINE Alu 38 280 -30 441 0 0 0 chr18 5764672 5764721 -80912827 + (CA)n Simple_repeat Simple_repeat 1 49 0 281 324 173 28 chr18 5764974 5765338 -80912210 - L2 LINE L2 -829 2485 2069 4222 156 7 12 chr18 5765539 5766283 -80911265 + L1MB2 LINE L1 5430 6169 -2 268 226 85 9 chr18 5766330 5766436 -80911112 + L1ME4a LINE L1 6002 6115 -6 238 356 93 25 chr18 5766704 5766822 -80910726 - L2 LINE L2 0 3272 3147 3285 156 60 7 chr18 5766953 5767555 -80909993 - L1MC1 LINE L1 -6 6327 5694 909 316 66 66 chr18 5769452 5770455 -80907093 + L2 LINE L2 2239 3257 -56 2209 127 6 12 chr18 5770455 5770794 -80906754 - MER1B DNA MER1_type 0 337 1 909 316 66 66 chr18 5770794 5770851 -80906697 + L2 LINE L2 3257 3313 0 646 314 38 17 chr18 5773738 5773977 -80903571 + MIR SINE MIR 19 262 0 2201 106 0 0 chr18 5775576 5775877 -80901671 - AluSc SINE Alu -8 301 1 409 321 72 27 chr18 5776092 5776313 -80901235 - MIR SINE MIR -27 235 5 243 286 33 11 chr18 5777510 5777601 -80899947 - MER5A DNA MER1_type -96 93 1 275 100 25 0 chr18 5778707 5778747 -80898801 + MER5A DNA MER1_type 119 159 -30 263 336 41 55 chr18 5779213 5779359 -80898189 - MIR SINE MIR -70 192 49 23 54 0 0 chr18 5780340 5780377 -80897171 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr18 5780433 5780457 -80897091 + AT_rich Low_complexity Low_complexity 1 24 0 3394 132 82 7 chr18 5782492 5783067 -80894481 - MER51A LTR ERV1 -16 618 1 338 256 51 17 chr18 5783121 5783238 -80894310 - MIR SINE MIR -74 188 68 1772 109 0 16 chr18 5784244 5784491 -80893057 + AluSx SINE Alu 1 243 -69 354 23 0 0 chr18 5784508 5784551 -80892997 + (TAAA)n Simple_repeat Simple_repeat 1 43 0 207 365 0 0 chr18 5784568 5784642 -80892906 - L2 LINE L2 -7 3265 3192 324 300 95 52 chr18 5785254 5785581 -80891967 + L1ME LINE L1 5305 5645 -2163 336 24 0 0 chr18 5785608 5785649 -80891899 + (CA)n Simple_repeat Simple_repeat 2 42 0 254 159 23 68 chr18 5785663 5785751 -80891797 + L1ME LINE L1 5718 5801 -365 1270 80 15 0 chr18 5786239 5786439 -80891109 - L1P5 LINE L1 -670 5481 5279 3047 136 8 11 chr18 5786439 5786962 -80890586 + L1PB1 LINE L1 5631 6151 0 496 237 59 54 chr18 5787201 5787387 -80890161 + L1ME3A LINE L1 5523 5709 -461 269 179 71 0 chr18 5787418 5787474 -80890074 + L1ME3A LINE L1 5810 5869 -301 767 240 70 57 chr18 5787566 5787866 -80889682 + LTR16A LTR ERVL 138 441 -9 1091 264 123 24 chr18 5788170 5788633 -80888915 - MLT1G1 LTR MaLR -2 593 85 1138 329 100 19 chr18 5788813 5789622 -80887926 + HERV16 LTR ERVL 491 1365 -3631 379 332 106 9 chr18 5790038 5790255 -80887293 + LTR16A LTR ERVL 207 444 -6 740 267 36 36 chr18 5790260 5790541 -80887007 + L1ME3A LINE L1 5881 6161 -9 236 306 188 11 chr18 5790653 5790839 -80886709 + MIR SINE MIR 29 247 -15 2108 117 7 7 chr18 5791089 5791387 -80886161 + AluSx SINE Alu 1 298 -14 293 362 24 8 chr18 5791469 5791596 -80885952 + MIR SINE MIR 22 150 -112 225 182 0 0 chr18 5791665 5791720 -80885828 - L1MC4 LINE L1 -1336 6706 6652 485 242 62 8 chr18 5792316 5792444 -80885104 + MIR SINE MIR 49 183 -79 249 291 13 0 chr18 5793427 5793506 -80884042 + MIR SINE MIR 1 80 -182 1376 156 137 35 chr18 5793692 5794127 -80883421 + Charlie1b DNA MER1_type 40 523 0 229 238 57 67 chr18 5794148 5794253 -80883295 + L1ME4a LINE L1 5 108 -6318 1799 257 37 49 chr18 5794423 5795747 -80881801 + L1ME4a LINE L1 292 1596 -4830 473 151 0 0 chr18 5795769 5795842 -80881706 - THE1B LTR MaLR 0 364 292 1225 66 30 12 chr18 5795844 5796010 -80881538 - THE1B LTR MaLR -195 169 1 1730 241 109 35 chr18 5796015 5797090 -80880458 + L1ME4a LINE L1 1869 3023 -3403 301 324 93 50 chr18 5797125 5797446 -80880102 + L2 LINE L2 2049 2383 -931 1202 235 90 59 chr18 5797693 5798183 -80879365 - MLT1D LTR MaLR 0 505 1 311 269 71 107 chr18 5798189 5798348 -80879200 + L1ME4a LINE L1 5744 5888 -513 2055 140 0 16 chr18 5798348 5798663 -80878885 - AluSx SINE Alu -2 310 1 311 269 71 107 chr18 5798663 5798812 -80878736 + L1ME4a LINE L1 5888 6041 -360 25 65 0 0 chr18 5798824 5798870 -80878678 + AT_rich Low_complexity Low_complexity 1 46 0 350 338 62 0 chr18 5798879 5799039 -80878509 + L1ME4a LINE L1 6057 6226 -175 26 30 0 0 chr18 5799282 5799315 -80878233 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr18 5800503 5800523 -80877025 + (A)n Simple_repeat Simple_repeat 1 20 0 2160 115 3 0 chr18 5800523 5800811 -80876737 + AluSg SINE Alu 1 289 -21 403 271 8 51 chr18 5802266 5802384 -80875164 - L2 LINE L2 -2 3311 3199 338 264 98 45 chr18 5803163 5803409 -80874139 + MIR SINE MIR 4 262 0 2109 155 42 35 chr18 5804756 5804951 -80872597 + MSTA LTR MaLR 1 193 -235 2121 121 0 3 chr18 5804951 5805241 -80872307 + AluSx SINE Alu 1 289 -23 2109 155 42 35 chr18 5805241 5805470 -80872078 + MSTA LTR MaLR 193 428 0 390 291 104 62 chr18 5806154 5806652 -80870896 + L1ME3 LINE L1 5429 5947 -215 318 257 22 73 chr18 5807000 5807136 -80870412 + MIR3 SINE MIR 53 181 -27 402 39 0 0 chr18 5807146 5807198 -80870350 + (TG)n Simple_repeat Simple_repeat 1 52 0 251 130 0 56 chr18 5807228 5807282 -80870266 - L1MA9 LINE L1 -1 6311 6261 1181 150 164 9 chr18 5809142 5809241 -80868307 - L1MA9 LINE L1 -20 6280 6198 333 0 0 0 chr18 5809241 5809278 -80868270 + (TG)n Simple_repeat Simple_repeat 1 37 0 1181 150 164 9 chr18 5809278 5809476 -80868072 - L1MA9 LINE L1 -102 6198 5945 334 256 74 91 chr18 5809804 5809980 -80867568 + MIR3 SINE MIR 30 202 -6 182 130 241 19 chr18 5810206 5810260 -80867288 - L2 LINE L2 -55 3258 3193 281 267 44 0 chr18 5810889 5810979 -80866569 + MLT1G LTR MaLR 474 567 -23 191 321 109 64 chr18 5811584 5812004 -80865544 - L2 LINE L2 -457 2857 2419 995 178 16 5 chr18 5812967 5813152 -80864396 - MER5A DNA MER1_type 0 189 3 422 333 24 12 chr18 5813162 5813327 -80864221 - MER5B DNA MER1_type -4 174 8 1726 174 75 3 chr18 5814003 5814324 -80863224 + MER2 DNA MER2_type 1 344 0 987 51 0 0 chr18 5814992 5815110 -80862438 + AluY SINE Alu 191 308 -3 208 308 33 22 chr18 5815503 5815594 -80861954 - MIR3 SINE MIR -11 197 106 1278 166 5 27 chr18 5816176 5816399 -80861149 + AluJo SINE Alu 2 219 -93 663 182 3 0 chr18 5916399 5916787 -80760761 + HSAT4 Satellite centromeric 1 388 -25 1168 220 46 3 chr18 5916933 5919002 -80758546 - GSATX Satellite centromeric -4 2157 1 1063 158 3 0 chr18 5919112 5921459 -80756089 - ALR/Alpha Satellite centromeric 0 2353 1 1285 203 4 4 chr18 5921559 5923005 -80754543 + GSATX Satellite centromeric 1 1446 0 1059 237 4 5 chr18 5923016 5925333 -80752215 + GSATX Satellite centromeric 1 2312 -68 28345 54 3 1 chr18 5925479 5929955 -80747593 - L1PA4 LINE L1 -81 6074 1588 3478 103 0 0 chr18 5929953 5930421 -80747127 + L1P LINE L1 7 474 -5672 * 1022 162 2 4 chr18 5930423 5932082 -80745466 - ALR/Alpha Satellite centromeric 0 1654 1 257 146 0 0 chr18 5932184 5932232 -80745316 + GSATX Satellite centromeric 135 182 -36 288 298 20 40 chr18 5932270 5932421 -80745127 + GSAT Satellite centromeric 69 216 -1 * 1179 227 8 3 chr18 5932288 5933779 -80743769 + GSATX Satellite centromeric 1 1497 -27 997 200 0 0 chr18 5933872 5934062 -80743486 + GSATX Satellite centromeric 1 190 -28 1211 211 11 4 chr18 5934107 5935614 -80741934 + GSATX Satellite centromeric 1 1517 -36 1113 219 13 5 chr18 5935625 5941040 -80736508 + GSATX Satellite centromeric 1 5457 -36 744 239 6 3 chr18 5941088 5941327 -80736221 + GSATX Satellite centromeric 1 239 -11 1335 188 23 8 chr18 5941411 5947611 -80729937 + GSATX Satellite centromeric 1 6296 -9 1248 143 5 1 chr18 5947711 5960524 -80717024 + ALR/Alpha Satellite centromeric 1 12864 -6 1252 147 6 2 chr18 5960538 5970326 -80707222 + ALR/Alpha Satellite centromeric 1 9828 -61 1131 160 14 0 chr18 5970430 5972488 -80705060 - ALR/Alpha Satellite centromeric 0 2085 1 1171 151 0 0 chr18 5972499 5972961 -80704587 - ALR/Alpha Satellite centromeric 0 462 1 7234 69 0 0 chr18 5972962 5973859 -80703689 + MER11D LTR ERVK 1 897 0 1245 147 9 2 chr18 5973859 5984680 -80692868 + ALR/Alpha Satellite centromeric 1 10902 -56 1241 145 4 3 chr18 5984784 6006428 -80671120 + ALR/Alpha Satellite centromeric 1 21661 0 1212 149 5 2 chr18 6006439 6013823 -80663725 - ALR/Alpha Satellite centromeric 0 7403 1 1169 147 4 2 chr18 6013923 6016394 -80661154 - ALR/Alpha Satellite centromeric 0 2475 1 563 64 0 0 chr18 6016488 6016566 -80660982 - L1PA4 LINE L1 -3 6152 6075 1148 153 7 3 chr18 6016670 6019092 -80658456 - ALR/Alpha Satellite centromeric 0 2431 1 1207 145 4 2 chr18 6019104 6035401 -80642147 - ALR/Alpha Satellite centromeric 0 16319 1 1167 167 5 8 chr18 6035502 6038164 -80639384 + ALR/Alpha Satellite centromeric 1 2654 -58 1150 155 8 0 chr18 6038269 6042568 -80634980 + ALR/Alpha Satellite centromeric 1 4333 -31 815 157 40 3 chr18 6042671 6042893 -80634655 - ALR/Alpha Satellite centromeric 0 230 1 1091 182 9 1 chr18 6042908 6046854 -80630694 - ALR/Alpha Satellite centromeric -2 3977 1 * 1098 204 37 3 chr18 6046849 6047346 -80630202 - GSATX Satellite centromeric 0 514 1 1189 207 4 5 chr18 6047448 6048922 -80628626 - GSATX Satellite centromeric 0 1472 1 1379 188 9 9 chr18 6048933 6051913 -80625635 - GSATX Satellite centromeric 0 2980 1 594 212 6 0 chr18 6052014 6052853 -80624695 - HSAT4 Satellite centromeric -5 844 1 2306 110 3 0 chr18 6052853 6053154 -80624394 - AluSp SINE Alu -11 302 1 671 207 5 4 chr18 6053157 6055229 -80622319 - HSAT4 Satellite centromeric 0 6858 4790 2141 124 3 0 chr18 6055229 6055520 -80622028 - AluSp SINE Alu -19 294 3 671 207 5 4 chr18 6055520 6060006 -80617542 - HSAT4 Satellite centromeric -2068 4790 1 2270 106 3 0 chr18 6060006 6060326 -80617222 - AluSc SINE Alu 0 322 2 629 226 5 0 chr18 6060329 6062429 -80615119 - HSAT4 Satellite centromeric -2 2110 1 634 200 5 0 chr18 6062450 6064104 -80613444 - HSAT4 Satellite centromeric -2 1663 1 663 215 7 3 chr18 6064136 6073592 -80603956 - HSAT4 Satellite centromeric -2 9493 1 773 248 85 2 chr18 6073603 6075754 -80601794 - GSATX Satellite centromeric -4 2330 1 256 231 0 39 chr18 6075830 6075908 -80601640 - GSATII Satellite centromeric -34 182 108 * 268 242 0 0 chr18 6075843 6075909 -80601639 - GSATX Satellite centromeric -46 172 107 750 254 76 2 chr18 6075921 6078191 -80599357 + GSATX Satellite centromeric 1 2439 -66 716 262 66 1 chr18 6078233 6079111 -80598437 + GSATX Satellite centromeric 1 934 0 448 338 6 0 chr18 6079144 6079304 -80598244 + GSATX Satellite centromeric 58 218 0 704 245 80 4 chr18 6079342 6080643 -80596905 + GSATX Satellite centromeric 1 1399 -2 834 219 110 0 chr18 6080680 6082508 -80595040 + GSATX Satellite centromeric 1 2029 -1 967 229 55 7 chr18 6082527 6085265 -80592283 + GSATX Satellite centromeric 1 2870 0 742 208 0 0 chr18 6085378 6085537 -80592011 + ALR/Alpha Satellite centromeric 2 160 -11 1022 193 6 8 chr18 6085552 6087050 -80590498 + ALR/Alpha Satellite centromeric 1 1494 -47 1200 158 3 7 chr18 6087152 6087193 -80590355 - ALR/Alpha Satellite centromeric 0 12170 12130 11900 53 1 2 chr18 6087193 6089473 -80588075 - L1PA4 LINE L1 -1 6154 3875 1200 158 3 7 chr18 6089473 6099371 -80578177 - ALR/Alpha Satellite centromeric -40 12130 1 1138 169 7 4 chr18 6099383 6104545 -80573003 - ALR/Alpha Satellite centromeric 0 7215 1734 2790 7 0 0 chr18 6104545 6104845 -80572703 - AluYa5 SINE Alu -11 300 1 1138 169 7 4 chr18 6104845 6106583 -80570965 - ALR/Alpha Satellite centromeric -5481 1734 1 1471 138 0 9 chr18 6106583 6106807 -80570741 + L1P LINE L1 5 226 -5920 1127 171 7 0 chr18 6106912 6109527 -80568021 + ALR/Alpha Satellite centromeric 1 2632 -31 1146 166 6 1 chr18 6109632 6112486 -80565062 + ALR/Alpha Satellite centromeric 1 2868 -36 1160 165 7 5 chr18 6112603 6112932 -80564616 + ALR/Alpha Satellite centromeric 1 328 -2205 2816 10 0 0 chr18 6112932 6113239 -80564309 + AluY SINE Alu 1 307 -4 1160 165 7 5 chr18 6113239 6115132 -80562416 + ALR/Alpha Satellite centromeric 328 2533 0 1219 169 8 1 chr18 6115144 6119488 -80558060 + ALR/Alpha Satellite centromeric 1 4375 0 1182 154 4 2 chr18 6119592 6127927 -80549621 + ALR/Alpha Satellite centromeric 1 8348 0 1074 171 5 4 chr18 6127938 6132035 -80545513 + ALR/Alpha Satellite centromeric 1 4098 -8 6505 125 4 3 chr18 6132035 6133003 -80544545 - LTR5 LTR ERVK 0 969 1 1227 171 4 2 chr18 6133015 6150519 -80527029 + ALR/Alpha Satellite centromeric 1 17535 -48 1047 173 4 3 chr18 6150548 6155647 -80521901 + ALR/Alpha Satellite centromeric 1 5100 -65 31089 70 3 5 chr18 6155648 6159768 -80517780 + L1P LINE L1 1 4114 -2032 1098 182 4 1 chr18 6159868 6162397 -80515151 + ALR/Alpha Satellite centromeric 1 2536 0 1160 177 10 3 chr18 6162408 6167397 -80510151 + ALR/Alpha Satellite centromeric 1 5024 0 11415 51 9 1 chr18 6167407 6170122 -80507426 - L1PA3 LINE L1 -1 6154 3308 6275 46 0 0 chr18 6170121 6170930 -80506618 + L1PA3 LINE L1 2485 3293 -2853 * 1041 162 13 12 chr18 6170932 6174405 -80503143 + ALR/Alpha Satellite centromeric 1 3475 0 2875 27 0 0 chr18 6174414 6174751 -80502797 + L1PA2 LINE L1 5814 6150 -5 2196 144 11 11 chr18 6174771 6175146 -80502402 + L1PB1 LINE L1 5769 6143 -8 27 49 0 0 chr18 6175146 6175187 -80502361 + AT_rich Low_complexity Low_complexity 1 41 0 1016 178 2 1 chr18 6175212 6176480 -80501068 + ALR/Alpha Satellite centromeric 1 1269 -13 1040 182 3 4 chr18 6176493 6179548 -80498000 + ALR/Alpha Satellite centromeric 1 3053 -35 1109 167 5 3 chr18 6179559 6188710 -80488838 + ALR/Alpha Satellite centromeric 1 9171 -11 1024 178 2 2 chr18 6188725 6190698 -80486850 + ALR/Alpha Satellite centromeric 1 1972 0 306 0 0 0 chr18 6190733 6190767 -80486781 + (TTA)n Simple_repeat Simple_repeat 3 36 0 7507 29 1 1 chr18 6190767 6192239 -80485309 - L1PA3 LINE L1 -18 6137 4666 5212 35 0 0 chr18 6192239 6192863 -80484685 + L1PA3 LINE L1 4030 4653 -1493 1112 161 5 3 chr18 6192863 6202664 -80474884 + ALR/Alpha Satellite centromeric 1 9826 -3 1108 161 6 2 chr18 6202764 6207596 -80469952 + ALR/Alpha Satellite centromeric 1 4847 -61 5962 46 34 13 chr18 6207706 6208452 -80469096 + SVA Other Other 626 1386 0 1147 172 6 3 chr18 6208457 6212817 -80464731 - ALR/Alpha Satellite centromeric 0 18990 14646 2034 147 0 0 chr18 6212817 6213116 -80464432 + AluY SINE Alu 1 299 -12 1147 172 6 3 chr18 6213116 6227383 -80450165 - ALR/Alpha Satellite centromeric -4344 14646 1 1028 175 6 1 chr18 6227426 6229113 -80448435 - ALR/Alpha Satellite centromeric -6 1695 1 41404 60 6 5 chr18 6229115 6235259 -80442289 - L1PA4 LINE L1 -3 6152 1 1059 168 8 5 chr18 6235263 6236908 -80440640 - ALR/Alpha Satellite centromeric 0 7695 6056 2883 13 0 0 chr18 6236908 6237223 -80440325 + AluYb8 SINE Alu 1 315 -3 1059 168 8 5 chr18 6237223 6242939 -80434609 - ALR/Alpha Satellite centromeric -1639 6056 1 5069 47 0 0 chr18 6242939 6243577 -80433971 - L1PA3 LINE L1 -1367 4779 4142 7072 44 8 1 chr18 6243577 6244911 -80432637 + L1PA3 LINE L1 4797 6135 -20 372 22 0 0 chr18 6244914 6244959 -80432589 + (TAA)n Simple_repeat Simple_repeat 1 45 0 1066 182 5 2 chr18 6244965 6246675 -80430873 - ALR/Alpha Satellite centromeric 0 1716 1 1083 175 5 3 chr18 6246686 6254558 -80422990 - ALR/Alpha Satellite centromeric 0 7888 1 7174 35 0 2 chr18 6254558 6255758 -80421790 - L1PA3 LINE L1 -3 6152 4935 1002 90 0 26 chr18 6255762 6255918 -80421630 - L1PA3 LINE L1 -1445 4701 4550 1168 177 9 4 chr18 6256018 6263069 -80414479 - ALR/Alpha Satellite centromeric -1 7088 1 1069 184 7 7 chr18 6263080 6267340 -80410208 - ALR/Alpha Satellite centromeric 0 4259 1 1036 180 10 4 chr18 6267351 6272038 -80405510 - ALR/Alpha Satellite centromeric 0 4715 1 2551 11 0 4 chr18 6272138 6272419 -80405129 - AluYa5 SINE Alu -31 280 1 1162 170 9 3 chr18 6272420 6284691 -80392857 - ALR/Alpha Satellite centromeric -1 12347 1 836 165 17 40 chr18 6284719 6284985 -80392563 + ALR/Alpha Satellite centromeric 1 260 0 2208 122 0 0 chr18 6385429 6385717 -80291831 - AluSg SINE Alu -22 288 1 198 0 0 0 chr18 6385717 6385739 -80291809 + (T)n Simple_repeat Simple_repeat 1 22 0 27 73 0 0 chr18 6386521 6386576 -80290972 + GC_rich Low_complexity Low_complexity 1 55 0 189 0 0 0 chr18 6387095 6387116 -80290432 + (GA)n Simple_repeat Simple_repeat 2 22 0 2197 111 17 0 chr18 6387859 6388157 -80289391 - AluSx SINE Alu -9 303 1 30 51 0 0 chr18 6389518 6389557 -80287991 + GC_rich Low_complexity Low_complexity 1 39 0 1222 89 15 0 chr18 6389876 6390079 -80287469 - L1P5 LINE L1 -667 5484 5279 3099 138 8 11 chr18 6390079 6390602 -80286946 + L1PB1 LINE L1 5631 6151 0 488 239 65 49 chr18 6390841 6391025 -80286523 + L1ME LINE L1 5523 5709 -461 269 179 71 0 chr18 6391056 6391112 -80286436 + L1ME LINE L1 5810 5869 -301 767 240 70 57 chr18 6391204 6391504 -80286044 + LTR16A LTR ERVL 138 441 -9 460 255 99 7 chr18 6391807 6391948 -80285600 - MLT1H1 LTR MaLR -2 553 400 347 264 98 45 chr18 6392582 6392828 -80284720 + MIR SINE MIR 4 262 0 2109 155 42 35 chr18 6394175 6394370 -80283178 + MSTA LTR MaLR 1 193 -235 2109 124 0 3 chr18 6394370 6394660 -80282888 + AluSx SINE Alu 1 289 -23 2109 155 42 35 chr18 6394660 6394889 -80282659 + MSTA LTR MaLR 193 428 0 333 298 0 73 chr18 6395573 6395758 -80281790 + L1ME3 LINE L1 5429 5601 -569 25 0 0 0 chr18 6397358 6397383 -80280165 + AT_rich Low_complexity Low_complexity 1 25 0 521 342 106 33 chr18 6399994 6400295 -80277253 + L2 LINE L2 2950 3272 0 244 338 105 8 chr18 6401675 6401808 -80275740 - L2 LINE L2 -223 3049 2904 22 0 0 0 chr18 6402216 6402238 -80275310 + AT_rich Low_complexity Low_complexity 1 22 0 962 265 103 23 chr18 6402421 6403132 -80274416 - L1ME3 LINE L1 -221 5945 5165 261 0 0 0 chr18 6403380 6403409 -80274139 + (CTG)n Simple_repeat Simple_repeat 2 30 0 223 312 54 21 chr18 6403959 6404052 -80273496 + L2 LINE L2 2995 3090 -182 2683 19 0 0 chr18 6404240 6404551 -80272997 + L1PA2 LINE L1 5844 6154 -1 479 295 57 57 chr18 6404867 6405077 -80272471 + MIR SINE MIR 43 252 -10 237 298 67 43 chr18 6406440 6406648 -80270900 + L1ME3 LINE L1 5735 5947 -215 318 257 22 73 chr18 6406997 6407133 -80270415 + MIR3 SINE MIR 53 181 -27 438 36 0 0 chr18 6407143 6407199 -80270349 + (TG)n Simple_repeat Simple_repeat 1 56 0 251 130 0 56 chr18 6407229 6407283 -80270265 - L1MA9 LINE L1 -1 6311 6261 1171 153 164 9 chr18 6409147 6409246 -80268302 - L1MA9 LINE L1 -20 6280 6198 402 21 0 0 chr18 6409246 6409293 -80268255 + (TG)n Simple_repeat Simple_repeat 1 47 0 1171 153 164 9 chr18 6409293 6409491 -80268057 - L1MA9 LINE L1 -102 6198 5945 334 256 74 91 chr18 6409819 6409995 -80267553 + MIR3 SINE MIR 30 202 -6 182 130 241 19 chr18 6410221 6410275 -80267273 - L2 LINE L2 -55 3258 3193 281 267 44 0 chr18 6410903 6410993 -80266555 + MLT1G LTR MaLR 474 567 -23 191 321 109 64 chr18 6411598 6412018 -80265530 - L2 LINE L2 -457 2857 2419 995 178 16 5 chr18 6412981 6413166 -80264382 - MER5A DNA MER1_type 0 189 3 422 333 24 12 chr18 6413176 6413341 -80264207 - MER5B DNA MER1_type -4 174 8 1750 171 75 3 chr18 6414017 6414338 -80263210 + MER2 DNA MER2_type 1 344 0 993 50 0 0 chr18 6415005 6415124 -80262424 + AluY SINE Alu 191 309 -2 208 308 33 22 chr18 6415517 6415608 -80261940 - MIR3 SINE MIR -11 197 106 1669 183 3 29 chr18 6416190 6416501 -80261047 + AluJo SINE Alu 2 304 -8 2457 74 0 7 chr18 6416502 6416811 -80260737 + AluY SINE Alu 1 307 -4 2130 119 0 26 chr18 6418654 6418964 -80258584 - AluSg SINE Alu -8 302 1 203 308 115 29 chr18 6418965 6419069 -80258479 + MIR SINE MIR 150 262 0 522 238 12 108 chr18 6419413 6419653 -80257895 + L2 LINE L2 3097 3313 0 17860 173 20 17 chr18 6420235 6420416 -80257132 - L1 LINE L1 -1410 6155 5976 2343 91 3 3 chr18 6420416 6420723 -80256825 - AluY SINE Alu -4 307 1 17860 173 20 17 chr18 6420723 6421513 -80256035 - L1 LINE L1 -1589 5976 5190 4701 63 0 2 chr18 6421513 6422099 -80255449 - LTR14C LTR ERVK 0 587 3 17860 173 20 17 chr18 6422099 6424306 -80253242 - L1 LINE L1 -2375 5190 2990 1861 186 0 3 chr18 6424306 6424618 -80252930 - AluSq SINE Alu -2 311 1 17860 173 20 17 chr18 6424618 6425710 -80251838 - L1 LINE L1 -4575 2990 1902 2365 148 3 3 chr18 6425710 6426074 -80251474 - THE1B LTR MaLR 0 364 1 9824 112 38 40 chr18 6426074 6427657 -80249891 - THE1B-int LTR MaLR 0 1580 1 2552 101 17 0 chr18 6427657 6428015 -80249533 - THE1B LTR MaLR 0 364 1 17860 173 20 17 chr18 6428015 6429406 -80248142 - L1 LINE L1 -5662 1903 477 1407 283 47 18 chr18 6429696 6430148 -80247400 - MLT1E LTR MaLR -1 592 128 30 27 0 0 chr18 6430311 6430348 -80247200 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr18 6431360 6431380 -80246168 + (T)n Simple_repeat Simple_repeat 1 20 0 314 280 57 110 chr18 6432009 6432233 -80245315 + L1ME3A LINE L1 546 748 -5322 3116 92 12 2 chr18 6432233 6432656 -80244892 + MSTA LTR MaLR 2 428 0 314 280 57 110 chr18 6432656 6432767 -80244781 + L1ME3A LINE L1 748 863 -5207 614 308 65 43 chr18 6432778 6433521 -80244027 + L1ME3A LINE L1 927 1685 -4576 368 275 90 7 chr18 6433620 6434019 -80243529 + L1ME3A LINE L1 4946 5372 -724 391 292 53 36 chr18 6434085 6434327 -80243221 + L1ME3A LINE L1 5849 6104 0 1902 116 8 4 chr18 6434523 6434791 -80242757 + AluSg SINE Alu 29 297 -13 307 293 114 31 chr18 6434830 6435120 -80242428 - HAL1b LINE L1 -537 811 498 21 36 0 0 chr18 6435846 6435874 -80241674 + AT_rich Low_complexity Low_complexity 1 28 0 792 293 34 42 chr18 6435932 6436311 -80241237 - HERV16 LTR ERVL -2257 2739 2364 204 254 55 0 chr18 6436453 6436508 -80241040 + MIR SINE MIR 185 242 -20 476 289 162 5 chr18 6437461 6437665 -80239883 - MIR SINE MIR -22 240 5 1353 184 16 4 chr18 6438099 6438355 -80239193 + Tigger7 DNA MER2_type 9 267 -2220 3066 175 51 16 chr18 6438374 6438996 -80238552 + MER6 DNA MER2_type 1 644 -221 565 244 0 8 chr18 6439018 6439141 -80238407 - AluJo SINE Alu -71 241 120 1390 100 13 35 chr18 6439141 6439371 -80238177 + MER6 DNA MER2_type 641 865 0 381 219 37 24 chr18 6439371 6439453 -80238095 + Tigger7 DNA MER2_type 2505 2587 0 554 263 26 57 chr18 6439771 6439999 -80237549 + L2 LINE L2 3093 3313 0 520 331 67 21 chr18 6441428 6441848 -80235700 + HAL1 LINE L1 1327 1765 -742 2124 95 3 44 chr18 6442288 6442603 -80234945 - AluSg SINE Alu -8 302 1 323 352 39 30 chr18 6442693 6442923 -80234625 + L1MC/D LINE L1 5040 5271 -875 1207 52 7 0 chr18 6444625 6444779 -80232769 - AluY SINE Alu -1 310 156 274 268 119 6 chr18 6445014 6445210 -80232338 - L1PA8A LINE L1 -669 5506 5294 27 49 0 0 chr18 6445578 6445619 -80231929 + AT_rich Low_complexity Low_complexity 1 41 0 966 258 42 146 chr18 6445652 6446412 -80231136 + MER77 LTR ERV1 24 569 -36 228 233 0 50 chr18 6446439 6446499 -80231049 - L1MD2 LINE L1 -55 6304 6248 3145 237 73 40 chr18 6446506 6447358 -80230190 - L1MD2 LINE L1 -169 6190 5368 1900 146 0 55 chr18 6447358 6447687 -80229861 - AluJb SINE Alu -1 311 1 3145 237 73 40 chr18 6447687 6449525 -80228023 - L1MD2 LINE L1 -991 5368 3371 2038 99 42 7 chr18 6449941 6450224 -80227324 + AluSp SINE Alu 1 293 -20 31 44 0 0 chr18 6450496 6450541 -80227007 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr18 6450597 6450618 -80226930 + AT_rich Low_complexity Low_complexity 1 21 0 367 287 105 53 chr18 6450785 6450994 -80226554 + L2 LINE L2 3000 3219 -94 444 254 51 0 chr18 6451239 6451357 -80226191 - FLAM_A SINE Alu -6 136 13 23 78 0 0 chr18 6451939 6451990 -80225558 + AT_rich Low_complexity Low_complexity 1 51 0 332 330 59 17 chr18 6452033 6452269 -80225279 + L1MC/D LINE L1 5340 5585 -2223 868 227 30 10 chr18 6452866 6453082 -80224466 - MLT1A2 LTR MaLR 0 410 193 267 253 10 81 chr18 6453232 6453331 -80224217 + MLT1H1 LTR MaLR 263 354 -195 350 193 168 25 chr18 6453377 6453496 -80224052 + MLT1H1 LTR MaLR 414 549 -6 4448 127 9 9 chr18 6453822 6453859 -80223689 + L1P LINE L1 2521 2557 -3589 6823 79 6 0 chr18 6453859 6454793 -80222755 - L1PA8 LINE L1 0 6172 5236 4448 127 9 9 chr18 6454793 6455494 -80222054 + L1P LINE L1 2556 3259 -2887 2392 174 16 27 chr18 6455897 6456385 -80221163 - L1PB4 LINE L1 -2 6154 5672 195 280 27 13 chr18 6456506 6456581 -80220967 + MIR3 SINE MIR 132 207 -1 21 57 0 0 chr18 6456917 6456952 -80220596 + AT_rich Low_complexity Low_complexity 1 35 0 585 291 102 34 chr18 6459754 6460286 -80217262 + L1M4 LINE L1 4106 4673 -1473 236 278 112 47 chr18 6460363 6460532 -80217016 + L1MEc LINE L1 1576 1755 -4641 3598 205 36 31 chr18 6460555 6461648 -80215900 + L1MB7 LINE L1 4442 5541 -633 2278 178 8 15 chr18 6461676 6462147 -80215401 + L1MB7 LINE L1 5698 6165 -19 1592 180 58 26 chr18 6462299 6462643 -80214905 + MLT1A2 LTR MaLR 1 355 -19 * 1632 203 19 32 chr18 6462618 6462988 -80214560 - MLT1A2 LTR MaLR -6 368 4 233 234 31 31 chr18 6462988 6463030 -80214518 + MLT1A1 LTR MaLR 313 354 -11 2482 64 0 0 chr18 6463192 6463489 -80214059 + AluY SINE Alu 1 297 -14 361 370 42 2 chr18 6463694 6463872 -80213676 + MLT1G1 LTR MaLR 5 165 -430 777 176 7 0 chr18 6463902 6464038 -80213510 - L1PB4 LINE L1 -18 6138 6002 29 28 0 0 chr18 6464411 6464447 -80213101 + AT_rich Low_complexity Low_complexity 1 36 0 288 360 32 24 chr18 6464865 6464990 -80212558 - L2 LINE L2 -7 3265 3140 21 0 0 0 chr18 6465114 6465135 -80212413 + AT_rich Low_complexity Low_complexity 1 21 0 262 273 13 26 chr18 6465214 6465291 -80212257 + MER5B DNA MER1_type 100 175 -3 428 288 73 46 chr18 6465302 6465521 -80212027 - L3 LINE CR1 -90 1487 1263 813 190 0 0 chr18 6465689 6465868 -80211680 + (CTA)n Simple_repeat Simple_repeat 1 179 0 217 352 136 8 chr18 6465995 6466231 -80211317 + L2 LINE L2 2424 2689 -625 5682 197 45 22 chr18 6466236 6466863 -80210685 - L1MC1 LINE L1 0 6333 5722 2089 88 0 7 chr18 6466863 6467169 -80210379 - AluSg1 SINE Alu 0 304 1 5682 197 45 22 chr18 6467169 6468844 -80208704 - L1MC1 LINE L1 -611 5722 3976 1705 139 11 75 chr18 6468844 6469211 -80208337 - MER4A LTR ERV1 0 664 263 626 104 10 10 chr18 6469211 6469307 -80208241 - MER4A LTR ERV1 -566 98 3 2275 216 15 11 chr18 6469310 6469843 -80207705 - L1MC1 LINE L1 -2168 3978 3444 248 378 122 20 chr18 6469851 6470105 -80207443 + L2 LINE L2 2698 2977 -337 371 315 54 27 chr18 6470226 6470375 -80207173 + L2 LINE L2 3159 3311 -2 225 178 0 0 chr18 6471818 6471863 -80205685 + (TATG)n Simple_repeat Simple_repeat 2 46 0 21 0 0 0 chr18 6472585 6472606 -80204942 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr18 6472669 6472694 -80204854 + AT_rich Low_complexity Low_complexity 1 25 0 227 196 71 80 chr18 6473612 6473724 -80203824 - L1MC4 LINE L1 -14 8028 7918 1362 292 96 33 chr18 6473781 6474566 -80202982 - L1MC4 LINE L1 -130 7912 7079 277 323 16 47 chr18 6475280 6475407 -80202141 + L2 LINE L2 1598 1720 -1594 611 242 8 0 chr18 6476088 6476216 -80201332 + MER3 DNA MER1_type 2 130 -79 1844 83 0 12 chr18 6476218 6476470 -80201078 + L1M1 LINE L1 5527 5775 -527 468 172 43 11 chr18 6476517 6476610 -80200938 + MER3 DNA MER1_type 112 207 -2 180 0 0 0 chr18 6476813 6476833 -80200715 + (TTTTTA)n Simple_repeat Simple_repeat 4 23 0 1831 96 18 105 chr18 6476838 6477181 -80200367 - AluSq SINE Alu 0 313 1 673 115 0 0 chr18 6477443 6477539 -80200009 - MLT1B LTR MaLR 0 390 295 512 259 36 57 chr18 6479755 6479948 -80197600 + MIR SINE MIR 70 258 -4 1107 280 51 23 chr18 6480490 6481028 -80196520 - L2 LINE L2 -88 3225 2667 204 40 0 0 chr18 6481557 6481582 -80195966 + (TA)n Simple_repeat Simple_repeat 1 25 0 185 91 0 30 chr18 6481587 6481620 -80195928 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 434 290 92 60 chr18 6481890 6482107 -80195441 + MIR SINE MIR 32 255 -7 260 319 43 21 chr18 6482677 6482771 -80194777 + MIR3 SINE MIR 92 187 -21 2204 145 3 17 chr18 6483002 6483354 -80194194 - MER7A DNA MER2_type 0 346 2 12953 193 30 18 chr18 6484897 6485730 -80191818 + L1PB4 LINE L1 2130 2951 -3205 2073 114 0 0 chr18 6485730 6486001 -80191547 + AluSg SINE Alu 22 292 -18 12953 193 30 18 chr18 6486001 6486240 -80191308 + L1PB4 LINE L1 2951 3186 -2970 1452 173 148 12 chr18 6486240 6486570 -80190978 - THE1C LTR MaLR 0 375 1 9066 141 17 36 chr18 6486572 6488178 -80189370 - THE1C-int LTR MaLR -2 1578 4 1506 173 143 24 chr18 6488181 6488516 -80189032 - THE1C LTR MaLR 0 375 1 12953 193 30 18 chr18 6488516 6491413 -80186135 + L1PB4 LINE L1 3187 6156 0 361 370 42 2 chr18 6491420 6491598 -80185950 - MLT1G1 LTR MaLR -430 165 5 2495 57 0 0 chr18 6491803 6492099 -80185449 - AluY SINE Alu -15 296 1 234 254 0 0 chr18 6492738 6492809 -80184739 + (TTATA)n Simple_repeat Simple_repeat 1 71 0 364 213 138 0 chr18 6493350 6493444 -80184104 - L2 LINE L2 -1 3312 3206 705 221 0 0 chr18 6493476 6493603 -80183945 - FLAM_A SINE Alu -6 127 1 23 33 0 0 chr18 6495768 6495798 -80181750 + AT_rich Low_complexity Low_complexity 1 30 0 693 210 44 17 chr18 6497318 6497499 -80180049 + MLT1F1 LTR MaLR 1 186 -381 2543 95 3 5 chr18 6497543 6497911 -80179637 - L1PB1 LINE L1 -3 6148 5782 324 279 23 0 chr18 6497911 6497997 -80179551 - L1MC4 LINE L1 -1340 6702 6615 3022 105 13 6 chr18 6497997 6498472 -80179076 - L1P5 LINE L1 -360 5791 5314 * 36670 79 17 6 chr18 6498464 6504540 -80173008 - L1PA5 LINE L1 -5 6149 5 8807 209 11 27 chr18 6504539 6506862 -80170686 - L1 LINE L1 -815 6047 3762 * 4962 69 143 4 chr18 6506865 6507550 -80169998 - LTR17 LTR ERV1 0 780 1 2262 55 3 0 chr18 6507550 6507841 -80169707 - HERV17 LTR ERV1 0 8626 8335 34536 51 1 0 chr18 6507863 6512200 -80165348 - HERV17 LTR ERV1 -2607 6019 1679 13466 63 12 26 chr18 6512197 6512604 -80164944 - HERV17 LTR ERV1 -6762 1864 1453 * 15649 52 6 1 chr18 6512604 6515361 -80162187 - L1PA5 LINE L1 0 6154 3386 13466 63 12 26 chr18 6515361 6516844 -80160704 - HERV17 LTR ERV1 -7173 1453 1 5728 64 52 13 chr18 6516844 6517595 -80159953 - LTR17 LTR ERV1 0 780 1 8688 156 33 1 chr18 6517599 6519971 -80157577 - L1PBa LINE L1 -3104 3758 1311 378 143 0 0 chr18 6519977 6520040 -80157508 - L1PBa LINE L1 -5708 1155 1093 3636 224 58 5 chr18 6520043 6521032 -80156516 - L1PBa LINE L1 -5817 1046 6 759 262 19 9 chr18 6521083 6521293 -80156255 + MLT1F1 LTR MaLR 333 544 -23 1358 214 103 75 chr18 6521904 6522409 -80155139 + MLT2B1 LTR ERVL 1 519 -1 1532 224 67 0 chr18 6526129 6526473 -80151075 - MLT1H LTR MaLR -182 367 1 1143 126 11 0 chr18 6526586 6526760 -80150788 - L1PA15 LINE L1 -6 6159 5984 9786 192 21 5 chr18 6526763 6529283 -80148265 - L1PA15 LINE L1 -567 5598 3037 2203 80 7 0 chr18 6529285 6529560 -80147988 - AluSg SINE Alu -13 297 21 499 295 37 29 chr18 6530069 6530310 -80147238 + MLT1K LTR MaLR 330 572 -16 182 339 0 0 chr18 6531437 6531496 -80146052 + L2 LINE L2 3201 3259 -13 190 327 150 45 chr18 6532409 6532629 -80144919 + MIR SINE MIR 20 262 0 1775 253 73 29 chr18 6532881 6533664 -80143884 - L1MC4 LINE L1 -183 7859 7043 1038 320 109 46 chr18 6534313 6535480 -80142068 - L1MEc LINE L1 -4893 1417 52 7048 57 13 0 chr18 6535480 6536518 -80141030 - L1PA7 LINE L1 -13 6141 5098 1038 320 109 46 chr18 6536518 6536572 -80140976 - L1MEc LINE L1 -6258 52 3 33 43 0 0 chr18 6536973 6537020 -80140528 + AT_rich Low_complexity Low_complexity 1 47 0 180 412 88 0 chr18 6537223 6537325 -80140223 + L2 LINE L2 3075 3185 -87 326 218 77 13 chr18 6537406 6537484 -80140064 - L2 LINE L2 -20 3293 3211 180 259 62 37 chr18 6537706 6537787 -80139761 + L2 LINE L2 2219 2301 -1013 273 119 0 0 chr18 6539447 6539489 -80138059 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 750 289 146 14 chr18 6540683 6541046 -80136502 - MLT1G1 LTR MaLR -7 588 178 733 296 56 24 chr18 6541061 6541402 -80136146 + L1PA15-16 LINE L1 2 353 -6496 318 235 86 49 chr18 6541407 6541569 -80135979 + L1PA15-16 LINE L1 387 554 -6295 10578 243 38 32 chr18 6541944 6544605 -80132943 + L1M2 LINE L1 781 3425 -3423 2097 114 0 0 chr18 6544605 6544876 -80132672 + AluSg SINE Alu 22 292 -18 10578 243 38 32 chr18 6544876 6545115 -80132433 + L1M2 LINE L1 3425 3661 -3187 1473 173 148 12 chr18 6545115 6545445 -80132103 - THE1C LTR MaLR 0 375 1 9174 141 17 36 chr18 6545447 6547053 -80130495 - THE1C-int LTR MaLR -2 1578 4 1522 173 143 24 chr18 6547056 6547391 -80130157 - THE1C LTR MaLR 0 375 1 10578 243 38 32 chr18 6547391 6549021 -80128527 + L1M2 LINE L1 3662 5583 -1265 4268 141 35 19 chr18 6549132 6549903 -80127645 - L1MC2 LINE L1 -145 6199 5417 1014 160 66 33 chr18 6550262 6550506 -80127042 - L1MA9 LINE L1 -5 6307 6056 1835 106 9 75 chr18 6550811 6551161 -80126387 - AluSx SINE Alu 0 312 1 6135 230 30 21 chr18 6551165 6554665 -80122883 - L1PA13 LINE L1 -3113 3684 1 285 285 51 6 chr18 6554674 6554832 -80122716 - L1MEd LINE L1 -5050 1069 905 300 321 133 48 chr18 6554929 6555028 -80122520 - L1MEd LINE L1 -5351 768 679 2170 138 0 0 chr18 6555028 6555333 -80122215 - AluSx SINE Alu -7 305 1 300 321 133 48 chr18 6555333 6555548 -80122000 - L1MEd LINE L1 -5440 679 427 9508 255 50 31 chr18 6555663 6558031 -80119517 - L1ME1 LINE L1 -285 6379 4057 2469 70 0 0 chr18 6558031 6558333 -80119215 - AluY SINE Alu -9 302 1 9508 255 50 31 chr18 6558333 6558887 -80118661 - L1ME1 LINE L1 -2607 4057 3515 1862 105 260 9 chr18 6558887 6559229 -80118319 - MSTA LTR MaLR 0 428 1 9508 255 50 31 chr18 6559229 6562540 -80115008 - L1ME1 LINE L1 -3149 3515 16 21 0 0 0 chr18 6563076 6563097 -80114451 + AT_rich Low_complexity Low_complexity 1 21 0 296 294 82 82 chr18 6563501 6563746 -80113802 + MIR SINE MIR 3 247 -15 1560 154 135 3 chr18 6564162 6564481 -80113067 - MER46B DNA MER2_type 0 236 1 246 211 0 19 chr18 6564435 6564487 -80113061 + MER46A DNA MER2_type 100 150 -86 * 22 35 0 0 chr18 6564813 6564842 -80112706 + AT_rich Low_complexity Low_complexity 1 29 0 184 225 0 0 chr18 6565022 6565062 -80112486 + L3b LINE CR1 1427 1466 -117 334 290 28 0 chr18 6565558 6565665 -80111883 + (TATATG)n Simple_repeat Simple_repeat 4 113 0 234 303 53 53 chr18 6566247 6566399 -80111149 - MIR SINE MIR 0 262 111 180 0 0 0 chr18 6566645 6566665 -80110883 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 841 148 0 0 chr18 6566671 6566793 -80110755 - FLAM_C SINE Alu -11 122 1 330 26 0 0 chr18 6567173 6567212 -80110336 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 1900 216 72 7 chr18 6567319 6568130 -80109418 - L1M4 LINE L1 -414 5770 4899 1317 131 5 5 chr18 6568883 6569089 -80108459 + AluY SINE Alu 102 307 -4 6838 137 18 1 chr18 6569089 6570817 -80106731 + L1MA2 LINE L1 4554 6302 -2 21 0 0 0 chr18 6570817 6570838 -80106710 + AT_rich Low_complexity Low_complexity 1 21 0 420 289 86 7 chr18 6571303 6571455 -80106093 - MIR SINE MIR -98 164 1 438 268 146 91 chr18 6571488 6572159 -80105389 + L1ME4a LINE L1 5414 6121 0 319 302 88 53 chr18 6573011 6573329 -80104219 + L2 LINE L2 1854 2182 -1132 316 270 0 22 chr18 6573476 6573565 -80103983 + MIR SINE MIR 49 135 -127 291 357 36 46 chr18 6574725 6574921 -80102627 + L2 LINE L2 2891 3084 -188 227 323 50 10 chr18 6575038 6575137 -80102411 + L2 LINE L2 3145 3247 -25 537 279 36 89 chr18 6576063 6576315 -80101233 + MIR SINE MIR 16 262 0 1498 251 53 31 chr18 6576445 6576859 -80100689 + MLT2F LTR ERVL 186 608 -55 237 73 24 24 chr18 6576920 6576961 -80100587 + MLT2D LTR ERVL 374 414 0 240 35 0 0 chr18 6577195 6577224 -80100324 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 307 256 51 26 chr18 6578215 6578332 -80099216 - MER112 DNA MER1_type -43 217 98 597 178 142 138 chr18 6578561 6578836 -80098712 - MLT1C LTR MaLR 0 467 192 2556 195 99 39 chr18 6578866 6578939 -80098609 - MLT1C-int LTR MaLR -663 708 641 2411 94 0 0 chr18 6578939 6579248 -80098300 - AluY SINE Alu -2 309 1 2556 195 99 39 chr18 6579248 6579841 -80097707 - MLT1C-int LTR MaLR -730 641 2 913 220 43 123 chr18 6579842 6580264 -80097284 - MLT1C LTR MaLR 0 390 3 180 125 0 0 chr18 6580488 6580520 -80097028 + (AATTG)n Simple_repeat Simple_repeat 3 34 0 185 326 81 0 chr18 6580809 6580895 -80096653 - L2 LINE L2 -13 3300 3208 * 1678 290 106 17 chr18 6580865 6581507 -80096041 - L2 LINE L2 -704 2610 1912 595 324 111 44 chr18 6581541 6582247 -80095301 + L1M4 LINE L1 3187 3939 -2207 462 300 186 22 chr18 6582285 6582698 -80094850 + L1MB3 LINE L1 3759 4239 -1907 300 288 89 0 chr18 6582825 6582971 -80094577 + L1MB3 LINE L1 4365 4523 -1623 2214 98 0 46 chr18 6583134 6583258 -80094290 + AluSx SINE Alu 1 129 -183 259 44 44 0 chr18 6583258 6583303 -80094245 + (TAA)n Simple_repeat Simple_repeat 2 48 0 2214 98 0 46 chr18 6583303 6583503 -80094045 + AluSx SINE Alu 129 310 -2 851 23 53 40 chr18 6584578 6584878 -80092670 + (CCA)n Simple_repeat Simple_repeat 3 481 0 1111 169 310 9 chr18 6585080 6585406 -80092142 + LTR48 LTR ERV1 1 424 -363 580 174 42 54 chr18 6585444 6585649 -80091899 + MER39 LTR ERV1 582 705 -2 17473 29 0 0 chr18 6585686 6587792 -80089756 + L1P LINE L1 2237 4342 -1804 2597 201 16 30 chr18 6587856 6588613 -80088935 + L1MB3 LINE L1 5037 5778 -405 1804 173 27 25 chr18 6588649 6589053 -80088495 + L1MB3 LINE L1 5771 6175 -8 30 59 0 0 chr18 6589293 6589344 -80088204 + AT_rich Low_complexity Low_complexity 1 51 0 260 253 74 0 chr18 6589675 6589770 -80087778 - L1ME LINE L1 -343 5778 5677 278 96 0 19 chr18 6589819 6589871 -80087677 + (TA)n Simple_repeat Simple_repeat 1 51 0 2105 87 3 11 chr18 6589871 6590157 -80087391 - AluSg SINE Alu -26 284 1 245 286 0 12 chr18 6590232 6590316 -80087232 - L1ME LINE L1 -476 5645 5563 234 353 147 10 chr18 6590866 6591070 -80086478 + L2 LINE L2 2731 2962 -352 217 271 49 82 chr18 6591401 6591523 -80086025 + MIR SINE MIR 63 180 -82 354 23 0 0 chr18 6592253 6592296 -80085252 + (TG)n Simple_repeat Simple_repeat 2 44 0 215 303 66 0 chr18 6593302 6593378 -80084170 + L2 LINE L2 3232 3312 -1 938 202 91 15 chr18 6593853 6594051 -80083497 - MER20 DNA MER1_type 0 219 7 182 244 24 0 chr18 6595392 6595433 -80082115 - MIR3 SINE MIR -38 170 129 1748 202 19 22 chr18 6595615 6595977 -80081571 - MLT1A2 LTR MaLR -13 361 1 437 235 0 31 chr18 6597611 6597709 -80079839 - L2 LINE L2 0 3313 3219 460 228 161 62 chr18 6597840 6598033 -80079515 + MIR SINE MIR 37 248 -14 328 323 31 0 chr18 6598060 6598187 -80079361 + MER117 DNA MER1_type 67 197 0 346 323 31 0 chr18 6598192 6598288 -80079260 - MIR SINE MIR -60 148 50 485 113 0 12 chr18 6599338 6599418 -80078130 - MADE1 DNA Mariner -1 79 1 432 269 133 9 chr18 6599993 6600206 -80077342 - L1ME3A LINE L1 0 6170 5933 2547 215 49 32 chr18 6600284 6601130 -80076418 - L1ME1 LINE L1 -198 6037 5189 32 26 0 0 chr18 6601134 6601173 -80076375 + AT_rich Low_complexity Low_complexity 1 39 0 4951 172 57 36 chr18 6601189 6602489 -80075059 - L1MA4 LINE L1 -6 6294 4980 723 238 115 2 chr18 6602487 6602878 -80074670 - L1ME1 LINE L1 -3623 2592 2189 * 1350 263 111 10 chr18 6602875 6603579 -80073969 - L1ME1 LINE L1 -4929 1467 693 268 243 68 27 chr18 6603580 6603654 -80073894 - MER58B DNA MER1_type 0 341 265 347 257 0 0 chr18 6603714 6603788 -80073760 - MER58B DNA MER1_type -248 93 20 1606 260 86 45 chr18 6603800 6604426 -80073122 - L1ME1 LINE L1 -5708 688 37 241 155 42 14 chr18 6606201 6606272 -80071276 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 714 185 0 87 chr18 6606394 6606567 -80070981 - MER58C DNA MER1_type -1 214 57 338 243 100 57 chr18 6607816 6607956 -80069592 - L2 LINE L2 -16 3297 3152 2847 144 128 9 chr18 6607964 6608497 -80069051 - MER6A DNA MER2_type -9 596 1 205 274 0 0 chr18 6608550 6608601 -80068947 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 221 395 33 9 chr18 6608677 6608892 -80068656 + L2 LINE L2 2340 2559 -755 369 289 111 11 chr18 6609973 6610153 -80067395 + L1M4 LINE L1 4055 4252 -1894 823 278 97 58 chr18 6610218 6610970 -80066578 + L1M4 LINE L1 4458 5238 -908 977 209 0 0 chr18 6611079 6611275 -80066273 + L1PB1 LINE L1 10 205 -6658 * 13976 203 26 13 chr18 6611272 6615616 -80061932 + L1PB1 LINE L1 1227 5515 -1352 2452 82 0 3 chr18 6615616 6615920 -80061628 - AluSg SINE Alu -7 303 1 13976 203 26 13 chr18 6615920 6616729 -80060819 + L1PB1 LINE L1 5515 6507 -360 428 34 0 17 chr18 6616729 6616788 -80060760 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 13976 203 26 13 chr18 6616788 6616852 -80060696 + L1PB1 LINE L1 6507 6569 -298 378 0 0 0 chr18 6617133 6617175 -80060373 + (TG)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr18 6617174 6617196 -80060352 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 863 145 0 0 chr18 6617212 6617343 -80060205 + FLAM_C SINE Alu 1 131 -2 193 309 175 37 chr18 6618400 6618617 -80058931 - MIR SINE MIR 0 262 16 2014 150 11 40 chr18 6618971 6619318 -80058230 - MER1B DNA MER1_type 0 337 1 263 282 16 65 chr18 6619357 6619481 -80058067 + MIR SINE MIR 79 196 -66 7363 38 8 0 chr18 6619750 6621166 -80056382 + L1PA5 LINE L1 4725 6149 -5 2230 109 0 0 chr18 6621543 6621837 -80055711 + AluSx SINE Alu 1 294 -18 13774 143 35 9 chr18 6622212 6624568 -80052980 + Tigger1 DNA MER2_type 1 2418 0 593 311 90 7 chr18 6624639 6624928 -80052620 + L3 LINE CR1 595 907 -670 275 266 73 37 chr18 6625343 6625452 -80052096 + L3 LINE CR1 1203 1315 -262 297 333 34 17 chr18 6625508 6625625 -80051923 - L2 LINE L2 -24 3289 3171 239 309 163 8 chr18 6625857 6625980 -80051568 - L2 LINE L2 -537 2777 2636 368 267 10 50 chr18 6626048 6626149 -80051399 + L3 LINE CR1 1417 1513 -64 404 225 89 94 chr18 6626547 6626760 -80050788 - HAL1 LINE L1 0 2507 2296 550 320 69 50 chr18 6626995 6627298 -80050250 + MLT1J LTR MaLR 72 380 -131 181 236 139 28 chr18 6627965 6628037 -80049511 + L3b LINE CR1 1358 1437 -146 25 31 0 0 chr18 6628807 6628839 -80048709 + AT_rich Low_complexity Low_complexity 1 32 0 1442 130 27 19 chr18 6628859 6629121 -80048427 - L1MA4 LINE L1 -52 6248 5985 * 1732 135 28 7 chr18 6629115 6629404 -80048144 + L1MA4 LINE L1 5683 5977 -323 3785 198 28 26 chr18 6630499 6631383 -80046165 - L1MB8 LINE L1 0 6178 5293 430 325 25 39 chr18 6632192 6632395 -80045153 + L2 LINE L2 2693 2892 -422 2147 135 0 0 chr18 6633029 6633341 -80044207 + AluSx SINE Alu 1 312 0 261 57 0 0 chr18 6633447 6633482 -80044066 + (TA)n Simple_repeat Simple_repeat 1 35 0 2128 111 0 0 chr18 6633483 6633771 -80043777 - AluSc SINE Alu -21 288 1 305 138 0 17 chr18 6634883 6634941 -80042607 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 543 271 14 0 chr18 6636388 6636528 -80041020 - MER103 DNA DNA -22 144 3 921 245 34 73 chr18 6637342 6637755 -80039793 - MLT2C1 LTR ERVL 0 397 1 243 0 0 0 chr18 6637843 6637870 -80039678 + (CA)n Simple_repeat Simple_repeat 2 28 0 664 333 45 17 chr18 6638165 6638453 -80039095 - MLT1J LTR MaLR -215 296 1 204 97 0 0 chr18 6638852 6638883 -80038665 + (TG)n Simple_repeat Simple_repeat 2 32 0 709 204 20 43 chr18 6639884 6640176 -80037372 + L1ME1 LINE L1 26 6462 -122 286 281 35 44 chr18 6640177 6640291 -80037257 - MER81 DNA DNA 0 114 2 443 279 49 27 chr18 6640294 6640477 -80037071 + L1MC3 LINE L1 6042 6228 -1557 264 299 15 0 chr18 6640612 6640679 -80036869 - MER91B DNA MER1_type -122 68 1 186 304 18 0 chr18 6640704 6640760 -80036788 + MIR3 SINE MIR 111 167 -41 462 386 33 14 chr18 6640773 6640988 -80036560 + MIR SINE MIR 17 235 -27 2246 107 3 0 chr18 6641409 6641707 -80035841 + AluSp SINE Alu 1 299 -14 2303 201 20 16 chr18 6641835 6642381 -80035167 + L1M4 LINE L1 4782 5329 -817 388 369 36 10 chr18 6642427 6642622 -80034926 - L3 LINE CR1 -3 1574 1375 2112 156 22 66 chr18 6642627 6643316 -80034232 + L1MB8 LINE L1 5337 6172 -6 434 373 76 8 chr18 6643930 6644193 -80033355 - L3 LINE CR1 -3 1574 1294 2307 103 0 3 chr18 6644851 6645162 -80032386 - AluY SINE Alu -1 310 1 476 343 82 60 chr18 6645172 6645344 -80032204 - L3 LINE CR1 -731 846 679 2231 101 0 3 chr18 6645344 6645641 -80031907 - AluSq SINE Alu -17 296 1 476 343 82 60 chr18 6645641 6646005 -80031543 - L3 LINE CR1 -898 679 298 2298 76 7 0 chr18 6646012 6646300 -80031248 - AluSg SINE Alu 0 310 21 571 295 37 29 chr18 6646808 6647049 -80030499 + MLT1K LTR MaLR 330 572 -16 198 356 50 20 chr18 6648133 6648234 -80029314 + L2 LINE L2 3156 3259 -13 202 327 150 45 chr18 6649147 6649367 -80028181 + MIR SINE MIR 20 262 0 1985 253 72 28 chr18 6649619 6650402 -80027146 - L1MC4 LINE L1 -183 7859 7043 188 107 36 36 chr18 6651057 6651113 -80026435 + (CACAC)n Simple_repeat Simple_repeat 3 58 0 2094 109 0 0 chr18 6651584 6651900 -80025648 - AluSq SINE Alu 0 316 1 23 0 0 0 chr18 6652066 6652089 -80025459 + GC_rich Low_complexity Low_complexity 1 23 0 309 344 42 24 chr18 6652843 6653055 -80024493 + L1MC/D LINE L1 4943 5158 -988 240 141 109 0 chr18 6653103 6653167 -80024381 + L1MC/D LINE L1 5297 5367 -2441 309 245 11 43 chr18 6653189 6653283 -80024265 - L1MC4 LINE L1 -1339 6703 6613 371 205 0 0 chr18 6653288 6653366 -80024182 + L1MC/D LINE L1 5396 5473 -2335 848 238 12 28 chr18 6653558 6653810 -80023738 + L1M4 LINE L1 4915 5162 -984 2078 95 0 18 chr18 6653927 6654250 -80023298 + AluSc SINE Alu 1 318 0 7864 208 16 33 chr18 6654697 6655620 -80021928 - L1 LINE L1 -1607 5601 4664 637 242 8 0 chr18 6655620 6655752 -80021796 + FLAM_A SINE Alu 1 133 0 7864 208 16 33 chr18 6655752 6656823 -80020725 - L1 LINE L1 -2544 4664 3640 1962 132 35 59 chr18 6656824 6657165 -80020383 - MER1B DNA MER1_type 0 339 7 6160 208 39 14 chr18 6657170 6657508 -80020040 - L1 LINE L1 -3562 3646 3318 1890 145 151 5 chr18 6657508 6657880 -80019668 + MSTA LTR MaLR 3 428 0 6160 208 39 14 chr18 6657880 6659432 -80018116 - L1 LINE L1 -3890 3318 1710 283 223 157 58 chr18 6659485 6659606 -80017942 + MLT1H1 LTR MaLR 423 555 0 612 331 33 4 chr18 6659714 6659960 -80017588 - L1 LINE L1 -5540 1669 1401 23 33 0 0 chr18 6660306 6660336 -80017212 + AT_rich Low_complexity Low_complexity 1 30 0 228 328 0 0 chr18 6660670 6660737 -80016811 - MER113 DNA MER1_type? 0 521 455 516 274 70 117 chr18 6660775 6661361 -80016187 + MLT1H1 LTR MaLR 1 555 0 33 0 0 0 chr18 6662153 6662186 -80015362 + AT_rich Low_complexity Low_complexity 1 33 0 625 272 98 13 chr18 6662817 6663052 -80014496 + MLT1H1 LTR MaLR 290 544 -11 2298 92 0 0 chr18 6663170 6663473 -80014075 - AluY SINE Alu -8 303 1 23 0 0 0 chr18 6663668 6663691 -80013857 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr18 6664316 6664345 -80013203 + AT_rich Low_complexity Low_complexity 1 29 0 661 300 133 33 chr18 6665013 6665313 -80012235 - MLT1I LTR MaLR 0 409 80 337 182 34 0 chr18 6665959 6666047 -80011501 - MER113 DNA MER1_type? -302 219 129 9574 191 67 42 chr18 6666720 6666786 -80010762 + L1MC3 LINE L1 5377 5440 -2345 1884 122 78 0 chr18 6666786 6667057 -80010491 + AluSx SINE Alu 1 292 -20 9574 191 67 42 chr18 6667057 6668901 -80008647 + L1MC3 LINE L1 5440 7359 -426 2020 100 97 29 chr18 6668901 6669242 -80008306 - THE1B LTR MaLR 0 364 1 9574 191 67 42 chr18 6669242 6669680 -80007868 + L1MC3 LINE L1 7359 7785 0 206 257 71 53 chr18 6669950 6670063 -80007485 + MER5A DNA MER1_type 7 121 -68 280 340 103 32 chr18 6670913 6671069 -80006479 + L3 LINE CR1 1315 1481 -96 2065 120 0 0 chr18 6671104 6671388 -80006160 + AluSx SINE Alu 1 284 -28 243 0 0 0 chr18 6671388 6671415 -80006133 + (CAAT)n Simple_repeat Simple_repeat 2 28 0 559 286 147 37 chr18 6671589 6672009 -80005539 - MLT1F LTR MaLR -15 527 94 334 246 249 48 chr18 6672419 6672509 -80005039 + L1ME4a LINE L1 5569 5640 -481 258 81 0 0 chr18 6672509 6672546 -80005002 + (TA)n Simple_repeat Simple_repeat 2 38 0 334 246 249 48 chr18 6672546 6672748 -80004800 + L1ME4a LINE L1 5640 5920 -201 4333 180 27 27 chr18 6673117 6674291 -80003257 - L1MB7 LINE L1 -19 6165 4995 30 45 0 0 chr18 6674745 6674789 -80002759 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr18 6675915 6675945 -80001603 + AT_rich Low_complexity Low_complexity 1 30 0 180 333 74 43 chr18 6676594 6676756 -80000792 + L2 LINE L2 2286 2452 -862 208 406 26 45 chr18 6677136 6677291 -80000257 + L2 LINE L2 3112 3263 -9 359 273 16 50 chr18 6677380 6677501 -80000047 - L2 LINE L2 0 3313 3197 1282 138 0 23 chr18 6677700 6677917 -79999631 + L1PA16 LINE L1 5955 6166 0 2739 221 70 102 chr18 6677917 6678678 -79998870 + L1ME3 LINE L1 3982 4766 -1568 2337 60 0 0 chr18 6678678 6678982 -79998566 + AluY SINE Alu 1 304 0 1411 77 6 0 chr18 6678982 6679163 -79998385 + AluSp SINE Alu 126 307 -6 2739 221 70 102 chr18 6679163 6680373 -79997175 + L1ME3 LINE L1 4764 6254 -80 321 272 0 11 chr18 6680373 6680465 -79997083 + (TA)n Simple_repeat Simple_repeat 2 92 0 544 309 69 5 chr18 6680895 6681083 -79996465 + MIR SINE MIR 19 218 -44 511 270 128 10 chr18 6681259 6681463 -79996085 - MLT1J1 LTR MaLR -218 228 1 222 105 0 0 chr18 6683033 6683071 -79994477 + (A)n Simple_repeat Simple_repeat 1 38 0 1603 148 16 63 chr18 6683591 6683894 -79993654 - AluJo SINE Alu -23 289 1 346 311 19 0 chr18 6683987 6684090 -79993458 - MER5C DNA MER1_type -200 124 20 541 283 28 0 chr18 6684715 6684892 -79992656 + L2 LINE L2 1127 1308 -2006 1417 260 45 24 chr18 6685305 6685383 -79992165 + L1ME1 LINE L1 1359 1434 -4753 2325 109 7 0 chr18 6685383 6685687 -79991861 + AluSx SINE Alu 1 306 -6 1417 260 45 24 chr18 6685687 6686331 -79991217 + L1ME1 LINE L1 1434 5444 -743 36267 32 0 0 chr18 6686349 6691528 -79986020 - L1PA2 LINE L1 -2 6153 975 6003 51 4 10 chr18 6691533 6692381 -79985167 + L1PA2 LINE L1 3 974 -5172 1798 278 79 11 chr18 6692371 6693029 -79984519 + L1ME1 LINE L1 5446 6148 -18 * 255 114 0 0 chr18 6693216 6693260 -79984288 + (GA)n Simple_repeat Simple_repeat 1 44 0 241 302 11 88 chr18 6693300 6693388 -79984160 + HAL1 LINE L1 1578 1646 -861 1955 122 30 14 chr18 6693388 6693684 -79983864 - AluSq SINE Alu -7 306 6 241 302 11 88 chr18 6693684 6693777 -79983771 + HAL1 LINE L1 1646 1745 -762 237 241 9 65 chr18 6694332 6694440 -79983108 + HAL1b LINE L1 746 847 -501 1966 128 0 24 chr18 6694477 6694773 -79982775 + AluSg SINE Alu 1 289 -21 355 292 104 26 chr18 6694973 6695165 -79982383 + HAL1 LINE L1 2301 2507 0 861 339 117 56 chr18 6695815 6696905 -79980643 + L3 LINE CR1 73 1229 -348 186 361 115 0 chr18 6697796 6697926 -79979622 + L2 LINE L2 2358 2502 -812 1686 216 139 11 chr18 6698923 6699363 -79978185 - MLT1D LTR MaLR 0 505 10 324 250 78 9 chr18 6699970 6700086 -79977462 + LTR67 LTR ERVL 412 535 -22 26 0 0 0 chr18 6700727 6700753 -79976795 + AT_rich Low_complexity Low_complexity 1 26 0 1404 141 0 12 chr18 6702144 6702385 -79975163 + L1MA6 LINE L1 6059 6296 -4 701 343 93 38 chr18 6703179 6703782 -79973766 - L2 LINE L2 -493 2821 2186 26 30 0 0 chr18 6704969 6705002 -79972546 + AT_rich Low_complexity Low_complexity 1 33 0 340 344 62 0 chr18 6705245 6705405 -79972143 - L1ME4a LINE L1 -175 5946 5777 212 211 19 0 chr18 6705405 6705457 -79972091 + (TA)n Simple_repeat Simple_repeat 2 54 0 312 272 71 107 chr18 6705472 6705621 -79971927 - L1ME4a LINE L1 -360 5761 5627 2024 140 0 16 chr18 6705621 6705936 -79971612 + AluSx SINE Alu 1 310 -2 312 272 71 107 chr18 6705936 6706095 -79971453 - L1ME4a LINE L1 -494 5627 5464 1181 235 90 59 chr18 6706101 6706591 -79970957 + MLT1D LTR MaLR 1 505 0 272 333 97 53 chr18 6706838 6707159 -79970389 - L2 LINE L2 -931 2383 2049 1798 232 37 37 chr18 6707194 6708272 -79969276 - L1MCc LINE L1 -3403 3538 2384 1213 66 30 12 chr18 6708277 6708443 -79969105 + THE1B LTR MaLR 1 169 -195 477 151 0 0 chr18 6708445 6708518 -79969030 + THE1B LTR MaLR 292 364 0 1834 255 47 49 chr18 6708579 6709863 -79967685 - L1MCc LINE L1 -4846 2095 807 1404 156 137 35 chr18 6710159 6710594 -79966954 - Charlie1b DNA MER1_type 0 523 40 242 291 13 0 chr18 6710780 6710859 -79966689 - MIR SINE MIR -182 80 1 495 234 62 8 chr18 6711841 6711969 -79965579 - MIR SINE MIR -79 183 49 234 182 0 0 chr18 6712565 6712620 -79964928 + L1MC4 LINE L1 6652 6706 -1336 303 362 24 8 chr18 6712689 6712816 -79964732 - MIR SINE MIR -112 150 22 2086 117 7 7 chr18 6712898 6713197 -79964351 - AluSx SINE Alu -13 299 1 246 301 188 11 chr18 6713447 6713633 -79963915 - MIR SINE MIR -15 247 29 752 267 36 36 chr18 6713745 6714026 -79963522 - L1ME3A LINE L1 -9 6161 5881 365 332 106 9 chr18 6714031 6714248 -79963300 - LTR16A LTR ERVL -6 444 207 1122 336 96 15 chr18 6714664 6715473 -79962075 - HERV16 LTR ERVL -3631 1365 491 868 192 9 103 chr18 6816093 6816317 -79861231 + MER58A DNA MER1_type 19 221 -3 352 333 39 5 chr18 6816318 6816522 -79861026 - LTR33 LTR ERVL -13 508 298 499 189 9 9 chr18 6816573 6816679 -79860869 - MLT1A2 LTR MaLR 0 374 269 2098 101 3 24 chr18 6816823 6817120 -79860428 + AluSq SINE Alu 9 299 -14 25 0 0 0 chr18 6817258 6817283 -79860265 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr18 6817593 6817616 -79859932 + AT_rich Low_complexity Low_complexity 1 23 0 772 239 0 12 chr18 6817692 6817859 -79859689 + FRAM SINE Alu 1 165 -11 691 205 0 0 chr18 6817985 6818112 -79859436 + FLAM_A SINE Alu 11 137 -5 571 340 30 53 chr18 6818589 6818939 -79858609 - HERV16 LTR ERVL -2039 2957 2600 5167 93 81 18 chr18 6818939 6819716 -79857832 - LTR12 LTR ERV1 0 826 1 571 340 30 53 chr18 6819716 6819913 -79857635 - HERV16 LTR ERVL -2396 2600 2970 2233 80 0 13 chr18 6819913 6820212 -79857336 + AluY SINE Alu 1 295 -16 571 340 30 53 chr18 6820212 6820382 -79857166 - HERV16 LTR ERVL -2025 2971 2799 289 194 15 0 chr18 6821635 6821702 -79855846 + LTR60 LTR ERV1 1 68 -518 1441 210 30 30 chr18 6821748 6822114 -79855434 + LTR43 LTR ERV1 96 461 -141 518 259 38 57 chr18 6822695 6822907 -79854641 - LTR41 LTR ERVL -10 763 556 453 192 179 32 chr18 6823482 6823638 -79853910 - LTR41 LTR ERVL -594 179 1 2343 97 0 0 chr18 6823663 6823961 -79853587 + AluSx SINE Alu 1 298 -14 33 25 0 0 chr18 6825532 6825572 -79851976 + AT_rich Low_complexity Low_complexity 1 40 0 1680 206 58 12 chr18 6826324 6826741 -79850807 + MER63B DNA MER1_type 1 436 0 1288 271 132 26 chr18 6826810 6827508 -79850040 + L1MC4a LINE L1 5461 6232 -1576 1342 190 15 114 chr18 6827665 6828070 -79849478 + MLT1A1 LTR MaLR 1 365 0 2375 61 0 0 chr18 6828169 6828466 -79849082 + AluY SINE Alu 1 297 -14 889 124 0 0 chr18 6830082 6830211 -79847337 + FLAM_C SINE Alu 3 131 -2 21 0 0 0 chr18 6830211 6830232 -79847316 + AT_rich Low_complexity Low_complexity 1 21 0 2922 236 123 29 chr18 6830357 6830682 -79846866 - L1MC4 LINE L1 -2 8040 7747 2493 171 49 31 chr18 6830682 6830727 -79846821 - MLT2B1 LTR ERVL 0 520 477 402 21 0 0 chr18 6830727 6830774 -79846774 + (CA)n Simple_repeat Simple_repeat 2 48 0 2493 171 49 31 chr18 6830774 6831237 -79846311 - MLT2B1 LTR ERVL -43 477 3 2922 236 123 29 chr18 6831237 6832070 -79845478 - L1MC4 LINE L1 -295 7747 6773 2658 145 12 1 chr18 6832287 6833063 -79844485 - L1M2 LINE L1 -568 5723 4937 2548 122 46 46 chr18 6833064 6833563 -79843985 + L1MA7 LINE L1 5791 6289 -2 3397 203 20 44 chr18 6833702 6834628 -79842920 - L1MB5 LINE L1 -251 5923 5063 3397 154 3 10 chr18 6834628 6835217 -79842331 + L1PA16 LINE L1 5576 6160 -6 3397 203 20 44 chr18 6835217 6835939 -79841609 - L1MB5 LINE L1 -1111 5063 4325 314 303 131 5 chr18 6835940 6836138 -79841410 - MIR SINE MIR -6 256 34 262 314 16 8 chr18 6836214 6836338 -79841210 + L2 LINE L2 2926 3050 -222 1460 241 63 72 chr18 6836501 6837194 -79840354 + L1M4 LINE L1 2668 3366 -2780 2452 61 0 3 chr18 6837194 6837505 -79840043 + AluY SINE Alu 1 310 -1 1460 241 63 72 chr18 6837505 6837777 -79839771 + L1M4 LINE L1 3366 3624 -2522 2533 40 0 3 chr18 6837777 6838078 -79839470 - AluY SINE Alu -11 300 1 1460 241 63 72 chr18 6838078 6838219 -79839329 + L1M4 LINE L1 3624 3765 -2381 309 257 30 0 chr18 6838219 6838320 -79839228 - LTR16C LTR ERVL -18 473 370 1140 270 81 54 chr18 6838660 6839142 -79838406 - L2 LINE L2 -940 2374 1880 192 77 0 0 chr18 6839447 6839473 -79838075 + (TA)n Simple_repeat Simple_repeat 2 27 0 182 91 30 0 chr18 6839503 6839536 -79838012 + (TG)n Simple_repeat Simple_repeat 2 35 0 241 118 40 26 chr18 6839543 6839619 -79837929 + (TA)n Simple_repeat Simple_repeat 1 77 0 290 308 104 23 chr18 6840344 6840807 -79836741 - L1M4 LINE L1 -3314 2832 2301 766 142 14 34 chr18 6840807 6840955 -79836593 - L1MA4 LINE L1 0 6300 6156 290 308 104 23 chr18 6840955 6841134 -79836414 - L1M4 LINE L1 -3845 2301 2138 22 56 0 0 chr18 6841601 6841637 -79835911 + AT_rich Low_complexity Low_complexity 1 36 0 445 255 0 11 chr18 6841637 6841731 -79835817 + L2 LINE L2 3185 3277 -36 910 334 74 0 chr18 6841902 6842306 -79835242 + LTR33 LTR ERVL 82 515 -6 481 319 64 0 chr18 6842928 6843085 -79834463 - MIR SINE MIR -79 183 17 219 244 148 0 chr18 6843220 6843335 -79834213 + MIR SINE MIR 130 261 -1 10316 246 36 23 chr18 6844264 6847046 -79830502 + L1PA12 LINE L1 7 2752 -4832 1609 139 104 14 chr18 6847046 6847326 -79830222 + AluSx SINE Alu 1 305 -7 10316 246 36 23 chr18 6847326 6847793 -79829755 + L1PA12 LINE L1 2752 3211 -4373 2237 103 0 16 chr18 6847793 6848105 -79829443 + AluY SINE Alu 1 307 -4 10316 246 36 23 chr18 6848105 6850427 -79827121 + L1PA12 LINE L1 3211 5662 -1922 377 39 20 0 chr18 6850470 6850521 -79827027 + (CA)n Simple_repeat Simple_repeat 1 52 0 1383 214 130 3 chr18 6850620 6850943 -79826605 + MLT1A1 LTR MaLR 2 365 0 973 171 40 5 chr18 6851529 6851751 -79825797 + L1MA8 LINE L1 6056 6285 -6 10287 139 23 4 chr18 6852312 6854073 -79823475 + L1PBa LINE L1 3 1797 -5066 493 209 9 0 chr18 6854071 6854181 -79823367 - L1 LINE L1 -2108 4038 3928 * 550 175 0 0 chr18 6854188 6854285 -79823263 - L1P LINE L1 -1548 4598 4502 257 143 0 0 chr18 6854292 6854334 -79823214 + L1PB1 LINE L1 159 200 -6663 9902 202 33 34 chr18 6854359 6854868 -79822680 + L1PB1 LINE L1 1763 2271 -4596 2100 125 0 28 chr18 6854868 6855187 -79822361 + AluY SINE Alu 1 310 -1 9902 202 33 34 chr18 6855187 6855935 -79821613 + L1PB1 LINE L1 2271 3018 -3849 2140 95 0 14 chr18 6855935 6856247 -79821301 + AluY SINE Alu 1 308 0 9902 202 33 34 chr18 6856247 6858396 -79819152 + L1PB1 LINE L1 3018 5167 -1700 250 44 22 22 chr18 6858396 6858441 -79819107 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 9902 202 33 34 chr18 6858441 6860141 -79817407 + L1PB1 LINE L1 5167 6867 0 867 146 15 0 chr18 6860275 6860405 -79817143 + FLAM_C SINE Alu 1 132 -1 13683 169 34 9 chr18 6860455 6865909 -79811639 + L1MA2 LINE L1 13 5854 -1869 2185 117 30 0 chr18 6865909 6866208 -79811340 + AluSc SINE Alu 1 308 -1 13683 169 34 9 chr18 6866208 6868125 -79809423 + L1MA2 LINE L1 5854 7722 -1 354 314 155 56 chr18 6868870 6869109 -79808439 - L2 LINE L2 -114 3199 2985 2650 51 0 0 chr18 6869109 6869420 -79808128 - AluY SINE Alu 0 311 1 354 314 155 56 chr18 6869420 6869476 -79808072 - L2 LINE L2 -328 2985 2936 1498 202 115 12 chr18 6869476 6869807 -79807741 + MLT1A1 LTR MaLR 1 365 0 354 314 155 56 chr18 6869807 6869955 -79807593 - L2 LINE L2 -377 2936 2684 284 331 7 69 chr18 6870057 6870202 -79807346 - MER5B DNA MER1_type -22 156 21 212 371 26 26 chr18 6870106 6870222 -79807326 + MER5A DNA MER1_type 74 189 0 * 272 262 78 10 chr18 6871538 6871641 -79805907 + MER20B DNA MER1_type 1 110 -673 7470 167 59 11 chr18 6871706 6873777 -79803771 + L1MA4 LINE L1 3647 5615 -685 541 39 13 13 chr18 6873777 6873854 -79803694 + (TA)n Simple_repeat Simple_repeat 2 78 0 7470 167 59 11 chr18 6873854 6874017 -79803531 + L1MA4 LINE L1 5615 5769 -531 2343 116 11 8 chr18 6874017 6874371 -79803177 - THE1A LTR MaLR 0 355 1 11432 101 5 6 chr18 6874371 6875952 -79801596 - THE1A-int LTR MaLR 0 1580 1 2112 116 56 9 chr18 6875954 6876291 -79801257 - THE1A LTR MaLR -2 353 1 7470 167 59 11 chr18 6876291 6876578 -79800970 + L1MA4 LINE L1 5769 6295 -5 1446 271 64 17 chr18 6876605 6877181 -79800367 + MER20B DNA MER1_type 167 769 -14 414 314 65 38 chr18 6877326 6877511 -79800037 - MIR SINE MIR 0 262 73 1362 219 42 4 chr18 6877665 6877925 -79799623 + AluJb SINE Alu 1 270 -42 889 171 82 19 chr18 6877993 6878250 -79799298 + MER33 DNA MER1_type 47 319 -5 21 0 0 0 chr18 6878755 6878776 -79798772 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr18 6879043 6879078 -79798470 + AT_rich Low_complexity Low_complexity 1 35 0 285 386 126 31 chr18 6879543 6879670 -79797878 + L2 LINE L2 3118 3256 -16 252 297 0 0 chr18 6880207 6880271 -79797277 + GA-rich Low_complexity Low_complexity 1 64 0 217 320 67 0 chr18 6880341 6880416 -79797132 + L2 LINE L2 3231 3310 -3 2672 234 38 23 chr18 6880651 6881582 -79795966 + L1M4 LINE L1 2200 3144 -3002 462 309 6 0 chr18 6881589 6881751 -79795797 + L1P3 LINE L1 10 172 -6289 2245 80 0 3 chr18 6881752 6882072 -79795476 + AluY SINE Alu 1 319 0 11823 161 13 8 chr18 6882075 6882253 -79795295 + L1P LINE L1 2014 2190 -3956 1883 124 42 0 chr18 6882253 6882581 -79794967 + L1PB1 LINE L1 5819 6161 0 11823 161 13 8 chr18 6882581 6884716 -79792832 + L1P LINE L1 2190 4343 -1803 637 285 24 16 chr18 6884733 6884982 -79792566 - L1ME3A LINE L1 -314 5856 5606 248 234 30 0 chr18 6884983 6885058 -79792490 - L1P4 LINE L1 -581 5584 5508 1143 159 23 0 chr18 6885351 6885571 -79791977 - L1MB4 LINE L1 -10 6170 5946 567 226 58 7 chr18 6886484 6886621 -79790927 - MER58B DNA MER1_type 0 341 198 * 6892 186 148 21 chr18 6886619 6888170 -79789378 - MER52A LTR ERV1 -7 1748 1 1753 133 16 3 chr18 6888173 6888658 -79788890 - MER52A-int LTR ERV1 -2 7089 6564 * 10504 136 15 6 chr18 6888652 6891546 -79786002 - MER52A-int LTR ERV1 -3826 3265 427 428 189 0 11 chr18 6891570 6891665 -79785883 + GA-rich Low_complexity Low_complexity 1 94 0 2897 137 7 0 chr18 6891667 6892105 -79785443 - MER52A-int LTR ERV1 -6650 441 1 5719 180 149 55 chr18 6892105 6893630 -79783918 - MER52A LTR ERV1 0 1755 3 673 299 67 8 chr18 6894017 6894285 -79783263 + LTR16C LTR ERVL 173 456 -35 293 308 1 40 chr18 6894422 6894535 -79783013 + MIR SINE MIR 38 146 -66 4442 191 45 7 chr18 6894564 6895592 -79781956 - L1MC3 LINE L1 -19 7766 6700 1191 276 15 49 chr18 6896007 6896469 -79781079 + L1M4 LINE L1 3029 3464 -2682 2208 129 0 0 chr18 6896469 6896771 -79780777 + AluSg SINE Alu 1 302 -8 1191 276 15 49 chr18 6896771 6896967 -79780581 + L1M4 LINE L1 3464 3665 -2481 1336 247 36 36 chr18 6897145 6897412 -79780136 + L1M4 LINE L1 4025 4291 -1855 2337 81 0 10 chr18 6897412 6897719 -79779829 + AluY SINE Alu 1 304 -7 1336 247 36 36 chr18 6897719 6897985 -79779563 + L1M4 LINE L1 4290 4558 -1588 642 272 38 14 chr18 6897992 6898205 -79779343 - MER58A DNA MER1_type 0 224 7 370 221 57 8 chr18 6898289 6898411 -79779137 + L1M4 LINE L1 5259 5386 -760 483 174 0 0 chr18 6898762 6898854 -79778694 + L1P5 LINE L1 5598 5689 -467 9347 194 99 25 chr18 6898856 6899726 -79777822 + L1MA2 LINE L1 17 820 -6745 1826 149 149 8 chr18 6899726 6900094 -79777454 + MSTA LTR MaLR 5 424 -4 9347 194 99 25 chr18 6900094 6900846 -79776702 + L1MA2 LINE L1 820 1514 -6051 288 0 0 0 chr18 6900846 6900878 -79776670 + (CA)n Simple_repeat Simple_repeat 1 32 0 9347 194 99 25 chr18 6900878 6901335 -79776213 + L1MA2 LINE L1 1514 2253 -5312 21 82 0 0 chr18 6901339 6901388 -79776160 + AT_rich Low_complexity Low_complexity 1 49 0 340 86 0 0 chr18 6901409 6901467 -79776081 + L1MA2 LINE L1 2249 2306 -5259 2807 176 23 8 chr18 6901487 6902527 -79775021 + L1MA2 LINE L1 3112 4169 -3396 3020 199 29 19 chr18 6903291 6904116 -79773432 + L1MA2 LINE L1 4165 4997 -2568 40698 35 22 0 chr18 6904118 6910137 -79767411 + L1PA2 LINE L1 1 6154 -1 5662 183 14 18 chr18 6910131 6911386 -79766162 + L1MA2 LINE L1 4981 6231 -1334 * 6354 110 19 14 chr18 6911372 6912479 -79765069 + L1MA2 LINE L1 6608 7720 -3 2065 163 63 0 chr18 6912515 6912566 -79764982 + L1PA16 LINE L1 5725 5771 -395 192 77 0 0 chr18 6912566 6912592 -79764956 + (TA)n Simple_repeat Simple_repeat 2 27 0 2065 163 63 0 chr18 6912592 6912939 -79764609 + L1PA16 LINE L1 5771 6148 -18 483 294 96 23 chr18 6913310 6913528 -79764020 + MIR SINE MIR 23 256 -6 415 357 7 7 chr18 6914776 6914919 -79762629 + MIR SINE MIR 71 213 -49 245 200 18 0 chr18 6914993 6915048 -79762500 + T-rich Low_complexity Low_complexity 3 58 0 272 68 0 23 chr18 6915471 6915515 -79762033 + (ATG)n Simple_repeat Simple_repeat 2 44 0 2408 84 0 0 chr18 6915772 6916083 -79761465 - AluY SINE Alu 0 311 1 338 265 219 27 chr18 6916296 6916515 -79761033 + L2 LINE L2 3006 3266 -6 315 335 80 6 chr18 6917298 6917474 -79760074 + MIR SINE MIR 7 195 -67 2339 112 0 0 chr18 6917477 6917781 -79759767 + AluSx SINE Alu 1 304 -8 4768 139 70 33 chr18 6918227 6919098 -79758450 - MER4D LTR ERV1 0 903 1 387 259 199 8 chr18 6919984 6920115 -79757433 + MER5A DNA MER1_type 33 188 -1 257 337 11 11 chr18 6920867 6920956 -79756592 + MIR SINE MIR 16 104 -158 789 137 0 8 chr18 6921282 6921413 -79756135 + MSTD LTR MaLR 1 130 -266 2519 78 26 6 chr18 6921467 6921814 -79755734 + THE1A LTR MaLR 2 355 0 2143 134 0 0 chr18 6921938 6922230 -79755318 + AluSx SINE Alu 1 292 -20 449 240 82 62 chr18 6922900 6923046 -79754502 + L2 LINE L2 2944 3092 -221 867 225 62 18 chr18 6923051 6923278 -79754270 - MSTD LTR MaLR -2 394 158 505 140 60 10 chr18 6923491 6923591 -79753957 - MSTD LTR MaLR -288 108 4 375 313 50 22 chr18 6923598 6923777 -79753771 + L2 LINE L2 3112 3295 -18 292 333 31 10 chr18 6923864 6923960 -79753588 - MIR SINE MIR -75 133 36 651 320 114 0 chr18 6924012 6924240 -79753308 + MIR SINE MIR 3 256 -6 222 37 0 0 chr18 6924489 6924516 -79753032 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 380 335 26 13 chr18 6925279 6925434 -79752114 + L1ME LINE L1 341 497 -5573 909 278 27 65 chr18 6925469 6925848 -79751700 + L1ME LINE L1 466 709 -5269 1828 163 58 22 chr18 6925848 6926210 -79751338 + THE1C LTR MaLR 1 375 0 909 278 27 65 chr18 6926210 6926510 -79751038 + L1ME LINE L1 709 1019 -4959 201 176 0 0 chr18 6926583 6926617 -79750931 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1077 184 12 32 chr18 6926988 6927238 -79750310 - MLT1A2 LTR MaLR 0 374 130 3493 78 43 91 chr18 6927240 6927842 -79749706 + LTR12 LTR ERV1 3 575 -139 631 157 8 30 chr18 6927846 6927966 -79749582 - MLT1A2 LTR MaLR -242 123 4 1534 214 29 29 chr18 6928024 6928398 -79749150 + MLT1A2 LTR MaLR 1 374 0 1031 274 77 10 chr18 6928561 6928962 -79748586 + LTR16A LTR ERVL 17 444 -6 562 119 9 46 chr18 6929195 6929304 -79748244 + MER115 DNA AcHobo 542 646 -47 1692 132 67 0 chr18 6930782 6931113 -79746435 - MER47A DNA MER2_type 0 366 14 1753 195 21 47 chr18 6931983 6932408 -79745140 + MLT2D LTR ERVL 1 414 0 1956 178 12 0 chr18 6932779 6933122 -79744426 + MER7A DNA MER2_type 1 345 -1 1740 177 28 0 chr18 6933566 6933727 -79743821 - AluJo SINE Alu -21 291 117 243 0 0 0 chr18 6933727 6933754 -79743794 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1740 177 28 0 chr18 6933754 6933875 -79743673 - AluJo SINE Alu -195 117 1 402 269 39 58 chr18 6933877 6934033 -79743515 - MIR SINE MIR -65 197 45 331 188 29 0 chr18 6935734 6935803 -79741745 + MER67B LTR ERV1 591 661 0 1229 224 9 68 chr18 6936035 6936356 -79741192 + AluJb SINE Alu 1 302 -10 3261 165 23 0 chr18 6936406 6937018 -79740530 + L1PA16 LINE L1 5519 6144 -22 2018 47 4 0 chr18 6937714 6937970 -79739578 + L1PA4 LINE L1 5896 6152 -3 324 203 39 62 chr18 6938538 6938666 -79738882 + LTR33 LTR ERVL 42 166 -355 448 220 128 20 chr18 6938674 6938854 -79738694 + MLT1B LTR MaLR 1 191 -183 207 114 0 0 chr18 6938865 6938900 -79738648 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 730 231 45 20 chr18 6938903 6939102 -79738446 + MLT1B LTR MaLR 187 390 0 474 299 39 5 chr18 6939153 6939357 -79738191 + LTR33 LTR ERVL 298 508 -13 866 188 9 103 chr18 6939358 6939582 -79737966 - MER58A DNA MER1_type -3 221 19 271 342 25 0 chr18 6940162 6940320 -79737228 + LTR33 LTR ERVL 347 508 -13 733 205 13 107 chr18 6940321 6940545 -79737003 - MER58A DNA MER1_type -3 221 19 2227 104 3 0 chr18 6941474 6941771 -79735777 + AluSg SINE Alu 1 298 -12 1975 189 74 45 chr18 6941962 6942226 -79735322 - MLT1D LTR MaLR -3 502 216 207 69 0 0 chr18 6942226 6942255 -79735293 + (CA)n Simple_repeat Simple_repeat 1 29 0 1975 189 74 45 chr18 6942255 6942478 -79735070 - MLT1D LTR MaLR -289 216 1 1811 164 5 84 chr18 6942548 6942964 -79734584 - MLT1B LTR MaLR -7 383 1 1041 216 20 88 chr18 6943177 6943528 -79734020 + MLT1A2 LTR MaLR 48 374 0 255 304 106 64 chr18 6943531 6943843 -79733705 - L2 LINE L2 -961 2353 2029 441 327 29 22 chr18 6943938 6944216 -79733332 - LTR16B LTR ERVL -13 451 172 2743 129 106 16 chr18 6944375 6944887 -79732661 + LTR64 LTR ERVK 1 558 0 2346 58 0 0 chr18 6945238 6945512 -79732036 + AluY SINE Alu 29 302 -9 2670 144 2 9 chr18 6945739 6946168 -79731380 + MSTA LTR MaLR 3 428 0 485 248 53 15 chr18 6946500 6946633 -79730915 + MIR SINE MIR 4 141 -121 245 239 33 43 chr18 6946742 6946834 -79730714 + L1MC4a LINE L1 5945 6035 -1773 249 235 0 29 chr18 6947027 6947095 -79730453 + CT-rich Low_complexity Low_complexity 2 67 0 204 264 320 0 chr18 6947301 6947426 -79730122 - MIR SINE MIR -70 192 28 1866 170 110 56 chr18 6947539 6947968 -79729580 + LTR47A LTR ERVL 1 452 0 968 203 52 17 chr18 6948567 6948799 -79728749 + LTR16C LTR ERVL 252 491 0 221 224 35 35 chr18 6948882 6948940 -79728608 + L2 LINE L2 3211 3268 -4 225 214 161 71 chr18 6950480 6950592 -79726956 - L1ME3A LINE L1 -5 6165 6044 548 271 109 1 chr18 6950622 6950802 -79726746 - L1ME3A LINE L1 -532 5630 5444 595 285 105 35 chr18 6951050 6951278 -79726270 + MIR SINE MIR 6 249 -13 1142 188 18 0 chr18 6951434 6951652 -79725896 + AluJo SINE Alu 87 308 -4 183 80 0 0 chr18 6952809 6952834 -79724714 + (CA)n Simple_repeat Simple_repeat 2 26 0 617 267 5 55 chr18 6952847 6953049 -79724499 - MIR SINE MIR -6 256 65 207 333 0 0 chr18 6953097 6953160 -79724388 + C-rich Low_complexity Low_complexity 2 64 0 238 262 0 16 chr18 6953638 6953699 -79723849 + (CAA)n Simple_repeat Simple_repeat 2 61 0 504 295 49 6 chr18 6953719 6953902 -79723646 - MIR SINE MIR -65 197 7 240 380 23 8 chr18 6953899 6954028 -79723520 + MIR3 SINE MIR 68 198 -10 * 30 45 0 0 chr18 6954306 6954350 -79723198 + AT_rich Low_complexity Low_complexity 1 44 0 2065 111 0 0 chr18 6955260 6955592 -79721956 + AluY SINE Alu 1 332 0 343 336 9 0 chr18 6956302 6956412 -79721136 - L2 LINE L2 0 3313 3203 1478 128 144 12 chr18 6957018 6957275 -79720273 + AluSg1 SINE Alu 1 291 -18 1463 187 3 102 chr18 6958158 6958490 -79719058 + AluJb SINE Alu 1 299 -3 913 203 33 6 chr18 6958517 6958699 -79718849 + L1MC1 LINE L1 6142 6328 -5 2619 46 0 30 chr18 6958702 6959030 -79718518 - AluYb8 SINE Alu 0 318 1 2147 108 7 33 chr18 6960433 6960739 -79716809 + AluSq SINE Alu 1 298 -15 239 320 196 0 chr18 6961217 6961411 -79716137 + MIR SINE MIR 34 262 0 353 385 75 28 chr18 6961672 6962392 -79715156 - L2 LINE L2 -1579 1735 982 307 294 109 0 chr18 6963112 6963204 -79714344 - MIR SINE MIR -114 148 47 3735 89 30 58 chr18 6963212 6963358 -79714190 + MER41A LTR ERV1 1 150 -404 742 24 0 0 chr18 6963358 6963442 -79714106 + L1PA5 LINE L1 6066 6149 -5 3735 89 30 58 chr18 6963442 6963865 -79713683 + MER41A LTR ERV1 150 554 0 193 324 40 14 chr18 6964722 6964796 -79712752 - MIR SINE MIR -113 149 74 1654 203 3 10 chr18 6964929 6965234 -79712314 + AluJo SINE Alu 3 305 -7 4996 93 67 0 chr18 6965895 6966540 -79711008 + LTR12 LTR ERV1 1 688 0 18742 103 9 8 chr18 6966582 6969191 -79708357 + HERV9 LTR ERV1 40 2630 -1994 476 239 204 18 chr18 6970783 6970984 -79706564 - MIR SINE MIR -25 237 1 1168 265 33 3 chr18 6973040 6973342 -79704206 + L1MEc LINE L1 437 747 -5649 711 190 0 9 chr18 6974420 6974536 -79703012 - FLAM_A SINE Alu -18 115 1 241 303 128 58 chr18 6975514 6975702 -79701846 + MLT1K LTR MaLR 185 385 -203 265 323 0 10 chr18 6975741 6975837 -79701711 + MLT1K LTR MaLR 458 552 -36 501 302 0 0 chr18 6975854 6975970 -79701578 - MER94 DNA DNA -15 119 4 265 278 44 0 chr18 6976247 6976337 -79701211 - MER103 DNA DNA -1 165 72 10965 110 3 3 chr18 6976766 6978284 -79699264 + HERV17 LTR ERV1 1455 2972 -5427 1275 138 5 0 chr18 6978283 6978471 -79699077 + HERV17 LTR ERV1 4756 4944 -3455 * 1944 109 17 52 chr18 6978457 6979258 -79698290 + HERV17 LTR ERV1 696 1720 -5176 * 4858 91 5 0 chr18 6979253 6979893 -79697655 + HERV17 LTR ERV1 7757 8399 0 5618 74 132 0 chr18 6979893 6980623 -79696925 + LTR12 LTR ERV1 1 826 0 1664 176 7 14 chr18 6980664 6980998 -79696550 - AluJb SINE Alu 0 332 1 859 278 85 54 chr18 6981257 6981542 -79696006 - MLT1L LTR MaLR 0 511 276 715 252 0 0 chr18 6981542 6981673 -79695875 - FLAM_A SINE Alu -2 131 1 859 278 85 54 chr18 6981673 6981945 -79695603 - MLT1L LTR MaLR -235 276 14 2155 137 0 6 chr18 6982032 6982345 -79695203 + AluSx SINE Alu 1 311 -1 24 0 0 0 chr18 6982603 6982627 -79694921 + AT_rich Low_complexity Low_complexity 1 24 0 5417 134 10 12 chr18 6982994 6983830 -79693718 - HSMAR2 DNA Mariner 0 1302 469 1788 204 131 7 chr18 6984107 6984368 -79693180 + MLT2C2 LTR ERVL 1 228 -236 624 212 25 0 chr18 6984368 6984486 -79693062 + FLAM_C SINE Alu 1 121 -12 1788 204 131 7 chr18 6984486 6984635 -79692913 + MLT2C2 LTR ERVL 228 462 -2 213 39 0 0 chr18 6986015 6986041 -79691507 + (A)n Simple_repeat Simple_repeat 1 26 0 275 352 56 37 chr18 6986333 6986495 -79691053 - L2 LINE L2 -4 3268 3104 2940 162 17 22 chr18 6986529 6987175 -79690373 + LTR34 LTR ERV1 3 683 -16 2789 181 40 21 chr18 6987707 6988237 -79689311 + MER67A LTR ERV1 1 540 -3 309 259 0 35 chr18 6988293 6988378 -79689170 - MLT1J2 LTR MaLR -8 442 361 290 305 42 54 chr18 6988454 6988621 -79688927 - MLT1I LTR MaLR -205 204 40 2430 133 120 5 chr18 6988861 6989245 -79688303 + MSTA LTR MaLR 1 428 0 271 200 27 13 chr18 6989408 6989483 -79688065 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 2237 183 44 18 chr18 6989519 6989999 -79687549 - LTR29 LTR ERV1 0 644 137 398 260 0 0 chr18 6990003 6990099 -79687449 - MER34 LTR ERV1 -446 96 1 3127 137 20 24 chr18 6990160 6990657 -79686891 - MER41E LTR ERV1 0 512 18 330 154 108 0 chr18 6990932 6990997 -79686551 - MER96B DNA MER1_type? -173 244 173 1523 198 116 49 chr18 6991049 6991499 -79686049 - MER31A LTR ERV1 0 485 6 535 164 31 101 chr18 6991504 6991538 -79686010 + MER96B DNA MER1_type? 270 305 -112 2205 101 11 0 chr18 6991538 6991825 -79685723 - AluSc SINE Alu -19 290 1 535 164 31 101 chr18 6991825 6991949 -79685599 + MER96B DNA MER1_type? 305 417 0 240 250 38 25 chr18 6992355 6992435 -79685113 + L1ME4a LINE L1 5970 6050 -71 353 246 90 147 chr18 6992580 6992706 -79684842 + MLT1K LTR MaLR 148 280 -308 1950 204 61 57 chr18 6992706 6993265 -79684283 + MER34B LTR ERV1 5 565 0 353 246 90 147 chr18 6993265 6993467 -79684081 + MLT1K LTR MaLR 280 444 -144 2758 178 131 43 chr18 6993467 6994190 -79683358 + LTR48 LTR ERV1 1 787 0 353 246 90 147 chr18 6994190 6994328 -79683220 + MLT1K LTR MaLR 444 588 0 21 0 0 0 chr18 6994356 6994377 -79683171 + AT_rich Low_complexity Low_complexity 1 21 0 1726 168 52 0 chr18 6994468 6994754 -79682794 + AluSq SINE Alu 1 301 -12 381 293 7 34 chr18 6995394 6995541 -79682007 + L1ME LINE L1 5559 5701 -420 27 49 0 0 chr18 6996588 6996629 -79680919 + AT_rich Low_complexity Low_complexity 1 41 0 232 279 118 15 chr18 6996657 6996793 -79680755 + L1ME LINE L1 5764 5913 -208 332 316 122 25 chr18 6997597 6997834 -79679714 + MIR SINE MIR 1 260 -2 330 281 133 0 chr18 6999029 6999164 -79678384 + L3 LINE CR1 186 338 -1239 408 361 28 0 chr18 7000731 7000875 -79676673 + MIR SINE MIR 58 205 -57 13124 191 31 35 chr18 7000965 7001881 -79675667 - L1MA3 LINE L1 -7 6480 5562 1814 167 16 7 chr18 7001881 7002187 -79675361 - AluJo SINE Alu -3 309 1 13124 191 31 35 chr18 7002187 7005399 -79672149 - L1MA3 LINE L1 -925 5562 2368 736 221 27 58 chr18 7005413 7005707 -79671841 - L1MA3 LINE L1 -4113 2215 1931 1998 161 113 23 chr18 7005722 7006113 -79671435 + MSTA LTR MaLR 3 428 0 8786 162 12 35 chr18 7006115 7007730 -79669818 + MSTA-int LTR MaLR 3 1580 0 1233 198 76 35 chr18 7007740 7008083 -79669465 + MSTA LTR MaLR 17 373 -2 3632 235 30 12 chr18 7008108 7009440 -79668108 - L1MA3 LINE L1 -4065 1263 544 * 5245 231 49 46 chr18 7009434 7011422 -79666126 + L1PB4 LINE L1 1076 3062 -3786 19844 122 13 16 chr18 7011424 7014743 -79662805 + L1PA6 LINE L1 3 3311 -2835 15694 70 3 2 chr18 7014845 7017054 -79660494 - L1P LINE L1 -1158 4988 2778 15241 75 8 1 chr18 7017157 7019960 -79657588 + L1PA6 LINE L1 3334 6143 -11 11629 198 30 11 chr18 7019962 7022774 -79654774 + L1PB4 LINE L1 3045 5910 -938 1557 130 16 0 chr18 7022764 7023018 -79654530 + L1PB4 LINE L1 6258 6515 -343 * 2150 123 3 7 chr18 7023480 7023790 -79653758 + AluSq SINE Alu 1 309 -4 3249 92 18 0 chr18 7024052 7024497 -79653051 + MLT2A2 LTR ERVL 1 453 0 1473 218 14 11 chr18 7025226 7025580 -79651968 + L1PB4 LINE L1 6504 6858 0 195 375 28 56 chr18 7025687 7025831 -79651717 - L2 LINE L2 -17 3255 3116 1908 177 66 52 chr18 7026165 7026668 -79650880 - LTR54 LTR ERV1 0 510 1 216 0 0 0 chr18 7027127 7027151 -79650397 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 237 245 32 25 chr18 7027647 7027731 -79649817 - MIR SINE MIR -81 127 72 21 71 0 0 chr18 7027792 7027834 -79649714 + AT_rich Low_complexity Low_complexity 1 42 0 1005 234 21 25 chr18 7028139 7028378 -79649170 + MER8 DNA MER2_type 1 238 -1 1484 273 64 9 chr18 7029459 7030038 -79647510 + L1ME3 LINE L1 5508 6118 -44 380 336 25 0 chr18 7030056 7030178 -79647370 - MIR3 SINE MIR -2 206 82 194 329 43 0 chr18 7030197 7030267 -79647281 - L2 LINE L2 -43 3229 3157 23 0 0 0 chr18 7030284 7030307 -79647241 + AT_rich Low_complexity Low_complexity 1 23 0 239 307 11 23 chr18 7030349 7030437 -79647111 - MIR3 SINE MIR -119 89 3 308 250 0 0 chr18 7031067 7031131 -79646417 - LTR16C LTR ERVL 0 491 428 607 298 37 5 chr18 7031207 7031422 -79646126 - LTR16C LTR ERVL -199 292 71 2085 103 41 0 chr18 7031867 7032158 -79645390 + AluSx SINE Alu 1 303 -9 1507 282 71 13 chr18 7032175 7032853 -79644695 - HAL1b LINE L1 -252 1096 380 183 80 0 0 chr18 7032950 7032975 -79644573 + (TTCC)n Simple_repeat Simple_repeat 1 25 0 2270 123 3 0 chr18 7033026 7033336 -79644212 - AluSp SINE Alu -2 311 1 209 235 0 39 chr18 7033858 7033909 -79643639 + MIR SINE MIR 101 149 -113 1931 136 35 32 chr18 7033913 7034287 -79643261 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr18 7035722 7035743 -79641805 + AT_rich Low_complexity Low_complexity 1 21 0 868 160 101 0 chr18 7037739 7037908 -79639640 + MER2 DNA MER2_type 21 206 -139 410 247 80 30 chr18 7038044 7038320 -79639228 + MLT1L LTR MaLR 224 606 -9 887 230 72 10 chr18 7038503 7038712 -79638836 - MER58A DNA MER1_type 0 224 3 315 282 49 37 chr18 7039035 7039198 -79638350 + MLT1J LTR MaLR 347 511 0 478 309 83 26 chr18 7039728 7039958 -79637590 + MIR SINE MIR 9 251 -11 587 321 74 25 chr18 7039990 7040395 -79637153 - MLT1J LTR MaLR -23 488 64 2046 149 0 9 chr18 7040398 7040713 -79636835 + AluSx SINE Alu 1 312 0 823 149 22 0 chr18 7041664 7041798 -79635750 - FLAM_A SINE Alu 0 142 6 352 313 87 70 chr18 7043697 7043902 -79633646 - L2 LINE L2 -4 3309 3109 2493 164 37 45 chr18 7043902 7044437 -79633111 + LTR26B LTR ERV1 1 531 0 352 313 87 70 chr18 7044437 7044701 -79632847 - L2 LINE L2 -204 3109 2832 416 307 40 7 chr18 7045217 7045491 -79632057 + L1M4 LINE L1 4744 5026 -1120 1755 116 27 14 chr18 7045496 7045790 -79631758 + L1MC1 LINE L1 6011 6308 -25 673 176 0 8 chr18 7045790 7045909 -79631639 + AluJb SINE Alu 17 134 -178 375 212 114 23 chr18 7045914 7046046 -79631502 + L1M4 LINE L1 5013 5156 -990 1642 141 14 7 chr18 7046363 7046647 -79630901 + MER72 LTR ERV1 1 286 -436 1039 132 44 22 chr18 7046648 7046830 -79630718 - AluJo SINE Alu -46 266 81 470 143 13 0 chr18 7046830 7046907 -79630641 - MER72 LTR ERV1 -537 185 108 627 144 0 10 chr18 7046907 7047004 -79630544 - AluJo SINE Alu -210 102 7 2307 172 16 0 chr18 7047005 7047447 -79630101 + MER72 LTR ERV1 274 722 0 439 335 79 9 chr18 7049171 7049398 -79628150 + L2 LINE L2 2625 2867 -447 1461 167 71 36 chr18 7049537 7049818 -79627730 - AluJo SINE Alu -21 291 1 305 175 18 0 chr18 7049850 7049907 -79627641 + MIR SINE MIR 120 177 -85 1666 296 93 36 chr18 7051737 7053332 -79624216 - L1ME3 LINE L1 -310 5852 4116 210 71 0 0 chr18 7053332 7053360 -79624188 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 1666 296 93 36 chr18 7053360 7053754 -79623794 - L1ME3 LINE L1 -2046 4116 3746 239 371 41 10 chr18 7054200 7054297 -79623251 - L2 LINE L2 -16 3256 3157 366 23 0 0 chr18 7054447 7054490 -79623058 + (TG)n Simple_repeat Simple_repeat 2 44 0 556 297 11 17 chr18 7054729 7054904 -79622644 - MER5A DNA MER1_type -2 187 14 293 280 213 24 chr18 7059130 7059341 -79618207 - MLT1L LTR MaLR -364 251 1 232 316 32 0 chr18 7059691 7059786 -79617762 - MIR SINE MIR -5 257 160 203 315 0 56 chr18 7060220 7060309 -79617239 - MIR SINE MIR -111 151 68 185 95 0 48 chr18 7060689 7060731 -79616817 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 2180 184 45 2 chr18 7060766 7061211 -79616337 - MLT2C2 LTR ERVL 0 464 1 1249 258 119 21 chr18 7062438 7062966 -79614582 + MLT1G1 LTR MaLR 5 584 -11 294 164 18 0 chr18 7062969 7063024 -79614524 - MIR SINE MIR -98 164 109 6378 101 45 4 chr18 7063098 7064280 -79613268 + L1MA3 LINE L1 5076 6305 0 21 36 0 0 chr18 7064374 7064402 -79613146 + AT_rich Low_complexity Low_complexity 1 28 0 37 23 0 0 chr18 7064519 7064563 -79612985 + AT_rich Low_complexity Low_complexity 1 44 0 1676 174 7 0 chr18 7066304 7066574 -79610974 + AluSx SINE Alu 22 293 -19 716 201 0 84 chr18 7066738 7066809 -79610739 - MER20 DNA MER1_type -55 164 89 4491 194 46 26 chr18 7066809 7067829 -79609719 + MER45B DNA AcHobo 1 1040 0 716 201 0 84 chr18 7067829 7067936 -79609612 - MER20 DNA MER1_type -130 89 1 2118 150 0 3 chr18 7067981 7068294 -79609254 + AluSx SINE Alu 1 312 0 246 279 0 0 chr18 7068466 7068534 -79609014 - Charlie2 DNA MER1_type -2531 251 184 312 247 0 26 chr18 7068697 7068774 -79608774 - Charlie2 DNA MER1_type -2687 95 21 377 313 28 33 chr18 7069041 7069223 -79608325 - MIR SINE MIR -48 214 34 198 171 0 0 chr18 7069316 7069357 -79608191 + (TA)n Simple_repeat Simple_repeat 2 42 0 495 153 153 0 chr18 7070107 7070205 -79607343 + FLAM_A SINE Alu 10 122 -20 197 294 17 76 chr18 7070400 7070519 -79607029 - L2 LINE L2 -1 3271 3160 326 278 21 10 chr18 7070529 7070626 -79606922 - MER5B DNA MER1_type -6 172 75 3080 131 44 16 chr18 7070888 7071224 -79606324 - L1PB4 LINE L1 -13 6143 5785 303 93 0 0 chr18 7071224 7071267 -79606281 + (TATG)n Simple_repeat Simple_repeat 2 44 0 3080 131 44 16 chr18 7071267 7071474 -79606074 - L1PB4 LINE L1 -371 5785 5585 234 333 0 0 chr18 7072022 7072088 -79605460 + L2 LINE L2 3207 3272 0 1634 201 3 16 chr18 7072830 7073134 -79604414 + AluJb SINE Alu 1 300 -12 189 180 40 20 chr18 7073465 7073515 -79604033 - MIR SINE MIR -141 121 71 230 317 75 70 chr18 7074221 7074407 -79603141 - MIR SINE MIR -68 194 8 310 331 106 25 chr18 7075002 7075247 -79602301 + L1ME4a LINE L1 5813 6077 -44 2743 208 53 10 chr18 7075477 7076096 -79601452 + MER82 DNA MER2_type 2 647 -6 3120 242 25 6 chr18 7076101 7076134 -79601414 + L1ME2 LINE L1 2295 2326 -3820 6226 186 21 46 chr18 7076134 7078212 -79599336 + L1PA15 LINE L1 4106 6160 -5 3120 242 25 6 chr18 7078212 7079163 -79598385 + L1ME2 LINE L1 2326 3298 -2848 1538 205 55 29 chr18 7079169 7079550 -79597998 - MSTD LTR MaLR 0 396 6 2863 231 26 9 chr18 7079557 7080210 -79597338 - MSTD-int LTR MaLR -2 1733 1019 2502 114 31 57 chr18 7080219 7080765 -79596783 + LTR21A LTR ERV1 1 498 -7 3337 241 62 46 chr18 7080765 7081757 -79595791 - MSTD-int LTR MaLR -727 1008 2 1423 224 63 22 chr18 7081759 7082121 -79595427 - MSTD LTR MaLR 0 396 20 365 269 117 16 chr18 7082122 7082371 -79595177 + L1ME2 LINE L1 3306 3579 -2567 1404 225 14 43 chr18 7082429 7082798 -79594750 - MLT1A2 LTR MaLR -6 368 11 2386 241 73 22 chr18 7082798 7083561 -79593987 + L1ME2 LINE L1 3936 4751 -1395 1526 168 8 77 chr18 7083561 7083949 -79593599 - MER46B DNA MER2_type 0 236 1 2386 241 73 22 chr18 7083949 7084059 -79593489 + L1ME2 LINE L1 4751 4854 -1292 762 215 215 9 chr18 7084061 7084209 -79593339 - AluJo SINE Alu -9 303 187 584 27 14 0 chr18 7084209 7084283 -79593265 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 762 215 215 9 chr18 7084283 7084367 -79593181 - AluJo SINE Alu -125 187 23 676 236 31 0 chr18 7084367 7084528 -79593020 + MLT1A1 LTR MaLR 199 364 -1 662 230 71 54 chr18 7084531 7084770 -79592778 + L1ME1 LINE L1 5906 6148 -18 181 267 158 10 chr18 7087460 7087561 -79589987 + MIR SINE MIR 135 250 -12 24 32 0 0 chr18 7088972 7089003 -79588545 + GC_rich Low_complexity Low_complexity 1 31 0 416 247 135 47 chr18 7090626 7090796 -79586752 + MIR SINE MIR 2 186 -76 484 245 161 19 chr18 7090921 7090997 -79586551 - MER5A DNA MER1_type 0 189 125 2509 98 6 14 chr18 7090997 7091355 -79586193 + THE1A LTR MaLR 1 355 0 484 245 161 19 chr18 7091355 7091433 -79586115 - MER5A DNA MER1_type -64 125 13 1976 153 7 0 chr18 7092006 7092300 -79585248 - AluJb SINE Alu -8 304 9 324 312 0 24 chr18 7094076 7094204 -79583344 + GA-rich Low_complexity Low_complexity 1 124 0 2640 223 71 33 chr18 7094625 7095665 -79581883 + L1ME2 LINE L1 5056 6142 -22 23 54 0 0 chr18 7095808 7095845 -79581703 + AT_rich Low_complexity Low_complexity 1 37 0 376 289 147 40 chr18 7095953 7096178 -79581370 - L2 LINE L2 0 3272 3024 2209 154 61 17 chr18 7096230 7096638 -79580910 + MSTB LTR MaLR 1 426 0 285 98 0 0 chr18 7097527 7097568 -79579980 + (T)n Simple_repeat Simple_repeat 1 41 0 676 284 108 90 chr18 7098088 7098543 -79579005 + L2 LINE L2 2809 3271 -1 216 196 0 22 chr18 7098649 7098695 -79578853 + (TATG)n Simple_repeat Simple_repeat 2 46 0 464 233 38 79 chr18 7098729 7098995 -79578553 - L1MC5 LINE L1 -48 7913 7659 231 310 43 9 chr18 7099248 7099364 -79578184 - L1M4c LINE L1 -4684 1700 1581 342 269 139 0 chr18 7100865 7100973 -79576575 - L2 LINE L2 -8 3305 3183 2716 173 65 6 chr18 7101417 7101449 -79576099 - MLT2B1 LTR ERVL 0 520 491 228 111 0 0 chr18 7101449 7101485 -79576063 + (TA)n Simple_repeat Simple_repeat 1 36 0 2716 173 65 6 chr18 7101485 7101943 -79575605 - MLT2B1 LTR ERVL -29 491 1 31 0 0 0 chr18 7102192 7102223 -79575325 + AT_rich Low_complexity Low_complexity 1 31 0 227 360 72 46 chr18 7102814 7102967 -79574581 - L2 LINE L2 -20 3252 3096 855 171 163 43 chr18 7103672 7103748 -79573800 + MER46B DNA MER2_type 3 68 -2663 2697 71 6 3 chr18 7103748 7104101 -79573447 - THE1A LTR MaLR -1 354 1 855 171 163 43 chr18 7104101 7104202 -79573346 + MER46B DNA MER2_type 68 98 -2633 347 0 0 23 chr18 7104202 7104246 -79573302 + (TA)n Simple_repeat Simple_repeat 1 43 0 855 171 163 43 chr18 7104246 7104325 -79573223 + MER46B DNA MER2_type 98 166 -70 560 142 0 28 chr18 7104390 7104496 -79573052 + MER46B DNA MER2_type 134 236 0 261 326 182 8 chr18 7104779 7104911 -79572637 - L2 LINE L2 0 3272 3118 470 274 201 19 chr18 7105426 7105685 -79571863 - L2 LINE L2 0 3313 3008 672 125 149 30 chr18 7106671 7106839 -79570709 + MER53 DNA DNA 1 188 -1 759 139 0 0 chr18 7107238 7107353 -79570195 - FLAM_C SINE Alu -12 131 17 886 91 3 0 chr18 7107664 7107807 -79569741 - L1P LINE L1 -3424 2722 2577 867 146 0 0 chr18 7107952 7108075 -79569473 - FRAM SINE Alu -53 123 1 915 75 0 0 chr18 7108113 7108219 -79569329 - AluSg/x SINE Alu -126 186 81 247 215 165 0 chr18 7108247 7108326 -79569222 - L1ME4a LINE L1 -70 6051 5960 523 230 67 0 chr18 7108846 7108981 -79568567 + MIR3 SINE MIR 56 199 -9 2386 103 0 0 chr18 7109432 7109732 -79567816 - AluSg SINE Alu -10 300 1 261 279 184 19 chr18 7110098 7110256 -79567292 - MIR SINE MIR -32 230 47 2180 117 0 7 chr18 7110448 7110748 -79566800 + AluSx SINE Alu 1 298 -14 1894 148 21 7 chr18 7110896 7111187 -79566361 - AluJb SINE Alu -17 295 1 298 328 50 8 chr18 7111335 7111454 -79566094 + MIR SINE MIR 19 142 -66 699 274 80 26 chr18 7113287 7113513 -79564035 + MIR SINE MIR 4 241 -21 360 279 114 6 chr18 7113558 7113716 -79563832 + MIR3 SINE MIR 25 199 -9 244 333 81 10 chr18 7113738 7113837 -79563711 - L2 LINE L2 -49 3223 3118 532 276 184 22 chr18 7114352 7114624 -79562924 - L2 LINE L2 0 3313 2998 * 646 266 103 9 chr18 7114616 7114830 -79562718 - L2 LINE L2 -1030 2284 2051 210 171 24 0 chr18 7114844 7114885 -79562663 + CT-rich Low_complexity Low_complexity 2 43 0 288 264 229 14 chr18 7115405 7115549 -79561999 - MIR3 SINE MIR 0 208 34 206 265 0 0 chr18 7115710 7115759 -79561789 + A-rich Low_complexity Low_complexity 1 49 0 197 224 119 0 chr18 7115980 7116047 -79561501 + L2 LINE L2 1361 1435 -1879 1206 204 0 9 chr18 7116051 7116276 -79561272 + AluJb SINE Alu 85 307 -5 192 328 23 68 chr18 7116278 7116543 -79561005 + L2 LINE L2 1440 1692 -1622 397 284 108 104 chr18 7116906 7117107 -79560441 + L2 LINE L2 1786 1985 -1329 1760 191 23 0 chr18 7117107 7117411 -79560137 - AluJb SINE Alu -1 311 1 397 284 108 104 chr18 7117411 7117642 -79559906 + L2 LINE L2 1985 2220 -1094 2487 54 0 3 chr18 7117644 7117941 -79559607 - AluY SINE Alu -15 296 1 322 333 0 0 chr18 7118062 7118167 -79559381 + L2 LINE L2 2213 2317 -997 913 303 95 11 chr18 7118173 7118543 -79559005 - L2 LINE L2 0 3313 2913 497 326 130 19 chr18 7118522 7118829 -79558719 + L2 LINE L2 2896 3236 -36 * 245 250 67 17 chr18 7119138 7119198 -79558350 - L2 LINE L2 -17 3296 3234 1550 82 0 0 chr18 7119655 7119863 -79557685 - L1PA13 LINE L1 -11 6152 5945 817 210 37 19 chr18 7119915 7120134 -79557414 + MLT1J2 LTR MaLR 20 246 -200 455 245 138 0 chr18 7120131 7120290 -79557258 + MLT1J1 LTR MaLR 264 444 -2 * 234 342 212 15 chr18 7120302 7120571 -79556977 - L2 LINE L2 -900 2414 2093 1428 205 102 36 chr18 7121605 7121996 -79555552 + MLT2C2 LTR ERVL 5 427 -37 414 0 0 0 chr18 7121996 7122042 -79555506 + (TG)n Simple_repeat Simple_repeat 2 47 0 1428 205 102 36 chr18 7122042 7122070 -79555478 + MLT2C2 LTR ERVL 427 452 -12 7927 194 48 32 chr18 7122366 7122477 -79555071 + L1MB5 LINE L1 2962 3070 -3104 1672 207 33 50 chr18 7122477 7122873 -79554675 - MLT1B LTR MaLR -1 389 1 7927 194 48 32 chr18 7122873 7124469 -79553079 + L1MB5 LINE L1 3070 4752 -1422 2175 128 3 0 chr18 7124469 7124766 -79552782 - AluSx SINE Alu -14 298 1 7927 194 48 32 chr18 7124766 7126213 -79551335 + L1MB5 LINE L1 4752 6174 0 2048 137 0 3 chr18 7126455 7126851 -79550697 + AluSx SINE Alu 1 395 0 24 67 0 0 chr18 7127625 7127670 -79549878 + AT_rich Low_complexity Low_complexity 1 45 0 13328 179 26 19 chr18 7127875 7129628 -79547920 - L1PB1 LINE L1 -2 6865 5126 189 0 0 0 chr18 7129628 7129649 -79547899 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 13328 179 26 19 chr18 7129649 7133519 -79544029 - L1PB1 LINE L1 -1741 5126 1057 241 268 0 85 chr18 7133946 7134028 -79543520 + MIR3 SINE MIR 12 86 -122 206 75 0 50 chr18 7134056 7134096 -79543452 + (TTA)n Simple_repeat Simple_repeat 3 40 0 673 268 60 34 chr18 7134197 7134667 -79542881 + L1ME3 LINE L1 758 1239 -4880 805 302 106 20 chr18 7134793 7135103 -79542445 + L1ME3 LINE L1 4614 4896 -1249 1639 209 10 3 chr18 7135103 7135409 -79542139 + AluJb SINE Alu 5 312 0 805 302 106 20 chr18 7135409 7136315 -79541233 + L1ME3 LINE L1 4896 5934 -211 673 187 18 20 chr18 7137093 7137307 -79540241 - MER93b LTR ERV1 -30 343 98 220 250 0 0 chr18 7140214 7140258 -79537290 + MIR SINE MIR 89 132 -76 675 216 0 29 chr18 7142487 7142626 -79534922 - MER5A DNA MER1_type -26 163 29 2314 182 23 19 chr18 7142626 7143103 -79534445 + MER67C LTR ERV1 1 479 -231 1092 114 9 68 chr18 7143146 7143365 -79534183 + Tigger5 DNA MER2_type 2062 2267 -56 452 345 71 5 chr18 7143366 7143563 -79533985 - L2 LINE L2 -252 3020 2811 436 330 74 37 chr18 7143570 7143840 -79533708 - L3 LINE CR1 -1022 555 276 1429 114 5 0 chr18 7143868 7144061 -79533487 + AluSp SINE Alu 106 299 -14 2094 135 0 3 chr18 7144398 7144702 -79532846 + AluSx SINE Alu 5 307 -5 1997 167 158 2 chr18 7144982 7145418 -79532130 - MLT2B2 LTR ERVL -11 504 1 1028 185 29 0 chr18 7145511 7145716 -79531832 + MER2 DNA MER2_type 1 211 -134 1006 256 74 34 chr18 7145759 7146110 -79531438 + MLT1J LTR MaLR 45 409 -102 252 226 0 0 chr18 7146679 7146741 -79530807 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 391 219 126 126 chr18 7146754 7147023 -79530525 - MLT1H LTR MaLR -31 518 250 2891 194 116 9 chr18 7147102 7147869 -79529679 - MER63C DNA MER1_type -2 928 80 4366 83 3 35 chr18 7148217 7148845 -79528703 - LTR14B LTR ERVK 0 608 1 291 183 70 0 chr18 7149523 7149594 -79527954 + MLT1J LTR MaLR 182 257 -310 354 209 0 0 chr18 7149652 7149719 -79527829 + MLT1J LTR MaLR 26 92 -419 2028 238 60 12 chr18 7149725 7149755 -79527793 - MLT2B2 LTR ERVL -8 507 480 442 0 35 0 chr18 7149755 7149813 -79527735 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 2028 238 60 12 chr18 7149813 7150266 -79527282 - MLT2B2 LTR ERVL -35 480 1 426 233 16 31 chr18 7150540 7150669 -79526879 + MLT1J LTR MaLR 384 510 -1 1863 253 64 10 chr18 7150816 7151319 -79526229 + MLT1F1 LTR MaLR 32 561 -6 321 354 7 20 chr18 7151717 7151864 -79525684 - L2 LINE L2 -687 2627 2483 1276 224 129 11 chr18 7152926 7153275 -79524273 - MSTD LTR MaLR -6 390 1 961 176 126 15 chr18 7153279 7153541 -79524007 + MLT1C LTR MaLR 74 364 -103 1022 238 65 4 chr18 7153542 7153773 -79523775 - MLT1A1 LTR MaLR -120 245 1 513 288 18 36 chr18 7153806 7154139 -79523409 + L1M4 LINE L1 3609 3935 -2211 2268 108 0 10 chr18 7155386 7155691 -79521857 + AluSx SINE Alu 1 302 -10 1352 150 57 156 chr18 7156544 7156770 -79520778 + MER31A LTR ERV1 9 256 -287 2125 168 59 0 chr18 7156770 7157144 -79520404 - MSTD LTR MaLR 0 396 1 1352 150 57 156 chr18 7157144 7157444 -79520104 + MER31A LTR ERV1 256 543 0 303 71 0 0 chr18 7158042 7158084 -79519464 + (CA)n Simple_repeat Simple_repeat 2 43 0 1261 181 122 122 chr18 7158196 7158787 -79518761 + LTR49 LTR ERV1 5 595 0 13320 159 118 15 chr18 7159386 7162030 -79515518 + L1M1 LINE L1 17 2932 -4633 3675 234 40 1 chr18 7162040 7162842 -79514706 + L1PA13 LINE L1 1 833 -5954 730 339 103 6 chr18 7162848 7163196 -79514352 + L1PA13 LINE L1 877 1258 -5529 19015 172 18 12 chr18 7163199 7168563 -79508985 + L1PA13 LINE L1 1396 6794 -20 1066 111 0 25 chr18 7168572 7168734 -79508814 + L1PA10 LINE L1 6001 6158 -10 6390 174 28 8 chr18 7168737 7171005 -79506543 + L1MA2 LINE L1 2923 5238 -2327 2211 110 33 36 chr18 7171005 7171370 -79506178 - THE1B LTR MaLR 0 364 1 10064 101 67 2 chr18 7171370 7172854 -79504694 - THE1B-int LTR MaLR 0 1580 1 2322 121 19 25 chr18 7172854 7173218 -79504330 - THE1B LTR MaLR 0 364 3 7796 137 16 5 chr18 7173218 7175681 -79501867 + L1MA2 LINE L1 5232 7723 0 1267 186 68 68 chr18 7176638 7177003 -79500545 + MLT1A1 LTR MaLR 1 365 0 31 0 0 0 chr18 7177102 7177133 -79500415 + AT_rich Low_complexity Low_complexity 1 31 0 222 231 0 0 chr18 7177310 7177362 -79500186 + T-rich Low_complexity Low_complexity 1 52 0 2988 140 55 16 chr18 7177518 7178062 -79499486 - MER34B LTR ERV1 0 565 1 409 291 71 20 chr18 7178117 7178468 -79499080 + L1ME4a LINE L1 5529 5897 -224 183 100 0 0 chr18 7178485 7178515 -79499033 + (TA)n Simple_repeat Simple_repeat 1 30 0 1390 233 49 11 chr18 7178556 7179007 -79498541 + L1MD3 LINE L1 7528 7995 0 684 239 188 23 chr18 7179006 7179358 -79498190 + HAL1 LINE L1 1102 1511 -996 * 389 248 212 40 chr18 7179856 7179949 -79497599 + HAL1 LINE L1 1587 1663 -844 1916 160 88 15 chr18 7179949 7180152 -79497396 - MSTA LTR MaLR 0 428 241 2426 76 0 13 chr18 7180152 7180455 -79497093 - AluY SINE Alu -12 299 1 1916 160 88 15 chr18 7180455 7180650 -79496898 - MSTA LTR MaLR -187 241 1 389 248 212 40 chr18 7180650 7180778 -79496770 + HAL1 LINE L1 1663 1846 -661 520 219 109 23 chr18 7180908 7181173 -79496375 + HAL1 LINE L1 2035 2322 -185 4489 19 0 0 chr18 7181764 7182374 -79495174 - L1PA3 LINE L1 -705 5450 4841 5468 14 48 0 chr18 7182374 7183017 -79494531 + L1PA3 LINE L1 5475 6152 -3 1272 153 65 9 chr18 7183021 7183250 -79494298 + MER21A LTR ERV1 12 253 -678 2186 169 79 51 chr18 7183273 7183805 -79493743 + MER21A LTR ERV1 384 930 -1 316 327 51 19 chr18 7184335 7184491 -79493057 - MIR3 SINE MIR -1 207 47 645 250 144 0 chr18 7184543 7184723 -79492825 - MIR SINE MIR -49 213 8 365 290 136 7 chr18 7186293 7186448 -79491100 + MIR SINE MIR 6 180 -82 426 296 37 0 chr18 7187305 7187413 -79490135 + L2 LINE L2 3143 3254 -18 363 312 102 6 chr18 7188131 7188288 -79489260 - MIR SINE MIR -75 187 16 21 0 0 0 chr18 7190569 7190590 -79486958 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr18 7191329 7191354 -79486194 + AT_rich Low_complexity Low_complexity 1 25 0 649 256 126 33 chr18 7193147 7193362 -79484186 - MIR SINE MIR -13 249 15 1712 103 32 8 chr18 7195816 7196069 -79481479 - AluSx SINE Alu -53 259 1 286 269 22 22 chr18 7196838 7196972 -79480576 + L1MC4 LINE L1 7153 7286 -756 1714 278 82 23 chr18 7196988 7198094 -79479454 + L1ME3A LINE L1 4714 5879 -291 2005 102 3 25 chr18 7198109 7198393 -79479155 + AluSc SINE Alu 1 278 -31 265 242 146 16 chr18 7198519 7198704 -79478844 + L1ME3A LINE L1 5941 6161 -9 383 250 53 46 chr18 7198740 7198892 -79478656 - MLT1L LTR MaLR -440 175 23 417 66 0 0 chr18 7199426 7199487 -79478061 + (TTTTA)n Simple_repeat Simple_repeat 4 64 0 11167 17 0 0 chr18 7199487 7201600 -79475948 - L1HS LINE L1 -16 6139 4026 3194 251 48 10 chr18 7203061 7204487 -79473061 - ERVL-D LTR ERVL -4210 1554 2 559 112 19 0 chr18 7204542 7204649 -79472899 + (TCTA)n Simple_repeat Simple_repeat 2 110 0 1593 184 16 7 chr18 7204651 7204960 -79472588 - MLT2D LTR ERVL -100 314 3 1759 193 44 42 chr18 7204966 7205469 -79472079 - L1M4 LINE L1 -746 5400 4897 2039 119 3 3 chr18 7205469 7205779 -79471769 + MSTA LTR MaLR 1 310 -118 925 85 31 0 chr18 7205985 7206114 -79471434 + MSTA LTR MaLR 296 428 0 472 235 8 0 chr18 7206118 7206237 -79471311 - L1M4 LINE L1 -1250 4896 4777 1440 235 79 42 chr18 7206246 7206766 -79470782 - LTR55 LTR ERV -8 540 2 1943 226 26 7 chr18 7206767 7207307 -79470241 - L1M4 LINE L1 -1368 4778 4229 697 261 48 41 chr18 7207618 7208168 -79469380 - L1MC5 LINE L1 -271 7690 7261 2386 332 53 22 chr18 7208168 7209476 -79468072 + ERVL LTR ERVL 4055 5403 -361 2389 160 39 5 chr18 7209757 7210169 -79467379 + MSTB LTR MaLR 1 426 0 1409 253 69 53 chr18 7210214 7211100 -79466448 + L1M4 LINE L1 3704 4603 -1543 587 309 119 9 chr18 7211333 7211763 -79465785 + L1M4 LINE L1 4740 5216 -930 291 174 91 17 chr18 7211860 7211985 -79465563 + L1P5 LINE L1 5304 5440 -714 2073 179 5 2 chr18 7212012 7212420 -79465128 + L1PA15-16 LINE L1 2242 2650 -4199 37 0 0 0 chr18 7212650 7212687 -79464861 + GC_rich Low_complexity Low_complexity 1 37 0 34 24 0 0 chr18 7212794 7212835 -79464713 + GC_rich Low_complexity Low_complexity 1 41 0 212 176 39 0 chr18 7213298 7213349 -79464199 + (CG)n Simple_repeat Simple_repeat 2 54 0 26 30 0 0 chr18 7213466 7213499 -79464049 + GC_rich Low_complexity Low_complexity 1 33 0 244 287 160 0 chr18 7214496 7214590 -79462958 + MIR SINE MIR 91 199 -63 190 295 95 42 chr18 7214796 7214891 -79462657 + MIR SINE MIR 142 241 -21 374 274 110 66 chr18 7216140 7216458 -79461090 - L2 LINE L2 -66 3247 2916 425 210 30 0 chr18 7216830 7216930 -79460618 + L1MD3 LINE L1 7887 7989 -6 1781 221 77 36 chr18 7216943 7217670 -79459878 - L1MDa LINE L1 -4782 1758 1002 343 249 67 42 chr18 7218114 7218279 -79459269 - L1M4 LINE L1 -3105 3041 2873 932 207 43 55 chr18 7218372 7218531 -79459017 - L1MC4 LINE L1 0 8042 7883 204 111 0 0 chr18 7218531 7218567 -79458981 + (CA)n Simple_repeat Simple_repeat 2 37 0 932 207 43 55 chr18 7218567 7218755 -79458793 - L1MC4 LINE L1 -159 7883 7699 204 219 132 26 chr18 7219968 7220082 -79457466 + L2 LINE L2 2824 2949 -365 365 308 49 81 chr18 7220289 7220474 -79457074 + MIR SINE MIR 23 201 -61 668 209 13 32 chr18 7220485 7220643 -79456905 - MER6B DNA MER2_type 0 210 56 1051 285 73 16 chr18 7220647 7221016 -79456532 - L2 LINE L2 -32 3281 2892 337 253 142 12 chr18 7221221 7221383 -79456165 - L2 LINE L2 -2655 659 477 2083 124 0 17 chr18 7222286 7222584 -79454964 - AluSx SINE Alu -19 293 1 592 124 0 0 chr18 7222767 7222856 -79454692 - FLAM SINE Alu -17 126 38 2029 219 8 12 chr18 7222871 7223351 -79454197 - L1MD3 LINE L1 0 7995 7518 227 278 0 0 chr18 7223375 7223429 -79454119 + MIR3 SINE MIR 150 203 -5 231 114 0 0 chr18 7223445 7223480 -79454068 + (TA)n Simple_repeat Simple_repeat 1 35 0 393 70 0 0 chr18 7223480 7223537 -79454011 + (TAGA)n Simple_repeat Simple_repeat 4 60 0 1801 125 0 32 chr18 7223537 7223817 -79453731 - AluSc SINE Alu -38 271 1 469 114 10 114 chr18 7223839 7224040 -79453508 + (TA)n Simple_repeat Simple_repeat 1 180 0 226 273 23 0 chr18 7224043 7224131 -79453417 + L1MC4 LINE L1 6614 6703 -1339 * 229 274 24 0 chr18 7224091 7224175 -79453373 - L1MC4 LINE L1 -1339 6703 6618 332 287 0 11 chr18 7224217 7224311 -79453237 + L1MC4 LINE L1 6611 6703 -1339 314 279 35 0 chr18 7224234 7224320 -79453228 - L1MC4 LINE L1 -1339 6703 6615 * 506 272 0 11 chr18 7224357 7224537 -79453011 + (CATATA)n Simple_repeat Simple_repeat 3 180 0 240 261 42 25 chr18 7224562 7224681 -79452867 - L1MC4 LINE L1 -1339 6703 6583 306 260 0 62 chr18 7224682 7224778 -79452770 - L1MC4 LINE L1 -1339 6703 6614 * 320 214 0 82 chr18 7224738 7224836 -79452712 + L1MC4 LINE L1 6614 6703 -1339 * 335 292 0 0 chr18 7224830 7224919 -79452629 - L1MC4 LINE L1 -1339 6703 6615 320 311 0 0 chr18 7224876 7224966 -79452582 + L1MC4 LINE L1 6614 6703 -1339 * 356 151 41 35 chr18 7224969 7225141 -79452407 + (TA)n Simple_repeat Simple_repeat 1 173 0 302 202 37 37 chr18 7225185 7225294 -79452254 + (TTTG)n Simple_repeat Simple_repeat 4 112 0 362 132 0 15 chr18 7225308 7225376 -79452172 + (TA)n Simple_repeat Simple_repeat 2 68 0 248 279 13 0 chr18 7225580 7225659 -79451889 + LTR58 LTR ERV1 350 429 -250 334 285 114 13 chr18 7226554 7226712 -79450836 - MIR3 SINE MIR -10 198 25 642 272 79 35 chr18 7226757 7226985 -79450563 - MIR SINE MIR -21 241 4 295 331 41 16 chr18 7228830 7228951 -79448597 - MIR SINE MIR -66 142 19 1894 148 21 7 chr18 7229099 7229390 -79448158 + AluJb SINE Alu 1 295 -17 2110 116 0 13 chr18 7229539 7229841 -79447707 - AluSx SINE Alu -14 298 1 240 306 169 19 chr18 7230033 7230193 -79447355 + MIR SINE MIR 47 230 -32 2255 102 0 13 chr18 7230560 7230863 -79446685 + AluSg SINE Alu 1 299 -11 495 248 58 7 chr18 7231317 7231454 -79446094 - MIR3 SINE MIR -9 199 56 242 265 121 0 chr18 7231973 7232056 -79445492 + L1ME4a LINE L1 5959 6051 -70 883 75 0 9 chr18 7232084 7232191 -79445357 + AluSg/x SINE Alu 79 184 -126 840 161 0 0 chr18 7232229 7232353 -79445195 + FRAM SINE Alu 1 124 -52 886 91 3 0 chr18 7232510 7232653 -79444895 + L1P LINE L1 2577 2722 -3424 759 139 0 0 chr18 7232965 7233080 -79444468 + FLAM_C SINE Alu 17 131 -12 642 124 148 35 chr18 7233481 7233650 -79443898 - MER53 DNA DNA -1 188 1 232 336 178 0 chr18 7234619 7234726 -79442822 + MIR3 SINE MIR 34 159 -49 199 368 29 29 chr18 7234747 7234918 -79442630 + L2 LINE L2 1016 1186 -2128 263 316 138 65 chr18 7235096 7235618 -79441930 + L2 LINE L2 1587 2146 -1168 202 376 84 11 chr18 7235647 7235825 -79441723 + L2 LINE L2 2337 2527 -787 333 298 51 66 chr18 7235926 7236254 -79441294 + L2 LINE L2 2772 3092 -180 1051 214 129 55 chr18 7236277 7236345 -79441203 - MLT1C LTR MaLR 0 467 405 1615 169 30 27 chr18 7236345 7236641 -79440907 + AluSx SINE Alu 1 297 -15 1051 214 129 55 chr18 7236641 7236938 -79440610 - MLT1C LTR MaLR -62 405 63 1465 187 30 33 chr18 7236938 7237243 -79440305 - AluJo SINE Alu -6 306 3 1051 214 129 55 chr18 7237243 7237311 -79440237 - MLT1C LTR MaLR -404 63 1 275 366 81 0 chr18 7237352 7237475 -79440073 + L2 LINE L2 3137 3269 -3 364 286 59 93 chr18 7237960 7238119 -79439429 - MLT1J LTR MaLR -33 478 315 1056 209 69 10 chr18 7238119 7238425 -79439123 + MER33 DNA MER1_type 1 324 0 364 286 59 93 chr18 7238425 7238653 -79438895 - MLT1J LTR MaLR -196 315 104 355 141 96 133 chr18 7238756 7238817 -79438731 - MLT1J LTR MaLR -337 130 68 1282 208 16 36 chr18 7238817 7238983 -79438565 - AluJo SINE Alu -13 299 140 2310 79 10 3 chr18 7238983 7239274 -79438274 - AluSc SINE Alu -16 293 1 1282 208 16 36 chr18 7239274 7239410 -79438138 - AluJo SINE Alu -172 140 3 355 141 96 133 chr18 7239410 7239483 -79438065 - MLT1J LTR MaLR -399 68 1 331 339 50 42 chr18 7240775 7241035 -79436513 + L1MEd LINE L1 987 1248 -4871 243 0 0 0 chr18 7241049 7241076 -79436472 + (CA)n Simple_repeat Simple_repeat 1 27 0 2608 240 38 32 chr18 7241484 7242231 -79435317 + L1PA12 LINE L1 2 752 -6829 * 11452 136 14 14 chr18 7242225 7244915 -79432633 + L1PA11 LINE L1 3200 5889 -285 2100 134 6 10 chr18 7244915 7245228 -79432320 + AluSx SINE Alu 1 312 0 330 26 0 0 chr18 7245234 7245273 -79432275 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 11452 136 14 14 chr18 7245273 7245375 -79432173 + L1PA11 LINE L1 5894 5999 -175 423 0 0 0 chr18 7345463 7345510 -79332038 + (TG)n Simple_repeat Simple_repeat 1 47 0 585 158 110 43 chr18 7345792 7345956 -79331592 + FRAM SINE Alu 1 175 -1 369 197 0 0 chr18 7345959 7346035 -79331513 + A-rich Low_complexity Low_complexity 1 76 0 747 0 0 0 chr18 7347089 7347172 -79330376 + (GA)n Simple_repeat Simple_repeat 2 84 0 269 216 23 62 chr18 7348124 7348300 -79329248 + (TATATG)n Simple_repeat Simple_repeat 2 170 0 354 23 0 0 chr18 7348504 7348547 -79329001 + (TG)n Simple_repeat Simple_repeat 2 44 0 22 35 0 0 chr18 7349435 7349464 -79328084 + AT_rich Low_complexity Low_complexity 1 29 0 509 311 40 50 chr18 7349759 7350081 -79327467 - L1MD2 LINE L1 -384 5975 5657 249 109 0 0 chr18 7350628 7350674 -79326874 + (T)n Simple_repeat Simple_repeat 1 46 0 23 33 0 0 chr18 7351138 7351168 -79326380 + AT_rich Low_complexity Low_complexity 1 30 0 235 268 141 0 chr18 7352354 7352425 -79325123 - FLAM_A SINE Alu -32 101 21 414 39 0 0 chr18 7352524 7352576 -79324972 + (TA)n Simple_repeat Simple_repeat 2 53 0 213 188 0 42 chr18 7353606 7353654 -79323894 + A-rich Low_complexity Low_complexity 2 47 0 210 71 0 0 chr18 7354207 7354235 -79323313 + (TA)n Simple_repeat Simple_repeat 1 28 0 236 184 20 0 chr18 7354842 7354891 -79322657 - Alu SINE Alu -110 193 144 457 53 0 27 chr18 7355372 7355447 -79322101 + (TG)n Simple_repeat Simple_repeat 2 74 0 327 105 0 0 chr18 7355564 7355621 -79321927 + (TG)n Simple_repeat Simple_repeat 2 58 0 187 358 0 15 chr18 7356547 7356614 -79320934 - L2 LINE L2 -531 2783 2718 375 60 0 0 chr18 7357075 7357125 -79320423 + (GA)n Simple_repeat Simple_repeat 1 50 0 206 154 0 58 chr18 7357214 7357266 -79320282 + A-rich Low_complexity Low_complexity 2 50 0 322 281 18 18 chr18 7359124 7359227 -79318321 + MLT2C1 LTR ERVL 236 341 -56 470 70 14 0 chr18 7359227 7359298 -79318250 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 307 221 134 39 chr18 7362221 7362376 -79315172 - FLAM_A SINE Alu -28 105 12 456 213 112 47 chr18 7362645 7362814 -79314734 - FRAM SINE Alu -2 174 1 276 174 0 0 chr18 7363063 7363109 -79314439 + PMER1 DNA MER1_type 8 53 -37 222 233 0 0 chr18 7364846 7364906 -79312642 + (CA)n Simple_repeat Simple_repeat 1 60 0 363 294 0 0 chr18 7364907 7364999 -79312549 + L1MC4 LINE L1 6614 6705 -1337 565 13 0 26 chr18 7365229 7365305 -79312243 + (TC)n Simple_repeat Simple_repeat 2 75 0 23 0 0 0 chr18 7365971 7365994 -79311554 + AT_rich Low_complexity Low_complexity 1 23 0 7002 270 19 10 chr18 7368331 7371522 -79306026 + L1MA9 LINE L1 2710 5931 -381 208 227 15 30 chr18 7373525 7373591 -79303957 + (TATATG)n Simple_repeat Simple_repeat 6 70 0 420 81 0 90 chr18 7374232 7374343 -79303205 + (GGGA)n Simple_repeat Simple_repeat 2 102 0 38 39 0 0 chr18 7375675 7375727 -79301821 + AT_rich Low_complexity Low_complexity 1 52 0 21 0 0 0 chr18 7375750 7375771 -79301777 + AT_rich Low_complexity Low_complexity 1 21 0 322 198 24 111 chr18 7376206 7376332 -79301216 + AluSq/x SINE Alu 2 116 -186 505 234 90 11 chr18 7377855 7378043 -79299505 - L1MA5 LINE L1 -301 5999 5797 266 0 29 0 chr18 7378046 7378080 -79299468 + (TAA)n Simple_repeat Simple_repeat 2 36 0 526 211 100 21 chr18 7378792 7378982 -79298566 - L1MA5 LINE L1 -501 5811 5607 284 230 22 65 chr18 7379026 7379165 -79298383 - L1MA5 LINE L1 -859 5287 5155 228 230 72 40 chr18 7380296 7380380 -79297168 + MIR SINE MIR 70 161 -47 23 68 0 0 chr18 7381850 7381894 -79295654 + AT_rich Low_complexity Low_complexity 1 44 0 216 97 0 0 chr18 7382263 7382294 -79295254 + (CGTG)n Simple_repeat Simple_repeat 1 31 0 432 0 0 0 chr18 7382727 7382775 -79294773 + (TG)n Simple_repeat Simple_repeat 1 48 0 26 82 0 0 chr18 7383897 7383958 -79293590 + AT_rich Low_complexity Low_complexity 1 61 0 564 57 78 7 chr18 7384034 7384175 -79293373 + (TA)n Simple_repeat Simple_repeat 2 152 0 181 379 24 24 chr18 7384353 7384477 -79293071 + MIR SINE MIR 20 143 -119 277 143 16 16 chr18 7385134 7385197 -79292351 + CT-rich Low_complexity Low_complexity 3 65 0 24 32 0 0 chr18 7385215 7385246 -79292302 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr18 7385340 7385369 -79292179 + AT_rich Low_complexity Low_complexity 1 29 0 186 71 0 0 chr18 7386027 7386055 -79291493 + (A)n Simple_repeat Simple_repeat 1 28 0 214 203 51 51 chr18 7387547 7387606 -79289942 + MIR SINE MIR 7 65 -197 24 0 0 0 chr18 7390350 7390374 -79287174 + AT_rich Low_complexity Low_complexity 1 24 0 494 345 103 33 chr18 7390554 7391120 -79286428 - L1ME3A LINE L1 -278 5892 5273 26 0 0 0 chr18 7391200 7391226 -79286322 + AT_rich Low_complexity Low_complexity 1 26 0 259 313 15 8 chr18 7392022 7392156 -79285392 - L1ME3A LINE L1 -2200 3946 3812 22 0 0 0 chr18 7392274 7392296 -79285252 + AT_rich Low_complexity Low_complexity 1 22 0 22 80 0 0 chr18 7392584 7392634 -79284914 + AT_rich Low_complexity Low_complexity 1 50 0 314 48 32 32 chr18 7393734 7393797 -79283751 + (TTTTG)n Simple_repeat Simple_repeat 2 64 0 473 158 120 57 chr18 7393800 7393958 -79283590 - FRAM SINE Alu -1 175 8 273 81 48 0 chr18 7395537 7395599 -79281949 + T-rich Low_complexity Low_complexity 3 67 0 189 0 0 0 chr18 7395762 7395783 -79281765 + (GA)n Simple_repeat Simple_repeat 1 21 0 341 308 0 0 chr18 7396308 7396386 -79281162 + polypyrimidine Low_complexity Low_complexity 3 80 0 971 166 0 33 chr18 7396397 7396578 -79280970 + C-rich Low_complexity Low_complexity 1 175 0 443 168 105 0 chr18 7397538 7397633 -79279915 + FLAM_A SINE Alu 1 105 -37 270 176 0 0 chr18 7400240 7400291 -79277257 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 22 35 0 0 chr18 7400313 7400342 -79277206 + AT_rich Low_complexity Low_complexity 1 29 0 180 97 0 0 chr18 7400871 7400902 -79276646 + (CCTA)n Simple_repeat Simple_repeat 2 32 0 60 59 0 0 chr18 7400917 7401019 -79276529 + AT_rich Low_complexity Low_complexity 1 102 0 574 307 47 36 chr18 7403684 7404049 -79273499 - L1PA15 LINE L1 -235 5930 5562 239 231 0 0 chr18 7404717 7404769 -79272779 + (CATA)n Simple_repeat Simple_repeat 3 54 0 250 300 0 0 chr18 7404774 7404864 -79272684 + L1MC4 LINE L1 6614 6703 -1339 235 289 0 0 chr18 7404788 7404878 -79272670 - L1MC4 LINE L1 -1339 6703 6614 * 897 66 0 0 chr18 7405051 7405172 -79272376 + (GAA)n Simple_repeat Simple_repeat 1 121 0 265 218 30 50 chr18 7405339 7405440 -79272108 + L1MC5 LINE L1 7324 7422 -539 608 282 87 39 chr18 7406667 7406714 -79270834 - L1MA4 LINE L1 -375 5925 5882 279 0 0 0 chr18 7406714 7406745 -79270803 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 608 282 87 39 chr18 7406745 7407030 -79270518 - L1MA4 LINE L1 -418 5882 5577 944 107 0 7 chr18 7407133 7407282 -79270266 + (TTTC)n Simple_repeat Simple_repeat 3 150 0 478 0 0 31 chr18 7407826 7407890 -79269658 + (TTA)n Simple_repeat Simple_repeat 2 63 0 209 239 115 85 chr18 7408950 7409080 -79268468 + MIR SINE MIR 1 134 -128 204 40 0 0 chr18 7409110 7409135 -79268413 + (TTTTTG)n Simple_repeat Simple_repeat 4 28 0 203 288 0 0 chr18 7409694 7409760 -79267788 + (CA)n Simple_repeat Simple_repeat 1 66 0 218 163 41 0 chr18 7411569 7411618 -79265930 + CT-rich Low_complexity Low_complexity 2 52 0 333 47 0 0 chr18 7412029 7412072 -79265476 + (ATG)n Simple_repeat Simple_repeat 2 44 0 23 33 0 0 chr18 7413391 7413421 -79264127 + AT_rich Low_complexity Low_complexity 1 30 0 501 62 0 0 chr18 7414089 7414154 -79263394 + (TC)n Simple_repeat Simple_repeat 1 65 0 23 0 0 0 chr18 7414901 7414924 -79262624 + AT_rich Low_complexity Low_complexity 1 23 0 261 57 0 0 chr18 7417128 7417163 -79260385 + (TG)n Simple_repeat Simple_repeat 2 36 0 287 205 24 24 chr18 7417270 7417353 -79260195 + L1MC5 LINE L1 7698 7780 -181 22 0 0 0 chr18 7417922 7417944 -79259604 + AT_rich Low_complexity Low_complexity 1 22 0 291 219 15 0 chr18 7418689 7418770 -79258778 + MLT2A1 LTR ERVL 367 444 0 21 0 0 0 chr18 7419673 7419694 -79257854 + AT_rich Low_complexity Low_complexity 1 21 0 189 122 102 61 chr18 7419778 7419827 -79257721 - MIR SINE MIR -199 63 13 235 220 0 20 chr18 7423470 7423520 -79254028 + CT-rich Low_complexity Low_complexity 1 49 0 405 0 0 0 chr18 7424858 7424903 -79252645 + (TG)n Simple_repeat Simple_repeat 2 46 0 252 0 0 0 chr18 7426984 7427012 -79250536 + (A)n Simple_repeat Simple_repeat 1 28 0 408 293 84 42 chr18 7429024 7429215 -79248333 + MIR SINE MIR 37 235 -27 213 152 0 91 chr18 7430468 7430567 -79246981 + T-rich Low_complexity Low_complexity 3 92 0 259 175 127 0 chr18 7431006 7431069 -79246479 - AluS SINE Alu -214 89 19 25 0 0 0 chr18 7431115 7431140 -79246408 + AT_rich Low_complexity Low_complexity 1 25 0 226 254 18 0 chr18 7431887 7431942 -79245606 + MLT1A2 LTR MaLR 1 56 -318 27 29 0 0 chr18 7432612 7432646 -79244902 + AT_rich Low_complexity Low_complexity 1 34 0 275 274 106 11 chr18 7432747 7432882 -79244666 + AluSq/x SINE Alu 2 105 -198 526 225 92 17 chr18 7434347 7434520 -79243028 + AluJo SINE Alu 123 308 -4 181 337 95 11 chr18 7434534 7434629 -79242919 + L2 LINE L2 2809 2911 -361 309 68 0 0 chr18 7435278 7435322 -79242226 + (CA)n Simple_repeat Simple_repeat 2 45 0 242 311 42 32 chr18 7435403 7435567 -79241981 + AluSp SINE Alu 133 200 -103 670 84 19 9 chr18 7435583 7435690 -79241858 + (GGGA)n Simple_repeat Simple_repeat 4 111 0 33 25 0 0 chr18 7435852 7435892 -79241656 + AT_rich Low_complexity Low_complexity 1 40 0 26 64 0 0 chr18 7438019 7438066 -79239482 + AT_rich Low_complexity Low_complexity 1 47 0 909 79 0 0 chr18 7441364 7441491 -79236057 + (TG)n Simple_repeat Simple_repeat 2 128 0 239 0 32 0 chr18 7442033 7442064 -79235484 + (TTTTTG)n Simple_repeat Simple_repeat 2 33 0 330 26 0 0 chr18 7442218 7442257 -79235291 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 333 164 193 44 chr18 7442259 7442407 -79235141 - FRAM SINE Alu -12 154 1 252 186 0 0 chr18 7443340 7443399 -79234149 + (TG)n Simple_repeat Simple_repeat 1 59 0 25 0 0 0 chr18 7444009 7444034 -79233514 + AT_rich Low_complexity Low_complexity 1 25 0 972 106 0 0 chr18 7444750 7444920 -79232628 + (CA)n Simple_repeat Simple_repeat 2 171 0 446 184 179 54 chr18 7445250 7445418 -79232130 - AluJo SINE Alu -11 301 113 24 67 0 0 chr18 7448102 7448147 -79229401 + AT_rich Low_complexity Low_complexity 1 45 0 279 272 97 29 chr18 7448173 7448276 -79229272 + FLAM_C SINE Alu 2 111 -22 216 0 0 0 chr18 7448311 7448335 -79229213 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 191 260 114 65 chr18 7448984 7449107 -79228441 + MIR SINE MIR 123 251 -11 256 227 17 38 chr18 7449596 7449797 -79227751 + C-rich Low_complexity Low_complexity 1 196 0 516 175 0 0 chr18 7449798 7449895 -79227653 + CT-rich Low_complexity Low_complexity 2 98 0 293 281 2 0 chr18 7450486 7450588 -79226960 + L1 LINE L1 5174 5276 -870 475 280 62 42 chr18 7452570 7453316 -79224232 + L1M2 LINE L1 1792 2545 -4304 180 0 0 0 chr18 7453372 7453392 -79224156 + (A)n Simple_repeat Simple_repeat 1 20 0 244 328 98 25 chr18 7453852 7453974 -79223574 - MIR SINE MIR -47 215 85 688 117 38 16 chr18 7458770 7459010 -79218538 + (CAGAGA)n Simple_repeat Simple_repeat 1 245 0 222 37 0 0 chr18 7459263 7459290 -79218258 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 202 57 0 57 chr18 7459809 7459844 -79217704 + (TTTTTG)n Simple_repeat Simple_repeat 3 35 0 314 125 0 0 chr18 7464306 7464354 -79213194 - PMER1 DNA MER1_type -37 53 6 34 0 0 0 chr18 7464846 7464880 -79212668 + AT_rich Low_complexity Low_complexity 1 34 0 417 20 0 0 chr18 7466106 7466156 -79211392 + (GA)n Simple_repeat Simple_repeat 1 50 0 23 0 0 0 chr18 7467332 7467355 -79210193 + AT_rich Low_complexity Low_complexity 1 23 0 405 289 66 0 chr18 7467982 7468134 -79209414 + FRAM SINE Alu 1 161 -15 207 0 0 0 chr18 7468142 7468165 -79209383 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 25 65 0 0 chr18 7468669 7468715 -79208833 + AT_rich Low_complexity Low_complexity 1 46 0 305 318 73 69 chr18 7471289 7471534 -79206014 - L1MB7 LINE L1 -78 6106 5861 244 224 14 75 chr18 7472069 7472216 -79205332 - L1MB7 LINE L1 -768 5410 5273 31 0 0 0 chr18 7472870 7472901 -79204647 + AT_rich Low_complexity Low_complexity 1 31 0 320 185 66 13 chr18 7472909 7473060 -79204488 + (TA)n Simple_repeat Simple_repeat 2 160 0 477 294 79 25 chr18 7473414 7473841 -79203707 - L1PB2 LINE L1 -233 5918 5445 385 295 59 15 chr18 7473997 7474280 -79203268 - L1ME LINE L1 -734 5432 5141 429 20 0 0 chr18 7474905 7474955 -79202593 + (TG)n Simple_repeat Simple_repeat 1 50 0 283 203 29 14 chr18 7475963 7476032 -79201516 + (TG)n Simple_repeat Simple_repeat 1 70 0 24 32 0 0 chr18 7476710 7476741 -79200807 + AT_rich Low_complexity Low_complexity 1 31 0 27 49 0 0 chr18 7477360 7477401 -79200147 + AT_rich Low_complexity Low_complexity 1 41 0 408 253 97 23 chr18 7477405 7477705 -79199843 - L1ME LINE L1 -1316 4830 4509 21 0 0 0 chr18 7478383 7478404 -79199144 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr18 7478810 7478833 -79198715 + AT_rich Low_complexity Low_complexity 1 23 0 372 133 0 0 chr18 7479191 7479251 -79198297 + (T)n Simple_repeat Simple_repeat 1 60 0 23 33 0 0 chr18 7479644 7479674 -79197874 + AT_rich Low_complexity Low_complexity 1 30 0 308 237 30 96 chr18 7480798 7480933 -79196615 + AluSq/x SINE Alu 2 105 -198 660 118 0 0 chr18 7481241 7481368 -79196180 + (TAGA)n Simple_repeat Simple_repeat 4 130 0 353 212 61 91 chr18 7481992 7482124 -79195424 - FLAM_C SINE Alu -2 131 4 228 342 137 0 chr18 7482392 7482509 -79195039 + MIR3 SINE MIR 52 184 -24 24 67 0 0 chr18 7482766 7482811 -79194737 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr18 7484179 7484201 -79193347 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr18 7485425 7485448 -79192100 + AT_rich Low_complexity Low_complexity 1 23 0 248 296 92 0 chr18 7485563 7485661 -79191887 + AluSp SINE Alu 5 111 -192 186 241 52 35 chr18 7485735 7485793 -79191755 + MIR SINE MIR 6 64 -198 571 178 142 12 chr18 7486205 7486374 -79191174 + AluJo SINE Alu 120 310 -2 212 0 36 0 chr18 7486812 7486840 -79190708 + (TTG)n Simple_repeat Simple_repeat 2 30 0 180 0 0 0 chr18 7487775 7487795 -79189753 + (CACAG)n Simple_repeat Simple_repeat 3 22 0 359 231 9 0 chr18 7489761 7489869 -79187679 + (CA)n Simple_repeat Simple_repeat 2 110 0 255 157 0 0 chr18 7489872 7489923 -79187625 - MER4-int LTR ERV1 -5436 1162 1112 399 202 0 0 chr18 7489923 7490017 -79187531 + (CA)n Simple_repeat Simple_repeat 1 94 0 282 56 0 0 chr18 7490403 7490439 -79187109 + (ATTG)n Simple_repeat Simple_repeat 1 36 0 1286 101 10 3 chr18 7492684 7492981 -79184567 + (GAAA)n Simple_repeat Simple_repeat 2 300 0 276 316 149 44 chr18 7493840 7494613 -79182935 + L2 LINE L2 1299 2152 -1162 299 319 71 53 chr18 7494878 7495104 -79182444 + L2 LINE L2 2070 2299 -1015 1780 249 13 9 chr18 7496301 7496832 -79180716 + L1MA4 LINE L1 5398 5930 -370 27 0 0 0 chr18 7497485 7497512 -79180036 + AT_rich Low_complexity Low_complexity 1 27 0 282 56 0 0 chr18 7497527 7497563 -79179985 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 215 161 65 48 chr18 7497783 7497845 -79179703 - MIR SINE MIR -194 68 6 206 239 0 30 chr18 7499041 7499108 -79178440 + (AGCTG)n Simple_repeat Simple_repeat 2 66 0 235 200 29 29 chr18 7499606 7499676 -79177872 + (TATG)n Simple_repeat Simple_repeat 3 72 0 312 27 0 0 chr18 7500429 7500466 -79177082 + (CA)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr18 7500563 7500596 -79176952 + AT_rich Low_complexity Low_complexity 1 33 0 21 57 0 0 chr18 7500826 7500861 -79176687 + AT_rich Low_complexity Low_complexity 1 35 0 588 305 79 10 chr18 7500875 7501303 -79176245 - L1MC1 LINE L1 -197 6136 5674 203 0 37 0 chr18 7503380 7503407 -79174141 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1344 290 88 25 chr18 7504208 7505022 -79172526 + L1PB4 LINE L1 4478 5343 -803 504 284 27 50 chr18 7505028 7505327 -79172221 + L1PB4 LINE L1 5417 5708 -453 336 24 0 0 chr18 7505351 7505392 -79172156 + (TTGG)n Simple_repeat Simple_repeat 4 44 0 371 279 14 58 chr18 7505458 7505666 -79171882 + L1PB4 LINE L1 5732 5930 -226 458 75 15 0 chr18 7507396 7507463 -79170085 + (CA)n Simple_repeat Simple_repeat 2 69 0 237 250 0 56 chr18 7510491 7510563 -79166985 + L1MD2 LINE L1 6203 6270 -89 288 0 0 0 chr18 7511732 7511764 -79165784 + (CA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr18 7512202 7512223 -79165325 + AT_rich Low_complexity Low_complexity 1 21 0 272 244 20 26 chr18 7514966 7515071 -79162477 + AluSp SINE Alu 137 202 -101 1181 105 0 6 chr18 7515111 7515157 -79162391 + (GGAA)n Simple_repeat Simple_repeat 1 225 0 1181 105 0 6 chr18 7515157 7515338 -79162210 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 315 0 0 0 chr18 7516276 7516311 -79161237 + (TA)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr18 7517088 7517113 -79160435 + AT_rich Low_complexity Low_complexity 1 25 0 231 36 0 0 chr18 7519455 7519483 -79158065 + (T)n Simple_repeat Simple_repeat 1 28 0 380 272 16 0 chr18 7521269 7521394 -79156154 + L1MC3 LINE L1 6963 7089 -696 262 256 11 0 chr18 7524460 7524550 -79152998 - L1MA7 LINE L1 -4 6287 6197 222 135 0 58 chr18 7525038 7525090 -79152458 + (TTTTA)n Simple_repeat Simple_repeat 1 49 0 22 80 0 0 chr18 7525290 7525340 -79152208 + AT_rich Low_complexity Low_complexity 1 50 0 216 0 0 0 chr18 7529519 7529543 -79148005 + (CAA)n Simple_repeat Simple_repeat 1 24 0 225 250 16 0 chr18 7531783 7531847 -79145701 + CT-rich Low_complexity Low_complexity 3 67 0 231 204 0 0 chr18 7531874 7531928 -79145620 + (TG)n Simple_repeat Simple_repeat 2 55 0 376 347 106 15 chr18 7532695 7533101 -79144447 + L1M2 LINE L1 1635 2077 -4772 22 0 0 0 chr18 7534405 7534427 -79143121 + AT_rich Low_complexity Low_complexity 1 22 0 221 346 167 11 chr18 7536321 7536584 -79140964 + L2 LINE L2 2481 2784 -530 191 233 163 23 chr18 7537132 7537218 -79140330 + L2 LINE L2 3158 3255 -58 180 245 38 19 chr18 7537996 7538049 -79139499 + L2 LINE L2 396 449 -2865 234 0 0 0 chr18 7538216 7538242 -79139306 + (A)n Simple_repeat Simple_repeat 1 26 0 279 268 0 0 chr18 7539466 7539537 -79138011 - L1MA5 LINE L1 -48 6252 6182 1170 85 0 0 chr18 7539590 7539767 -79137781 + (TG)n Simple_repeat Simple_repeat 1 177 0 332 318 52 32 chr18 7539877 7540229 -79137319 - L1MA4 LINE L1 -305 5995 5631 22 0 0 0 chr18 7540462 7540484 -79137064 + AT_rich Low_complexity Low_complexity 1 22 0 329 268 37 0 chr18 7540643 7540725 -79136823 - L1MA4 LINE L1 -817 5329 5245 308 257 119 37 chr18 7540725 7540834 -79136714 + L1 LINE L1 5089 5206 -940 288 0 0 0 chr18 7543166 7543198 -79134350 + (TA)n Simple_repeat Simple_repeat 2 33 0 243 125 0 0 chr18 7543201 7543241 -79134307 + (TAGA)n Simple_repeat Simple_repeat 2 41 0 210 150 0 0 chr18 7543245 7543285 -79134263 + (TA)n Simple_repeat Simple_repeat 2 41 0 258 95 0 0 chr18 7543287 7543329 -79134219 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 290 329 54 7 chr18 7543787 7543936 -79133612 - Tigger4(Zombi) DNA MER2_type -17 2714 2559 232 260 41 0 chr18 7545371 7545444 -79132104 - L1MA4 LINE L1 -1455 4691 4616 41 48 0 0 chr18 7548137 7548199 -79129349 + AT_rich Low_complexity Low_complexity 1 62 0 180 0 0 0 chr18 7548543 7548563 -79128985 + (TG)n Simple_repeat Simple_repeat 1 20 0 * 450 0 0 0 chr18 7548562 7548612 -79128936 + (GA)n Simple_repeat Simple_repeat 1 50 0 342 0 0 0 chr18 7549095 7549133 -79128415 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 261 139 0 0 chr18 7549168 7549211 -79128337 + (GGA)n Simple_repeat Simple_repeat 3 45 0 250 205 123 74 chr18 7549577 7549699 -79127849 + FLAM_C SINE Alu 2 129 -4 863 270 46 48 chr18 7549991 7550424 -79127124 + L1MB2 LINE L1 5631 6062 -109 420 155 60 12 chr18 7550962 7551130 -79126418 + (TA)n Simple_repeat Simple_repeat 2 177 0 192 77 0 0 chr18 7551685 7551711 -79125837 + (T)n Simple_repeat Simple_repeat 1 26 0 240 203 0 17 chr18 7551817 7551876 -79125672 - tRNA-Lys-AAA tRNA tRNA -13 63 6 776 290 47 28 chr18 7551885 7552357 -79125191 - L1 LINE L1 -1189 4957 4477 265 237 45 41 chr18 7552715 7552883 -79124665 + AluSp SINE Alu 133 191 -112 839 301 20 7 chr18 7553380 7553686 -79123862 - L1 LINE L1 -1891 4255 3946 23 33 0 0 chr18 7554031 7554061 -79123487 + AT_rich Low_complexity Low_complexity 1 30 0 676 372 23 8 chr18 7554211 7554690 -79122858 - L1 LINE L1 -2204 3942 3457 377 252 69 59 chr18 7554728 7554916 -79122632 + L1M2 LINE L1 5390 5579 -599 345 269 86 41 chr18 7655360 7655605 -79021943 - L1ME LINE L1 -327 5794 5539 364 283 101 19 chr18 7655626 7655785 -79021763 - L1ME LINE L1 -2317 5491 5320 2286 112 0 0 chr18 7657893 7658198 -79019350 + AluSq SINE Alu 1 305 -8 2276 87 0 13 chr18 7659063 7659363 -79018185 + AluY SINE Alu 1 296 -15 369 250 0 107 chr18 7660040 7660236 -79017312 + C-rich Low_complexity Low_complexity 3 177 0 797 277 99 47 chr18 7660283 7660962 -79016586 + L2 LINE L2 2545 3312 -1 214 167 0 62 chr18 7660995 7661043 -79016505 + L2 LINE L2 3222 3266 -6 248 333 11 11 chr18 7661171 7661258 -79016290 + MIR SINE MIR 1 87 -175 210 91 0 0 chr18 7661428 7661461 -79016087 + (CA)n Simple_repeat Simple_repeat 2 34 0 819 152 0 0 chr18 7663606 7663731 -79013817 - FLAM_A SINE Alu -6 127 3 30 45 0 0 chr18 7665000 7665044 -79012504 + AT_rich Low_complexity Low_complexity 1 44 0 279 258 0 0 chr18 7666450 7666516 -79011032 + MER82 DNA MER2_type 587 652 -1 264 325 83 25 chr18 7668038 7668195 -79009353 - L3 LINE CR1 -299 1278 1113 205 132 0 75 chr18 7668445 7668498 -79009050 + (TTTTG)n Simple_repeat Simple_repeat 2 50 0 1455 152 63 41 chr18 7669245 7669478 -79008070 + AluSx SINE Alu 37 278 -34 207 0 0 0 chr18 7669478 7669501 -79008047 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1455 152 63 41 chr18 7669501 7669536 -79008012 + AluSx SINE Alu 278 311 -1 1815 144 0 77 chr18 7669644 7669970 -79007578 + AluSx SINE Alu 1 301 -11 216 286 22 33 chr18 7671842 7671933 -79005615 - MIR SINE MIR -91 171 82 2477 86 3 3 chr18 7671962 7672275 -79005273 - AluSq SINE Alu 0 313 1 22 35 0 0 chr18 7673009 7673038 -79004510 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18 7673675 7673696 -79003852 + AT_rich Low_complexity Low_complexity 1 21 0 624 222 161 0 chr18 7673951 7674113 -79003435 + MER5A DNA MER1_type 2 189 0 1895 118 0 93 chr18 7675905 7676228 -79001320 - AluSx SINE Alu -19 293 1 265 307 93 20 chr18 7676374 7676524 -79001024 + MIR SINE MIR 12 172 -90 23 20 0 61 chr18 7676568 7676617 -79000931 + AT_rich Low_complexity Low_complexity 1 46 0 187 262 0 33 chr18 7679049 7679110 -78998438 - MER5A DNA MER1_type -118 71 13 218 306 0 0 chr18 7683445 7683507 -78994041 + CT-rich Low_complexity Low_complexity 1 62 0 2304 128 8 28 chr18 7685298 7685688 -78991860 + L1PB3 LINE L1 5773 6154 0 331 310 122 30 chr18 7685699 7685896 -78991652 - MIR SINE MIR 0 262 48 231 295 32 53 chr18 7687424 7687519 -78990029 + L3 LINE CR1 1484 1576 -1 211 341 206 25 chr18 7689530 7690299 -78987249 + L2 LINE L2 1697 2604 -710 840 183 22 28 chr18 7690791 7690971 -78986577 - AluJo SINE Alu -14 298 120 225 0 0 0 chr18 7691292 7691317 -78986231 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2342 62 0 33 chr18 7691537 7691841 -78985707 - AluY SINE Alu -17 294 1 21 36 0 0 chr18 7691849 7691877 -78985671 + AT_rich Low_complexity Low_complexity 1 28 0 583 182 83 25 chr18 7692545 7692739 -78984809 - MIR SINE MIR 0 262 7 22 35 0 0 chr18 7692969 7692998 -78984550 + AT_rich Low_complexity Low_complexity 1 29 0 199 292 108 58 chr18 7694069 7694189 -78983359 + L2 LINE L2 3179 3304 -9 1514 178 34 10 chr18 7694344 7694642 -78982906 - AluJo SINE Alu -7 305 1 222 37 0 0 chr18 7695424 7695451 -78982097 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 7081 113 57 15 chr18 7698205 7699387 -78978161 + Tigger3b DNA MER2_type 1 1231 0 2594 58 0 0 chr18 7700083 7700394 -78977154 - AluY SINE Alu 0 311 1 1412 191 47 47 chr18 7700660 7701021 -78976527 + MLT1A1 LTR MaLR 5 365 0 466 362 5 27 chr18 7703596 7703781 -78973767 - MER5A DNA MER1_type -7 182 2 1508 181 0 51 chr18 7704428 7704721 -78972827 - AluJo SINE Alu -18 294 17 2622 30 3 0 chr18 7705008 7705309 -78972239 - AluY SINE Alu -9 302 1 2218 133 3 12 chr18 7706785 7707123 -78970425 + MER1B DNA MER1_type 1 335 -2 248 314 66 0 chr18 7708271 7708392 -78969156 + MIR SINE MIR 134 262 0 216 0 0 0 chr18 7708570 7708594 -78968954 + (T)n Simple_repeat Simple_repeat 1 24 0 186 118 0 0 chr18 7708658 7708692 -78968856 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 239 386 8 23 chr18 7709113 7709245 -78968303 + MIR3 SINE MIR 27 156 -52 357 271 35 7 chr18 7709289 7709433 -78968115 - MER117 DNA MER1_type -49 148 1 3542 146 31 98 chr18 7710137 7710974 -78966574 + L1MC2 LINE L1 5167 5830 -514 1791 128 29 58 chr18 7710974 7711319 -78966229 - MER44D DNA MER2_type -4 605 1 3542 146 31 98 chr18 7711319 7711792 -78965756 + L1MC2 LINE L1 5830 6333 -11 25 31 0 0 chr18 7711824 7711856 -78965692 + AT_rich Low_complexity Low_complexity 1 32 0 1332 222 56 55 chr18 7711959 7712544 -78965004 - L1MC5 LINE L1 -453 7508 6923 238 271 102 107 chr18 7712957 7713065 -78964483 - MER5B DNA MER1_type -1 177 69 1795 133 10 20 chr18 7713065 7713365 -78964183 - AluSx SINE Alu -15 297 1 238 271 102 107 chr18 7713365 7713433 -78964115 - MER5B DNA MER1_type -109 69 2 977 180 48 29 chr18 7713600 7713806 -78963742 - AluJo SINE Alu -16 296 87 207 0 0 0 chr18 7714004 7714027 -78963521 + (TG)n Simple_repeat Simple_repeat 2 24 0 225 108 0 0 chr18 7715462 7715499 -78962049 + (T)n Simple_repeat Simple_repeat 1 37 0 624 257 81 24 chr18 7716219 7716429 -78961119 + MIR SINE MIR 41 262 0 557 254 0 0 chr18 7720425 7720547 -78957001 + FLAM_A SINE Alu 3 124 -9 1540 187 23 0 chr18 7721171 7721476 -78956072 - L1PA16 LINE L1 -2 6164 5853 216 215 46 15 chr18 7721721 7721786 -78955762 + (TATATG)n Simple_repeat Simple_repeat 3 69 0 910 316 76 36 chr18 7723932 7724574 -78952974 + L2 LINE L2 2094 2761 -553 918 280 72 42 chr18 7724578 7725146 -78952402 + MLT1E3 LTR MaLR 1 585 -39 194 188 266 16 chr18 7726912 7726976 -78950572 - MIR SINE MIR -65 197 118 6710 181 126 39 chr18 7729033 7729928 -78947620 + MER52A LTR ERV1 2 818 -937 1905 109 8 11 chr18 7729928 7730235 -78947313 + AluSx SINE Alu 46 312 0 6710 181 126 39 chr18 7730235 7730953 -78946595 + MER52A LTR ERV1 818 1755 0 2274 99 0 20 chr18 7731026 7731330 -78946218 - AluSg SINE Alu -12 298 1 401 276 135 18 chr18 7731356 7731526 -78946022 + MIR3 SINE MIR 17 206 -2 21 57 0 0 chr18 7732497 7732532 -78945016 + AT_rich Low_complexity Low_complexity 1 35 0 2498 61 0 0 chr18 7734392 7734687 -78942861 + AluY SINE Alu 1 295 -16 528 296 179 28 chr18 7735244 7735636 -78941912 - L3 LINE CR1 -21 1556 1106 322 346 82 13 chr18 7735667 7735826 -78941722 - MIR SINE MIR -12 250 81 518 342 36 73 chr18 7735902 7736378 -78941170 - L3 LINE CR1 -517 1060 603 212 282 56 28 chr18 7736572 7736643 -78940905 - L3 LINE CR1 -1038 539 467 328 319 96 0 chr18 7740833 7740968 -78936580 - MIR SINE MIR -70 192 45 311 321 95 18 chr18 7741040 7741208 -78936340 - MIR3 SINE MIR -8 200 20 5605 183 66 22 chr18 7741642 7743615 -78933933 + L1MA4 LINE L1 12 2034 -4065 201 147 0 0 chr18 7743618 7743652 -78933896 + (TG)n Simple_repeat Simple_repeat 2 35 0 11625 168 21 11 chr18 7743818 7747116 -78930432 + L1MA4 LINE L1 3021 6344 -9 2805 38 21 0 chr18 7747546 7747934 -78929614 + L1PA7 LINE L1 5791 6185 0 356 231 29 48 chr18 7748101 7748205 -78929343 + L3b LINE CR1 1387 1488 -95 28 29 0 0 chr18 7748413 7748448 -78929100 + GC_rich Low_complexity Low_complexity 1 35 0 230 302 0 75 chr18 7749322 7749428 -78928120 + MIR3 SINE MIR 96 193 -15 22 35 0 0 chr18 7749733 7749762 -78927786 + AT_rich Low_complexity Low_complexity 1 29 0 198 357 31 23 chr18 7750185 7750314 -78927234 - L2 LINE L2 -4 3268 3139 2147 126 0 0 chr18 7751364 7751657 -78925891 + AluSx SINE Alu 1 293 -19 334 287 216 43 chr18 7752973 7753650 -78923898 + L2 LINE L2 1711 2504 -810 2070 126 3 43 chr18 7753702 7754028 -78923520 + AluSq SINE Alu 1 313 0 21 0 0 0 chr18 7754724 7754745 -78922803 + AT_rich Low_complexity Low_complexity 1 21 0 202 200 95 42 chr18 7755046 7755141 -78922407 + MIR SINE MIR 17 116 -92 561 295 214 12 chr18 7756127 7756713 -78920835 - L2 LINE L2 0 3313 2594 288 0 0 0 chr18 7757598 7757630 -78919918 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 24 53 0 0 chr18 7759524 7759562 -78917986 + AT_rich Low_complexity Low_complexity 1 38 0 331 270 36 27 chr18 7759749 7759860 -78917688 + MER5B DNA MER1_type 60 171 -7 250 227 40 40 chr18 7759862 7759937 -78917611 + MER5A DNA MER1_type 115 189 0 349 255 180 19 chr18 7760958 7761119 -78916429 + MIR SINE MIR 64 250 -12 2356 95 0 3 chr18 7761941 7762247 -78915301 + AluSg SINE Alu 1 305 -5 289 219 16 0 chr18 7764031 7764095 -78913453 - L1M4 LINE L1 -1298 4848 4784 279 0 0 0 chr18 7764847 7764878 -78912670 + (T)n Simple_repeat Simple_repeat 1 31 0 253 279 15 177 chr18 7765561 7765826 -78911722 - L2 LINE L2 -31 3241 3020 272 245 0 0 chr18 7766550 7766603 -78910945 + MLT1I LTR MaLR 25 77 -332 316 282 58 0 chr18 7766648 7766751 -78910797 + MLT1I LTR MaLR 293 401 -8 515 295 48 80 chr18 7766993 7767244 -78910304 + MIR SINE MIR 1 243 -19 352 164 60 103 chr18 7770521 7770637 -78906911 + L2 LINE L2 3202 3312 -1 1981 152 3 7 chr18 7770897 7771193 -78906355 - AluSx SINE Alu -17 295 1 364 257 211 28 chr18 7771231 7771449 -78906099 + L2 LINE L2 1955 2212 -1102 605 272 141 38 chr18 7771451 7772106 -78905442 + L2 LINE L2 2589 3313 0 23 0 0 0 chr18 7774008 7774031 -78903517 + AT_rich Low_complexity Low_complexity 1 23 0 265 376 48 16 chr18 7774194 7774319 -78903229 + MIR3 SINE MIR 61 189 -19 424 326 56 11 chr18 7775005 7775183 -78902365 + MIR SINE MIR 3 188 -74 523 179 111 34 chr18 7775197 7775314 -78902234 + L2 LINE L2 3188 3313 0 1984 118 0 65 chr18 7775547 7775879 -78901669 - AluSx SINE Alu 0 312 1 318 175 0 0 chr18 7776297 7776354 -78901194 + L2 LINE L2 3257 3313 0 1860 140 50 0 chr18 7776972 7777250 -78900298 + AluSp SINE Alu 1 292 -21 212 208 0 14 chr18 7777394 7777466 -78900082 + (TA)n Simple_repeat Simple_repeat 2 72 0 573 203 68 0 chr18 7777479 7777612 -78899936 - MIR SINE MIR -52 210 69 2254 105 3 3 chr18 7777646 7777950 -78899598 - AluSq SINE Alu -9 304 1 364 322 20 13 chr18 7778868 7779017 -78898531 - MIR SINE MIR -56 206 57 613 287 133 19 chr18 7780934 7781303 -78896245 - L2 LINE L2 -19 3294 2884 1882 132 0 30 chr18 7781623 7781919 -78895629 - AluJb SINE Alu -12 300 14 2134 132 7 0 chr18 7782050 7782353 -78895195 - AluSx SINE Alu -7 305 1 369 0 0 0 chr18 7783380 7783421 -78894127 + (TG)n Simple_repeat Simple_repeat 2 42 0 183 352 35 28 chr18 7783446 7783591 -78893957 + L2 LINE L2 2467 2612 -702 445 270 35 46 chr18 7784829 7784900 -78892648 - MER69A DNA AcHobo -2349 177 107 2140 131 0 28 chr18 7784900 7785220 -78892328 + AluSx SINE Alu 1 311 -1 445 270 35 46 chr18 7785220 7785322 -78892226 - MER69A DNA AcHobo -2419 107 6 277 324 102 0 chr18 7785445 7785553 -78891995 - L2 LINE L2 -4 3268 3150 411 244 0 0 chr18 7785762 7785844 -78891704 + L2 LINE L2 3190 3271 -1 22 56 0 0 chr18 7786457 7786493 -78891055 + AT_rich Low_complexity Low_complexity 1 36 0 2375 84 3 0 chr18 7787341 7787651 -78889897 + AluY SINE Alu 1 311 0 442 317 18 18 chr18 7787812 7787979 -78889569 + MER5A DNA MER1_type 1 167 -22 1298 174 34 30 chr18 7788436 7788701 -78888847 + MER1B DNA MER1_type 56 321 -18 245 91 0 0 chr18 7788737 7788770 -78888778 + MER1B DNA MER1_type 297 329 0 21 0 0 0 chr18 7789957 7789978 -78887570 + AT_rich Low_complexity Low_complexity 1 21 0 1831 102 0 95 chr18 7789978 7790321 -78887227 + AluSx SINE Alu 1 313 0 608 275 85 5 chr18 7790420 7790620 -78886928 - MIR SINE MIR -13 249 34 959 251 76 11 chr18 7791447 7791832 -78885716 - HsTC2 DNA Tc2 0 1900 1282 341 164 14 27 chr18 7791891 7791964 -78885584 - HsTC2 DNA Tc2 -1826 72 1 207 0 0 0 chr18 7792454 7792477 -78885071 + (T)n Simple_repeat Simple_repeat 1 23 0 180 302 104 21 chr18 7792519 7792615 -78884933 - L2 LINE L2 -8 3305 3202 231 36 0 0 chr18 7792704 7792732 -78884816 + (TC)n Simple_repeat Simple_repeat 2 29 0 2687 20 0 3 chr18 7794262 7794561 -78882987 + AluY SINE Alu 2 299 -12 1218 127 0 0 chr18 7794563 7794736 -78882812 + AluSg/x SINE Alu 135 307 -5 21 36 0 0 chr18 7795054 7795082 -78882466 + AT_rich Low_complexity Low_complexity 1 28 0 325 327 57 90 chr18 7796361 7796884 -78880664 + L1M2 LINE L1 749 1254 -5595 226 169 13 52 chr18 7797121 7797198 -78880350 + (CGGG)n Simple_repeat Simple_repeat 3 76 0 24 0 0 0 chr18 7797200 7797224 -78880324 + GC_rich Low_complexity Low_complexity 1 24 0 30 21 0 21 chr18 7798132 7798151 -78879397 + AT_rich Low_complexity Low_complexity 1 19 -28 1629 81 89 4 chr18 7798151 7798398 -78879150 + L1MA2 LINE L1 6037 6304 0 30 21 0 21 chr18 7798398 7798426 -78879122 + AT_rich Low_complexity Low_complexity 19 47 0 543 239 68 68 chr18 7798426 7798648 -78878900 - L1MA9 LINE L1 -30 6282 6061 251 337 66 46 chr18 7799026 7799222 -78878326 - L2 LINE L2 -554 2760 2561 405 0 0 0 chr18 7799332 7799377 -78878171 + (TG)n Simple_repeat Simple_repeat 2 46 0 2258 100 3 7 chr18 7799709 7800019 -78877529 + AluSg1 SINE Alu 1 309 0 187 261 87 76 chr18 7802873 7802965 -78874583 + L3 LINE CR1 623 715 -862 526 289 38 19 chr18 7803067 7803226 -78874322 + MER5A DNA MER1_type 28 189 0 399 323 123 0 chr18 7803995 7804190 -78873358 + L3 LINE CR1 1345 1563 -14 290 105 0 88 chr18 7804834 7804891 -78872657 + MER5B DNA MER1_type 3 54 -124 1908 145 17 0 chr18 7804903 7805192 -78872356 + AluJb SINE Alu 1 294 -18 301 161 81 46 chr18 7805204 7805291 -78872257 + L1MC5 LINE L1 7828 7917 -44 546 279 16 8 chr18 7805312 7805441 -78872107 + MER5B DNA MER1_type 46 175 -3 627 308 20 24 chr18 7806113 7806363 -78871185 - MIR SINE MIR -2 260 12 252 170 21 0 chr18 7806401 7806448 -78871100 + MER116 DNA Mariner 5 52 -28 22 0 0 0 chr18 7806655 7806677 -78870871 + AT_rich Low_complexity Low_complexity 1 22 0 841 238 75 29 chr18 7806680 7806920 -78870628 - MIR SINE MIR -10 252 2 838 239 187 36 chr18 7807087 7807797 -78869751 + L2 LINE L2 2494 3313 0 283 291 51 43 chr18 7808836 7808953 -78868595 + L2 LINE L2 3138 3255 -17 278 278 45 40 chr18 7808975 7809151 -78868397 + L2 LINE L2 2405 2581 -733 470 227 78 16 chr18 7809473 7809601 -78867947 + L2 LINE L2 3178 3313 0 319 239 128 50 chr18 7810165 7810345 -78867203 + MIR SINE MIR 21 214 -48 2059 134 3 7 chr18 7810837 7811143 -78866405 - AluSx SINE Alu -5 307 3 419 259 195 11 chr18 7811473 7811647 -78865901 - MIR SINE MIR 0 262 57 570 253 96 75 chr18 7812013 7812254 -78865294 + MIR SINE MIR 17 262 0 2405 43 0 0 chr18 7814391 7814715 -78862833 - AluY SINE Alu 0 324 1 3542 221 47 14 chr18 7814751 7815757 -78861791 + L1MC4a LINE L1 6198 6359 0 501 309 44 18 chr18 7815854 7816090 -78861458 + MIR SINE MIR 8 252 -10 305 351 146 20 chr18 7816539 7816881 -78860667 - L2 LINE L2 -338 2976 2592 264 280 64 96 chr18 7817139 7817357 -78860191 - L2 LINE L2 -878 2436 2226 204 294 123 44 chr18 7817436 7817664 -78859884 - L2 LINE L2 -1282 2032 1787 213 329 129 21 chr18 7817682 7817822 -78859726 - MIR SINE MIR 0 262 108 250 304 0 22 chr18 7818452 7818544 -78859004 + Charlie2 DNA MER1_type 2 91 -2691 1816 140 0 51 chr18 7818553 7818867 -78858681 + AluSx SINE Alu 1 298 -14 3118 24 7 51 chr18 7818897 7819307 -78858241 - L1PA4 LINE L1 0 6155 5764 6791 25 5 0 chr18 7819307 7820142 -78857406 + L1P LINE L1 3893 4731 -1415 797 62 0 9 chr18 7820144 7820257 -78857291 + (CTATT)n Simple_repeat Simple_repeat 4 115 0 1869 136 7 7 chr18 7820257 7820543 -78857005 - AluSx SINE Alu -24 288 3 246 240 0 0 chr18 7821001 7821051 -78856497 + GA-rich Low_complexity Low_complexity 4 53 0 441 54 0 0 chr18 7821053 7821109 -78856439 + (GGAA)n Simple_repeat Simple_repeat 3 58 0 2021 217 69 14 chr18 7821112 7821780 -78855768 + Charlie2 DNA MER1_type 2157 2861 -1 189 0 0 0 chr18 7821867 7821888 -78855660 + (A)n Simple_repeat Simple_repeat 1 21 0 210 91 0 0 chr18 7824010 7824043 -78853505 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 1258 26 0 7 chr18 7824045 7824198 -78853350 - L1PA5 LINE L1 -3 6151 6000 2009 137 0 13 chr18 7825998 7826304 -78851244 - AluJo SINE Alu -1 311 10 23 0 0 0 chr18 7827176 7827199 -78850349 + AT_rich Low_complexity Low_complexity 1 23 0 1207 92 0 0 chr18 7827353 7827505 -78850043 - AluSg/x SINE Alu -15 297 146 21 0 0 0 chr18 7827505 7827526 -78850022 + AT_rich Low_complexity Low_complexity 1 21 0 728 214 0 8 chr18 7827680 7827811 -78849737 - FLAM_A SINE Alu -3 130 1 243 0 0 0 chr18 7827870 7827897 -78849651 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1691 163 58 19 chr18 7828010 7828371 -78849177 + MER68 LTR ERV1 163 537 -25 243 254 55 100 chr18 7828563 7828673 -78848875 + MIR SINE MIR 38 142 -66 2212 180 29 5 chr18 7828685 7828995 -78848553 + MSTB LTR MaLR 1 325 -101 2290 93 0 0 chr18 7828995 7829286 -78848262 + AluSx SINE Alu 1 291 -21 2212 180 29 5 chr18 7829286 7829387 -78848161 + MSTB LTR MaLR 325 422 -4 185 250 81 81 chr18 7831580 7831716 -78845832 - MIR SINE MIR -3 259 124 714 286 64 64 chr18 7831994 7832560 -78844988 + L1ME3 LINE L1 5293 5858 -304 396 286 87 12 chr18 7833395 7833556 -78843992 - MIR SINE MIR -73 189 17 443 297 0 38 chr18 7833609 7833794 -78843754 + (CATA)n Simple_repeat Simple_repeat 2 179 0 * 454 359 0 0 chr18 7833660 7833827 -78843721 + (CA)n Simple_repeat Simple_repeat 2 168 0 397 244 11 11 chr18 7833844 7834020 -78843528 + (CATATA)n Simple_repeat Simple_repeat 1 176 0 180 268 0 0 chr18 7834043 7834114 -78843434 + (CATATA)n Simple_repeat Simple_repeat 6 76 0 2035 139 3 3 chr18 7835154 7835456 -78842092 + AluJo SINE Alu 1 302 -10 316 349 41 14 chr18 7836058 7836204 -78841344 - MIR3 SINE MIR -12 196 47 2141 87 38 0 chr18 7837252 7837541 -78840007 - AluSp SINE Alu -13 300 1 210 289 72 0 chr18 7837920 7838003 -78839545 + MIR SINE MIR 97 185 -77 181 235 0 0 chr18 7838091 7838125 -78839423 + MIR SINE MIR 224 257 -5 1213 132 6 6 chr18 7838779 7838961 -78838587 - AluSg/x SINE Alu -48 262 81 839 243 58 72 chr18 7839103 7839606 -78837942 + LTR33 LTR ERVL 26 521 0 1910 176 0 16 chr18 7839827 7840139 -78837409 - AluJb SINE Alu 0 312 6 1610 97 112 4 chr18 7840754 7841023 -78836525 + MER44D DNA MER2_type 42 609 0 24 67 0 0 chr18 7841870 7841915 -78835633 + AT_rich Low_complexity Low_complexity 1 45 0 290 205 13 0 chr18 7841918 7841996 -78835552 + (TA)n Simple_repeat Simple_repeat 2 80 0 282 171 62 132 chr18 7842050 7842179 -78835369 - MIR SINE MIR -109 153 34 2332 221 49 25 chr18 7843792 7844008 -78833540 + L1ME1 LINE L1 5442 5651 -515 237 33 0 0 chr18 7844008 7844038 -78833510 + (CA)n Simple_repeat Simple_repeat 1 30 0 2332 221 49 25 chr18 7844038 7844455 -78833093 + L1ME1 LINE L1 5651 6090 -76 24 0 0 0 chr18 7844491 7844515 -78833033 + AT_rich Low_complexity Low_complexity 1 24 0 2152 167 6 6 chr18 7844676 7845041 -78832507 - MLT1A1 LTR MaLR 0 365 1 2170 112 0 0 chr18 7845614 7845899 -78831649 - AluSg SINE Alu -17 293 9 217 366 61 0 chr18 7846449 7846531 -78831017 - MER5B DNA MER1_type -18 160 74 7313 90 11 2 chr18 7846698 7847746 -78829802 - MER11C LTR ERVK -14 1057 1 643 187 53 7 chr18 7849658 7849808 -78827740 - MER5A DNA MER1_type -31 158 2 192 257 88 71 chr18 7849808 7849893 -78827655 - MIR3 SINE MIR -48 160 74 30 0 0 0 chr18 7850297 7850327 -78827221 + AT_rich Low_complexity Low_complexity 1 30 0 616 167 0 18 chr18 7850410 7850524 -78827024 + FLAM_A SINE Alu 28 139 -3 196 348 14 0 chr18 7851450 7851519 -78826029 - MIR SINE MIR -95 113 44 1872 170 32 38 chr18 7851532 7852052 -78825496 + Charlie1 DNA MER1_type 1 2757 -4 280 335 215 11 chr18 7852512 7852703 -78824845 + MIR SINE MIR 23 252 -10 2668 119 29 7 chr18 7852885 7853304 -78824244 + MSTA LTR MaLR 1 428 0 1649 145 48 15 chr18 7855914 7856183 -78821365 - AluJo SINE Alu -29 283 6 1606 147 81 28 chr18 7857045 7857330 -78820218 + AluJo SINE Alu 1 300 -12 363 211 0 0 chr18 7857448 7857538 -78820010 + (CA)n Simple_repeat Simple_repeat 1 90 0 2135 138 7 0 chr18 7857902 7858200 -78819348 - AluSx SINE Alu -12 300 1 1201 261 11 23 chr18 7858331 7858684 -78818864 + LTR16A LTR ERVL 1 349 -101 1185 168 21 139 chr18 7858832 7859171 -78818377 - AluSx SINE Alu -3 299 1 522 57 0 0 chr18 7860329 7860399 -78817149 + (TC)n Simple_repeat Simple_repeat 1 70 0 194 313 112 28 chr18 7860606 7860785 -78816763 - L2 LINE L2 -556 2758 2565 314 335 81 11 chr18 7861420 7861605 -78815943 + MIR SINE MIR 29 226 -36 2012 158 80 2 chr18 7864594 7864992 -78812556 + L1MB2 LINE L1 5651 6079 -92 1702 146 0 94 chr18 7865087 7865417 -78812131 + AluJo SINE Alu 1 299 -13 394 204 11 0 chr18 7865434 7865527 -78812021 + L1MB2 LINE L1 6072 6165 -6 2253 121 3 0 chr18 7866184 7866481 -78811067 - AluSx SINE Alu -13 299 2 1792 204 62 26 chr18 7866979 7867475 -78810073 + Charlie1b DNA MER1_type 5 518 -5 184 337 84 39 chr18 7867980 7868158 -78809390 + L2 LINE L2 1233 1418 -1896 22 0 0 0 chr18 7868229 7868251 -78809297 + AT_rich Low_complexity Low_complexity 1 22 0 409 108 0 0 chr18 7868819 7868884 -78808664 - L1MA2 LINE L1 0 6304 6240 608 142 92 0 chr18 7868885 7869026 -78808522 + L1MA1 LINE L1 6017 6170 -132 249 254 0 17 chr18 7869073 7869132 -78808416 + L2 LINE L2 3203 3260 -12 515 300 102 13 chr18 7870231 7870544 -78807004 - L1ME3A LINE L1 -312 5858 5518 2527 40 0 0 chr18 7870763 7871060 -78806488 - AluYa5 SINE Alu -14 297 1 23 0 0 0 chr18 7873169 7873192 -78804356 + AT_rich Low_complexity Low_complexity 1 23 0 1898 149 0 7 chr18 7874912 7875200 -78802348 + AluJo SINE Alu 14 299 -13 290 315 137 11 chr18 7875723 7875897 -78801651 - MIR SINE MIR -11 251 53 243 0 0 0 chr18 7876394 7876421 -78801127 + (T)n Simple_repeat Simple_repeat 1 27 0 231 288 14 0 chr18 7876516 7876589 -78800959 - MIR SINE MIR -94 168 95 1799 142 7 30 chr18 7877084 7877380 -78800168 - AluSx SINE Alu -3 309 21 1659 172 28 7 chr18 7877453 7877738 -78799810 - AluJo SINE Alu -21 291 1 211 305 144 17 chr18 7879138 7879256 -78798292 - MIR SINE MIR -20 242 110 23 33 0 0 chr18 7879868 7879898 -78797650 + AT_rich Low_complexity Low_complexity 1 30 0 198 239 141 14 chr18 7880085 7880156 -78797392 - MIR SINE MIR -75 187 108 203 323 39 13 chr18 7880342 7880497 -78797051 + L3 LINE CR1 1189 1347 -230 283 329 0 0 chr18 7880780 7880859 -78796689 + L3 LINE CR1 1391 1469 -108 243 193 250 11 chr18 7881122 7881210 -78796338 - L2 LINE L2 -13 3300 3192 312 27 0 0 chr18 7882020 7882057 -78795491 + (CA)n Simple_repeat Simple_repeat 2 38 0 331 323 118 0 chr18 7883903 7884030 -78793518 + MIR SINE MIR 121 262 0 532 153 133 0 chr18 7884154 7884252 -78793296 + FLAM_C SINE Alu 1 111 -32 29 0 0 0 chr18 7884279 7884308 -78793240 + AT_rich Low_complexity Low_complexity 1 29 0 396 340 83 11 chr18 7884382 7884647 -78792901 - L3 LINE CR1 -200 1377 1094 235 293 0 0 chr18 7884838 7884896 -78792652 + MIR3 SINE MIR 124 181 -27 4161 244 46 57 chr18 7884900 7886497 -78791051 - L1MC4 LINE L1 -3 8039 6460 997 273 126 35 chr18 7886630 7886871 -78790677 + L2 LINE L2 2359 2577 -736 2151 131 0 0 chr18 7886871 7887168 -78790380 - AluSx SINE Alu -15 297 1 997 273 126 35 chr18 7887168 7887777 -78789771 + L2 LINE L2 2577 3313 0 314 265 154 8 chr18 7889106 7889223 -78788325 + MIR SINE MIR 64 197 -65 234 128 0 0 chr18 7889330 7889369 -78788179 + (TCC)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr18 7889518 7889539 -78788009 + AT_rich Low_complexity Low_complexity 1 21 0 344 335 152 28 chr18 7891276 7891908 -78785640 + L2 LINE L2 2516 3212 -60 341 277 107 0 chr18 7891942 7892054 -78785494 + MIR SINE MIR 10 133 -129 264 288 65 65 chr18 7892091 7892170 -78785378 + MIR SINE MIR 124 205 -57 1676 167 141 13 chr18 7892170 7892547 -78785001 + MSTB LTR MaLR 1 425 -1 264 288 65 65 chr18 7892547 7892606 -78784942 + MIR SINE MIR 204 262 0 43 85 0 0 chr18 7892712 7892818 -78784730 + AT_rich Low_complexity Low_complexity 1 106 0 819 131 8 0 chr18 7893672 7893794 -78783754 + FLAM_C SINE Alu 1 123 -10 27 0 0 0 chr18 7894221 7894248 -78783300 + AT_rich Low_complexity Low_complexity 1 27 0 440 149 96 0 chr18 7894818 7894912 -78782636 - L1MB3 LINE L1 -2 6181 6079 270 0 0 0 chr18 7894960 7894990 -78782558 + (TTTTG)n Simple_repeat Simple_repeat 3 32 0 454 226 30 45 chr18 7895999 7896042 -78781506 - Charlie1 DNA MER1_type 0 2761 2719 1965 185 25 3 chr18 7896042 7896399 -78781149 + MLT1A1 LTR MaLR 1 365 0 454 226 30 45 chr18 7896399 7896488 -78781060 - Charlie1 DNA MER1_type -42 2719 2631 899 237 5 5 chr18 7896508 7896702 -78780846 - Charlie1 DNA MER1_type -2567 194 1 210 244 47 105 chr18 7897445 7897531 -78780017 + MIR SINE MIR 63 143 -119 21 0 0 0 chr18 7898951 7898972 -78778576 + AT_rich Low_complexity Low_complexity 1 21 0 2175 121 0 3 chr18 7899086 7899392 -78778156 + AluSx SINE Alu 6 310 -2 401 167 13 0 chr18 7900085 7900163 -78777385 - MADE1 DNA Mariner -1 79 1 512 308 41 19 chr18 7900273 7900490 -78777058 + MIR SINE MIR 12 235 -27 326 215 15 15 chr18 7900836 7900901 -78776647 - MER5A DNA MER1_type -124 65 1 33 0 0 0 chr18 7901375 7901408 -78776140 + AT_rich Low_complexity Low_complexity 1 33 0 5871 145 31 0 chr18 7901428 7902436 -78775112 + Tigger1 DNA MER2_type 1 1039 -1379 1474 182 38 0 chr18 7902451 7902769 -78774779 - L1M4 LINE L1 -979 5167 4838 594 296 96 52 chr18 7902861 7903571 -78773977 - L1ME LINE L1 -5325 745 5 265 309 47 40 chr18 7904470 7904619 -78772929 + MER5B DNA MER1_type 1 150 -28 432 292 65 0 chr18 7906591 7906745 -78770803 + MIR SINE MIR 2 165 -97 478 242 47 8 chr18 7906764 7906892 -78770656 + MIR SINE MIR 108 240 -22 3013 184 32 18 chr18 7907487 7907546 -78770002 - L1MB3 LINE L1 -2 6181 6124 1632 124 42 0 chr18 7907546 7907787 -78769761 - AluSx SINE Alu 0 312 62 3013 184 32 18 chr18 7907787 7908329 -78769219 - L1MB3 LINE L1 -59 6124 5572 2196 111 0 0 chr18 7909063 7909392 -78768156 - AluSx SINE Alu 0 312 1 286 333 61 8 chr18 7910547 7910679 -78766869 - L2 LINE L2 -7 3306 3168 2290 98 7 0 chr18 7911237 7911534 -78766014 + AluSp SINE Alu 1 299 -14 2771 142 73 2 chr18 7911540 7911990 -78765558 - L1MB3 LINE L1 -15 6168 5687 631 172 121 40 chr18 7913072 7913246 -78764302 - MER53 DNA DNA -1 188 1 242 349 61 15 chr18 7914513 7914777 -78762771 + L2 LINE L2 2386 2661 -653 15021 140 41 5 chr18 7916594 7918099 -78759449 - Tigger1 DNA MER2_type 0 2418 798 2265 117 3 0 chr18 7918099 7918407 -78759141 - AluY SINE Alu -2 309 1 15021 140 41 5 chr18 7918407 7919235 -78758313 - Tigger1 DNA MER2_type -1620 798 1 262 292 6 6 chr18 7919392 7919560 -78757988 + (TG)n Simple_repeat Simple_repeat 1 168 0 495 318 15 4 chr18 7919576 7919855 -78757693 + (TG)n Simple_repeat Simple_repeat 1 282 0 189 270 0 0 chr18 7919892 7919981 -78757567 + (TG)n Simple_repeat Simple_repeat 2 90 0 330 318 0 0 chr18 7920003 7920110 -78757438 + (TG)n Simple_repeat Simple_repeat 1 107 0 266 324 10 10 chr18 7920254 7920356 -78757192 + GA-rich Low_complexity Low_complexity 3 104 0 1435 199 57 14 chr18 7920535 7920816 -78756732 + AluJo SINE Alu 1 293 -19 241 341 122 24 chr18 7922303 7922467 -78755081 - MIR SINE MIR -69 193 14 209 235 0 39 chr18 7923590 7923641 -78753907 + (CACG)n Simple_repeat Simple_repeat 2 50 0 202 163 20 20 chr18 7923642 7923691 -78753857 + (TCTA)n Simple_repeat Simple_repeat 2 50 0 22 0 0 0 chr18 7924094 7924116 -78753432 + AT_rich Low_complexity Low_complexity 1 22 0 914 171 50 17 chr18 7924347 7924528 -78753020 - L1PB4 LINE L1 -181 5985 5799 543 232 6 58 chr18 7924528 7924702 -78752846 + L1PB4 LINE L1 6002 6166 0 2672 171 13 4 chr18 7924766 7925239 -78752309 + MER41B LTR ERV1 132 608 -27 507 214 10 0 chr18 7926593 7926691 -78750857 + MER5A DNA MER1_type 14 112 -77 270 111 0 0 chr18 7927331 7927367 -78750181 - tRNA-Asp-GAC tRNA tRNA -39 36 1 2961 216 21 30 chr18 7927367 7928076 -78749472 + L1MA9 LINE L1 5585 6287 -25 553 279 78 27 chr18 7928214 7928472 -78749076 + MLT1J2 LTR MaLR 1 271 -179 1102 179 74 0 chr18 7928497 7928687 -78748861 + MER20 DNA MER1_type 16 219 0 360 298 117 0 chr18 7928687 7928857 -78748691 + MLT1J2 LTR MaLR 257 446 -4 191 258 108 32 chr18 7929439 7929532 -78748016 - MIR SINE MIR -70 138 39 545 319 37 11 chr18 7931266 7931454 -78746094 + MIR SINE MIR 56 248 -14 456 325 131 45 chr18 7931524 7931791 -78745757 + L2 LINE L2 2515 2832 -482 3204 92 18 22 chr18 7931791 7932237 -78745311 - MLT2A1 LTR ERVL 0 444 1 456 325 131 45 chr18 7932237 7932390 -78745158 + L2 LINE L2 2832 2971 -343 22853 34 0 0 chr18 7932428 7935920 -78741628 - L1PA8 LINE L1 0 6172 2778 26134 40 41 2 chr18 7935920 7939142 -78738406 + L1P LINE L1 2 3347 -2799 10008 36 0 4 chr18 7939135 7940343 -78737205 - L1PA8 LINE L1 -3351 2795 1593 * 10044 140 10 28 chr18 7940399 7942428 -78735120 - L1PA11 LINE L1 -3 6171 4177 1917 110 0 4 chr18 7942428 7942683 -78734865 - AluSx SINE Alu -30 282 29 10044 140 10 28 chr18 7942683 7943105 -78734443 - L1PA11 LINE L1 -1997 4177 3749 252 196 59 0 chr18 7943130 7943181 -78734367 + MER116 DNA Mariner 5 58 -22 275 301 0 0 chr18 7943310 7943383 -78734165 + L2 LINE L2 3184 3256 -57 393 309 103 0 chr18 7943541 7943677 -78733871 + MER117 DNA MER1_type 1 150 -47 2071 101 56 0 chr18 7943939 7944225 -78733323 + AluSx SINE Alu 1 302 -10 2305 110 0 3 chr18 7944445 7944754 -78732794 + AluSg SINE Alu 1 308 -2 219 264 0 30 chr18 7945717 7945796 -78731752 + GA-rich Low_complexity Low_complexity 4 125 0 765 172 9 0 chr18 7946912 7947028 -78730520 - FLAM_C SINE Alu -16 117 1 241 259 0 35 chr18 7947028 7947103 -78730445 - L1ME4a LINE L1 -81 6109 6036 465 213 17 0 chr18 7947158 7947332 -78730216 + (TA)n Simple_repeat Simple_repeat 2 178 0 279 0 0 0 chr18 7947332 7947363 -78730185 + (GA)n Simple_repeat Simple_repeat 2 32 0 805 322 51 29 chr18 7947558 7947746 -78729802 - L1M4 LINE L1 -1050 5096 4914 3897 133 4 8 chr18 7947746 7948274 -78729274 + MER1A DNA MER1_type 2 527 0 805 322 51 29 chr18 7948274 7948669 -78728879 - L1M4 LINE L1 -1232 4914 4500 22 0 0 0 chr18 7948731 7948753 -78728795 + AT_rich Low_complexity Low_complexity 1 22 0 206 219 0 0 chr18 7948858 7948899 -78728649 + (TCTA)n Simple_repeat Simple_repeat 2 42 0 225 250 13 26 chr18 7948989 7949065 -78728483 + L1ME2 LINE L1 5904 5978 -186 * 2205 222 36 28 chr18 7949054 7949661 -78727887 - L1ME4a LINE L1 -236 5997 5386 354 276 140 23 chr18 7949678 7949986 -78727562 - L1ME4a LINE L1 -4772 1624 1281 239 253 152 42 chr18 7949996 7950352 -78727196 - L1M4 LINE L1 -3608 2538 2144 2843 68 6 11 chr18 7950359 7950724 -78726824 - L1PA8 LINE L1 -6 6166 5804 308 279 115 10 chr18 7951884 7951988 -78725560 + L2 LINE L2 3190 3304 -9 357 343 23 17 chr18 7952019 7952194 -78725354 - L1MC/D LINE L1 -2256 5552 5377 23 54 0 0 chr18 7952242 7952279 -78725269 + AT_rich Low_complexity Low_complexity 1 37 0 613 135 0 0 chr18 7952279 7952383 -78725165 - L1MA7 LINE L1 -2 6289 6186 302 214 83 0 chr18 7952387 7952471 -78725077 - L1MC/D LINE L1 -1002 5357 5267 278 283 202 0 chr18 7952802 7952901 -78724647 - MIR SINE MIR -122 140 22 2090 100 18 0 chr18 7953143 7953495 -78724053 + AluSq SINE Alu 1 357 0 251 274 65 0 chr18 7954506 7954568 -78722980 - MIR SINE MIR -84 124 59 2435 76 0 0 chr18 7955460 7955763 -78721785 - AluY SINE Alu -8 303 1 664 191 132 0 chr18 7955823 7955975 -78721573 - MER5A DNA MER1_type -11 178 7 646 285 153 6 chr18 7956021 7956361 -78721187 - LTR16C LTR ERVL 0 491 102 314 239 11 0 chr18 7956796 7956888 -78720660 + (CA)n Simple_repeat Simple_repeat 2 94 0 455 309 23 23 chr18 7957102 7957277 -78720271 + MIR SINE MIR 16 190 -72 212 367 0 0 chr18 7957334 7957413 -78720135 + MIR SINE MIR 165 243 -19 2185 236 68 21 chr18 7958323 7958945 -78718603 - L1ME3 LINE L1 -8 6154 5504 195 263 53 0 chr18 7959081 7959138 -78718410 - MIR SINE MIR -87 175 116 504 335 60 9 chr18 7959866 7960081 -78717467 - MIR SINE MIR -34 228 3 697 283 117 49 chr18 7962629 7962936 -78714612 - MLT1I LTR MaLR -9 400 73 518 323 36 5 chr18 7963015 7963207 -78714341 + MIR SINE MIR 59 256 -6 388 305 249 24 chr18 7963594 7964007 -78713541 - L2 LINE L2 -4 3309 2804 22 0 0 0 chr18 7964899 7964921 -78712627 + AT_rich Low_complexity Low_complexity 1 22 0 2193 232 102 61 chr18 7965522 7966364 -78711184 - L1ME2 LINE L1 -9 6155 5253 2771 129 24 2 chr18 7966364 7966421 -78711127 + L1PB3 LINE L1 5726 5780 -374 438 20 0 0 chr18 7966421 7966472 -78711076 + (CA)n Simple_repeat Simple_repeat 2 52 0 2771 129 24 2 chr18 7966472 7966831 -78710717 + L1PB3 LINE L1 5780 6151 -3 2193 232 102 61 chr18 7966831 7967236 -78710312 - L1ME2 LINE L1 -911 5253 4866 297 222 0 123 chr18 7968176 7968257 -78709291 + MER91B DNA MER1_type 1 71 -119 327 341 168 0 chr18 7968283 7968450 -78709098 - MIR SINE MIR -33 229 35 341 244 238 0 chr18 7968933 7969093 -78708455 + MIR SINE MIR 50 247 -15 209 195 0 0 chr18 7970788 7970829 -78706719 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 187 222 44 0 chr18 7971759 7971804 -78705744 + L2 LINE L2 3222 3268 -4 * 237 276 102 47 chr18 7971803 7971930 -78705618 - L2 LINE L2 -36 3236 3103 1728 169 10 13 chr18 7972086 7972393 -78705155 - AluJo SINE Alu -6 306 1 252 241 0 0 chr18 7974486 7974540 -78703008 + L1MC4 LINE L1 6649 6702 -1340 * 270 242 32 21 chr18 7974516 7974611 -78702937 - L1MC4 LINE L1 -1340 6702 6607 323 305 47 23 chr18 7976021 7976149 -78701399 - MIR3 SINE MIR -77 131 1 869 199 80 35 chr18 7976548 7976749 -78700799 - MER63A DNA MER1_type 0 210 1 201 147 0 0 chr18 7976856 7976890 -78700658 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 1252 237 22 16 chr18 7977814 7978130 -78699418 + L1ME3A LINE L1 5848 6165 -5 260 343 80 42 chr18 7980075 7980475 -78697073 + L2 LINE L2 2883 3297 -16 22 0 0 0 chr18 7980716 7980738 -78696810 + AT_rich Low_complexity Low_complexity 1 22 0 1067 149 88 10 chr18 7980746 7980940 -78696608 - L1PA16 LINE L1 -1 6165 5957 819 173 0 0 chr18 7981859 7981986 -78695562 - FLAM_A SINE Alu -6 127 1 2455 69 10 0 chr18 7982733 7983036 -78694512 - AluY SINE Alu -5 306 1 21 0 0 0 chr18 7983036 7983057 -78694491 + AT_rich Low_complexity Low_complexity 1 21 0 378 326 0 17 chr18 7983534 7983715 -78693833 + (TG)n Simple_repeat Simple_repeat 2 179 0 325 248 12 0 chr18 7983730 7983891 -78693657 + (TG)n Simple_repeat Simple_repeat 2 164 0 508 296 72 9 chr18 7984256 7984479 -78693069 - MIR SINE MIR -13 249 13 3652 167 32 11 chr18 7985413 7986059 -78691489 + L1PB4 LINE L1 5494 6153 -3 1607 246 78 79 chr18 7986486 7987134 -78690414 - HAL1 LINE L1 -99 2408 1760 2844 153 7 16 chr18 7987134 7987572 -78689976 + Tigger2a DNA MER2_type 1 434 0 1607 246 78 79 chr18 7987572 7987781 -78689767 - HAL1 LINE L1 -747 1760 1552 974 276 76 80 chr18 7987769 7988505 -78689043 - HAL1 LINE L1 -1770 737 5 * 204 237 17 17 chr18 7988775 7988834 -78688714 + CT-rich Low_complexity Low_complexity 3 61 0 222 316 26 13 chr18 7988853 7988929 -78688619 - L2 LINE L2 -27 3245 3169 186 227 336 27 chr18 7989165 7989275 -78688273 - MIR SINE MIR -55 207 64 230 261 0 62 chr18 7989409 7989474 -78688074 + L2 LINE L2 3235 3295 -18 198 384 55 0 chr18 7989487 7989560 -78687988 - MIR SINE MIR -185 77 1 231 241 124 56 chr18 7990241 7990378 -78687170 + MIR SINE MIR 35 145 -63 268 259 43 9 chr18 7992412 7992528 -78685020 - L1ME4a LINE L1 -42 6079 5960 1531 203 0 26 chr18 7994763 7995073 -78682475 + AluJo SINE Alu 7 308 -4 299 277 160 16 chr18 7995089 7995277 -78682271 + L2 LINE L2 2572 2786 -528 523 268 71 117 chr18 7995385 7995894 -78681654 + L2 LINE L2 2790 3272 0 1091 246 104 9 chr18 7996021 7996338 -78681210 - MLT1I LTR MaLR 0 409 63 2151 114 3 7 chr18 7997518 7997816 -78679732 - AluSx SINE Alu -9 303 7 1007 241 42 0 chr18 7998900 7999112 -78678436 - MER58A DNA MER1_type -3 221 1 615 222 153 32 chr18 7999116 7999332 -78678216 + MIR SINE MIR 21 262 0 253 139 0 23 chr18 7999625 7999668 -78677880 + LTR23 LTR ERV1 320 361 -76 24 0 0 0 chr18 7999668 7999692 -78677856 + AT_rich Low_complexity Low_complexity 1 24 0 2052 252 104 25 chr18 7999845 8000393 -78677155 + MLT1E LTR MaLR 3 593 0 400 252 171 0 chr18 8003542 8003653 -78673895 + L2 LINE L2 3180 3309 -4 4408 260 70 65 chr18 8004209 8004894 -78672654 - HAL1 LINE L1 -258 2249 1569 1720 148 7 28 chr18 8004894 8005178 -78672370 - AluJb SINE Alu -32 280 3 4408 260 70 65 chr18 8005178 8005857 -78671691 - HAL1 LINE L1 -938 1569 895 2108 177 112 26 chr18 8005857 8006101 -78671447 - MLT1C LTR MaLR 0 467 245 1851 135 14 17 chr18 8006101 8006398 -78671150 - AluSx SINE Alu -16 296 1 2108 177 112 26 chr18 8006398 8006583 -78670965 - MLT1C LTR MaLR -222 245 1 4408 260 70 65 chr18 8006583 8007451 -78670097 - HAL1 LINE L1 -1612 895 4 410 324 149 26 chr18 8007600 8007949 -78669599 + L2 LINE L2 2870 3261 -11 298 250 16 19 chr18 8008634 8008770 -78668778 - MIR SINE MIR -8 254 81 192 297 162 0 chr18 8010233 8010307 -78667241 - MIR SINE MIR -66 142 57 358 267 87 47 chr18 8010705 8010855 -78666693 - MIR SINE MIR -77 185 30 184 219 0 24 chr18 8011016 8011057 -78666491 + L2 LINE L2 3213 3252 -20 192 318 63 0 chr18 8011103 8011166 -78666382 - L2 LINE L2 -74 3198 3132 423 195 30 150 chr18 8011193 8011393 -78666155 + MER5B DNA MER1_type 1 176 -2 263 257 36 71 chr18 8011921 8012061 -78665487 - MER5A DNA MER1_type 0 189 55 270 278 96 35 chr18 8013040 8013155 -78664393 + L2 LINE L2 3182 3303 -10 530 275 97 76 chr18 8013976 8014409 -78663139 - LTR67 LTR ERVL -1 556 115 303 347 53 22 chr18 8014495 8014815 -78662733 + L2 LINE L2 552 881 -2433 239 318 19 9 chr18 8015165 8015272 -78662276 + L2 LINE L2 1313 1420 -1894 1833 166 7 0 chr18 8016152 8016430 -78661118 + AluJo SINE Alu 1 280 -32 32 0 0 0 chr18 8016442 8016474 -78661074 + AT_rich Low_complexity Low_complexity 1 32 0 626 203 24 0 chr18 8017641 8017764 -78659784 + FLAM_C SINE Alu 2 127 -6 415 343 36 7 chr18 8018225 8018502 -78659046 + L2 LINE L2 2483 2767 -547 421 222 182 0 chr18 8018886 8019038 -78658510 + MER5A DNA MER1_type 4 187 -2 246 269 77 0 chr18 8019047 8019125 -78658423 + L2 LINE L2 3197 3280 -33 1585 120 94 11 chr18 8019152 8019418 -78658130 + MER72 LTR ERV1 435 722 0 269 284 13 54 chr18 8019574 8019745 -78657803 + MIR SINE MIR 49 212 -50 199 291 90 30 chr18 8020286 8020420 -78657128 - L3b LINE CR1 -149 1434 1293 400 275 43 29 chr18 8020818 8020956 -78656592 + MIR SINE MIR 123 262 0 207 244 49 71 chr18 8021342 8021431 -78656117 - MIR SINE MIR -66 142 81 180 0 0 0 chr18 8021885 8021905 -78655643 + (TTCCC)n Simple_repeat Simple_repeat 5 24 0 2939 150 96 14 chr18 8021955 8022468 -78655080 - MER21A LTR ERV1 -1 930 376 1444 125 73 8 chr18 8022473 8022721 -78654827 - MER21A LTR ERV1 -667 264 1 2219 121 10 0 chr18 8024891 8025198 -78652350 - AluSx SINE Alu -2 310 1 390 287 56 0 chr18 8025198 8025341 -78652207 + L1MC5 LINE L1 7292 7442 -519 29 47 0 0 chr18 8025663 8025706 -78651842 + AT_rich Low_complexity Low_complexity 1 43 0 374 194 0 0 chr18 8025921 8025993 -78651555 - L1MB7 LINE L1 -1 6183 6112 1494 71 81 0 chr18 8025993 8026201 -78651347 + L1PA11 LINE L1 5948 6174 0 8452 211 52 17 chr18 8026201 8029219 -78648329 - L1MB7 LINE L1 -57 6127 3002 344 204 51 31 chr18 8029349 8029447 -78648101 - MIR3 SINE MIR -26 182 83 4036 133 7 2 chr18 8029884 8030503 -78647045 + L1MA2 LINE L1 5485 6106 -198 301 210 8 8 chr18 8030503 8030627 -78646921 + (TA)n Simple_repeat Simple_repeat 1 124 0 1239 84 30 45 chr18 8030634 8030836 -78646712 + L1MA2 LINE L1 6106 6304 0 935 174 11 6 chr18 8082515 8082693 -78594855 + L1PB4 LINE L1 5978 6156 0 2201 108 0 0 chr18 8082832 8083119 -78594429 + AluSx SINE Alu 1 287 -25 186 133 0 0 chr18 8085464 8085494 -78592054 + (TTA)n Simple_repeat Simple_repeat 3 32 0 25 75 0 0 chr18 8086039 8086092 -78591456 + AT_rich Low_complexity Low_complexity 1 53 0 196 367 0 11 chr18 8087061 8087151 -78590397 + L2 LINE L2 2932 3020 -252 25 31 0 0 chr18 8087668 8087700 -78589848 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr18 8087763 8087791 -78589757 + AT_rich Low_complexity Low_complexity 1 28 0 467 286 33 44 chr18 8089389 8089571 -78587977 - MIR SINE MIR 0 262 83 773 267 11 11 chr18 8089693 8089884 -78587664 - MIR SINE MIR -6 256 66 289 365 43 9 chr18 8089938 8090053 -78587495 + MIR3 SINE MIR 60 178 -30 705 299 37 5 chr18 8090300 8090517 -78587031 + MIR SINE MIR 39 262 0 336 256 25 91 chr18 8091307 8091428 -78586120 - MIR SINE MIR -141 121 9 372 278 42 112 chr18 8091461 8091720 -78585828 - MIR SINE MIR -1 261 21 22 35 0 0 chr18 8092201 8092230 -78585318 + AT_rich Low_complexity Low_complexity 1 29 0 189 278 28 42 chr18 8094082 8094154 -78583394 + L3 LINE CR1 404 474 -1103 189 0 0 0 chr18 8094430 8094451 -78583097 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 555 213 84 26 chr18 8097413 8097568 -78579980 + MIR SINE MIR 97 260 -2 467 181 11 0 chr18 8098149 8098243 -78579305 + MER53 DNA DNA 95 189 0 665 300 69 36 chr18 8099476 8099809 -78577739 - L2 LINE L2 -2 3311 2968 501 298 146 0 chr18 8100131 8100289 -78577259 + MER5A DNA MER1_type 9 189 0 297 356 87 0 chr18 8100629 8100778 -78576770 + MIR SINE MIR 31 192 -70 209 345 0 0 chr18 8101038 8101096 -78576452 - L2 LINE L2 -16 3256 3199 222 37 0 0 chr18 8101747 8101774 -78575774 + (CA)n Simple_repeat Simple_repeat 2 28 0 312 244 51 0 chr18 8105077 8105155 -78572393 + L2 LINE L2 3191 3272 -41 2078 202 16 52 chr18 8105416 8105992 -78571556 + L1MB7 LINE L1 5614 6169 -15 273 80 0 40 chr18 8106145 8106195 -78571353 + L1MC4 LINE L1 7017 7064 -978 1248 231 161 39 chr18 8106203 8106688 -78570860 + MER101B LTR ERV1 8 551 -19 1265 225 50 4 chr18 8106728 8107219 -78570329 + L1ME LINE L1 4964 5480 -743 501 283 17 8 chr18 8107219 8107339 -78570209 - MIR SINE MIR -139 123 3 241 225 47 128 chr18 8107347 8107543 -78570005 + L1ME LINE L1 5649 5821 -300 898 235 18 23 chr18 8107543 8107764 -78569784 - MER58A DNA MER1_type -4 220 1 241 225 47 128 chr18 8107764 8107825 -78569723 + L1ME LINE L1 5821 5885 -236 1790 121 180 32 chr18 8108936 8109309 -78568239 + MSTA LTR MaLR 1 428 0 4822 140 11 3 chr18 8109396 8110111 -78567437 - LTR39 LTR ERV1 0 783 63 254 276 46 11 chr18 8111263 8111350 -78566198 - MIR SINE MIR -70 192 103 812 183 14 0 chr18 8111922 8112064 -78565484 - MER5A DNA MER1_type 0 189 46 1740 176 39 17 chr18 8112067 8112426 -78565122 + MER58D DNA MER1_type 20 386 0 214 135 54 0 chr18 8112432 8112469 -78565079 - MER5A DNA MER1_type -148 41 3 435 306 63 39 chr18 8113417 8113672 -78563876 + MIR SINE MIR 2 262 0 426 286 27 0 chr18 8113755 8113867 -78563681 - L2 LINE L2 0 3272 3158 453 265 197 0 chr18 8115172 8115319 -78562229 + MER5A DNA MER1_type 14 189 0 1008 145 0 0 chr18 8115350 8115509 -78562039 - FRAM SINE Alu -24 152 1 2136 104 0 42 chr18 8115824 8116131 -78561417 + AluSq SINE Alu 1 294 -19 1136 297 100 37 chr18 8116214 8116948 -78560600 + L2 LINE L2 2272 3054 -259 237 193 88 18 chr18 8117014 8117071 -78560477 + L2 LINE L2 3206 3266 -47 629 186 119 115 chr18 8117669 8117964 -78559584 + MLT1D LTR MaLR 1 296 -209 310 93 0 0 chr18 8117980 8118028 -78559520 - AluJ/F(R)AM SINE Alu -114 197 158 576 188 42 0 chr18 8118028 8118124 -78559424 + AluJb SINE Alu 196 295 -17 647 259 51 9 chr18 8118720 8118936 -78558612 + L2 LINE L2 2549 2773 -541 1769 193 16 25 chr18 8118960 8119323 -78558225 + MLT1A1 LTR MaLR 1 360 -5 456 277 178 0 chr18 8119323 8119553 -78557995 + L2 LINE L2 2788 3066 -247 510 31 0 0 chr18 8122175 8122239 -78555309 + (TC)n Simple_repeat Simple_repeat 1 64 0 180 111 0 0 chr18 8122238 8122265 -78555283 + (CA)n Simple_repeat Simple_repeat 1 27 0 * 2444 86 0 0 chr18 8122409 8122713 -78554835 + AluY SINE Alu 1 304 -7 410 358 39 19 chr18 8123197 8123404 -78554144 - MIR SINE MIR -13 249 39 2462 124 60 2 chr18 8124029 8124424 -78553124 - MSTA LTR MaLR 0 428 2 437 304 61 43 chr18 8124549 8124779 -78552769 + MIR SINE MIR 29 262 0 769 215 0 0 chr18 8124882 8125012 -78552536 + FLAM_A SINE Alu 4 133 0 724 272 42 56 chr18 8125684 8126111 -78551437 + L1MEc LINE L1 903 1323 -4882 1363 212 78 10 chr18 8126239 8126546 -78551002 + L1ME1 LINE L1 5683 6010 -156 226 118 0 0 chr18 8126554 8126588 -78550960 + MER3 DNA MER1_type 12 45 -164 344 242 84 39 chr18 8126658 8126872 -78550676 + L1MEc LINE L1 1540 1741 -860 1223 198 45 4 chr18 8127068 8127310 -78550238 + L1MD2 LINE L1 6095 6346 -13 315 237 82 52 chr18 8127522 8127716 -78549832 + L1MEc LINE L1 2247 2446 -3769 2133 159 33 17 chr18 8128239 8128598 -78548950 + MLT1A1 LTR MaLR 1 365 0 303 93 0 0 chr18 8129077 8129120 -78548428 + (CA)n Simple_repeat Simple_repeat 1 43 0 1070 231 14 5 chr18 8129765 8129973 -78547575 - MER63A DNA MER1_type 0 210 1 207 0 0 0 chr18 8130567 8130590 -78546958 + (CA)n Simple_repeat Simple_repeat 2 24 0 302 268 36 43 chr18 8132188 8132326 -78545222 + MIR SINE MIR 69 205 -57 2087 131 0 0 chr18 8132456 8132775 -78544773 - AluSx SINE Alu 0 319 1 2225 105 0 0 chr18 8134330 8134616 -78542932 + AluSg SINE Alu 1 286 -24 272 235 47 0 chr18 8134616 8134701 -78542847 + L1MC4 LINE L1 6615 6703 -1339 431 256 12 44 chr18 8135307 8135467 -78542081 - L1ME4a LINE L1 -11 6110 5956 333 315 35 20 chr18 8135518 8135715 -78541833 - L1ME4a LINE L1 -284 5837 5638 2316 132 9 18 chr18 8136238 8136578 -78540970 + MER1B DNA MER1_type 1 337 0 243 349 63 50 chr18 8136607 8137132 -78540416 - L2 LINE L2 -556 2758 2227 851 83 0 0 chr18 8137962 8138071 -78539477 + AluSq/x SINE Alu 1 109 -203 1950 241 55 33 chr18 8138175 8138372 -78539176 - L1MEc LINE L1 -1968 4247 4056 633 156 25 0 chr18 8138372 8138494 -78539054 - L1MB7 LINE L1 0 6184 6060 1950 241 55 33 chr18 8138494 8138514 -78539034 - L1MEc LINE L1 -2159 4056 4038 1164 155 0 15 chr18 8138514 8138714 -78538834 - L1PB1 LINE L1 -1 6150 5954 1950 241 55 33 chr18 8138714 8139134 -78538414 - L1MEc LINE L1 -2177 4038 3595 650 268 163 68 chr18 8140343 8141403 -78536145 + HAL1 LINE L1 733 1893 -614 225 108 0 0 chr18 8141888 8141925 -78535623 + (TG)n Simple_repeat Simple_repeat 2 38 0 361 152 68 47 chr18 8142984 8143222 -78534326 + (CTATA)n Simple_repeat Simple_repeat 1 242 0 205 189 0 0 chr18 8143222 8143259 -78534289 + (TACTG)n Simple_repeat Simple_repeat 4 40 0 348 148 0 0 chr18 8143371 8143432 -78534116 + (CA)n Simple_repeat Simple_repeat 2 62 0 653 333 144 26 chr18 8145337 8146247 -78531301 + L2 LINE L2 2246 3272 0 1046 203 24 24 chr18 8146602 8146814 -78530734 + AluJo SINE Alu 6 217 -95 262 214 157 14 chr18 8147721 8147791 -78529757 + L2 LINE L2 3138 3217 -55 2404 74 3 0 chr18 8147876 8148172 -78529376 + AluY SINE Alu 1 297 -14 312 91 0 0 chr18 8148280 8148324 -78529224 + (TA)n Simple_repeat Simple_repeat 2 45 0 2049 86 0 80 chr18 8148324 8148661 -78528887 - AluY SINE Alu -1 310 1 821 229 40 8 chr18 8148667 8148916 -78528632 - L1MEc LINE L1 -3111 3104 2848 276 301 117 20 chr18 8148943 8149335 -78528213 - L1MEc LINE L1 -3540 2675 2246 261 180 0 0 chr18 8149335 8149385 -78528163 + CT-rich Low_complexity Low_complexity 4 53 0 888 238 18 6 chr18 8149391 8149740 -78527808 - AluJb SINE Alu 0 484 134 908 281 64 96 chr18 8149745 8149818 -78527730 - L1MEc LINE L1 -4105 2291 2217 2004 143 10 7 chr18 8149818 8150118 -78527430 - AluSx SINE Alu -11 301 1 908 281 64 96 chr18 8150118 8151186 -78526362 - L1MEc LINE L1 -4179 2217 1211 1838 161 14 0 chr18 8151186 8151477 -78526071 - AluSx SINE Alu -12 300 6 908 281 64 96 chr18 8151477 8151890 -78525658 - L1MEc LINE L1 -5185 1211 786 1922 146 3 3 chr18 8152285 8152573 -78524975 - AluJb SINE Alu -24 288 1 313 276 106 29 chr18 8152682 8152852 -78524696 - L1MEc LINE L1 -6121 275 93 963 228 28 0 chr18 8152931 8153111 -78524437 - MER5A DNA MER1_type -3 186 2 22 35 0 0 chr18 8153327 8153356 -78524192 + AT_rich Low_complexity Low_complexity 1 29 0 1210 166 62 24 chr18 8154047 8154336 -78523212 - L1 LINE L1 -2368 3778 3479 23 33 0 0 chr18 8154354 8154384 -78523164 + AT_rich Low_complexity Low_complexity 1 30 0 3234 46 0 0 chr18 8154704 8155099 -78522449 + L1P LINE L1 3736 4130 -2016 634 291 44 5 chr18 8155200 8155406 -78522142 - L1ME3A LINE L1 -331 5839 5626 423 56 0 0 chr18 8156098 8156152 -78521396 + (TG)n Simple_repeat Simple_repeat 2 55 0 7894 112 16 2 chr18 8157913 8159013 -78518535 + THE1-int LTR MaLR 7 1121 -459 496 279 6 17 chr18 8159574 8159746 -78517802 + L1ME3A LINE L1 5782 5951 -219 327 305 73 20 chr18 8159833 8159984 -78517564 + L1ME3A LINE L1 6009 6167 -3 1645 191 0 13 chr18 8160044 8160347 -78517201 + AluSx SINE Alu 3 301 -11 1994 140 18 20 chr18 8162228 8162571 -78514977 - MER1A DNA MER1_type -185 344 3 276 217 17 17 chr18 8163938 8163998 -78513550 - MER5B DNA MER1_type -6 172 113 184 336 75 8 chr18 8164035 8164169 -78513379 - L2 LINE L2 -1145 2169 2027 356 252 209 0 chr18 8164658 8164773 -78512775 - MER5A DNA MER1_type -10 179 41 1701 242 115 11 chr18 8165192 8166022 -78511526 + L1ME3A LINE L1 5170 6079 -91 800 229 17 17 chr18 8166282 8166517 -78511031 - AluJb SINE Alu 0 368 134 531 266 64 97 chr18 8166522 8166595 -78510953 - L1MEc LINE L1 -4105 2616 2542 1995 157 3 7 chr18 8166595 8166895 -78510653 - AluSx SINE Alu -13 299 1 531 266 64 97 chr18 8166895 8167088 -78510460 - L1MEc LINE L1 -4179 2542 2359 1601 162 6 67 chr18 8167154 8167468 -78510080 - AluJo SINE Alu -15 297 3 726 276 98 52 chr18 8167498 8168226 -78509322 - L1MEc LINE L1 -4586 1995 1194 1600 263 26 41 chr18 8168231 8168812 -78508736 + L1PBa LINE L1 719 1290 -5573 589 202 8 8 chr18 8170446 8170570 -78506978 + MER3 DNA MER1_type 2 125 -84 225 0 0 0 chr18 8170620 8170645 -78506903 + (CA)n Simple_repeat Simple_repeat 1 25 0 183 80 0 0 chr18 8170781 8170806 -78506742 + (TCCCC)n Simple_repeat Simple_repeat 2 26 0 2606 119 18 39 chr18 8170897 8171260 -78506288 + MER50 LTR ERV1 8 377 -357 2656 93 3 3 chr18 8171260 8171615 -78505933 - THE1A LTR MaLR 0 355 1 12112 87 12 0 chr18 8171615 8173173 -78504375 - THE1A-int LTR MaLR 0 1580 4 2826 67 3 6 chr18 8173177 8173533 -78504015 - THE1A LTR MaLR 0 355 1 2606 119 18 39 chr18 8173533 8173599 -78503949 + MER50 LTR ERV1 379 434 -300 2288 100 24 28 chr18 8173604 8174163 -78503385 + MER51A LTR ERV1 6 633 -1 1389 189 10 20 chr18 8174169 8174466 -78503082 + MER50 LTR ERV1 436 729 -5 23 0 0 0 chr18 8175725 8175748 -78501800 + AT_rich Low_complexity Low_complexity 1 23 0 2292 92 3 0 chr18 8175840 8176123 -78501425 - AluSx SINE Alu -13 299 16 2149 103 45 0 chr18 8178435 8178726 -78498822 - AluSc SINE Alu -5 304 1 578 192 56 16 chr18 8178803 8178928 -78498620 + Charlie1 DNA MER1_type 1 130 -2631 1953 139 19 19 chr18 8179045 8179354 -78498194 - AluSx SINE Alu -3 309 1 317 316 81 21 chr18 8179355 8179589 -78497959 + L2 LINE L2 2594 2841 -473 2263 117 0 0 chr18 8179631 8179931 -78497617 - AluSx SINE Alu -8 304 5 2111 111 3 14 chr18 8179943 8180253 -78497295 - AluSp SINE Alu 0 307 1 2217 79 14 3 chr18 8180271 8180561 -78496987 - AluSx SINE Alu -19 293 1 1603 120 17 0 chr18 8181274 8181507 -78496041 + AluSx SINE Alu 63 299 -13 378 299 14 7 chr18 8181531 8181693 -78495855 - L1MDa LINE L1 -4916 1299 1155 724 264 0 21 chr18 8181700 8181893 -78495655 - AluJo SINE Alu -2 310 122 595 209 12 18 chr18 8181894 8182057 -78495491 - L1MDa LINE L1 -5241 1155 994 1248 245 76 30 chr18 8182070 8182234 -78495314 - L1MDa LINE L1 -5495 901 746 2376 84 10 3 chr18 8182234 8182542 -78495006 - AluY SINE Alu -1 310 1 1248 245 76 30 chr18 8182542 8182813 -78494735 - L1MDa LINE L1 -5650 746 446 396 196 265 0 chr18 8182879 8182981 -78494567 + MER3 DNA MER1_type 81 209 0 280 184 0 0 chr18 8182938 8182987 -78494561 - MER3 DNA MER1_type -119 90 42 * 794 262 65 38 chr18 8182987 8183327 -78494221 - L1MDa LINE L1 -5987 409 61 2234 114 0 0 chr18 8183545 8183852 -78493696 + AluSx SINE Alu 1 307 -5 180 111 0 0 chr18 8184944 8184971 -78492577 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 475 195 0 0 chr18 8187401 8187478 -78490070 + MER91B DNA MER1_type 1 77 -113 1983 170 0 0 chr18 8188321 8188615 -78488933 - AluJo SINE Alu -13 299 6 2198 102 0 3 chr18 8188739 8189050 -78488498 - AluSg SINE Alu 0 310 1 1754 184 0 20 chr18 8189107 8189278 -78488270 - AluJo SINE Alu -10 302 138 2021 144 0 7 chr18 8189278 8189576 -78487972 - AluSx SINE Alu -16 296 1 1754 184 0 20 chr18 8189576 8189709 -78487839 - AluJo SINE Alu -174 138 4 295 169 56 0 chr18 8189713 8189784 -78487764 + L1MC5 LINE L1 7703 7777 -184 216 286 43 43 chr18 8190280 8190350 -78487198 - L2 LINE L2 0 3272 3203 680 246 20 101 chr18 8191195 8191492 -78486056 + L1MEc LINE L1 39 311 -6085 483 141 0 0 chr18 8191492 8191556 -78485992 + AluS SINE Alu 2 65 -248 2093 99 14 10 chr18 8191556 8191849 -78485699 - AluSp SINE Alu -19 294 1 2134 96 27 10 chr18 8191853 8192146 -78485402 - AluSg SINE Alu -12 298 1 1723 190 3 3 chr18 8192577 8192877 -78484671 - AluJo SINE Alu -12 300 1 1471 213 64 4 chr18 8192906 8193361 -78484187 - L1MDa LINE L1 -4245 2295 1814 2424 92 0 3 chr18 8193361 8193665 -78483883 - AluSq SINE Alu -10 303 1 2470 80 3 0 chr18 8193665 8193964 -78483584 - AluSq SINE Alu -13 300 1 504 268 24 16 chr18 8194016 8194143 -78483405 + L2 LINE L2 3138 3265 -7 2213 110 0 0 chr18 8195039 8195320 -78482228 + AluSx SINE Alu 24 304 -8 269 296 217 9 chr18 8195968 8196083 -78481465 + L2 LINE L2 3134 3272 0 2322 102 0 0 chr18 8196085 8196380 -78481168 + AluSq SINE Alu 1 295 -18 521 91 57 0 chr18 8197065 8197153 -78480395 + AluSp/q SINE Alu 211 303 -10 1729 140 19 0 chr18 8197225 8197490 -78480058 + MER1B DNA MER1_type 70 339 0 441 148 0 49 chr18 8197532 8197613 -78479935 + FRAM/FAM SINE Alu 1 74 -102 1621 118 5 5 chr18 8197613 8197834 -78479714 - AluSq SINE Alu -68 245 25 2194 100 7 32 chr18 8197840 8198150 -78479398 - AluSg SINE Alu -8 302 1 2255 96 0 7 chr18 8198174 8198456 -78479092 - AluSx SINE Alu -32 280 1 1977 164 41 19 chr18 8198555 8198921 -78478627 - THE1C LTR MaLR 0 375 2 549 305 96 61 chr18 8199741 8199816 -78477732 + L2 LINE L2 1902 1973 -1341 1851 179 98 22 chr18 8199816 8200184 -78477364 + MSTD LTR MaLR 1 396 0 549 305 96 61 chr18 8200184 8200398 -78477150 + L2 LINE L2 1973 2207 -1107 2372 104 0 0 chr18 8200398 8200697 -78476851 - AluSg SINE Alu -11 299 1 549 305 96 61 chr18 8200697 8200750 -78476798 + L2 LINE L2 2207 2257 -1057 182 242 0 0 chr18 8200762 8200795 -78476753 - L2 LINE L2 -1057 2257 2225 302 151 19 0 chr18 8200874 8200927 -78476621 + AluSp SINE Alu 136 189 -114 2235 85 170 3 chr18 8201047 8201411 -78476137 + pTR5 LTR ERV1 1604 2028 -410 325 234 11 0 chr18 8201412 8201506 -78476042 + LTR30 LTR ERV1 548 642 -80 1542 97 0 9 chr18 8201509 8201736 -78475812 + pTR5 LTR ERV1 172 396 -2042 665 176 57 0 chr18 8201755 8201914 -78475634 + Charlie1 DNA MER1_type 2594 2761 0 194 367 86 0 chr18 8201917 8202045 -78475503 - L2 LINE L2 -887 2427 2289 2141 113 0 13 chr18 8202204 8202504 -78475044 - AluSg SINE Alu -14 296 1 1935 106 26 44 chr18 8202604 8202687 -78474861 + LTR56 LTR ERV1 1 84 -361 1482 180 0 75 chr18 8202687 8203022 -78474526 + AluJo SINE Alu 1 312 0 1935 106 26 44 chr18 8203022 8203278 -78474270 + LTR56 LTR ERV1 84 335 -110 596 139 20 10 chr18 8203279 8203380 -78474168 + AluSg1 SINE Alu 2 103 -206 23 0 0 0 chr18 8204036 8204059 -78473489 + GC_rich Low_complexity Low_complexity 1 23 0 192 77 0 0 chr18 8204072 8204098 -78473450 + (CACCC)n Simple_repeat Simple_repeat 5 30 0 1267 153 55 67 chr18 8204735 8204989 -78472559 - AluJo SINE Alu -61 251 1 566 295 212 25 chr18 8204998 8205599 -78471949 - L2 LINE L2 -245 3068 2355 760 173 0 0 chr18 8205615 8205725 -78471823 + FLAM_C SINE Alu 2 111 -32 1282 104 6 28 chr18 8205745 8205927 -78471621 - AluSg/x SINE Alu -7 305 128 2517 87 0 0 chr18 8205932 8206243 -78471305 - AluY SINE Alu 0 311 1 266 173 67 0 chr18 8206434 8206509 -78471039 - AluJ/FRAM SINE Alu -6 296 217 225 200 0 0 chr18 8206618 8206668 -78470880 - Alu SINE Alu -83 50 1 559 157 102 30 chr18 8206668 8206834 -78470714 - ORSL DNA AcHobo -74 201 24 23 33 0 0 chr18 8207890 8207920 -78469628 + AT_rich Low_complexity Low_complexity 1 30 0 1226 106 144 56 chr18 8208163 8208447 -78469101 + THE1C LTR MaLR 1 309 -66 2223 88 27 14 chr18 8208449 8208743 -78468805 + AluSq SINE Alu 3 300 -13 198 0 0 0 chr18 8208815 8208837 -78468711 + (A)n Simple_repeat Simple_repeat 1 22 0 1998 121 14 0 chr18 8209393 8209682 -78467866 + AluSx SINE Alu 1 293 -19 2225 119 0 0 chr18 8209821 8210114 -78467434 + AluSx SINE Alu 1 293 -19 1192 175 77 122 chr18 8211918 8212044 -78465504 + MLT1A1 LTR MaLR 5 135 -230 1725 181 7 0 chr18 8212044 8212321 -78465227 + AluJo SINE Alu 1 279 -33 288 0 0 0 chr18 8212321 8212353 -78465195 + (CA)n Simple_repeat Simple_repeat 1 32 0 1192 175 77 122 chr18 8212353 8212603 -78464945 + MLT1A1 LTR MaLR 133 365 0 592 260 81 0 chr18 8212799 8212972 -78464576 + MIR SINE MIR 8 194 -68 910 185 63 5 chr18 8213925 8214114 -78463434 + MER3 DNA MER1_type 1 200 -9 849 156 0 22 chr18 8214341 8214476 -78463072 - FLAM_C SINE Alu 0 133 2 528 143 156 71 chr18 8215822 8215976 -78461572 - MER53 DNA DNA 0 189 23 398 288 39 78 chr18 8216463 8216786 -78460762 + L1 LINE L1 4116 4413 -1733 1363 184 98 0 chr18 8216786 8217052 -78460496 + AluJo SINE Alu 1 292 -20 398 288 39 78 chr18 8217052 8217242 -78460306 + L1 LINE L1 4413 4609 -1537 386 243 75 75 chr18 8217541 8217714 -78459834 + MER5B DNA MER1_type 4 176 -2 260 301 8 38 chr18 8219314 8219447 -78458101 + L3b LINE CR1 1205 1333 -250 197 250 0 0 chr18 8219475 8219523 -78458025 - L2 LINE L2 -1 3312 3265 2702 39 0 0 chr18 8220811 8221121 -78456427 + AluY SINE Alu 1 310 -1 530 210 24 8 chr18 8221481 8221605 -78455943 + L2 LINE L2 3188 3313 0 304 306 163 20 chr18 8224855 8225198 -78452350 - L2 LINE L2 -1 3271 2880 26 30 0 0 chr18 8225971 8226004 -78451544 + AT_rich Low_complexity Low_complexity 1 33 0 435 273 143 35 chr18 8227967 8228400 -78449148 + L1ME4a LINE L1 5637 6116 -5 23 54 0 0 chr18 8228405 8228442 -78449106 + AT_rich Low_complexity Low_complexity 1 37 0 432 211 35 9 chr18 8228510 8228624 -78448924 + L1MA9 LINE L1 6174 6290 -22 1936 123 30 43 chr18 8228914 8229216 -78448332 + AluSx SINE Alu 1 298 -14 194 103 0 51 chr18 8229218 8229257 -78448291 + (GGAGAA)n Simple_repeat Simple_repeat 4 40 0 1248 89 0 0 chr18 8229259 8229439 -78448109 + (GAA)n Simple_repeat Simple_repeat 1 180 0 283 309 18 0 chr18 8229778 8229888 -78447660 - MIR SINE MIR -94 168 57 323 267 175 8 chr18 8230532 8230652 -78446896 + MIR SINE MIR 107 246 -16 489 110 0 0 chr18 8231244 8231317 -78446231 + (TA)n Simple_repeat Simple_repeat 2 74 0 314 219 42 73 chr18 8231895 8231991 -78445557 - MIR SINE MIR -115 147 55 324 333 11 34 chr18 8233767 8233944 -78443604 - MER5B DNA MER1_type -3 175 3 1014 195 26 5 chr18 8234060 8234255 -78443293 - MER20 DNA MER1_type -4 215 17 251 240 32 25 chr18 8238516 8238596 -78438952 + MIR SINE MIR 84 150 -58 212 200 0 0 chr18 8238806 8238846 -78438702 - L2 LINE L2 -3 3269 3230 1799 171 4 0 chr18 8239656 8239996 -78437552 + AluJo SINE Alu 1 341 0 239 270 72 36 chr18 8243969 8244080 -78433468 + MIR SINE MIR 40 154 -54 1056 24 0 0 chr18 8244091 8244218 -78433330 + (AATAG)n Simple_repeat Simple_repeat 4 130 0 181 264 38 0 chr18 8244252 8244305 -78433243 + MIR SINE MIR 207 261 -1 1840 165 11 0 chr18 8245924 8246203 -78431345 + AluJo SINE Alu 1 282 -30 1219 211 55 25 chr18 8247325 8247642 -78429906 + MER33 DNA MER1_type 1 315 -9 222 265 0 0 chr18 8247930 8247979 -78429569 + L2 LINE L2 3265 3313 0 295 247 62 21 chr18 8250204 8250301 -78427247 + L2 LINE L2 3162 3262 -10 2217 126 0 0 chr18 8251672 8251973 -78425575 - AluSq SINE Alu -12 301 1 1384 210 62 4 chr18 8252775 8253051 -78424497 + AluJo SINE Alu 1 292 -20 315 0 0 0 chr18 8253216 8253251 -78424297 + (TG)n Simple_repeat Simple_repeat 2 36 0 1999 156 0 0 chr18 8255158 8255453 -78422095 - AluSx SINE Alu -17 295 1 325 268 34 9 chr18 8256673 8256853 -78420695 - MIR SINE MIR -8 254 3 290 288 137 26 chr18 8257485 8257638 -78419910 - MIR SINE MIR -73 189 20 192 194 208 28 chr18 8259985 8260057 -78417491 + MER5B DNA MER1_type 23 107 -71 819 250 90 8 chr18 8260305 8260561 -78416987 - Charlie8 DNA MER1_type -2140 277 1 192 355 0 0 chr18 8260929 8260991 -78416557 - MER5A DNA MER1_type -101 88 27 327 25 0 0 chr18 8262007 8262047 -78415501 + (TG)n Simple_repeat Simple_repeat 1 40 0 187 154 154 39 chr18 8262109 8262161 -78415387 + MIR SINE MIR 169 226 -36 431 374 131 10 chr18 8262197 8262609 -78414939 + L2 LINE L2 2811 3272 0 464 32 0 16 chr18 8263215 8263278 -78414270 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 214 393 90 22 chr18 8263279 8263546 -78414002 - L2 LINE L2 -47 3225 2941 2837 137 7 19 chr18 8263751 8264181 -78413367 + MSTB LTR MaLR 2 426 0 415 312 0 16 chr18 8265478 8265603 -78411945 + L2 LINE L2 3171 3293 -20 287 251 207 62 chr18 8265670 8265849 -78411699 - MIR SINE MIR -22 240 36 288 280 55 95 chr18 8265909 8266109 -78411439 - L3 LINE CR1 -120 1457 1266 3495 95 37 37 chr18 8267190 8267704 -78409844 + MER75 DNA T2_type 1 514 0 2287 109 20 72 chr18 8268254 8268658 -78408890 + MER4A LTR ERV1 282 664 0 657 194 32 0 chr18 8268658 8268781 -78408767 - MER2 DNA MER2_type -212 133 7 1464 208 146 16 chr18 8269097 8269612 -78407936 - MER92B LTR ERV1 -53 583 2 320 284 75 65 chr18 8271307 8271599 -78405949 + HAL1b LINE L1 53 347 -1001 3821 194 17 17 chr18 8271648 8273848 -78403700 + L1MB3 LINE L1 5 2547 -3835 241 167 30 54 chr18 8273852 8274020 -78403528 + (TA)n Simple_repeat Simple_repeat 1 164 0 4138 259 37 8 chr18 8274028 8275341 -78402207 + L1MB3 LINE L1 2519 3870 -2512 446 171 0 0 chr18 8275343 8275419 -78402129 + L1MB3 LINE L1 4401 4476 -1906 2100 176 34 65 chr18 8275419 8275835 -78401713 + L1MB3 LINE L1 5969 6371 -48 4416 126 3 26 chr18 8275835 8275883 -78401665 - L1PA15 LINE L1 0 6165 6117 2040 143 0 7 chr18 8275883 8276183 -78401365 + AluSx SINE Alu 1 298 -14 4416 126 3 26 chr18 8276183 8276792 -78400756 - L1PA15 LINE L1 -48 6117 5523 2100 176 34 65 chr18 8276792 8276840 -78400708 + L1MB3 LINE L1 6371 6419 0 416 296 66 7 chr18 8276845 8276997 -78400551 + HAL1b LINE L1 444 604 -744 520 181 29 9 chr18 8277344 8277449 -78400099 - LTR48B LTR ERV1 -70 574 468 471 287 80 80 chr18 8277519 8278097 -78399451 + L1MC4a LINE L1 4729 5306 -840 1556 250 50 80 chr18 8278103 8278790 -78398758 + L1MC4a LINE L1 5337 6002 -1806 830 201 51 44 chr18 8279327 8279552 -78397996 - MLT1A2 LTR MaLR -167 223 1 211 242 242 33 chr18 8279700 8279820 -78397728 - L3b LINE CR1 -87 1496 1352 987 209 131 18 chr18 8280330 8280612 -78396936 + MER2 DNA MER2_type 6 319 -26 29 0 0 0 chr18 8281538 8281567 -78395981 + AT_rich Low_complexity Low_complexity 1 29 0 882 146 0 15 chr18 8283367 8283504 -78394044 + FLAM_C SINE Alu 3 137 -6 699 165 0 0 chr18 8283509 8283624 -78393924 + FRAM SINE Alu 61 175 -1 235 274 230 18 chr18 8284541 8284654 -78392894 + L2 LINE L2 3136 3272 0 313 271 22 59 chr18 8284823 8284991 -78392557 + MIR SINE MIR 31 194 -68 334 292 251 45 chr18 8285403 8286187 -78391361 - L2 LINE L2 -367 2947 2002 2265 104 0 13 chr18 8286499 8286806 -78390742 + AluSc SINE Alu 1 303 -6 613 157 39 0 chr18 8287400 8287502 -78390046 - L1PB3 LINE L1 -96 6058 5953 261 296 74 89 chr18 8288315 8288518 -78389030 - L2 LINE L2 -8 3264 3065 630 174 0 17 chr18 8288544 8288659 -78388889 - U5 snRNA snRNA 0 116 4 235 336 9 27 chr18 8288796 8288906 -78388642 + MER5A DNA MER1_type 81 188 -1 323 311 102 36 chr18 8289066 8289233 -78388315 - MER5B DNA MER1_type 0 178 1 504 330 63 16 chr18 8290376 8290567 -78386981 - MIR SINE MIR -3 259 60 1027 293 142 61 chr18 8290787 8292080 -78385468 - L2 LINE L2 -2 3270 1817 301 366 89 28 chr18 8292823 8293295 -78384253 + L2 LINE L2 2232 2732 -582 383 278 56 50 chr18 8293413 8293593 -78383955 - MIR SINE MIR -29 233 53 477 295 97 18 chr18 8293708 8293925 -78383623 + MIR SINE MIR 13 246 -16 265 339 35 17 chr18 8294604 8294719 -78382829 - MIR SINE MIR -112 150 34 1224 56 0 0 chr18 8294857 8294999 -78382549 - AluSq/x SINE Alu -170 142 1 2441 126 0 15 chr18 8296426 8296768 -78380780 - MER1B DNA MER1_type 0 337 1 253 311 0 0 chr18 8297644 8297705 -78379843 - MIR SINE MIR -93 115 55 7349 70 14 3 chr18 8297842 8299630 -78377918 - L1PA8 LINE L1 0 6172 4373 293 257 101 50 chr18 8300206 8300460 -78377088 + L1M4 LINE L1 4204 4468 -1678 1203 94 18 18 chr18 8301324 8301495 -78376053 - AluSg/x SINE Alu -15 295 125 449 268 151 34 chr18 8302321 8302560 -78374988 - MLT1H LTR MaLR -64 485 219 736 208 0 13 chr18 8302642 8302791 -78374757 - L1PB4 LINE L1 0 6156 6010 2211 108 7 3 chr18 8302792 8303098 -78374450 - AluY SINE Alu -4 307 1 23 0 0 0 chr18 8303098 8303121 -78374427 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chr18 8303207 8303238 -78374310 + (CA)n Simple_repeat Simple_repeat 2 32 0 2232 145 65 0 chr18 8303360 8303747 -78373801 - L1MB3 LINE L1 0 6183 5772 9345 146 118 110 chr18 8303748 8304969 -78372579 - L1M4 LINE L1 -3399 2983 1773 8245 21 0 0 chr18 8304969 8306610 -78370938 - L1PA3 LINE L1 0 6155 4514 9345 146 118 110 chr18 8306610 8308316 -78369232 - L1M4 LINE L1 -4609 1773 17 2462 76 0 3 chr18 8309073 8309375 -78368173 - AluY SINE Alu -10 301 1 829 198 35 12 chr18 8309636 8309808 -78367740 + MLT1B LTR MaLR 1 176 -198 260 227 0 45 chr18 8309810 8309876 -78367672 + CT-rich Low_complexity Low_complexity 3 65 0 898 241 5 5 chr18 8309885 8310092 -78367456 + MLT1B LTR MaLR 184 390 0 292 258 49 55 chr18 8310849 8311012 -78366536 - L1ME4a LINE L1 -5 6116 5955 943 208 75 42 chr18 8311070 8311282 -78366266 + MER20 DNA MER1_type 1 219 0 1052 221 16 55 chr18 8312545 8312857 -78364691 - AluJb SINE Alu -2 300 1 273 146 0 0 chr18 8313179 8313227 -78364321 + (CA)n Simple_repeat Simple_repeat 2 49 0 737 305 131 41 chr18 8313286 8314047 -78363501 + L2 LINE L2 1808 2637 -677 526 308 25 120 chr18 8314251 8314618 -78362930 + L2 LINE L2 2941 3272 0 273 291 25 0 chr18 8315460 8315539 -78362009 + GA-rich Low_complexity Low_complexity 3 83 0 11460 218 36 55 chr18 8315988 8316222 -78361326 + L1PA16 LINE L1 1754 1991 -4155 2094 141 60 14 chr18 8316222 8316570 -78360978 - THE1B LTR MaLR 0 364 1 11460 218 36 55 chr18 8316570 8319351 -78358197 + L1PA16 LINE L1 1991 4824 -1322 2052 125 28 0 chr18 8319351 8319639 -78357909 + AluSx SINE Alu 1 296 -16 11460 218 36 55 chr18 8319639 8319846 -78357702 + L1PA16 LINE L1 4824 5033 -1113 785 177 14 0 chr18 8319846 8319993 -78357555 + BC200 scRNA scRNA 7 155 -45 11460 218 36 55 chr18 8319993 8320303 -78357245 + L1PA16 LINE L1 5033 5363 -783 2548 158 7 0 chr18 8320305 8320717 -78356831 + L1PA16 LINE L1 5743 6157 -9 21 0 0 0 chr18 8320970 8320991 -78356557 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 8321263 8321291 -78356257 + AT_rich Low_complexity Low_complexity 1 28 0 2299 109 0 0 chr18 8322093 8322396 -78355152 + AluSx SINE Alu 1 303 -9 1633 201 34 32 chr18 8324198 8324640 -78352908 + MER65A LTR ERV1 1 443 -2 227 303 112 35 chr18 8325133 8325284 -78352264 + MIR SINE MIR 2 167 -41 187 372 0 13 chr18 8325529 8325607 -78351941 + L2 LINE L2 3201 3277 -36 231 36 0 0 chr18 8326325 8326353 -78351195 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 275 282 54 2 chr18 8327625 8327713 -78349835 + MIR SINE MIR 62 141 -67 2147 127 6 19 chr18 8327856 8328171 -78349377 - AluSx SINE Alu -1 311 1 1276 129 50 43 chr18 8331241 8331519 -78346029 - L1MC2 LINE L1 0 6624 6345 2927 162 69 45 chr18 8331520 8332486 -78345062 - L1MC2 LINE L1 -377 6247 5267 * 4134 164 171 27 chr18 8332484 8333688 -78343860 - L1MC2 LINE L1 -4038 2388 1011 * 13599 195 25 13 chr18 8333673 8334136 -78343412 - L1PB2 LINE L1 0 6208 5752 351 0 0 0 chr18 8334136 8334175 -78343373 + (TG)n Simple_repeat Simple_repeat 2 40 0 13599 195 25 13 chr18 8334175 8340610 -78336938 - L1PB2 LINE L1 -456 5752 1 681 290 73 47 chr18 8340688 8341344 -78336204 + L1MEd LINE L1 963 1670 -4726 1746 146 3 68 chr18 8341372 8341680 -78335868 + AluJo SINE Alu 1 288 -24 396 273 57 80 chr18 8341755 8341945 -78335603 + L1MEd LINE L1 2034 2218 -4178 2026 143 10 7 chr18 8341945 8342245 -78335303 + AluSx SINE Alu 1 301 -11 396 273 57 80 chr18 8342245 8342318 -78335230 + L1MEd LINE L1 2218 2291 -4105 826 234 18 6 chr18 8342323 8342672 -78334876 + AluJb SINE Alu 134 484 0 276 185 0 0 chr18 8342673 8342727 -78334821 + GA-rich Low_complexity Low_complexity 4 57 0 241 296 111 18 chr18 8342779 8343120 -78334428 + L1MEd LINE L1 2311 2683 -3532 1405 240 87 88 chr18 8343140 8343395 -78334153 + L1MEd LINE L1 2848 3102 -3113 2091 77 0 86 chr18 8343395 8343718 -78333830 + AluY SINE Alu 1 296 -15 438 69 0 0 chr18 8343718 8343776 -78333772 + (TA)n Simple_repeat Simple_repeat 2 59 0 2091 77 0 86 chr18 8343776 8343788 -78333760 + AluY SINE Alu 296 307 -4 1405 240 87 88 chr18 8343788 8344466 -78333082 + L1MEd LINE L1 3102 3782 -2433 4670 173 59 26 chr18 8344466 8344890 -78332658 - Tigger6a DNA MER2_type -514 1083 675 227 53 0 26 chr18 8344890 8344928 -78332620 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 4670 173 59 26 chr18 8344928 8345550 -78331998 - Tigger6a DNA MER2_type -922 675 2 1405 240 87 88 chr18 8345550 8345871 -78331677 + L1MEd LINE L1 3782 4102 -2113 * 1830 252 106 19 chr18 8345852 8347368 -78330180 + L1MEd LINE L1 4526 6163 -76 23 0 0 0 chr18 8348341 8348364 -78329184 + AT_rich Low_complexity Low_complexity 1 23 0 2238 90 4 0 chr18 8348585 8348900 -78328648 + AluSg SINE Alu 1 316 0 2099 136 3 3 chr18 8348980 8349290 -78328258 + AluSx SINE Alu 1 310 -2 3762 105 11 11 chr18 8349479 8350004 -78327544 - MER1A DNA MER1_type 0 527 3 444 275 134 14 chr18 8351474 8351616 -78325932 - MIR3 SINE MIR -33 175 17 21 57 0 0 chr18 8352420 8352455 -78325093 + AT_rich Low_complexity Low_complexity 1 35 0 208 200 25 113 chr18 8352501 8352581 -78324967 - MIR SINE MIR -70 192 120 251 311 92 0 chr18 8352905 8353024 -78324524 + MIR SINE MIR 77 206 -56 24 0 0 0 chr18 8353091 8353115 -78324433 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr18 8353543 8353581 -78323967 + AT_rich Low_complexity Low_complexity 1 38 0 349 271 12 162 chr18 8353777 8353982 -78323566 - MIR SINE MIR -61 147 16 994 240 9 13 chr18 8355018 8355243 -78322305 + MER58A DNA MER1_type 1 224 0 485 251 63 21 chr18 8356028 8356219 -78321329 + L1MC4a LINE L1 5696 5894 -1914 21 0 0 0 chr18 8356230 8356251 -78321297 + AT_rich Low_complexity Low_complexity 1 21 0 1971 139 40 37 chr18 8356265 8356639 -78320909 + THE1C LTR MaLR 1 375 0 426 286 45 55 chr18 8357548 8357768 -78319780 + L2 LINE L2 3096 3313 0 269 265 29 15 chr18 8357809 8357877 -78319671 + MIR SINE MIR 24 92 -170 * 389 282 67 20 chr18 8357855 8358004 -78319544 + L2 LINE L2 3158 3313 0 273 314 95 19 chr18 8359149 8359254 -78318294 - L2 LINE L2 -4 3309 3197 353 82 0 0 chr18 8360215 8360264 -78317284 - L1PA7 LINE L1 -8 6146 6098 414 226 33 108 chr18 8360425 8360637 -78316911 + MIR SINE MIR 66 261 -1 227 79 26 0 chr18 8361391 8361429 -78316119 + (TA)n Simple_repeat Simple_repeat 2 40 0 * 279 0 0 0 chr18 8361428 8361459 -78316089 + (CA)n Simple_repeat Simple_repeat 2 32 0 1153 148 13 74 chr18 8361463 8361692 -78315856 - AluJb SINE Alu -13 299 85 21 0 0 0 chr18 8364006 8364027 -78313521 + AT_rich Low_complexity Low_complexity 1 21 0 235 279 87 76 chr18 8365938 8366110 -78311438 - MIR SINE MIR -2 260 87 2527 50 0 10 chr18 8366188 8366490 -78311058 - AluY SINE Alu -12 299 1 254 354 39 8 chr18 8366679 8366806 -78310742 + L3b LINE CR1 1316 1446 -137 281 273 0 0 chr18 8367893 8367970 -78309578 - MER116 DNA Mariner 0 80 4 242 115 19 0 chr18 8370396 8370448 -78307100 + (TA)n Simple_repeat Simple_repeat 1 53 0 189 74 0 0 chr18 8370688 8370715 -78306833 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 672 270 111 9 chr18 8370875 8371101 -78306447 + MIR SINE MIR 4 252 -10 3535 205 204 9 chr18 8371146 8372263 -78305285 - L1MDa LINE L1 -5191 1349 15 3747 137 35 5 chr18 8374915 8375580 -78301968 + L1MB1 LINE L1 5479 6163 -5 1939 93 4 0 chr18 8376024 8376271 -78301277 - AluSx SINE Alu -6 306 59 278 315 51 55 chr18 8377911 8378146 -78299402 - MIR SINE MIR -1 261 28 436 290 22 62 chr18 8378366 8378590 -78298958 - L1M4 LINE L1 -2848 3298 3084 1481 264 31 20 chr18 8379114 8379667 -78297881 - L1ME3A LINE L1 0 6170 5612 484 192 24 32 chr18 8382649 8382774 -78294774 + MER3 DNA MER1_type 2 125 -84 329 95 16 0 chr18 8382828 8382891 -78294657 + (CA)n Simple_repeat Simple_repeat 1 64 0 183 80 0 0 chr18 8383009 8383034 -78294514 + (TCCCC)n Simple_repeat Simple_repeat 2 26 0 2452 107 18 46 chr18 8383125 8383491 -78294057 + MER50 LTR ERV1 8 383 -351 2593 93 3 3 chr18 8383491 8383846 -78293702 - THE1A LTR MaLR 0 355 1 11409 89 13 8 chr18 8383846 8385414 -78292134 - THE1A-int LTR MaLR 0 1580 4 2780 67 3 6 chr18 8385418 8385774 -78291774 - THE1A LTR MaLR 0 355 1 2452 107 18 46 chr18 8385774 8385840 -78291708 + MER50 LTR ERV1 385 434 -300 2146 116 13 20 chr18 8385845 8386405 -78291143 + MER51A LTR ERV1 6 632 -2 1076 219 6 32 chr18 8386405 8386714 -78290834 + MER50 LTR ERV1 429 729 -5 23 33 0 0 chr18 8387137 8387167 -78290381 + AT_rich Low_complexity Low_complexity 1 30 0 2245 108 3 3 chr18 8387478 8387783 -78289765 + AluSq SINE Alu 4 308 -5 799 322 13 8 chr18 8387932 8388171 -78289377 - MIR SINE MIR -21 241 2 191 283 0 22 chr18 8388223 8388269 -78289279 + L2 LINE L2 3210 3254 -18 22 35 0 0 chr18 8389077 8389106 -78288442 + AT_rich Low_complexity Low_complexity 1 29 0 1077 182 10 5 chr18 8390776 8390985 -78286563 - MER2 DNA MER2_type -135 210 1 501 293 16 3 chr18 8392291 8392614 -78284934 + (TG)n Simple_repeat Simple_repeat 1 327 0 226 304 11 11 chr18 8393026 8393118 -78284430 + GA-rich Low_complexity Low_complexity 5 96 0 710 146 24 55 chr18 8393161 8393326 -78284222 + L1MB8 LINE L1 6014 6173 -5 24 32 0 0 chr18 8393347 8393378 -78284170 + AT_rich Low_complexity Low_complexity 1 31 0 186 103 0 0 chr18 8393670 8393699 -78283849 + (TA)n Simple_repeat Simple_repeat 1 29 0 1676 144 78 0 chr18 8393699 8394033 -78283515 - L1MA8 LINE L1 -36 6255 5896 222 105 0 0 chr18 8395421 8395459 -78282089 + (A)n Simple_repeat Simple_repeat 1 38 0 321 246 0 0 chr18 8395957 8396022 -78281526 - L2 LINE L2 -16 3297 3233 198 91 0 0 chr18 8396023 8396056 -78281492 + (CA)n Simple_repeat Simple_repeat 2 34 0 335 307 206 34 chr18 8397105 8397643 -78279905 - L2 LINE L2 -509 2805 2175 196 289 22 0 chr18 8397680 8397725 -78279823 - MER5A DNA MER1_type -1 188 143 251 239 94 60 chr18 8397745 8397862 -78279686 - MER5A DNA MER1_type -1 188 68 194 278 80 49 chr18 8397746 8397908 -78279640 + MER5A DNA MER1_type 17 183 -6 * 2100 133 0 10 chr18 8398317 8398619 -78278929 - AluSx SINE Alu -11 301 3 437 254 9 97 chr18 8398759 8399089 -78278459 - L1ME3A LINE L1 -88 6082 5782 320 299 93 9 chr18 8399519 8399626 -78277922 + MIR SINE MIR 34 149 -113 397 307 86 90 chr18 8400029 8400156 -78277392 + L2 LINE L2 2818 2944 -328 237 33 0 0 chr18 8400156 8400186 -78277362 + (CA)n Simple_repeat Simple_repeat 2 31 0 397 307 86 90 chr18 8400186 8400514 -78277034 + L2 LINE L2 2944 3271 -1 264 77 0 0 chr18 8400937 8400976 -78276572 + (T)n Simple_repeat Simple_repeat 1 39 0 1338 242 85 16 chr18 8402446 8402951 -78274597 - L1ME3A LINE L1 -5 6165 5626 390 74 0 0 chr18 8403642 8403696 -78273852 + (TG)n Simple_repeat Simple_repeat 2 55 0 215 333 28 37 chr18 8403709 8403817 -78273731 - L3 LINE CR1 -4 1573 1467 382 319 67 2 chr18 8403938 8404120 -78273428 + MIR SINE MIR 16 206 -56 2208 115 48 25 chr18 8404298 8404654 -78272894 + THE1B LTR MaLR 1 364 0 2670 94 3 3 chr18 8405267 8405629 -78271919 + THE1B LTR MaLR 1 362 -2 343 301 29 10 chr18 8405634 8405737 -78271811 - MIR3 SINE MIR -10 198 94 344 312 70 35 chr18 8406063 8406370 -78271178 + L1MEd LINE L1 991 1398 -1092 186 143 48 0 chr18 8406371 8406434 -78271114 + (TA)n Simple_repeat Simple_repeat 1 66 0 201 147 0 0 chr18 8407122 8407156 -78270392 + (GGAA)n Simple_repeat Simple_repeat 1 34 0 1982 160 0 3 chr18 8407379 8407686 -78269862 - AluJo SINE Alu -6 306 1 434 308 112 19 chr18 8407972 8408232 -78269316 + L1ME4a LINE L1 5831 6114 -7 1341 140 65 0 chr18 8409146 8409360 -78268188 - MER30 DNA MER1_type 0 230 3 548 270 163 54 chr18 8409791 8410838 -78266710 + HAL1 LINE L1 733 1893 -614 369 0 0 0 chr18 8411325 8411366 -78266182 + (TG)n Simple_repeat Simple_repeat 2 42 0 351 301 120 42 chr18 8411467 8411985 -78265563 - L1M4 LINE L1 -3105 3041 2484 208 327 112 9 chr18 8412073 8412180 -78265368 - MIR SINE MIR -61 147 30 348 148 0 0 chr18 8413816 8413877 -78263671 + (CA)n Simple_repeat Simple_repeat 2 62 0 184 250 155 109 chr18 8414896 8415200 -78262348 + L2 LINE L2 1477 1794 -1520 196 316 132 18 chr18 8415329 8415443 -78262105 + L2 LINE L2 3142 3268 -4 1020 333 162 13 chr18 8415506 8416618 -78260930 + L2 LINE L2 1989 3272 0 1105 197 19 24 chr18 8416973 8417186 -78260362 + AluJo SINE Alu 6 217 -95 373 215 85 100 chr18 8418090 8418220 -78259328 + L2 LINE L2 3138 3265 -7 2461 79 3 0 chr18 8418245 8418550 -78258998 + AluY SINE Alu 1 306 -5 23 54 0 0 chr18 8420039 8420076 -78257472 + AT_rich Low_complexity Low_complexity 1 37 0 515 302 107 19 chr18 8420083 8420401 -78257147 - L2 LINE L2 -2 3311 2966 570 327 167 28 chr18 8420609 8421389 -78256159 - L2 LINE L2 -1088 2226 1339 1491 177 23 36 chr18 8422755 8423060 -78254488 - AluJb SINE Alu -11 301 1 5934 32 0 0 chr18 8423377 8424028 -78253520 - L1PA4 LINE L1 0 6155 5505 180 182 0 0 chr18 8424179 8424223 -78253325 + CT-rich Low_complexity Low_complexity 1 44 0 309 51 0 0 chr18 8424753 8424792 -78252756 + (CA)n Simple_repeat Simple_repeat 2 40 0 220 378 40 20 chr18 8425531 8425679 -78251869 - MIR3 SINE MIR -48 160 10 24 32 0 0 chr18 8425703 8425734 -78251814 + AT_rich Low_complexity Low_complexity 1 31 0 2193 91 0 11 chr18 8425734 8426021 -78251527 - AluSq SINE Alu -27 286 3 6427 164 36 24 chr18 8426036 8427941 -78249607 - L1MA9 LINE L1 -20 6292 4241 2174 132 70 14 chr18 8427941 8428296 -78249252 + THE1C LTR MaLR 1 375 0 6427 164 36 24 chr18 8428296 8428473 -78249075 - L1MA9 LINE L1 -2071 4241 4068 528 248 8 0 chr18 8428451 8428580 -78248968 - L1MA9 LINE L1 -3538 2608 2479 * 280 321 80 48 chr18 8432588 8432837 -78244711 - L2 LINE L2 -201 3112 2856 2254 110 3 0 chr18 8434776 8435077 -78242471 + AluSq SINE Alu 1 302 -11 29 47 0 0 chr18 8436230 8436273 -78241275 + AT_rich Low_complexity Low_complexity 1 43 0 197 242 30 45 chr18 8436551 8436617 -78240931 + MIR3 SINE MIR 121 185 -23 256 145 13 13 chr18 8437560 8437636 -78239912 + (TG)n Simple_repeat Simple_repeat 2 77 0 44299 44 1 3 chr18 8438013 8444175 -78233373 + L1PA4 LINE L1 1 6153 -2 693 263 110 9 chr18 8444324 8444552 -78232996 - MIR SINE MIR -10 252 2 216 266 224 28 chr18 8444718 8444932 -78232616 - L2 LINE L2 -768 2546 2291 27 49 0 0 chr18 8447054 8447095 -78230453 + AT_rich Low_complexity Low_complexity 1 41 0 979 222 28 0 chr18 8447299 8447479 -78230069 + MER5A DNA MER1_type 2 186 -3 980 311 67 72 chr18 8447591 8447834 -78229714 + L1ME2 LINE L1 130 373 -6023 1922 146 3 3 chr18 8447834 8448122 -78229426 + AluJb SINE Alu 1 288 -24 980 311 67 72 chr18 8448122 8448929 -78228619 + L1ME2 LINE L1 373 1169 -5227 1794 162 17 0 chr18 8448929 8449219 -78228329 + AluSx SINE Alu 6 300 -12 980 311 67 72 chr18 8449219 8449867 -78227681 + L1ME2 LINE L1 1169 1819 -4577 * 2100 259 83 33 chr18 8449860 8451957 -78225591 + L1ME2 LINE L1 3886 6224 -9 1373 142 28 45 chr18 8454028 8454275 -78223273 - AluJo SINE Alu -69 243 1 235 294 39 29 chr18 8454306 8454408 -78223140 - MIR SINE MIR -119 143 41 254 207 69 0 chr18 8454609 8454667 -78222881 - MIR SINE MIR -108 154 93 1695 171 100 3 chr18 8455156 8455495 -78222053 + L1MB4 LINE L1 5681 6052 -128 856 147 0 22 chr18 8455518 8455654 -78221894 - L1PA15 LINE L1 -4 6161 6029 2250 112 0 13 chr18 8455654 8455967 -78221581 - AluSx SINE Alu -3 309 1 2428 95 0 0 chr18 8456329 8456634 -78220914 + AluSp SINE Alu 1 305 -8 911 119 8 0 chr18 8456641 8456767 -78220781 + AluJb SINE Alu 1 127 -185 2416 99 0 0 chr18 8456768 8457072 -78220476 + AluSx SINE Alu 1 304 -8 300 133 0 0 chr18 8457742 8457802 -78219746 + (TG)n Simple_repeat Simple_repeat 1 60 0 841 213 19 24 chr18 8459087 8459294 -78218254 + MER96B DNA MER1_type? 1 206 -211 1901 101 19 58 chr18 8461077 8461385 -78216163 + AluSx SINE Alu 11 306 -6 425 301 0 7 chr18 8461385 8461521 -78216027 + L1ME1 LINE L1 5601 5735 -431 818 191 7 7 chr18 8461521 8461662 -78215886 + FLAM_A SINE Alu 1 141 -1 321 205 118 39 chr18 8461664 8461791 -78215757 + L1ME1 LINE L1 5729 5868 -310 379 325 70 25 chr18 8461917 8462317 -78215231 - L1M4 LINE L1 -815 5331 4914 2082 135 0 3 chr18 8462445 8462741 -78214807 + AluSx SINE Alu 5 299 -13 292 216 40 0 chr18 8462792 8462866 -78214682 - L1M4 LINE L1 -1534 4612 4536 2233 94 0 3 chr18 8463263 8463549 -78213999 + AluSx SINE Alu 1 324 0 230 26 26 26 chr18 8463549 8463588 -78213960 + (TAAA)n Simple_repeat Simple_repeat 2 172 0 2449 58 10 10 chr18 8463601 8463912 -78213636 + AluY SINE Alu 1 311 0 284 227 15 0 chr18 8463921 8463987 -78213561 - L1M4 LINE L1 -1233 4913 4847 650 189 274 10 chr18 8463999 8464200 -78213348 - L1M4 LINE L1 -1374 4772 4519 581 201 75 11 chr18 8464226 8464400 -78213148 - L1M4 LINE L1 -1704 4442 4258 1468 105 5 0 chr18 8464513 8464713 -78212835 + AluSp SINE Alu 104 304 -9 1564 207 14 17 chr18 8464722 8465012 -78212536 + AluJo SINE Alu 4 292 -10 1485 115 30 4 chr18 8465014 8465249 -78212299 + Tigger2 DNA MER2_type 908 1148 -1570 1189 142 24 24 chr18 8465249 8465454 -78212094 + AluJb SINE Alu 87 291 -21 2259 123 82 107 chr18 8465456 8465942 -78211606 + Tigger2 DNA MER2_type 2244 2717 -1 354 261 50 8 chr18 8465948 8466067 -78211481 - L1MEc LINE L1 -4426 1970 1847 215 30 0 30 chr18 8466121 8466154 -78211394 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 26 0 0 0 chr18 8466398 8466424 -78211124 + AT_rich Low_complexity Low_complexity 1 26 0 297 51 0 0 chr18 8466563 8466602 -78210946 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 263 13 40 chr18 8466740 8466816 -78210732 + L2 LINE L2 2576 2649 -665 200 31 62 0 chr18 8466848 8466880 -78210668 + T-rich Low_complexity Low_complexity 2 35 0 1440 184 24 35 chr18 8466900 8467188 -78210360 - AluJb SINE Alu -27 285 1 227 287 58 35 chr18 8467193 8467280 -78210268 - L2 LINE L2 -1191 2123 2035 842 229 11 11 chr18 8467581 8467756 -78209792 + FAM SINE Alu 1 175 0 582 242 45 17 chr18 8468443 8468621 -78208927 + MER63A DNA MER1_type 1 183 -27 2314 92 0 3 chr18 8468817 8469112 -78208436 - AluSc SINE Alu -15 294 1 426 341 54 10 chr18 8469253 8469458 -78208090 + MER115 DNA AcHobo 34 247 -446 557 240 0 0 chr18 8469646 8469750 -78207798 + FRAM SINE Alu 1 100 -76 361 206 0 0 chr18 8469808 8469900 -78207648 + AluS SINE Alu 1 92 -211 35 24 0 0 chr18 8469988 8470030 -78207518 + GC_rich Low_complexity Low_complexity 1 42 0 1989 144 0 20 chr18 8470865 8471170 -78206378 - AluSq SINE Alu -14 299 1 1113 117 0 0 chr18 8471180 8471334 -78206214 - AluSg/x SINE Alu -14 295 142 474 174 0 54 chr18 8472534 8472626 -78204922 - ORSL DNA AcHobo -7 268 182 1651 156 10 23 chr18 8473456 8473757 -78203791 - AluSg SINE Alu -13 297 1 1673 166 33 13 chr18 8473759 8473916 -78203632 - AluJo SINE Alu -4 308 156 248 0 31 0 chr18 8473916 8473948 -78203600 + (CACAC)n Simple_repeat Simple_repeat 3 35 0 1673 166 33 13 chr18 8473948 8474092 -78203456 - AluJo SINE Alu -156 156 1 1280 151 28 52 chr18 8475516 8475768 -78201780 - AluJo SINE Alu -66 246 1 214 267 27 13 chr18 8475799 8475874 -78201674 - MIR SINE MIR -119 143 68 215 246 0 18 chr18 8476110 8476167 -78201381 - MIR SINE MIR -114 148 93 1416 183 158 3 chr18 8476658 8476980 -78200568 + L1MB4 LINE L1 5681 6052 -128 5613 150 14 39 chr18 8477005 8477142 -78200406 - L1PA15 LINE L1 -4 6161 6022 1991 106 0 37 chr18 8477142 8477463 -78200085 - AluSx SINE Alu -3 309 1 5613 150 14 39 chr18 8477463 8478641 -78198907 - L1PA15 LINE L1 -143 6022 4890 328 260 20 10 chr18 8479544 8479644 -78197904 + MER94 DNA DNA 19 119 -15 284 275 94 56 chr18 8480520 8480753 -78196795 + HAL1 LINE L1 2144 2385 -122 292 388 38 6 chr18 8480917 8481077 -78196471 - L2 LINE L2 -937 2377 2213 256 286 154 21 chr18 8481162 8481528 -78196020 + LTR33 LTR ERVL 31 521 0 1974 103 0 93 chr18 8481816 8482197 -78195351 - AluSq SINE Alu 0 352 1 53 57 0 0 chr18 8484129 8484217 -78193331 + AT_rich Low_complexity Low_complexity 1 88 0 1102 222 92 56 chr18 8484804 8485250 -78192298 - MLT1C LTR MaLR 0 467 6 811 274 92 43 chr18 8485257 8485976 -78191572 + L1MCc LINE L1 1212 2173 -4949 975 168 45 107 chr18 8486001 8486292 -78191256 + L1ME3 LINE L1 5879 6151 -11 4999 277 176 29 chr18 8486409 8487562 -78189986 - L2 LINE L2 0 3313 2331 1631 170 3 58 chr18 8487562 8487891 -78189657 + AluJo SINE Alu 1 311 -1 4999 277 176 29 chr18 8487891 8489617 -78187931 - L2 LINE L2 -982 2331 4 22 0 0 0 chr18 8490287 8490309 -78187239 + AT_rich Low_complexity Low_complexity 1 22 0 318 261 61 35 chr18 8490781 8490896 -78186652 + MIR SINE MIR 37 154 -108 2451 74 0 0 chr18 8492013 8492312 -78185236 - AluY SINE Alu -12 299 1 337 264 42 42 chr18 8492660 8492804 -78184744 + MLT1K LTR MaLR 443 586 -2 4298 69 4 8 chr18 8492955 8493488 -78184060 - L1PA10 LINE L1 -1 6167 5637 891 263 0 0 chr18 8495140 8495349 -78182199 - MER3 DNA MER1_type 0 209 1 535 260 18 67 chr18 8496850 8497073 -78180475 - L2 LINE L2 -1 3312 3101 532 344 106 3 chr18 8497085 8497416 -78180132 - L2 LINE L2 -1776 1538 1174 477 158 33 58 chr18 8497563 8497683 -78179865 + L1MA4A LINE L1 6181 6297 -6 240 75 151 0 chr18 8497695 8497748 -78179800 + L1MA4A LINE L1 6238 6298 -5 1042 310 57 56 chr18 8497750 8497764 -78179784 - L2 LINE L2 -462 2852 2840 2376 175 20 0 chr18 8497764 8498159 -78179389 + MER57A LTR ERV1 1 403 0 1042 310 57 56 chr18 8498159 8498825 -78178723 - L2 LINE L2 -474 2840 2171 264 217 17 17 chr18 8498837 8498897 -78178651 - MER5B DNA MER1_type -6 172 113 217 322 56 35 chr18 8498933 8499076 -78178472 - L2 LINE L2 -1150 2164 2019 407 250 194 0 chr18 8499557 8499681 -78177867 - MER5A DNA MER1_type -10 179 32 221 255 0 0 chr18 8500369 8500416 -78177132 + (CATA)n Simple_repeat Simple_repeat 2 48 0 1996 196 95 17 chr18 8500852 8501267 -78176281 + MLT1D LTR MaLR 7 463 -42 787 99 9 0 chr18 8501267 8501378 -78176170 - L1PA8 LINE L1 -1 6171 6060 1996 196 95 17 chr18 8501378 8501425 -78176123 + MLT1D LTR MaLR 463 505 0 947 218 86 12 chr18 8502841 8503137 -78174411 + MER58 DNA MER1_type 1 2406 -14 500 256 161 6 chr18 8503147 8503315 -78174233 + MIR SINE MIR 15 208 -54 1550 172 7 38 chr18 8503679 8503969 -78173579 + AluJb SINE Alu 1 281 -31 414 0 0 0 chr18 8503972 8504018 -78173530 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 204 233 0 0 chr18 8505107 8505180 -78172368 + (CTA)n Simple_repeat Simple_repeat 3 75 0 210 91 0 0 chr18 8505301 8505334 -78172214 + (A)n Simple_repeat Simple_repeat 1 33 0 3774 148 51 21 chr18 8505334 8506015 -78171533 + L1MB8 LINE L1 5476 6177 -1 726 250 43 5 chr18 8506323 8506511 -78171037 + MIR SINE MIR 46 240 -22 662 268 36 21 chr18 8506823 8507017 -78170531 - MIR SINE MIR -35 227 31 2424 91 0 0 chr18 8507507 8507805 -78169743 - AluSx SINE Alu -14 298 1 23 54 0 0 chr18 8508963 8509000 -78168548 + AT_rich Low_complexity Low_complexity 1 37 0 2354 106 3 0 chr18 8509256 8509567 -78167981 - AluSq SINE Alu -1 312 1 510 52 0 0 chr18 8510069 8510127 -78167421 + AluS SINE Alu 14 71 -242 269 315 51 55 chr18 8511770 8512005 -78165543 - MIR SINE MIR -1 261 28 427 290 22 62 chr18 8512224 8512448 -78165100 - L1M4 LINE L1 -2848 3298 3084 1732 268 29 18 chr18 8512972 8513525 -78164023 - L1ME3A LINE L1 0 6170 5612 898 231 12 0 chr18 8513967 8514136 -78163412 - FAM SINE Alu -4 171 1 376 283 151 0 chr18 8514896 8515062 -78162486 - MIR SINE MIR -38 224 34 674 198 9 0 chr18 8515775 8515891 -78161657 + FLAM_A SINE Alu 1 117 -16 23 0 0 0 chr18 8515902 8515925 -78161623 + AT_rich Low_complexity Low_complexity 1 23 0 911 265 170 16 chr18 8516055 8516603 -78160945 + L2 LINE L2 2703 3312 -1 313 351 44 9 chr18 8517339 8517453 -78160095 - MIR SINE MIR -63 145 28 245 284 34 0 chr18 8518544 8518632 -78158916 + L2 LINE L2 3223 3313 0 315 0 0 0 chr18 8518805 8518840 -78158708 + (TATAA)n Simple_repeat Simple_repeat 1 35 0 478 230 61 61 chr18 8519485 8519650 -78157898 + MLT1J1 LTR MaLR 40 204 -242 250 317 48 14 chr18 8519689 8519834 -78157714 + MLT1J2 LTR MaLR 299 448 -2 180 77 0 0 chr18 8519964 8519990 -78157558 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 390 291 112 88 chr18 8519994 8520897 -78156651 + HAL1 LINE L1 95 1019 -1488 806 229 139 10 chr18 8520926 8521227 -78156321 + L1MCc LINE L1 21 360 -6063 1547 195 0 0 chr18 8521333 8521590 -78155958 + AluSx SINE Alu 1 257 -55 726 239 51 130 chr18 8521596 8521982 -78155566 + L1MCc LINE L1 2191 2471 -4651 1891 169 7 0 chr18 8521982 8522290 -78155258 + AluSx SINE Alu 2 311 -1 726 239 51 130 chr18 8522290 8522770 -78154778 + L1MCc LINE L1 2471 2988 -4134 1211 233 54 25 chr18 8522775 8523317 -78154231 + L1MCc LINE L1 3031 3613 -3328 676 270 32 11 chr18 8523306 8523591 -78153957 + L1MCc LINE L1 4264 4554 -2387 * 1426 175 22 0 chr18 8523591 8523820 -78153728 - AluJo SINE Alu -76 236 3 1747 216 84 12 chr18 8523883 8524565 -78152983 + L1MB5 LINE L1 4747 5472 -706 312 231 97 81 chr18 8524588 8524774 -78152774 + HAL1 LINE L1 1402 1590 -917 337 215 144 5 chr18 8524778 8524973 -78152575 + HAL1 LINE L1 1974 2195 -312 6675 204 41 18 chr18 8525161 8525929 -78151619 - L1 LINE L1 -824 5322 4573 5375 122 21 6 chr18 8525929 8527371 -78150177 - L1PA15 LINE L1 -5 6160 4713 6675 204 41 18 chr18 8527371 8528402 -78149146 - L1 LINE L1 -1573 4573 3481 23 33 0 0 chr18 8528422 8528452 -78149096 + AT_rich Low_complexity Low_complexity 1 30 0 13286 44 0 6 chr18 8528771 8531180 -78146368 + L1PA6 LINE L1 3736 6144 -10 2187 221 8 8 chr18 8531192 8531707 -78145841 + L1MB5 LINE L1 5652 6166 -8 1530 233 50 14 chr18 8531709 8532206 -78145342 + L1M4 LINE L1 4398 4912 -1234 2392 104 0 0 chr18 8533304 8533613 -78143935 - AluSx SINE Alu -2 310 2 2472 58 0 0 chr18 8534110 8534402 -78143146 + AluY SINE Alu 1 292 -19 2778 10 0 0 chr18 8534918 8535219 -78142329 + AluYa5 SINE Alu 1 301 -10 63 36 0 0 chr18 8536226 8536310 -78141238 + AT_rich Low_complexity Low_complexity 1 84 0 211 323 19 56 chr18 8536530 8536691 -78140857 - MIR SINE MIR -46 216 62 573 51 0 13 chr18 8537370 8537449 -78140099 + MADE1 DNA Mariner 1 78 -2 345 284 115 46 chr18 8538012 8538367 -78139181 + L2 LINE L2 2847 3311 -2 25 31 0 0 chr18 8538863 8538895 -78138653 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr18 8539959 8539980 -78137568 + AT_rich Low_complexity Low_complexity 1 21 0 754 175 11 0 chr18 8540511 8540781 -78136767 + L1MA7 LINE L1 5912 6290 -1 1792 104 112 0 chr18 8540792 8541051 -78136497 - AluSg SINE Alu -22 288 1 268 287 110 47 chr18 8541287 8541441 -78136107 - L1M4 LINE L1 -926 5220 5077 2190 133 0 3 chr18 8541441 8541749 -78135799 - AluSx SINE Alu -5 307 1 268 287 110 47 chr18 8541749 8542002 -78135546 - L1M4 LINE L1 -1069 5077 4787 2232 109 3 0 chr18 8542481 8542774 -78134774 + AluSx SINE Alu 1 294 -18 563 249 27 75 chr18 8542976 8543310 -78134238 - L1MC4 LINE L1 -178 7864 7547 1026 392 7 59 chr18 8543325 8543631 -78133917 - AluSx SINE Alu -2 310 21 721 208 52 19 chr18 8543644 8543856 -78133692 - L1MC4 LINE L1 -502 7540 7322 1197 277 124 24 chr18 8543911 8544698 -78132850 - L1MC4a LINE L1 -1190 6618 5753 287 263 42 59 chr18 8545717 8545835 -78131713 - MIR SINE MIR -69 139 24 426 225 72 9 chr18 8547313 8547424 -78130124 - MIR SINE MIR -32 230 113 29 47 0 0 chr18 8547526 8547569 -78129979 + AT_rich Low_complexity Low_complexity 1 43 0 2320 91 0 3 chr18 8547884 8548182 -78129366 + AluSx SINE Alu 1 297 -15 387 263 140 53 chr18 8548705 8548776 -78128772 - MIR SINE MIR -12 250 187 2296 82 0 0 chr18 8548776 8549079 -78128469 + AluSc SINE Alu 1 303 0 387 263 140 53 chr18 8549079 8549234 -78128314 - MIR SINE MIR -75 187 3 244 381 41 26 chr18 8549235 8549429 -78128119 - L2 LINE L2 -680 2634 2438 207 0 0 0 chr18 8550267 8550290 -78127258 + (T)n Simple_repeat Simple_repeat 1 23 0 224 273 39 47 chr18 8552905 8553033 -78124515 - MIR SINE MIR -29 233 107 203 323 10 31 chr18 8553367 8553463 -78124085 - L2 LINE L2 -1565 1749 1656 2494 80 3 0 chr18 8553487 8553799 -78123749 - AluSp SINE Alu 0 313 1 568 107 0 0 chr18 8555120 8555204 -78122344 - L1P4 LINE L1 -406 5760 5677 1348 70 10 0 chr18 8555205 8555406 -78122142 - L1P4 LINE L1 -648 5518 5316 188 108 0 27 chr18 8555421 8555458 -78122090 + (TTCTCC)n Simple_repeat Simple_repeat 4 39 0 4512 209 15 7 chr18 8555463 8556571 -78120977 - L1P4 LINE L1 -813 5333 4217 226 276 67 19 chr18 8558390 8558495 -78119053 - MER5A DNA MER1_type -3 186 77 2054 125 13 3 chr18 8558843 8559146 -78118402 + AluSc SINE Alu 1 306 -3 512 271 91 15 chr18 8559435 8559634 -78117914 - MIR SINE MIR 0 262 49 326 197 48 88 chr18 8560259 8560352 -78117196 + L1ME4a LINE L1 5520 5606 -515 2255 115 0 0 chr18 8560352 8560648 -78116900 + AluSq SINE Alu 1 296 -17 326 197 48 88 chr18 8560648 8560701 -78116847 + L1ME4a LINE L1 5606 5660 -461 354 267 87 81 chr18 8560764 8561157 -78116391 + L1ME4a LINE L1 5725 6119 -2 1987 145 44 17 chr18 8561548 8561954 -78115594 + L1MA7 LINE L1 5875 6291 0 189 174 65 0 chr18 8562001 8562047 -78115501 - L2 LINE L2 0 3313 3265 242 239 145 51 chr18 8562075 8562213 -78115335 + L1ME4a LINE L1 5952 6102 -19 2123 125 7 0 chr18 8562493 8562818 -78114730 + AluSx SINE Alu 1 327 0 190 287 158 20 chr18 8563873 8563974 -78113574 + L2 LINE L2 3192 3306 -7 2258 99 0 3 chr18 8563976 8564268 -78113280 + AluSq SINE Alu 3 293 -20 23 54 0 0 chr18 8564581 8564618 -78112930 + AT_rich Low_complexity Low_complexity 1 37 0 186 133 0 0 chr18 8564665 8564695 -78112853 + (TG)n Simple_repeat Simple_repeat 1 30 0 2283 92 16 0 chr18 8565032 8565337 -78112211 + AluY SINE Alu 2 311 0 184 317 0 49 chr18 8566242 8566324 -78111224 - L2 LINE L2 -100 3172 3095 922 178 17 128 chr18 8566878 8567238 -78110310 + L1MA7 LINE L1 5972 6291 0 646 232 42 0 chr18 8569648 8569790 -78107758 + MER5A DNA MER1_type 42 189 0 849 196 21 42 chr18 8569891 8570080 -78107468 + MER5A DNA MER1_type 5 189 0 188 354 15 0 chr18 8570283 8570348 -78107200 - L2 LINE L2 -529 2785 2720 327 289 181 31 chr18 8570719 8571144 -78106404 - L2 LINE L2 -939 2375 1887 1578 129 39 23 chr18 8571569 8572097 -78105451 + MER4A LTR ERV1 1 660 -4 266 339 32 32 chr18 8572099 8572223 -78105325 - L2 LINE L2 -27 3286 3163 510 247 32 50 chr18 8572316 8572535 -78105013 - L2 LINE L2 -5 3308 3094 338 290 1 14 chr18 8572578 8572732 -78104816 + L1MDa LINE L1 1803 1997 -4588 1648 21 0 0 chr18 8572837 8573028 -78104520 + L1PA2 LINE L1 5959 6149 -6 305 303 67 45 chr18 8573064 8573242 -78104306 - L1M4 LINE L1 -1188 4958 4777 344 293 42 32 chr18 8573356 8573667 -78103881 - L1M4 LINE L1 -1628 4518 4205 297 185 0 0 chr18 8573722 8573787 -78103761 + (TA)n Simple_repeat Simple_repeat 2 66 0 228 307 68 62 chr18 8573788 8574319 -78103229 - L1M4 LINE L1 -1949 4197 3664 203 146 24 0 chr18 8575049 8575090 -78102458 + GA-rich Low_complexity Low_complexity 6 47 0 2051 197 64 17 chr18 8576301 8576783 -78100765 + MLT1D LTR MaLR 1 505 0 476 341 94 66 chr18 8577876 8578674 -78098874 - L2 LINE L2 -2 3270 2466 27 29 0 0 chr18 8579214 8579248 -78098300 + AT_rich Low_complexity Low_complexity 1 34 0 522 293 16 64 chr18 8579401 8579589 -78097959 - MIR SINE MIR -50 212 34 526 233 12 82 chr18 8581009 8581254 -78096294 + L1MC4 LINE L1 6463 6690 -1352 1548 160 21 4 chr18 8581254 8581535 -78096013 + MER65C LTR ERV1 1 286 -175 333 0 0 0 chr18 8581543 8581580 -78095968 + (TTA)n Simple_repeat Simple_repeat 2 38 0 998 92 8 0 chr18 8581584 8581715 -78095833 - AluSc SINE Alu -29 280 149 2437 68 0 0 chr18 8581817 8582111 -78095437 - AluY SINE Alu -17 294 1 901 109 16 65 chr18 8582111 8582163 -78095385 + MER65C LTR ERV1 276 329 -132 2227 107 7 10 chr18 8582163 8582500 -78095048 + AluSx SINE Alu 1 312 0 901 109 16 65 chr18 8582500 8582631 -78094917 + MER65C LTR ERV1 329 450 -11 286 102 0 61 chr18 8583148 8583197 -78094351 + LTR57-int LTR ERVL 303 348 -4995 612 276 25 15 chr18 8583492 8583688 -78093860 + MER34 LTR ERV1 65 262 -280 320 111 79 0 chr18 8583766 8583829 -78093719 + MER65-int LTR ERV1 1561 1628 -3243 1260 184 5 5 chr18 8583830 8584042 -78093506 + AluJo SINE Alu 89 300 -12 2747 205 49 26 chr18 8584060 8584893 -78092655 + MER65-int LTR ERV1 1643 2494 -2377 364 155 25 42 chr18 8585001 8585110 -78092438 + MER65-int LTR ERV1 2409 3838 -2509 466 286 28 32 chr18 8585128 8585371 -78092177 + MER65-int LTR ERV1 2337 4184 -2550 1204 166 85 94 chr18 8585614 8585895 -78091653 + MER65-int LTR ERV1 3499 3781 -2550 1743 176 30 3 chr18 8585895 8586197 -78091351 - AluJo SINE Alu -2 310 1 1204 166 85 94 chr18 8586197 8586492 -78091056 + MER65-int LTR ERV1 3781 4092 -2239 2250 120 0 7 chr18 8586499 8586808 -78090740 - AluSx SINE Alu -4 308 2 1086 265 60 9 chr18 8586814 8587146 -78090402 + MER65-int LTR ERV1 3680 4028 -843 3408 152 26 2 chr18 8587345 8587971 -78089577 + L1 LINE L1 4657 5297 -849 401 249 47 12 chr18 8587978 8588147 -78089401 + L1MA4 LINE L1 6126 6300 0 2324 176 6 38 chr18 8588661 8589137 -78088411 + MER65C LTR ERV1 1 461 0 1470 195 92 8 chr18 8589144 8589514 -78088034 + L1MC4 LINE L1 6676 7076 -966 2185 236 52 10 chr18 8589536 8590154 -78087394 + L1MC4 LINE L1 7259 7902 -140 243 0 0 0 chr18 8590695 8590722 -78086826 + (CAAAA)n Simple_repeat Simple_repeat 1 27 0 2003 136 7 0 chr18 8590973 8591292 -78086256 + AluSq SINE Alu 1 321 0 360 0 0 0 chr18 8591291 8591331 -78086217 + (TC)n Simple_repeat Simple_repeat 2 41 0 216 0 0 0 chr18 8591330 8591354 -78086194 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 760 115 16 0 chr18 8591766 8591888 -78085660 + MSTA LTR MaLR 1 124 -304 1234 175 34 11 chr18 8593275 8593544 -78084004 + L1MD3 LINE L1 7721 7995 0 454 278 100 56 chr18 8593805 8594345 -78083203 - L1ME4a LINE L1 -240 5881 5318 2240 85 0 3 chr18 8594577 8594859 -78082689 + AluSq SINE Alu 1 281 -32 228 35 0 0 chr18 8594859 8594888 -78082660 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 282 303 76 42 chr18 8595423 8595542 -78082006 + MIR SINE MIR 22 144 -118 1812 164 0 7 chr18 8595665 8595958 -78081590 - AluJb SINE Alu -21 291 1 529 281 171 20 chr18 8598089 8598480 -78079068 + Charlie7 DNA MER1_type 20 469 -2143 787 245 92 54 chr18 8598549 8598689 -78078859 + Charlie7 DNA MER1_type 1759 1892 -720 1941 141 0 27 chr18 8598689 8598987 -78078561 + AluSg SINE Alu 1 290 -20 787 245 92 54 chr18 8598987 8599103 -78078445 + Charlie7 DNA MER1_type 1892 2002 -610 2163 115 16 13 chr18 8599103 8599407 -78078141 - AluSx SINE Alu -7 305 1 787 245 92 54 chr18 8599407 8599594 -78077954 + Charlie7 DNA MER1_type 2002 2220 -392 332 265 0 29 chr18 8599608 8599710 -78077838 - MER81 DNA DNA -15 99 1 2091 83 0 7 chr18 8599749 8600026 -78077522 + AluSq SINE Alu 34 308 -5 366 305 177 7 chr18 8600431 8600572 -78076976 - MER5A DNA MER1_type -16 173 9 682 299 16 16 chr18 8601198 8601382 -78076166 + MIR3 SINE MIR 10 193 -15 454 309 16 43 chr18 8602752 8602940 -78074608 - MIR3 SINE MIR -24 184 2 2344 86 0 20 chr18 8603136 8603438 -78074110 + AluSc SINE Alu 1 296 -13 546 275 97 51 chr18 8604288 8604659 -78072889 + L1MC4a LINE L1 5510 5897 -1911 1109 144 33 0 chr18 8605926 8606107 -78071441 - MER5A DNA MER1_type 0 189 3 1573 148 22 26 chr18 8606811 8607122 -78070426 + MLT2D LTR ERVL 68 377 -37 216 320 62 51 chr18 8608305 8608480 -78069068 + L2 LINE L2 2262 2438 -876 555 320 33 0 chr18 8608480 8608661 -78068887 + MER91A DNA MER1_type 1 187 -9 402 353 74 41 chr18 8608858 8609221 -78068327 + L2 LINE L2 2888 3262 -10 441 0 0 0 chr18 8610021 8610070 -78067478 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 297 318 8 8 chr18 8610899 8611025 -78066523 - MER94 DNA DNA -8 126 1 482 288 133 9 chr18 8611388 8611621 -78065927 - MIR SINE MIR 0 262 1 1163 254 13 16 chr18 8612015 8612395 -78065153 + L1PBa LINE L1 1345 1633 -5230 * 9943 204 45 19 chr18 8612377 8612986 -78064562 + L1PB3 LINE L1 12 604 -5599 252 0 0 0 chr18 8612986 8613014 -78064534 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 9943 204 45 19 chr18 8613014 8617388 -78060160 + L1PB3 LINE L1 604 5372 -831 3765 127 48 5 chr18 8617389 8618029 -78059519 + L1PB3 LINE L1 5542 6209 -2 301 133 0 40 chr18 8618041 8618061 -78059487 + (GGAAA)n Simple_repeat Simple_repeat 3 22 -52 1280 196 82 14 chr18 8618061 8618342 -78059206 + AluJb SINE Alu 5 304 -8 301 133 0 40 chr18 8618342 8618396 -78059152 + (GGAAA)n Simple_repeat Simple_repeat 22 74 0 * 672 119 0 0 chr18 8618385 8618494 -78059054 + (GGAA)n Simple_repeat Simple_repeat 3 111 0 1324 114 14 14 chr18 8618494 8618704 -78058844 + L1MA2 LINE L1 5652 5861 -444 767 112 40 0 chr18 8618706 8618831 -78058717 + L1MA2 LINE L1 5979 6108 -196 2552 121 78 5 chr18 8618833 8619230 -78058318 + MSTA LTR MaLR 3 428 0 6732 172 34 19 chr18 8619230 8620474 -78057074 + MSTA-int LTR MaLR 1 1262 -389 282 246 88 79 chr18 8620704 8620818 -78056730 + MLT1H LTR MaLR 424 538 -11 814 223 99 4 chr18 8620818 8621060 -78056488 + L1ME3A LINE L1 5300 5564 -600 383 245 72 31 chr18 8621166 8621342 -78056206 + L1ME3A LINE L1 5717 5912 -252 738 194 0 0 chr18 8621342 8621466 -78056082 - FLAM_A SINE Alu -9 124 1 383 245 72 31 chr18 8621466 8621504 -78056044 + L1ME3A LINE L1 5912 5947 -217 217 357 0 0 chr18 8622828 8622898 -78054650 - MIR SINE MIR -25 237 168 780 260 113 58 chr18 8622994 8623524 -78054024 + L1ME3A LINE L1 5374 5932 -238 293 328 0 0 chr18 8624271 8624332 -78053216 - MIR SINE MIR -103 105 45 1290 239 70 82 chr18 8624914 8625124 -78052424 - L1ME3A LINE L1 -13 6157 5946 2505 71 0 0 chr18 8625124 8625435 -78052113 - AluY SINE Alu 0 311 1 1290 239 70 82 chr18 8625435 8625480 -78052068 - L1ME3A LINE L1 -224 5946 5902 2483 108 55 26 chr18 8625480 8625896 -78051652 - MSTC LTR MaLR 0 428 1 1290 239 70 82 chr18 8625896 8626194 -78051354 - L1ME3A LINE L1 -268 5902 5610 1735 202 52 42 chr18 8626194 8626694 -78050854 - MLT1D LTR MaLR 0 505 1 480 288 97 68 chr18 8627430 8627927 -78049621 + L1MEd LINE L1 640 1150 -4969 223 389 56 7 chr18 8627941 8628085 -78049463 - L2 LINE L2 -63 3209 3059 708 297 66 18 chr18 8628424 8628833 -78048715 + MLT1K LTR MaLR 137 586 -2 198 103 0 0 chr18 8628852 8628881 -78048667 + (CAG)n Simple_repeat Simple_repeat 2 30 0 22 94 0 0 chr18 8629046 8629110 -78048438 + AT_rich Low_complexity Low_complexity 1 64 0 2367 81 0 7 chr18 8629275 8629573 -78047975 + AluSc SINE Alu 1 296 -13 1504 268 113 28 chr18 8630004 8630649 -78046899 + HsTC2a DNA Tc2 24 723 -21 2199 130 0 0 chr18 8631062 8631370 -78046178 - AluSx SINE Alu -1 311 4 2056 133 35 37 chr18 8631552 8631928 -78045620 + THE1C LTR MaLR 1 375 0 514 257 165 58 chr18 8632758 8633260 -78044288 + L1MEc LINE L1 797 1222 -4983 1180 265 107 30 chr18 8633266 8633734 -78043814 + L1ME3A LINE L1 5644 6147 -23 353 294 19 77 chr18 8633763 8634140 -78043408 + L1MEc LINE L1 1353 1707 -4689 286 191 0 36 chr18 8634140 8634224 -78043324 + GA-rich Low_complexity Low_complexity 4 84 0 351 296 51 0 chr18 8634244 8634342 -78043206 + L1MEc LINE L1 1715 1817 -4579 2030 266 89 38 chr18 8634539 8636122 -78041426 + L1MEc LINE L1 2157 3791 -2424 13018 218 46 33 chr18 8636150 8639364 -78038184 + L1MA10 LINE L1 1 3171 -3227 2277 90 10 7 chr18 8639364 8639664 -78037884 + AluY SINE Alu 1 301 -10 13018 218 46 33 chr18 8639664 8641070 -78036478 + L1MA10 LINE L1 3171 4557 -1841 1691 119 7 90 chr18 8641070 8641411 -78036137 + AluSx SINE Alu 1 315 0 13018 218 46 33 chr18 8641411 8642086 -78035462 + L1MA10 LINE L1 4557 5222 -1176 303 71 0 0 chr18 8642086 8642128 -78035420 + (TA)n Simple_repeat Simple_repeat 2 43 0 13018 218 46 33 chr18 8642128 8643505 -78034043 + L1MA10 LINE L1 5222 6382 -16 2489 268 88 29 chr18 8643499 8645429 -78032119 + L1MEc LINE L1 3899 5984 -255 * 1641 178 38 7 chr18 8645429 8645721 -78031827 + AluJo SINE Alu 1 301 -11 2489 268 88 29 chr18 8645721 8645988 -78031560 + L1MEc LINE L1 5984 6234 -5 3936 177 44 11 chr18 8646002 8646892 -78030656 + L1MB4 LINE L1 4904 5840 -340 1982 129 0 17 chr18 8646892 8647186 -78030362 + AluSx SINE Alu 1 289 -23 3936 177 44 11 chr18 8647186 8647412 -78030136 + L1MB4 LINE L1 5840 6057 -123 3000 159 20 2 chr18 8647512 8647716 -78029832 + L1MB3 LINE L1 5625 5824 -359 2072 123 0 14 chr18 8647716 8648009 -78029539 + AluSx SINE Alu 1 289 -23 3000 159 20 2 chr18 8648009 8648346 -78029202 + L1MB3 LINE L1 5824 6176 -7 2622 37 0 0 chr18 8648358 8648657 -78028891 - AluY SINE Alu -12 299 1 466 119 0 0 chr18 8648667 8648734 -78028814 - FLAM SINE Alu -18 125 59 759 195 15 10 chr18 8648839 8649034 -78028514 + L1MA7 LINE L1 6095 6290 -1 643 168 18 0 chr18 8651980 8652093 -78025455 - FLAM_C SINE Alu -20 123 9 365 257 26 26 chr18 8652706 8652819 -78024729 + LTR67 LTR ERVL 63 175 -382 6168 137 12 3 chr18 8653618 8655278 -78022270 + L1MA2 LINE L1 4197 5873 -431 1017 114 0 0 chr18 8655303 8655452 -78022096 + L1MA2 LINE L1 6156 6304 0 2513 126 135 4 chr18 8656545 8657005 -78020543 - Tigger3(Golem) DNA MER2_type -1 3028 2509 900 185 0 77 chr18 8657011 8657206 -78020342 - Tigger3(Golem) DNA MER2_type -2848 181 2 298 298 9 79 chr18 8658210 8658324 -78019224 + MIR3 SINE MIR 83 188 -20 327 250 106 19 chr18 8658395 8658499 -78019049 - MIR3 SINE MIR -51 157 45 1938 136 52 0 chr18 8659293 8659579 -78017969 + AluSx SINE Alu 1 301 -11 1742 171 3 7 chr18 8660203 8660496 -78017052 + AluJo SINE Alu 1 292 -20 1402 174 3 104 chr18 8660826 8661154 -78016394 + AluJo SINE Alu 7 301 -11 208 277 0 0 chr18 8661192 8661239 -78016309 + (CAG)n Simple_repeat Simple_repeat 2 48 0 194 352 11 11 chr18 8661318 8661406 -78016142 - MIR SINE MIR -155 107 20 1494 180 71 3 chr18 8661959 8662242 -78015306 + AluJo SINE Alu 1 302 -10 368 168 28 28 chr18 8662242 8662349 -78015199 + G-rich Low_complexity Low_complexity 4 110 0 519 175 16 16 chr18 8662351 8662477 -78015071 + A-rich Low_complexity Low_complexity 1 126 0 324 357 1 11 chr18 8662690 8662816 -78014732 - MIR SINE MIR -82 126 3 628 309 86 0 chr18 8663677 8663910 -78013638 - MIR SINE MIR -2 260 8 331 269 0 0 chr18 8664103 8664170 -78013378 + Charlie1 DNA MER1_type 5 71 -2690 * 1798 192 25 7 chr18 8664168 8664575 -78012973 + Charlie1 DNA MER1_type 2343 2756 -5 24 0 0 0 chr18 8665071 8665095 -78012453 + AT_rich Low_complexity Low_complexity 1 24 0 22 56 0 0 chr18 8666267 8666303 -78011245 + AT_rich Low_complexity Low_complexity 1 36 0 192 246 46 0 chr18 8667964 8668029 -78009519 - MIR SINE MIR -63 199 132 587 192 51 26 chr18 8668585 8668741 -78008807 - MIR SINE MIR -19 243 84 2283 105 0 7 chr18 8668875 8669179 -78008369 + AluSx SINE Alu 1 302 -10 752 197 0 7 chr18 8669458 8669600 -78007948 + MER20 DNA MER1_type 78 218 -1 2365 106 0 0 chr18 8669971 8670274 -78007274 + AluSx SINE Alu 5 307 -5 25 0 0 0 chr18 8670925 8670950 -78006598 + AT_rich Low_complexity Low_complexity 1 25 0 726 231 36 36 chr18 8671150 8671371 -78006177 - MER58A DNA MER1_type -3 221 1 1274 221 24 106 chr18 8672096 8672589 -78004959 + LTR40c LTR ERVL 1 453 -12 384 244 16 49 chr18 8672712 8672835 -78004713 - MER94 DNA DNA -15 119 1 636 278 26 0 chr18 8674202 8674396 -78003152 + MIR SINE MIR 31 229 -33 243 292 0 14 chr18 8675662 8675734 -78001814 + L2 LINE L2 3241 3311 -2 396 327 56 34 chr18 8676019 8676496 -78001052 + L2 LINE L2 2722 3213 -100 1840 158 13 10 chr18 8676496 8676794 -78000754 + AluJb SINE Alu 1 299 -13 396 327 56 34 chr18 8676794 8676894 -78000654 + L2 LINE L2 3213 3309 -4 34121 101 8 53 chr18 8677357 8683805 -77993743 - L1PA7 LINE L1 0 6154 12 299 305 9 17 chr18 8683997 8684143 -77993405 + MER5A DNA MER1_type 47 178 0 233 237 0 31 chr18 8684295 8684392 -77993156 + (CATATA)n Simple_repeat Simple_repeat 3 96 0 1001 199 59 70 chr18 8684623 8684895 -77992653 + MLT1F1 LTR MaLR 6 274 -293 1792 180 0 0 chr18 8685159 8685454 -77992094 + AluJo SINE Alu 1 295 -17 779 274 222 14 chr18 8686444 8687155 -77990393 - L2 LINE L2 -1 3312 2442 387 248 8 17 chr18 8688028 8688145 -77989403 + L1ME LINE L1 5367 5482 -682 24 32 0 0 chr18 8689105 8689136 -77988412 + AT_rich Low_complexity Low_complexity 1 31 0 13090 193 34 21 chr18 8689136 8691792 -77985756 + L1PB3 LINE L1 2443 5062 -1800 252 0 0 0 chr18 8691792 8691820 -77985728 + (CTA)n Simple_repeat Simple_repeat 1 28 0 13090 193 34 21 chr18 8691820 8692306 -77985242 + L1PB3 LINE L1 5062 5540 -1322 2124 134 0 7 chr18 8692306 8692604 -77984944 + AluSx SINE Alu 1 296 -16 13090 193 34 21 chr18 8692604 8692843 -77984705 + L1PB3 LINE L1 5540 5876 -986 1625 169 3 7 chr18 8692843 8693124 -77984424 + L1PB3 LINE L1 6582 6870 0 235 273 30 0 chr18 8693510 8693576 -77983972 - MIR SINE MIR -6 256 189 836 250 182 48 chr18 8693583 8694225 -77983323 + L2 LINE L2 2383 3163 -150 2291 128 0 0 chr18 8694225 8694537 -77983011 + AluSx SINE Alu 1 312 0 836 250 182 48 chr18 8694537 8694711 -77982837 + L2 LINE L2 3163 3312 -1 22 35 0 0 chr18 8694761 8694790 -77982758 + AT_rich Low_complexity Low_complexity 1 29 0 647 164 53 66 chr18 8695097 8695249 -77982299 + AluJb SINE Alu 137 286 -26 22 0 0 0 chr18 8695249 8695271 -77982277 + AT_rich Low_complexity Low_complexity 1 22 0 213 235 0 0 chr18 8696838 8696889 -77980659 - MIR SINE MIR -44 218 168 1942 149 3 34 chr18 8697606 8697927 -77979621 + AluJo SINE Alu 1 311 -1 475 138 11 11 chr18 8698146 8698233 -77979315 + AluJ/FRAM SINE Alu 214 300 -12 21 0 0 0 chr18 8698781 8698802 -77978746 + GC_rich Low_complexity Low_complexity 1 21 0 2022 133 7 0 chr18 8699199 8699501 -77978047 + AluSg SINE Alu 3 306 -4 1862 177 0 7 chr18 8700456 8700750 -77976798 - AluJb SINE Alu -19 293 2 229 396 0 0 chr18 8702292 8702393 -77975155 + L3 LINE CR1 1460 1560 -17 1517 254 51 74 chr18 8703082 8703749 -77973799 + MER20B DNA MER1_type 98 750 -33 4015 89 2 2 chr18 8703749 8704290 -77973258 + L1PB2 LINE L1 5606 6146 -5 1517 254 51 74 chr18 8704290 8704324 -77973224 + MER20B DNA MER1_type 750 783 0 1788 163 3 31 chr18 8704714 8705033 -77972515 - AluJo SINE Alu 0 312 3 618 206 57 91 chr18 8706590 8706799 -77970749 + MER20 DNA MER1_type 18 219 0 244 226 48 0 chr18 8707778 8707840 -77969708 - L2 LINE L2 -19 3253 3189 2149 124 16 0 chr18 8708709 8709016 -77968532 - AluSx SINE Alu 0 312 1 327 266 101 21 chr18 8709886 8710123 -77967425 + L2 LINE L2 2383 2638 -676 200 324 40 0 chr18 8710425 8710499 -77967049 + L2 LINE L2 3137 3213 -59 1743 97 35 0 chr18 8712031 8712288 -77965260 - L1PA13 LINE L1 -4 6159 5894 967 168 37 37 chr18 8712951 8713142 -77964406 + AluJb SINE Alu 110 300 -12 24 32 0 0 chr18 8714613 8714644 -77962904 + GC_rich Low_complexity Low_complexity 1 31 0 32 95 0 0 chr18 8714926 8715021 -77962527 + GC_rich Low_complexity Low_complexity 1 95 0 201 300 29 29 chr18 8715437 8715507 -77962041 - L2 LINE L2 -45 3268 3199 2305 106 6 0 chr18 8716004 8716315 -77961233 + AluSq SINE Alu 1 313 0 1747 181 3 13 chr18 8717562 8717872 -77959676 - AluJb SINE Alu -5 307 1 1232 164 5 0 chr18 8717955 8718150 -77959398 - AluJb SINE Alu -12 300 105 744 209 0 0 chr18 8718547 8718686 -77958862 - FLAM_C SINE Alu -2 141 3 14251 124 11 43 chr18 8719234 8719352 -77958196 - Tigger1 DNA MER2_type 0 2418 2298 7888 14 0 0 chr18 8719352 8720437 -77957111 + L1PA3 LINE L1 5071 6155 0 14251 124 11 43 chr18 8720437 8720960 -77956588 - Tigger1 DNA MER2_type -120 2298 1760 1374 174 35 61 chr18 8720960 8721271 -77956277 - AluJo SINE Alu -9 303 1 14251 124 11 43 chr18 8721271 8723127 -77954421 - Tigger1 DNA MER2_type -658 1760 1 5651 142 61 54 chr18 8724368 8724949 -77952599 + Tigger3b DNA MER2_type 1 576 -2452 1580 134 10 80 chr18 8724949 8725248 -77952300 + AluJo SINE Alu 17 294 -18 180 0 0 0 chr18 8725248 8725268 -77952280 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 5651 142 61 54 chr18 8725268 8725907 -77951641 + Tigger3b DNA MER2_type 575 1231 0 391 252 65 0 chr18 8725910 8726017 -77951531 + MER21B LTR ERV1 1 114 -749 1156 233 83 32 chr18 8726038 8726411 -77951137 + MER21B LTR ERV1 391 782 -81 2347 154 199 11 chr18 8726611 8727158 -77950390 - LTR51 LTR ERV1 0 671 22 476 273 192 48 chr18 8727215 8727695 -77949853 + MLT1H LTR MaLR 1 549 0 722 173 8 8 chr18 8727814 8727947 -77949601 + FLAM_C SINE Alu 1 133 0 1728 187 0 0 chr18 8728418 8728718 -77948830 - AluJo SINE Alu -12 300 1 206 32 32 0 chr18 8729876 8729907 -77947641 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1912 91 47 11 chr18 8729910 8730184 -77947364 - AluSx SINE Alu -28 284 1 1708 175 3 17 chr18 8730710 8731002 -77946546 - AluJo SINE Alu -24 288 1 2096 136 0 19 chr18 8731011 8731327 -77946221 - AluSx SINE Alu -2 310 1 444 282 94 64 chr18 8731347 8731613 -77945935 - L1M4 LINE L1 -1997 4149 3876 549 147 0 0 chr18 8732228 8732323 -77945225 + (TG)n Simple_repeat Simple_repeat 2 96 0 2273 92 0 10 chr18 8733143 8733446 -77944102 - AluSx SINE Alu -12 300 1 29 70 0 0 chr18 8734069 8734126 -77943422 + AT_rich Low_complexity Low_complexity 1 57 0 1265 175 71 12 chr18 8734187 8734439 -77943109 - AluJo SINE Alu -12 300 34 22 0 0 0 chr18 8734947 8734969 -77942579 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 8735788 8735810 -77941738 + AT_rich Low_complexity Low_complexity 1 22 0 395 270 68 77 chr18 8735875 8736116 -77941432 - L1ME LINE L1 -319 5851 5619 711 194 7 14 chr18 8736277 8736421 -77941127 - FLAM_C SINE Alu 0 143 1 886 125 0 15 chr18 8736702 8736838 -77940710 - FLAM_C SINE Alu -2 141 8 2430 82 10 0 chr18 8737076 8737380 -77940168 - AluSg SINE Alu -3 307 1 267 271 8 34 chr18 8737603 8737721 -77939827 + (TA)n Simple_repeat Simple_repeat 1 115 0 254 311 79 14 chr18 8738404 8738684 -77938864 - L1ME LINE L1 -805 5341 5044 283 202 67 0 chr18 8738928 8739017 -77938531 - L1ME LINE L1 -1438 4708 4614 2107 128 0 0 chr18 8739598 8739895 -77937653 + AluSg SINE Alu 1 297 -13 545 281 15 41 chr18 8740134 8740330 -77937218 + MIR SINE MIR 72 262 0 807 149 8 22 chr18 8740492 8740626 -77936922 - FLAM_C SINE Alu -1 132 1 365 216 80 24 chr18 8740673 8740798 -77936750 - L1 LINE L1 -1780 4366 4235 941 220 25 21 chr18 8740893 8741134 -77936414 - MLT1J LTR MaLR -4 507 266 305 303 136 8 chr18 8741284 8741416 -77936132 - MIR SINE MIR -3 259 111 466 118 12 12 chr18 8741845 8741930 -77935618 + (TTTC)n Simple_repeat Simple_repeat 2 86 0 311 226 46 0 chr18 8742444 8742536 -77935012 + MIR SINE MIR 81 178 -30 1687 196 98 28 chr18 8742649 8742995 -77934553 + LOR1b LTR ERV1 1 384 -77 2363 160 36 2 chr18 8742995 8743407 -77934141 + MSTB LTR MaLR 1 426 0 1687 196 98 28 chr18 8743407 8743489 -77934059 + LOR1b LTR ERV1 384 459 -2 3146 177 71 13 chr18 8744379 8745013 -77932535 - LTR51 LTR ERV1 0 671 1 690 309 25 5 chr18 8745102 8745306 -77932242 + MIR SINE MIR 29 236 -26 228 111 0 0 chr18 8745306 8745342 -77932206 + (A)n Simple_repeat Simple_repeat 1 36 0 411 119 0 0 chr18 8746393 8746460 -77931088 + (GA)n Simple_repeat Simple_repeat 2 68 0 316 345 83 34 chr18 8746576 8746840 -77930708 - L3b LINE CR1 -145 1438 1162 475 239 26 32 chr18 8746919 8747074 -77930474 + L1PB4 LINE L1 6000 6153 -3 337 270 9 26 chr18 8747281 8747396 -77930152 + MIR SINE MIR 147 259 -3 204 273 0 0 chr18 8747401 8747445 -77930103 + (TTA)n Simple_repeat Simple_repeat 1 44 0 543 367 37 7 chr18 8748604 8748901 -77928647 + L1M4 LINE L1 4040 4345 -1801 23 78 0 0 chr18 8748906 8748957 -77928591 + AT_rich Low_complexity Low_complexity 1 51 0 1068 175 0 0 chr18 8749017 8749188 -77928360 + FRAM SINE Alu 1 168 -8 623 303 75 24 chr18 8749370 8749703 -77927845 + L2 LINE L2 2897 3246 -67 22 0 0 0 chr18 8749844 8749866 -77927682 + AT_rich Low_complexity Low_complexity 1 22 0 242 243 14 0 chr18 8750339 8750409 -77927139 + (TA)n Simple_repeat Simple_repeat 1 71 0 315 0 0 0 chr18 8750429 8750464 -77927084 + (T)n Simple_repeat Simple_repeat 1 35 0 29 0 0 0 chr18 8750917 8750946 -77926602 + AT_rich Low_complexity Low_complexity 1 29 0 210 278 0 0 chr18 8751366 8751420 -77926128 + T-rich Low_complexity Low_complexity 1 54 0 23 0 0 0 chr18 8751588 8751611 -77925937 + AT_rich Low_complexity Low_complexity 1 23 0 45 26 0 39 chr18 8751670 8751748 -77925800 + AT_rich Low_complexity Low_complexity 1 75 0 759 194 7 14 chr18 8751748 8751892 -77925656 - FLAM_C SINE Alu 0 143 1 26 0 0 27 chr18 8751916 8751935 -77925613 + AT_rich Low_complexity Low_complexity 1 20 -16 1797 174 7 0 chr18 8751935 8752229 -77925319 + AluJo SINE Alu 1 296 -16 26 0 0 27 chr18 8752229 8752246 -77925302 + AT_rich Low_complexity Low_complexity 20 36 0 582 283 50 9 chr18 8753348 8753567 -77923981 + MLT1J LTR MaLR 1 228 -283 348 361 54 0 chr18 8753608 8753774 -77923774 + MLT1J LTR MaLR 300 474 -37 935 125 109 5 chr18 8753909 8754101 -77923447 + L1MA5A LINE L1 6081 6292 -5 184 222 0 44 chr18 8754347 8754392 -77923156 + L3 LINE CR1 1171 1213 -364 687 143 38 60 chr18 8754984 8755117 -77922431 + FLAM_C SINE Alu 6 135 -8 1900 161 0 0 chr18 8755258 8755543 -77922005 - AluJb SINE Alu -23 289 5 610 152 19 0 chr18 8756334 8756439 -77921109 + U6 snRNA snRNA 1 107 0 759 265 42 19 chr18 8756939 8757199 -77920349 + L2 LINE L2 1567 1832 -1482 8185 223 45 24 chr18 8757219 8757608 -77919940 - L1MB5 LINE L1 -12 6398 6019 1877 135 7 26 chr18 8757608 8757911 -77919637 - AluJb SINE Alu -10 302 6 8185 223 45 24 chr18 8757911 8760748 -77916800 - L1MB5 LINE L1 -391 6019 3074 14898 134 24 7 chr18 8760748 8763126 -77914422 + Tigger1 DNA MER2_type 1 2418 0 8185 223 45 24 chr18 8763126 8763533 -77914015 - L1MB5 LINE L1 -3336 3074 2677 4204 234 99 23 chr18 8764422 8766273 -77911275 - L1MB5 LINE L1 -3668 2714 722 1935 221 82 15 chr18 8766316 8766854 -77910694 - L1MB2 LINE L1 -2 6169 5596 1352 192 24 59 chr18 8766859 8767198 -77910350 - L1M3 LINE L1 -486 6192 5866 4832 226 107 67 chr18 8767200 8767275 -77910273 - L1M3 LINE L1 -1604 5040 4970 219 36 0 0 chr18 8767275 8767303 -77910245 + (GTTTG)n Simple_repeat Simple_repeat 2 29 0 1930 132 11 0 chr18 8767303 8767584 -77909964 - AluSx SINE Alu -28 284 1 4832 226 107 67 chr18 8767584 8767644 -77909904 - L1M3 LINE L1 -1674 4970 4914 2288 70 0 3 chr18 8767644 8767975 -77909573 - AluY SINE Alu 0 330 1 4832 226 107 67 chr18 8767975 8768594 -77908954 - L1M3 LINE L1 -1730 4914 4322 1567 202 3 14 chr18 8768594 8768886 -77908662 - AluJo SINE Alu -23 289 1 4832 226 107 67 chr18 8768886 8769154 -77908394 - L1M3 LINE L1 -2322 4322 4066 1990 137 7 3 chr18 8769154 8769453 -77908095 - AluSx SINE Alu -12 300 1 4832 226 107 67 chr18 8769453 8772471 -77905077 - L1M3 LINE L1 -2578 4066 817 449 238 109 0 chr18 8772901 8773002 -77904546 - MER81 DNA DNA 0 114 3 943 272 167 40 chr18 8773005 8773508 -77904040 + L2 LINE L2 2129 2695 -619 494 110 17 127 chr18 8773527 8773581 -77903967 - L1MB1 LINE L1 -2 6166 6130 2026 101 4 0 chr18 8773581 8773848 -77903700 - AluY SINE Alu -4 307 40 494 110 17 127 chr18 8773848 8773911 -77903637 - L1MB1 LINE L1 -38 6130 6062 3024 169 11 4 chr18 8773911 8774436 -77903112 + L1MB1 LINE L1 5496 6024 -144 257 207 73 49 chr18 8774467 8774549 -77902999 + L2 LINE L2 2756 2839 -475 579 336 86 4 chr18 8775047 8775303 -77902245 + L2 LINE L2 222 498 -2816 297 221 128 12 chr18 8775769 8775855 -77901693 - L1ME3A LINE L1 -5 6165 6070 282 264 154 9 chr18 8775966 8776076 -77901472 - L1ME3A LINE L1 -2065 5743 5618 1678 142 101 0 chr18 8776088 8776355 -77901193 - AluJo SINE Alu -18 294 1 1066 316 33 3 chr18 8776442 8776831 -77900717 - HERV16 LTR ERVL -3570 1426 1026 553 191 9 9 chr18 8776835 8776945 -77900603 + MER53 DNA DNA 3 112 -77 1402 317 61 33 chr18 8776968 8777469 -77900079 - HERV16 LTR ERVL -3963 1033 503 666 270 9 63 chr18 8777469 8777691 -77899857 + MER63A DNA MER1_type 1 210 0 1402 317 61 33 chr18 8777691 8777940 -77899608 - HERV16 LTR ERVL -4493 503 262 520 256 104 14 chr18 8778251 8778462 -77899086 - LTR16B LTR ERVL 0 464 235 273 293 111 0 chr18 8779073 8779172 -77898376 - MIR SINE MIR -22 240 131 304 365 41 38 chr18 8779283 8779625 -77897923 - L2 LINE L2 -550 2764 2422 267 86 0 0 chr18 8780515 8780550 -77896998 + L1MA9 LINE L1 4879 4913 -1233 2034 141 20 17 chr18 8780561 8780909 -77896639 + L1PA15 LINE L1 5710 6058 -107 555 144 10 19 chr18 8781031 8781135 -77896413 + L1PA15 LINE L1 6062 6164 -1 1806 194 11 52 chr18 8781145 8781583 -77895965 + L1MA9 LINE L1 4906 5325 -821 512 141 0 0 chr18 8781605 8781676 -77895872 + FLAM_A SINE Alu 36 106 -36 765 115 53 0 chr18 8781682 8781795 -77895753 + FRAM SINE Alu 56 174 -2 3766 185 48 41 chr18 8781813 8782673 -77894875 + L1MA9 LINE L1 5417 6282 -30 26 30 0 0 chr18 8782673 8782706 -77894842 + AT_rich Low_complexity Low_complexity 1 33 0 389 302 38 0 chr18 8783938 8784044 -77893504 - L2 LINE L2 -1 3312 3203 2312 101 0 0 chr18 8784783 8785091 -77892457 - AluSc SINE Alu -1 308 1 225 326 81 21 chr18 8785243 8785479 -77892069 - LTR16C LTR ERVL -9 482 233 2064 98 33 0 chr18 8787087 8787400 -77890148 - AluSq SINE Alu 0 322 1 500 243 85 43 chr18 8787620 8787855 -77889693 + L2 LINE L2 3067 3311 -2 307 308 21 49 chr18 8788137 8788280 -77889268 - L2 LINE L2 -464 2850 2712 5574 128 63 8 chr18 8789489 8790345 -77887203 + MER4D LTR ERV1 1 903 0 977 115 39 13 chr18 8790800 8790956 -77886592 + LTR39 LTR ERV1 1 160 -623 209 250 23 0 chr18 8791149 8791193 -77886355 - L2 LINE L2 -17 3296 3252 22 56 0 0 chr18 8791204 8791240 -77886308 + AT_rich Low_complexity Low_complexity 1 36 0 530 307 34 63 chr18 8791631 8791869 -77885679 + MIR SINE MIR 32 262 0 365 307 37 43 chr18 8791917 8792125 -77885423 + MIR SINE MIR 2 212 -50 553 217 42 35 chr18 8792157 8792300 -77885248 - MLT1J LTR MaLR -7 504 361 243 227 0 0 chr18 8792585 8792630 -77884918 + polypyrimidine Low_complexity Low_complexity 1 45 0 21 36 0 0 chr18 8792697 8792725 -77884823 + AT_rich Low_complexity Low_complexity 1 28 0 2117 118 17 0 chr18 8792796 8793092 -77884456 + AluSg SINE Alu 1 301 -9 884 229 6 6 chr18 8793461 8793631 -77883917 - AluJb SINE Alu -7 305 136 387 0 0 0 chr18 8793999 8794042 -77883506 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2003 124 0 3 chr18 8794044 8794327 -77883221 - AluSx SINE Alu -30 282 1 1350 145 57 40 chr18 8795668 8795916 -77881632 - LTR39 LTR ERV1 0 783 532 2477 198 112 25 chr18 8795957 8796624 -77880924 - MER50 LTR ERV1 0 734 10 3384 160 4 6 chr18 8796634 8797166 -77880382 - LTR39 LTR ERV1 -252 531 1 306 0 0 0 chr18 8797506 8797540 -77880008 + (TG)n Simple_repeat Simple_repeat 2 35 0 592 326 52 19 chr18 8797743 8797988 -77879560 + L1MEd LINE L1 468 730 -5389 201 74 0 0 chr18 8797988 8798015 -77879533 + (CA)n Simple_repeat Simple_repeat 1 27 0 592 326 52 19 chr18 8798015 8798137 -77879411 + L1MEd LINE L1 730 847 -5272 941 206 39 37 chr18 8798171 8798641 -77878907 - L1MC4 LINE L1 -1249 6559 6139 430 229 73 34 chr18 8798668 8798847 -77878701 + L1M4 LINE L1 4091 4276 -1870 21 36 0 0 chr18 8798861 8798889 -77878659 + AT_rich Low_complexity Low_complexity 1 28 0 2617 178 28 28 chr18 8798943 8799334 -77878214 - MER66B LTR ERV1 -13 473 80 2116 118 10 0 chr18 8799334 8799653 -77877895 - AluSx SINE Alu 0 312 1 2617 178 28 28 chr18 8799653 8799734 -77877814 - MER66B LTR ERV1 -405 81 1 26 30 0 0 chr18 8799739 8799772 -77877776 + AT_rich Low_complexity Low_complexity 1 33 0 1076 290 73 33 chr18 8799777 8800445 -77877103 + L1M4 LINE L1 4399 5093 -1053 5532 142 29 43 chr18 8800456 8802056 -77875492 - L1PB3 LINE L1 0 6154 4584 2227 124 0 6 chr18 8802056 8802370 -77875178 + AluSx SINE Alu 1 312 0 5532 142 29 43 chr18 8802370 8802551 -77874997 - L1PB3 LINE L1 -1570 4584 4402 227 279 0 0 chr18 8852579 8852658 -77824890 - MSTD LTR MaLR -316 80 2 2189 109 7 0 chr18 8852688 8852981 -77824567 - AluSx SINE Alu -17 295 1 303 218 55 9 chr18 8852987 8853097 -77824451 + Charlie7 DNA MER1_type 2451 2565 -47 223 234 0 0 chr18 8855668 8855715 -77821833 - L2 LINE L2 -12 3260 3214 884 311 44 41 chr18 8856617 8857208 -77820340 + L1PA16 LINE L1 788 1380 -6194 241 323 0 10 chr18 8857342 8857441 -77820107 + L1PA16 LINE L1 2085 2182 -5399 13791 222 27 10 chr18 8857641 8861842 -77815706 + L1PA16 LINE L1 2182 6513 -1091 2063 118 3 10 chr18 8861842 8862138 -77815410 + AluSc SINE Alu 1 294 -15 13791 222 27 10 chr18 8862138 8863241 -77814307 + L1PA16 LINE L1 6513 7595 -9 608 197 117 0 chr18 8863579 8863716 -77813832 + MER63 DNA MER1_type 1 779 -57 578 314 57 18 chr18 8863850 8864079 -77813469 + MIR SINE MIR 15 252 -10 424 260 17 70 chr18 8864556 8864730 -77812818 - MIR SINE MIR -63 145 3 1711 108 0 37 chr18 8865459 8865727 -77811821 - AluSc SINE Alu -5 304 47 479 310 76 0 chr18 8865843 8866014 -77811534 - MIR SINE MIR -21 241 58 217 238 0 0 chr18 8866814 8866856 -77810692 + (CA)n Simple_repeat Simple_repeat 1 42 0 460 122 0 24 chr18 8867527 8867609 -77809939 + MADE1 DNA Mariner 1 80 0 247 222 19 0 chr18 8867650 8867704 -77809844 + (TG)n Simple_repeat Simple_repeat 2 56 0 243 267 155 37 chr18 8869569 8869730 -77807818 - L2 LINE L2 -12 3301 3122 2486 174 78 16 chr18 8869892 8870376 -77807172 - MLT2B1 LTR ERVL -3 517 4 1349 206 22 29 chr18 8870474 8870853 -77806695 + MER93b LTR ERV1 20 373 0 551 308 48 22 chr18 8871048 8871275 -77806273 - MIR SINE MIR -25 237 5 445 258 32 3 chr18 8872626 8872750 -77804798 - MER5B DNA MER1_type -6 172 51 2274 110 3 0 chr18 8872942 8873234 -77804314 - AluSx SINE Alu -19 293 1 797 229 10 34 chr18 8875630 8875835 -77801713 - LTR16C LTR ERVL -5 486 287 24 32 0 0 chr18 8876088 8876119 -77801429 + AT_rich Low_complexity Low_complexity 1 31 0 33993 43 3 2 chr18 8876119 8881070 -77796478 - L1PA5 LINE L1 -2 6152 1198 339 25 0 0 chr18 8881244 8881284 -77796264 + (TG)n Simple_repeat Simple_repeat 2 41 0 347 172 0 11 chr18 8883220 8883307 -77794241 + (TG)n Simple_repeat Simple_repeat 2 87 0 1388 148 13 4 chr18 8883925 8884161 -77793387 + L1MD2 LINE L1 6122 6359 0 189 0 0 0 chr18 8884773 8884794 -77792754 + (T)n Simple_repeat Simple_repeat 1 21 0 5615 105 57 0 chr18 8884929 8885731 -77791817 + L1PA13 LINE L1 5313 6160 -3 21 36 0 0 chr18 8886085 8886113 -77791435 + AT_rich Low_complexity Low_complexity 1 28 0 1585 147 65 49 chr18 8886464 8886771 -77790777 + AluJo SINE Alu 1 312 0 277 281 0 22 chr18 8887759 8887848 -77789700 - MLT1J2 LTR MaLR 0 450 364 1179 99 0 0 chr18 8888064 8888215 -77789333 - AluSx SINE Alu -134 178 28 1953 156 3 0 chr18 8888920 8889215 -77788333 + AluSx SINE Alu 1 296 -16 240 333 131 26 chr18 8891501 8891654 -77785894 - MIR SINE MIR -12 250 82 911 124 0 22 chr18 8891707 8891844 -77785704 + AluSq/x SINE Alu 1 134 -178 1016 146 13 6 chr18 8891944 8892102 -77785446 - AluSg/x SINE Alu -45 265 107 199 310 116 58 chr18 8892613 8892768 -77784780 - MIR SINE MIR -64 198 35 298 287 131 8 chr18 8894180 8894302 -77783246 - MLT1L LTR MaLR -2 613 477 1902 134 26 0 chr18 8895601 8895870 -77781678 + AluSq SINE Alu 1 276 -37 437 0 19 0 chr18 8895876 8895929 -77781619 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 2143 110 3 3 chr18 8896195 8896485 -77781063 - AluSq SINE Alu -23 290 1 200 86 29 0 chr18 8898433 8898468 -77779080 + (TC)n Simple_repeat Simple_repeat 2 37 0 284 207 50 121 chr18 8898734 8898874 -77778674 + MIR SINE MIR 44 173 -89 407 289 24 98 chr18 8898906 8899084 -77778464 - MIR SINE MIR -27 235 78 2155 121 3 0 chr18 8899084 8899381 -77778167 + AluSx SINE Alu 1 298 -14 407 289 24 98 chr18 8899381 8899448 -77778100 - MIR SINE MIR -184 78 8 295 218 153 89 chr18 8900578 8900702 -77776846 + Charlie7 DNA MER1_type 1 132 -2480 * 1108 157 135 15 chr18 8900670 8900937 -77776611 - LTR54B LTR ERV1 -5 493 195 412 121 76 0 chr18 8900911 8900977 -77776571 - LTR54B LTR ERV1 -405 93 23 * 1856 170 51 31 chr18 8900977 8901330 -77776218 - MSTC LTR MaLR 0 428 69 2301 68 9 40 chr18 8901491 8901813 -77775735 - AluSx SINE Alu 0 312 1 251 300 22 33 chr18 8902062 8902152 -77775396 + L3 LINE CR1 1482 1570 -7 21 82 0 0 chr18 8902856 8902905 -77774643 + AT_rich Low_complexity Low_complexity 1 49 0 22 88 0 0 chr18 8902970 8903027 -77774521 + AT_rich Low_complexity Low_complexity 1 57 0 234 156 0 0 chr18 8904421 8904466 -77773082 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 262 250 28 0 chr18 8904519 8904591 -77772957 + GA-rich Low_complexity Low_complexity 1 74 0 211 234 66 102 chr18 8904611 8904748 -77772800 - MIR SINE MIR -7 255 124 256 154 0 0 chr18 8904849 8904888 -77772660 + HsTC2 DNA Tc2 1860 1898 0 1589 253 92 20 chr18 8904913 8905470 -77772078 - MER20B DNA MER1_type -1 782 186 781 261 6 0 chr18 8905477 8905642 -77771906 + FRAM SINE Alu 1 166 -10 440 261 102 19 chr18 8905642 8905799 -77771749 - MER20B DNA MER1_type -613 170 1 180 0 0 0 chr18 8906942 8906962 -77770586 + (GA)n Simple_repeat Simple_repeat 2 21 0 2707 137 21 30 chr18 8907340 8907770 -77769778 + MSTB LTR MaLR 1 426 0 9067 156 39 53 chr18 8907770 8909444 -77768104 + MSTB-int LTR MaLR 1 1651 0 2304 173 60 2 chr18 8909448 8909847 -77767701 + MSTB LTR MaLR 5 426 0 2988 216 113 77 chr18 8910158 8910356 -77767192 + L1MC5 LINE L1 6552 6741 -1220 2274 104 3 7 chr18 8910356 8910664 -77766884 - AluSc SINE Alu -2 307 1 2988 216 113 77 chr18 8910664 8911769 -77765779 + L1MC5 LINE L1 6741 7910 -51 210 298 14 14 chr18 8912692 8912770 -77764778 + MIR SINE MIR 20 97 -111 842 160 15 0 chr18 8913005 8913136 -77764412 + AluJo SINE Alu 2 134 -178 185 136 0 45 chr18 8913589 8913633 -77763915 + (ATTG)n Simple_repeat Simple_repeat 3 44 0 788 245 155 0 chr18 8915216 8915461 -77762087 + MER46C DNA MER2_type 6 288 -50 535 355 37 5 chr18 8915535 8915724 -77761824 - MIR SINE MIR -46 216 22 30 0 0 0 chr18 8916051 8916081 -77761467 + AT_rich Low_complexity Low_complexity 1 30 0 2057 130 7 0 chr18 8917209 8917509 -77760039 - AluSx SINE Alu -10 302 1 26 0 0 0 chr18 8918750 8918776 -77758772 + AT_rich Low_complexity Low_complexity 1 26 0 261 118 0 0 chr18 8919185 8919201 -77758347 + (CA)n Simple_repeat Simple_repeat 1 67 0 261 118 0 0 chr18 8919201 8919252 -77758296 + (CA)n Simple_repeat Simple_repeat 1 51 0 1086 268 231 30 chr18 8919279 8919632 -77757916 + L2 LINE L2 2232 2513 -800 1785 151 6 35 chr18 8919632 8919950 -77757598 + AluJo SINE Alu 1 309 -3 1086 268 231 30 chr18 8919950 8920459 -77757089 + L2 LINE L2 2513 3259 -54 511 174 67 54 chr18 8920470 8920610 -77756938 - MER69 DNA AcHobo -1 2525 2381 937 149 11 63 chr18 8920610 8920784 -77756764 - FRAM SINE Alu 0 166 2 1316 126 0 0 chr18 8920805 8920987 -77756561 - AluSg/x SINE Alu -25 287 106 2023 221 35 10 chr18 8921014 8921240 -77756308 - MER69 DNA AcHobo -139 2387 2168 183 80 0 0 chr18 8921240 8921265 -77756283 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2023 221 35 10 chr18 8921265 8921549 -77755999 - MER69 DNA AcHobo -358 2168 1864 2860 266 67 9 chr18 8921553 8921872 -77755676 - MER69 DNA AcHobo -1704 822 523 2302 121 39 36 chr18 8921872 8922235 -77755313 - THE1B LTR MaLR 0 364 1 2860 266 67 9 chr18 8922235 8922692 -77754856 - MER69 DNA AcHobo -2003 523 1 255 324 0 0 chr18 8923029 8923097 -77754451 + MIR SINE MIR 74 141 -67 1017 173 0 12 chr18 8923137 8923299 -77754249 + FRAM SINE Alu 1 160 -6 267 279 0 15 chr18 8925411 8925479 -77752069 + MIR SINE MIR 172 238 -24 2249 107 0 0 chr18 8925904 8926202 -77751346 - AluSx SINE Alu -13 299 2 1250 217 41 29 chr18 8926202 8926543 -77751005 - LTR37A LTR ERV1 -4 422 78 317 229 140 0 chr18 8927110 8927219 -77750329 - MIR SINE MIR -62 146 58 237 262 82 16 chr18 8927751 8927812 -77749736 - L2 LINE L2 -1882 1432 1368 201 340 78 26 chr18 8928146 8928299 -77749249 + MER91A DNA MER1_type 1 161 -35 202 267 0 33 chr18 8928836 8928896 -77748652 + L2 LINE L2 3246 3303 -10 195 100 0 0 chr18 8928897 8928927 -77748621 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 2029 107 69 0 chr18 8929747 8930036 -77747512 + AluSc SINE Alu 1 309 0 1509 211 7 7 chr18 8930384 8930668 -77746880 + AluJo SINE Alu 4 287 -25 725 128 196 0 chr18 8931437 8931570 -77745978 - MSTA LTR MaLR -269 159 1 1290 172 27 148 chr18 8931624 8932037 -77745511 - MLT1A1 LTR MaLR 0 365 3 480 72 0 0 chr18 8932504 8932573 -77744975 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 464 255 107 20 chr18 8932668 8932817 -77744731 - MIR SINE MIR -87 175 14 695 260 54 37 chr18 8933048 8933290 -77744258 - MER45C DNA AcHobo 0 953 708 3119 167 23 21 chr18 8933457 8934027 -77743521 + L1MC1 LINE L1 5762 6332 -1 398 282 55 59 chr18 8934161 8934363 -77743185 + MIR SINE MIR 16 216 -46 28 71 0 0 chr18 8935156 8935212 -77742336 + AT_rich Low_complexity Low_complexity 1 56 0 2213 171 29 67 chr18 8935306 8935786 -77741762 + MLT1C LTR MaLR 1 462 -5 920 266 41 12 chr18 8937845 8938089 -77739459 + MIR SINE MIR 2 252 -10 658 201 58 75 chr18 8939178 8939201 -77738347 - L1MC5 LINE L1 -30 7931 7909 2140 117 0 0 chr18 8939201 8939492 -77738056 + AluSx SINE Alu 1 291 -21 658 201 58 75 chr18 8939492 8939761 -77737787 - L1MC5 LINE L1 -52 7909 7644 1358 113 39 13 chr18 8939764 8939995 -77737553 - Tigger7 DNA MER2_type -1 2490 2254 1736 133 0 0 chr18 8940020 8940288 -77737260 + AluSx SINE Alu 34 301 0 1413 215 97 82 chr18 8940301 8940457 -77737091 - L1MC5 LINE L1 -518 7443 7291 2945 91 8 8 chr18 8940457 8940832 -77736716 + THE1C LTR MaLR 1 375 0 1413 215 97 82 chr18 8940832 8941274 -77736274 - L1MC5 LINE L1 -670 7291 6836 27 29 0 0 chr18 8941480 8941514 -77736034 + AT_rich Low_complexity Low_complexity 1 34 0 945 238 33 46 chr18 8941636 8941939 -77735609 - L1ME1 LINE L1 -5 6161 5863 * 3366 218 37 89 chr18 8941936 8942435 -77735113 - L1ME1 LINE L1 -1414 4732 4208 1114 180 46 0 chr18 8942435 8942652 -77734896 - L1MA4 LINE L1 -3 6297 6071 3366 218 37 89 chr18 8942652 8942969 -77734579 - L1ME1 LINE L1 -1938 4208 4002 2212 138 0 0 chr18 8942969 8943281 -77734267 + AluSx SINE Alu 1 312 0 3366 218 37 89 chr18 8943281 8943718 -77733830 - L1ME1 LINE L1 -2144 4002 3544 5160 120 13 8 chr18 8943728 8944496 -77733052 + L1P LINE L1 11 782 -5364 439 229 48 0 chr18 8944667 8944772 -77732776 + MIR SINE MIR 20 129 -133 334 254 27 129 chr18 8944892 8945116 -77732432 - L2 LINE L2 -94 3178 2978 2245 130 0 0 chr18 8945653 8945953 -77731595 + AluSx SINE Alu 1 300 -12 2189 100 24 0 chr18 8946838 8947128 -77730420 + AluSg SINE Alu 1 297 -13 1910 129 0 14 chr18 8948948 8949235 -77728313 + AluSx SINE Alu 1 283 -29 347 285 23 47 chr18 8949251 8949271 -77728277 - HAL1b LINE L1 -37 1311 1292 332 284 49 95 chr18 8949271 8949573 -77727975 - L1ME4a LINE L1 -73 6048 5734 743 206 0 8 chr18 8949573 8949704 -77727844 - FLAM_A SINE Alu -3 130 1 332 284 49 95 chr18 8949704 8949789 -77727759 - L1ME4a LINE L1 -387 5734 1144 537 138 0 0 chr18 8949999 8950079 -77727469 + MADE1 DNA Mariner 1 80 0 29 0 0 0 chr18 8950097 8950126 -77727422 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr18 8950450 8950474 -77727074 + AT_rich Low_complexity Low_complexity 1 24 0 261 0 0 0 chr18 8950811 8950840 -77726708 + (TGAG)n Simple_repeat Simple_repeat 4 32 0 2227 98 3 26 chr18 8951424 8951731 -77725817 + AluSx SINE Alu 5 304 -8 245 290 180 0 chr18 8951732 8951832 -77725716 - MIR SINE MIR -139 123 6 1944 274 91 29 chr18 8952432 8953161 -77724387 - HERV16 LTR ERVL -2590 2406 1633 1967 294 52 27 chr18 8953374 8954256 -77723292 - HERV16 LTR ERVL -3711 1285 317 2186 203 90 13 chr18 8954256 8954724 -77722824 + MLT1D LTR MaLR 1 504 -1 1967 294 52 27 chr18 8954724 8954928 -77722620 - HERV16 LTR ERVL -4679 317 119 932 280 52 42 chr18 8955026 8955313 -77722235 - LTR16A LTR ERVL 0 450 156 2075 180 31 6 chr18 8955313 8955669 -77721879 - MLT1A1 LTR MaLR 0 365 1 932 280 52 42 chr18 8955669 8955806 -77721742 - LTR16A LTR ERVL -294 156 22 181 204 28 28 chr18 8956132 8956274 -77721274 + (TG)n Simple_repeat Simple_repeat 1 142 0 432 0 0 0 chr18 8956754 8956802 -77720746 + (CA)n Simple_repeat Simple_repeat 1 48 0 227 224 17 0 chr18 8957415 8957473 -77720075 + L1ME4a LINE L1 5997 6055 -66 2227 161 54 7 chr18 8957479 8957884 -77719664 - MSTB1 LTR MaLR 0 432 9 625 236 73 47 chr18 8957895 8958196 -77719352 - L1ME4a LINE L1 0 6121 5813 255 258 79 0 chr18 8958236 8958325 -77719223 - L1ME4a LINE L1 -382 5739 5644 324 113 0 32 chr18 8959232 8959294 -77718254 + AluSp/q SINE Alu 244 303 0 1685 197 3 0 chr18 8959300 8959590 -77717958 - 7SLRNA srpRNA srpRNA -29 291 1 1954 280 121 11 chr18 8959681 8960409 -77717139 + L2 LINE L2 1567 2374 -940 229 280 0 80 chr18 8960897 8960972 -77716576 + L2 LINE L2 2644 2712 -602 2177 119 0 0 chr18 8960976 8961269 -77716279 + AluSx SINE Alu 1 293 -19 197 312 26 39 chr18 8961606 8961683 -77715865 - MIR SINE MIR -94 114 39 410 240 236 29 chr18 8961997 8962205 -77715343 - MIR SINE MIR -5 257 7 508 214 23 30 chr18 8963129 8963260 -77714288 + Tigger5 DNA MER2_type 1 130 -2193 394 227 0 0 chr18 8963243 8963318 -77714230 + Tigger5 DNA MER2_type 2249 2323 0 * 901 159 267 19 chr18 8965414 8965526 -77712022 - Charlie1b DNA MER1_type -2266 495 412 2046 88 44 4 chr18 8965526 8965849 -77711699 - AluSq SINE Alu 0 334 1 901 159 267 19 chr18 8965849 8965993 -77711555 - Charlie1b DNA MER1_type -2349 412 174 650 229 64 0 chr18 8965960 8966117 -77711431 - Charlie1b DNA MER1_type -313 210 44 * 222 277 15 0 chr18 8966479 8966544 -77711004 + L2 LINE L2 2033 2098 -1216 1046 302 114 55 chr18 8966691 8967407 -77710141 + L2 LINE L2 2107 2865 -449 968 299 138 37 chr18 8967432 8967846 -77709702 - L2 LINE L2 -1 3312 2941 2420 146 39 99 chr18 8967846 8968382 -77709166 - MLT1D LTR MaLR -1 504 1 968 299 138 37 chr18 8968382 8968919 -77708629 - L2 LINE L2 -372 2941 2266 2265 175 43 17 chr18 8969064 8969316 -77708232 + L1MC/D LINE L1 4910 5154 -1179 2099 124 0 3 chr18 8969316 8969598 -77707950 + AluSx SINE Alu 1 281 -31 339 65 0 0 chr18 8969598 8969644 -77707904 + (GAATG)n Simple_repeat Simple_repeat 2 47 0 2265 175 43 17 chr18 8969644 8970139 -77707409 + L1MC/D LINE L1 5153 5673 -660 4417 151 4 24 chr18 8970240 8970939 -77706609 - L1MA8 LINE L1 -180 6111 5400 2093 110 3 36 chr18 8970939 8971247 -77706301 - AluSc SINE Alu -11 298 1 4417 151 4 24 chr18 8971247 8972082 -77705466 - L1MA8 LINE L1 -891 5400 4612 356 58 19 0 chr18 8972078 8972130 -77705418 - L1MA8 LINE L1 -1833 4313 4261 * 443 315 122 14 chr18 8972171 8972384 -77705164 + MIR SINE MIR 20 255 -7 365 230 67 52 chr18 8972495 8972630 -77704918 + LTR48 LTR ERV1 323 459 -328 271 79 0 0 chr18 8972718 8972756 -77704792 + LTR48 LTR ERV1 613 650 -137 2209 107 3 0 chr18 8972883 8973181 -77704367 - AluSp SINE Alu -14 299 1 329 270 224 35 chr18 8973616 8973790 -77703758 - L2 LINE L2 -244 3069 2863 2729 165 102 17 chr18 8974411 8974998 -77702550 - L1MB5 LINE L1 -87 6087 5451 588 226 105 32 chr18 8975023 8975213 -77702335 + MER112 DNA MER1_type 44 247 -13 2005 124 0 7 chr18 8975607 8975911 -77701637 + AluSq SINE Alu 3 304 0 866 264 7 74 chr18 8975996 8976265 -77701283 - MIR SINE MIR -9 253 3 948 158 16 26 chr18 8976969 8977288 -77700260 + MLT1A1 LTR MaLR 8 365 0 322 299 76 22 chr18 8977389 8977573 -77699975 - MER117 DNA MER1_type -2 195 2 356 230 20 56 chr18 8977760 8977970 -77699578 + L1MDb LINE L1 1465 1728 -4916 305 247 39 0 chr18 8978042 8978119 -77699429 + L1MDb LINE L1 1775 1854 -4790 539 253 152 55 chr18 8978275 8978638 -77698910 + MLT1J2 LTR MaLR 36 433 -17 1198 134 17 0 chr18 8978638 8978817 -77698731 - AluSg/x SINE Alu -11 301 120 646 239 34 76 chr18 8978947 8979136 -77698412 - L1M4 LINE L1 -2613 3533 3366 2079 136 24 0 chr18 8979136 8979431 -77698117 - AluSq SINE Alu -11 302 1 646 239 34 76 chr18 8979431 8979621 -77697927 - L1M4 LINE L1 -2780 3366 3170 552 215 31 23 chr18 8979622 8979752 -77697796 - FLAM_C SINE Alu -12 131 1 1439 343 84 5 chr18 8979761 8980429 -77697119 - L1M4 LINE L1 -2982 3164 2444 324 197 41 8 chr18 8980457 8980579 -77696969 + (TA)n Simple_repeat Simple_repeat 1 126 0 234 91 0 0 chr18 8980584 8980617 -77696931 + (TG)n Simple_repeat Simple_repeat 2 34 0 701 191 0 0 chr18 8980663 8980778 -77696770 - FLAM_A SINE Alu -18 115 1 308 188 55 8 chr18 8981002 8981130 -77696418 + (TA)n Simple_repeat Simple_repeat 2 135 0 342 183 67 6 chr18 8981168 8981332 -77696216 + (TA)n Simple_repeat Simple_repeat 1 174 0 2206 156 33 35 chr18 8982300 8982723 -77694825 - MSTB LTR MaLR -4 422 1 187 267 11 100 chr18 8983315 8983405 -77694143 - MIR3 SINE MIR -32 176 95 351 65 0 0 chr18 8983444 8983490 -77694058 + (CA)n Simple_repeat Simple_repeat 2 47 0 220 276 40 0 chr18 8983540 8983616 -77693932 + GA-rich Low_complexity Low_complexity 4 82 0 398 318 58 31 chr18 8983671 8983894 -77693654 + MIR SINE MIR 1 229 -33 382 304 111 0 chr18 8984018 8984153 -77693395 + L2 LINE L2 3123 3272 0 183 314 28 103 chr18 8984308 8984560 -77692988 + L2 LINE L2 2914 3146 -126 2813 93 3 3 chr18 8985104 8985479 -77692069 - THE1C LTR MaLR 0 375 1 438 304 56 19 chr18 8986434 8986595 -77690953 - MIR SINE MIR -71 191 25 1595 103 5 0 chr18 8986730 8986943 -77690605 + AluSg/x SINE Alu 80 293 -17 239 326 111 7 chr18 8987078 8987213 -77690335 + L2 LINE L2 2596 2744 -570 190 300 29 14 chr18 8988220 8988290 -77689258 + MIR3 SINE MIR 127 197 -11 214 277 0 0 chr18 8988371 8988418 -77689130 - MIR SINE MIR -83 125 79 204 259 37 0 chr18 8988926 8988980 -77688568 + CT-rich Low_complexity Low_complexity 5 60 0 632 177 69 15 chr18 8989526 8989656 -77687892 + FLAM_C SINE Alu 6 142 -1 2356 115 0 0 chr18 8992540 8992852 -77684696 + AluSx SINE Alu 1 312 0 420 257 22 29 chr18 8993116 8993252 -77684296 - MLT1J LTR MaLR -351 160 26 1756 246 113 43 chr18 8993591 8994319 -77683229 + L1ME1 LINE L1 5383 6161 -5 1773 187 12 52 chr18 8994524 8994930 -77682618 + MLT1B LTR MaLR 1 390 0 311 266 11 0 chr18 8995495 8995589 -77681959 - MER103 DNA DNA -8 158 64 1700 161 4 4 chr18 8996214 8996481 -77681067 - AluJb SINE Alu -41 271 5 1608 215 0 6 chr18 8997615 8997927 -77679621 + AluSx SINE Alu 1 310 -2 903 298 92 44 chr18 9000118 9000760 -77676788 - L2 LINE L2 0 3313 2618 2135 117 3 0 chr18 9000760 9001059 -77676489 + AluSg SINE Alu 1 300 -10 903 298 92 44 chr18 9001059 9001147 -77676401 - L2 LINE L2 -695 2618 2536 409 262 59 15 chr18 9001597 9001799 -77675749 + HAL1 LINE L1 1448 1658 -849 1319 211 100 33 chr18 9001837 9002258 -77675290 - LTR40a LTR ERVL 0 519 71 989 298 81 41 chr18 9002670 9003576 -77673972 + L1MEc LINE L1 35 976 -5420 180 250 77 58 chr18 9003929 9003981 -77673567 + MIR SINE MIR 2 54 -208 814 79 0 0 chr18 9004081 9004182 -77673366 - AluSg SINE Alu -209 101 1 485 253 3 2 chr18 9004277 9004444 -77673104 + L1MC/D LINE L1 5266 5430 -2378 35 24 0 0 chr18 9004506 9004548 -77673000 + AT_rich Low_complexity Low_complexity 1 42 0 896 146 0 0 chr18 9005707 9005837 -77671711 + FLAM_A SINE Alu 1 130 -3 423 130 0 0 chr18 9006009 9006086 -77671462 + (TC)n Simple_repeat Simple_repeat 2 78 0 234 0 0 0 chr18 9006086 9006112 -77671436 + (CA)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr18 9006553 9006583 -77670965 + AT_rich Low_complexity Low_complexity 1 30 0 189 196 0 0 chr18 9007223 9007274 -77670274 + T-rich Low_complexity Low_complexity 1 51 0 32 0 0 0 chr18 9007335 9007367 -77670181 + AT_rich Low_complexity Low_complexity 1 32 0 210 37 0 0 chr18 9008626 9008653 -77668895 + (CAAAC)n Simple_repeat Simple_repeat 2 28 0 1447 204 12 20 chr18 9009030 9009374 -77668174 + L1PA16 LINE L1 5809 6149 -17 2166 88 7 11 chr18 9010630 9010957 -77666591 + AluSp SINE Alu 1 326 0 485 278 69 35 chr18 9011828 9012001 -77665547 + MIR SINE MIR 84 262 0 1959 161 7 3 chr18 9012439 9012737 -77664811 - AluJo SINE Alu -13 299 1 2353 91 17 0 chr18 9013182 9013478 -77664070 + AluSq SINE Alu 1 301 -12 2095 123 0 3 chr18 9014775 9015068 -77662480 - AluSx SINE Alu -20 292 1 1129 253 40 16 chr18 9015122 9015502 -77662046 - LTR40b LTR ERVL -38 424 36 447 339 36 21 chr18 9016351 9016543 -77661005 - MIR SINE MIR -60 202 8 776 248 37 53 chr18 9017749 9017995 -77659553 - MIR SINE MIR -13 249 8 186 316 0 0 chr18 9018144 9018201 -77659347 + L2 LINE L2 2262 2318 -996 4077 170 70 11 chr18 9018262 9019173 -77658375 + L1P LINE L1 4357 5321 -825 285 241 0 120 chr18 9219299 9219345 -77458203 - MIR SINE MIR -62 200 172 1969 120 29 0 chr18 9219345 9219646 -77457902 - AluSx SINE Alu 0 309 1 285 241 0 120 chr18 9219646 9219706 -77457842 - MIR SINE MIR -90 172 106 282 289 0 50 chr18 9219848 9219969 -77457579 + L2 LINE L2 3172 3286 -27 275 224 30 15 chr18 9220552 9220619 -77456929 + Tigger7 DNA MER2_type 200 267 -466 * 458 198 10 0 chr18 9220617 9220713 -77456835 + Tigger7 DNA MER2_type 2389 2485 -2 3651 233 67 19 chr18 9221303 9222650 -77454898 - L1MEc LINE L1 -2379 3836 2426 640 341 38 22 chr18 9222650 9223101 -77454447 + LTR16B LTR ERVL 1 458 -6 2809 276 102 32 chr18 9223108 9225288 -77452260 - L1MEc LINE L1 -3786 2458 42 754 275 36 5 chr18 9225731 9225953 -77451595 - MIR SINE MIR -13 249 21 1857 164 0 25 chr18 9227291 9227608 -77449940 - AluJo SINE Alu -3 309 1 804 108 122 0 chr18 9228148 9228296 -77449252 + L1MA4A LINE L1 6133 6298 -5 2004 150 5 40 chr18 9228656 9228985 -77448563 + MER47A DNA MER2_type 1 317 -2006 2256 78 0 20 chr18 9228985 9229278 -77448270 - AluSq SINE Alu 0 313 27 2004 150 5 40 chr18 9229278 9229327 -77448221 + MER47A DNA MER2_type 317 366 0 385 323 24 30 chr18 9229412 9229579 -77447969 - L2 LINE L2 0 3313 3148 367 291 19 39 chr18 9229712 9229903 -77447645 - MIR SINE MIR -56 206 17 466 92 92 69 chr18 9232775 9232862 -77444686 - AluJ/FLAM SINE Alu -223 89 1 236 320 13 13 chr18 9233021 9233099 -77444449 - MIR SINE MIR -184 78 1 294 356 114 31 chr18 9233183 9233666 -77443882 - L2 LINE L2 -454 2860 2338 1720 180 0 7 chr18 9233706 9233990 -77443558 + AluJo SINE Alu 1 282 -30 408 40 0 0 chr18 9233990 9234040 -77443508 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 439 290 71 24 chr18 9234759 9234928 -77442620 + MIR SINE MIR 9 185 -77 1129 218 70 33 chr18 9236495 9236826 -77440722 - MER2 DNA MER2_type -1 343 1 2334 82 0 13 chr18 9236872 9237177 -77440371 + AluSq SINE Alu 1 301 -12 28 68 0 14 chr18 9238677 9238697 -77438851 + AT_rich Low_complexity Low_complexity 1 20 -53 1586 129 25 107 chr18 9238697 9239015 -77438533 - AluYb8 SINE Alu -26 292 1 28 68 0 14 chr18 9239015 9239068 -77438480 + AT_rich Low_complexity Low_complexity 20 73 0 2460 74 3 0 chr18 9239569 9239866 -77437682 - AluSp SINE Alu -15 298 1 777 241 91 62 chr18 9239963 9240369 -77437179 + LTR33 LTR ERVL 93 510 -11 448 268 174 7 chr18 9240486 9240624 -77436924 + MER5A DNA MER1_type 29 189 0 278 350 83 6 chr18 9240792 9240949 -77436599 - L2 LINE L2 -2 3270 3102 465 231 108 20 chr18 9242088 9242291 -77435257 - MER112 DNA MER1_type -38 222 2 485 329 32 7 chr18 9243553 9243708 -77433840 - MIR3 SINE MIR -30 178 20 513 16 31 0 chr18 9244116 9244180 -77433368 - L1PA7 LINE L1 -287 5867 5802 500 201 52 60 chr18 9244180 9244314 -77433234 - MLT1C LTR MaLR -334 133 1 1419 187 119 42 chr18 9244314 9244907 -77432641 - L1ME LINE L1 -359 5805 5173 255 148 19 0 chr18 9244924 9244978 -77432570 - L1ME LINE L1 -1785 4361 4307 717 0 0 0 chr18 9244996 9245084 -77432464 - L1HS LINE L1 0 6155 6068 * 1049 232 79 16 chr18 9245083 9245462 -77432086 - L1ME LINE L1 -1829 4317 3915 545 196 102 5 chr18 9245503 9245874 -77431674 - L1ME LINE L1 -3018 3128 2686 25 0 0 0 chr18 9246485 9246510 -77431038 + AT_rich Low_complexity Low_complexity 1 25 0 2474 72 0 3 chr18 9246669 9246975 -77430573 + AluSq SINE Alu 1 305 -8 213 255 0 20 chr18 9247246 9247297 -77430251 - MER5B DNA MER1_type -40 138 89 2358 109 33 18 chr18 9247772 9248167 -77429381 + MSTA LTR MaLR 1 401 -27 2376 92 0 13 chr18 9248182 9248497 -77429051 - AluY SINE Alu 0 311 1 315 360 83 36 chr18 9248527 9248805 -77428743 - L2 LINE L2 -38 3234 2944 2119 119 0 10 chr18 9249022 9249315 -77428233 + AluSx SINE Alu 1 290 -22 374 296 117 41 chr18 9249412 9249548 -77428000 - L1ME4a LINE L1 -222 5968 5844 2117 115 0 34 chr18 9249548 9249871 -77427677 - AluSx SINE Alu 0 312 1 374 296 117 41 chr18 9249871 9250051 -77427497 - L1ME4a LINE L1 -346 5844 5628 430 357 84 34 chr18 9250150 9250615 -77426933 - L2 LINE L2 -845 2469 1982 1063 206 129 34 chr18 9250665 9250762 -77426786 - MER20B DNA MER1_type -59 724 638 3096 81 30 7 chr18 9250762 9251196 -77426352 - MLT2A1 LTR ERVL 0 444 1 1063 206 129 34 chr18 9251196 9251486 -77426062 - MER20B DNA MER1_type -145 638 300 210 37 0 0 chr18 9251573 9251600 -77425948 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1546 105 29 0 chr18 9251617 9251827 -77425721 - AluSq SINE Alu -95 218 3 473 286 24 15 chr18 9251854 9252060 -77425488 + L1ME1 LINE L1 5954 6161 -5 698 264 95 22 chr18 9252071 9252344 -77425204 - MER20B DNA MER1_type -469 314 22 2018 138 3 3 chr18 9254421 9254717 -77422831 - AluJb SINE Alu -16 296 1 588 269 46 15 chr18 9255212 9255409 -77422139 - MER58A DNA MER1_type 0 224 22 226 295 0 0 chr18 9255958 9256019 -77421529 + (CATA)n Simple_repeat Simple_repeat 3 63 0 25 51 0 0 chr18 9256580 9256619 -77420929 + AT_rich Low_complexity Low_complexity 1 39 0 2246 105 0 0 chr18 9257399 9257694 -77419854 - AluSg SINE Alu -15 295 1 272 138 69 0 chr18 9257820 9257878 -77419670 + L1M4 LINE L1 4887 4948 -1198 2227 94 0 3 chr18 9257941 9258229 -77419319 - AluSq SINE Alu -26 287 1 1413 154 75 4 chr18 9258303 9258570 -77418978 + L1PB2 LINE L1 5865 6150 -1 7683 229 60 53 chr18 9258895 9258951 -77418597 - L1MEc LINE L1 -787 5428 5374 7066 52 7 0 chr18 9258951 9260603 -77416945 + L1PA7 LINE L1 4471 6150 -4 7683 229 60 53 chr18 9260603 9261371 -77416177 - L1MEc LINE L1 -841 5374 4613 3361 151 25 62 chr18 9261371 9262072 -77415476 - L1MA4 LINE L1 -12 6288 5617 2288 129 0 3 chr18 9262072 9262383 -77415165 - AluSx SINE Alu -2 310 1 3361 151 25 62 chr18 9262383 9262452 -77415096 - L1MA4 LINE L1 -683 5617 5547 7683 229 60 53 chr18 9262452 9263506 -77414042 - L1MEc LINE L1 -1602 4613 3567 2451 81 0 3 chr18 9263506 9263815 -77413733 - AluY SINE Alu -3 308 1 7683 229 60 53 chr18 9263815 9264739 -77412809 - L1MEc LINE L1 -2648 3567 2651 602 208 0 69 chr18 9264739 9264869 -77412679 - FLAM_A SINE Alu -12 121 1 7683 229 60 53 chr18 9264869 9265216 -77412332 - L1MEc LINE L1 -3564 2651 2308 2519 75 3 0 chr18 9265216 9265521 -77412027 - AluSq SINE Alu -7 306 1 7683 229 60 53 chr18 9265521 9265615 -77411933 - L1MEc LINE L1 -3907 2308 2198 2007 111 6 44 chr18 9265615 9265930 -77411618 - AluSx SINE Alu -9 303 1 7683 229 60 53 chr18 9265930 9265987 -77411561 - L1MEc LINE L1 -4017 2198 2143 354 207 25 16 chr18 9266080 9266201 -77411347 + L1MEc LINE L1 1051 1172 -5224 21 36 0 0 chr18 9266250 9266278 -77411270 + AT_rich Low_complexity Low_complexity 1 28 0 1000 279 112 26 chr18 9266281 9266890 -77410658 - L1MEc LINE L1 -4410 1986 1326 2941 244 55 22 chr18 9266942 9267849 -77409699 - L1MEc LINE L1 -5420 976 40 745 299 67 85 chr18 9267938 9269032 -77408516 - L1MEc LINE L1 -5286 1110 37 378 233 34 125 chr18 9269071 9269132 -77408416 + L2 LINE L2 3150 3215 -98 2242 111 73 66 chr18 9269132 9269557 -77407991 - MSTA LTR MaLR 0 428 1 378 233 34 125 chr18 9269557 9269671 -77407877 + L2 LINE L2 3215 3309 -4 22 0 0 0 chr18 9269894 9269916 -77407632 + AT_rich Low_complexity Low_complexity 1 22 0 182 354 101 32 chr18 9269983 9270141 -77407407 - L2 LINE L2 -252 3061 2893 564 185 0 96 chr18 9270196 9270331 -77407217 - FLAM_C SINE Alu -8 135 14 367 313 0 97 chr18 9270608 9270784 -77406764 + MER5A DNA MER1_type 3 161 -28 208 186 23 0 chr18 9270816 9270859 -77406689 - L2 LINE L2 -1312 2002 1959 23 33 0 0 chr18 9273982 9274012 -77403536 + AT_rich Low_complexity Low_complexity 1 30 0 676 199 123 0 chr18 9274032 9274196 -77403352 - L1ME1 LINE L1 -1 6165 5989 466 187 22 0 chr18 9274288 9274379 -77403169 - Tigger1 DNA MER2_type 0 2418 2326 2011 142 14 7 chr18 9275383 9275678 -77401870 + AluJo SINE Alu 1 297 -15 1589 113 0 23 chr18 9275676 9275933 -77401615 + AluSg/x SINE Alu 68 319 0 * 448 297 102 37 chr18 9276082 9276456 -77401092 - MLT1J LTR MaLR -2 509 112 626 264 164 0 chr18 9276643 9276844 -77400704 - MIR SINE MIR -24 238 5 445 335 122 45 chr18 9276993 9277517 -77400031 - L2 LINE L2 -2 3311 2747 22 35 0 0 chr18 9277911 9277940 -77399608 + AT_rich Low_complexity Low_complexity 1 29 0 996 284 92 46 chr18 9278430 9279842 -77397706 + L1MCc LINE L1 1167 2862 -4260 1587 139 86 83 chr18 9281760 9282192 -77395356 - L1MB3 LINE L1 -158 6025 5593 836 152 22 7 chr18 9282322 9282460 -77395088 - AluSg/x SINE Alu -8 304 165 474 152 9 67 chr18 9282560 9282665 -77394883 - L1MB3 LINE L1 -624 5547 5449 2241 98 0 29 chr18 9282848 9283163 -77394385 + AluSg SINE Alu 1 306 -4 223 182 0 0 chr18 9283248 9283292 -77394256 + (TTTAA)n Simple_repeat Simple_repeat 3 46 0 5135 120 0 0 chr18 9284075 9285072 -77392476 - L1PA16 LINE L1 -5 6161 5152 751 144 8 0 chr18 9285087 9285219 -77392329 + MER63 DNA MER1_type 923 1055 -5 6451 63 31 36 chr18 9285279 9286999 -77390549 - SVA Other Other -628 1386 1 1308 203 7 0 chr18 9287006 9287292 -77390256 - L1PA16 LINE L1 -982 5164 4877 914 257 19 0 chr18 9287857 9288114 -77389434 - L1MC4a LINE L1 -1208 6600 6339 594 212 22 7 chr18 9288122 9288259 -77389289 - L1ME2 LINE L1 -37 6127 5989 256 186 139 12 chr18 9288320 9288406 -77389142 - L1ME2 LINE L1 -462 5897 5801 1157 225 93 15 chr18 9288407 9288741 -77388807 - MLT1C LTR MaLR 0 467 108 630 185 3 0 chr18 9288751 9288896 -77388652 - L1MA3 LINE L1 -120 6182 6041 553 180 10 10 chr18 9290257 9290357 -77387191 + L1MC1 LINE L1 6223 6322 -11 1079 226 0 0 chr18 9290360 9290572 -77386976 + AluJo SINE Alu 88 299 -13 25 31 0 0 chr18 9290572 9290604 -77386944 + AT_rich Low_complexity Low_complexity 1 32 0 2197 100 0 0 chr18 9290894 9291205 -77386343 + AluSg SINE Alu 1 311 0 1842 80 8 8 chr18 9291234 9291471 -77386077 + AluSq SINE Alu 62 298 -15 29 84 0 0 chr18 9291524 9291595 -77385953 + AT_rich Low_complexity Low_complexity 1 71 0 241 239 8 123 chr18 9291743 9291986 -77385562 + L1ME2 LINE L1 3742 3956 -2190 293 267 42 42 chr18 9292380 9292571 -77384977 + L1ME2 LINE L1 4431 4621 -1525 206 301 36 36 chr18 9294021 9294104 -77383444 + L2 LINE L2 3229 3311 -2 257 367 58 0 chr18 9294448 9294568 -77382980 - L2 LINE L2 -601 2713 2587 180 0 0 0 chr18 9296810 9296830 -77380718 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1972 120 67 0 chr18 9297083 9297366 -77380182 + AluSp SINE Alu 1 302 -11 1152 207 98 42 chr18 9298797 9299227 -77378321 + L1ME2 LINE L1 5645 6098 -66 1102 155 0 0 chr18 9299233 9299401 -77378147 + FRAM SINE Alu 1 167 -9 6855 157 147 35 chr18 9299756 9301321 -77376227 - MER52A LTR ERV1 -2 1753 14 377 272 107 92 chr18 9301328 9301600 -77375948 + HAL1 LINE L1 1189 1464 -1043 2592 129 16 14 chr18 9301797 9301868 -77375680 + LTR45B LTR ERV1 3 72 -417 3697 104 71 14 chr18 9301868 9302133 -77375415 - MER4B LTR ERV1 0 610 362 2294 107 0 7 chr18 9302133 9302433 -77375115 + AluSq SINE Alu 1 298 -15 3697 104 71 14 chr18 9302433 9302744 -77374804 - MER4B LTR ERV1 -248 362 1 2592 129 16 14 chr18 9302744 9303113 -77374435 + LTR45B LTR ERV1 72 444 -45 890 229 73 33 chr18 9303831 9304592 -77372956 - L1ME3A LINE L1 -11 6159 5373 351 324 92 17 chr18 9305571 9305809 -77371739 + HAL1 LINE L1 851 1106 -1401 246 316 63 40 chr18 9305952 9306303 -77371245 + HAL1 LINE L1 1244 1602 -905 1787 172 16 26 chr18 9306632 9306940 -77370608 - AluJo SINE Alu -7 305 1 235 293 89 41 chr18 9307373 9307496 -77370052 + L2 LINE L2 3167 3295 -18 2062 203 62 0 chr18 9307692 9308156 -77369392 + MER68 LTR ERV1 70 562 0 198 0 0 0 chr18 9308248 9308270 -77369278 + (CA)n Simple_repeat Simple_repeat 2 23 0 2307 191 77 2 chr18 9308633 9309116 -77368432 + LTR53 LTR ERVL 1 519 0 197 108 27 0 chr18 9309590 9309627 -77367921 + (CAT)n Simple_repeat Simple_repeat 1 38 0 2839 72 20 8 chr18 9310099 9310489 -77367059 + L1PA11 LINE L1 5778 6172 -2 1493 192 69 0 chr18 9310541 9310817 -77366731 + AluJo SINE Alu 3 297 -15 204 244 0 0 chr18 9311435 9311476 -77366072 - L2 LINE L2 -22 3250 3210 249 236 56 0 chr18 9311606 9311695 -77365853 + MLT1J LTR MaLR 399 492 -19 206 244 0 0 chr18 9312743 9312784 -77364764 - L2 LINE L2 -22 3250 3210 30 27 0 0 chr18 9312896 9312933 -77364615 + AT_rich Low_complexity Low_complexity 1 37 0 248 189 81 0 chr18 9312933 9313007 -77364541 - LTR37B LTR ERV1 0 468 389 414 90 0 0 chr18 9313012 9313079 -77364469 - L1MA3 LINE L1 0 6305 6239 381 264 54 85 chr18 9313215 9313510 -77364038 + HAL1 LINE L1 798 1083 -1424 1626 158 9 73 chr18 9313518 9313834 -77363714 - AluJo SINE Alu -16 296 1 390 284 104 52 chr18 9313889 9314294 -77363254 + HAL1 LINE L1 1167 1592 -915 614 28 64 0 chr18 9314677 9314786 -77362762 + GA-rich Low_complexity Low_complexity 1 116 0 2448 53 0 13 chr18 9316304 9316608 -77360940 + AluY SINE Alu 1 300 -11 748 239 56 0 chr18 9317202 9317399 -77360149 - MER3 DNA MER1_type 0 209 2 214 231 88 55 chr18 9319087 9319178 -77358370 + MIR SINE MIR 51 144 -118 3046 177 43 8 chr18 9319178 9320011 -77357537 - MER54A LTR ERVL 0 901 1 34 42 0 0 chr18 9320612 9320660 -77356888 + AT_rich Low_complexity Low_complexity 1 48 0 931 340 24 15 chr18 9320864 9321331 -77356217 + L2 LINE L2 2235 2705 -609 405 310 114 39 chr18 9321365 9321778 -77355770 + L2 LINE L2 2824 3267 -46 308 233 64 134 chr18 9321783 9321955 -77355593 - L1ME LINE L1 -5475 595 436 398 155 146 0 chr18 9321974 9322077 -77355471 + L1MC4 LINE L1 6962 7079 -963 1335 208 58 45 chr18 9322078 9322458 -77355090 + L1MC4 LINE L1 7245 7629 -413 335 271 108 88 chr18 9322635 9322886 -77354662 + L1MC4 LINE L1 7636 7891 -151 227 224 0 0 chr18 9322903 9322952 -77354596 + L1MC4 LINE L1 7994 8042 0 411 301 37 37 chr18 9322974 9323246 -77354302 + L1MEc LINE L1 1867 2138 -4258 1154 222 28 34 chr18 9323254 9323610 -77353938 + L1MEc LINE L1 2329 2682 -3533 1054 200 136 12 chr18 9323739 9324196 -77353352 - L1MCa LINE L1 -4311 2115 1502 461 340 46 78 chr18 9324702 9325114 -77352434 - L2 LINE L2 -26 3246 2848 7245 220 47 4 chr18 9325164 9325501 -77352047 - L1 LINE L1 -922 5224 4903 324 70 0 0 chr18 9325501 9325544 -77352004 + (CA)n Simple_repeat Simple_repeat 2 44 0 7245 220 47 4 chr18 9325544 9326904 -77350644 - L1 LINE L1 -1243 4903 3455 2580 182 30 45 chr18 9327011 9327214 -77350334 - L1M4c LINE L1 -3884 2762 2558 189 0 0 0 chr18 9327214 9327235 -77350313 + (CTTG)n Simple_repeat Simple_repeat 4 24 0 845 172 0 0 chr18 9327236 9327358 -77350190 - FLAM_A SINE Alu -11 122 1 2580 182 30 45 chr18 9327358 9327693 -77349855 - L1M4c LINE L1 -4088 2558 2220 2250 173 85 0 chr18 9327693 9328091 -77349457 + MSTB1 LTR MaLR 1 432 0 2580 182 30 45 chr18 9328091 9328614 -77348934 - L1M4c LINE L1 -4426 2220 1621 2273 119 0 0 chr18 9328893 9329188 -77348360 - AluSx SINE Alu -15 297 3 248 146 0 0 chr18 9329224 9329265 -77348283 - Alu SINE Alu -14 288 248 265 256 45 51 chr18 9329274 9329370 -77348178 - L1M4c LINE L1 -6383 159 63 192 77 0 0 chr18 9329370 9329396 -77348152 + (TG)n Simple_repeat Simple_repeat 2 27 0 265 256 45 51 chr18 9329396 9329455 -77348093 - L1M4c LINE L1 -6479 63 5 380 222 0 10 chr18 9329469 9329568 -77347980 - L1MB8 LINE L1 0 6178 6081 346 288 11 34 chr18 9331185 9331362 -77346186 + CT-rich Low_complexity Low_complexity 3 175 0 202 262 36 12 chr18 9331647 9331731 -77345817 + CT-rich Low_complexity Low_complexity 6 91 0 24 0 0 0 chr18 9333239 9333263 -77344285 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr18 9333289 9333309 -77344239 + (A)n Simple_repeat Simple_repeat 1 20 0 21 57 0 0 chr18 9333876 9333911 -77343637 + GC_rich Low_complexity Low_complexity 1 35 0 938 213 221 12 chr18 9337029 9337273 -77340275 - AluSx SINE Alu -5 297 3 230 211 10 106 chr18 9337656 9337760 -77339788 + MIR SINE MIR 17 110 -98 819 205 30 116 chr18 9338302 9338829 -77338719 + L1 LINE L1 3036 3517 -2629 22 0 0 0 chr18 9339082 9339104 -77338444 + AT_rich Low_complexity Low_complexity 1 22 0 31 26 0 0 chr18 9339658 9339696 -77337852 + AT_rich Low_complexity Low_complexity 1 38 0 38 0 0 0 chr18 9339798 9339836 -77337712 + AT_rich Low_complexity Low_complexity 1 38 0 216 0 0 0 chr18 9339871 9339895 -77337653 + (A)n Simple_repeat Simple_repeat 1 24 0 450 332 5 19 chr18 9340608 9340813 -77336735 - AluYa5 SINE Alu -9 302 101 22 0 0 0 chr18 9341062 9341084 -77336464 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr18 9341133 9341162 -77336386 + AT_rich Low_complexity Low_complexity 1 29 0 925 175 0 69 chr18 9342406 9342595 -77334953 + FRAM SINE Alu 1 40 0 22 35 0 0 chr18 9344253 9344282 -77333266 + AT_rich Low_complexity Low_complexity 1 29 0 1909 116 11 0 chr18 9344283 9344551 -77332997 - L1PB1 LINE L1 -1 6150 5880 256 159 45 0 chr18 9344837 9344881 -77332667 - MER75 DNA T2_type 0 504 459 393 254 148 7 chr18 9344933 9345075 -77332473 - L1ME3A LINE L1 -20 6150 5989 339 91 0 0 chr18 9345100 9345144 -77332404 - L1PB1 LINE L1 -58 6093 6050 2058 188 60 11 chr18 9345212 9345679 -77331869 - L1MD2 LINE L1 0 6359 5870 2347 59 0 20 chr18 9346109 9346415 -77331133 + AluY SINE Alu 1 300 -11 697 190 29 63 chr18 9349741 9349915 -77327633 + MER5B DNA MER1_type 4 171 -7 21 0 0 0 chr18 9350269 9350290 -77327258 + AT_rich Low_complexity Low_complexity 1 21 0 2350 89 0 16 chr18 9351038 9351351 -77326197 - AluSc SINE Alu -1 308 1 1909 116 27 20 chr18 9352060 9352353 -77325195 - AluSq SINE Alu -18 295 1 21 36 0 0 chr18 9353076 9353104 -77324444 + AT_rich Low_complexity Low_complexity 1 28 0 1240 132 5 16 chr18 9353236 9353426 -77324122 + AluJb SINE Alu 113 300 -12 256 213 0 0 chr18 9353706 9353753 -77323795 - MER103 DNA DNA -64 102 56 1749 91 4 33 chr18 9353812 9354055 -77323493 + AluSq SINE Alu 1 236 -77 1351 183 116 6 chr18 9354155 9354510 -77323038 - Charlie5 DNA MER1_type -35 2577 2184 298 330 29 0 chr18 9354512 9354615 -77322933 - Charlie5 DNA MER1_type -2506 106 1 676 198 0 101 chr18 9355912 9356160 -77321388 + AluSx SINE Alu 2 224 -88 248 327 19 0 chr18 9356283 9356387 -77321161 + MIR SINE MIR 75 180 -82 1887 125 34 3 chr18 9357224 9357521 -77320027 + AluY SINE Alu 1 306 -5 1684 220 153 18 chr18 9357589 9358084 -77319464 + MER68 LTR ERV1 1 562 0 230 316 102 0 chr18 9358885 9358983 -77318565 + L2 LINE L2 3141 3248 -24 180 0 0 0 chr18 9358993 9359013 -77318535 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 259 184 20 0 chr18 9359574 9359623 -77317925 + MIR SINE MIR 87 136 -72 30 0 0 0 chr18 9359983 9360013 -77317535 + AT_rich Low_complexity Low_complexity 1 30 0 2345 107 3 0 chr18 9360068 9360377 -77317171 - AluSx SINE Alu -2 310 1 219 312 102 57 chr18 9361594 9361751 -77315797 + L2 LINE L2 3108 3271 -1 2208 82 32 3 chr18 9363098 9363380 -77314168 - AluSx SINE Alu -13 299 10 369 0 0 0 chr18 9365232 9365273 -77312275 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 1729 154 4 14 chr18 9365273 9365552 -77311996 - AluJo SINE Alu -36 276 1 423 279 0 0 chr18 9367673 9367784 -77309764 + L1MC4 LINE L1 7932 8042 0 799 183 0 0 chr18 9368028 9368154 -77309394 + FLAM_C SINE Alu 1 126 -7 2533 38 0 0 chr18 9368260 9368547 -77309001 + AluY SINE Alu 1 287 -24 2324 64 0 45 chr18 9369455 9369769 -77307779 + AluY SINE Alu 1 300 -11 23 0 0 0 chr18 9370686 9370709 -77306839 + AT_rich Low_complexity Low_complexity 1 23 0 708 190 29 63 chr18 9373090 9373264 -77304284 + MER5B DNA MER1_type 4 171 -7 21 0 0 0 chr18 9373618 9373639 -77303909 + AT_rich Low_complexity Low_complexity 1 21 0 2236 89 0 16 chr18 9374383 9374696 -77302852 - AluSc SINE Alu -1 308 1 1808 116 27 20 chr18 9375405 9375698 -77301850 - AluSq SINE Alu -18 295 1 21 36 0 0 chr18 9376421 9376449 -77301099 + AT_rich Low_complexity Low_complexity 1 28 0 1161 126 5 21 chr18 9376581 9376772 -77300776 + AluJb SINE Alu 113 300 -12 274 191 0 0 chr18 9377052 9377099 -77300449 - MER103 DNA DNA -64 102 56 2151 95 3 22 chr18 9377158 9377474 -77300074 + AluSx SINE Alu 1 310 -2 1650 215 157 14 chr18 9377542 9378034 -77299514 + MER68 LTR ERV1 1 562 0 226 316 102 0 chr18 9378836 9378934 -77298614 + L2 LINE L2 3141 3248 -24 180 0 0 0 chr18 9378944 9378964 -77298584 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 271 180 0 0 chr18 9379525 9379575 -77297973 + MIR SINE MIR 86 135 -127 29 0 0 0 chr18 9379935 9379964 -77297584 + AT_rich Low_complexity Low_complexity 1 29 0 2241 101 3 3 chr18 9380020 9380328 -77297220 - AluSx SINE Alu -4 308 1 232 289 81 81 chr18 9381553 9381702 -77295846 + L2 LINE L2 3164 3312 -1 208 291 230 7 chr18 9382776 9382924 -77294624 + MIR SINE MIR 12 192 -70 252 59 0 0 chr18 9383309 9383343 -77294205 + (CA)n Simple_repeat Simple_repeat 2 35 0 196 296 51 20 chr18 9383668 9383766 -77293782 - MIR3 SINE MIR -16 192 92 1683 177 0 19 chr18 9385136 9385447 -77292101 + AluJb SINE Alu 1 305 -7 2306 85 0 25 chr18 9385698 9386015 -77291533 - AluSc SINE Alu 0 309 1 352 336 102 34 chr18 9386032 9386297 -77291251 + L3 LINE CR1 1237 1519 -58 207 287 53 11 chr18 9386723 9386817 -77290731 - MIR SINE MIR -117 145 48 2014 121 0 0 chr18 9387396 9387677 -77289871 + AluSx SINE Alu 1 281 -31 2050 108 3 3 chr18 9389484 9389780 -77287768 - AluSx SINE Alu -16 296 1 1693 232 45 60 chr18 9390146 9390335 -77287213 - L1ME LINE L1 -5153 917 727 2218 91 0 0 chr18 9390335 9390631 -77286917 + AluY SINE Alu 1 296 -15 1693 232 45 60 chr18 9390631 9391023 -77286525 - L1ME LINE L1 -5343 727 345 913 252 66 0 chr18 9392793 9393035 -77284513 - MIR SINE MIR -3 259 2 1935 101 30 14 chr18 9393672 9393968 -77283580 - AluSc SINE Alu -8 301 1 571 178 0 25 chr18 9394774 9394892 -77282656 + L1MB8 LINE L1 6064 6178 0 183 42 0 0 chr18 9395255 9395279 -77282269 + (T)n Simple_repeat Simple_repeat 1 24 0 1978 118 0 10 chr18 9395493 9395789 -77281759 + AluSx SINE Alu 17 309 -3 539 274 32 57 chr18 9395818 9396015 -77281533 - L1MCa LINE L1 -3950 2476 2285 3648 111 6 7 chr18 9396015 9396555 -77280993 - L1PB2 LINE L1 0 6151 5613 539 274 32 57 chr18 9396555 9396605 -77280943 - L1MCa LINE L1 -4141 2285 2235 1310 281 103 87 chr18 9396633 9396717 -77280831 - L2 LINE L2 -22 3291 3210 2193 118 0 0 chr18 9396717 9397030 -77280518 + AluSq SINE Alu 1 313 0 1310 281 103 87 chr18 9397030 9397074 -77280474 - L2 LINE L2 -103 3210 3168 180 77 0 0 chr18 9397074 9397100 -77280448 + (TG)n Simple_repeat Simple_repeat 1 26 0 1310 281 103 87 chr18 9397100 9397864 -77279684 - L2 LINE L2 -145 3168 2383 186 43 0 0 chr18 9397864 9397887 -77279661 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 1310 281 103 87 chr18 9397887 9398067 -77279481 - L2 LINE L2 -930 2383 2207 19608 63 4 2 chr18 9398082 9401403 -77276145 - L1PA6 LINE L1 0 6154 2828 2234 96 0 3 chr18 9401406 9401718 -77275830 - AluY SINE Alu 0 311 1 2136 108 0 0 chr18 9402395 9402682 -77274866 - AluSc SINE Alu -22 287 1 6324 113 206 106 chr18 9403032 9404574 -77272974 + pTR5 LTR ERV1 743 2438 0 2410 80 3 0 chr18 9405787 9406099 -77271449 + AluSp SINE Alu 1 313 0 1812 156 27 0 chr18 9406113 9406414 -77271134 + AluJb SINE Alu 1 309 -3 2026 161 37 5 chr18 9406518 9406896 -77270652 + MLT1B LTR MaLR 1 390 0 2194 96 6 6 chr18 9407812 9408124 -77269424 - AluSx SINE Alu 0 312 1 1323 194 106 33 chr18 9408258 9408625 -77268923 - MER110A LTR ERV1 -74 394 1 205 272 19 39 chr18 9409041 9409144 -77268404 + C-rich Low_complexity Low_complexity 2 102 0 495 211 44 0 chr18 9409548 9409662 -77267886 - MER96B DNA MER1_type? 0 417 299 2308 81 3 3 chr18 9410285 9410592 -77266956 + AluY SINE Alu 1 307 -4 2018 111 3 3 chr18 9410731 9411019 -77266529 + AluSx SINE Alu 1 288 -24 1642 166 21 0 chr18 9411175 9411464 -77266084 - AluJb SINE Alu -17 295 1 260 291 165 16 chr18 9411868 9411995 -77265553 + MIR SINE MIR 96 241 -21 837 306 35 0 chr18 9412635 9412893 -77264655 - MER69 DNA AcHobo -2251 275 9 363 0 0 0 chr18 9413744 9413785 -77263763 - L1PA5 LINE L1 -95 6059 6019 913 69 46 0 chr18 9413785 9413894 -77263654 + L1PA5 LINE L1 6019 6154 0 2091 106 0 0 chr18 9414667 9414989 -77262559 - AluSx SINE Alu 0 322 1 419 227 98 23 chr18 9415416 9415548 -77262000 - MIR SINE MIR -112 150 9 1671 229 54 16 chr18 9416022 9416463 -77261085 - MLT1C LTR MaLR -8 459 2 475 309 69 48 chr18 9418004 9418337 -77259211 + L2 LINE L2 2170 2509 -805 503 240 10 115 chr18 9418419 9418611 -77258937 - MIR SINE MIR 0 262 91 2069 112 3 6 chr18 9418622 9418934 -77258614 + AluSx SINE Alu 1 311 -1 194 267 93 27 chr18 9418968 9419043 -77258505 - L2 LINE L2 -97 3175 3096 891 293 53 18 chr18 9419228 9419621 -77257927 - MLT1I LTR MaLR 0 409 3 2132 68 21 7 chr18 9419806 9420133 -77257415 + AluY SINE Alu 1 331 0 334 208 28 0 chr18 9420137 9420209 -77257339 - MIR SINE MIR -11 251 178 1046 176 129 58 chr18 9420751 9421046 -77256502 - MSTD LTR MaLR -7 389 74 2326 56 7 10 chr18 9421046 9421348 -77256200 - AluY SINE Alu -10 301 1 2026 110 45 3 chr18 9421348 9421639 -77255909 - AluSx SINE Alu -9 303 1 510 297 67 14 chr18 9421718 9421927 -77255621 + L1M4 LINE L1 3689 3908 -2238 658 159 22 7 chr18 9421928 9422066 -77255482 - Charlie5 DNA MER1_type 0 2624 2485 605 213 33 20 chr18 9422074 9422224 -77255324 - Charlie5 DNA MER1_type -230 2382 2231 601 153 48 32 chr18 9422212 9422336 -77255212 - Charlie5 DNA MER1_type -2485 127 2 * 1244 14 7 0 chr18 9422541 9422684 -77254864 + L1PA5 LINE L1 5998 6141 -13 423 0 0 0 chr18 9422688 9422735 -77254813 + (TA)n Simple_repeat Simple_repeat 2 48 0 2269 100 0 0 chr18 9422760 9423060 -77254488 + AluSc SINE Alu 2 301 -8 618 208 6 40 chr18 9423128 9423301 -77254247 + L1MB8 LINE L1 6008 6174 -4 254 290 199 38 chr18 9423408 9423594 -77253954 - MIR SINE MIR -1 261 46 837 148 112 13 chr18 9425323 9425488 -77252060 - MSTC LTR MaLR -2 424 245 1167 99 18 0 chr18 9425509 9425680 -77251868 + AluSc SINE Alu 135 308 -1 2314 103 0 0 chr18 9425710 9426020 -77251528 + AluSq SINE Alu 3 312 -1 868 274 54 69 chr18 9426144 9426663 -77250885 + MLT1J LTR MaLR 1 511 0 432 55 0 0 chr18 9427198 9427253 -77250295 + (TG)n Simple_repeat Simple_repeat 2 56 0 842 119 0 0 chr18 9427253 9427371 -77250177 - AluSq/x SINE Alu -192 120 3 260 27 27 0 chr18 9427742 9427779 -77249769 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 5495 16 0 0 chr18 9427779 9428389 -77249159 - L1PA3 LINE L1 -13 6142 5533 2157 86 0 38 chr18 9428675 9428989 -77248559 - AluSq SINE Alu -11 302 1 1978 112 7 3 chr18 9428998 9429284 -77248264 - AluSq SINE Alu -26 287 1 229 250 0 0 chr18 9429947 9429995 -77247553 + L1MD1 LINE L1 5547 5594 -527 2190 153 23 20 chr18 9430015 9430413 -77247135 - L1MB3 LINE L1 -3 6180 5782 2181 86 3 10 chr18 9430443 9430747 -77246801 - AluSp SINE Alu -9 304 3 231 279 0 0 chr18 9430749 9430810 -77246738 + L1MD1 LINE L1 5602 5662 -459 395 254 0 43 chr18 9431205 9431343 -77246205 + MER77 LTR ERV1 66 197 -408 905 283 68 50 chr18 9431373 9431578 -77245970 + MER77 LTR ERV1 141 341 -333 1862 136 37 0 chr18 9431578 9431873 -77245675 + AluSx SINE Alu 1 306 -6 905 283 68 50 chr18 9431873 9432216 -77245332 + MER77 LTR ERV1 341 670 -4 2051 143 0 0 chr18 9432276 9432584 -77244964 - AluSx SINE Alu -4 308 1 2045 77 63 3 chr18 9432624 9432909 -77244639 - AluY SINE Alu -8 303 2 2244 74 0 7 chr18 9432997 9433293 -77244255 - AluSc SINE Alu -15 294 1 245 276 0 23 chr18 9433387 9433474 -77244074 + L1MD1 LINE L1 5692 5776 -386 982 172 0 0 chr18 9433575 9433744 -77243804 - FRAM SINE Alu -8 168 1 2225 81 37 0 chr18 9433775 9434073 -77243475 + AluSg SINE Alu 1 309 -1 1642 228 171 13 chr18 9434482 9435036 -77242512 + MLT1E2 LTR MaLR 1 626 0 308 235 106 0 chr18 9435088 9435173 -77242375 + MIR SINE MIR 113 206 -56 24 0 0 0 chr18 9435399 9435423 -77242125 + AT_rich Low_complexity Low_complexity 1 24 0 2317 87 0 0 chr18 9435450 9435748 -77241800 - AluSq SINE Alu -15 298 1 987 101 0 0 chr18 9436331 9436469 -77241079 - AluSp/q SINE Alu -19 294 157 180 0 0 0 chr18 9436524 9436544 -77241004 + (TTA)n Simple_repeat Simple_repeat 3 22 0 2418 51 0 16 chr18 9436574 9436888 -77240660 - AluY SINE Alu -2 309 1 849 97 15 22 chr18 9436890 9437024 -77240524 - AluSq/x SINE Alu -180 133 1 1933 114 0 17 chr18 9437124 9437433 -77240115 + AluSx SINE Alu 1 304 0 198 0 0 0 chr18 9437684 9437706 -77239842 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 2206 105 0 0 chr18 9437993 9438288 -77239260 - AluSq SINE Alu -18 295 1 379 290 39 28 chr18 9438387 9438403 -77239145 + L1MCa LINE L1 2088 2102 -4416 2316 142 24 0 chr18 9438403 9438784 -77238764 + MLT1B LTR MaLR 1 390 0 379 290 39 28 chr18 9438784 9438955 -77238593 + L1MCa LINE L1 2102 2336 -4182 806 146 0 31 chr18 9439036 9439166 -77238382 - FLAM_C SINE Alu -16 127 2 1183 253 100 23 chr18 9440125 9440434 -77237114 + L1MD1 LINE L1 5779 6132 -110 2049 73 11 4 chr18 9440434 9440706 -77236842 + AluSq SINE Alu 24 297 -16 1183 253 100 23 chr18 9440706 9440827 -77236721 + L1MD1 LINE L1 6132 6242 0 310 220 0 0 chr18 9440830 9440889 -77236659 + L1MC4 LINE L1 7845 7903 -139 240 333 44 0 chr18 9441338 9441452 -77236096 + MIR SINE MIR 31 149 -59 288 263 22 51 chr18 9441782 9441919 -77235629 - LTR33 LTR ERVL -134 387 255 614 169 76 120 chr18 9443426 9443610 -77233938 + LTR8 LTR ERV1 1 177 -514 397 95 0 32 chr18 9443615 9443678 -77233870 + MER87 LTR ERV1 116 176 -365 571 172 0 172 chr18 9443678 9443864 -77233684 + LTR8A LTR ERV1 135 288 -439 228 195 0 0 chr18 9443864 9443905 -77233643 + LTR8A LTR ERV1 246 286 -441 962 185 113 91 chr18 9443967 9444383 -77233165 + LTR8A LTR ERV1 303 727 0 399 302 104 25 chr18 9444508 9444710 -77232838 - L2 LINE L2 -1 3312 3095 340 209 52 61 chr18 9445087 9445202 -77232346 - L2 LINE L2 -3 3310 3197 699 306 66 61 chr18 9445544 9446135 -77231413 - L2 LINE L2 -557 2757 2164 1186 185 0 66 chr18 9446501 9446728 -77230820 + MER44D DNA MER2_type 1 212 -493 2028 158 29 3 chr18 9447178 9447525 -77230023 + MER44D DNA MER2_type 194 604 -1 1000 219 0 0 chr18 9447531 9447714 -77229834 + MIR SINE MIR 24 206 -56 612 321 146 30 chr18 9447805 9448817 -77228731 - L2 LINE L2 -1703 1611 482 297 0 0 0 chr18 9451293 9451326 -77226222 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 327 321 18 9 chr18 9451450 9451559 -77225989 - MIR SINE MIR -66 142 33 1888 81 4 15 chr18 9451733 9451994 -77225554 - AluSg SINE Alu -16 294 37 2982 166 46 12 chr18 9454046 9454632 -77222916 + L1MB5 LINE L1 5569 6174 0 331 312 88 12 chr18 9454710 9454880 -77222668 + MIR SINE MIR 28 210 -52 1720 158 35 0 chr18 9456090 9456375 -77221173 + AluJo SINE Alu 1 295 -17 396 250 68 45 chr18 9457041 9457173 -77220375 + MIR3 SINE MIR 64 198 -10 1238 204 73 58 chr18 9458187 9458569 -77218979 + MLT1B LTR MaLR 1 388 -2 695 280 126 0 chr18 9461340 9461554 -77215994 + MIR SINE MIR 1 241 -21 262 278 35 46 chr18 9461598 9461743 -77215805 - MIR SINE MIR -62 146 13 787 100 277 0 chr18 9463094 9463224 -77214324 - AluJb SINE Alu -18 294 129 388 62 0 0 chr18 9463228 9463276 -77214272 - Alu SINE Alu -247 61 14 422 250 24 73 chr18 9463304 9463468 -77214080 - MER103 DNA DNA -3 163 8 230 311 8 76 chr18 9464407 9464539 -77213009 - MIR SINE MIR -67 141 19 2034 103 39 0 chr18 9464578 9464860 -77212688 - AluSx SINE Alu -16 296 4 21 0 0 0 chr18 9465572 9465593 -77211955 + AT_rich Low_complexity Low_complexity 1 21 0 190 235 0 157 chr18 9466107 9466222 -77211326 - MIR3 SINE MIR -6 202 106 2268 79 3 7 chr18 9466637 9466941 -77210607 - AluSp SINE Alu -10 303 1 242 310 106 42 chr18 9467235 9467377 -77210171 + L2 LINE L2 2590 2740 -574 1570 179 3 19 chr18 9467726 9468033 -77209515 - AluJo SINE Alu -10 302 1 290 208 0 21 chr18 9468198 9468294 -77209254 - L1MA7 LINE L1 0 6291 6198 * 552 76 84 84 chr18 9468271 9468390 -77209158 + L1MA7 LINE L1 5727 5845 -446 2141 86 31 3 chr18 9468397 9468689 -77208859 - AluSx SINE Alu -3 309 10 378 0 0 0 chr18 9470539 9470581 -77206967 + (TTTA)n Simple_repeat Simple_repeat 1 42 0 1629 169 0 11 chr18 9470581 9470860 -77206688 - AluJo SINE Alu -36 276 1 437 270 0 0 chr18 9472981 9473092 -77204456 + L1MC4 LINE L1 7932 8042 0 754 183 0 0 chr18 9473336 9473462 -77204086 + FLAM_C SINE Alu 1 126 -7 2428 38 0 0 chr18 9473568 9473855 -77203693 + AluY SINE Alu 1 287 -24 2440 62 0 29 chr18 9474763 9475072 -77202476 + AluY SINE Alu 1 300 -11 697 190 29 63 chr18 9478398 9478572 -77198976 + MER5B DNA MER1_type 4 171 -7 21 0 0 0 chr18 9478926 9478947 -77198601 + AT_rich Low_complexity Low_complexity 1 21 0 2350 89 0 16 chr18 9479695 9480008 -77197540 - AluSc SINE Alu -1 308 1 1909 116 27 20 chr18 9480716 9481009 -77196539 - AluSq SINE Alu -18 295 1 21 36 0 0 chr18 9481732 9481760 -77195788 + AT_rich Low_complexity Low_complexity 1 28 0 1240 132 5 16 chr18 9481892 9482082 -77195466 + AluJb SINE Alu 113 300 -12 256 213 0 0 chr18 9482362 9482409 -77195139 - MER103 DNA DNA -64 102 56 2207 93 6 26 chr18 9482468 9482781 -77194767 + AluSx SINE Alu 1 307 -5 1711 220 151 18 chr18 9482849 9483345 -77194203 + MER68 LTR ERV1 1 562 0 230 316 102 0 chr18 9484147 9484245 -77193303 + L2 LINE L2 3141 3248 -24 180 0 0 0 chr18 9484255 9484275 -77193273 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 268 180 0 0 chr18 9484836 9484886 -77192662 + MIR SINE MIR 86 135 -127 30 0 0 0 chr18 9485246 9485276 -77192272 + AT_rich Low_complexity Low_complexity 1 30 0 2345 107 3 0 chr18 9485331 9485640 -77191908 - AluSx SINE Alu -2 310 1 219 312 102 57 chr18 9486857 9487014 -77190534 + L2 LINE L2 3108 3271 -1 261 57 0 0 chr18 9488619 9488654 -77188894 + (CA)n Simple_repeat Simple_repeat 2 36 0 184 296 51 20 chr18 9488974 9489072 -77188476 - MIR3 SINE MIR -16 192 92 1790 177 0 19 chr18 9490441 9490752 -77186796 + AluJb SINE Alu 1 305 -7 2383 88 0 25 chr18 9491003 9491320 -77186228 - AluSc SINE Alu 0 309 1 316 330 105 35 chr18 9491344 9491602 -77185946 + L3 LINE CR1 1244 1519 -58 200 287 53 11 chr18 9492028 9492122 -77185426 - MIR SINE MIR -117 145 48 2099 125 0 0 chr18 9492701 9492982 -77184566 + AluSx SINE Alu 1 281 -31 287 331 66 6 chr18 9495195 9495376 -77182172 - L1ME LINE L1 -313 5808 5617 25 31 0 0 chr18 9495376 9495408 -77182140 + AT_rich Low_complexity Low_complexity 1 32 0 1739 161 3 13 chr18 9496824 9497123 -77180425 - AluJo SINE Alu -6 306 11 2330 76 0 26 chr18 9497206 9497508 -77180040 - AluY SINE Alu -17 294 1 2268 92 3 0 chr18 9498310 9498602 -77178946 - AluSp SINE Alu -20 293 1 340 321 37 9 chr18 9499284 9499393 -77178155 + L3 LINE CR1 1385 1496 -81 2108 132 10 0 chr18 9499417 9499721 -77177827 + AluSx SINE Alu 1 307 -5 2251 168 3 0 chr18 9500498 9500844 -77176704 - MER7A DNA MER2_type 0 346 2 3154 161 36 28 chr18 9501249 9501864 -77175684 + L1MB3 LINE L1 5302 5921 -262 1064 109 0 0 chr18 9501864 9502036 -77175512 - AluSg/x SINE Alu 0 317 146 1298 183 20 0 chr18 9502053 9502305 -77175243 + L1MB3 LINE L1 5922 6178 -5 274 368 26 0 chr18 9503462 9503576 -77173972 + L2 LINE L2 3155 3271 -1 2104 107 0 0 chr18 9503786 9504057 -77173491 - AluSx SINE Alu -41 271 1 414 197 0 0 chr18 9504854 9504920 -77172628 + Tigger3(Golem) DNA MER2_type 11 76 -2953 300 214 0 18 chr18 9504930 9504986 -77172562 + Tigger3(Golem) DNA MER2_type 2974 3028 -1 182 306 204 27 chr18 9506266 9506413 -77171135 - MER5A DNA MER1_type 0 189 17 1078 90 0 0 chr18 9506428 9506606 -77170942 - AluSx SINE Alu 0 328 151 583 133 12 0 chr18 9506606 9506689 -77170859 - AluSx SINE Alu -228 85 2 2523 61 0 13 chr18 9507033 9507346 -77170202 + AluY SINE Alu 1 309 -2 789 269 71 49 chr18 9507673 9508303 -77169245 - L1MC5 LINE L1 -192 7769 7289 2106 125 3 0 chr18 9508587 9508882 -77168666 - AluSx SINE Alu -16 296 1 2341 94 3 3 chr18 9508888 9509197 -77168351 - AluSp SINE Alu -4 309 1 21 0 0 0 chr18 9509203 9509224 -77168324 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr18 9509533 9509569 -77167979 + (T)n Simple_repeat Simple_repeat 1 36 0 3913 157 52 42 chr18 9510199 9510404 -77167144 + L1MB3 LINE L1 5383 5584 -599 2152 89 4 4 chr18 9510404 9510684 -77166864 + AluSc SINE Alu 1 280 -29 243 0 0 0 chr18 9510687 9510714 -77166834 + (CA)n Simple_repeat Simple_repeat 2 28 0 3913 157 52 42 chr18 9510714 9511296 -77166252 + L1MB3 LINE L1 5585 6182 -1 283 249 52 3 chr18 9511325 9511444 -77166104 - LTR50 LTR ERVL 0 795 400 618 265 24 0 chr18 9512576 9512746 -77164802 - MIR SINE MIR 0 262 89 219 304 35 52 chr18 9513248 9513363 -77164185 - MIR SINE MIR -115 147 35 652 229 147 95 chr18 9514542 9515088 -77162460 - MLT1G LTR MaLR -7 583 10 2246 98 3 0 chr18 9516384 9516679 -77160869 + AluSp SINE Alu 1 296 -17 1530 192 59 70 chr18 9516849 9517307 -77160241 - L1ME2 LINE L1 -9 6155 5703 380 189 22 11 chr18 9517327 9517417 -77160131 - L1MEc LINE L1 -6213 183 93 515 301 64 10 chr18 9517478 9517774 -77159774 - L1ME LINE L1 -298 5823 5512 1886 150 0 24 chr18 9518805 9519099 -77158449 - AluSx SINE Alu -25 287 1 563 103 35 0 chr18 9519155 9519242 -77158306 - L1MC2 LINE L1 -1 6343 6254 2338 93 7 0 chr18 9519283 9519583 -77157965 - AluY SINE Alu -9 302 1 240 160 0 0 chr18 9520264 9520314 -77157234 - L1MB4 LINE L1 -5 6175 6126 3752 124 27 15 chr18 9520542 9521138 -77156410 - L1MB3 LINE L1 -40 6143 5541 202 400 0 0 chr18 9522396 9522476 -77155072 + L2 LINE L2 3229 3308 -5 1760 156 3 11 chr18 9523381 9523663 -77153885 - AluJb SINE Alu -32 280 1 2467 90 0 0 chr18 9525347 9525646 -77151902 + AluSq SINE Alu 1 299 -14 1916 167 68 0 chr18 9525729 9526094 -77151454 - MLT1B LTR MaLR 0 390 1 2202 110 0 28 chr18 9526435 9526753 -77150795 + AluSg SINE Alu 1 309 -1 1930 165 0 13 chr18 9526758 9527074 -77150474 + AluJb SINE Alu 1 312 0 651 197 93 44 chr18 9527190 9527373 -77150175 + MIR SINE MIR 3 194 -68 2064 123 28 0 chr18 9527377 9527662 -77149886 + AluSx SINE Alu 5 297 -15 384 224 196 17 chr18 9527952 9528131 -77149417 + MIR SINE MIR 28 238 -24 2342 68 10 3 chr18 9528445 9528738 -77148810 - AluY SINE Alu -16 295 1 210 284 0 15 chr18 9529020 9529059 -77148489 + (TA)n Simple_repeat Simple_repeat 2 41 -26 2410 87 0 10 chr18 9529059 9529368 -77148180 - AluSx SINE Alu -6 306 1 210 284 0 15 chr18 9529368 9529395 -77148153 + (TA)n Simple_repeat Simple_repeat 41 67 0 243 0 0 0 chr18 9529397 9529424 -77148124 + (CA)n Simple_repeat Simple_repeat 2 28 0 2162 132 19 100 chr18 9529424 9529894 -77147654 - Tigger2a DNA MER2_type -2 432 1 834 332 122 29 chr18 9529949 9530466 -77147082 + L3 LINE CR1 814 1412 -165 1734 148 48 14 chr18 9530466 9530756 -77146792 + AluJb SINE Alu 1 300 -12 834 332 122 29 chr18 9530756 9530925 -77146623 + L3 LINE CR1 1412 1564 -13 4658 129 54 56 chr18 9531022 9531484 -77146064 - L1MC2 LINE L1 -9 6335 5873 2061 113 14 3 chr18 9531484 9531795 -77145753 - AluY SINE Alu 0 314 1 2009 127 7 0 chr18 9531801 9532092 -77145456 - AluSq SINE Alu -20 293 1 1797 168 0 7 chr18 9532093 9532390 -77145158 - AluSx SINE Alu -17 295 1 4658 129 54 56 chr18 9532390 9532808 -77144740 - L1MC2 LINE L1 -475 5869 5446 1878 168 54 16 chr18 9533174 9533560 -77143988 - L1MA9 LINE L1 -31 6281 5881 262 203 0 17 chr18 9534676 9534735 -77142813 - L1ME2 LINE L1 -2 6162 6105 2178 132 3 0 chr18 9534938 9535241 -77142307 + AluSx SINE Alu 1 304 -8 245 233 0 17 chr18 9535790 9535850 -77141698 - L1ME2 LINE L1 -2 6162 6104 433 243 29 0 chr18 9535865 9535982 -77141566 - L1ME2 LINE L1 -499 5665 5558 727 196 0 22 chr18 9535985 9536123 -77141425 + FLAM_C SINE Alu 1 135 -8 465 268 82 16 chr18 9536123 9536306 -77141242 - L1ME2 LINE L1 -596 5566 5372 2172 223 116 48 chr18 9536320 9537140 -77140408 - L1ME2 LINE L1 -813 5333 4458 2413 83 3 0 chr18 9537195 9537495 -77140053 + AluSg SINE Alu 1 301 -9 666 241 60 5 chr18 9537517 9537716 -77139832 + L1M4 LINE L1 4195 4404 -1742 356 242 86 8 chr18 9537753 9537881 -77139667 - L1ME2 LINE L1 -2267 3879 3742 379 87 159 0 chr18 9538467 9538536 -77139012 - L1MB3 LINE L1 0 6183 6104 2143 130 0 10 chr18 9538682 9538981 -77138567 + AluSx SINE Alu 5 300 -12 1563 96 9 22 chr18 9539039 9539268 -77138280 - AluSq SINE Alu -5 308 83 898 281 35 51 chr18 9540304 9540351 -77137197 - L1MC4a LINE L1 -1879 5929 5883 2443 64 0 26 chr18 9540351 9540663 -77136885 - AluY SINE Alu -7 304 1 898 281 35 51 chr18 9540663 9540988 -77136560 - L1MC4a LINE L1 -1925 5883 5563 2472 76 0 7 chr18 9541631 9541934 -77135614 - AluSc SINE Alu -8 301 1 384 273 193 36 chr18 9542498 9542773 -77134775 - L2 LINE L2 0 3313 2996 249 180 0 0 chr18 9543131 9543181 -77134367 + (ATG)n Simple_repeat Simple_repeat 3 52 0 2709 176 64 22 chr18 9543393 9543983 -77133565 - L1MB8 LINE L1 -22 6156 5542 1022 252 5 0 chr18 9544025 9544247 -77133301 + MER58A DNA MER1_type 2 224 0 809 228 12 12 chr18 9544788 9544955 -77132593 + MER58A DNA MER1_type 1 167 0 1858 149 24 3 chr18 9548820 9549109 -77128439 + AluJo SINE Alu 1 295 -17 21 57 0 0 chr18 9549773 9549808 -77127740 + AT_rich Low_complexity Low_complexity 1 35 0 2098 133 0 3 chr18 9550501 9550795 -77126753 + AluSx SINE Alu 1 293 -19 2272 73 31 3 chr18 9551066 9551352 -77126196 - AluSc SINE Alu -15 294 1 578 178 0 25 chr18 9552159 9552277 -77125271 + L1MB8 LINE L1 6064 6178 0 657 227 0 8 chr18 9552835 9552984 -77124564 - AluJb SINE Alu 0 303 156 180 0 0 0 chr18 9553686 9553706 -77123842 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 2038 222 64 42 chr18 9553863 9554441 -77123107 - L1MC2 LINE L1 -4 7976 6200 24 32 0 0 chr18 9554463 9554494 -77123054 + AT_rich Low_complexity Low_complexity 1 31 0 434 234 37 0 chr18 9555245 9555352 -77122196 + MER5A DNA MER1_type 16 126 -63 731 280 145 26 chr18 9555794 9556577 -77120971 - L1MEc LINE L1 -4541 1855 933 2333 97 0 0 chr18 9556577 9556876 -77120672 - AluSx SINE Alu -13 299 1 731 280 145 26 chr18 9556876 9556991 -77120557 - L1MEc LINE L1 -5463 933 833 1264 271 84 55 chr18 9557047 9557537 -77120011 - L1MC4 LINE L1 0 8042 7516 2140 88 46 0 chr18 9557537 9557821 -77119727 - AluY SINE Alu -14 297 1 1264 271 84 55 chr18 9557821 9558177 -77119371 - L1MC4 LINE L1 -526 7516 7172 249 122 0 0 chr18 9558970 9559011 -77118537 - L2 LINE L2 0 3313 3273 245 275 107 7 chr18 9559188 9559337 -77118211 - L2 LINE L2 -270 3002 2839 1983 136 3 19 chr18 9560394 9560703 -77116845 + AluSx SINE Alu 1 304 -8 193 254 146 0 chr18 9562293 9562348 -77115200 - L2 LINE L2 -1 3271 3209 305 305 46 8 chr18 9562473 9562604 -77114944 + MIR SINE MIR 76 211 -51 415 78 26 0 chr18 9562671 9562748 -77114800 + (TATAA)n Simple_repeat Simple_repeat 5 83 0 1572 183 103 5 chr18 9562760 9563158 -77114390 - Charlie5 DNA MER1_type 0 2620 2184 299 330 29 0 chr18 9563160 9563263 -77114285 - Charlie5 DNA MER1_type -2506 106 1 2355 116 0 0 chr18 9564556 9564866 -77112682 + AluSx SINE Alu 1 310 -2 216 327 19 0 chr18 9564902 9565006 -77112542 + MIR SINE MIR 75 180 -82 2593 51 0 0 chr18 9565843 9566138 -77111410 + AluY SINE Alu 1 295 -16 2263 99 26 7 chr18 9566176 9566478 -77111070 - AluSp SINE Alu -5 308 1 21 0 0 0 chr18 9567304 9567325 -77110223 + AT_rich Low_complexity Low_complexity 1 21 0 2384 92 0 0 chr18 9567331 9567625 -77109923 + AluSx SINE Alu 1 294 -18 22 0 0 0 chr18 9567693 9567715 -77109833 + AT_rich Low_complexity Low_complexity 1 22 0 377 152 40 28 chr18 9569687 9569819 -77107729 - MER53 DNA DNA 0 189 1 2969 148 89 26 chr18 9570035 9570571 -77106977 - L1MB3 LINE L1 0 6183 5606 2014 117 57 0 chr18 9570571 9570853 -77106695 - AluSx SINE Alu -14 298 1 2969 148 89 26 chr18 9570853 9570898 -77106650 - L1MB3 LINE L1 -577 5606 5565 198 173 62 12 chr18 9570904 9570961 -77106587 + MIR SINE MIR 107 166 -96 246 253 116 20 chr18 9571129 9571275 -77106273 + L1 LINE L1 3606 3765 -2381 840 116 27 27 chr18 9571346 9571492 -77106056 - L1MB1 LINE L1 -17 6172 6027 1001 172 0 0 chr18 9571492 9571649 -77105899 - AluSp SINE Alu -10 303 147 2213 66 38 17 chr18 9572359 9572694 -77104854 - AluY SINE Alu 0 311 1 660 102 28 46 chr18 9573025 9573133 -77104415 + U6 snRNA snRNA 2 107 0 180 0 0 0 chr18 9574261 9574281 -77103267 + (TG)n Simple_repeat Simple_repeat 2 21 0 1793 251 75 49 chr18 9574389 9575332 -77102216 + L1ME3 LINE L1 1017 1984 -4556 1831 252 183 6 chr18 9575343 9576049 -77101499 + L1ME3 LINE L1 5666 6496 -60 311 224 136 20 chr18 9575957 9576104 -77101444 + L1MA10 LINE L1 6563 6726 -2 * 2584 200 53 50 chr18 9576181 9576259 -77101289 + L1 LINE L1 4021 4097 -2049 2239 121 3 0 chr18 9576259 9576564 -77100984 + AluSx SINE Alu 1 306 -6 2584 200 53 50 chr18 9576564 9577186 -77100362 + L1 LINE L1 4097 4723 -1423 741 130 281 26 chr18 9577190 9577382 -77100166 + L1MB3 LINE L1 5943 6183 0 2175 106 17 0 chr18 9577476 9577769 -77099779 + AluSx SINE Alu 1 298 -14 2564 148 16 39 chr18 9578529 9578961 -77098587 - MSTB LTR MaLR -2 424 3 349 286 154 81 chr18 9579917 9580675 -77096873 - L1M2 LINE L1 -5595 1254 441 3274 166 12 71 chr18 9581172 9581822 -77095726 - LTR9 LTR ERV1 0 612 1 558 248 107 0 chr18 9582435 9582584 -77094964 - AluJb SINE Alu -8 304 140 1616 167 23 23 chr18 9583108 9583408 -77094140 - AluJb SINE Alu -12 300 1 1706 161 7 26 chr18 9583462 9583767 -77093781 - AluJo SINE Alu -13 299 1 4268 97 39 2 chr18 9583864 9584423 -77093125 - LTR19B LTR ERV1 0 580 1 724 218 13 0 chr18 9584512 9584668 -77092880 - L1MA10 LINE L1 -7 6327 6170 2533 140 80 0 chr18 9585019 9585419 -77092129 + MSTB1 LTR MaLR 1 432 0 2501 200 95 30 chr18 9586222 9586347 -77091201 - L1ME2 LINE L1 -132 6032 5917 1753 221 85 11 chr18 9586347 9586781 -77090767 - MER31B LTR ERV1 0 466 1 2501 200 95 30 chr18 9586781 9587181 -77090367 - L1ME2 LINE L1 -247 5917 5445 2385 101 0 0 chr18 9587181 9587489 -77090059 - AluY SINE Alu -3 308 1 2501 200 95 30 chr18 9587489 9587686 -77089862 - L1ME2 LINE L1 -719 5445 5262 210 37 0 0 chr18 9587694 9587721 -77089827 + (CA)n Simple_repeat Simple_repeat 2 28 0 2340 164 87 7 chr18 9588673 9589112 -77088436 - MER101 LTR ERV1 0 474 1 419 117 11 58 chr18 9589566 9589754 -77087794 + (CCA)n Simple_repeat Simple_repeat 1 179 0 473 278 59 53 chr18 9589992 9590179 -77087369 - L2 LINE L2 -803 2511 2324 729 233 39 74 chr18 9590245 9590528 -77087020 + L1MA9 LINE L1 6015 6287 -25 3300 248 25 35 chr18 9592157 9592336 -77085212 - L1ME2 LINE L1 -1048 5098 4919 1686 224 97 62 chr18 9592336 9592871 -77084677 - MLT2B3 LTR ERVL 0 554 1 3300 248 25 35 chr18 9592871 9593737 -77083811 - L1ME2 LINE L1 -1227 4919 4064 563 168 52 192 chr18 9593740 9593769 -77083779 - MER20 DNA MER1_type -4 215 184 2106 120 10 0 chr18 9593769 9594069 -77083479 - AluSx SINE Alu -9 303 1 563 168 52 192 chr18 9594069 9594289 -77083259 - MER20 DNA MER1_type -35 184 1 24 32 0 0 chr18 9595414 9595445 -77082103 + AT_rich Low_complexity Low_complexity 1 31 0 240 273 0 0 chr18 9598015 9598070 -77079478 + (TG)n Simple_repeat Simple_repeat 1 55 0 223 286 0 0 chr18 9598140 9598189 -77079359 + T-rich Low_complexity Low_complexity 3 51 0 2201 106 0 0 chr18 9598310 9598615 -77078933 + AluSx SINE Alu 1 305 0 2197 52 37 0 chr18 9598912 9599226 -77078322 + AluY SINE Alu 1 324 0 451 261 274 10 chr18 9599258 9599561 -77077987 - L2 LINE L2 0 3313 2931 1244 276 150 15 chr18 9599577 9600192 -77077356 - L2 LINE L2 -1018 2296 1599 2288 85 0 0 chr18 9600453 9600797 -77076751 + AluSx SINE Alu 1 344 0 2041 131 0 3 chr18 9601607 9601952 -77075596 + AluSx SINE Alu 1 344 0 4821 173 31 54 chr18 9602149 9603555 -77073993 - L1MD1 LINE L1 0 6636 5243 1036 169 105 5 chr18 9603555 9603774 -77073774 + L1MB3 LINE L1 5934 6174 -9 7167 220 50 26 chr18 9603781 9605621 -77071927 - L1MD1 LINE L1 -1284 5256 3360 2222 118 0 10 chr18 9605621 9605934 -77071614 - AluSx SINE Alu -2 310 1 7167 220 50 26 chr18 9605934 9606191 -77071357 - L1MD1 LINE L1 -3180 3360 3110 2361 81 13 0 chr18 9606197 9606495 -77071053 - AluSg SINE Alu -8 302 1 571 234 102 5 chr18 9606497 9606702 -77070846 - L1MD1 LINE L1 -4118 2422 2198 3730 164 47 21 chr18 9606719 9607427 -77070121 - L1MB3 LINE L1 -8 6175 5450 1498 152 11 0 chr18 9607629 9607892 -77069656 - L1MC3 LINE L1 -2 7783 7518 1281 206 45 15 chr18 9607903 9608296 -77069252 + MLT1C LTR MaLR 9 467 0 1701 178 73 60 chr18 9608296 9608694 -77068854 - L1MC3 LINE L1 -266 7519 7117 * 4640 229 94 67 chr18 9608689 9610822 -77066726 - L1MD1 LINE L1 -4303 2237 75 22 35 0 0 chr18 9610976 9611005 -77066543 + AT_rich Low_complexity Low_complexity 1 29 0 1909 116 11 0 chr18 9611006 9611274 -77066274 - L1PB1 LINE L1 -1 6150 5880 256 159 45 0 chr18 9611560 9611604 -77065944 - MER75 DNA T2_type 0 514 469 393 254 148 7 chr18 9611656 9611798 -77065750 - L1ME3A LINE L1 -20 6150 5989 339 91 0 0 chr18 9611823 9611867 -77065681 - L1PB1 LINE L1 -58 6093 6050 2058 188 60 11 chr18 9611935 9612402 -77065146 - L1MD2 LINE L1 0 6359 5870 2152 94 3 7 chr18 9612832 9613146 -77064402 + AluSq SINE Alu 1 313 0 2042 187 65 48 chr18 9614207 9614666 -77062882 + MLT1C LTR MaLR 1 467 0 1163 279 83 23 chr18 9615201 9615673 -77061875 + L1MC4a LINE L1 5466 5651 -527 2218 121 0 3 chr18 9615879 9616185 -77061363 + AluY SINE Alu 1 305 -6 355 280 8 83 chr18 9616356 9616488 -77061060 - MIR SINE MIR -78 184 63 3668 211 118 31 chr18 9616552 9617594 -77059954 + L1M4 LINE L1 46 1178 -5364 1802 100 0 13 chr18 9617594 9617833 -77059715 + AluSq SINE Alu 1 236 -77 368 192 29 19 chr18 9617833 9617937 -77059611 + L1MB2 LINE L1 6067 6171 0 1876 155 0 17 chr18 9618155 9618452 -77059096 + AluJo SINE Alu 3 294 -18 1519 107 0 81 chr18 9618466 9618700 -77058848 + AluSx SINE Alu 5 219 -93 230 320 62 98 chr18 9618732 9618957 -77058591 + L2 LINE L2 3017 3233 -39 784 261 96 4 chr18 9620937 9621167 -77056381 - MIR SINE MIR 0 262 12 192 40 0 0 chr18 9621218 9621243 -77056305 + (GA)n Simple_repeat Simple_repeat 2 26 0 225 237 158 0 chr18 9621912 9621988 -77055560 + MIR3 SINE MIR 107 194 -14 194 323 62 0 chr18 9622225 9622290 -77055258 + L2 LINE L2 3244 3312 -1 1907 155 28 0 chr18 9622324 9622614 -77054934 + AluJb SINE Alu 3 300 -12 913 249 65 0 chr18 9623254 9623499 -77054049 + MIR SINE MIR 2 262 0 1669 232 46 63 chr18 9625264 9625657 -77051891 + L1ME LINE L1 345 726 -5344 2325 91 0 0 chr18 9625657 9625953 -77051595 - AluY SINE Alu -15 296 1 1669 232 46 63 chr18 9625953 9626142 -77051406 + L1ME LINE L1 726 917 -5153 2081 120 3 7 chr18 9626508 9626808 -77050740 + AluSx SINE Alu 1 299 -13 338 283 203 11 chr18 9627343 9627520 -77050028 - MIR SINE MIR -13 249 39 26 50 0 0 chr18 9628083 9628123 -77049425 + AT_rich Low_complexity Low_complexity 1 40 0 3593 17 10 0 chr18 9631543 9631949 -77045599 - L1PA3 LINE L1 0 6155 5746 318 132 0 0 chr18 9632042 9632095 -77045453 + (CA)n Simple_repeat Simple_repeat 2 54 0 262 301 255 10 chr18 9633995 9634191 -77043357 - MIR SINE MIR -6 256 13 396 227 0 0 chr18 9634411 9634508 -77043040 - MIR SINE MIR 0 262 166 359 313 45 25 chr18 9635044 9635242 -77042306 + MIR SINE MIR 25 226 -36 180 77 0 0 chr18 9637592 9637618 -77039930 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 534 275 7 14 chr18 9638019 9638161 -77039387 + MIR SINE MIR 28 168 -94 2457 76 0 3 chr18 9638947 9639251 -77038297 + AluY SINE Alu 1 303 -8 22 0 0 0 chr18 9640243 9640265 -77037283 + AT_rich Low_complexity Low_complexity 1 22 0 2400 110 0 0 chr18 9640487 9640796 -77036752 + AluSq SINE Alu 2 310 -3 786 157 0 7 chr18 9641070 9641210 -77036338 - L1MB8 LINE L1 0 6178 6040 21 71 0 0 chr18 9642318 9642360 -77035188 + AT_rich Low_complexity Low_complexity 1 42 0 298 136 23 0 chr18 9644332 9644376 -77033172 - Alu SINE Alu -263 45 1 2308 89 0 3 chr18 9644451 9644744 -77032804 + AluSx SINE Alu 3 294 -18 1840 144 0 66 chr18 9645910 9646230 -77031318 + AluJo SINE Alu 1 299 -13 2343 70 0 7 chr18 9646411 9646719 -77030829 - AluY SINE Alu 0 306 1 1860 161 0 32 chr18 9646841 9647151 -77030397 - AluJo SINE Alu -12 300 1 21 0 0 0 chr18 9647160 9647181 -77030367 + AT_rich Low_complexity Low_complexity 1 21 0 579 325 60 5 chr18 9647696 9647896 -77029652 - MIR SINE MIR -6 256 46 1744 138 135 12 chr18 9648431 9648765 -77028783 + THE1C LTR MaLR 1 375 0 24 77 0 0 chr18 9649371 9649423 -77028125 + AT_rich Low_complexity Low_complexity 1 52 0 2251 98 0 3 chr18 9649625 9649920 -77027628 + AluSx SINE Alu 1 294 -18 1093 161 12 86 chr18 9650272 9650596 -77026952 + AluY SINE Alu 2 301 0 1563 96 9 22 chr18 9651680 9651909 -77025639 + AluSq SINE Alu 83 308 -5 2143 130 0 10 chr18 9651967 9652266 -77025282 - AluSx SINE Alu -12 300 5 343 88 176 0 chr18 9652412 9652480 -77025068 + L1MB3 LINE L1 6104 6183 0 356 242 86 8 chr18 9653066 9653194 -77024354 + L1MB8 LINE L1 3742 3879 -2267 666 241 60 5 chr18 9653231 9653430 -77024118 - L1M4 LINE L1 -1742 4404 4195 2307 75 31 3 chr18 9653452 9653744 -77023804 - AluSc SINE Alu -9 300 1 578 178 0 25 chr18 9654551 9654669 -77022879 + L1MB8 LINE L1 6064 6178 0 6530 60 23 14 chr18 9655301 9656157 -77021391 + SVA Other Other 523 1386 0 2698 191 102 48 chr18 9656165 9656446 -77021102 + L1MB8 LINE L1 4942 5206 -972 2546 69 0 3 chr18 9656446 9656752 -77020796 + AluY SINE Alu 1 305 -6 2698 191 102 48 chr18 9656752 9657397 -77020151 + L1MB8 LINE L1 5206 5950 -228 1996 121 0 49 chr18 9657397 9657703 -77019845 + AluSq SINE Alu 1 291 -22 2698 191 102 48 chr18 9657703 9657944 -77019604 + L1MB8 LINE L1 5950 6176 -2 1810 162 3 35 chr18 9658332 9658647 -77018901 - AluJo SINE Alu -7 305 1 2374 59 41 0 chr18 9659805 9660095 -77017453 + AluY SINE Alu 1 302 -9 2187 101 0 39 chr18 9660194 9660501 -77017047 + AluSx SINE Alu 1 295 -17 2250 103 7 0 chr18 9660644 9660946 -77016602 - AluSg SINE Alu -6 304 1 292 258 165 21 chr18 9660989 9661086 -77016462 - L2 LINE L2 0 3313 3203 2037 116 7 7 chr18 9661826 9662157 -77015391 + AluSx SINE Alu 1 331 0 488 231 90 64 chr18 9662987 9663032 -77014516 + MER5B DNA MER1_type 2 44 -134 2378 81 0 7 chr18 9663032 9663329 -77014219 - AluSc SINE Alu -14 295 1 488 231 90 64 chr18 9663329 9663439 -77014109 + MER5B DNA MER1_type 44 161 -17 2437 71 0 0 chr18 9663791 9664087 -77013461 - AluY SINE Alu -15 296 1 189 107 0 0 chr18 9664278 9664306 -77013242 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2547 63 0 0 chr18 9664411 9664713 -77012835 + AluY SINE Alu 10 311 0 2141 109 0 26 chr18 9664734 9665037 -77012511 + AluSg SINE Alu 10 304 -6 2069 107 73 0 chr18 9665048 9665337 -77012211 + AluSq SINE Alu 1 310 -3 2241 82 3 43 chr18 9666571 9666875 -77010673 + AluSg SINE Alu 1 292 -18 2120 132 3 0 chr18 9667209 9667512 -77010036 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr18 9668723 9668753 -77008795 + AT_rich Low_complexity Low_complexity 1 30 0 239 114 23 0 chr18 9669265 9669309 -77008239 + (TA)n Simple_repeat Simple_repeat 2 46 0 2378 75 7 0 chr18 9669311 9669604 -77007944 - AluSp SINE Alu -18 295 1 2610 49 0 3 chr18 9670464 9670769 -77006779 + AluY SINE Alu 1 304 -7 404 295 170 15 chr18 9670888 9671088 -77006460 - MIR SINE MIR 0 262 32 519 257 70 0 chr18 9671192 9671363 -77006185 - MIR SINE MIR -15 247 65 1904 75 44 48 chr18 9672358 9672651 -77004897 + AluSg SINE Alu 1 292 -18 392 86 74 0 chr18 9673442 9673523 -77004025 + CT-rich Low_complexity Low_complexity 1 87 0 22 35 0 0 chr18 9673970 9673999 -77003549 + GC_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr18 9674265 9674298 -77003250 + GC_rich Low_complexity Low_complexity 1 33 0 222 37 0 0 chr18 9674543 9674570 -77002978 + (CCCCG)n Simple_repeat Simple_repeat 4 30 0 26 0 0 0 chr18 9675073 9675099 -77002449 + AT_rich Low_complexity Low_complexity 1 26 0 2371 78 0 10 chr18 9675168 9675464 -77002084 + AluSx SINE Alu 5 297 -15 2408 54 0 10 chr18 9676139 9676435 -77001113 + AluY SINE Alu 9 301 -10 2284 101 0 0 chr18 9677141 9677428 -77000120 + AluSq SINE Alu 1 287 -26 25 0 0 0 chr18 9677428 9677453 -77000095 + AT_rich Low_complexity Low_complexity 1 25 0 255 181 347 0 chr18 9677601 9677673 -76999875 + MIR SINE MIR 71 167 -95 * 333 299 82 20 chr18 9677668 9677815 -76999733 - L2 LINE L2 -1 3271 3116 2376 83 0 0 chr18 9677923 9678223 -76999325 + AluY SINE Alu 1 300 -11 213 295 26 0 chr18 9678223 9678301 -76999247 + MIR SINE MIR 169 248 -14 1384 140 6 125 chr18 9678311 9678632 -76998916 - AluJb SINE Alu 0 312 28 23 33 0 0 chr18 9678664 9678694 -76998854 + AT_rich Low_complexity Low_complexity 1 30 0 405 216 29 10 chr18 9678782 9678884 -76998664 - MER5A DNA MER1_type -76 113 10 709 224 12 6 chr18 9678906 9679076 -76998472 - MER5B DNA MER1_type -5 173 3 1840 207 41 64 chr18 9679601 9680117 -76997431 + MLT1D LTR MaLR 2 505 0 1780 192 14 32 chr18 9680582 9680952 -76996596 - MLT1A2 LTR MaLR 0 374 12 334 200 0 0 chr18 9680948 9681008 -76996540 - AluSp SINE Alu -107 196 137 * 433 279 56 84 chr18 9681143 9681394 -76996154 + MIR SINE MIR 13 256 -6 1805 117 18 18 chr18 9681940 9682214 -76995334 - AluSg SINE Alu 0 310 37 2346 99 0 0 chr18 9682354 9682658 -76994890 - AluY SINE Alu -7 304 1 2201 107 14 0 chr18 9682658 9682947 -76994601 - AluSg SINE Alu -17 293 1 280 348 0 18 chr18 9683295 9683407 -76994141 + MIR SINE MIR 34 143 -65 1722 149 53 3 chr18 9683444 9683726 -76993822 + AluSx SINE Alu 1 296 -16 354 272 96 0 chr18 9683875 9684011 -76993537 + L2 LINE L2 1154 1302 -2012 286 237 54 11 chr18 9684066 9684159 -76993389 + L2 LINE L2 2965 3061 -211 2006 113 46 36 chr18 9685819 9685977 -76991571 - AluSx SINE Alu -7 305 141 2446 60 0 13 chr18 9685977 9686278 -76991270 - AluY SINE Alu -14 297 1 2006 113 46 36 chr18 9686278 9686421 -76991127 - AluSx SINE Alu -171 141 1 23 0 0 0 chr18 9686459 9686482 -76991066 + AT_rich Low_complexity Low_complexity 1 23 0 2179 92 27 7 chr18 9687182 9687477 -76990071 - AluSq SINE Alu -12 301 1 213 370 0 0 chr18 9687490 9687571 -76989977 - MIR SINE MIR -111 151 71 644 232 18 30 chr18 9687582 9687746 -76989802 - MLT1I LTR MaLR -15 534 373 330 264 40 8 chr18 9687966 9688091 -76989457 - MIR SINE MIR -19 243 115 1011 256 158 14 chr18 9688419 9688767 -76988781 - MLT1I LTR MaLR -11 398 1 353 311 10 10 chr18 9690412 9690515 -76987033 + MLT1L LTR MaLR 95 197 -418 780 253 45 8 chr18 9690541 9690786 -76986762 - L1ME1 LINE L1 -6 6160 5907 2084 91 58 0 chr18 9691005 9691279 -76986269 - AluSp SINE Alu -22 291 2 2237 112 0 0 chr18 9691284 9691579 -76985969 - AluSx SINE Alu -17 295 1 180 0 0 0 chr18 9692672 9692692 -76984856 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1103 226 187 16 chr18 9692692 9693072 -76984476 - L1ME1 LINE L1 -251 5915 5471 1116 109 38 16 chr18 9693072 9693242 -76984306 - AluSc SINE Alu -3 306 130 2677 48 0 10 chr18 9693242 9693556 -76983992 - AluY SINE Alu 0 311 1 1116 109 38 16 chr18 9693556 9693569 -76983979 - AluSc SINE Alu -179 130 119 2212 101 10 7 chr18 9693798 9694106 -76983442 + AluSc SINE Alu 1 309 0 686 262 45 55 chr18 9695652 9695942 -76981606 + L1ME2 LINE L1 5868 6154 -10 1019 103 0 0 chr18 9696060 9696196 -76981352 + L1P4 LINE L1 5435 5570 -596 413 153 0 0 chr18 9696196 9696268 -76981280 + AluS SINE Alu 232 303 -9 28 0 0 0 chr18 9697097 9697125 -76980423 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 9697457 9697485 -76980063 + AT_rich Low_complexity Low_complexity 1 28 0 2342 82 14 0 chr18 9698285 9698577 -76978971 - AluSx SINE Alu -16 296 1 2390 93 3 10 chr18 9698880 9699191 -76978357 + AluSx SINE Alu 1 309 -3 254 146 0 0 chr18 9699250 9699298 -76978250 - AluSp/q SINE Alu -5 298 251 2513 71 0 3 chr18 9700499 9700809 -76976739 - AluY SINE Alu -2 309 1 237 357 23 23 chr18 9701184 9701313 -76976235 - L2 LINE L2 -10 3262 3134 326 211 218 8 chr18 9701846 9701979 -76975569 + MIR3 SINE MIR 47 207 -1 283 338 130 5 chr18 9702811 9703027 -76974521 + MIR SINE MIR 20 262 0 30 27 0 0 chr18 9703578 9703615 -76973933 + AT_rich Low_complexity Low_complexity 1 37 0 1704 163 10 24 chr18 9703615 9703910 -76973638 - AluJo SINE Alu -18 294 4 895 178 25 0 chr18 9703952 9704115 -76973433 + FRAM SINE Alu 1 167 -9 1702 139 15 11 chr18 9704189 9704463 -76973085 + AluSq SINE Alu 1 275 -38 358 202 10 10 chr18 9705733 9705837 -76971711 + GA-rich Low_complexity Low_complexity 1 104 0 434 231 48 0 chr18 9706777 9706881 -76970667 + MER45A DNA AcHobo 70 178 0 426 295 51 26 chr18 9707349 9707444 -76970104 + L2 LINE L2 1784 1875 -1439 2157 95 34 7 chr18 9707444 9707740 -76969808 + AluSc SINE Alu 1 304 -5 426 295 51 26 chr18 9707740 9707878 -76969670 + L2 LINE L2 1875 2023 -1291 2417 52 7 0 chr18 9708226 9708514 -76969034 + AluY SINE Alu 1 290 -21 1830 159 7 7 chr18 9708866 9709168 -76968380 - AluSx SINE Alu -10 302 1 332 182 20 50 chr18 9709192 9709291 -76968257 - MER5A DNA MER1_type -55 134 39 1818 82 0 25 chr18 9709295 9709540 -76968008 + AluY SINE Alu 65 303 -8 887 179 20 56 chr18 9709939 9710191 -76967357 + L1M4 LINE L1 4396 4638 -1508 330 26 0 0 chr18 9710211 9710250 -76967298 + (TC)n Simple_repeat Simple_repeat 1 39 0 2237 92 3 3 chr18 9710879 9711173 -76966375 + AluSg SINE Alu 1 294 -16 1375 206 87 0 chr18 9711486 9711738 -76965810 + AluJb SINE Alu 1 274 -38 192 40 0 0 chr18 9711739 9711764 -76965784 + (TC)n Simple_repeat Simple_repeat 1 25 0 331 305 18 24 chr18 9711817 9711981 -76965567 + L1M4 LINE L1 17 179 -6363 3215 192 95 58 chr18 9712379 9712914 -76964634 + L1MB8 LINE L1 4398 4912 -1266 10253 28 8 172 chr18 9712914 9714572 -76962976 + SVA Other Other 1 1386 0 3215 192 95 58 chr18 9714572 9714861 -76962687 + L1MB8 LINE L1 4912 5189 -989 2546 69 0 3 chr18 9714861 9715167 -76962381 + AluY SINE Alu 1 305 -6 3215 192 95 58 chr18 9715167 9715812 -76961736 + L1MB8 LINE L1 5189 5945 -233 1996 121 0 49 chr18 9715812 9716118 -76961430 + AluSq SINE Alu 1 291 -22 3215 192 95 58 chr18 9716118 9716359 -76961189 + L1MB8 LINE L1 5945 6176 -2 1810 162 3 35 chr18 9716747 9717062 -76960486 - AluJo SINE Alu -7 305 1 2374 59 41 0 chr18 9718220 9718510 -76959038 + AluY SINE Alu 1 302 -9 2187 101 0 39 chr18 9718609 9718916 -76958632 + AluSx SINE Alu 1 295 -17 2250 103 7 0 chr18 9719059 9719361 -76958187 - AluSg SINE Alu -6 304 1 292 258 165 21 chr18 9719404 9719501 -76958047 - L2 LINE L2 0 3313 3203 2037 116 7 7 chr18 9720241 9720572 -76956976 + AluSx SINE Alu 1 331 0 488 231 90 64 chr18 9721402 9721447 -76956101 + MER5B DNA MER1_type 2 44 -134 2378 81 0 7 chr18 9721447 9721744 -76955804 - AluSc SINE Alu -14 295 1 488 231 90 64 chr18 9721744 9721854 -76955694 + MER5B DNA MER1_type 44 161 -17 2468 68 0 0 chr18 9722206 9722502 -76955046 - AluY SINE Alu -15 296 1 189 107 0 0 chr18 9722693 9722721 -76954827 + (TGAA)n Simple_repeat Simple_repeat 4 31 0 2547 63 0 0 chr18 9722826 9723128 -76954420 + AluY SINE Alu 10 311 0 2141 109 0 26 chr18 9723149 9723452 -76954096 + AluSg SINE Alu 10 304 -6 2069 107 73 0 chr18 9723463 9723752 -76953796 + AluSq SINE Alu 1 310 -3 2206 82 3 46 chr18 9724986 9725291 -76952257 + AluSg SINE Alu 1 292 -18 2120 132 3 0 chr18 9725625 9725928 -76951620 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr18 9727139 9727169 -76950379 + AT_rich Low_complexity Low_complexity 1 30 0 239 114 23 0 chr18 9727681 9727725 -76949823 + (TA)n Simple_repeat Simple_repeat 2 46 0 2378 75 7 0 chr18 9727727 9728020 -76949528 - AluSp SINE Alu -18 295 1 2610 49 0 3 chr18 9728880 9729185 -76948363 + AluY SINE Alu 1 304 -7 480 311 160 14 chr18 9729304 9729523 -76948025 - MIR SINE MIR 0 262 12 593 257 70 0 chr18 9729608 9729779 -76947769 - MIR SINE MIR -15 247 65 1764 72 48 48 chr18 9730774 9731066 -76946482 + AluSg SINE Alu 1 292 -18 392 86 74 0 chr18 9731857 9731938 -76945610 + CT-rich Low_complexity Low_complexity 1 87 0 26 30 0 0 chr18 9732678 9732711 -76944837 + GC_rich Low_complexity Low_complexity 1 33 0 222 37 0 0 chr18 9732956 9732983 -76944565 + (CCCCG)n Simple_repeat Simple_repeat 4 30 0 26 0 0 0 chr18 9733486 9733512 -76944036 + AT_rich Low_complexity Low_complexity 1 26 0 2242 78 0 10 chr18 9733581 9733877 -76943671 + AluSx SINE Alu 5 297 -15 2282 54 0 10 chr18 9734552 9734848 -76942700 + AluY SINE Alu 9 301 -10 421 291 100 73 chr18 9735316 9735554 -76941994 + L1ME4a LINE L1 5685 5936 -185 2155 101 0 0 chr18 9735554 9735841 -76941707 + AluSq SINE Alu 1 287 -26 421 291 100 73 chr18 9735841 9735942 -76941606 + L1ME4a LINE L1 5936 6033 -88 298 280 256 0 chr18 9735961 9736086 -76941462 + MIR SINE MIR 11 167 -95 * 382 299 82 20 chr18 9736081 9736228 -76941320 - L2 LINE L2 -1 3271 3116 2254 83 0 0 chr18 9736336 9736636 -76940912 + AluY SINE Alu 1 300 -11 249 295 26 0 chr18 9736636 9736714 -76940834 + MIR SINE MIR 169 248 -14 1277 140 6 125 chr18 9736724 9737045 -76940503 - AluJb SINE Alu -2 310 28 23 33 0 0 chr18 9737077 9737107 -76940441 + AT_rich Low_complexity Low_complexity 1 30 0 448 216 29 10 chr18 9737195 9737297 -76940251 - MER5A DNA MER1_type -76 113 10 779 224 12 6 chr18 9737319 9737489 -76940059 - MER5B DNA MER1_type -5 173 3 1837 207 41 64 chr18 9738014 9738530 -76939018 + MLT1D LTR MaLR 2 505 0 1757 195 14 32 chr18 9738995 9739365 -76938183 - MLT1A2 LTR MaLR 0 374 12 311 186 17 0 chr18 9739361 9739420 -76938128 - AluSp SINE Alu -107 196 137 * 521 279 56 84 chr18 9739555 9739806 -76937742 + MIR SINE MIR 13 256 -6 1696 117 18 18 chr18 9740352 9740626 -76936922 - AluSg SINE Alu 0 310 37 2079 106 7 0 chr18 9740766 9741068 -76936480 - AluY SINE Alu -7 304 1 2076 107 14 0 chr18 9741068 9741357 -76936191 - AluSg SINE Alu -17 293 1 319 348 0 18 chr18 9741705 9741817 -76935731 + MIR SINE MIR 34 143 -65 1609 149 53 3 chr18 9741854 9742136 -76935412 + AluSx SINE Alu 1 296 -16 409 272 96 0 chr18 9742285 9742421 -76935127 + L2 LINE L2 1154 1302 -2012 316 283 17 25 chr18 9742449 9742569 -76934979 + L2 LINE L2 2943 3061 -211 193 327 0 0 chr18 9742777 9742832 -76934716 - MIR SINE MIR -18 244 190 1884 113 46 36 chr18 9744229 9744387 -76933161 - AluSx SINE Alu -7 305 141 2313 60 0 13 chr18 9744387 9744688 -76932860 - AluY SINE Alu -14 297 1 1884 113 46 36 chr18 9744688 9744831 -76932717 - AluSx SINE Alu -171 141 1 23 0 0 0 chr18 9744869 9744892 -76932656 + AT_rich Low_complexity Low_complexity 1 23 0 269 342 45 26 chr18 9745532 9745592 -76931956 - MIR SINE MIR -34 228 171 2051 92 27 7 chr18 9745592 9745887 -76931661 - AluSq SINE Alu -12 301 1 269 342 45 26 chr18 9745887 9745981 -76931567 - MIR SINE MIR -91 171 71 650 232 18 30 chr18 9745992 9746156 -76931392 - MLT1I LTR MaLR -15 534 373 407 294 33 13 chr18 9746376 9746529 -76931019 - MIR SINE MIR -19 243 88 1018 256 158 14 chr18 9746829 9747177 -76930371 - MLT1I LTR MaLR -11 398 1 353 311 10 10 chr18 9748822 9748925 -76928623 + MLT1L LTR MaLR 95 197 -418 774 253 45 8 chr18 9748951 9749196 -76928352 - L1ME1 LINE L1 -6 6160 5907 1960 91 58 0 chr18 9749415 9749689 -76927859 - AluSp SINE Alu -22 291 2 2114 112 0 0 chr18 9749694 9749989 -76927559 - AluSx SINE Alu -17 295 1 180 0 0 0 chr18 9751082 9751102 -76926446 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 1612 182 89 95 chr18 9751102 9751482 -76926066 - L1ME1 LINE L1 -251 5915 5510 1940 110 23 23 chr18 9751482 9751652 -76925896 - AluSx SINE Alu -3 309 137 2597 29 0 10 chr18 9751652 9751966 -76925582 - AluY SINE Alu 0 311 1 1940 110 23 23 chr18 9751966 9752104 -76925444 - AluSx SINE Alu -174 138 1 1612 182 89 95 chr18 9752104 9752437 -76925111 - L1ME1 LINE L1 -656 5510 5176 1968 124 0 0 chr18 9752437 9752740 -76924808 - AluSx SINE Alu 0 303 1 2951 167 13 54 chr18 9752763 9753237 -76924311 - L1MC3 LINE L1 -21 7764 7272 252 0 0 0 chr18 9753237 9753265 -76924283 + (CA)n Simple_repeat Simple_repeat 1 28 0 2951 167 13 54 chr18 9753265 9753295 -76924253 - L1MC3 LINE L1 -513 7272 7242 2336 91 0 0 chr18 9753295 9753604 -76923944 - AluSc SINE Alu 0 309 1 2951 167 13 54 chr18 9753604 9753727 -76923821 - L1MC3 LINE L1 -543 7242 7162 760 131 10 30 chr18 9753729 9753879 -76923669 + MSTC LTR MaLR 1 150 -215 1911 112 0 39 chr18 9753886 9754021 -76923527 + AluSq SINE Alu 1 140 -173 2242 67 0 51 chr18 9754021 9754336 -76923212 + AluY SINE Alu 1 299 -12 1911 112 0 39 chr18 9754336 9754505 -76923043 + AluSq SINE Alu 140 293 -20 501 237 40 7 chr18 9754589 9754741 -76922807 + L1M4 LINE L1 3880 4036 -2110 750 199 13 13 chr18 9754749 9754900 -76922648 - MLT1A1 LTR MaLR 0 365 215 2342 281 77 27 chr18 9754912 9755386 -76922162 - L1MEc LINE L1 -2311 3904 3455 2072 118 3 0 chr18 9755386 9755691 -76921857 - AluSq SINE Alu -7 306 1 1964 135 0 0 chr18 9755692 9755995 -76921553 - AluSx SINE Alu -7 305 3 2342 281 77 27 chr18 9755995 9758591 -76918957 - L1MEc LINE L1 -2759 3456 625 896 241 148 0 chr18 9758650 9758920 -76918628 + MLT1L LTR MaLR 306 615 0 2096 110 3 3 chr18 9758988 9759287 -76918261 - AluSx SINE Alu -8 304 6 204 283 131 10 chr18 9759892 9759991 -76917557 + MIR SINE MIR 38 148 -60 535 349 11 31 chr18 9760192 9760453 -76917095 + MIR SINE MIR 7 262 0 6924 57 282 0 chr18 9760468 9761546 -76916002 + SVA Other Other 3 1384 -2 1979 90 66 0 chr18 9762817 9763105 -76914443 + AluSq SINE Alu 1 307 -6 1158 80 145 0 chr18 9763520 9763699 -76913849 + LTR12 LTR ERV1 1 189 -525 1565 180 3 18 chr18 9763700 9763983 -76913565 - AluJo SINE Alu -33 279 1 2144 145 73 57 chr18 9764082 9764536 -76913012 - LOR1b LTR ERV1 0 461 1 2268 94 3 0 chr18 9764563 9764862 -76912686 + AluSp SINE Alu 1 300 -13 2064 155 28 6 chr18 9764979 9765334 -76912214 + MLT1A1 LTR MaLR 1 363 -2 2217 84 20 0 chr18 9765358 9765655 -76911893 + AluSc SINE Alu 1 303 -6 220 311 167 41 chr18 9766506 9766991 -76910557 + L2 LINE L2 1965 2510 -804 525 200 14 7 chr18 9767009 9767064 -76910484 + CT-rich Low_complexity Low_complexity 4 57 -92 2284 94 0 0 chr18 9767064 9767373 -76910175 - AluSc SINE Alu 0 309 1 525 200 14 7 chr18 9767373 9767462 -76910086 + CT-rich Low_complexity Low_complexity 57 149 0 1164 225 64 31 chr18 9767615 9767934 -76909614 + L1ME1 LINE L1 5830 6159 -7 2409 66 0 0 chr18 9768522 9768827 -76908721 + AluY SINE Alu 1 305 -6 2027 80 33 17 chr18 9769342 9769641 -76907907 - AluSx SINE Alu -8 304 1 270 56 0 0 chr18 9769668 9769704 -76907844 + (TG)n Simple_repeat Simple_repeat 2 37 0 1962 102 0 71 chr18 9769777 9770099 -76907449 + AluSq SINE Alu 1 299 -14 2234 104 7 0 chr18 9770100 9770407 -76907141 + AluSc SINE Alu 1 309 0 2093 91 0 20 chr18 9771395 9771693 -76905855 + AluSg SINE Alu 2 293 -17 1848 249 105 20 chr18 9772021 9772660 -76904888 + L1MEc LINE L1 100 792 -5604 1416 227 21 56 chr18 9772654 9773138 -76904410 + L1ME1 LINE L1 5695 6161 -5 * 2489 68 0 0 chr18 9773140 9773449 -76904099 - AluY SINE Alu -2 309 1 279 245 58 108 chr18 9773619 9773758 -76903790 - MIR3 SINE MIR -68 140 9 1960 99 67 0 chr18 9774851 9775134 -76902414 - AluSq SINE Alu -11 302 1 259 172 62 31 chr18 9775301 9775365 -76902183 - L1ME3A LINE L1 -221 5949 5884 708 54 33 0 chr18 9775368 9775460 -76902088 - AluY SINE Alu -14 297 203 1622 62 9 5 chr18 9775464 9775674 -76901874 + AluY SINE Alu 92 302 -9 309 286 45 23 chr18 9775777 9775910 -76901638 - L1MEc LINE L1 -3426 2789 2654 1629 134 10 35 chr18 9776067 9776357 -76901191 - L1MA7 LINE L1 -428 5863 5581 1749 179 32 29 chr18 9776359 9776767 -76900781 + L1MA7 LINE L1 5883 6291 0 2004 89 18 61 chr18 9776806 9777133 -76900415 + AluSq SINE Alu 1 313 0 2104 103 7 0 chr18 9777159 9777451 -76900097 + AluSp SINE Alu 1 294 -19 2202 92 7 0 chr18 9778787 9779080 -76898468 + AluSg SINE Alu 1 295 -15 645 281 156 31 chr18 9779299 9779913 -76897635 + L2 LINE L2 2352 3047 -225 1320 232 21 57 chr18 9780240 9780714 -76896834 - L1ME1 LINE L1 -15 6151 5695 * 1477 273 41 20 chr18 9780708 9781199 -76896349 - L1MEc LINE L1 -5604 792 292 560 205 39 0 chr18 9781220 9781347 -76896201 - L1MEc LINE L1 -6165 231 100 2161 100 0 20 chr18 9781676 9781975 -76895573 - AluSg SINE Alu -17 293 1 2383 101 7 0 chr18 9782964 9783271 -76894277 - AluSc SINE Alu 0 309 1 2049 100 0 69 chr18 9783272 9783591 -76893957 - AluY SINE Alu -14 297 1 1180 225 64 31 chr18 9784179 9784498 -76893050 - L1ME1 LINE L1 -7 6159 5830 510 199 14 7 chr18 9784651 9784736 -76892812 + GA-rich Low_complexity Low_complexity 4 92 -53 2412 94 0 0 chr18 9784736 9785045 -76892503 + AluSc SINE Alu 1 309 0 510 199 14 7 chr18 9785045 9785100 -76892448 + GA-rich Low_complexity Low_complexity 92 145 0 2489 76 16 0 chr18 9786458 9786762 -76890786 - AluSc SINE Alu 0 309 1 2057 155 28 6 chr18 9786786 9787141 -76890407 - MLT1A1 LTR MaLR -2 363 1 2412 90 3 0 chr18 9787258 9787559 -76889989 - AluSp SINE Alu -11 302 1 2119 148 73 57 chr18 9787586 9788040 -76889508 + LOR1b LTR ERV1 1 461 0 1678 180 3 18 chr18 9788139 9788422 -76889126 + AluJo SINE Alu 1 279 -33 1152 80 145 0 chr18 9788423 9788602 -76888946 - LTR12 LTR ERV1 -525 189 1 2072 92 67 0 chr18 9789017 9789301 -76888247 - AluSq SINE Alu -10 303 1 7445 55 282 0 chr18 9790572 9791650 -76885898 - SVA Other Other -2 1384 3 429 349 11 31 chr18 9791665 9791926 -76885622 - MIR SINE MIR 0 262 7 526 202 6 22 chr18 9793213 9793391 -76884157 + CT-rich Low_complexity Low_complexity 2 176 0 2272 112 0 10 chr18 9794324 9794638 -76882910 - AluY SINE Alu 0 311 1 211 139 28 0 chr18 9795129 9795165 -76882383 + CT-rich Low_complexity Low_complexity 5 41 0 287 341 60 24 chr18 9795472 9795639 -76881909 + MIR3 SINE MIR 21 193 -15 315 238 0 0 chr18 9795862 9795946 -76881602 - MER69 DNA AcHobo -832 1694 1611 2264 108 0 3 chr18 9795955 9796251 -76881297 - AluSg SINE Alu -15 295 1 1088 192 43 122 chr18 9796261 9796426 -76881122 - L1MD3 LINE L1 0 8040 7864 2109 102 7 10 chr18 9796426 9796721 -76880827 + AluSx SINE Alu 1 294 -18 1088 192 43 122 chr18 9796721 9797087 -76880461 - L1MD3 LINE L1 -176 7864 7567 418 162 20 149 chr18 9797090 9797238 -76880310 - MER69 DNA AcHobo -942 1584 1456 2270 93 35 0 chr18 9797243 9797533 -76880015 + AluSq SINE Alu 5 304 -9 1466 276 74 10 chr18 9797601 9797727 -76879821 - MER69 DNA AcHobo -1820 706 589 1033 239 66 92 chr18 9797727 9798063 -76879485 - MLT1H LTR MaLR 0 549 206 1373 169 74 57 chr18 9798063 9798160 -76879388 + AluJo SINE Alu 1 95 -217 2350 96 0 0 chr18 9798160 9798463 -76879085 + AluSc SINE Alu 1 303 -6 2106 101 0 64 chr18 9798463 9798790 -76878758 + AluSg SINE Alu 1 307 -3 1373 169 74 57 chr18 9798790 9798987 -76878561 + AluJo SINE Alu 94 301 -11 1033 239 66 92 chr18 9798987 9799214 -76878334 - MLT1H LTR MaLR -343 206 1 1466 276 74 10 chr18 9799214 9799703 -76877845 - MER69 DNA AcHobo -1937 589 1 1692 192 0 10 chr18 9800564 9800876 -76876672 - AluJo SINE Alu -3 309 1 2122 98 36 0 chr18 9801573 9801876 -76875672 - AluSq SINE Alu 0 313 1 193 273 0 0 chr18 9802106 9802150 -76875398 + L2 LINE L2 3225 3268 -4 196 281 18 0 chr18 9802756 9802813 -76874735 - MIR SINE MIR -132 130 73 380 241 269 0 chr18 9802865 9803006 -76874542 - MIR SINE MIR -26 236 58 4854 140 36 16 chr18 9803035 9803175 -76874373 - L1MA6 LINE L1 0 6482 6346 2155 109 0 10 chr18 9803175 9803469 -76874079 - AluSg SINE Alu -19 291 1 4854 140 36 16 chr18 9803469 9804184 -76873364 - L1MA6 LINE L1 -136 6346 5610 1360 105 0 0 chr18 9804213 9804385 -76873163 - AluSx SINE Alu -103 209 38 8537 163 28 29 chr18 9804388 9805181 -76872367 - L1MA6 LINE L1 -743 5585 4792 2290 90 0 13 chr18 9805181 9805480 -76872068 + AluSg SINE Alu 1 295 -15 8537 163 28 29 chr18 9805480 9806469 -76871079 - L1MA6 LINE L1 -1536 4792 3852 4679 247 38 36 chr18 9806444 9807314 -76870234 - L1MA6 LINE L1 -4044 2284 1417 * 2288 118 3 3 chr18 9807314 9807627 -76869921 - AluSq SINE Alu 0 313 1 4679 247 38 36 chr18 9807627 9807685 -76869863 - L1MA6 LINE L1 -4911 1417 1361 2280 98 9 29 chr18 9807685 9808000 -76869548 - AluSc SINE Alu 0 309 1 2502 79 0 3 chr18 9808000 9808303 -76869245 - AluY SINE Alu -9 302 1 4679 247 38 36 chr18 9808303 9809110 -76868438 - L1MA6 LINE L1 -4966 1362 557 228 259 89 30 chr18 9809156 9809291 -76868257 - L1M3a LINE L1 -5175 780 638 189 0 0 0 chr18 9810696 9810717 -76866831 + (TA)n Simple_repeat Simple_repeat 2 22 0 2161 112 10 0 chr18 9810717 9811012 -76866536 - AluSx SINE Alu -13 299 2 951 198 50 5 chr18 9811019 9811221 -76866327 - MER20 DNA MER1_type -1 218 8 192 211 105 66 chr18 9811306 9811382 -76866166 - L2 LINE L2 -253 3060 2982 294 188 50 25 chr18 9811697 9811777 -76865771 - MIR SINE MIR -54 208 127 567 174 0 0 chr18 9811824 9811922 -76865626 - AluSc SINE Alu 0 309 212 233 243 0 40 chr18 9812186 9812260 -76865288 - L2 LINE L2 -1 3312 3242 660 261 20 57 chr18 9812594 9812672 -76864876 - MIR SINE MIR -25 237 158 2039 103 33 4 chr18 9812672 9812970 -76864578 - AluSc SINE Alu 0 306 1 660 261 20 57 chr18 9812970 9813135 -76864413 - MIR SINE MIR -104 158 2 330 329 46 19 chr18 9813245 9813450 -76864098 + MIR SINE MIR 16 229 -33 21 0 0 0 chr18 9814017 9814038 -76863510 + AT_rich Low_complexity Low_complexity 1 21 0 24 24 0 24 chr18 9814130 9814156 -76863392 + AT_rich Low_complexity Low_complexity 1 27 -14 1697 160 21 14 chr18 9814156 9814438 -76863110 - AluJb SINE Alu -28 284 1 24 24 0 24 chr18 9814438 9814453 -76863095 + AT_rich Low_complexity Low_complexity 27 41 0 2084 110 7 4 chr18 9815463 9815771 -76861777 - AluSx SINE Alu 0 309 1 383 275 43 97 chr18 9815918 9816176 -76861372 + MIR SINE MIR 14 257 -5 1039 117 111 6 chr18 9816919 9817090 -76860458 - MLT1B LTR MaLR 0 390 202 402 167 10 108 chr18 9817085 9817187 -76860361 - MLT1B LTR MaLR -298 92 1 * 1665 116 12 16 chr18 9817248 9817490 -76860058 + AluSq SINE Alu 41 281 -32 247 45 68 0 chr18 9817492 9817536 -76860012 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 200 200 0 0 chr18 9817536 9817571 -76859977 + GA-rich Low_complexity Low_complexity 2 36 0 190 214 71 71 chr18 9819760 9819816 -76857732 - L2 LINE L2 -8 3264 3209 2331 110 0 0 chr18 9823811 9824110 -76853438 - AluSx SINE Alu -11 301 3 255 261 142 22 chr18 9824951 9825085 -76852463 - MER5B DNA MER1_type 0 178 29 193 364 25 8 chr18 9825251 9825369 -76852179 + MER5A DNA MER1_type 37 156 -33 187 195 312 39 chr18 9825595 9825672 -76851876 + MIR3 SINE MIR 102 199 -9 2444 59 7 10 chr18 9826764 9827070 -76850478 - AluY SINE Alu -6 305 1 1488 123 5 5 chr18 9827252 9827463 -76850085 + AluSg/x SINE Alu 85 295 -15 2807 213 27 24 chr18 9827562 9828159 -76849389 + MER77 LTR ERV1 1 599 -6 2211 128 73 14 chr18 9828400 9828744 -76848804 - THE1B LTR MaLR 0 364 1 2580 14 0 0 chr18 9829057 9829333 -76848215 - AluYa5 SINE Alu -2 309 34 649 289 90 37 chr18 9829422 9829582 -76847966 - L2 LINE L2 -129 3184 3034 2260 97 7 3 chr18 9829582 9829881 -76847667 + AluSp SINE Alu 1 300 -13 649 289 90 37 chr18 9829881 9830153 -76847395 - L2 LINE L2 -279 3034 2728 322 146 18 0 chr18 9830134 9830189 -76847359 - L2 LINE L2 -1037 2277 2222 * 298 287 121 39 chr18 9831546 9831919 -76845629 + L2 LINE L2 2646 3047 -225 192 306 36 36 chr18 9832063 9832174 -76845374 + L2 LINE L2 3195 3305 -8 2224 84 7 24 chr18 9832654 9832951 -76844597 - AluY SINE Alu -18 293 2 2097 139 5 40 chr18 9832968 9833153 -76844395 + MER46B DNA MER2_type 1 43 -2688 2535 66 0 0 chr18 9833153 9833455 -76844093 + AluY SINE Alu 1 302 -9 2097 139 5 40 chr18 9833455 9833643 -76843905 + MER46B DNA MER2_type 43 236 0 921 230 32 14 chr18 9836124 9836341 -76841207 + MER58A DNA MER1_type 4 224 0 2583 65 0 0 chr18 9836367 9836674 -76840874 - AluY SINE Alu -4 307 1 303 312 127 9 chr18 9836745 9836966 -76840582 - L1MDa LINE L1 -4576 1553 1307 1418 121 0 88 chr18 9836996 9837182 -76840366 - AluSg/x SINE Alu 0 310 150 2401 97 0 0 chr18 9837182 9837492 -76840056 - AluSg SINE Alu 0 310 1 1418 121 0 88 chr18 9837492 9837554 -76839994 - AluSg/x SINE Alu -160 150 84 1145 284 75 49 chr18 9837713 9838603 -76838945 - L1MDa LINE L1 -4954 1165 253 2006 122 54 0 chr18 9838735 9839029 -76838519 + AluSx SINE Alu 1 310 -2 2105 122 3 7 chr18 9839039 9839333 -76838215 + AluSx SINE Alu 1 293 -19 2249 105 0 0 chr18 9839821 9840115 -76837433 - AluSc SINE Alu -15 294 1 214 333 128 26 chr18 9840135 9840291 -76837257 + MIR SINE MIR 20 191 -71 181 294 0 0 chr18 9840389 9840440 -76837108 + L2 LINE L2 3263 3313 0 266 164 18 0 chr18 9840545 9840600 -76836948 + CT-rich Low_complexity Low_complexity 3 58 0 1108 153 0 93 chr18 9840600 9840836 -76836712 - AluJo SINE Alu -13 299 86 2340 84 3 23 chr18 9842295 9842604 -76834944 - AluSx SINE Alu -9 303 1 313 338 43 39 chr18 9842905 9843112 -76834436 + L1 LINE L1 3572 3779 -2367 2025 122 0 59 chr18 9843123 9843443 -76834105 + AluSg1 SINE Alu 1 301 -8 1368 199 64 17 chr18 9843649 9843946 -76833602 + MLT1A1 LTR MaLR 1 311 -54 547 183 0 52 chr18 9844764 9844879 -76832669 - FLAM_C SINE Alu -28 115 7 26 0 0 0 chr18 9845158 9845184 -76832364 + AT_rich Low_complexity Low_complexity 1 26 0 271 242 92 42 chr18 9845782 9845902 -76831646 - MIR SINE MIR -117 145 20 1929 160 0 13 chr18 9846891 9847204 -76830344 - AluJo SINE Alu -3 309 1 2258 113 0 3 chr18 9847216 9847517 -76830031 - AluSg SINE Alu -10 300 1 2061 124 7 10 chr18 9847517 9847816 -76829732 - AluSx SINE Alu -14 298 1 180 0 0 0 chr18 9848617 9848637 -76828911 + (A)n Simple_repeat Simple_repeat 1 20 0 2523 59 0 0 chr18 9849430 9849733 -76827815 + AluY SINE Alu 1 303 -8 633 300 82 18 chr18 9849745 9850085 -76827463 + HAL1b LINE L1 360 721 -627 2149 121 3 3 chr18 9850370 9850667 -76826881 + AluSc SINE Alu 1 297 -12 2181 100 17 0 chr18 9850677 9850966 -76826582 + AluSx SINE Alu 1 294 -18 929 181 60 48 chr18 9851659 9851907 -76825641 - ORSL DNA AcHobo -23 252 2 285 338 80 0 chr18 9852494 9852645 -76824903 + MIR SINE MIR 88 250 -12 288 263 88 34 chr18 9853022 9853248 -76824300 - L2 LINE L2 -10 3303 3104 307 97 16 16 chr18 9853891 9853953 -76823595 + (TA)n Simple_repeat Simple_repeat 1 62 0 2248 170 28 21 chr18 9854005 9854428 -76823120 - MSTB LTR MaLR 0 426 1 210 118 0 0 chr18 9855057 9855091 -76822457 + (CAT)n Simple_repeat Simple_repeat 2 35 0 2549 153 10 53 chr18 9855169 9855422 -76822126 + L1PA16 LINE L1 5688 5911 -255 2017 134 17 0 chr18 9855422 9855712 -76821836 + AluSx SINE Alu 1 295 -17 2549 153 10 53 chr18 9855712 9855949 -76821599 + L1PA16 LINE L1 5911 6157 -9 2219 85 17 0 chr18 9856177 9856472 -76821076 - AluY SINE Alu -11 300 1 2220 84 17 0 chr18 9856472 9856770 -76820778 - AluSx SINE Alu -9 303 1 28 0 0 0 chr18 9857057 9857085 -76820463 + AT_rich Low_complexity Low_complexity 1 28 0 192 125 0 0 chr18 9857573 9857605 -76819943 + (CTCA)n Simple_repeat Simple_repeat 1 32 0 512 233 87 6 chr18 9857657 9857829 -76819719 - LTR50 LTR ERVL -1 794 609 611 239 279 12 chr18 9857876 9858206 -76819342 - LTR50 LTR ERVL -377 418 1 2111 105 58 0 chr18 9858738 9859033 -76818515 - AluSx SINE Alu 0 312 1 1919 92 34 116 chr18 9859037 9859364 -76818184 - AluSx SINE Alu -12 300 1 2231 75 43 0 chr18 9859600 9859881 -76817667 - AluY SINE Alu -18 293 1 240 250 0 16 chr18 9860336 9860400 -76817148 + LTR33A LTR ERVL 450 512 -11 2122 114 0 7 chr18 9861526 9861823 -76815725 - AluSg SINE Alu -15 295 1 180 0 0 0 chr18 9862630 9862650 -76814898 + (TC)n Simple_repeat Simple_repeat 1 20 0 432 235 45 38 chr18 9862743 9862875 -76814673 - MLT1K LTR MaLR -255 333 201 2613 62 0 0 chr18 9864353 9864661 -76812887 + AluY SINE Alu 2 309 -2 2607 129 8 3 chr18 9864931 9865319 -76812229 - MLT1B LTR MaLR 0 390 1 2088 98 20 30 chr18 9866654 9866951 -76810597 + AluY SINE Alu 1 294 -17 244 207 92 23 chr18 9867112 9867199 -76810349 - MLT1L LTR MaLR -384 231 139 2324 150 111 5 chr18 9867558 9867971 -76809577 - MSTB2 LTR MaLR 0 457 1 2405 99 3 0 chr18 9868378 9868682 -76808866 - AluSp SINE Alu -8 305 1 562 224 59 35 chr18 9868799 9868969 -76808579 - MER104 DNA Tc2 0 180 7 181 229 0 0 chr18 9869206 9869241 -76808307 - L2 LINE L2 -25 3247 3213 2317 150 76 2 chr18 9870382 9870789 -76806759 - LTR23 LTR ERV1 0 437 1 2542 145 58 62 chr18 9870881 9870915 -76806633 - MLT2B2 LTR ERVL 0 515 482 546 119 0 0 chr18 9870915 9870999 -76806549 + (TAGA)n Simple_repeat Simple_repeat 3 86 0 2542 145 58 62 chr18 9870999 9871481 -76806067 - MLT2B2 LTR ERVL -33 482 1 525 331 6 0 chr18 9872308 9872477 -76805071 + (CA)n Simple_repeat Simple_repeat 2 171 0 2099 123 0 0 chr18 9873776 9874068 -76803480 + AluSq SINE Alu 1 292 -21 507 263 40 6 chr18 9875007 9875182 -76802366 + MIR SINE MIR 58 238 -24 4651 191 16 25 chr18 9875832 9876075 -76801473 - L1 LINE L1 -1503 4643 4399 2439 80 0 13 chr18 9876075 9876387 -76801161 - AluY SINE Alu -3 308 1 2137 92 3 11 chr18 9876391 9876720 -76800828 - AluY SINE Alu 0 327 1 4651 191 16 25 chr18 9876720 9877473 -76800075 - L1 LINE L1 -1750 4396 3650 * 5345 124 28 16 chr18 9877472 9878321 -76799227 + L1PA16 LINE L1 5294 6152 -14 24 32 0 0 chr18 9878322 9878353 -76799195 + AT_rich Low_complexity Low_complexity 1 31 0 606 192 124 80 chr18 9878535 9878592 -76798956 - L1MB7 LINE L1 0 6682 6629 2385 88 0 0 chr18 9878592 9878887 -76798661 - AluSx SINE Alu -17 295 1 606 192 124 80 chr18 9878887 9879079 -76798469 - L1MB7 LINE L1 -53 6629 6422 * 6156 244 52 34 chr18 9879076 9879285 -76798263 - L1MB7 LINE L1 -685 5997 5793 2460 62 0 0 chr18 9879285 9879575 -76797973 - AluY SINE Alu -21 290 1 6156 244 52 34 chr18 9879575 9881432 -76796116 - L1MB7 LINE L1 -889 5793 3972 2572 60 0 0 chr18 9881432 9881732 -76795816 - AluY SINE Alu -11 300 1 6156 244 52 34 chr18 9881732 9883698 -76793850 - L1MB7 LINE L1 -2710 3972 2044 2315 168 9 70 chr18 9883698 9883839 -76793709 - L1MB3 LINE L1 -2 6181 6033 2187 174 52 7 chr18 9883839 9884247 -76793301 + MSTB LTR MaLR 1 426 0 2315 168 9 70 chr18 9884247 9884630 -76792918 - L1MB3 LINE L1 -150 6033 5689 6156 244 52 34 chr18 9884630 9884714 -76792834 - L1MB7 LINE L1 -4638 2044 1963 2197 128 7 0 chr18 9884714 9885011 -76792537 - AluSx SINE Alu -13 299 1 6156 244 52 34 chr18 9885011 9885537 -76792011 - L1MB7 LINE L1 -4719 1963 1130 683 175 62 28 chr18 9885683 9885860 -76791688 - L1MB7 LINE L1 -5417 1125 943 1080 137 0 44 chr18 9885860 9886043 -76791505 - AluSg/x SINE Alu -11 301 127 2479 90 0 0 chr18 9886044 9886355 -76791193 - AluY SINE Alu 0 311 1 235 96 58 19 chr18 9886361 9886413 -76791135 - L1MA5A LINE L1 0 6297 6244 274 158 35 0 chr18 9887055 9887112 -76790436 - L1MB3 LINE L1 -652 5639 5581 1774 179 32 29 chr18 9887114 9887522 -76790026 + L1MA7 LINE L1 5883 6291 0 2140 89 18 61 chr18 9887561 9887888 -76789660 + AluSq SINE Alu 1 313 0 1646 118 0 13 chr18 9887914 9888143 -76789405 + AluSx SINE Alu 1 226 -86 344 294 68 9 chr18 9888502 9888723 -76788825 - L1MEc LINE L1 -4751 2074 1841 283 243 61 106 chr18 9888783 9889322 -76788226 - L1MEc LINE L1 -4917 1717 1203 1376 232 32 0 chr18 9889832 9890112 -76787436 + AluJo SINE Alu 1 289 -23 413 241 4 24 chr18 9892627 9892759 -76784789 - L1ME3A LINE L1 -280 5882 5757 2209 97 7 3 chr18 9892764 9893063 -76784485 + AluSg SINE Alu 1 300 -10 243 0 0 0 chr18 9893162 9893189 -76784359 + (TA)n Simple_repeat Simple_repeat 1 27 0 2277 103 3 3 chr18 9893192 9893503 -76784045 - AluY SINE Alu 0 311 1 1830 174 7 0 chr18 9893829 9894122 -76783426 + AluJo SINE Alu 5 299 -13 2198 98 3 7 chr18 9894125 9894441 -76783107 + AluSx SINE Alu 1 315 0 186 366 60 15 chr18 9894551 9894685 -76782863 + MIR SINE MIR 2 141 -121 417 109 0 106 chr18 9894843 9894913 -76782635 - AluSp SINE Alu -115 188 135 2284 97 3 31 chr18 9894913 9895233 -76782315 - AluY SINE Alu 0 311 1 418 117 29 107 chr18 9895242 9895345 -76782203 - L1MA5A LINE L1 -3 6294 6200 * 1959 228 111 4 chr18 9895342 9895811 -76781737 - L1MEc LINE L1 -5983 559 41 186 182 52 91 chr18 9896670 9896747 -76780801 + MIR SINE MIR 92 165 -97 2302 115 0 0 chr18 9897308 9897613 -76779935 - AluSg SINE Alu -5 305 1 452 189 33 192 chr18 9898540 9898842 -76778706 + MLT1J LTR MaLR 105 358 -153 5076 12 0 0 chr18 9900755 9901318 -76776230 - L1PA2 LINE L1 0 6155 5593 1556 198 54 17 chr18 9901334 9901683 -76775865 + MLT1A1 LTR MaLR 1 362 -3 2312 103 0 0 chr18 9901699 9902000 -76775548 + AluSg SINE Alu 1 301 -9 566 180 66 93 chr18 9902668 9902851 -76774697 - L2 LINE L2 -11 3302 3125 275 64 0 85 chr18 9902852 9902899 -76774649 - MLT2B3 LTR ERVL -5 548 506 2622 180 33 52 chr18 9902913 9903457 -76774091 - MLT2B3 LTR ERVL -20 534 1 519 261 94 44 chr18 9903612 9903792 -76773756 - MLT1L LTR MaLR -5 610 422 271 239 30 30 chr18 9903909 9903976 -76773572 - MLT1K LTR MaLR -342 246 180 17015 130 26 6 chr18 9903981 9906643 -76770905 - Tigger2 DNA MER2_type -3 2715 2 1519 169 3 60 chr18 9907013 9907156 -76770392 + AluJo SINE Alu 7 126 -186 2252 83 10 27 chr18 9907156 9907457 -76770091 + AluSp SINE Alu 1 296 -17 1519 169 3 60 chr18 9907457 9907615 -76769933 + AluJo SINE Alu 126 291 -21 2277 79 0 0 chr18 9907844 9908160 -76769388 + AluY SINE Alu 1 316 0 293 319 53 18 chr18 9908360 9908529 -76769019 + MER5B DNA MER1_type 4 178 0 296 214 82 10 chr18 9908617 9908715 -76768833 + MIR3 SINE MIR 104 208 0 2114 140 7 0 chr18 9908778 9909085 -76768463 + AluSx SINE Alu 1 309 -3 536 200 200 0 chr18 9909313 9909478 -76768070 - MIR SINE MIR -31 231 34 434 269 93 6 chr18 9909652 9909834 -76767714 + LTR33 LTR ERVL 2 199 -322 304 305 53 21 chr18 9909889 9910076 -76767472 + LTR33 LTR ERVL 328 520 -1 409 353 0 0 chr18 9910181 9910354 -76767194 + (TG)n Simple_repeat Simple_repeat 2 174 0 286 240 40 0 chr18 9910987 9911062 -76766486 + MLT1K LTR MaLR 506 583 -5 440 250 56 14 chr18 9911068 9911212 -76766336 - MIR SINE MIR -102 160 11 329 359 13 6 chr18 9912398 9912557 -76764991 + MIR SINE MIR 96 255 -7 2136 95 24 17 chr18 9912889 9913183 -76764365 - AluSx SINE Alu -16 296 1 281 262 48 12 chr18 9913876 9913960 -76763588 + Charlie7 DNA MER1_type 5 91 -2521 302 206 75 81 chr18 9913968 9914057 -76763491 + Charlie7 DNA MER1_type 2446 2535 -77 2258 81 7 17 chr18 9914057 9914353 -76763195 - AluY SINE Alu -18 293 1 302 206 75 81 chr18 9914353 9914423 -76763125 + Charlie7 DNA MER1_type 2535 2604 -8 21 0 0 0 chr18 9914497 9914518 -76763030 + AT_rich Low_complexity Low_complexity 1 21 0 805 156 4 14 chr18 9914618 9914906 -76762642 + (TGGA)n Simple_repeat Simple_repeat 1 284 0 480 263 34 39 chr18 9916871 9917008 -76760540 - L1MC5 LINE L1 -30 7931 7794 333 0 0 0 chr18 9917008 9917045 -76760503 + (CA)n Simple_repeat Simple_repeat 1 37 0 480 263 34 39 chr18 9917045 9917086 -76760462 - L1MC5 LINE L1 -167 7794 7754 291 153 51 0 chr18 9917782 9917841 -76759707 + MIR SINE MIR 85 146 -62 261 346 30 15 chr18 9917975 9918108 -76759440 + MIR SINE MIR 14 148 -114 181 208 57 0 chr18 9918117 9918170 -76759378 - L2 LINE L2 -2 3311 3256 759 244 66 50 chr18 9918201 9918652 -76758896 - L2 LINE L2 -122 3191 2714 1450 150 53 150 chr18 9918656 9918967 -76758581 + Charlie1b DNA MER1_type 1 237 -2524 2378 97 0 0 chr18 9918967 9919275 -76758273 - AluY SINE Alu -3 308 1 1450 150 53 150 chr18 9919275 9919535 -76758013 + Charlie1b DNA MER1_type 237 521 -2 1282 249 161 90 chr18 9919611 9919905 -76757643 - L2 LINE L2 -717 2597 2325 2398 65 3 10 chr18 9919905 9920212 -76757336 - AluY SINE Alu -5 306 2 1282 249 161 90 chr18 9920212 9920849 -76756699 - L2 LINE L2 -989 2325 1563 2312 88 27 0 chr18 9920849 9921143 -76756405 - AluSx SINE Alu -2 310 9 1282 249 161 90 chr18 9921143 9921393 -76756155 - L2 LINE L2 -1751 1563 1332 903 216 53 5 chr18 9922471 9922679 -76754869 + MER20 DNA MER1_type 1 218 -1 242 254 227 0 chr18 9923285 9923395 -76754153 + MIR SINE MIR 109 243 -19 191 304 54 0 chr18 9923679 9923771 -76753777 + L2 LINE L2 2577 2673 -641 2591 59 3 0 chr18 9923856 9924161 -76753387 - AluY SINE Alu -5 306 1 2429 93 0 3 chr18 9924223 9924534 -76753014 - AluSq SINE Alu -3 310 1 2283 73 3 14 chr18 9924802 9925127 -76752421 - AluY SINE Alu 0 322 1 198 279 45 27 chr18 9925674 9925785 -76751763 - MIR3 SINE MIR -37 171 59 574 138 0 0 chr18 9926941 9927034 -76750514 + L1PB1 LINE L1 5698 5790 -361 240 156 0 0 chr18 9927024 9927069 -76750479 - L1MC4 LINE L1 -1339 6703 6659 * 293 155 17 0 chr18 9927070 9927128 -76750420 + (CA)n Simple_repeat Simple_repeat 2 60 0 2478 93 8 27 chr18 9927128 9927494 -76750054 + L1PB1 LINE L1 5793 6151 0 227 244 0 0 chr18 9927978 9928023 -76749525 - L2 LINE L2 -18 3254 3210 356 315 29 8 chr18 9928197 9928335 -76749213 - MIR SINE MIR -65 143 35 1306 136 97 0 chr18 9928750 9928956 -76748592 + MER30 DNA MER1_type 5 230 0 2243 72 0 14 chr18 9928994 9929273 -76748275 + AluY SINE Alu 1 275 -36 818 204 86 54 chr18 9930030 9930344 -76747204 - MER5C DNA MER1_type 0 324 1 1365 204 25 46 chr18 9930348 9930482 -76747066 + MER46B DNA MER2_type 2 0 -2731 2374 67 3 10 chr18 9930482 9930781 -76746767 + AluY SINE Alu 1 297 -14 1365 204 25 46 chr18 9930781 9931014 -76746534 + MER46B DNA MER2_type -1 236 0 2534 79 0 0 chr18 9931102 9931405 -76746143 + AluSp SINE Alu 1 303 -10 1577 216 38 35 chr18 9931425 9931795 -76745753 + MLT1A2 LTR MaLR 4 374 0 1750 106 11 0 chr18 9932965 9933229 -76744319 + L1MA1 LINE L1 6029 6295 -7 2027 116 0 0 chr18 9933349 9933633 -76743915 - AluSg SINE Alu -17 293 10 210 341 37 0 chr18 9933668 9933750 -76743798 - L2 LINE L2 0 3313 3229 450 360 6 6 chr18 9934060 9934232 -76743316 - L2 LINE L2 -555 2759 2588 1263 284 63 2 chr18 9934301 9934699 -76742849 + LTR16A LTR ERVL 27 448 -2 187 318 212 15 chr18 9934721 9934853 -76742695 - L2 LINE L2 -829 2485 2328 2232 103 0 3 chr18 9935660 9935971 -76741577 + AluY SINE Alu 1 310 -1 235 103 77 0 chr18 9935987 9936026 -76741522 + MLT1G LTR MaLR 139 180 -410 5846 243 87 34 chr18 9936027 9937568 -76739980 + L1MD3 LINE L1 107 1565 -4650 2115 111 0 0 chr18 9937568 9937874 -76739674 + AluY SINE Alu 1 306 -5 2316 69 0 3 chr18 9937879 9938184 -76739364 + AluY SINE Alu 1 304 -7 5846 243 87 34 chr18 9938184 9938777 -76738771 + L1MD3 LINE L1 1568 2319 -3896 2352 133 3 0 chr18 9938782 9939143 -76738405 - L1PB1 LINE L1 -8 6143 5782 302 250 0 0 chr18 9939148 9939204 -76738344 - L1MC4 LINE L1 -1339 6703 6648 595 121 51 15 chr18 9939205 9939315 -76738233 - L1M3 LINE L1 -361 5790 5691 * 1390 216 64 39 chr18 9939314 9939395 -76738153 + L1MD3 LINE L1 2304 2382 -3833 2262 67 0 13 chr18 9939395 9939693 -76737855 + AluY SINE Alu 1 294 -17 1390 216 64 39 chr18 9939693 9940019 -76737529 + L1MD3 LINE L1 2382 2721 -3494 * 1576 209 65 25 chr18 9940013 9940561 -76736987 + L1MD3 LINE L1 5053 5578 -825 2355 73 0 3 chr18 9940561 9940861 -76736687 + AluY SINE Alu 1 299 -12 1576 209 65 25 chr18 9940861 9941351 -76736197 + L1MD3 LINE L1 5578 6403 0 239 316 26 60 chr18 9941839 9941956 -76735592 + L2 LINE L2 3160 3272 0 345 227 27 0 chr18 9942108 9942183 -76735365 - MIR SINE MIR -8 254 178 1973 137 104 25 chr18 9942196 9942553 -76734995 - MLT1B LTR MaLR -5 385 1 523 298 30 24 chr18 9942556 9942724 -76734824 - MIR SINE MIR -92 170 2 225 306 111 0 chr18 9943524 9943596 -76733952 - L2 LINE L2 -44 3269 3190 2333 44 0 3 chr18 9944210 9944506 -76733042 - AluY SINE Alu -16 295 1 1583 221 11 27 chr18 9944532 9944903 -76732645 + MLT1A1 LTR MaLR 1 365 0 279 197 14 14 chr18 9945322 9945393 -76732155 + CT-rich Low_complexity Low_complexity 3 73 0 343 308 63 5 chr18 9945639 9945860 -76731688 - L1MEc LINE L1 -4751 1559 1326 256 243 61 106 chr18 9945920 9946459 -76731089 - L1MEc LINE L1 -4917 1202 688 1270 232 32 0 chr18 9946969 9947249 -76730299 + AluJo SINE Alu 1 289 -23 371 305 105 36 chr18 9948708 9948928 -76728620 - L1MC/D LINE L1 -637 5484 5255 403 237 10 31 chr18 9949764 9949896 -76727652 - L1ME3A LINE L1 -288 5882 5757 1973 116 3 13 chr18 9949901 9950212 -76727336 + AluSg SINE Alu 1 308 -2 234 366 60 15 chr18 9950327 9950461 -76727087 + MIR SINE MIR 2 141 -121 262 326 8 45 chr18 9951134 9951266 -76726282 - MLT1K LTR MaLR -15 573 447 2311 77 7 0 chr18 9951429 9951726 -76725822 - AluSx SINE Alu -13 299 1 5437 144 76 72 chr18 9951908 9953897 -76723651 + pTR5 LTR ERV1 743 2438 0 502 302 92 47 chr18 9954069 9954275 -76723273 + MLT1I LTR MaLR 12 207 -202 1491 142 0 0 chr18 9954275 9954507 -76723041 - AluSc SINE Alu -11 298 67 502 302 92 47 chr18 9954507 9954681 -76722867 + MLT1I LTR MaLR 207 409 0 573 212 64 39 chr18 9954858 9955061 -76722487 + MLT1J2 LTR MaLR 2 209 -241 201 191 29 29 chr18 9955679 9955747 -76721801 + (TAA)n Simple_repeat Simple_repeat 1 68 0 1821 118 39 4 chr18 9955747 9956026 -76721522 - AluSq SINE Alu -19 294 6 5526 72 104 3 chr18 9956170 9956920 -76720628 - LTR12 LTR ERV1 0 826 1 501 278 75 66 chr18 9957913 9958125 -76719423 - MIR SINE MIR -35 227 14 303 295 92 37 chr18 9958587 9958804 -76718744 + LTR16C LTR ERVL 260 488 -3 438 290 127 45 chr18 9958939 9959253 -76718295 - LTR16A LTR ERVL -7 443 104 2044 82 43 4 chr18 9959445 9959725 -76717823 + AluSg1 SINE Alu 1 291 -18 387 286 30 38 chr18 9959758 9959891 -76717657 - MIR3 SINE MIR -62 146 15 22 35 0 0 chr18 9959973 9960002 -76717546 + AT_rich Low_complexity Low_complexity 1 29 0 222 329 137 14 chr18 9962969 9963115 -76714433 - MIR3 SINE MIR -13 195 32 2191 105 0 7 chr18 9963474 9963780 -76713768 + AluSx SINE Alu 1 304 -8 279 236 62 28 chr18 9964200 9964309 -76713239 - MLT1H1 LTR MaLR 0 555 431 * 293 288 38 0 chr18 9964308 9964388 -76713160 - MLT1H1 LTR MaLR -399 156 74 225 94 0 0 chr18 9964470 9964502 -76713046 + (TC)n Simple_repeat Simple_repeat 1 32 0 889 301 31 31 chr18 9964778 9965133 -76712415 - Charlie8 DNA MER1_type -1886 531 177 388 263 49 99 chr18 9965413 9965608 -76711940 - HERVL LTR ERVL -4102 1552 1370 2247 125 36 31 chr18 9965608 9965967 -76711581 - THE1B LTR MaLR 0 364 4 388 263 49 99 chr18 9965967 9966014 -76711534 - HERVL LTR ERVL -4284 1370 1322 1850 145 7 26 chr18 9966027 9966337 -76711211 + AluSx SINE Alu 1 304 -8 617 309 71 49 chr18 9966375 9967168 -76710380 - HERVL LTR ERVL -4290 1195 394 793 254 48 75 chr18 9967555 9967633 -76709915 - LTR41 LTR ERVL -6 767 688 2181 80 0 30 chr18 9967633 9967933 -76709615 + AluY SINE Alu 1 291 -20 2010 128 0 0 chr18 9967933 9968231 -76709317 + AluY SINE Alu 1 298 -13 793 254 48 75 chr18 9968231 9968850 -76708698 - LTR41 LTR ERVL -83 690 13 244 300 0 0 chr18 9968858 9968918 -76708630 - MER94 DNA DNA -73 61 2 307 283 33 0 chr18 9969300 9969392 -76708156 - Charlie8 DNA MER1_type -2244 173 79 474 228 9 53 chr18 9969428 9969542 -76708006 + MIR SINE MIR 81 189 -73 1907 137 0 32 chr18 9970237 9970550 -76706998 - AluSx SINE Alu -9 303 1 836 302 58 4 chr18 9971414 9971656 -76705892 + MIR SINE MIR 8 262 0 359 343 84 58 chr18 9971924 9972001 -76705547 - L2 LINE L2 -77 3195 3121 354 45 0 0 chr18 9972001 9972045 -76705503 + (CACAG)n Simple_repeat Simple_repeat 3 46 0 359 343 84 58 chr18 9972045 9972326 -76705222 - L2 LINE L2 -151 3121 2828 547 331 81 29 chr18 9972429 9972837 -76704711 - L2 LINE L2 -642 2672 2244 201 326 0 0 chr18 9972839 9972971 -76704577 + (CA)n Simple_repeat Simple_repeat 1 132 0 2165 105 0 3 chr18 9975269 9975573 -76701975 - AluSx SINE Alu -9 303 1 1654 107 0 0 chr18 9976398 9976622 -76700926 + AluSq SINE Alu 27 250 -63 778 266 37 0 chr18 9976888 9977102 -76700446 - LTR16C LTR ERVL -1 490 269 279 291 0 58 chr18 9977637 9977723 -76699825 + L2 LINE L2 3188 3268 -4 1983 203 34 14 chr18 9977749 9978167 -76699381 + MSTB LTR MaLR 1 426 0 219 269 202 10 chr18 9978305 9978390 -76699158 + L2 LINE L2 3149 3259 -13 2062 98 13 35 chr18 9978390 9978705 -76698843 + AluSg SINE Alu 1 308 -2 219 269 202 10 chr18 9978705 9978723 -76698825 + L2 LINE L2 3259 3272 0 917 232 79 0 chr18 9978748 9978989 -76698559 + MIR SINE MIR 3 262 0 2138 175 87 11 chr18 9979057 9979503 -76698045 + LTR12 LTR ERV1 1 480 -234 182 415 0 0 chr18 9979640 9979693 -76697855 + MIR SINE MIR 18 70 -138 549 275 137 23 chr18 9980794 9981100 -76696448 + L1MC5 LINE L1 5982 6120 -1 216 323 0 0 chr18 9981779 9981841 -76695707 - L2 LINE L2 -6 3307 3246 207 0 0 0 chr18 9981922 9981945 -76695603 + (A)n Simple_repeat Simple_repeat 1 23 0 1815 274 207 12 chr18 9982149 9982442 -76695106 - L2 LINE L2 -797 2517 2283 2332 187 44 31 chr18 9982442 9982993 -76694555 - MER74A LTR ERVL 0 558 1 1815 274 207 12 chr18 9982993 9983549 -76693999 - L2 LINE L2 -1031 2283 1477 1766 179 82 26 chr18 9983549 9983623 -76693925 + MLT1A1 LTR MaLR 5 73 -292 2177 107 3 13 chr18 9983623 9983932 -76693616 + AluSg SINE Alu 1 306 -4 1766 179 82 26 chr18 9983932 9984198 -76693350 + MLT1A1 LTR MaLR 73 364 -1 1815 274 207 12 chr18 9984198 9984295 -76693253 - L2 LINE L2 -1837 1477 1400 2263 96 3 0 chr18 9986869 9987161 -76690387 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr18 9988517 9988540 -76689008 + AT_rich Low_complexity Low_complexity 1 23 0 964 212 75 81 chr18 9988559 9988866 -76688682 - L1MD2 LINE L1 -17 6736 6432 2148 94 3 27 chr18 9988872 9989171 -76688377 - AluSc SINE Alu -17 292 1 2900 178 9 18 chr18 9989191 9989742 -76687806 - L1MD2 LINE L1 -417 6219 5674 37957 30 1 0 chr18 9989754 9995075 -76682473 + L1PA2 LINE L1 701 6155 0 228 100 0 0 chr18 9995082 9995122 -76682426 + (TTAAA)n Simple_repeat Simple_repeat 3 42 0 5943 253 38 37 chr18 9995129 9995304 -76682244 - L1MD2 LINE L1 -858 5682 5509 2281 99 0 0 chr18 9995304 9995597 -76681951 + AluSg SINE Alu 1 293 -17 5943 253 38 37 chr18 9995597 9995753 -76681795 - L1MD2 LINE L1 -1031 5509 5355 303 28 0 0 chr18 9995753 9995789 -76681759 + (ATG)n Simple_repeat Simple_repeat 3 38 0 5943 253 38 37 chr18 9995789 9996276 -76681272 - L1MD2 LINE L1 -1185 5355 4870 2066 133 0 3 chr18 9996276 9996577 -76680971 - AluSg SINE Alu -10 300 1 5943 253 38 37 chr18 9996577 9996637 -76680911 - L1MD2 LINE L1 -1670 4870 4812 1774 167 0 50 chr18 9996637 9996992 -76680556 - AluSx SINE Alu 0 312 1 5943 253 38 37 chr18 9996992 9997507 -76680041 - L1MD2 LINE L1 -1728 4812 4299 2471 96 0 0 chr18 9997507 9997820 -76679728 - AluSq SINE Alu 0 313 1 5943 253 38 37 chr18 9997820 9998157 -76679391 - L1MD2 LINE L1 -2241 4299 3943 2291 109 0 0 chr18 9998157 9998460 -76679088 - AluSg SINE Alu -7 303 1 5943 253 38 37 chr18 9998460 9998761 -76678787 - L1MD2 LINE L1 -2597 3943 3644 5854 126 44 31 chr18 9998756 9998917 -76678631 - L1MA8 LINE L1 -1 6290 6133 * 6501 32 3 0 chr18 9998917 9999624 -76677924 - L1PA4 LINE L1 -3 6152 5441 2236 55 44 0 chr18 9999624 9999897 -76677651 - AluY SINE Alu -26 285 1 6501 32 3 0 chr18 9999897 9999912 -76677636 - L1PA4 LINE L1 -714 5441 5428 5854 126 44 31 chr18 9999912 10000579 -76676969 - L1MA8 LINE L1 -158 6133 5439 2220 108 0 7 chr18 10000579 10000885 -76676663 - AluSx SINE Alu -8 304 1 5854 126 44 31 chr18 10000885 10001215 -76676333 - L1MA8 LINE L1 -852 5439 5115 1356 210 6 6 chr18 10001218 10001561 -76675987 - L1MD2 LINE L1 -2884 3656 3314 2567 81 0 0 chr18 10001581 10001890 -76675658 + AluSx SINE Alu 1 309 -3 243 0 0 0 chr18 10002030 10002057 -76675491 + (A)n Simple_repeat Simple_repeat 1 27 0 440 313 94 5 chr18 10002726 10002918 -76674630 - MIR SINE MIR -5 257 49 2564 51 0 0 chr18 10003082 10003376 -76674172 - AluY SINE Alu -17 294 1 2211 215 63 45 chr18 10003385 10003794 -76673754 - L1MD2 LINE L1 -3219 3321 2921 2283 108 3 0 chr18 10003794 10004099 -76673449 - AluSg SINE Alu -4 306 1 2211 215 63 45 chr18 10004099 10004120 -76673428 - L1MD2 LINE L1 -3619 2921 2902 2417 68 3 7 chr18 10004120 10004416 -76673132 - AluY SINE Alu -16 295 1 2317 81 7 3 chr18 10004418 10004713 -76672835 - AluSp SINE Alu -17 296 1 2211 215 63 45 chr18 10004713 10005034 -76672514 - L1MD2 LINE L1 -3638 2902 2588 2214 90 6 32 chr18 10005034 10005346 -76672202 - AluSq SINE Alu -9 304 1 2211 215 63 45 chr18 10005346 10005817 -76671731 - L1MD2 LINE L1 -3952 2588 2088 2269 82 3 13 chr18 10005817 10006121 -76671427 - AluY SINE Alu -10 301 1 2211 215 63 45 chr18 10006121 10006201 -76671347 - L1MD2 LINE L1 -4452 2088 2011 377 240 0 0 chr18 10006229 10006304 -76671244 - Tigger5 DNA MER2_type -7 2316 2242 2328 147 52 2 chr18 10006494 10006901 -76670647 - L1MA8 LINE L1 -3 6288 5862 346 320 85 76 chr18 10006903 10007244 -76670304 - L2 LINE L2 -15 3257 2914 283 313 0 0 chr18 10007467 10007547 -76670001 + GA-rich Low_complexity Low_complexity 2 81 0 302 219 29 124 chr18 10007934 10008012 -76669536 + MIR SINE MIR 58 119 -143 1731 176 20 10 chr18 10008012 10008314 -76669234 - AluJo SINE Alu -7 305 1 302 219 29 124 chr18 10008314 10008372 -76669176 + MIR SINE MIR 119 181 -81 219 244 13 77 chr18 10008388 10008466 -76669082 + MIR SINE MIR 109 181 -81 1393 228 37 15 chr18 10008591 10008805 -76668743 - MER58B DNA MER1_type -2082 338 113 1816 76 0 0 chr18 10008805 10009029 -76668519 + AluY SINE Alu 86 309 -2 1393 228 37 15 chr18 10009029 10009139 -76668409 - MER58B DNA MER1_type -2307 113 7 2018 101 0 0 chr18 10009728 10009985 -76667563 + AluSc SINE Alu 41 297 -12 27 29 0 0 chr18 10010024 10010058 -76667490 + AT_rich Low_complexity Low_complexity 1 34 0 942 316 132 50 chr18 10010191 10011202 -76666346 + L2 LINE L2 1884 2976 -338 2355 110 0 0 chr18 10011216 10011526 -76666022 - AluSg SINE Alu 0 310 1 2435 67 0 10 chr18 10011565 10011863 -76665685 - AluY SINE Alu -16 295 1 1948 96 17 48 chr18 10013159 10013481 -76664067 + AluSx SINE Alu 1 313 0 2316 67 0 7 chr18 10014210 10014519 -76663029 + AluY SINE Alu 1 307 0 1936 154 7 3 chr18 10014801 10015100 -76662448 - AluJo SINE Alu -12 300 1 256 250 44 29 chr18 10015223 10015359 -76662189 + L1M4 LINE L1 4104 4241 -1905 331 270 102 51 chr18 10015457 10015672 -76661876 + L1M4 LINE L1 4549 4774 -1372 2308 104 3 3 chr18 10015891 10016198 -76661350 - AluSx SINE Alu -5 307 1 793 136 53 8 chr18 10016244 10016376 -76661172 - L1PB3 LINE L1 0 6154 6017 6035 155 11 60 chr18 10016505 10018239 -76659309 - L1PA14 LINE L1 -84 6077 4336 847 125 16 0 chr18 10018239 10018367 -76659181 + AluSg/x SINE Alu 172 301 -11 6035 155 11 60 chr18 10018367 10018566 -76658982 - L1PA14 LINE L1 -1825 4336 4129 207 244 195 0 chr18 10018568 10018650 -76658898 + L2 LINE L2 3171 3268 -4 2260 43 4 11 chr18 10019546 10019847 -76657701 - AluY SINE Alu 0 304 6 240 143 0 0 chr18 10019943 10019985 -76657563 + (TG)n Simple_repeat Simple_repeat 2 43 0 195 340 60 13 chr18 10021156 10021306 -76656242 - MIR SINE MIR -70 192 36 203 348 14 0 chr18 10022043 10022112 -76655436 - L2 LINE L2 -9 3263 3194 216 251 58 145 chr18 10022257 10022464 -76655084 - L2 LINE L2 -213 3059 2871 357 299 3 139 chr18 10022471 10022759 -76654789 + L2 LINE L2 3003 3251 -21 1839 162 18 0 chr18 10023303 10023587 -76653961 + AluJo SINE Alu 1 289 -23 316 330 74 34 chr18 10023624 10023800 -76653748 + MIR3 SINE MIR 7 189 -19 364 288 61 25 chr18 10024405 10024568 -76652980 + MER104 DNA Tc2 1 169 -11 285 308 88 42 chr18 10025079 10025339 -76652209 + L2 LINE L2 1693 1964 -1350 1104 243 60 7 chr18 10025643 10025943 -76651605 - L1MD3 LINE L1 -14 7981 7666 359 169 0 0 chr18 10025943 10026002 -76651546 - MER20B DNA MER1_type -39 744 686 496 229 245 21 chr18 10026164 10026356 -76651192 + MIR SINE MIR 3 237 -25 551 221 150 7 chr18 10026405 10026501 -76651047 - MER58C DNA MER1_type -2205 215 91 270 0 0 0 chr18 10026501 10026531 -76651017 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 551 221 150 7 chr18 10026531 10026574 -76650974 - MER58C DNA MER1_type -2329 91 56 373 309 8 0 chr18 10026857 10026980 -76650568 + MLT1J2 LTR MaLR 22 145 -305 366 259 136 41 chr18 10027064 10027211 -76650337 + MLT1J2 LTR MaLR 276 436 -14 2367 45 45 0 chr18 10027411 10027700 -76649848 - AluY SINE Alu -9 302 1 2323 94 0 0 chr18 10027789 10028076 -76649472 - AluSx SINE Alu -24 288 2 23 33 0 0 chr18 10028079 10028109 -76649439 + AT_rich Low_complexity Low_complexity 1 30 0 256 24 0 49 chr18 10028152 10028193 -76649355 + AluY SINE Alu 6 44 -259 2107 139 0 7 chr18 10028301 10028610 -76648938 - AluSx SINE Alu -3 309 3 988 189 5 21 chr18 10028653 10028843 -76648705 - AluJo SINE Alu -23 289 103 222 250 73 0 chr18 10028924 10028951 -76648597 - MIR SINE MIR -116 92 68 198 0 0 0 chr18 10028951 10028973 -76648575 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 222 250 73 0 chr18 10028973 10029013 -76648535 - MIR SINE MIR -140 68 20 191 235 244 50 chr18 10029270 10029389 -76648159 - MIR SINE MIR -98 164 23 2441 57 3 3 chr18 10030628 10030929 -76646619 + AluY SINE Alu 1 301 -10 1383 147 0 14 chr18 10031128 10031346 -76646202 - AluJb SINE Alu -95 217 3 246 287 17 35 chr18 10031351 10031367 -76646181 - L1MA10 LINE L1 0 6334 6319 405 277 45 23 chr18 10031367 10031544 -76646004 - L1ME1 LINE L1 -4 6162 5982 291 28 0 0 chr18 10031616 10031652 -76645896 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 204 301 274 33 chr18 10032024 10032177 -76645371 + MIR3 SINE MIR 15 204 -4 858 152 15 30 chr18 10033411 10033543 -76644005 - FLAM_C SINE Alu -3 130 1 249 136 64 18 chr18 10033630 10033740 -76643808 + (TA)n Simple_repeat Simple_repeat 2 116 0 263 308 13 0 chr18 10034781 10034859 -76642689 + L2 LINE L2 3233 3311 -2 433 338 30 5 chr18 10034880 10035078 -76642470 - MIR SINE MIR -45 217 15 3507 20 0 0 chr18 10036482 10036883 -76640665 + L1PA2 LINE L1 5755 6155 0 1317 95 0 0 chr18 10037327 10037495 -76640053 - AluSg/x SINE Alu -11 301 134 2427 73 7 10 chr18 10037495 10037798 -76639750 - AluSg1 SINE Alu -7 302 1 777 231 96 0 chr18 10038258 10038457 -76639091 - MER20 DNA MER1_type -1 218 1 1531 140 36 91 chr18 10038656 10039042 -76638506 - MLT1A1 LTR MaLR 0 365 1 655 219 111 65 chr18 10040414 10040849 -76636699 - LTR45B LTR ERV1 -26 499 1 2053 94 36 0 chr18 10041774 10042050 -76635498 + AluSx SINE Alu 1 286 -26 240 35 0 0 chr18 10042053 10042082 -76635466 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 305 248 138 48 chr18 10042421 10042566 -76634982 + MLT1I LTR MaLR 234 391 -18 487 247 82 35 chr18 10044562 10044732 -76632816 + MER5B DNA MER1_type 1 178 0 805 203 37 32 chr18 10044740 10044927 -76632621 - MER20 DNA MER1_type 0 219 32 954 171 36 77 chr18 10045420 10045642 -76631906 - MER20 DNA MER1_type -6 213 1 210 176 0 0 chr18 10047125 10047176 -76630372 + (TG)n Simple_repeat Simple_repeat 1 51 0 394 282 60 57 chr18 10047199 10047416 -76630132 - MIR SINE MIR -42 220 1 291 276 205 31 chr18 10048977 10049358 -76628190 - L1ME4a LINE L1 -23 6098 5652 225 269 0 0 chr18 10049384 10049436 -76628112 - L1ME4a LINE L1 -2151 5657 5606 1926 212 61 35 chr18 10049698 10050241 -76627307 - MER74B LTR ERVL -4 618 62 949 166 116 30 chr18 10053221 10053420 -76624128 + AluJb SINE Alu 11 226 -86 706 152 0 32 chr18 10053420 10053545 -76624003 + AluJb SINE Alu 165 285 -27 329 250 172 0 chr18 10054821 10054949 -76622599 + MIR SINE MIR 84 233 -29 309 286 0 11 chr18 10054976 10055067 -76622481 - MIR SINE MIR -125 137 48 219 36 0 0 chr18 10055287 10055315 -76622233 + (GTTTG)n Simple_repeat Simple_repeat 1 28 0 238 282 97 0 chr18 10056127 10056230 -76621318 - L2 LINE L2 -1 3312 3200 576 118 118 92 chr18 10056293 10056338 -76621210 - Charlie5 DNA MER1_type -4 2620 2578 2555 71 0 0 chr18 10056338 10056647 -76620901 - AluY SINE Alu -2 309 1 576 118 118 92 chr18 10056647 10056753 -76620795 - Charlie5 DNA MER1_type -46 2578 2465 1741 148 38 41 chr18 10056817 10057134 -76620414 - MER1B DNA MER1_type 0 339 24 188 243 57 29 chr18 10057139 10057209 -76620339 + L2 LINE L2 3006 3077 -195 304 250 45 56 chr18 10058299 10058443 -76619105 - L1MEd LINE L1 -4909 1463 1265 1580 146 106 56 chr18 10058733 10059110 -76618438 + MSTD LTR MaLR 1 396 0 331 257 50 89 chr18 10059964 10060143 -76617405 + MER104 DNA Tc2 6 177 -3 1845 80 13 0 chr18 10060425 10060662 -76616886 - AluSx SINE Alu -10 302 63 1464 197 51 7 chr18 10060964 10061258 -76616290 + AluJb SINE Alu 1 307 -5 2324 101 0 3 chr18 10062506 10062803 -76614745 + AluSx SINE Alu 1 296 -16 342 226 6 0 chr18 10063604 10063690 -76613858 + L1MC4a LINE L1 5525 5613 -508 360 170 0 0 chr18 10063722 10063828 -76613720 + (CA)n Simple_repeat Simple_repeat 1 106 0 981 181 76 138 chr18 10063829 10063974 -76613574 + MLT1B LTR MaLR 32 184 -206 1718 174 0 7 chr18 10063974 10064261 -76613287 + AluJo SINE Alu 14 298 -14 981 181 76 138 chr18 10064261 10064485 -76613063 + MLT1B LTR MaLR 184 378 -12 2250 102 3 0 chr18 10064529 10064824 -76612724 + AluSg SINE Alu 1 296 -14 280 289 29 24 chr18 10064887 10065095 -76612453 + L1MC4a LINE L1 5717 5825 -337 866 279 229 16 chr18 10065284 10066026 -76611522 + L2 LINE L2 1802 2701 -613 788 282 124 30 chr18 10066361 10066935 -76610613 - L1ME3A LINE L1 -286 5884 5257 272 248 64 40 chr18 10066959 10067084 -76610464 - L1ME3A LINE L1 -939 5207 5080 299 311 157 34 chr18 10067102 10067649 -76609899 + L2 LINE L2 2704 3313 0 537 277 43 29 chr18 10067860 10068268 -76609280 + L2 LINE L2 2652 3108 -205 2086 131 0 3 chr18 10068290 10068587 -76608961 - AluSx SINE Alu -16 296 1 337 254 99 109 chr18 10068654 10068957 -76608591 + HAL1b LINE L1 280 579 -769 301 282 158 30 chr18 10069100 10069302 -76608246 - MIR SINE MIR -12 250 23 196 392 82 0 chr18 10069811 10069969 -76607579 + MIR SINE MIR 91 261 -1 2015 127 3 0 chr18 10070062 10070345 -76607203 - AluSx SINE Alu -4 308 25 660 240 34 53 chr18 10071950 10071996 -76605552 - MER3 DNA MER1_type -5 204 159 2203 125 0 0 chr18 10071996 10072308 -76605240 - AluSx SINE Alu 0 312 1 660 240 34 53 chr18 10072308 10072469 -76605079 - MER3 DNA MER1_type -50 159 1 22 0 0 0 chr18 10073392 10073414 -76604134 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr18 10074099 10074126 -76603422 + AT_rich Low_complexity Low_complexity 1 27 0 292 283 164 17 chr18 10074137 10074314 -76603234 - MIR SINE MIR -13 249 47 1762 150 15 4 chr18 10075767 10076040 -76601508 - MLT2B1 LTR ERVL -244 276 1 241 224 15 45 chr18 10076536 10076603 -76600945 + L3 LINE CR1 619 683 -894 402 260 76 139 chr18 10076633 10076735 -76600813 + LTR67 LTR ERVL 34 141 -416 2013 108 43 0 chr18 10076735 10077013 -76600535 + AluSc SINE Alu 1 290 -19 402 260 76 139 chr18 10077013 10077464 -76600084 + LTR67 LTR ERVL 141 552 -5 214 248 144 8 chr18 10077467 10077592 -76599956 + L3 LINE CR1 679 820 -757 211 245 20 0 chr18 10078928 10078977 -76598571 + GA-rich Low_complexity Low_complexity 2 51 0 999 144 0 0 chr18 10079098 10079244 -76598304 + AluSg/x SINE Alu 122 267 -43 728 279 26 52 chr18 10079964 10080308 -76597240 + MLT1I LTR MaLR 73 407 -2 1053 147 0 21 chr18 10080394 10080585 -76596963 + L1 LINE L1 4159 4345 -1801 1562 138 34 104 chr18 10080596 10080952 -76596596 + L1 LINE L1 4567 4897 -1249 1167 138 6 0 chr18 10080953 10081120 -76596428 + AluJb SINE Alu 132 299 -13 1482 292 96 21 chr18 10081450 10082460 -76595088 - L2 LINE L2 0 3313 2224 1917 195 9 0 chr18 10082469 10082797 -76594751 + MLT1A1 LTR MaLR 23 353 -12 1316 281 128 15 chr18 10082816 10083420 -76594128 - L2 LINE L2 -1098 2216 1545 353 269 46 15 chr18 10083905 10084035 -76593513 + MIR SINE MIR 121 254 -8 25 0 0 0 chr18 10084238 10084263 -76593285 + AT_rich Low_complexity Low_complexity 1 25 0 300 286 159 16 chr18 10084311 10084500 -76593048 + MLT1L LTR MaLR 368 583 -32 1493 194 168 3 chr18 10084507 10084847 -76592701 - MSTD LTR MaLR 0 396 1 5658 159 9 40 chr18 10085082 10085776 -76591772 - L1PA16 LINE L1 -8 6158 5540 2052 136 0 0 chr18 10085776 10086063 -76591485 - AluSx SINE Alu -25 287 1 5658 159 9 40 chr18 10086063 10086775 -76590773 - L1PA16 LINE L1 -626 5540 4807 1845 168 13 0 chr18 10086784 10087082 -76590466 - AluJb SINE Alu -10 302 1 248 359 43 11 chr18 10087421 10087513 -76590035 - L2 LINE L2 -44 3228 3134 203 258 172 55 chr18 10088006 10088134 -76589414 + MIR SINE MIR 82 224 -38 226 242 55 22 chr18 10088217 10088308 -76589240 - L1MC4a LINE L1 -1636 6172 6079 260 255 0 0 chr18 10088350 10088401 -76589147 + (TGGA)n Simple_repeat Simple_repeat 4 54 0 1015 137 0 11 chr18 10088480 10088503 -76589045 + (GGA)n Simple_repeat Simple_repeat 1 202 0 1015 137 0 11 chr18 10088503 10088685 -76588863 + (GGA)n Simple_repeat Simple_repeat 1 180 0 2287 78 0 3 chr18 10089364 10089704 -76587844 + AluY SINE Alu 1 339 0 827 154 0 8 chr18 10090463 10090586 -76586962 + FLAM_A SINE Alu 4 125 -8 21 0 0 0 chr18 10090764 10090785 -76586763 + AT_rich Low_complexity Low_complexity 1 21 0 244 316 25 95 chr18 10090908 10091066 -76586482 - L3b LINE CR1 -114 1469 1323 2213 112 0 0 chr18 10091648 10091953 -76585595 - AluSx SINE Alu -7 305 1 204 241 17 0 chr18 10092205 10092263 -76585285 + MIR SINE MIR 81 139 -69 2213 106 3 3 chr18 10092648 10092959 -76584589 + AluSx SINE Alu 1 311 -1 848 225 0 38 chr18 10093034 10093270 -76584278 + AluJo SINE Alu 3 229 -83 977 225 166 47 chr18 10093385 10093794 -76583754 - MLT1F LTR MaLR 0 542 85 1441 210 30 42 chr18 10094031 10094196 -76583352 - MER58B DNA MER1_type -2079 341 181 2074 110 0 13 chr18 10094196 10094497 -76583051 + AluSg SINE Alu 1 297 -13 1441 210 30 42 chr18 10094497 10094665 -76582883 - MER58B DNA MER1_type -2239 181 12 24 0 0 0 chr18 10095004 10095028 -76582520 + AT_rich Low_complexity Low_complexity 1 24 0 1803 130 59 62 chr18 10095044 10095383 -76582165 + MER44D DNA MER2_type 2 609 0 4108 161 122 5 chr18 10095820 10096560 -76580988 - LTR1B LTR ERV1 0 826 1 207 0 0 0 chr18 10098270 10098293 -76579255 + (TC)n Simple_repeat Simple_repeat 2 24 0 494 311 78 54 chr18 10098863 10099197 -76578351 - LTR16C LTR ERVL -62 429 88 443 329 7 0 chr18 10099649 10099789 -76577759 - HERVL LTR ERVL -849 4805 4665 1972 244 86 25 chr18 10100115 10100550 -76576998 + L2 LINE L2 2326 2733 -580 2441 220 57 30 chr18 10100550 10101127 -76576421 + MLT1E LTR MaLR 1 593 0 1972 244 86 25 chr18 10101127 10101572 -76575976 + L2 LINE L2 2733 3259 -54 1106 316 108 17 chr18 10101570 10102146 -76575402 - L2 LINE L2 -2099 1215 588 * 208 347 42 11 chr18 10102153 10102248 -76575300 - L2 LINE L2 -2867 447 350 1113 222 0 26 chr18 10102249 10102396 -76575152 + MER58A DNA MER1_type 1 141 -2279 3962 128 43 29 chr18 10102396 10103022 -76574526 + MER41B LTR ERV1 1 635 0 1113 222 0 26 chr18 10103022 10103104 -76574444 + MER58A DNA MER1_type 141 224 0 472 316 71 24 chr18 10103105 10103358 -76574190 - L2 LINE L2 -2959 355 91 224 340 43 11 chr18 10104970 10105064 -76572484 - L2 LINE L2 -350 2964 2868 1741 243 58 36 chr18 10105187 10105742 -76571806 - MLT1E LTR MaLR 0 593 27 220 217 29 14 chr18 10105759 10105828 -76571720 - L2 LINE L2 -1261 2053 1984 2269 237 30 11 chr18 10105845 10106351 -76571197 - MER90 LTR ERV1 0 575 55 3632 111 14 19 chr18 10106351 10106867 -76570681 + LTR10D LTR ERV1 1 513 0 2269 237 30 11 chr18 10106867 10106921 -76570627 - MER90 LTR ERV1 -520 55 4 214 67 33 0 chr18 10106972 10107002 -76570546 + MIR SINE MIR 12 42 -220 298 272 53 18 chr18 10107006 10107120 -76570428 + MIR SINE MIR 143 260 -2 285 241 0 0 chr18 10107337 10107395 -76570153 + MER5A DNA MER1_type 57 114 -75 526 201 58 29 chr18 10107421 10107443 -76570105 - L1MA10 LINE L1 0 6334 6313 255 250 94 44 chr18 10107443 10107603 -76569945 - L1ME2 LINE L1 -10 6154 5987 288 301 97 0 chr18 10108297 10108400 -76569148 + L2 LINE L2 3160 3272 0 885 199 28 0 chr18 10108463 10108644 -76568904 - MER20 DNA MER1_type 0 219 34 2125 111 10 17 chr18 10108721 10109018 -76568530 - AluSg1 SINE Alu -14 295 1 23 33 0 0 chr18 10111198 10111228 -76566320 + AT_rich Low_complexity Low_complexity 1 30 0 241 208 13 13 chr18 10111751 10111828 -76565720 + (TTAA)n Simple_repeat Simple_repeat 2 78 0 207 229 200 0 chr18 10112552 10112622 -76564926 - MIR3 SINE MIR -25 183 100 1810 281 70 36 chr18 10112643 10113316 -76564232 + L1M4b LINE L1 90 785 -6074 239 83 0 28 chr18 10113378 10113414 -76564134 + L1M4b LINE L1 1016 1050 -5809 2710 32 0 3 chr18 10113414 10113761 -76563787 + AluY SINE Alu 1 346 0 296 232 0 0 chr18 10113761 10113817 -76563731 + L1M4b LINE L1 1035 1090 -5769 227 211 77 0 chr18 10113820 10113872 -76563676 + L1M4b LINE L1 1125 1180 -5679 2557 52 7 0 chr18 10113931 10114239 -76563309 + AluY SINE Alu 2 311 0 1940 132 0 35 chr18 10114264 10114583 -76562965 + AluSx SINE Alu 1 308 -4 967 142 0 156 chr18 10117126 10117321 -76560227 + L1MB2 LINE L1 5940 6164 -7 2426 66 0 0 chr18 10117321 10117607 -76559941 - AluY SINE Alu -25 286 1 967 142 0 156 chr18 10117607 10117630 -76559918 + L1MB2 LINE L1 6164 6110 -61 1978 138 21 3 chr18 10117630 10117921 -76559627 + AluSx SINE Alu 1 296 -16 967 142 0 156 chr18 10117921 10117976 -76559572 + L1MB2 LINE L1 6109 6171 0 2194 113 0 10 chr18 10118371 10118671 -76558877 - AluSx SINE Alu -15 297 1 453 213 0 0 chr18 10118688 10118768 -76558780 - L2 LINE L2 0 3313 3234 192 347 8 66 chr18 10121188 10121309 -76556239 + L2 LINE L2 2743 2856 -458 369 266 18 9 chr18 10122179 10122288 -76555260 + HAL1b LINE L1 86 195 -1153 181 356 0 0 chr18 10122663 10122722 -76554826 + L2 LINE L2 3203 3261 -11 21 36 0 0 chr18 10123087 10123115 -76554433 + AT_rich Low_complexity Low_complexity 1 28 0 1114 228 54 24 chr18 10123122 10123630 -76553918 - MLT1E2 LTR MaLR 0 624 1 678 286 74 3 chr18 10123936 10124219 -76553329 + L1ME LINE L1 5504 5806 -315 285 282 0 18 chr18 10125108 10125218 -76552330 - L1M4 LINE L1 -2775 3371 3264 399 130 0 0 chr18 10125218 10125295 -76552253 + (TC)n Simple_repeat Simple_repeat 1 77 0 2517 189 19 93 chr18 10125312 10125732 -76551816 - L1M4 LINE L1 -2890 3256 2806 1889 170 3 0 chr18 10125732 10126021 -76551527 + AluJo SINE Alu 1 290 -22 2517 189 19 93 chr18 10126021 10126259 -76551289 - L1M4 LINE L1 -3340 2806 2662 2156 114 7 7 chr18 10126259 10126566 -76550982 - AluSc SINE Alu -2 307 1 2517 189 19 93 chr18 10126566 10126688 -76550860 - L1M4 LINE L1 -3484 2662 2533 1503 219 12 21 chr18 10126703 10127026 -76550522 - MER74A LTR ERVL -95 463 144 1975 160 33 80 chr18 10127026 10127596 -76549952 - MLT2A2 LTR ERVL 0 554 1 8332 86 13 6 chr18 10127596 10128687 -76548861 - HERVL-A2 LTR ERVL 0 5654 4556 589 167 0 0 chr18 10128687 10128777 -76548771 - MER74A LTR ERVL -410 148 59 1840 124 94 63 chr18 10128779 10128992 -76548556 - THE1C LTR MaLR -2 373 143 2370 105 0 3 chr18 10128992 10129305 -76548243 + AluSq SINE Alu 1 312 -1 1840 124 94 63 chr18 10129305 10129453 -76548095 - THE1C LTR MaLR -232 143 1 4143 127 73 3 chr18 10129453 10130098 -76547450 - THE1C-int LTR MaLR 0 1580 891 321 202 106 11 chr18 10130098 10130192 -76547356 - MER74B LTR ERVL -503 119 17 2145 118 0 10 chr18 10131073 10131408 -76546140 + AluSx SINE Alu 1 312 0 1732 147 45 11 chr18 10131810 10132096 -76545452 - AluSx SINE Alu -16 296 1 2480 74 0 3 chr18 10132704 10133013 -76544535 + AluY SINE Alu 3 310 -1 2518 45 0 0 chr18 10133583 10133871 -76543677 - AluY SINE Alu -15 296 9 332 264 102 54 chr18 10135816 10135983 -76541565 - MIR SINE MIR -25 237 63 198 0 0 0 chr18 10136456 10136478 -76541070 + (T)n Simple_repeat Simple_repeat 1 22 0 1460 244 92 30 chr18 10136637 10137105 -76540443 - MLT1D LTR MaLR 0 505 9 505 256 79 33 chr18 10137189 10137404 -76540144 + MLT1K LTR MaLR 348 572 -16 815 329 137 36 chr18 10138050 10138803 -76538745 + L3 LINE CR1 436 1264 -313 210 348 27 27 chr18 10138795 10138907 -76538641 - MER5B DNA MER1_type -42 136 25 * 182 234 106 0 chr18 10138935 10138982 -76538566 + L3 LINE CR1 1524 1575 -2 21 0 0 0 chr18 10139088 10139109 -76538439 + AT_rich Low_complexity Low_complexity 1 21 0 269 122 54 0 chr18 10139205 10139279 -76538269 + (TA)n Simple_repeat Simple_repeat 2 79 0 266 286 89 54 chr18 10139374 10139542 -76538006 - MER5A DNA MER1_type -3 175 2 2200 97 3 3 chr18 10140691 10140990 -76536558 + AluSg SINE Alu 1 299 -11 2871 208 11 4 chr18 10141362 10141911 -76535637 - MER89 LTR ERV1 0 559 7 1244 275 96 40 chr18 10142132 10142750 -76534798 - HAL1 LINE L1 -107 2400 1749 1562 166 28 31 chr18 10142752 10143042 -76534506 - AluJb SINE Alu -23 289 1 4193 94 17 17 chr18 10143139 10143482 -76534066 - L1PA11 LINE L1 -2 6172 5827 2231 104 3 7 chr18 10143482 10143789 -76533759 - AluSg SINE Alu -4 306 1 4193 94 17 17 chr18 10143789 10144027 -76533521 - L1PA11 LINE L1 -346 5828 5591 7735 45 5 0 chr18 10144068 10145649 -76531899 - L1PA5 LINE L1 0 6154 4567 8778 40 1 2 chr18 10145649 10146704 -76530844 + L1P LINE L1 1692 2745 -3401 1177 290 88 44 chr18 10146691 10147302 -76530246 - HAL1 LINE L1 -1869 638 1 * 327 254 85 85 chr18 10147422 10147587 -76529961 - MIR SINE MIR -48 214 50 2123 103 7 33 chr18 10148566 10148868 -76528680 - AluSc SINE Alu -15 294 1 219 317 165 24 chr18 10149080 10149244 -76528304 - L2 LINE L2 -178 3135 2949 478 290 61 61 chr18 10149401 10149760 -76527788 + MLT1J LTR MaLR 95 453 -58 649 262 129 0 chr18 10149776 10149978 -76527570 - MIR SINE MIR -31 231 4 390 251 116 119 chr18 10150179 10150430 -76527118 + MIR SINE MIR 3 252 -10 184 198 48 127 chr18 10152021 10152147 -76525401 - MIR SINE MIR -29 233 118 619 213 43 92 chr18 10152403 10152449 -76525099 - MIR SINE MIR 0 262 215 1837 164 3 10 chr18 10152449 10152742 -76524806 - AluJb SINE Alu -21 291 1 619 213 43 92 chr18 10152742 10152902 -76524646 - MIR SINE MIR -47 215 66 211 143 18 18 chr18 10153746 10153802 -76523746 + CT-rich Low_complexity Low_complexity 4 59 0 2772 252 45 25 chr18 10154289 10155171 -76522377 + Zaphod DNA AcHobo 61 960 -3071 1392 234 34 14 chr18 10155178 10155473 -76522075 - AluJo SINE Alu -1 301 1 654 227 8 0 chr18 10155495 10155623 -76521925 + MER3 DNA MER1_type 1 129 -80 1270 168 195 24 chr18 10155678 10156047 -76521501 + Zaphod DNA AcHobo 3600 4031 0 723 263 0 54 chr18 10156605 10156810 -76520738 + LTR16C LTR ERVL 298 491 0 342 265 0 0 chr18 10156810 10156878 -76520670 + L2 LINE L2 3204 3271 -1 30 27 0 0 chr18 10157724 10157761 -76519787 + AT_rich Low_complexity Low_complexity 1 37 0 375 274 194 77 chr18 10158467 10159087 -76518461 - L1M2 LINE L1 -5734 1115 424 24 85 0 0 chr18 10159124 10159183 -76518365 + GC_rich Low_complexity Low_complexity 1 59 0 26 50 0 0 chr18 10159284 10159324 -76518224 + GC_rich Low_complexity Low_complexity 1 40 0 324 328 127 62 chr18 10159347 10159948 -76517600 - L1M2 LINE L1 -5646 1203 564 1183 125 0 23 chr18 10161333 10161509 -76516039 + AluJo SINE Alu 120 291 -21 222 376 26 8 chr18 10161766 10161883 -76515665 + L2 LINE L2 3150 3268 -4 2347 84 0 10 chr18 10162316 10162612 -76514936 - AluSc SINE Alu -14 295 3 1101 204 3 15 chr18 10163000 10163280 -76514268 + L1MD3 LINE L1 7637 7986 -9 2146 102 0 3 chr18 10164943 10165265 -76512283 - AluSq SINE Alu 0 321 1 735 237 87 0 chr18 10165272 10165445 -76512103 + MER5A DNA MER1_type 2 189 0 26 64 0 0 chr18 10165825 10165872 -76511676 + AT_rich Low_complexity Low_complexity 1 47 0 2474 57 0 3 chr18 10166124 10166422 -76511126 + AluY SINE Alu 1 297 -14 1354 182 60 56 chr18 10167843 10168145 -76509403 - AluJb SINE Alu -9 303 1 285 157 20 0 chr18 10168343 10168394 -76509154 + L2 LINE L2 3261 3312 -1 185 359 0 0 chr18 10169430 10169494 -76508054 + MIR SINE MIR 48 111 -97 324 48 0 0 chr18 10169509 10169551 -76507997 + (ATG)n Simple_repeat Simple_repeat 2 43 0 1656 135 7 44 chr18 10169551 10169707 -76507841 - AluJo SINE Alu -27 285 144 2602 57 0 0 chr18 10169707 10170008 -76507540 - AluY SINE Alu -10 301 1 1656 135 7 44 chr18 10170008 10170147 -76507401 - AluJo SINE Alu -168 144 1 253 226 0 0 chr18 10170316 10170369 -76507179 - MER116 DNA Mariner -27 53 1 370 167 48 12 chr18 10170590 10170674 -76506874 + MER5A DNA MER1_type 23 109 -80 1528 169 26 40 chr18 10173030 10173332 -76504216 - AluJo SINE Alu -13 299 2 1219 253 115 55 chr18 10173472 10173967 -76503581 - MLT1H LTR MaLR 0 549 25 204 314 121 8 chr18 10174041 10174165 -76503383 + MIR3 SINE MIR 3 140 -68 276 308 11 22 chr18 10175748 10175839 -76501709 + MIR SINE MIR 19 108 -100 202 310 103 0 chr18 10176230 10176317 -76501231 - L2 LINE L2 -22 3250 3155 208 255 0 20 chr18 10176981 10177032 -76500516 + CT-rich Low_complexity Low_complexity 3 52 0 440 242 177 43 chr18 10177319 10177505 -76500043 - MIR SINE MIR 0 262 52 5607 232 123 34 chr18 10178064 10180250 -76497298 - Charlie2a DNA MER1_type -36 2826 432 1506 191 8 0 chr18 10180250 10180507 -76497041 - AluJb SINE Alu -39 273 15 5607 232 123 34 chr18 10180507 10180576 -76496972 - Charlie2a DNA MER1_type -2430 432 371 644 274 119 52 chr18 10181851 10182297 -76495251 + L1ME4a LINE L1 5643 6118 -3 379 336 0 9 chr18 10185227 10185343 -76492205 - MIR3 SINE MIR -52 156 42 2031 113 47 13 chr18 10185586 10185886 -76491662 + AluSx SINE Alu 3 312 0 267 152 0 0 chr18 10187255 10187301 -76490247 - L1ME LINE L1 -539 5582 5537 420 218 0 0 chr18 10187415 10187493 -76490055 + Tigger7 DNA MER2_type 3 80 -625 * 1434 176 38 8 chr18 10187490 10187757 -76489791 - Tigger7 DNA MER2_type -204 346 72 * 2061 133 45 6 chr18 10187752 10188084 -76489464 + Tigger7 DNA MER2_type 2243 2587 0 1736 161 30 3 chr18 10188219 10188517 -76489031 - AluSx SINE Alu -1 311 6 233 270 117 44 chr18 10190968 10191105 -76486443 - MER5A DNA MER1_type 0 189 43 708 277 27 0 chr18 10191444 10191664 -76485884 + MIR SINE MIR 13 238 -24 1418 219 151 31 chr18 10192719 10193170 -76484378 - MLT1D LTR MaLR 0 505 1 452 304 37 6 chr18 10193366 10193527 -76484021 - MIR SINE MIR -77 185 20 242 317 77 19 chr18 10193573 10193677 -76483871 + MIR SINE MIR 43 152 -56 1158 184 5 0 chr18 10193801 10194013 -76483535 - AluJo SINE Alu -14 298 86 28 0 0 0 chr18 10194176 10194204 -76483344 + AT_rich Low_complexity Low_complexity 1 28 0 2227 85 0 3 chr18 10194277 10194599 -76482949 - AluY SINE Alu 0 321 1 1474 130 65 0 chr18 10196452 10196668 -76480880 + MER30 DNA MER1_type 1 230 0 228 304 67 30 chr18 10198478 10198613 -76478935 - MIR SINE MIR -12 250 111 370 259 43 43 chr18 10198820 10198936 -76478612 + MIR SINE MIR 7 122 -140 21 0 0 0 chr18 10200892 10200913 -76476635 + AT_rich Low_complexity Low_complexity 1 21 0 7018 118 73 19 chr18 10201904 10202960 -76474588 + Tigger3b DNA MER2_type 2 1128 -1900 2524 108 48 17 chr18 10202960 10203313 -76474235 + THE1B LTR MaLR 1 364 0 7018 118 73 19 chr18 10203313 10203423 -76474125 + Tigger3b DNA MER2_type 1128 1231 0 226 104 21 21 chr18 10203536 10203584 -76473964 + (TG)n Simple_repeat Simple_repeat 1 48 0 2130 122 0 3 chr18 10204764 10205058 -76472490 + AluSc SINE Alu 1 293 -16 3151 112 97 6 chr18 10207009 10207492 -76470056 - MER1A DNA MER1_type -2 527 1 1232 164 19 27 chr18 10207541 10207797 -76469751 - AluJb SINE Alu -25 287 34 451 261 172 4 chr18 10211114 10211435 -76466113 + MLT1I LTR MaLR 19 409 0 232 268 62 10 chr18 10211990 10212087 -76465461 - MIR SINE MIR -79 183 82 692 161 54 0 chr18 10212278 10212390 -76465158 + FLAM_C SINE Alu 2 119 -24 210 71 0 0 chr18 10212390 10212418 -76465130 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 824 217 156 0 chr18 10212430 10212642 -76464906 - MIR SINE MIR 0 262 18 5450 132 26 11 chr18 10212683 10213539 -76464009 - L1MC1 LINE L1 -15 6318 5450 631 253 99 37 chr18 10214643 10215047 -76462501 - L1ME4a LINE L1 -3 6118 5690 257 361 89 24 chr18 10215434 10215603 -76461945 - MIR3 SINE MIR -27 181 2 671 242 23 82 chr18 10215768 10215865 -76461683 + MIR SINE MIR 33 134 -128 1741 164 36 4 chr18 10215865 10216145 -76461403 - AluJo SINE Alu -20 292 4 671 242 23 82 chr18 10216145 10216266 -76461282 + MIR SINE MIR 134 238 -24 2304 92 0 0 chr18 10216912 10217206 -76460342 - AluSx SINE Alu -18 294 1 899 214 23 59 chr18 10218068 10218288 -76459260 - AluJo SINE Alu -16 296 85 642 106 0 12 chr18 10219437 10219522 -76458026 + AluY SINE Alu 195 278 -33 264 100 0 0 chr18 10219522 10219562 -76457986 + (CA)n Simple_repeat Simple_repeat 1 40 0 389 212 97 18 chr18 10220054 10220167 -76457381 - L2 LINE L2 0 3313 3192 327 270 88 29 chr18 10220165 10220302 -76457246 - MIR SINE MIR -12 250 106 * 185 295 66 0 chr18 10220478 10220539 -76457009 + L3 LINE CR1 1131 1195 -382 349 232 95 0 chr18 10220546 10220641 -76456907 + L3 LINE CR1 1318 1421 -156 309 252 68 29 chr18 10220740 10220843 -76456705 - MER5A DNA MER1_type -24 165 59 204 331 41 35 chr18 10220891 10221036 -76456512 - L2 LINE L2 -356 2957 2812 1354 113 128 0 chr18 10222929 10223133 -76454415 - MER30 DNA MER1_type 0 230 1 473 299 28 7 chr18 10223679 10223823 -76453725 - MIR SINE MIR -114 148 2 209 364 11 0 chr18 10224781 10224869 -76452679 + L2 LINE L2 1315 1403 -1911 548 317 219 18 chr18 10225037 10225539 -76452009 + L2 LINE L2 2355 2957 -357 236 250 21 73 chr18 10225549 10225645 -76451903 + L2 LINE L2 3167 3257 -56 25 0 0 0 chr18 10226626 10226651 -76450897 + AT_rich Low_complexity Low_complexity 1 25 0 205 275 0 110 chr18 10226746 10226837 -76450711 + MIR SINE MIR 182 262 0 2161 133 0 0 chr18 10228261 10228562 -76448986 + AluSx SINE Alu 1 301 -11 334 161 18 0 chr18 10228883 10228939 -76448609 - L2 LINE L2 -1 3312 3256 2073 83 15 0 chr18 10230479 10230745 -76446803 - AluY SINE Alu -41 270 1 2178 107 0 17 chr18 10230767 10231067 -76446481 - AluSq SINE Alu -18 295 1 27 0 0 0 chr18 10231536 10231563 -76445985 + AT_rich Low_complexity Low_complexity 1 27 0 234 294 118 12 chr18 10231719 10231804 -76445744 - MIR3 SINE MIR -28 180 87 300 263 101 10 chr18 10231807 10231906 -76445642 - MLT1K LTR MaLR 0 588 481 449 244 90 39 chr18 10233141 10233297 -76444251 - MIR SINE MIR -10 252 89 231 114 0 0 chr18 10234224 10234259 -76443289 + (A)n Simple_repeat Simple_repeat 1 35 0 29 28 0 0 chr18 10234390 10234426 -76443122 + AT_rich Low_complexity Low_complexity 1 36 0 2297 109 0 3 chr18 10234702 10235014 -76442534 - AluY SINE Alu 0 311 1 26 0 0 0 chr18 10236555 10236581 -76440967 + AT_rich Low_complexity Low_complexity 1 26 0 857 193 97 23 chr18 10239120 10239296 -76438252 - MER5A DNA MER1_type 0 189 1 11257 110 25 28 chr18 10239301 10241011 -76436537 + Tigger1 DNA MER2_type 1 1706 -712 672 118 0 84 chr18 10241019 10241138 -76436410 + AluSg/x SINE Alu 202 310 0 1953 140 22 9 chr18 10241140 10241461 -76436087 + Tigger1 DNA MER2_type 2080 2404 -14 581 309 6 6 chr18 10241463 10241631 -76435917 - MER8 DNA MER2_type -71 168 1 1359 184 77 53 chr18 10242147 10242306 -76435242 + L1MC2 LINE L1 4898 5052 -1144 2005 131 31 0 chr18 10242306 10242596 -76434952 - AluSx SINE Alu -13 299 1 1359 184 77 53 chr18 10242596 10242792 -76434756 + L1MC2 LINE L1 5052 5242 -954 8083 26 0 0 chr18 10242792 10244273 -76433275 + L1PA3 LINE L1 4658 6138 -17 180 0 0 0 chr18 10244273 10244293 -76433255 + (CTA)n Simple_repeat Simple_repeat 1 20 0 1359 184 77 53 chr18 10244293 10244486 -76433062 + L1MC2 LINE L1 5241 5450 -746 1588 145 0 79 chr18 10244492 10244687 -76432861 - AluJb SINE Alu 0 328 167 6320 104 20 22 chr18 10244687 10245693 -76431855 - L1PA13 LINE L1 -2 6161 5154 851 109 86 0 chr18 10245693 10245821 -76431727 + MER85 DNA T2_type 1 139 0 6320 104 20 22 chr18 10245821 10246577 -76430971 - L1PA13 LINE L1 -1009 5154 4398 1588 145 0 79 chr18 10246577 10246729 -76430819 - AluJb SINE Alu -161 167 5 2849 170 38 2 chr18 10246732 10247239 -76430309 + L1MC2 LINE L1 5448 5972 -372 2749 182 92 40 chr18 10247284 10247954 -76429594 + L1MB3 LINE L1 5479 6183 0 622 170 27 54 chr18 10247955 10248102 -76429446 + L1MC2 LINE L1 5962 6104 -240 1745 146 75 0 chr18 10249273 10249554 -76427994 - L1MA9 LINE L1 -5 6307 6006 285 29 0 0 chr18 10249704 10249738 -76427810 + (TA)n Simple_repeat Simple_repeat 1 34 0 903 293 58 39 chr18 10250224 10250490 -76427058 + L2 LINE L2 2823 3104 -209 351 0 0 0 chr18 10250490 10250529 -76427019 + (CA)n Simple_repeat Simple_repeat 2 40 0 903 293 58 39 chr18 10250529 10250744 -76426804 + L2 LINE L2 3104 3313 0 431 273 32 82 chr18 10250779 10250999 -76426549 + L2 LINE L2 3104 3312 -1 1920 152 17 0 chr18 10251431 10251727 -76425821 + AluSx SINE Alu 1 301 -11 1439 143 0 5 chr18 10252156 10252373 -76425175 + AluSg/x SINE Alu 95 310 0 1695 164 0 60 chr18 10253298 10253597 -76423951 - AluJo SINE Alu -20 292 12 3943 99 23 2 chr18 10253643 10254210 -76423338 + L1MA3 LINE L1 5703 6281 -24 470 192 67 19 chr18 10254702 10254806 -76422742 - L2 LINE L2 -5 3308 3200 521 260 20 20 chr18 10254850 10254996 -76422552 - MLT1G1 LTR MaLR 0 595 450 2410 269 124 13 chr18 10255005 10255844 -76421704 - MER45C DNA AcHobo -20 933 2 880 231 45 48 chr18 10255890 10256159 -76421389 - MLT1G1 LTR MaLR -225 370 103 588 222 39 53 chr18 10256240 10256447 -76421101 - L2 LINE L2 -886 2428 2225 2187 105 11 0 chr18 10257017 10257303 -76420245 + AluSc SINE Alu 1 289 -20 268 280 0 30 chr18 10257558 10257658 -76419890 + CT-rich Low_complexity Low_complexity 1 97 0 646 240 229 39 chr18 10259818 10260383 -76417165 + L2 LINE L2 2638 3313 0 2221 93 0 65 chr18 10261094 10261416 -76416132 - AluSq SINE Alu -12 301 1 1067 178 162 1 chr18 10261416 10261696 -76415852 - MER33 DNA MER1_type -28 296 1 292 266 92 0 chr18 10264153 10264262 -76413286 - MER91C DNA MER1_type -1 139 21 301 304 65 55 chr18 10264936 10265153 -76412395 + HAL1b LINE L1 66 284 -1064 330 310 74 26 chr18 10265180 10265451 -76412097 - L2 LINE L2 -1347 1967 1684 690 244 24 6 chr18 10265498 10265666 -76411882 - MER5B DNA MER1_type -4 174 4 2130 131 0 7 chr18 10267111 10267409 -76410139 - AluSx SINE Alu -16 296 1 549 44 0 0 chr18 10268000 10268068 -76409480 + (TG)n Simple_repeat Simple_repeat 1 68 0 551 288 202 27 chr18 10269067 10269404 -76408144 + L2 LINE L2 2916 3311 -2 444 258 23 23 chr18 10269624 10269756 -76407792 - MER94 DNA DNA 0 134 3 486 313 125 14 chr18 10270110 10270462 -76407086 - L1ME4a LINE L1 -283 5838 5448 2090 138 0 0 chr18 10270759 10271057 -76406491 + AluSx SINE Alu 5 302 -10 1750 178 7 7 chr18 10271245 10271538 -76406010 - AluJo SINE Alu -19 293 1 189 0 0 0 chr18 10272569 10272590 -76404958 + (TAA)n Simple_repeat Simple_repeat 2 22 0 260 250 205 18 chr18 10272624 10272736 -76404812 - MIR SINE MIR -61 201 69 546 267 99 16 chr18 10273362 10273553 -76403995 - MIR SINE MIR -40 222 16 1774 155 10 32 chr18 10274536 10274845 -76402703 - AluJo SINE Alu -10 302 1 1601 245 108 2 chr18 10275047 10275508 -76402040 - MLT1E2 LTR MaLR 0 626 117 870 153 29 0 chr18 10275524 10275661 -76401887 + FRAM SINE Alu 1 139 -37 223 68 0 45 chr18 10275669 10275713 -76401835 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 3630 161 15 28 chr18 10275715 10276386 -76401162 - L1MB1 LINE L1 -9 6159 5498 494 248 0 23 chr18 10277251 10277384 -76400164 - LTR67 LTR ERVL 0 557 428 24 0 0 0 chr18 10278749 10278773 -76398775 + AT_rich Low_complexity Low_complexity 1 24 0 2371 95 3 0 chr18 10279151 10279447 -76398101 - AluSc SINE Alu -12 297 1 23 0 0 0 chr18 10279447 10279470 -76398078 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 10281169 10281193 -76396355 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr18 10282482 10282505 -76395043 + AT_rich Low_complexity Low_complexity 1 23 0 186 293 61 12 chr18 10282750 10282832 -76394716 + L2 LINE L2 3186 3271 -1 1013 174 0 113 chr18 10282997 10283244 -76394304 + AluJo SINE Alu 1 219 -93 502 241 17 17 chr18 10283708 10283824 -76393724 + AluJb SINE Alu 173 288 -24 384 298 124 22 chr18 10284575 10284753 -76392795 - MIR SINE MIR -39 223 28 2099 124 0 0 chr18 10285770 10286060 -76391488 - AluSx SINE Alu -17 295 6 22 35 0 0 chr18 10286177 10286206 -76391342 + AT_rich Low_complexity Low_complexity 1 29 0 451 312 124 3 chr18 10286293 10286488 -76391060 - MIR SINE MIR -32 230 21 213 39 0 0 chr18 10288728 10288754 -76388794 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 811 275 59 31 chr18 10289924 10290281 -76387267 - L1ME LINE L1 -439 5682 5337 2120 107 76 13 chr18 10290281 10290598 -76386950 + MER1B DNA MER1_type 1 337 0 811 275 59 31 chr18 10290598 10290741 -76386807 - L1ME LINE L1 -784 5337 5200 1944 128 62 3 chr18 10290741 10291030 -76386518 - AluSx SINE Alu -6 306 1 811 275 59 31 chr18 10291030 10291311 -76386237 - L1ME LINE L1 -921 5200 4882 200 266 165 0 chr18 10291701 10291780 -76385768 + MIR SINE MIR 139 230 -32 22 35 0 0 chr18 10291867 10291896 -76385652 + AT_rich Low_complexity Low_complexity 1 29 0 2082 141 0 0 chr18 10292013 10292318 -76385230 + AluSx SINE Alu 6 310 -2 385 298 124 22 chr18 10293319 10293497 -76384051 + MIR SINE MIR 28 223 -39 464 241 17 17 chr18 10294248 10294364 -76383184 - AluJb SINE Alu -24 288 173 1029 174 0 113 chr18 10294862 10295109 -76382439 - AluJo SINE Alu -93 219 1 187 293 61 12 chr18 10295274 10295356 -76382192 - L2 LINE L2 -1 3271 3186 23 0 0 0 chr18 10295601 10295624 -76381924 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 10296913 10296937 -76380611 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr18 10298636 10298659 -76378889 + AT_rich Low_complexity Low_complexity 1 23 0 2374 95 3 0 chr18 10298659 10298955 -76378593 + AluSc SINE Alu 1 297 -12 24 0 0 0 chr18 10299333 10299357 -76378191 + AT_rich Low_complexity Low_complexity 1 24 0 439 248 0 23 chr18 10300722 10300855 -76376693 + LTR67 LTR ERVL 428 557 0 3307 160 14 19 chr18 10301748 10302391 -76375157 + L1MB1 LINE L1 5520 6159 -9 223 68 0 45 chr18 10302393 10302437 -76375111 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 872 153 29 0 chr18 10302445 10302582 -76374966 - FRAM SINE Alu -37 139 1 1418 254 91 2 chr18 10302619 10303059 -76374489 + MLT1E2 LTR MaLR 148 626 0 1777 156 10 32 chr18 10303261 10303569 -76373979 + AluJo SINE Alu 1 301 -11 552 267 99 16 chr18 10304552 10304743 -76372805 + MIR SINE MIR 16 222 -40 264 250 205 18 chr18 10305369 10305481 -76372067 + MIR SINE MIR 69 201 -61 189 0 0 0 chr18 10305515 10305536 -76372012 + (TTA)n Simple_repeat Simple_repeat 2 22 0 1769 178 7 7 chr18 10306567 10306860 -76370688 + AluJo SINE Alu 1 293 -19 2100 138 0 0 chr18 10307048 10307346 -76370202 - AluSx SINE Alu -10 302 5 376 311 132 12 chr18 10307641 10307975 -76369573 + L1MC/D LINE L1 5443 5816 -1992 390 258 23 23 chr18 10308349 10308481 -76369067 + MER94 DNA DNA 3 134 0 880 124 0 0 chr18 10308517 10308638 -76368910 - AluSq/x SINE Alu -187 126 6 22 35 0 0 chr18 10308755 10308784 -76368764 + AT_rich Low_complexity Low_complexity 1 29 0 448 321 125 0 chr18 10308870 10309054 -76368494 - MIR SINE MIR -32 230 24 213 39 0 0 chr18 10311305 10311331 -76366217 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 811 275 59 31 chr18 10312501 10312858 -76364690 - L1ME LINE L1 -439 5682 5337 2120 107 76 13 chr18 10312858 10313175 -76364373 + MER1B DNA MER1_type 1 337 0 811 275 59 31 chr18 10313175 10313318 -76364230 - L1ME LINE L1 -784 5337 5200 1944 128 62 3 chr18 10313318 10313607 -76363941 - AluSx SINE Alu -6 306 1 811 275 59 31 chr18 10313607 10313888 -76363660 - L1ME LINE L1 -921 5200 4882 1798 168 50 0 chr18 10314624 10314921 -76362627 + AluJb SINE Alu 1 312 0 2121 129 0 0 chr18 10314938 10315233 -76362315 + AluSc SINE Alu 1 295 -14 2141 102 3 3 chr18 10315233 10315518 -76362030 + AluSc SINE Alu 1 285 -24 405 309 143 32 chr18 10315535 10315624 -76361924 + HAL1 LINE L1 1413 1491 -1016 14582 89 16 4 chr18 10315624 10318505 -76359043 - L1PA7 LINE L1 -1 6153 3229 405 309 143 32 chr18 10318505 10318632 -76358916 + HAL1 LINE L1 1491 1653 -854 23 54 0 0 chr18 10318683 10318720 -76358828 + AT_rich Low_complexity Low_complexity 1 37 0 595 103 34 0 chr18 10319186 10319303 -76358245 + (TCTA)n Simple_repeat Simple_repeat 2 122 0 215 56 56 0 chr18 10319592 10319628 -76357920 + CT-rich Low_complexity Low_complexity 3 40 0 653 219 0 0 chr18 10319634 10319757 -76357791 - FLAM_A SINE Alu -2 140 18 259 140 44 26 chr18 10319866 10319980 -76357568 + (TA)n Simple_repeat Simple_repeat 1 116 0 1689 200 3 19 chr18 10320232 10320547 -76357001 + AluJb SINE Alu 1 310 -2 1400 225 40 0 chr18 10321271 10321384 -76356164 + AluJo SINE Alu 7 114 -198 180 0 0 0 chr18 10321384 10321404 -76356144 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1400 225 40 0 chr18 10321404 10321566 -76355982 + AluJo SINE Alu 114 293 -19 311 293 60 67 chr18 10321690 10321840 -76355708 + MIR3 SINE MIR 56 204 -4 342 211 0 0 chr18 10322956 10323032 -76354516 - L1PBa LINE L1 -6500 363 288 * 7961 206 23 3 chr18 10323028 10324721 -76352827 + L1PB2 LINE L1 2688 4425 -1721 195 42 0 0 chr18 10324721 10324745 -76352803 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 7961 206 23 3 chr18 10324745 10324936 -76352612 + L1PB2 LINE L1 4425 4611 -1535 28412 116 20 66 chr18 10324942 10331002 -76346546 + L1P3 LINE L1 1 5765 -389 1214 210 95 162 chr18 10331002 10331937 -76345611 + LTR28 LTR ERV1 2 1020 0 5275 152 28 2 chr18 10331937 10333440 -76344108 + L1PB2 LINE L1 4603 6142 -9 22 0 0 0 chr18 10333450 10333472 -76344076 + AT_rich Low_complexity Low_complexity 1 22 0 353 310 76 21 chr18 10333531 10333821 -76343727 + L1MC/D LINE L1 4019 4324 -1822 619 219 8 8 chr18 10333823 10333946 -76343602 + FLAM_A SINE Alu 1 123 -10 250 319 42 0 chr18 10333982 10334148 -76343400 + L1MC/D LINE L1 4487 4659 -1487 4301 179 43 10 chr18 10334382 10335745 -76341803 - L1MB2 LINE L1 -4 6167 4758 2373 182 32 12 chr18 10335746 10336252 -76341296 - L1MC2 LINE L1 -17 6327 5812 228 310 16 0 chr18 10336254 10336383 -76341165 + L1MC/D LINE L1 4889 5019 -1127 302 254 24 101 chr18 10336483 10336652 -76340896 + L1MC/D LINE L1 5097 5252 -894 487 253 28 11 chr18 10336654 10336832 -76340716 + L1MC/D LINE L1 5255 5435 -2373 253 338 46 7 chr18 10337273 10337424 -76340124 + L1MC/D LINE L1 5437 5593 -2215 299 302 70 9 chr18 10337603 10337818 -76339730 + LTR16C LTR ERVL 247 474 -17 391 241 0 0 chr18 10339202 10339289 -76338259 - L1MC2 LINE L1 -653 5531 5445 1283 206 133 96 chr18 10339289 10340047 -76337501 + LTR1B LTR ERV1 1 983 -37 632 179 77 38 chr18 10340109 10340348 -76337200 - L1MC2 LINE L1 -730 5448 5202 24 32 0 0 chr18 10340348 10340379 -76337169 + AT_rich Low_complexity Low_complexity 1 31 0 308 396 50 12 chr18 10340496 10340736 -76336812 - L3 LINE CR1 -362 1215 967 312 282 13 0 chr18 10340812 10340890 -76336658 + L3 LINE CR1 850 928 -649 644 263 61 35 chr18 10340965 10341163 -76336385 + L3 LINE CR1 1369 1571 -6 523 284 39 67 chr18 10341730 10341962 -76335586 - MIR SINE MIR -10 252 27 1482 169 40 11 chr18 10342144 10342422 -76335126 - MER61D LTR ERV1 0 501 216 250 132 0 0 chr18 10342477 10342515 -76335033 - MER61B LTR ERV1 -286 139 102 * 708 230 11 11 chr18 10342492 10342670 -76334878 - LTR28 LTR ERV1 -842 178 1 1644 170 52 0 chr18 10342832 10343102 -76334446 - AluJo SINE Alu -15 297 14 375 301 66 42 chr18 10345359 10345525 -76332023 - MIR3 SINE MIR -6 202 33 446 242 69 71 chr18 10345958 10346365 -76331183 - MLT1J LTR MaLR -4 507 53 36 23 0 0 chr18 10346375 10346418 -76331130 + AT_rich Low_complexity Low_complexity 1 43 0 1731 179 7 10 chr18 10346419 10346710 -76330838 - AluJo SINE Alu -22 290 1 2073 149 27 17 chr18 10346866 10346973 -76330575 - MER61C LTR ERV1 0 434 330 4434 68 5 5 chr18 10346973 10347560 -76329988 - L1PA8 LINE L1 -1 6171 5585 2073 149 27 17 chr18 10347560 10347862 -76329686 - MER61C LTR ERV1 -104 330 21 3780 140 74 97 chr18 10348846 10349039 -76328509 + MER4D LTR ERV1 2 198 -705 1945 144 0 20 chr18 10349039 10349331 -76328217 + AluSx SINE Alu 1 286 -26 3780 140 74 97 chr18 10349331 10350061 -76327487 + MER4D LTR ERV1 198 903 0 245 232 29 0 chr18 10350142 10350211 -76327337 - Charlie8 DNA MER1_type -2219 198 128 2234 108 3 22 chr18 10350212 10350361 -76327187 - AluSx SINE Alu -3 309 159 3946 50 19 0 chr18 10350361 10350842 -76326706 - LTR2B LTR ERV1 0 490 1 2234 108 3 22 chr18 10350842 10351007 -76326541 - AluSx SINE Alu -153 159 1 180 0 0 0 chr18 10351018 10351038 -76326510 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1611 117 124 4 chr18 10351041 10351298 -76326250 - AluSg SINE Alu -12 288 1 6306 99 6 29 chr18 10352010 10352346 -76325202 - HSMAR1 DNA Mariner 0 1287 945 2495 37 0 20 chr18 10352346 10352644 -76324904 - AluY SINE Alu -19 292 1 6306 99 6 29 chr18 10352644 10353250 -76324298 - HSMAR1 DNA Mariner -342 945 366 1371 85 85 0 chr18 10353249 10353461 -76324087 - HSMAR1 DNA Mariner -1054 233 4 * 547 204 193 6 chr18 10353868 10354044 -76323504 - MER3 DNA MER1_type 0 209 1 2378 124 20 32 chr18 10354198 10354317 -76323231 - LTR56 LTR ERV1 0 445 326 186 43 0 0 chr18 10354317 10354340 -76323208 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1546 206 7 4 chr18 10354342 10354623 -76322925 - AluJo SINE Alu -30 282 1 2378 124 20 32 chr18 10354623 10354942 -76322606 - LTR56 LTR ERV1 -120 325 9 183 268 0 54 chr18 10355073 10355129 -76322419 - L2 LINE L2 -541 2773 2721 833 144 0 15 chr18 10356462 10356594 -76320954 + AluJb SINE Alu 3 132 -180 21 0 0 0 chr18 10356781 10356802 -76320746 + AT_rich Low_complexity Low_complexity 1 21 0 247 267 89 22 chr18 10356847 10356937 -76320611 - MIR SINE MIR -49 213 118 312 279 38 98 chr18 10357056 10357239 -76320309 + MIR SINE MIR 61 232 -30 363 245 7 109 chr18 10358407 10358554 -76318994 + L2 LINE L2 3182 3313 0 464 277 73 17 chr18 10358899 10359076 -76318472 + MIR SINE MIR 11 197 -65 807 288 74 23 chr18 10359790 10360338 -76317210 + L1MEd LINE L1 965 1574 -4736 2284 128 0 0 chr18 10360363 10360669 -76316879 - AluSx SINE Alu -6 306 1 2123 177 27 42 chr18 10361305 10361779 -76315769 - MLT1C LTR MaLR 0 467 1 634 258 54 59 chr18 10361955 10362042 -76315506 + MLT1J LTR MaLR 71 157 -354 750 236 94 0 chr18 10362042 10362233 -76315315 + MER3 DNA MER1_type 1 209 0 634 258 54 59 chr18 10362233 10362552 -76314996 + MLT1J LTR MaLR 157 475 -36 194 386 20 10 chr18 10365343 10365444 -76312104 + MIR3 SINE MIR 67 168 -40 240 315 74 80 chr18 10365451 10365613 -76311935 + MIR SINE MIR 32 192 -70 21 57 0 0 chr18 10366247 10366282 -76311266 + AT_rich Low_complexity Low_complexity 1 35 0 2093 86 3 68 chr18 10366321 10366645 -76310903 - AluSx SINE Alu -9 303 1 207 146 0 0 chr18 10367216 10367257 -76310291 + (TA)n Simple_repeat Simple_repeat 2 42 0 355 320 113 36 chr18 10367292 10367514 -76310034 + MIR SINE MIR 13 251 -11 385 289 46 33 chr18 10371910 10372062 -76305486 - MER5A DNA MER1_type -27 162 9 183 195 0 24 chr18 10374217 10374258 -76303290 - L3 LINE CR1 -13 1564 1525 273 197 0 45 chr18 10374534 10374600 -76302948 + (TAGG)n Simple_repeat Simple_repeat 1 63 0 222 322 100 0 chr18 10374793 10374883 -76302665 - MIR3 SINE MIR -105 103 5 264 324 53 106 chr18 10375926 10376398 -76301150 - L2 LINE L2 -8 3264 2818 23 0 0 0 chr18 10377853 10377876 -76299672 + AT_rich Low_complexity Low_complexity 1 23 0 895 184 56 0 chr18 10378452 10378631 -76298917 - MER5A DNA MER1_type 0 189 1 619 290 138 21 chr18 10380156 10380532 -76297016 - LTR41 LTR ERVL -7 766 347 487 237 64 26 chr18 10380607 10380763 -76296785 - LTR41 LTR ERVL -611 162 1 23 0 0 0 chr18 10380787 10380810 -76296738 + AT_rich Low_complexity Low_complexity 1 23 0 1479 212 24 7 chr18 10382125 10382417 -76295131 + AluJo SINE Alu 7 303 -9 2291 101 3 0 chr18 10382553 10382849 -76294699 - AluSp SINE Alu -16 297 1 697 264 34 11 chr18 10383136 10383314 -76294234 + MIR SINE MIR 12 193 -69 200 184 0 0 chr18 10383790 10383828 -76293720 + GA-rich Low_complexity Low_complexity 1 38 0 365 345 52 16 chr18 10384378 10384572 -76292976 - MIR SINE MIR -2 260 60 894 287 70 25 chr18 10385620 10385934 -76291614 + L3 LINE CR1 622 949 -628 385 210 72 58 chr18 10386000 10386138 -76291410 + L3 LINE CR1 1144 1283 -294 903 129 12 12 chr18 10386164 10386334 -76291214 + CT-rich Low_complexity Low_complexity 3 172 0 264 226 0 0 chr18 10386350 10386412 -76291136 + CT-rich Low_complexity Low_complexity 2 63 0 377 300 184 17 chr18 10386412 10386645 -76290903 + L3 LINE CR1 1293 1564 -13 2280 98 20 0 chr18 10387476 10387782 -76289766 - AluSx SINE Alu 0 312 1 180 111 0 0 chr18 10390399 10390426 -76287122 + (T)n Simple_repeat Simple_repeat 1 27 0 1404 232 82 0 chr18 10391141 10391456 -76286092 + MER58B DNA MER1_type 1 341 0 793 182 0 0 chr18 10391770 10391891 -76285657 + FLAM_C SINE Alu 2 122 -21 2080 113 3 55 chr18 10392354 10392682 -76284866 - AluSq SINE Alu -2 311 1 403 306 37 0 chr18 10393698 10393806 -76283742 - L2 LINE L2 -7 3306 3195 251 296 71 31 chr18 10394129 10394227 -76283321 - MIR SINE MIR -71 191 90 308 240 87 10 chr18 10394396 10394500 -76283048 + MIR SINE MIR 44 155 -107 275 299 204 37 chr18 10394495 10394823 -76282725 - L2 LINE L2 -12 3301 2919 * 1174 162 14 19 chr18 10395348 10395564 -76281984 - L1PA16 LINE L1 -1 6165 5951 270 56 0 0 chr18 10396239 10396275 -76281273 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1893 142 25 13 chr18 10396327 10396645 -76280903 - L1MB3 LINE L1 -10 6173 5852 1763 177 17 0 chr18 10397469 10397651 -76279897 - AluJo SINE Alu -7 305 115 348 24 0 0 chr18 10397651 10397692 -76279856 + (TG)n Simple_repeat Simple_repeat 2 42 0 1763 177 17 0 chr18 10397692 10397809 -76279739 - AluJo SINE Alu -197 115 1 2162 156 29 82 chr18 10398162 10398649 -76278899 + MER65C LTR ERV1 1 461 0 197 274 20 0 chr18 10398653 10398704 -76278844 - L2 LINE L2 -21 3292 3241 348 294 126 23 chr18 10399238 10399452 -76278096 + L1MC4 LINE L1 7793 8028 -14 570 278 58 89 chr18 10401246 10401628 -76275920 + MLT1I LTR MaLR 1 370 -39 672 199 7 7 chr18 10401629 10401770 -76275778 - Charlie1 DNA MER1_type -1 2760 2620 * 715 245 142 0 chr18 10401751 10401963 -76275585 - Charlie1 DNA MER1_type -2519 242 1 1817 151 7 18 chr18 10402942 10403226 -76274322 + AluJo SINE Alu 1 281 -31 21 0 0 0 chr18 10404915 10404936 -76272612 + AT_rich Low_complexity Low_complexity 1 21 0 566 231 119 63 chr18 10405234 10405503 -76272045 - MLT1J1 LTR MaLR -13 433 150 27 49 0 0 chr18 10406505 10406546 -76271002 + AT_rich Low_complexity Low_complexity 1 41 0 1420 183 11 11 chr18 10406555 10406828 -76270720 - AluJb SINE Alu 0 312 40 24 0 0 0 chr18 10406858 10406882 -76270666 + AT_rich Low_complexity Low_complexity 1 24 0 513 314 47 0 chr18 10407134 10407303 -76270245 + MIR SINE MIR 58 234 -28 4164 141 48 74 chr18 10407560 10408366 -76269182 + LTR1 LTR ERV1 1 785 0 1837 145 18 11 chr18 10409702 10409984 -76267564 - AluJo SINE Alu 0 312 29 641 102 39 94 chr18 10412069 10412151 -76265397 + L1MB2 LINE L1 6050 6124 -47 2265 103 0 0 chr18 10412151 10412443 -76265105 + AluSg SINE Alu 1 292 -18 641 102 39 94 chr18 10412443 10412487 -76265061 + L1MB2 LINE L1 6124 6169 -2 622 274 93 73 chr18 10412675 10412940 -76264608 - L1M4 LINE L1 -1207 4939 4681 1763 219 24 40 chr18 10412940 10413310 -76264238 - MLT1A1 LTR MaLR 0 365 2 622 274 93 73 chr18 10413310 10413741 -76263807 - L1M4 LINE L1 -1465 4681 4229 311 139 0 0 chr18 10414172 10414215 -76263333 - Tigger3b DNA MER2_type 0 1231 1189 7273 131 43 14 chr18 10414565 10415760 -76261788 - Tigger3b DNA MER2_type -1 1230 1 715 208 91 7 chr18 10415760 10415914 -76261634 + MER3 DNA MER1_type 43 209 0 276 330 87 97 chr18 10416695 10417016 -76260532 - L2 LINE L2 -2 3270 2953 1704 213 103 24 chr18 10417029 10417485 -76260063 - MLT1D LTR MaLR -13 492 1 188 114 29 0 chr18 10417872 10417907 -76259641 + L3 LINE CR1 636 671 -906 860 281 125 24 chr18 10417948 10418283 -76259265 - MLT1K LTR MaLR -65 523 155 22 35 0 0 chr18 10418606 10418635 -76258913 + AT_rich Low_complexity Low_complexity 1 29 0 288 226 68 75 chr18 10420165 10420311 -76257237 + L1MEd LINE L1 627 771 -5348 302 277 156 21 chr18 10423150 10423291 -76254257 + MIR SINE MIR 90 249 -13 1361 225 3 28 chr18 10425278 10425567 -76251981 - AluJo SINE Alu -30 282 1 276 264 39 106 chr18 10427455 10427766 -76249782 - L1MEd LINE L1 -4863 1256 967 191 204 111 0 chr18 10428149 10428203 -76249345 - L2 LINE L2 -11 3261 3202 1063 107 0 7 chr18 10428742 10428892 -76248656 + LOR1b LTR ERV1 1 149 -312 * 2475 152 24 12 chr18 10428884 10429304 -76248244 + LOR1a LTR ERV1 68 492 -5 826 200 11 65 chr18 10429439 10429624 -76247924 + FAM SINE Alu 1 175 0 1557 243 40 46 chr18 10430221 10430875 -76246673 - Charlie2 DNA MER1_type -6 2856 2207 2205 120 0 0 chr18 10430878 10431177 -76246371 - AluSx SINE Alu -13 299 1 3824 153 94 69 chr18 10433022 10433788 -76243760 + LTR1 LTR ERV1 1 785 0 3164 186 9 20 chr18 10435368 10435921 -76241627 - MER44D DNA MER2_type -2 603 2 729 150 107 7 chr18 10436848 10436988 -76240560 - MER20 DNA MER1_type -65 154 1 2091 148 71 27 chr18 10437327 10437841 -76239707 + MLT2A2 LTR ERVL 1 554 0 281 272 65 11 chr18 10439112 10439204 -76238344 + MER119 DNA MER1_type 1 97 -486 483 254 32 8 chr18 10439226 10439352 -76238196 + MER119 DNA MER1_type 455 583 0 306 291 109 9 chr18 10439653 10439763 -76237785 - L2 LINE L2 0 3313 3193 405 248 0 38 chr18 10439793 10439898 -76237650 - MIR SINE MIR -22 240 140 266 229 166 32 chr18 10440534 10440691 -76236857 - L1ME4a LINE L1 0 6121 5944 1625 185 13 26 chr18 10440714 10441022 -76236526 + AluJb SINE Alu 1 304 -8 198 118 0 0 chr18 10442124 10442158 -76235390 + (T)n Simple_repeat Simple_repeat 1 34 0 1651 37 0 5 chr18 10442160 10442350 -76235198 - L1PA4 LINE L1 -3 6152 5964 195 42 0 0 chr18 10443721 10443745 -76233803 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 409 277 98 22 chr18 10444042 10444226 -76233322 + MLT1K LTR MaLR 33 230 -358 979 148 20 0 chr18 10444271 10444420 -76233128 - Tigger3(Golem) DNA MER2_type -1 3028 2877 244 167 0 194 chr18 10444421 10444493 -76233055 - Tigger3(Golem) DNA MER2_type -2970 59 2 233 260 42 31 chr18 10444697 10444793 -76232755 + MLT1K LTR MaLR 460 556 -32 21 0 0 0 chr18 10445197 10445218 -76232330 + AT_rich Low_complexity Low_complexity 1 21 0 8518 137 33 16 chr18 10445389 10447354 -76230194 - L1MA2 LINE L1 -4 6300 4282 2201 116 0 0 chr18 10447354 10447687 -76229861 + AluSq SINE Alu 1 333 0 8518 137 33 16 chr18 10447687 10448288 -76229260 - L1MA2 LINE L1 -2022 4282 3693 2027 146 67 29 chr18 10449252 10449628 -76227920 - MLT1B LTR MaLR 0 390 1 193 152 0 0 chr18 10449843 10449876 -76227672 - MIR SINE MIR -146 62 30 2383 100 0 0 chr18 10449923 10450233 -76227315 - AluSx SINE Alu -2 310 1 417 317 52 22 chr18 10450405 10450635 -76226913 - MIR SINE MIR -13 249 13 296 211 11 53 chr18 10451237 10451332 -76226216 + CT-rich Low_complexity Low_complexity 5 95 0 232 341 8 30 chr18 10451642 10451774 -76225774 + L3b LINE CR1 1370 1498 -85 19192 163 40 37 chr18 10454150 10454956 -76222592 - L1 LINE L1 -2923 4642 3840 311 0 26 0 chr18 10454956 10454995 -76222553 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 19192 163 40 37 chr18 10454995 10456578 -76220970 - L1 LINE L1 -3725 3840 2263 2014 118 43 0 chr18 10456578 10456858 -76220690 - AluSx SINE Alu -20 292 1 19192 163 40 37 chr18 10456858 10457163 -76220385 - L1 LINE L1 -5302 2263 1960 2596 117 25 5 chr18 10457163 10457531 -76220017 - THE1C LTR MaLR 0 375 1 19192 163 40 37 chr18 10457531 10459396 -76218152 - L1 LINE L1 -5605 1960 62 240 173 0 58 chr18 10460120 10460172 -76217376 + MARNA DNA Mariner 199 247 -339 2480 74 0 10 chr18 10460400 10460711 -76216837 - AluY SINE Alu -3 308 1 289 239 51 43 chr18 10461412 10461529 -76216019 - MIR SINE MIR -1 261 144 1440 128 36 110 chr18 10461530 10461897 -76215651 + MLT2C2 LTR ERVL 1 349 -48 303 284 12 0 chr18 10461939 10462020 -76215528 + L1MC4 LINE L1 6614 6695 -1347 192 200 0 0 chr18 10462025 10462065 -76215483 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr18 10462065 10462098 -76215450 + (GA)n Simple_repeat Simple_repeat 2 34 0 304 119 17 34 chr18 10462138 10462197 -76215351 + MLT2B2 LTR ERVL 458 515 0 454 333 58 0 chr18 10462197 10462335 -76215213 - MIR SINE MIR -115 147 2 1275 246 127 45 chr18 10462824 10463348 -76214200 - MLT1G1 LTR MaLR 0 567 9 476 251 45 121 chr18 10463356 10463711 -76213837 - MLT1G1-int LTR MaLR -6 1365 1038 292 299 0 77 chr18 10463923 10464040 -76213508 - MLT1G1-int LTR MaLR -507 864 757 1083 273 107 34 chr18 10464905 10465290 -76212258 - LTR16A LTR ERVL -2 448 36 1809 170 7 0 chr18 10466290 10466584 -76210964 - AluJb SINE Alu -16 296 1 574 231 33 44 chr18 10466585 10466767 -76210781 - MLT1K LTR MaLR -46 542 363 1538 158 48 24 chr18 10467619 10467911 -76209637 + AluJb SINE Alu 11 309 -3 400 239 174 13 chr18 10469069 10469224 -76208324 - MIR SINE MIR -42 220 41 353 289 110 56 chr18 10469808 10470254 -76207294 + L1MEd LINE L1 543 1012 -5107 871 275 89 45 chr18 10470264 10470890 -76206658 + L1MEd LINE L1 1053 1706 -4604 325 292 86 33 chr18 10470920 10471412 -76206136 + L1MEd LINE L1 1771 2286 -3843 1399 178 25 71 chr18 10471412 10471558 -76205990 + AluJo SINE Alu 1 152 -160 2054 86 11 4 chr18 10471558 10471825 -76205723 + AluY SINE Alu 36 304 -7 1399 178 25 71 chr18 10471825 10472004 -76205544 + AluJo SINE Alu 152 311 -1 325 292 86 33 chr18 10472004 10472189 -76205359 + L1MEd LINE L1 2286 2460 -3669 380 240 224 16 chr18 10474110 10474302 -76203246 - L3b LINE CR1 -89 1494 1263 199 306 59 35 chr18 10474672 10474757 -76202791 + MIR SINE MIR 108 194 -68 1806 162 10 17 chr18 10475577 10475874 -76201674 + AluJo SINE Alu 1 295 -17 1539 165 24 30 chr18 10477392 10477689 -76199859 + AluJo SINE Alu 1 295 -17 24 0 0 0 chr18 10477741 10477765 -76199783 + AT_rich Low_complexity Low_complexity 1 24 0 227 323 204 0 chr18 10477916 10478009 -76199539 - L2 LINE L2 -18 3295 3184 198 169 28 14 chr18 10478291 10478362 -76199186 + (TA)n Simple_repeat Simple_repeat 2 73 0 2179 127 0 0 chr18 10479186 10479486 -76198062 - AluSx SINE Alu -8 304 5 22 0 0 0 chr18 10480583 10480605 -76196943 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr18 10480885 10480909 -76196639 + (GA)n Simple_repeat Simple_repeat 1 24 0 1270 223 77 87 chr18 10481155 10481652 -76195896 - Charlie4a DNA MER1_type 0 508 17 32179 108 11 57 chr18 10482326 10488768 -76188780 - L1PA7 LINE L1 -6 6148 12 271 307 153 27 chr18 10490562 10490712 -76186836 + L2 LINE L2 3104 3272 0 21 0 0 0 chr18 10491504 10491525 -76186023 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr18 10492091 10492120 -76185428 + AT_rich Low_complexity Low_complexity 1 29 0 389 244 267 17 chr18 10492513 10492693 -76184855 + MIR SINE MIR 31 255 -7 2191 108 7 10 chr18 10494028 10494333 -76183215 + AluSx SINE Alu 1 304 -8 2053 106 0 7 chr18 10494569 10494844 -76182704 - AluSg SINE Alu -37 273 1 1841 169 33 9 chr18 10495000 10495337 -76182211 - MER7A DNA MER2_type -1 345 3 282 56 0 0 chr18 10495337 10495373 -76182175 + (TG)n Simple_repeat Simple_repeat 1 36 0 26 64 0 0 chr18 10495577 10495624 -76181924 + AT_rich Low_complexity Low_complexity 1 47 0 625 276 130 0 chr18 10495638 10495892 -76181656 - MLT1H LTR MaLR -19 530 244 22 35 0 0 chr18 10495961 10495990 -76181558 + AT_rich Low_complexity Low_complexity 1 29 0 693 252 194 22 chr18 10496055 10496277 -76181271 + MIR SINE MIR 2 261 -1 24 32 0 0 chr18 10496400 10496431 -76181117 + AT_rich Low_complexity Low_complexity 1 31 0 333 286 208 21 chr18 10496758 10496950 -76180598 - MIR SINE MIR -27 235 8 206 293 203 23 chr18 10496971 10497104 -76180444 - MIR SINE MIR -34 228 72 2570 113 11 0 chr18 10499069 10499440 -76178108 - THE1C LTR MaLR 0 375 1 2061 120 4 0 chr18 10500379 10500655 -76176893 + AluSq SINE Alu 6 282 -31 944 201 117 40 chr18 10501293 10501591 -76175957 + MER5C DNA MER1_type 4 324 0 1772 163 3 20 chr18 10503080 10503374 -76174174 + AluJb SINE Alu 1 289 -23 2488 87 0 3 chr18 10503861 10504172 -76173376 + AluSq SINE Alu 1 310 -3 264 289 106 42 chr18 10505830 10505986 -76171562 + MIR3 SINE MIR 3 169 -78 760 227 38 0 chr18 10506850 10507035 -76170513 + MER3 DNA MER1_type 1 192 -17 3322 155 44 17 chr18 10507700 10508363 -76169185 + L1PA16 LINE L1 5497 6176 0 1884 178 3 10 chr18 10508546 10508860 -76168688 - AluJo SINE Alu 0 312 1 675 258 37 20 chr18 10509787 10510086 -76167462 + L1ME4a LINE L1 5544 5847 -274 2030 132 0 28 chr18 10510216 10510535 -76167013 + AluJb SINE Alu 1 310 -2 2013 142 0 26 chr18 10510806 10511117 -76166431 + AluSx SINE Alu 1 303 -9 1384 191 55 35 chr18 10511870 10512237 -76165311 - MLT1A2 LTR MaLR 0 374 1 202 28 28 28 chr18 10513226 10513262 -76164286 + (CAAA)n Simple_repeat Simple_repeat 4 39 0 36 0 0 68 chr18 10513502 10513526 -76164022 + AT_rich Low_complexity Low_complexity 1 25 -30 2283 66 3 3 chr18 10513526 10513815 -76163733 + AluY SINE Alu 1 289 -22 36 0 0 68 chr18 10513815 10513849 -76163699 + AT_rich Low_complexity Low_complexity 25 55 0 262 286 113 11 chr18 10514282 10514427 -76163121 + MIR SINE MIR 5 158 -50 2610 209 52 25 chr18 10518035 10518670 -76158878 + MER82 DNA MER2_type 2 653 0 27 0 0 0 chr18 10519000 10519027 -76158521 + AT_rich Low_complexity Low_complexity 1 27 0 1636 181 19 19 chr18 10519331 10519656 -76157892 - MER58B DNA MER1_type -16 325 1 183 156 0 0 chr18 10519766 10519798 -76157750 + (TG)n Simple_repeat Simple_repeat 2 33 0 447 284 129 10 chr18 10519841 10520064 -76157484 + MIR SINE MIR 3 249 -13 2285 91 3 3 chr18 10520589 10520885 -76156663 - AluSc SINE Alu -13 296 1 354 215 11 65 chr18 10522336 10522429 -76155119 + L2 LINE L2 3185 3272 0 2076 202 22 89 chr18 10523353 10524025 -76153523 - L1MD2 LINE L1 0 6242 5616 2318 101 3 0 chr18 10524206 10524514 -76153034 - AluSq SINE Alu -4 309 1 218 282 130 30 chr18 10524854 10524985 -76152563 + L2 LINE L2 2909 3052 -220 243 341 68 36 chr18 10525420 10525640 -76151908 + L2 LINE L2 3045 3271 -1 222 118 0 0 chr18 10526974 10527008 -76150540 + (TG)n Simple_repeat Simple_repeat 1 34 0 536 326 52 17 chr18 10527154 10527501 -76150047 - L1MC/D LINE L1 -2004 5804 5446 5315 207 62 27 chr18 10529339 10529515 -76148033 - L1MB8 LINE L1 -2 6176 6008 4528 94 5 14 chr18 10529515 10530155 -76147393 - MER51A LTR ERV1 0 634 1 5315 207 62 27 chr18 10530155 10531068 -76146480 - L1MB8 LINE L1 -170 6008 5128 2201 112 3 0 chr18 10531068 10531373 -76146175 - AluSx SINE Alu -6 306 1 5315 207 62 27 chr18 10531373 10531737 -76145811 - L1MB8 LINE L1 -1050 5128 4778 2365 66 0 26 chr18 10531737 10532040 -76145508 - AluY SINE Alu -16 295 1 5315 207 62 27 chr18 10532040 10532922 -76144626 - L1MB8 LINE L1 -1400 4778 3766 346 344 25 12 chr18 10533681 10533844 -76143704 + MIR SINE MIR 98 262 0 312 304 59 15 chr18 10534770 10534905 -76142643 - MIR SINE MIR 0 262 122 1544 178 21 0 chr18 10535193 10535480 -76142068 + L1PB4 LINE L1 5863 6155 -1 548 224 35 52 chr18 10535666 10535840 -76141708 - MLT1A1 LTR MaLR -52 313 143 28 48 0 0 chr18 10535840 10535882 -76141666 + AT_rich Low_complexity Low_complexity 1 42 0 2110 145 51 33 chr18 10535882 10536336 -76141212 - L1MA5 LINE L1 -10 6290 5829 234 240 3 15 chr18 10536350 10536430 -76141118 + L1P4 LINE L1 5510 5589 -565 2330 65 0 10 chr18 10536473 10536763 -76140785 + AluY SINE Alu 1 287 -24 4702 152 19 27 chr18 10536770 10537292 -76140256 - L1MA4 LINE L1 -5 6477 5965 315 49 0 0 chr18 10537292 10537333 -76140215 + (TG)n Simple_repeat Simple_repeat 2 42 0 4702 152 19 27 chr18 10537333 10537768 -76139780 - L1MA4 LINE L1 -517 5965 5528 444 108 12 48 chr18 10537765 10537848 -76139700 + L1M3f LINE L1 1104 1183 -4145 * 3622 186 17 4 chr18 10537848 10538624 -76138924 - L1MA4 LINE L1 -818 5510 4725 6248 205 46 17 chr18 10538671 10540603 -76136945 - L1MA4 LINE L1 -3228 3100 1046 2387 84 0 0 chr18 10540603 10540901 -76136647 - AluY SINE Alu -13 298 1 6248 205 46 17 chr18 10540901 10541971 -76135577 - L1MA4 LINE L1 -5282 1046 8 494 197 86 8 chr18 10542137 10542254 -76135294 - MER20 DNA MER1_type -1 218 93 234 172 69 0 chr18 10542709 10542767 -76134781 - LTR48B LTR ERV1 -45 599 538 491 168 75 142 chr18 10543238 10543506 -76134042 - MER31-int LTR ERV1 -209 4727 4478 220 286 357 6 chr18 10544131 10544302 -76133246 + MIR SINE MIR 22 252 -10 204 40 0 0 chr18 10546229 10546254 -76131294 + (TC)n Simple_repeat Simple_repeat 2 26 0 1548 179 44 7 chr18 10546967 10547263 -76130285 - AluJb SINE Alu -5 307 1 469 292 93 25 chr18 10548199 10548238 -76129310 - MER5B DNA MER1_type -5 173 138 195 69 0 0 chr18 10548238 10548267 -76129281 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 469 292 93 25 chr18 10548267 10548388 -76129160 - MER5B DNA MER1_type -40 138 2 2113 128 0 3 chr18 10549301 10549591 -76127957 - AluJb SINE Alu -23 289 1 1963 101 97 0 chr18 10550645 10550923 -76126625 + AluSc SINE Alu 1 305 -4 185 281 16 31 chr18 10551572 10551636 -76125912 - MIR3 SINE MIR -35 173 111 233 250 36 0 chr18 10551718 10551802 -76125746 + (TATATG)n Simple_repeat Simple_repeat 4 90 0 3739 162 61 19 chr18 10552081 10552783 -76124765 + MER44D DNA MER2_type 1 604 -1 238 270 16 16 chr18 10552807 10552870 -76124678 + L2 LINE L2 3207 3269 -3 297 330 128 5 chr18 10553850 10554038 -76123510 - MIR SINE MIR -11 251 41 1036 172 10 5 chr18 10554882 10555074 -76122474 - L1PA15 LINE L1 0 6165 5973 8013 164 83 13 chr18 10555298 10556881 -76120667 + MER52A LTR ERV1 63 1755 0 408 100 0 0 chr18 10556881 10556941 -76120607 - L1MC5 LINE L1 -733 7228 7169 564 293 47 56 chr18 10557047 10557506 -76120042 - L1MC4 LINE L1 -985 6823 6502 472 315 131 33 chr18 10559450 10559847 -76117701 - L2 LINE L2 -31 3282 2847 710 253 33 17 chr18 10560003 10560244 -76117304 + MER46C DNA MER2_type 80 324 -14 426 327 152 41 chr18 10560295 10561056 -76116492 - L3 LINE CR1 -290 1287 442 1311 184 92 43 chr18 10561119 10561226 -76116322 - MER39 LTR ERV1 -4 703 603 2070 135 3 0 chr18 10561226 10561522 -76116026 + AluSg SINE Alu 1 297 -13 1311 184 92 43 chr18 10561522 10561761 -76115787 - MER39 LTR ERV1 -104 603 340 322 256 11 11 chr18 10561878 10561992 -76115556 - MER39 LTR ERV1 -428 114 1 1793 178 135 2 chr18 10562746 10563189 -76114359 - MLT1D LTR MaLR -3 502 1 303 429 52 20 chr18 10563954 10564101 -76113447 + L2 LINE L2 2914 3055 -217 2292 102 54 93 chr18 10564101 10564394 -76113154 + MSTC LTR MaLR 3 275 -153 2176 87 0 39 chr18 10564394 10564703 -76112845 + AluY SINE Alu 1 297 -14 2292 102 54 93 chr18 10564703 10564852 -76112696 + MSTC LTR MaLR 275 428 0 303 429 52 20 chr18 10564852 10565049 -76112499 + L2 LINE L2 3055 3269 -3 204 224 79 26 chr18 10566483 10566559 -76110989 - MIR SINE MIR -79 183 104 342 286 36 56 chr18 10566792 10566988 -76110560 + L2 LINE L2 2858 3049 -223 423 0 0 0 chr18 10567353 10567400 -76110148 + (CA)n Simple_repeat Simple_repeat 2 48 0 236 30 30 0 chr18 10567506 10567539 -76110009 + (GA)n Simple_repeat Simple_repeat 2 35 0 1316 137 84 61 chr18 10569376 10569638 -76107910 + AluJo SINE Alu 24 291 -21 463 266 112 58 chr18 10569708 10569896 -76107652 + MIR SINE MIR 41 238 -24 204 206 0 0 chr18 10570494 10570528 -76107020 + (CAT)n Simple_repeat Simple_repeat 3 36 0 235 257 57 14 chr18 10571109 10571179 -76106369 - MIR SINE MIR -66 142 70 203 299 12 36 chr18 10571295 10571462 -76106086 + (TA)n Simple_repeat Simple_repeat 1 163 0 208 208 42 0 chr18 10571562 10571610 -76105938 + CT-rich Low_complexity Low_complexity 3 52 0 2366 71 30 0 chr18 10571639 10571936 -76105612 + AluY SINE Alu 1 306 -5 2053 134 0 0 chr18 10571946 10572238 -76105310 + AluSx SINE Alu 1 292 -20 204 271 271 0 chr18 10577027 10577112 -76100436 + L3 LINE CR1 191 298 -1279 670 283 29 117 chr18 10577182 10577702 -76099846 + L3 LINE CR1 754 1227 -350 280 258 177 16 chr18 10577727 10577851 -76099697 + L3 LINE CR1 1430 1573 -4 721 327 8 24 chr18 10578166 10578420 -76099128 + MIR SINE MIR 13 262 0 218 288 200 0 chr18 10579556 10579636 -76097912 - L2 LINE L2 -22 3291 3196 279 0 0 0 chr18 10579673 10579704 -76097844 + (TA)n Simple_repeat Simple_repeat 1 31 0 252 0 0 0 chr18 10579703 10579731 -76097817 + (CA)n Simple_repeat Simple_repeat 2 29 0 * 1293 190 12 29 chr18 10579735 10579977 -76097571 + AluJo SINE Alu 45 282 -30 419 151 132 9 chr18 10580114 10580220 -76097328 - L1MB2 LINE L1 -4 6167 6049 1952 157 65 25 chr18 10580225 10580658 -76096890 - L1MA2 LINE L1 -10 6294 5845 182 324 59 37 chr18 10582854 10582990 -76094558 + MIR3 SINE MIR 20 158 -50 222 327 29 29 chr18 10583545 10583649 -76093899 + MIR SINE MIR 30 133 -129 2069 112 6 32 chr18 10584256 10584568 -76092980 - AluSq SINE Alu -9 304 1 24 32 0 0 chr18 10585304 10585335 -76092213 + AT_rich Low_complexity Low_complexity 1 31 0 41118 31 21 1 chr18 10585665 10591697 -76085851 + L1PA2 LINE L1 1 6155 0 192 216 0 0 chr18 10591703 10591754 -76085794 + A-rich Low_complexity Low_complexity 1 51 0 397 296 63 43 chr18 10592319 10592699 -76084849 - L1ME LINE L1 -320 5801 5415 377 286 59 30 chr18 10592741 10592944 -76084604 - L1ME LINE L1 -817 5329 5121 374 248 50 25 chr18 10593440 10593561 -76083987 - L2 LINE L2 0 3313 3190 405 291 50 17 chr18 10593713 10593892 -76083656 - MLT1L LTR MaLR -11 604 420 585 215 52 22 chr18 10594119 10594254 -76083294 - MER5A DNA MER1_type -18 171 33 2533 157 41 11 chr18 10594291 10594755 -76082793 + L1MC1 LINE L1 5446 5923 -410 1312 164 35 118 chr18 10594765 10595112 -76082436 + MER7A DNA MER2_type 11 326 -20 2266 110 3 0 chr18 10595113 10595422 -76082126 + AluSg SINE Alu 1 310 0 1581 179 97 26 chr18 10595456 10595837 -76081711 + L1MC1 LINE L1 5922 6329 -4 241 269 28 97 chr18 10595853 10595998 -76081550 - MLT1L LTR MaLR -478 137 3 2160 103 4 0 chr18 10596312 10596613 -76080935 - AluSq SINE Alu 0 302 1 1952 211 63 39 chr18 10596632 10597139 -76080409 + LTR40a LTR ERVL 1 519 0 1995 141 10 0 chr18 10599604 10599908 -76077640 - AluJo SINE Alu -5 307 1 187 299 65 26 chr18 10599989 10600143 -76077405 + L2 LINE L2 3081 3240 -73 230 241 17 0 chr18 10600403 10600461 -76077087 + L2 LINE L2 3003 3061 -252 6670 142 21 16 chr18 10600861 10602083 -76075465 - Tigger3b DNA MER2_type 0 1231 4 1913 145 69 6 chr18 10602329 10602647 -76074901 + MER1B DNA MER1_type 2 339 0 325 254 138 28 chr18 10603480 10603638 -76073910 - MIR SINE MIR -62 146 16 36 0 0 0 chr18 10603722 10603758 -76073790 + AT_rich Low_complexity Low_complexity 1 36 0 279 0 0 0 chr18 10603797 10603828 -76073720 + (TA)n Simple_repeat Simple_repeat 1 31 0 243 0 0 0 chr18 10603827 10603854 -76073694 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 590 157 0 38 chr18 10603882 10604121 -76073427 + (TA)n Simple_repeat Simple_repeat 1 229 0 312 247 32 21 chr18 10604121 10604214 -76073334 - L1MC4 LINE L1 -1337 6705 6612 715 189 3 29 chr18 10604242 10604871 -76072677 + (TA)n Simple_repeat Simple_repeat 1 612 0 737 154 21 28 chr18 10604874 10605017 -76072531 - L1MA1 LINE L1 -11 6291 6150 608 71 0 6 chr18 10604986 10605087 -76072461 - L1MA1 LINE L1 -164 6141 6044 * 1766 186 71 6 chr18 10605962 10606328 -76071220 + MLT1B LTR MaLR 1 390 0 22 56 0 0 chr18 10606595 10606631 -76070917 + AT_rich Low_complexity Low_complexity 1 36 0 1686 144 7 30 chr18 10607124 10607394 -76070154 + AluJb SINE Alu 4 267 -45 2102 210 18 10 chr18 10607616 10608120 -76069428 - L1MB4 LINE L1 0 6180 5673 2119 134 7 0 chr18 10609119 10609425 -76068123 - AluSx SINE Alu 0 312 5 24 32 0 0 chr18 10609725 10609756 -76067792 + AT_rich Low_complexity Low_complexity 1 31 0 206 260 26 13 chr18 10610608 10610685 -76066863 + GA-rich Low_complexity Low_complexity 4 81 0 2046 146 12 40 chr18 10611858 10612261 -76065287 - MER6 DNA MER2_type 0 865 474 5118 198 53 12 chr18 10612261 10613491 -76064057 + L1M2 LINE L1 1889 3068 -3780 288 0 0 0 chr18 10613491 10613523 -76064025 + (CA)n Simple_repeat Simple_repeat 2 33 0 5118 198 53 12 chr18 10613523 10614562 -76062986 + L1M2 LINE L1 3068 4251 -2597 844 268 61 12 chr18 10664605 10665012 -76012536 + L1M2 LINE L1 5084 5510 -1338 22 0 0 0 chr18 10665146 10665168 -76012380 + AT_rich Low_complexity Low_complexity 1 22 0 610 298 63 17 chr18 10665454 10665816 -76011732 + L1ME3A LINE L1 5264 5642 -524 345 307 13 60 chr18 10665847 10665874 -76011674 - MER5B DNA MER1_type -29 149 122 1778 183 39 0 chr18 10665874 10666207 -76011341 - MER7A DNA MER2_type 0 346 3 345 307 13 60 chr18 10666207 10666329 -76011219 - MER5B DNA MER1_type -56 122 7 438 219 10 10 chr18 10666356 10666452 -76011096 + MER5A DNA MER1_type 14 109 -80 383 315 132 44 chr18 10666671 10666966 -76010582 + L1ME3A LINE L1 5646 5966 -204 219 36 0 0 chr18 10668136 10668164 -76009384 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1393 276 117 29 chr18 10668602 10669731 -76007817 - L2 LINE L2 -1 3312 2047 819 289 87 12 chr18 10669731 10670132 -76007416 - L2 LINE L2 -1591 1723 1293 241 275 119 9 chr18 10673058 10673167 -76004381 + MER5A DNA MER1_type 40 160 -29 318 284 45 74 chr18 10673538 10673714 -76003834 - MIR SINE MIR -55 207 37 235 351 30 15 chr18 10674057 10674188 -76003360 + L3b LINE CR1 1108 1240 -343 1458 188 122 28 chr18 10675337 10675699 -76001849 + MSTD LTR MaLR 1 396 0 374 272 44 29 chr18 10677627 10677763 -75999785 - MIR SINE MIR -35 227 90 276 30 0 0 chr18 10680825 10680858 -75996690 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 180 0 0 0 chr18 10681166 10681186 -75996362 + (A)n Simple_repeat Simple_repeat 1 20 0 397 339 47 17 chr18 10681567 10681800 -75995748 + L2 LINE L2 2720 2959 -355 26 30 0 0 chr18 10682223 10682256 -75995292 + AT_rich Low_complexity Low_complexity 1 33 0 212 139 278 14 chr18 10682425 10682497 -75995051 - L2 LINE L2 0 3272 3182 737 174 19 0 chr18 10682628 10682789 -75994759 + L1MA4 LINE L1 3617 3780 -2366 1216 182 5 0 chr18 10682794 10683008 -75994540 + U3 snRNA snRNA 1 215 -2 21 0 0 0 chr18 10683406 10683427 -75994121 + AT_rich Low_complexity Low_complexity 1 21 0 6127 204 35 14 chr18 10683427 10685694 -75991854 + L1MA4 LINE L1 3787 6289 -11 2075 201 51 24 chr18 10685816 10685862 -75991686 - MER6 DNA MER2_type -381 484 441 2001 157 7 0 chr18 10685862 10686161 -75991387 - AluSx SINE Alu -11 301 1 2075 201 51 24 chr18 10686161 10686582 -75990966 - MER6 DNA MER2_type -424 441 4 1329 239 92 27 chr18 10686975 10687452 -75990096 - MLT2B1 LTR ERVL -10 510 3 814 172 75 17 chr18 10689791 10689965 -75987583 + MER5A DNA MER1_type 3 186 -3 2076 126 63 20 chr18 10690293 10690642 -75986906 + THE1B LTR MaLR 1 364 0 378 49 295 0 chr18 10691881 10691942 -75985606 - MADE1 DNA Mariner 0 80 2 403 311 81 6 chr18 10692689 10692850 -75984698 - MIR SINE MIR -56 206 34 243 300 51 0 chr18 10694305 10694409 -75983139 + MER5A DNA MER1_type 61 170 -8 180 0 0 0 chr18 10694530 10694550 -75982998 + (TTA)n Simple_repeat Simple_repeat 2 21 0 211 309 73 0 chr18 10694725 10694793 -75982755 - MIR SINE MIR -113 149 77 300 320 16 55 chr18 10696604 10696652 -75980896 + MIR3 SINE MIR 58 106 -102 2327 110 0 0 chr18 10696652 10696962 -75980586 + AluSg SINE Alu 1 310 0 300 320 16 55 chr18 10696962 10697041 -75980507 + MIR3 SINE MIR 106 180 -28 197 408 56 0 chr18 10697438 10697563 -75979985 + L2 LINE L2 2651 2782 -532 1480 190 16 13 chr18 10699691 10700007 -75977541 - MER7A DNA MER2_type 0 346 32 24 67 0 0 chr18 10700442 10700487 -75977061 + AT_rich Low_complexity Low_complexity 1 45 0 2184 163 71 5 chr18 10700525 10700931 -75976617 - Tigger2a DNA MER2_type -1 433 1 433 106 15 0 chr18 10702508 10702574 -75974974 - Tigger2 DNA MER2_type -102 2616 2550 2153 120 0 40 chr18 10703505 10703830 -75973718 + AluSx SINE Alu 1 312 0 1892 112 0 132 chr18 10704524 10704872 -75972676 + AluSg SINE Alu 1 302 -8 228 298 64 35 chr18 10705342 10705483 -75972065 + Charlie8 DNA MER1_type 24 168 -2249 1519 186 19 45 chr18 10706371 10706683 -75970865 + AluJo SINE Alu 1 304 -8 34 24 0 0 chr18 10706943 10706984 -75970564 + AT_rich Low_complexity Low_complexity 1 41 0 2341 179 24 7 chr18 10707951 10708370 -75969178 + MSTB LTR MaLR 1 426 0 645 292 20 5 chr18 10709701 10709896 -75967652 - MIR SINE MIR -51 211 14 184 313 61 10 chr18 10710344 10710443 -75967105 + MIR SINE MIR 37 140 -122 333 356 50 17 chr18 10710454 10710634 -75966914 - MIR SINE MIR -58 204 19 234 319 17 43 chr18 10712195 10712311 -75965237 - L2 LINE L2 -218 3054 2942 716 106 0 44 chr18 10712319 10712432 -75965116 + FAM SINE Alu 36 143 -42 266 237 169 34 chr18 10713367 10713485 -75964063 + MIR SINE MIR 63 196 -66 204 40 0 0 chr18 10713735 10713760 -75963788 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 104 46 0 0 chr18 10713876 10714029 -75963519 + AT_rich Low_complexity Low_complexity 1 153 0 387 0 0 0 chr18 10715473 10715516 -75962032 + (CA)n Simple_repeat Simple_repeat 2 44 0 2755 90 22 0 chr18 10715521 10715923 -75961625 - L1PA8 LINE L1 -13 6159 5749 828 157 0 0 chr18 10715923 10716038 -75961510 - FLAM_C SINE Alu -28 115 1 182 247 113 21 chr18 10716829 10716926 -75960622 - L3 LINE CR1 -221 1356 1251 393 22 0 0 chr18 10717987 10718033 -75959515 + (CA)n Simple_repeat Simple_repeat 2 47 0 267 245 236 0 chr18 10718612 10718718 -75958830 + MER94 DNA DNA 2 132 -2 1718 163 0 74 chr18 10718838 10719164 -75958384 - AluJb SINE Alu -10 302 1 2284 98 3 3 chr18 10720731 10721026 -75956522 + AluSq SINE Alu 1 295 -18 1954 157 3 3 chr18 10722153 10722458 -75955090 - AluSx SINE Alu -7 305 1 526 286 14 146 chr18 10723603 10723967 -75953581 + L2 LINE L2 2954 3269 -3 210 259 56 0 chr18 10724909 10724963 -75952585 + L2 LINE L2 3214 3270 -2 584 259 174 10 chr18 10726303 10726504 -75951044 + MIR SINE MIR 1 234 -28 322 238 24 0 chr18 10726654 10726738 -75950810 + L1MB8 LINE L1 4524 4609 -1537 531 316 77 50 chr18 10726928 10727425 -75950123 + L1MB8 LINE L1 4875 5384 -762 1781 169 68 0 chr18 10727527 10727853 -75949695 - MER7A DNA MER2_type 0 346 1 765 245 84 71 chr18 10727929 10728385 -75949163 - MLT1C LTR MaLR -8 497 4 1751 179 25 92 chr18 10728385 10728820 -75948728 - MLT1C-int LTR MaLR -7 1364 959 1918 198 21 53 chr18 10728956 10729426 -75948122 - MLT1C-int LTR MaLR -484 887 433 1100 188 155 45 chr18 10729501 10729810 -75947738 + MER2 DNA MER2_type 2 344 0 810 179 34 58 chr18 10729820 10730027 -75947521 + L1MA10 LINE L1 6126 6327 -7 387 313 155 14 chr18 10730229 10730577 -75946971 + L3 LINE CR1 1166 1562 -15 2131 151 0 0 chr18 10732537 10732849 -75944699 - AluSx SINE Alu 0 312 1 1255 154 51 0 chr18 10733697 10733950 -75943598 - L1MA8 LINE L1 -4 6287 6022 2223 171 61 66 chr18 10737842 10738386 -75939162 - MER67A LTR ERV1 0 543 3 2184 99 18 0 chr18 10738658 10738941 -75938607 + AluSx SINE Alu 21 308 -4 3389 173 24 44 chr18 10738943 10739225 -75938323 + L1MB8 LINE L1 5415 5701 -477 1756 179 7 3 chr18 10739225 10739515 -75938033 + AluJb SINE Alu 1 291 -21 3389 173 24 44 chr18 10739515 10740011 -75937537 + L1MB8 LINE L1 5701 6178 0 1836 119 83 44 chr18 10740100 10740461 -75937087 + THE1C LTR MaLR 1 375 0 2175 126 0 3 chr18 10743870 10744171 -75933377 - AluSg SINE Alu -10 300 1 573 183 21 78 chr18 10744838 10744980 -75932568 + MER91B DNA MER1_type 57 190 0 368 319 130 45 chr18 10745709 10746001 -75931547 - L1ME3A LINE L1 -204 5949 5633 438 219 10 10 chr18 10746223 10746319 -75931229 - MER5A DNA MER1_type -80 109 14 322 313 13 60 chr18 10746346 10746468 -75931080 + MER5B DNA MER1_type 7 122 -56 1790 186 40 0 chr18 10746473 10746801 -75930747 + MER7A DNA MER2_type 8 346 0 322 313 13 60 chr18 10746801 10746828 -75930720 + MER5B DNA MER1_type 122 149 -29 701 301 62 16 chr18 10746849 10747221 -75930327 - L1ME3A LINE L1 -514 5635 5247 22 0 0 0 chr18 10747507 10747529 -75930019 + AT_rich Low_complexity Low_complexity 1 22 0 950 270 59 10 chr18 10747663 10748070 -75929478 - L1ME3A LINE L1 -1338 4791 4365 279 0 0 0 chr18 10748458 10748489 -75929059 + (TA)n Simple_repeat Simple_repeat 2 32 0 799 272 66 72 chr18 10748965 10749954 -75927594 - L1MEd LINE L1 -4690 1620 600 1884 157 17 0 chr18 10750513 10750812 -75926736 + AluSg SINE Alu 1 304 -6 337 327 97 43 chr18 10750956 10751237 -75926311 + L1ME3A LINE L1 5562 5860 -310 195 42 0 0 chr18 10751590 10751614 -75925934 + (T)n Simple_repeat Simple_repeat 1 24 0 43025 29 22 1 chr18 10751619 10757631 -75919917 - L1PA2 LINE L1 0 6155 13 440 134 12 12 chr18 10757801 10757883 -75919665 - L1PB4 LINE L1 -3 6153 6072 42 0 0 0 chr18 10758300 10758342 -75919206 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr18 10758742 10758772 -75918776 + AT_rich Low_complexity Low_complexity 1 30 0 284 318 166 0 chr18 10762239 10762390 -75915158 + MIR SINE MIR 86 261 -1 186 244 0 0 chr18 10762563 10762604 -75914944 + MIR SINE MIR 218 258 -4 2303 86 0 35 chr18 10762986 10763300 -75914248 + AluY SINE Alu 1 303 -8 1580 287 30 4 chr18 10763322 10763782 -75913766 - MLT1J LTR MaLR -38 473 2 264 234 16 0 chr18 10766024 10766088 -75911460 + MIR SINE MIR 97 161 -101 487 60 0 0 chr18 10767370 10767437 -75910111 + MER41B LTR ERV1 481 547 -88 1509 205 7 13 chr18 10767779 10768077 -75909471 + AluJb SINE Alu 1 296 -16 320 295 62 36 chr18 10768083 10768195 -75909353 - MIR3 SINE MIR -51 157 43 2285 226 19 44 chr18 10768444 10769545 -75908003 - L1M4 LINE L1 -411 5773 4707 827 299 4 8 chr18 10770086 10770330 -75907218 - L1ME LINE L1 -423 5747 5505 1998 151 117 8 chr18 10772775 10773159 -75904389 - MSTB LTR MaLR 0 426 1 392 325 63 19 chr18 10773774 10774153 -75903395 + L1ME LINE L1 4957 5352 -794 299 278 9 26 chr18 10774243 10774358 -75903190 + L1ME LINE L1 5483 5595 -526 198 400 25 8 chr18 10774760 10774880 -75902668 - L2 LINE L2 -844 2470 2349 180 302 0 0 chr18 10775653 10775696 -75901852 + L2 LINE L2 3271 3313 0 426 108 0 0 chr18 10776624 10776689 -75900859 + (TCCC)n Simple_repeat Simple_repeat 3 67 0 678 327 145 38 chr18 10776689 10777566 -75899982 + L2 LINE L2 1982 2952 -362 311 363 28 22 chr18 10778190 10778372 -75899176 + L2 LINE L2 3083 3265 -7 598 85 245 9 chr18 10779150 10779256 -75898292 - MER3 DNA MER1_type -70 139 9 325 330 124 61 chr18 10781171 10781357 -75896191 + MIR3 SINE MIR 11 204 -58 1019 62 16 0 chr18 10781492 10781620 -75895928 - THE1C LTR MaLR -1 374 245 632 226 39 6 chr18 10782535 10782685 -75894863 - L1ME3A LINE L1 -3 6159 6004 2051 125 7 7 chr18 10784757 10785052 -75892496 - AluSx SINE Alu -17 295 1 788 156 0 8 chr18 10786575 10786703 -75890845 - FRAM SINE Alu -16 160 34 831 122 8 210 chr18 10786868 10787106 -75890442 + AluJo SINE Alu 29 218 -94 351 260 21 10 chr18 10787417 10787513 -75890035 + MIR SINE MIR 156 252 -10 803 225 35 12 chr18 10788367 10788536 -75889012 + AluJb SINE Alu 122 294 -18 724 172 0 0 chr18 10788608 10788724 -75888824 + FLAM_C SINE Alu 1 116 -27 44 35 0 0 chr18 10788724 10788782 -75888766 + AT_rich Low_complexity Low_complexity 1 58 0 242 333 63 42 chr18 10789017 10789206 -75888342 + MIR SINE MIR 4 196 -66 22 0 0 0 chr18 10790067 10790089 -75887459 + AT_rich Low_complexity Low_complexity 1 22 0 246 276 0 0 chr18 10791695 10791753 -75885795 - L2 LINE L2 -1 3271 3214 1748 201 21 0 chr18 10792037 10792376 -75885172 + MER7A DNA MER2_type 1 344 -2 333 68 0 0 chr18 10793291 10793335 -75884213 + (TC)n Simple_repeat Simple_repeat 1 44 0 184 272 109 11 chr18 10793494 10793586 -75883962 + L2 LINE L2 3201 3301 -12 386 261 40 115 chr18 10793960 10794034 -75883514 + MIR SINE MIR 24 102 -160 2129 143 18 88 chr18 10794034 10794288 -75883260 - MSTB LTR MaLR 0 426 156 213 39 0 0 chr18 10794288 10794314 -75883234 + (TG)n Simple_repeat Simple_repeat 1 26 0 1950 130 3 11 chr18 10794314 10794598 -75882950 - AluSx SINE Alu -30 282 1 2129 143 18 88 chr18 10794598 10794796 -75882752 - MSTB LTR MaLR -268 158 5 386 261 40 115 chr18 10794796 10794974 -75882574 + MIR SINE MIR 102 257 -5 210 329 49 0 chr18 10795396 10795478 -75882070 + MIR SINE MIR 145 230 -32 239 347 54 7 chr18 10795702 10795849 -75881699 - MIR SINE MIR -17 245 92 14765 114 57 24 chr18 10796092 10798440 -75879108 - Tigger1 DNA MER2_type 0 2418 2 1656 198 3 13 chr18 10798592 10798905 -75878643 - AluJo SINE Alu -2 310 1 293 175 18 0 chr18 10803866 10803923 -75873625 + L2 LINE L2 3256 3313 0 293 247 52 91 chr18 10805127 10805281 -75872267 + MIR3 SINE MIR 9 156 -52 21 0 0 31 chr18 10805470 10805487 -75872061 + AT_rich Low_complexity Low_complexity 1 18 -13 2319 65 10 14 chr18 10805487 10805780 -75871768 + AluY SINE Alu 1 292 -19 21 0 0 31 chr18 10805780 10805794 -75871754 + AT_rich Low_complexity Low_complexity 18 31 0 191 333 114 26 chr18 10805897 10806011 -75871537 - MIR3 SINE MIR -39 169 46 188 196 0 20 chr18 10809087 10809138 -75868410 + (TATG)n Simple_repeat Simple_repeat 2 51 0 243 264 0 0 chr18 10810028 10810081 -75867467 - L2 LINE L2 -10 3262 3210 209 228 150 92 chr18 10810490 10810673 -75866875 - MIR SINE MIR -58 204 14 21 57 0 0 chr18 10811640 10811675 -75865873 + AT_rich Low_complexity Low_complexity 1 35 0 1291 130 30 30 chr18 10812572 10812675 -75864873 - MER30 DNA MER1_type 0 230 128 2156 131 0 0 chr18 10812675 10812973 -75864575 + AluSx SINE Alu 1 298 -14 180 0 0 0 chr18 10812973 10812993 -75864555 + (TA)n Simple_repeat Simple_repeat 2 21 0 1291 130 30 30 chr18 10812993 10813118 -75864430 - MER30 DNA MER1_type -100 130 1 1014 182 31 0 chr18 10814168 10814360 -75863188 - MER58A DNA MER1_type -1 223 26 1965 153 3 10 chr18 10814644 10814957 -75862591 - AluJb SINE Alu -1 311 1 186 133 0 0 chr18 10816250 10816280 -75861268 + (T)n Simple_repeat Simple_repeat 1 30 0 225 245 0 0 chr18 10818589 10818638 -75858910 - L2 LINE L2 0 3272 3224 1044 92 0 0 chr18 10819257 10819388 -75858160 + AluSg/x SINE Alu 168 298 -14 359 207 48 133 chr18 10819510 10819780 -75857768 + MER112 DNA MER1_type 3 249 -11 516 72 0 0 chr18 10820122 10820191 -75857357 + (TA)n Simple_repeat Simple_repeat 2 70 0 212 139 278 14 chr18 10820271 10820343 -75857205 + L2 LINE L2 3182 3272 0 26 30 0 0 chr18 10820512 10820545 -75857003 + AT_rich Low_complexity Low_complexity 1 33 0 390 343 47 17 chr18 10820967 10821200 -75856348 - L2 LINE L2 -355 2959 2720 276 30 0 0 chr18 10821906 10821939 -75855609 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 374 272 44 29 chr18 10825002 10825138 -75852410 + MIR SINE MIR 90 227 -35 1484 185 122 28 chr18 10827066 10827428 -75850120 - MSTD LTR MaLR 0 396 1 235 351 30 15 chr18 10828577 10828708 -75848840 - L3b LINE CR1 -343 1240 1108 318 284 45 74 chr18 10829051 10829227 -75848321 + MIR SINE MIR 37 207 -55 241 275 119 9 chr18 10829598 10829707 -75847841 - MER5A DNA MER1_type -29 160 40 802 292 87 12 chr18 10832632 10833033 -75844515 + L2 LINE L2 1293 1723 -1591 1412 276 116 29 chr18 10833033 10834163 -75843385 + L2 LINE L2 2047 3312 -1 255 31 0 0 chr18 10834601 10834633 -75842915 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 25 31 0 0 chr18 10837514 10837546 -75840002 + AT_rich Low_complexity Low_complexity 1 32 0 1579 156 83 28 chr18 10838494 10838782 -75838766 + AluJo SINE Alu 1 304 -8 30027 107 9 27 chr18 10839485 10840176 -75837372 - L1PA7 LINE L1 0 6469 5767 2166 111 26 7 chr18 10840176 10840483 -75837065 - AluSp SINE Alu 0 313 1 30027 107 9 27 chr18 10840483 10846278 -75831270 - L1PA7 LINE L1 -702 5767 5 309 259 149 50 chr18 10846283 10846484 -75831064 - L2 LINE L2 -959 2355 2135 334 269 28 21 chr18 10846718 10846863 -75830685 + CT-rich Low_complexity Low_complexity 3 148 0 2344 112 0 0 chr18 10846875 10847178 -75830370 - AluSc SINE Alu -6 303 1 352 279 182 2 chr18 10847966 10848118 -75829430 + MIR3 SINE MIR 15 190 -18 318 356 50 17 chr18 10850495 10850675 -75826873 + MIR SINE MIR 19 204 -58 193 324 49 15 chr18 10850686 10850816 -75826732 - MIR SINE MIR -67 141 10 634 297 20 5 chr18 10851233 10851428 -75826120 + MIR SINE MIR 14 211 -51 2526 179 24 7 chr18 10852759 10853178 -75824370 - MSTB LTR MaLR 0 426 1 34 24 0 0 chr18 10854145 10854186 -75823362 + AT_rich Low_complexity Low_complexity 1 41 0 1498 186 19 45 chr18 10854446 10854758 -75822790 - AluJo SINE Alu -8 304 1 287 298 64 35 chr18 10855646 10855787 -75821761 - Charlie8 DNA MER1_type -2249 168 24 2251 114 0 3 chr18 10856257 10856563 -75820985 - AluSq SINE Alu -8 305 1 3457 135 19 2 chr18 10858501 10859034 -75818514 + L1MB3 LINE L1 5634 6175 -8 2118 116 6 19 chr18 10859047 10859358 -75818190 + AluSc SINE Alu 1 307 -2 471 329 59 43 chr18 10860777 10861032 -75816516 - MIR SINE MIR -1 261 3 366 256 0 0 chr18 10864127 10864205 -75813343 - MIR3 SINE MIR -23 185 108 2090 126 48 9 chr18 10865897 10866231 -75811317 - MER47A DNA MER2_type 0 366 20 797 131 106 8 chr18 10866246 10866387 -75811161 - THE1B LTR MaLR 0 375 220 23 0 0 0 chr18 10866428 10866451 -75811097 + AT_rich Low_complexity Low_complexity 1 23 0 332 277 139 12 chr18 10866606 10866772 -75810776 + MER5A DNA MER1_type 3 189 0 192 77 0 0 chr18 10866857 10866883 -75810665 + (A)n Simple_repeat Simple_repeat 1 26 0 234 133 0 44 chr18 10867089 10867134 -75810414 - L1MC4 LINE L1 -1340 6702 6660 2952 126 11 49 chr18 10867649 10867953 -75809595 - LTR8A LTR ERV1 -1 726 412 2118 114 10 0 chr18 10867953 10868242 -75809306 + AluSx SINE Alu 5 296 -16 2952 126 11 49 chr18 10868242 10868598 -75808950 - LTR8A LTR ERV1 -315 412 3 216 0 0 0 chr18 10870368 10870392 -75807156 + (GA)n Simple_repeat Simple_repeat 2 25 0 294 386 55 7 chr18 10870424 10870569 -75806979 + L3b LINE CR1 1408 1559 -24 929 174 213 27 chr18 10871469 10871741 -75805807 - MER57A LTR ERV1 0 403 113 3403 155 6 6 chr18 10871742 10872278 -75805270 - MER50 LTR ERV1 -24 710 175 6132 103 9 65 chr18 10872278 10872664 -75804884 - MER50-int LTR ERV1 -541 4339 3933 2224 121 0 10 chr18 10872664 10872978 -75804570 + AluSx SINE Alu 1 311 -1 6132 103 9 65 chr18 10872978 10873622 -75803926 - MER50-int LTR ERV1 -947 3933 3870 2316 114 0 0 chr18 10873622 10873930 -75803618 - AluSc SINE Alu -1 308 1 6132 103 9 65 chr18 10873930 10874176 -75803372 - MER50-int LTR ERV1 -1010 3870 3612 1309 171 0 9 chr18 10874186 10874402 -75803146 - MER50-int LTR ERV1 -6991 214 1 339 200 0 0 chr18 10874402 10874445 -75803103 - MER50-int LTR ERV1 -7161 44 2 4456 148 6 11 chr18 10874447 10875162 -75802386 - MER50 LTR ERV1 -23 711 1 258 284 98 10 chr18 10875162 10875261 -75802287 - MER57B LTR ERV1 -317 117 10 385 259 0 12 chr18 10875266 10875347 -75802201 - L2 LINE L2 -34 3279 3200 186 71 0 0 chr18 10876358 10876386 -75801162 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1012 163 0 0 chr18 10876386 10876539 -75801009 - L1PA16 LINE L1 -18 6148 5996 247 279 58 0 chr18 10877874 10877960 -75799588 - L2 LINE L2 -77 3236 3146 21 0 0 0 chr18 10879317 10879338 -75798210 + AT_rich Low_complexity Low_complexity 1 21 0 240 358 43 6 chr18 10879496 10879658 -75797890 - MIR SINE MIR -80 182 15 2003 90 0 4 chr18 10880249 10880517 -75797031 + AluSc SINE Alu 42 308 -1 1977 145 3 0 chr18 10881105 10881402 -75796146 - AluSx SINE Alu -14 298 1 208 362 94 34 chr18 10881453 10881890 -75795658 - L2 LINE L2 -337 2977 2515 1719 146 60 0 chr18 10883186 10883467 -75794081 + AluJb SINE Alu 1 298 -14 2548 136 73 11 chr18 10884173 10884613 -75792935 - L1MA8 LINE L1 -4 6287 5821 23 0 0 0 chr18 10884741 10884764 -75792784 + AT_rich Low_complexity Low_complexity 1 23 0 269 250 62 0 chr18 10885573 10885653 -75791895 + L1MC4 LINE L1 7088 7172 -870 2373 271 74 67 chr18 10885665 10887117 -75790431 + L1MC4a LINE L1 5875 7336 -472 276 267 128 56 chr18 10887162 10887450 -75790098 + L1MC4 LINE L1 7707 8015 -27 213 39 0 0 chr18 10889312 10889338 -75788210 + (T)n Simple_repeat Simple_repeat 1 26 0 2654 162 15 6 chr18 10889579 10890061 -75787487 + L1PB4 LINE L1 5628 6155 -1 1719 185 0 10 chr18 10892313 10892611 -75784937 - AluJb SINE Alu -17 295 1 649 282 39 39 chr18 10893275 10893530 -75784018 - MIR SINE MIR 0 262 8 580 154 30 8 chr18 10894832 10894971 -75782577 - L1MC4 LINE L1 0 8042 7649 289 270 20 47 chr18 10894945 10895093 -75782455 - L1MC4 LINE L1 -135 7907 7764 * 2233 117 0 0 chr18 10895196 10895496 -75782052 + AluSx SINE Alu 1 300 -12 1695 207 54 11 chr18 10895670 10896023 -75781525 - MLT1A2 LTR MaLR -4 370 3 28 0 0 0 chr18 10897179 10897207 -75780341 + AT_rich Low_complexity Low_complexity 1 28 0 851 259 123 18 chr18 10897499 10897882 -75779666 + L1MC4 LINE L1 7492 7914 -128 275 0 29 0 chr18 10898922 10898957 -75778591 + (CAAAAA)n Simple_repeat Simple_repeat 2 37 0 2187 73 22 0 chr18 10900411 10900710 -75776838 - AluY SINE Alu 0 305 1 349 289 0 29 chr18 10900762 10900923 -75776625 + L1M2 LINE L1 5299 5454 -853 825 264 67 12 chr18 10901056 10901310 -75776238 + MLT1C LTR MaLR 200 467 0 344 245 57 19 chr18 10901312 10901418 -75776130 - L2 LINE L2 -997 2317 2208 301 303 70 18 chr18 10901511 10901739 -75775809 + L1ME4a LINE L1 5642 5881 -240 343 244 134 0 chr18 10901765 10901892 -75775656 + L1ME4a LINE L1 5963 6106 -15 1359 242 89 75 chr18 10902446 10902682 -75774866 - L2 LINE L2 -1 3312 3081 1775 168 10 10 chr18 10902682 10902974 -75774574 - AluJo SINE Alu -20 292 1 1359 242 89 75 chr18 10902974 10903668 -75773880 - L2 LINE L2 -232 3081 2358 1340 202 83 112 chr18 10903725 10903879 -75773669 + MLT1C LTR MaLR 1 158 -309 2263 74 7 0 chr18 10903879 10904164 -75773384 + L1PA8 LINE L1 5886 6172 0 1340 202 83 112 chr18 10904164 10904188 -75773360 + MLT1C LTR MaLR 158 181 -286 1826 140 3 24 chr18 10904188 10904480 -75773068 + AluSx SINE Alu 4 289 -23 1340 202 83 112 chr18 10904480 10904781 -75772767 + MLT1C LTR MaLR 181 467 0 1756 268 219 37 chr18 10904783 10905545 -75772003 - L2 LINE L2 -997 2317 1695 2309 84 0 31 chr18 10905545 10905865 -75771683 - AluSg SINE Alu 0 310 1 1756 268 219 37 chr18 10905865 10906226 -75771322 - L2 LINE L2 -1619 1695 990 23 33 0 0 chr18 10906551 10906581 -75770967 + AT_rich Low_complexity Low_complexity 1 30 0 1543 182 21 31 chr18 10906683 10906974 -75770574 + AluJo SINE Alu 1 288 -24 3801 119 29 11 chr18 10907861 10908417 -75769131 + L1PB3 LINE L1 5587 6152 -2 2088 101 38 0 chr18 10908827 10909115 -75768433 - AluSx SINE Alu -13 299 1 1678 167 36 16 chr18 10909699 10910004 -75767544 - AluJb SINE Alu 0 312 2 1472 209 37 39 chr18 10913300 10913348 -75764200 - MER4D LTR ERV1 0 903 856 2405 71 0 0 chr18 10913348 10913642 -75763906 + AluY SINE Alu 1 294 -17 1472 209 37 39 chr18 10913642 10913948 -75763600 - MER4D LTR ERV1 -47 856 550 1353 146 111 20 chr18 10914006 10914259 -75763289 - MER49 LTR ERV1 -638 285 10 326 244 126 24 chr18 10915442 10915569 -75761979 + L2 LINE L2 3129 3268 -4 1746 216 42 24 chr18 10915569 10915902 -75761646 - MER57B LTR ERV1 0 434 90 2216 152 48 35 chr18 10915902 10916297 -75761251 + MER57A LTR ERV1 4 403 0 1746 216 42 24 chr18 10916297 10916389 -75761159 - MER57B LTR ERV1 -344 90 1 327 267 100 8 chr18 10916507 10916627 -75760921 - MIR SINE MIR -13 249 119 208 278 119 24 chr18 10916679 10916805 -75760743 - L2 LINE L2 -1868 1446 1309 702 210 17 0 chr18 10916972 10917091 -75760457 + FLAM_A SINE Alu 2 122 -11 2132 130 0 3 chr18 10917109 10917416 -75760132 + AluSx SINE Alu 7 312 0 338 279 39 0 chr18 10968582 10968686 -75708862 + MER91A DNA MER1_type 3 110 -86 4775 77 14 20 chr18 10968977 10969629 -75707919 - L1PA7 LINE L1 0 6154 5507 499 280 123 36 chr18 10969727 10970139 -75707409 + L1ME4a LINE L1 5381 5828 -293 353 245 41 0 chr18 10970189 10970287 -75707261 + L1ME4a LINE L1 5963 6064 -57 393 273 195 19 chr18 10970770 10970924 -75706624 - MER5A DNA MER1_type 0 189 9 668 260 28 6 chr18 10970950 10971127 -75706421 - MER5A DNA MER1_type 0 189 9 508 259 171 0 chr18 10971160 10971318 -75706230 + MER5A DNA MER1_type 4 188 -1 2063 114 0 3 chr18 10972210 10972508 -75705040 + AluSg SINE Alu 1 297 -13 1256 147 81 4 chr18 10974353 10974770 -75702778 - LTR54 LTR ERV1 0 510 1 1630 142 18 14 chr18 10975573 10975879 -75701669 + AluJo SINE Alu 3 309 0 216 138 121 52 chr18 10976124 10976182 -75701366 + MIR SINE MIR 108 169 -93 447 248 18 9 chr18 10977357 10977470 -75700078 - MER81 DNA DNA 0 114 1 685 96 78 183 chr18 10977647 10977775 -75699773 + L1MA10 LINE L1 6108 6205 -129 2488 165 16 28 chr18 10977775 10977828 -75699720 + MSTB LTR MaLR 1 53 -373 1927 130 0 7 chr18 10977828 10978120 -75699428 + AluSx SINE Alu 1 290 -22 2488 165 16 28 chr18 10978120 10978497 -75699051 + MSTB LTR MaLR 53 426 0 685 96 78 183 chr18 10978497 10978587 -75698961 + L1MA10 LINE L1 6205 6303 -31 747 144 17 28 chr18 10978592 10978772 -75698776 + GA-rich Low_complexity Low_complexity 1 178 0 219 262 0 33 chr18 10982695 10982756 -75694792 - L2 LINE L2 -10 3303 3245 1688 132 8 4 chr18 10983193 10983450 -75694098 + AluSx SINE Alu 44 301 -11 307 159 72 0 chr18 10983547 10983616 -75693932 + L1MA9 LINE L1 6207 6280 -32 227 276 53 0 chr18 10983933 10984009 -75693539 - LTR33A LTR ERVL -174 349 270 304 344 40 0 chr18 10984044 10984169 -75693379 - LTR33A LTR ERVL -334 189 60 756 262 208 42 chr18 10984213 10984598 -75692950 - LTR16A LTR ERVL 0 450 2 2147 102 0 3 chr18 10984683 10984977 -75692571 + AluSx SINE Alu 1 293 -19 876 185 26 11 chr18 10985327 10985516 -75692032 - L1MC3 LINE L1 -8 7777 7586 1883 137 0 7 chr18 10985618 10985902 -75691646 + AluSx SINE Alu 1 282 -30 2502 111 11 24 chr18 10988400 10988441 -75689107 - THE1C LTR MaLR 0 375 335 1856 152 7 3 chr18 10988441 10988744 -75688804 + AluSx SINE Alu 1 304 -8 2502 111 11 24 chr18 10988744 10989082 -75688466 - THE1C LTR MaLR -40 335 1 212 338 103 0 chr18 10989516 10989584 -75687964 - L2 LINE L2 -71 3201 3127 360 323 75 0 chr18 10991298 10991459 -75686089 - MIR SINE MIR -65 197 25 615 212 27 41 chr18 10991895 10992041 -75685507 + MER3 DNA MER1_type 1 144 -65 465 157 12 0 chr18 10992072 10992155 -75685393 + MER3 DNA MER1_type 126 209 0 715 265 97 10 chr18 10993035 10993231 -75684317 - MIR SINE MIR -3 259 47 1195 147 0 11 chr18 10993295 10993486 -75684062 + AluJo SINE Alu 3 191 -121 311 270 96 26 chr18 10993733 10993807 -75683741 - L2 LINE L2 -5 3308 3222 1752 125 7 15 chr18 10993807 10994079 -75683469 + AluSx SINE Alu 42 311 -1 311 270 96 26 chr18 10994079 10994119 -75683429 - L2 LINE L2 -91 3222 3186 896 238 14 18 chr18 10994119 10994342 -75683206 - MER58A DNA MER1_type -2 222 1 221 320 17 29 chr18 10994710 10994826 -75682722 + MIR SINE MIR 19 130 -78 293 192 58 0 chr18 10996017 10996069 -75681479 - L2 LINE L2 -5 3267 3213 663 308 66 39 chr18 10996074 10996379 -75681169 - L2 LINE L2 -2 3311 2999 363 282 111 117 chr18 10996757 10997602 -75679946 - L2 LINE L2 -368 2946 2107 400 342 107 23 chr18 10999326 10999589 -75677959 - L1ME4a LINE L1 0 6121 5837 1074 252 24 0 chr18 10999833 11000087 -75677461 - MIR SINE MIR 0 262 3 2061 101 3 7 chr18 11000356 11000652 -75676896 - AluSp SINE Alu -17 296 2 269 238 109 30 chr18 11000682 11000783 -75676765 - MIR SINE MIR -27 235 127 251 246 62 31 chr18 11001958 11001978 -75675570 + AluSg/x SINE Alu 114 135 -167 2290 118 0 0 chr18 11001978 11002291 -75675257 + AluSq SINE Alu 1 313 0 355 96 164 0 chr18 11002481 11002554 -75674994 - L1MB3 LINE L1 0 6183 6099 851 222 107 36 chr18 11002554 11002806 -75674742 - MER57A LTR ERV1 0 403 134 1122 180 94 30 chr18 11002855 11003152 -75674396 - MER33 DNA MER1_type -15 309 1 1340 224 102 39 chr18 11003152 11003217 -75674331 - L1ME3A LINE L1 -210 5960 5901 743 231 102 0 chr18 11003217 11003403 -75674145 - MER3 DNA MER1_type -4 205 1 1340 224 102 39 chr18 11003403 11003860 -75673688 - L1ME3A LINE L1 -269 5901 5408 26 74 0 0 chr18 11003860 11003914 -75673634 + AT_rich Low_complexity Low_complexity 1 54 0 1471 155 29 92 chr18 11003973 11004289 -75673259 - AluJo SINE Alu -16 296 1 517 313 145 36 chr18 11004397 11005319 -75672229 + L2 LINE L2 2282 3311 -2 189 250 0 0 chr18 11005317 11005361 -75672187 - L2 LINE L2 -262 3051 3008 * 2339 104 0 0 chr18 11005482 11005779 -75671769 + AluSq SINE Alu 1 297 -16 637 232 71 0 chr18 11006968 11007136 -75670412 - MIR SINE MIR 0 262 83 285 277 36 36 chr18 11007900 11008012 -75669536 - L2 LINE L2 -1 3312 3201 1772 98 0 8 chr18 11008047 11008293 -75669255 - L1PB1 LINE L1 -1 6150 5907 728 187 8 0 chr18 11008324 11008447 -75669101 + FLAM_C SINE Alu 2 125 -18 221 213 75 25 chr18 11008601 11008681 -75668867 - MIR SINE MIR -62 200 117 513 141 0 0 chr18 11009326 11009418 -75668130 - L1MA4 LINE L1 -5 6295 6204 244 266 75 0 chr18 11010683 11010777 -75666771 + L2 LINE L2 3163 3263 -9 1827 283 154 22 chr18 11010992 11012249 -75665299 - L2 LINE L2 0 3313 1898 270 324 19 19 chr18 11012278 11012383 -75665165 - L2 LINE L2 -25 3247 3143 2060 157 0 3 chr18 11012736 11013049 -75664499 - AluJo SINE Alu 0 312 1 785 217 74 16 chr18 11014878 11015067 -75662481 + MER3 DNA MER1_type 6 205 -4 1494 197 9 38 chr18 11017260 11017580 -75659968 - AluJo SINE Alu -1 311 1 341 102 0 0 chr18 11018514 11018563 -75658985 - L1PA7 LINE L1 -5 6149 6101 478 294 43 22 chr18 11019092 11019323 -75658225 - MIR SINE MIR -25 237 2 182 333 35 11 chr18 11019323 11019404 -75658144 + MIR SINE MIR 158 240 -22 560 233 86 37 chr18 11019442 11019605 -75657943 + MIR SINE MIR 1 171 -91 5881 116 38 10 chr18 11019614 11020672 -75656876 - L1PA15 LINE L1 -3 6162 5105 3686 162 3 22 chr18 11020680 11021346 -75656202 + L1PA15 LINE L1 4434 5086 -1060 204 125 0 0 chr18 11021987 11022019 -75655529 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1873 152 0 24 chr18 11024259 11024555 -75652993 - AluJo SINE Alu -23 289 1 182 308 0 46 chr18 11025911 11025976 -75651572 + MIR SINE MIR 9 70 -192 244 289 122 39 chr18 11028421 11028601 -75648947 + MIR SINE MIR 34 228 -34 370 224 28 19 chr18 11029849 11029956 -75647592 - Charlie2 DNA MER1_type -3 2859 2752 901 224 97 19 chr18 11029966 11030189 -75647359 - Charlie2a DNA MER1_type -1857 1005 757 1931 145 0 0 chr18 11030189 11030507 -75647041 + AluSx SINE Alu 1 318 0 901 224 97 19 chr18 11030507 11030541 -75647007 - Charlie2a DNA MER1_type -2105 757 727 275 203 216 0 chr18 11030533 11030607 -75646941 - Charlie2a DNA MER1_type -2388 474 385 * 277 217 205 0 chr18 11030639 11030722 -75646826 - Charlie2a DNA MER1_type -2495 287 188 1804 175 24 0 chr18 11030722 11031013 -75646535 + AluJb SINE Alu 1 298 -14 403 153 8 8 chr18 11031013 11031131 -75646417 + GA-rich Low_complexity Low_complexity 1 118 0 1728 102 68 41 chr18 11031159 11031425 -75646123 + AluSc SINE Alu 14 286 -23 218 111 67 0 chr18 11031445 11031490 -75646058 + A-rich Low_complexity Low_complexity 2 49 0 433 268 65 0 chr18 11031529 11031652 -75645896 - Charlie2a DNA MER1_type -2645 137 7 574 119 79 30 chr18 11031654 11031755 -75645793 - FLAM_A SINE Alu -14 128 23 220 354 0 24 chr18 11031851 11031933 -75645615 + L2 LINE L2 3160 3239 -33 213 366 19 12 chr18 11032294 11032455 -75645093 - L2 LINE L2 -498 2816 2655 241 56 0 0 chr18 11032698 11032734 -75644814 + L1PA6 LINE L1 6115 6150 -4 799 276 18 13 chr18 11032983 11033211 -75644337 + MIR SINE MIR 34 262 0 718 141 49 42 chr18 11033394 11033536 -75644012 - L1PB4 LINE L1 -5 6151 6009 345 299 60 15 chr18 11035240 11035374 -75642174 + MER5B DNA MER1_type 39 178 0 312 241 62 45 chr18 11035777 11035889 -75641659 - L2 LINE L2 -3 3310 3197 366 343 24 6 chr18 11036772 11036938 -75640610 - MIR SINE MIR -61 201 33 320 198 77 0 chr18 11038846 11038937 -75638611 + L1MC4 LINE L1 6614 6711 -1331 230 157 78 20 chr18 11038950 11039001 -75638547 + L1MEd LINE L1 35 88 -6031 206 236 0 18 chr18 11039001 11039056 -75638492 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 231 400 32 0 chr18 11039208 11039363 -75638185 + L1MEd LINE L1 226 385 -5734 363 253 128 89 chr18 11039481 11040268 -75637280 + L1M4 LINE L1 2884 3701 -2445 1375 247 11 19 chr18 11040688 11041056 -75636492 - MLT1A2 LTR MaLR -9 365 1 243 303 11 0 chr18 11041057 11041146 -75636402 + MIR SINE MIR 158 247 -15 3372 149 100 3 chr18 11044400 11045012 -75632536 + LTR51 LTR ERV1 1 671 0 202 306 16 0 chr18 11045096 11045158 -75632390 + L2 LINE L2 2718 2780 -534 622 279 20 0 chr18 11045338 11045539 -75632009 + MER3 DNA MER1_type 5 209 0 239 214 0 117 chr18 11045793 11045896 -75631652 + MIR SINE MIR 106 196 -66 2272 128 21 90 chr18 11046742 11047118 -75630430 - L1PA16 LINE L1 -1 6165 5827 2398 91 0 3 chr18 11047118 11047425 -75630123 - AluSg1 SINE Alu -3 306 1 2272 128 21 90 chr18 11047425 11047526 -75630022 - L1PA16 LINE L1 -339 5827 5721 209 330 58 21 chr18 11047776 11047964 -75629584 - L2 LINE L2 -568 2746 2552 205 257 71 14 chr18 11048275 11048345 -75629203 - L2 LINE L2 -19 3253 3180 2383 87 0 3 chr18 11048385 11048683 -75628865 + AluSx SINE Alu 1 297 -15 282 277 174 33 chr18 11048987 11049171 -75628377 - MIR SINE MIR -32 230 21 318 167 115 13 chr18 11050160 11050238 -75627310 - LTR67 LTR ERVL -8 549 464 189 299 0 77 chr18 11050989 11051106 -75626442 - L2 LINE L2 -1886 1428 1321 315 164 0 0 chr18 11052706 11052767 -75624781 + (CA)n Simple_repeat Simple_repeat 2 62 0 356 346 112 0 chr18 11055864 11056069 -75621479 - MIR SINE MIR -7 255 28 581 317 10 14 chr18 11056095 11056303 -75621245 - MIR3 SINE MIR 0 208 2 636 206 249 11 chr18 11057213 11057402 -75620146 - MIR SINE MIR -14 248 15 266 316 40 0 chr18 11057647 11057723 -75619825 + MIR SINE MIR 103 181 -81 256 333 61 9 chr18 11057727 11057841 -75619707 - MIR3 SINE MIR -4 204 85 541 283 64 30 chr18 11057937 11058170 -75619378 - MARNA DNA Mariner -85 501 261 222 166 20 38 chr18 11058798 11058854 -75618694 - MIR SINE MIR -75 133 77 228 265 41 31 chr18 11059661 11059759 -75617789 + MIR SINE MIR 36 134 -74 210 71 0 0 chr18 11060080 11060108 -75617440 + (TC)n Simple_repeat Simple_repeat 1 28 0 209 353 60 25 chr18 11060376 11060409 -75617139 - MIR SINE MIR -48 214 184 620 189 31 99 chr18 11060409 11060600 -75616948 - MER5B DNA MER1_type 0 178 1 209 353 60 25 chr18 11060600 11060767 -75616781 - MIR SINE MIR -78 184 7 389 183 69 45 chr18 11060767 11060871 -75616677 + MER5A DNA MER1_type 9 100 -78 204 309 0 0 chr18 11062959 11063014 -75614534 + L2 LINE L2 3168 3222 -50 1634 195 20 0 chr18 11064135 11064438 -75613110 + AluJo SINE Alu 1 309 -3 2824 6 0 9 chr18 11066529 11066850 -75610698 - AluYb8 SINE Alu 0 318 1 933 186 0 6 chr18 11068211 11068378 -75609170 + FRAM SINE Alu 1 164 -12 226 320 0 13 chr18 11069822 11069897 -75607651 + L2 LINE L2 3237 3310 -3 711 226 13 0 chr18 11070717 11070872 -75606676 + L1MB5 LINE L1 6018 6174 0 180 111 0 0 chr18 11071203 11071230 -75606318 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 385 218 136 9 chr18 11073027 11073137 -75604411 - MER20 DNA MER1_type -95 124 1 21 0 0 0 chr18 11075834 11075855 -75601693 + AT_rich Low_complexity Low_complexity 1 21 0 29 28 0 0 chr18 11077062 11077098 -75600450 + AT_rich Low_complexity Low_complexity 1 36 0 2315 91 0 0 chr18 11077493 11077802 -75599746 + AluSc SINE Alu 1 309 0 1548 170 4 4 chr18 11078668 11078944 -75598604 + AluJo SINE Alu 18 293 -19 517 263 38 8 chr18 11079204 11079337 -75598211 - L2 LINE L2 0 3313 3177 2533 161 57 5 chr18 11079347 11079789 -75597759 - MER31A LTR ERV1 -20 465 1 1967 264 101 51 chr18 11079795 11080967 -75596581 - L2 LINE L2 -129 3184 1944 504 240 109 46 chr18 11081992 11082167 -75595381 - MER63A DNA MER1_type -23 187 2 243 146 0 0 chr18 11082211 11082252 -75595296 + (TG)n Simple_repeat Simple_repeat 1 41 0 795 173 11 94 chr18 11082370 11082561 -75594987 + MER5B DNA MER1_type 4 178 0 2375 67 0 0 chr18 11083155 11083455 -75594093 + AluY SINE Alu 1 300 -11 274 292 35 76 chr18 11083961 11084132 -75593416 + MLT1K LTR MaLR 5 168 -420 443 218 56 28 chr18 11084389 11084531 -75593017 + L1MC5 LINE L1 7080 7225 -736 2513 247 55 49 chr18 11084726 11085122 -75592426 + L1ME3 LINE L1 4962 5354 -808 2271 80 0 0 chr18 11085122 11085446 -75592102 + AluY SINE Alu 1 324 0 2513 247 55 49 chr18 11085446 11086225 -75591323 + L1ME3 LINE L1 5354 6162 0 1085 210 32 94 chr18 11086322 11086788 -75590760 + L1MC5 LINE L1 7248 7684 -277 2364 54 0 10 chr18 11086818 11087114 -75590434 + AluY SINE Alu 1 293 -18 3032 201 96 96 chr18 11087124 11088198 -75589350 + L1MC4a LINE L1 6735 7808 0 2172 63 0 14 chr18 11088255 11088567 -75588981 - AluY SINE Alu 0 308 1 188 216 176 27 chr18 11089132 11089206 -75588342 - MIR3 SINE MIR -39 169 85 201 186 0 23 chr18 11089231 11089274 -75588274 + CT-rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr18 11089436 11089457 -75588091 + AT_rich Low_complexity Low_complexity 1 21 0 255 304 0 51 chr18 11090232 11090311 -75587237 + MIR SINE MIR 32 106 -102 196 268 197 0 chr18 11090308 11090379 -75587169 + MIR SINE MIR 64 148 -114 * 1484 136 4 45 chr18 11092495 11092759 -75584789 - AluJo SINE Alu -59 253 1 266 271 102 25 chr18 11092776 11092894 -75584654 - L2 LINE L2 -1 3271 3145 279 200 0 0 chr18 11092904 11092954 -75584594 + MIR SINE MIR 108 157 -105 2242 92 0 13 chr18 11092959 11093262 -75584286 + AluSx SINE Alu 1 299 -13 1109 153 69 9 chr18 11093271 11093487 -75584061 + L1MB7 LINE L1 5887 6115 -69 1423 204 176 23 chr18 11093488 11093919 -75583629 - LTR54B LTR ERV1 0 498 2 418 136 0 0 chr18 11093919 11093985 -75583563 + L1MB7 LINE L1 6114 6179 -5 660 156 78 30 chr18 11094670 11094837 -75582711 - MER5B DNA MER1_type 0 178 4 263 214 17 128 chr18 11094857 11094974 -75582574 + MER5B DNA MER1_type 10 113 -65 190 313 16 0 chr18 11095561 11095625 -75581923 + L2 LINE L2 3207 3271 -1 275 170 19 0 chr18 11097772 11097825 -75579723 - L1MB7 LINE L1 -7 6177 6124 * 370 171 79 0 chr18 11097822 11097898 -75579650 + L1PA16 LINE L1 5961 6042 -124 280 234 36 45 chr18 11097953 11098064 -75579484 + L1PB4 LINE L1 6040 6149 -7 * 3018 179 56 33 chr18 11098058 11098738 -75578810 - L1MB7 LINE L1 -43 6141 5435 242 173 135 0 chr18 11099214 11099266 -75578282 - L1PA12 LINE L1 -5834 1747 1689 931 188 18 0 chr18 11099494 11099664 -75577884 + FRAM SINE Alu 1 173 -3 468 175 155 0 chr18 11099798 11099901 -75577647 + MER94 DNA DNA 2 120 -14 391 314 46 24 chr18 11102004 11102195 -75575353 - MIR SINE MIR -14 248 50 676 270 18 0 chr18 11103288 11103451 -75574097 + MLT2F LTR ERVL 3 168 -495 2423 219 46 8 chr18 11103597 11104118 -75573430 - MLT1F LTR MaLR 0 542 2 4399 251 102 20 chr18 11104821 11106483 -75571065 + L1MEc LINE L1 34 1831 -4565 2262 181 62 18 chr18 11109107 11109653 -75567895 + L1MEc LINE L1 1803 2372 -4024 871 214 67 20 chr18 11111904 11112352 -75565196 + MLT1F1 LTR MaLR 2 539 -28 186 212 42 127 chr18 11113710 11113828 -75563720 - L3 LINE CR1 -372 1205 1098 2018 119 46 3 chr18 11114000 11114328 -75563220 - MSTA LTR MaLR -86 342 1 322 229 0 29 chr18 11114330 11114400 -75563148 - L1MC3 LINE L1 -1014 6771 6704 313 246 58 14 chr18 11114596 11114734 -75562814 - MER113 DNA MER1_type? -365 156 13 1571 214 88 26 chr18 11114818 11115248 -75562300 - MLT1C LTR MaLR -10 457 1 195 204 130 0 chr18 11115557 11115611 -75561937 + MIR3 SINE MIR 123 183 -25 2438 67 0 3 chr18 11115769 11116081 -75561467 - AluSx SINE Alu -1 311 1 202 326 0 53 chr18 11116225 11116320 -75561228 - L2 LINE L2 -70 3243 3154 3089 192 15 22 chr18 11116439 11116622 -75560926 + L1MB3 LINE L1 5504 5687 -496 2297 159 59 12 chr18 11116622 11117031 -75560517 + MSTA LTR MaLR 1 428 0 3089 192 15 22 chr18 11117031 11117524 -75560024 + L1MB3 LINE L1 5687 6175 -8 2200 107 0 0 chr18 11118716 11119015 -75558533 + AluSx SINE Alu 1 299 -13 391 293 67 20 chr18 11119448 11119598 -75557950 - MIR SINE MIR -72 190 34 267 267 50 20 chr18 11119635 11119736 -75557812 + MIR SINE MIR 32 135 -127 2284 162 72 0 chr18 11121718 11122132 -75555416 - L1MB3 LINE L1 -28 6155 5712 2089 107 16 13 chr18 11122158 11122467 -75555081 - AluSx SINE Alu -2 310 1 503 240 117 13 chr18 11123982 11124136 -75553412 + MER5B DNA MER1_type 9 178 0 1124 255 130 24 chr18 11124270 11124694 -75552854 + HsTC2 DNA Tc2 84 552 -1346 767 234 67 32 chr18 11124746 11125058 -75552490 + HsTC2 DNA Tc2 1573 1895 -3 277 292 97 6 chr18 11125422 11125585 -75551963 + MIR SINE MIR 2 192 -70 1178 167 71 96 chr18 11125815 11125966 -75551582 + MER2 DNA MER2_type 1 154 -191 2292 65 0 3 chr18 11125966 11126259 -75551289 + AluY SINE Alu 1 292 -19 1178 167 71 96 chr18 11126259 11126461 -75551087 + MER2 DNA MER2_type 154 345 0 232 179 77 39 chr18 11126616 11126694 -75550854 + MLT1L LTR MaLR 527 607 -8 963 232 32 17 chr18 11127149 11127592 -75549956 - LTR39 LTR ERV1 0 783 265 1064 128 22 11 chr18 11127629 11127808 -75549740 - LTR39 LTR ERV1 -602 181 1 643 266 68 5 chr18 11128890 11129097 -75548451 + MIR SINE MIR 24 243 -19 4383 152 13 26 chr18 11129403 11130165 -75547383 + LTR1 LTR ERV1 1 752 -33 591 248 75 47 chr18 11130688 11130902 -75546646 - MIR SINE MIR 0 262 43 230 260 0 0 chr18 11130960 11131010 -75546538 - MIR SINE MIR -134 128 79 684 153 160 0 chr18 11131040 11131190 -75546358 - MLT1C LTR MaLR -230 237 64 218 267 17 0 chr18 11132186 11132246 -75545302 - MIR SINE MIR -67 141 81 850 153 120 0 chr18 11132330 11132480 -75545068 - MER69A DNA AcHobo -9 168 1 288 339 48 0 chr18 11132513 11132637 -75544911 - MIR3 SINE MIR 0 208 79 21 0 0 0 chr18 11132987 11133008 -75544540 + AT_rich Low_complexity Low_complexity 1 21 0 1938 144 6 21 chr18 11133026 11133359 -75544189 - L1PB3 LINE L1 -2 6152 5825 1545 226 232 36 chr18 11133404 11134050 -75543498 + LTR41 LTR ERVL 1 773 0 2347 74 0 3 chr18 11134396 11134695 -75542853 - AluY SINE Alu -13 298 1 201 228 13 101 chr18 11134751 11134830 -75542718 - L3b LINE CR1 -8 1575 1504 280 273 16 99 chr18 11135011 11135090 -75542458 - MIR3 SINE MIR -1 207 140 2545 107 28 14 chr18 11135090 11135446 -75542102 - THE1B LTR MaLR -3 361 1 280 273 16 99 chr18 11135446 11135487 -75542061 - MIR3 SINE MIR -68 140 97 33 32 0 32 chr18 11135670 11135696 -75541852 + AT_rich Low_complexity Low_complexity 1 26 -34 2146 88 0 20 chr18 11135696 11135993 -75541555 - AluY SINE Alu -20 291 1 33 32 0 32 chr18 11135993 11136028 -75541520 + AT_rich Low_complexity Low_complexity 26 60 0 370 193 12 0 chr18 11136459 11136542 -75541006 - MLT1E2 LTR MaLR 0 626 543 1427 240 70 15 chr18 11136549 11136949 -75540599 + MSTB LTR MaLR 4 425 -1 1018 238 150 87 chr18 11136981 11137468 -75540080 - MLT1E2 LTR MaLR -102 524 4 525 165 10 10 chr18 11137970 11138073 -75539475 - L1MC4 LINE L1 -9 8033 7931 241 274 119 35 chr18 11138130 11138289 -75539259 + MLT1E1 LTR MaLR 333 482 -142 2061 116 7 3 chr18 11138335 11138638 -75538910 - AluY SINE Alu -7 304 1 732 275 110 19 chr18 11138639 11139312 -75538236 - L1MC/D LINE L1 -743 5403 4711 876 203 0 0 chr18 11139343 11139506 -75538042 - FRAM SINE Alu -3 163 1 686 170 7 48 chr18 11139510 11139544 -75538004 - FLAM_C SINE Alu -169 143 109 2369 97 23 11 chr18 11139544 11139895 -75537653 - THE1A LTR MaLR 0 355 1 686 170 7 48 chr18 11139895 11140007 -75537541 - FLAM_C SINE Alu -203 109 3 260 304 0 0 chr18 11140064 11140143 -75537405 - L1MC/D LINE L1 -1549 4597 4519 309 267 0 11 chr18 11140187 11140277 -75537271 - L1M4 LINE L1 -1157 5691 5603 612 174 1 3 chr18 11140665 11140779 -75536769 - MLT1C LTR MaLR 0 467 371 6013 88 4 2 chr18 11140919 11141742 -75535806 + L1PA13 LINE L1 5339 6162 -1 2874 239 80 27 chr18 11142042 11142844 -75534704 - MER21B LTR ERV1 -1 862 19 272 187 0 93 chr18 11142875 11142950 -75534598 - MER21B LTR ERV1 -795 68 1 473 285 152 77 chr18 11143147 11143340 -75534208 - L1M4 LINE L1 -4285 2564 2387 2060 92 3 7 chr18 11143340 11143646 -75533902 - AluSq SINE Alu 0 305 1 473 285 152 77 chr18 11143646 11144189 -75533359 - L1M4 LINE L1 -4462 2387 1772 323 291 75 0 chr18 11147138 11147272 -75530276 - L1ME4a LINE L1 -3 6118 5975 214 214 18 18 chr18 11147334 11147390 -75530158 + (CATA)n Simple_repeat Simple_repeat 4 59 0 26 30 0 0 chr18 11147550 11147583 -75529965 + AT_rich Low_complexity Low_complexity 1 33 0 71 63 0 0 chr18 11147608 11147735 -75529813 + AT_rich Low_complexity Low_complexity 1 127 0 501 309 72 17 chr18 11147911 11148147 -75529401 - MLT1L LTR MaLR -3 612 364 299 184 106 31 chr18 11148189 11148286 -75529262 - MLT1J LTR MaLR -331 180 111 338 279 39 0 chr18 11150665 11150769 -75526779 + MER91A DNA MER1_type 3 110 -86 4775 77 14 20 chr18 11151060 11151712 -75525836 - L1PA7 LINE L1 0 6154 5507 487 282 123 36 chr18 11151810 11152222 -75525326 + L1ME4a LINE L1 5381 5828 -293 353 245 41 0 chr18 11152272 11152370 -75525178 + L1ME4a LINE L1 5963 6064 -57 387 273 195 19 chr18 11152850 11153004 -75524544 - MER5A DNA MER1_type 0 189 9 684 254 28 6 chr18 11153030 11153207 -75524341 - MER5A DNA MER1_type 0 189 9 498 266 171 0 chr18 11153240 11153398 -75524150 + MER5A DNA MER1_type 4 188 -1 2060 117 0 3 chr18 11154290 11154588 -75522960 + AluSg SINE Alu 1 297 -13 24 67 0 0 chr18 11155845 11155890 -75521658 + AT_rich Low_complexity Low_complexity 1 45 0 1256 147 81 4 chr18 11156433 11156850 -75520698 - LTR54 LTR ERV1 0 510 1 1630 142 18 14 chr18 11157657 11157971 -75519577 + AluJo SINE Alu 3 317 0 216 138 121 52 chr18 11158216 11158274 -75519274 + MIR SINE MIR 108 169 -93 447 248 18 9 chr18 11159449 11159562 -75517986 - MER81 DNA DNA 0 114 1 690 100 73 182 chr18 11159739 11159868 -75517680 + L1MA10 LINE L1 6108 6205 -129 2460 169 16 28 chr18 11159868 11159921 -75517627 + MSTB LTR MaLR 1 53 -373 1943 127 0 7 chr18 11159921 11160213 -75517335 + AluSx SINE Alu 1 290 -22 2460 169 16 28 chr18 11160213 11160590 -75516958 + MSTB LTR MaLR 53 426 0 690 100 73 182 chr18 11160590 11160680 -75516868 + L1MA10 LINE L1 6205 6303 -31 747 144 17 28 chr18 11160685 11160865 -75516683 + GA-rich Low_complexity Low_complexity 1 178 0 219 262 0 33 chr18 11164781 11164842 -75512706 - L2 LINE L2 -10 3303 3245 1710 131 8 4 chr18 11165278 11165538 -75512010 + AluSx SINE Alu 44 304 -8 236 282 12 47 chr18 11165567 11165652 -75511896 - MER63 DNA MER1_type -311 751 44 1900 165 3 0 chr18 11166335 11166644 -75510904 + 7SLRNA srpRNA srpRNA 1 310 -10 229 200 80 0 chr18 11166716 11166770 -75510778 - L1ME4a LINE L1 0 6121 6058 1863 160 3 0 chr18 11166770 11167082 -75510466 + AluSq SINE Alu 1 313 0 229 200 80 0 chr18 11167082 11167102 -75510446 - L1ME4a LINE L1 -63 6058 6041 2431 150 31 2 chr18 11167796 11168210 -75509338 - MSTA LTR MaLR -2 426 1 22 0 0 0 chr18 11169016 11169038 -75508510 + AT_rich Low_complexity Low_complexity 1 22 0 215 308 46 0 chr18 11169329 11169394 -75508154 - MIR SINE MIR -73 189 122 371 20 0 20 chr18 11169487 11169536 -75508012 + (CA)n Simple_repeat Simple_repeat 2 49 0 236 262 33 0 chr18 11169620 11169681 -75507867 + C-rich Low_complexity Low_complexity 1 63 0 196 339 0 0 chr18 11169935 11169994 -75507554 - L2 LINE L2 -14 3258 3200 228 308 0 0 chr18 11170892 11170957 -75506591 + G-rich Low_complexity Low_complexity 1 65 0 285 128 0 0 chr18 11171058 11171105 -75506443 + (TG)n Simple_repeat Simple_repeat 2 48 0 1213 163 40 16 chr18 11171887 11172138 -75505410 + L1MA8 LINE L1 6032 6288 -3 181 209 47 0 chr18 11172241 11172284 -75505264 - MIR SINE MIR -67 141 97 304 396 89 0 chr18 11172339 11172508 -75505040 - L2 LINE L2 -2032 1282 1099 508 291 42 12 chr18 11172593 11172758 -75504790 - MER5B DNA MER1_type 0 178 9 602 222 167 0 chr18 11172771 11172933 -75504615 + MER5A DNA MER1_type 1 189 0 380 217 25 61 chr18 11173466 11173624 -75503924 + MIR SINE MIR 19 166 -42 283 292 149 7 chr18 11173801 11173955 -75503593 + MIR SINE MIR 56 231 -31 298 284 34 0 chr18 11174230 11174318 -75503230 + MER5B DNA MER1_type 1 91 -87 21 36 0 0 chr18 11176412 11176440 -75501108 + AT_rich Low_complexity Low_complexity 1 28 0 1059 169 14 41 chr18 11176516 11176735 -75500813 + AluJo SINE Alu 87 299 -13 409 321 50 18 chr18 11176764 11176834 -75500714 - L1ME LINE L1 -378 5743 5677 2342 92 0 0 chr18 11176834 11177140 -75500408 - AluSx SINE Alu -6 306 1 409 321 50 18 chr18 11177140 11177287 -75500261 - L1ME LINE L1 -444 5677 5519 1930 127 6 43 chr18 11177795 11178148 -75499400 - AluJb SINE Alu 0 341 1 202 343 15 0 chr18 11178284 11178351 -75499197 + CT-rich Low_complexity Low_complexity 1 68 0 881 235 231 42 chr18 11178361 11178858 -75498690 - HAL1 LINE L1 -23 2484 1894 694 207 35 29 chr18 11178903 11179077 -75498471 - HAL1 LINE L1 -738 1769 1595 468 145 4 8 chr18 11179078 11179163 -75498385 - MLT1A1 LTR MaLR 0 365 296 272 269 15 0 chr18 11179444 11179511 -75498037 - MIR3 SINE MIR -1 207 140 600 301 73 30 chr18 11179853 11180155 -75497393 - L2 LINE L2 -665 2649 2335 475 307 19 34 chr18 11180346 11180551 -75496997 - L2 LINE L2 -1022 2292 2091 1543 163 20 40 chr18 11180969 11181269 -75496279 + AluJo SINE Alu 1 294 -18 740 282 80 52 chr18 11182124 11182648 -75494900 - L1ME4a LINE L1 -28 6093 5555 1031 203 5 0 chr18 11182654 11182851 -75494697 - L1MC1 LINE L1 -126 6207 6010 341 306 142 43 chr18 11182878 11182953 -75494595 - L1ME4a LINE L1 -558 5563 5497 2680 89 69 10 chr18 11182953 11183357 -75494191 + MSTA LTR MaLR 1 428 0 341 306 142 43 chr18 11183357 11183677 -75493871 - L1ME4a LINE L1 -624 5497 5135 643 318 48 28 chr18 11183715 11184115 -75493433 + L1ME4a LINE L1 5333 5740 -2068 343 308 0 0 chr18 11184132 11184223 -75493325 - MIR SINE MIR -6 256 166 262 324 141 5 chr18 11184224 11184437 -75493111 - MLT1L LTR MaLR -5 610 369 256 225 108 58 chr18 11184731 11184851 -75492697 + L1ME4a LINE L1 5736 5861 -260 2751 119 29 12 chr18 11184858 11185277 -75492271 - MSTB LTR MaLR 0 426 1 1889 139 0 7 chr18 11185285 11185580 -75491968 - AluSx SINE Alu -19 293 1 2266 171 84 43 chr18 11185795 11186280 -75491268 + MLT1D LTR MaLR 1 505 0 1984 104 0 7 chr18 11186402 11186682 -75490866 + AluSc SINE Alu 4 281 -28 414 0 0 0 chr18 11186682 11186728 -75490820 + (CA)n Simple_repeat Simple_repeat 2 47 0 363 293 168 24 chr18 11186785 11186952 -75490596 + MIR SINE MIR 11 201 -61 906 159 37 12 chr18 11186952 11187115 -75490433 - MER74B LTR ERVL 0 622 456 630 289 121 80 chr18 11187197 11187477 -75490071 - LTR16A1 LTR ERVL 0 457 151 1697 152 0 15 chr18 11187477 11187746 -75489802 + AluJo SINE Alu 1 265 -47 630 289 121 80 chr18 11187746 11187904 -75489644 - LTR16A1 LTR ERVL -306 151 1 1960 132 10 13 chr18 11188248 11188552 -75488996 - AluJo SINE Alu -9 303 1 1296 171 29 44 chr18 11188565 11188840 -75488708 - MLT1E3 LTR MaLR -9 615 345 1109 184 10 12 chr18 11188847 11189103 -75488445 + MLT1D-int LTR MaLR 1 375 -996 322 333 38 0 chr18 11189155 11189260 -75488288 - HERV16 LTR ERVL -4882 114 6 249 143 0 0 chr18 11189277 11189312 -75488236 - LTR16A1 LTR ERVL -12 445 411 362 303 66 25 chr18 11190491 11190613 -75486935 + L2 LINE L2 3142 3268 -4 308 350 70 14 chr18 11191157 11191300 -75486248 + L1ME4a LINE L1 5959 6109 -12 246 276 119 58 chr18 11191487 11191735 -75485813 + L1ME4a LINE L1 5795 6065 -56 1809 131 31 7 chr18 11191735 11192026 -75485522 - AluSq SINE Alu -15 298 1 246 276 119 58 chr18 11192026 11192070 -75485478 + L1ME4a LINE L1 6065 6105 -16 7158 57 15 19 chr18 11192116 11193142 -75484406 - L1PA6 LINE L1 0 6154 5134 2542 124 30 61 chr18 11193152 11193612 -75483936 - Tigger2 DNA MER2_type 0 2718 2273 469 79 32 0 chr18 11193606 11193669 -75483879 - Tigger2 DNA MER2_type -2653 65 1 * 279 246 0 18 chr18 11193929 11193986 -75483562 - L2 LINE L2 -9 3304 3249 378 278 102 37 chr18 11194228 11194415 -75483133 + MIR SINE MIR 13 211 -51 532 261 91 78 chr18 11195164 11195394 -75482154 + MIR SINE MIR 20 252 -10 920 185 39 17 chr18 11196132 11196364 -75481184 - L1MB8 LINE L1 -1 6177 5941 2126 145 28 35 chr18 11196390 11196428 -75481120 - L1MB4 LINE L1 -10 6170 6133 2277 86 0 13 chr18 11196428 11196731 -75480817 - AluY SINE Alu -12 299 1 2126 145 28 35 chr18 11196731 11197038 -75480510 - L1MB4 LINE L1 -47 6133 5826 1717 144 38 7 chr18 11197038 11197329 -75480219 + AluJb SINE Alu 1 300 -12 2126 145 28 35 chr18 11197329 11197376 -75480172 - L1MB4 LINE L1 -354 5826 5780 717 105 0 9 chr18 11197376 11197481 -75480067 - MER46A DNA MER2_type -1 235 132 350 163 50 12 chr18 11197481 11197561 -75479987 - L1MB4 LINE L1 -832 5336 5254 1029 179 0 0 chr18 11197562 11197758 -75479790 - L1MB4 LINE L1 -852 5294 5099 268 274 55 0 chr18 11198058 11198131 -75479417 - MLT1K LTR MaLR -2 586 510 1921 179 44 9 chr18 11198247 11198588 -75478960 + MLT1A1 LTR MaLR 9 361 -4 304 191 16 48 chr18 11198863 11198926 -75478622 - MLT1K LTR MaLR -80 508 448 321 215 46 0 chr18 11199199 11199264 -75478284 - MLT1K LTR MaLR -442 146 79 2372 84 3 0 chr18 11200248 11200558 -75476990 + AluSp SINE Alu 1 311 -2 1661 180 74 0 chr18 11200572 11200895 -75476653 - MER7A DNA MER2_type -1 345 1 1232 236 43 81 chr18 11201523 11201848 -75475700 - MER87 LTR ERV1 0 556 216 2088 108 3 7 chr18 11203122 11203418 -75474130 + AluSx SINE Alu 1 295 -17 2150 108 0 3 chr18 11204068 11204364 -75473184 + AluSc SINE Alu 1 295 -14 378 295 49 33 chr18 11205097 11205280 -75472268 - MIR SINE MIR -52 210 23 1796 125 0 48 chr18 11205449 11205760 -75471788 - AluJo SINE Alu -16 296 1 208 343 59 20 chr18 11206518 11206620 -75470928 + MIR3 SINE MIR 10 115 -93 339 265 24 84 chr18 11206656 11206822 -75470726 + LTR33 LTR ERVL 44 199 -322 2624 101 3 8 chr18 11206881 11207247 -75470301 - THE1B LTR MaLR 0 364 1 381 291 83 96 chr18 11208431 11208536 -75469012 + L2 LINE L2 2607 2712 -560 2034 123 3 0 chr18 11208536 11208828 -75468720 + AluSq SINE Alu 1 293 -20 381 291 83 96 chr18 11208828 11209215 -75468333 + L2 LINE L2 2712 3116 -156 375 279 71 14 chr18 11209259 11209399 -75468149 + MIR SINE MIR 105 252 -10 855 209 0 0 chr18 11209413 11209576 -75467972 + FRAM SINE Alu 1 160 -16 201 271 62 76 chr18 11209864 11210008 -75467540 - MIR SINE MIR -15 247 106 182 200 108 77 chr18 11210123 11210188 -75467360 + L2 LINE L2 3186 3252 -61 583 205 187 12 chr18 11210398 11210564 -75466984 - LTR16C LTR ERVL -20 471 277 262 257 171 0 chr18 11210566 11210636 -75466912 + MER58B DNA MER1_type 3 84 -257 248 26 0 53 chr18 11210639 11210677 -75466871 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 1375 85 43 0 chr18 11210677 11210865 -75466683 - AluSg/x SINE Alu -32 280 85 1049 207 39 19 chr18 11210865 11211121 -75466427 + MER58B DNA MER1_type 77 337 -4 241 299 75 9 chr18 11211169 11211276 -75466272 - LTR16C LTR ERVL -277 214 101 1457 203 0 28 chr18 11211608 11211928 -75465620 + AluJo SINE Alu 1 311 -1 300 255 47 28 chr18 11212447 11212553 -75464995 + L1 LINE L1 5290 5397 -749 1583 167 3 37 chr18 11212747 11213046 -75464502 - AluJo SINE Alu -17 295 7 355 273 71 49 chr18 11214165 11214277 -75463271 + L1MC4a LINE L1 5263 5371 -780 2138 118 3 0 chr18 11214277 11214573 -75462975 + AluSq SINE Alu 1 297 -16 355 273 71 49 chr18 11214573 11214844 -75462704 + L1MC4a LINE L1 5371 5659 -492 790 235 143 5 chr18 11214852 11215069 -75462479 + MLT1J LTR MaLR 2 248 -263 963 201 133 32 chr18 11215081 11215359 -75462189 + MLT1C LTR MaLR 162 467 0 271 341 15 8 chr18 11215359 11215491 -75462057 + L1MC4a LINE L1 5774 5906 -1902 1415 188 84 31 chr18 11215868 11216188 -75461360 + MLT1D LTR MaLR 1 337 -168 1953 130 3 13 chr18 11218894 11219195 -75458353 - AluSx SINE Alu -1 311 14 313 358 83 13 chr18 11219427 11219729 -75457819 - L1MC4 LINE L1 -318 7724 7402 241 251 97 93 chr18 11219750 11220029 -75457519 - L1MC4a LINE L1 -1245 6563 6284 360 299 104 67 chr18 11220112 11220440 -75457108 + HAL1 LINE L1 67 406 -2101 561 298 159 26 chr18 11220505 11220965 -75456583 + LTR33 LTR ERVL 1 521 0 344 289 82 33 chr18 11221012 11221282 -75456266 + HAL1 LINE L1 760 1042 -1465 1279 275 38 41 chr18 11221471 11222100 -75455448 + HAL1 LINE L1 1167 1793 -714 19564 162 14 15 chr18 11222420 11229423 -75448125 + L1PA14 LINE L1 4 7262 -337 1948 94 69 0 chr18 11229423 11229699 -75447849 + AluY SINE Alu 1 295 -16 19564 162 14 15 chr18 11229699 11230028 -75447520 + L1PA14 LINE L1 7262 7590 -9 291 276 0 79 chr18 11230032 11230078 -75447470 + L1MC4a LINE L1 5817 5865 -1943 1244 179 124 25 chr18 11230078 11230378 -75447170 - AluJo SINE Alu 0 312 1 291 276 0 79 chr18 11230378 11230458 -75447090 + L1MC4a LINE L1 5865 5933 -1875 699 169 114 0 chr18 11230527 11230693 -75446855 - MER53 DNA DNA -4 185 1 220 368 53 0 chr18 11231627 11231741 -75445807 - MIR3 SINE MIR -31 177 58 302 280 0 0 chr18 11232367 11232442 -75445106 + LTR16A1 LTR ERVL 383 457 0 809 111 8 16 chr18 11232472 11232598 -75444950 + FLAM_C SINE Alu 6 130 -13 742 231 84 5 chr18 11232637 11232840 -75444708 + L2 LINE L2 3094 3312 -1 185 412 10 0 chr18 11232814 11232916 -75444632 - L2 LINE L2 -11 3302 3200 * 339 237 0 13 chr18 11233276 11233352 -75444196 + MLT1L LTR MaLR 1 75 -540 554 234 47 41 chr18 11233359 11233530 -75444018 - MER63A DNA MER1_type 0 210 39 308 140 0 0 chr18 11233602 11233652 -75443896 + MLT1J LTR MaLR 91 140 -371 1986 107 20 10 chr18 11234247 11234568 -75442980 + AluSx SINE Alu 1 312 0 24 85 0 0 chr18 11235679 11235738 -75441810 + AT_rich Low_complexity Low_complexity 1 59 0 204 301 107 19 chr18 11235923 11236026 -75441522 + MIR SINE MIR 21 132 -76 1718 182 3 0 chr18 11236355 11236657 -75440891 + AluJb SINE Alu 1 303 -9 1017 307 66 32 chr18 11237268 11237354 -75440194 - MER115 DNA AcHobo 0 693 611 1549 160 41 0 chr18 11237354 11237623 -75439925 + AluJb SINE Alu 1 280 -32 878 116 14 0 chr18 11237623 11237769 -75439779 + (GGAA)n Simple_repeat Simple_repeat 1 148 0 1017 307 66 32 chr18 11237769 11238326 -75439222 - MER115 DNA AcHobo -81 612 1 1655 248 73 15 chr18 11238848 11239008 -75438540 + L1MC4a LINE L1 6443 6592 -1216 276 30 0 0 chr18 11239008 11239041 -75438507 + (TG)n Simple_repeat Simple_repeat 1 33 0 1655 248 73 15 chr18 11239041 11239416 -75438132 + L1MC4a LINE L1 6592 7009 -799 1233 223 53 40 chr18 11239418 11239743 -75437805 + L1MC4 LINE L1 7238 7570 -472 2229 77 0 0 chr18 11239743 11240029 -75437519 + AluSx SINE Alu 23 308 -4 1233 223 53 40 chr18 11240029 11240102 -75437446 + L1MC4 LINE L1 7570 7641 -401 2122 101 0 10 chr18 11240604 11240902 -75436646 + AluSc SINE Alu 1 295 -14 460 284 109 27 chr18 11241695 11241952 -75435596 + L1MC4 LINE L1 7623 7900 -142 1790 144 3 32 chr18 11242201 11242514 -75435034 - AluJo SINE Alu -8 304 1 832 155 24 18 chr18 11244162 11244330 -75433218 + L1PA16 LINE L1 5995 6163 -3 2052 238 16 7 chr18 11244371 11244917 -75432631 + L1 LINE L1 4261 4811 -1335 2231 104 0 0 chr18 11244946 11245114 -75432434 - AluSq SINE Alu -14 299 129 185 0 40 0 chr18 11245114 11245139 -75432409 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2231 104 0 0 chr18 11245139 11245269 -75432279 - AluSq SINE Alu -183 130 1 1087 198 3 131 chr18 11245269 11245480 -75432068 - LTR8A LTR ERV1 -413 314 155 1643 116 124 0 chr18 11245480 11245747 -75431801 + AluSx SINE Alu 11 310 -2 1087 198 3 131 chr18 11245747 11245855 -75431693 - LTR8A LTR ERV1 -572 155 35 1352 152 5 5 chr18 11245858 11246082 -75431466 + L1MB3 LINE L1 5601 5824 -347 1578 126 12 28 chr18 11246082 11246103 -75431445 + MER49 LTR ERV1 2 22 -901 1668 166 24 3 chr18 11246103 11246392 -75431156 + AluJb SINE Alu 1 295 -17 1578 126 12 28 chr18 11246392 11246625 -75430923 + MER49 LTR ERV1 22 252 -671 234 0 0 0 chr18 11246643 11246669 -75430879 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 505 126 0 29 chr18 11246704 11246815 -75430733 + MER4E LTR ERV1 69 284 -588 * 1189 226 66 17 chr18 11246813 11247100 -75430448 + MER4D LTR ERV1 547 847 -56 4611 132 14 20 chr18 11247100 11247242 -75430306 - MER50 LTR ERV1 -23 711 570 1873 92 41 48 chr18 11247242 11247537 -75430011 + AluSc SINE Alu 1 293 -16 4611 132 14 20 chr18 11247537 11248109 -75429439 - MER50 LTR ERV1 -164 570 1 280 125 18 36 chr18 11248114 11248170 -75429378 + MER4D LTR ERV1 849 903 0 1921 168 11 0 chr18 11248170 11248528 -75429020 + L1MB3 LINE L1 5820 6181 -2 1977 113 14 11 chr18 11248618 11248928 -75428620 + AluSq SINE Alu 1 311 0 575 268 259 13 chr18 11249594 11250149 -75427399 + L2 LINE L2 2614 3312 -1 761 272 120 59 chr18 11251013 11251520 -75426028 - MLT1H LTR MaLR 0 549 12 896 152 0 0 chr18 11251903 11252048 -75425500 + FRAM SINE Alu 20 164 -12 1742 136 31 11 chr18 11252229 11252516 -75425032 - AluJb SINE Alu -19 293 1 363 306 19 38 chr18 11252659 11252819 -75424729 - MIR SINE MIR -4 258 102 2179 108 0 10 chr18 11253662 11253968 -75423580 - AluSg SINE Alu -7 303 1 218 263 18 0 chr18 11255292 11255349 -75422199 + CT-rich Low_complexity Low_complexity 1 58 0 308 225 36 99 chr18 11255349 11255460 -75422088 - L1MCa LINE L1 -4317 2109 2006 1991 118 3 0 chr18 11255460 11255748 -75421800 - AluSx SINE Alu -23 289 1 272 192 39 0 chr18 11255770 11255848 -75421700 + (TATAA)n Simple_repeat Simple_repeat 4 84 0 807 153 15 22 chr18 11257200 11257337 -75420211 + AluJo SINE Alu 1 136 -176 255 311 40 0 chr18 11257383 11257457 -75420091 - L2 LINE L2 -275 2997 2921 1022 257 40 13 chr18 11258022 11258326 -75419222 + MER33 DNA MER1_type 13 324 0 227 314 51 25 chr18 11258470 11258588 -75418960 - LTR16C LTR ERVL -12 479 359 2136 163 29 13 chr18 11258714 11259094 -75418454 + MLT1D LTR MaLR 111 496 -9 249 152 0 202 chr18 11259985 11260084 -75417464 + MER91A DNA MER1_type 11 89 -101 2093 113 0 0 chr18 11260116 11260407 -75417141 + AluSx SINE Alu 1 291 -21 269 216 0 0 chr18 11260419 11260470 -75417078 + MER91B DNA MER1_type 80 130 -60 2292 100 0 0 chr18 11261498 11261807 -75415741 + AluSq SINE Alu 1 309 -4 1178 153 24 63 chr18 11262662 11262717 -75414831 + AluJo SINE Alu 68 124 -188 2061 122 0 3 chr18 11262717 11263011 -75414537 - AluSx SINE Alu -19 293 1 1178 153 24 63 chr18 11263011 11263210 -75414338 + AluJo SINE Alu 124 312 0 1774 172 0 0 chr18 11263219 11263522 -75414026 + AluJo SINE Alu 5 307 -5 182 79 0 79 chr18 11264225 11264263 -75413285 + (T)n Simple_repeat Simple_repeat 1 35 0 2359 66 0 7 chr18 11264417 11264718 -75412830 + AluSg SINE Alu 1 299 -11 1613 130 40 0 chr18 11264935 11265182 -75412366 - AluSq SINE Alu -10 303 47 474 83 0 0 chr18 11265183 11265243 -75412305 - AluS SINE Alu -220 93 34 733 173 68 0 chr18 11265417 11265550 -75411998 - MER5A DNA MER1_type 0 189 48 1932 138 7 0 chr18 11265632 11265921 -75411627 + AluSx SINE Alu 1 291 -21 1830 134 3 17 chr18 11265935 11266066 -75411482 + AluSx SINE Alu 4 135 -177 2210 101 0 3 chr18 11266066 11266362 -75411186 + AluSx SINE Alu 1 295 -17 1830 134 3 17 chr18 11266362 11266529 -75411019 + AluSx SINE Alu 135 298 -14 432 0 0 0 chr18 11267426 11267474 -75410074 + (TG)n Simple_repeat Simple_repeat 1 48 0 1719 106 0 0 chr18 11267581 11267818 -75409730 - AluY SINE Alu -74 237 1 475 209 0 0 chr18 11267818 11267904 -75409644 - AluS SINE Alu -225 87 2 1642 178 0 7 chr18 11267957 11268250 -75409298 - AluJo SINE Alu -21 291 1 1535 101 4 34 chr18 11268250 11268386 -75409162 + Tigger1 DNA MER2_type 1248 1376 -1042 2408 77 3 0 chr18 11268386 11268698 -75408850 - AluSp SINE Alu 0 313 1 1535 101 4 34 chr18 11268698 11268798 -75408750 + Tigger1 DNA MER2_type 1376 1477 -941 1628 149 46 7 chr18 11268799 11269081 -75408467 + AluJb SINE Alu 2 294 -18 2064 100 0 0 chr18 11269085 11269366 -75408182 + AluSx SINE Alu 27 307 -5 757 168 0 44 chr18 11269591 11269728 -75407820 - FLAM_C SINE Alu -1 132 2 240 203 63 51 chr18 11270110 11270189 -75407359 + LTR42 LTR ERVL 85 164 -331 217 0 61 0 chr18 11270685 11270718 -75406830 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 820 146 0 0 chr18 11272044 11272167 -75405381 - AluSq/x SINE Alu -189 123 1 1373 185 0 64 chr18 11272372 11272686 -75404862 - AluJo SINE Alu -18 294 1 2188 97 3 0 chr18 11273121 11273420 -75404128 + AluSx SINE Alu 1 300 -12 240 204 41 0 chr18 11273892 11273941 -75403607 + L2 LINE L2 3263 3313 0 485 372 75 10 chr18 11274306 11274690 -75402858 - L2 LINE L2 -743 2571 2163 539 214 0 53 chr18 11274723 11274854 -75402694 + FLAM_A SINE Alu 13 136 -6 2223 103 3 0 chr18 11274885 11275187 -75402361 + AluSq SINE Alu 1 303 -10 204 40 0 0 chr18 11277413 11277438 -75400110 + (GA)n Simple_repeat Simple_repeat 2 26 0 278 231 33 60 chr18 11277509 11277691 -75399857 + (CAGAGA)n Simple_repeat Simple_repeat 2 178 0 519 232 16 0 chr18 11278362 11278487 -75399061 - MER94 DNA DNA -7 127 1 1052 146 6 0 chr18 11278784 11278949 -75398599 + AluSx SINE Alu 1 166 -146 355 271 186 0 chr18 11280521 11280650 -75396898 - MIR3 SINE MIR -24 184 32 415 104 52 0 chr18 11280787 11280864 -75396684 + Tigger1 DNA MER2_type 146 226 -2192 1234 141 0 45 chr18 11280864 11281025 -75396523 - AluJo SINE Alu -18 294 127 1754 140 27 0 chr18 11281025 11281317 -75396231 - AluSp SINE Alu -11 302 3 1234 141 0 45 chr18 11281317 11281349 -75396199 - AluJo SINE Alu -185 127 110 1673 167 38 0 chr18 11281349 11281642 -75395906 + AluJb SINE Alu 1 304 -8 1234 141 0 45 chr18 11281642 11281667 -75395881 - AluJo SINE Alu -202 110 85 571 250 32 0 chr18 11281674 11281798 -75395750 - FAM SINE Alu -57 128 1 514 103 47 103 chr18 11281798 11281855 -75395693 + Tigger1 DNA MER2_type 1166 1217 -1201 2058 113 0 0 chr18 11281855 11282172 -75395376 + AluSx SINE Alu 1 317 0 514 103 47 103 chr18 11282172 11282220 -75395328 + Tigger1 DNA MER2_type 1217 1266 -1152 1216 213 0 0 chr18 11282224 11282464 -75395084 - AluJb SINE Alu 0 312 73 180 0 0 0 chr18 11282464 11282484 -75395064 + (T)n Simple_repeat Simple_repeat 1 20 0 1522 190 52 0 chr18 11282715 11283004 -75394544 + AluJo SINE Alu 1 304 -8 190 326 155 16 chr18 11284651 11284838 -75392710 + MIR SINE MIR 20 232 -30 224 275 184 9 chr18 11284877 11284986 -75392562 - MIR SINE MIR -60 148 21 214 320 90 0 chr18 11285292 11285370 -75392178 - MIR SINE MIR -66 142 58 436 259 5 10 chr18 11286422 11286615 -75390933 + L1 LINE L1 4280 4471 -1675 1901 102 7 14 chr18 11286616 11286899 -75390649 + AluSc SINE Alu 1 281 -28 830 118 0 44 chr18 11287536 11287672 -75389876 + FLAM_C SINE Alu 1 130 -3 339 25 0 0 chr18 11287844 11287884 -75389664 + (CA)n Simple_repeat Simple_repeat 2 41 0 186 43 0 0 chr18 11288364 11288387 -75389161 + (CTA)n Simple_repeat Simple_repeat 1 23 0 224 154 103 0 chr18 11288390 11288429 -75389119 - MIR SINE MIR -7 255 213 2379 80 0 0 chr18 11288771 11289082 -75388466 + AluY SINE Alu 1 311 0 200 326 58 12 chr18 11289169 11289255 -75388293 + L2 LINE L2 3133 3222 -50 312 200 80 27 chr18 11290329 11290404 -75387144 + L2 LINE L2 3186 3264 -8 439 335 11 28 chr18 11290766 11290948 -75386600 - MER5A DNA MER1_type -7 182 4 319 312 105 33 chr18 11291501 11292051 -75385497 + L1M4c LINE L1 1109 1669 -838 331 341 0 8 chr18 11292402 11292534 -75385014 - LTR16C LTR ERVL -8 483 353 2432 224 49 48 chr18 11292684 11293493 -75384055 + L1MC1 LINE L1 3737 4546 -1600 1925 223 22 46 chr18 11293495 11294086 -75383462 + L1MC1 LINE L1 4700 5276 -870 281 91 159 0 chr18 11294086 11294130 -75383418 + Alu SINE Alu 1 51 -252 545 249 101 34 chr18 11294230 11294278 -75383270 - L1M4 LINE L1 -779 6327 6284 1716 147 0 44 chr18 11294278 11294571 -75382977 - AluSx SINE Alu -32 280 1 545 249 101 34 chr18 11294571 11294819 -75382729 - L1M4 LINE L1 -822 6284 6011 809 124 0 0 chr18 11294823 11294936 -75382612 + AluJb SINE Alu 5 117 -195 534 202 64 49 chr18 11294950 11295153 -75382395 - L1M4 LINE L1 -1082 6024 5819 1915 259 117 28 chr18 11295239 11295872 -75381676 + L1MDa LINE L1 176 864 -5676 248 298 0 29 chr18 11296996 11297100 -75380448 + T-rich Low_complexity Low_complexity 2 102 0 211 167 0 0 chr18 11297312 11297348 -75380200 - L2 LINE L2 0 3313 3278 243 167 167 20 chr18 11297709 11297811 -75379737 - L1M4 LINE L1 -2849 4257 4141 * 2166 228 41 55 chr18 11297792 11298682 -75378866 - L1M4 LINE L1 -4684 2353 1455 4814 175 36 10 chr18 11300316 11301234 -75376314 + L1MC1 LINE L1 5379 6320 -13 2356 191 36 17 chr18 11301232 11301765 -75375783 + L1MB2 LINE L1 5593 6135 -36 * 360 240 0 58 chr18 11302302 11302406 -75375142 + MER5A DNA MER1_type 9 106 -83 2337 50 10 0 chr18 11302442 11302742 -75374806 + AluY SINE Alu 1 303 -8 313 267 95 0 chr18 11303085 11303201 -75374347 - L1MEc LINE L1 -4708 1507 1381 1411 240 98 7 chr18 11303303 11303753 -75373795 - L1MDa LINE L1 -2085 4455 3965 2858 204 100 22 chr18 11303770 11304710 -75372838 - L1MDa LINE L1 -4161 2379 1367 530 173 0 9 chr18 11304706 11304816 -75372732 - L1MDa LINE L1 -5437 1103 995 * 1952 97 21 4 chr18 11305090 11305393 -75372155 - AluSx SINE Alu 0 308 1 818 276 145 63 chr18 11306562 11307627 -75369921 - L1MEc LINE L1 -5116 1280 121 991 206 126 29 chr18 11307771 11308145 -75369403 - L1ME3A LINE L1 -46 6118 5727 425 307 123 22 chr18 11308263 11308479 -75369069 + L1 LINE L1 3985 4178 -1968 7395 130 25 16 chr18 11308479 11309698 -75367850 + Tigger3b DNA MER2_type 2 1231 0 425 307 123 22 chr18 11309698 11309869 -75367679 + L1 LINE L1 4178 4415 -1731 243 191 48 0 chr18 11309869 11309932 -75367616 + MLT1I LTR MaLR 324 389 -20 1435 227 54 37 chr18 11310187 11310255 -75367293 + L1M4 LINE L1 2176 2241 -3905 2712 26 3 10 chr18 11310255 11310565 -75366983 + AluY SINE Alu 1 308 -3 1435 227 54 37 chr18 11310565 11310959 -75366589 + L1M4 LINE L1 2241 2646 -3500 2198 244 65 53 chr18 11310969 11311087 -75366461 + L1M4 LINE L1 3230 3345 -2801 2256 102 3 0 chr18 11311087 11311393 -75366155 + AluSp SINE Alu 1 307 0 2198 244 65 53 chr18 11311393 11312178 -75365370 + L1M4 LINE L1 3345 4145 -2001 2477 148 31 17 chr18 11312373 11312793 -75364755 - MSTB LTR MaLR 0 426 1 219 238 48 16 chr18 11312851 11312914 -75364634 + L2 LINE L2 3247 3311 -2 6413 185 27 7 chr18 11313119 11315294 -75362254 - L1MC1 LINE L1 -4 6329 4108 2266 128 0 3 chr18 11315410 11315723 -75361825 - AluSx SINE Alu 0 312 1 885 185 26 11 chr18 11315825 11316014 -75361534 + L1MC3 LINE L1 7586 7777 -8 2275 102 0 3 chr18 11316364 11316658 -75360890 - AluSx SINE Alu -19 293 1 725 262 208 42 chr18 11316743 11317128 -75360420 + LTR16A LTR ERVL 2 450 0 289 344 40 0 chr18 11317172 11317297 -75360251 + LTR33A LTR ERVL 60 189 -334 310 159 72 0 chr18 11317725 11317794 -75359754 - L1MA9 LINE L1 -32 6280 6207 2226 127 3 0 chr18 11317891 11318191 -75359357 - AluSx SINE Alu -11 301 1 44783 41 2 2 chr18 11318896 11325048 -75352500 - L1PA4 LINE L1 -5 6150 2 917 266 119 35 chr18 11325143 11325546 -75352002 + HAL1 LINE L1 47 483 -2024 459 188 55 66 chr18 11325647 11325823 -75351725 - L1M LINE L1 -735 5427 5246 428 252 57 50 chr18 11325886 11326067 -75351481 - L1M4 LINE L1 -1074 5072 4890 2222 129 0 3 chr18 11326457 11326768 -75350780 + AluSq SINE Alu 2 311 -2 25 31 0 0 chr18 11326823 11326855 -75350693 + AT_rich Low_complexity Low_complexity 1 32 0 1730 313 92 37 chr18 11327209 11327346 -75350202 - ERVL LTR ERVL -1845 3919 3791 233 29 29 0 chr18 11327346 11327380 -75350168 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2280 84 0 11 chr18 11327385 11327672 -75349876 - AluY SINE Alu -27 284 1 1730 313 92 37 chr18 11327672 11328277 -75349271 - ERVL LTR ERVL -1976 3788 3218 1877 171 0 3 chr18 11328277 11328576 -75348972 + AluJb SINE Alu 1 298 -14 1730 313 92 37 chr18 11328576 11329331 -75348217 - ERVL LTR ERVL -2546 3218 2297 239 200 0 17 chr18 11330368 11330428 -75347120 + GA-rich Low_complexity Low_complexity 4 62 0 33 43 0 0 chr18 11331250 11331297 -75346251 + AT_rich Low_complexity Low_complexity 1 47 0 1732 192 13 0 chr18 11331393 11331695 -75345853 + AluJo SINE Alu 1 306 -6 1895 135 53 0 chr18 11333296 11333577 -75343971 - AluSq SINE Alu -17 296 1 2132 108 7 3 chr18 11333622 11333917 -75343631 - AluSx SINE Alu -16 296 1 2105 164 51 0 chr18 11334757 11335128 -75342420 - MLT1B LTR MaLR 0 390 1 9384 221 29 36 chr18 11335704 11336802 -75340746 + L1M4 LINE L1 2614 3719 -2427 1892 115 89 0 chr18 11336802 11337071 -75340477 + AluSx SINE Alu 1 293 -19 9384 221 29 36 chr18 11337071 11337303 -75340245 + L1M4 LINE L1 3719 3951 -2195 1001 126 68 34 chr18 11337303 11337510 -75340038 + L1MA8 LINE L1 6072 6285 -6 9384 221 29 36 chr18 11337510 11338756 -75338792 + L1M4 LINE L1 3951 5172 -974 2087 108 35 0 chr18 11338860 11339146 -75338402 - AluSx SINE Alu -16 296 1 1469 144 136 24 chr18 11339259 11339546 -75338002 + L1MC1 LINE L1 6013 6323 -10 228 240 0 0 chr18 11339546 11339596 -75337952 + PABL_B LTR ERV1 1 50 -617 287 203 0 0 chr18 11339870 11339934 -75337614 + L1M4 LINE L1 3856 3919 -2227 799 141 26 26 chr18 11340124 11340280 -75337268 + PABL_B LTR ERV1 512 667 0 2360 101 0 10 chr18 11340303 11340609 -75336939 + AluSq SINE Alu 1 303 -10 1458 221 40 37 chr18 11341142 11341518 -75336030 - MLT1C LTR MaLR -84 383 7 1686 161 0 0 chr18 11341907 11342162 -75335386 - AluJb SINE Alu -20 292 38 2226 84 47 0 chr18 11342181 11342477 -75335071 - AluSp SINE Alu -1 312 3 2627 273 116 13 chr18 11342676 11342797 -75334751 + MER69B DNA AcHobo 6 113 -2413 2031 117 37 7 chr18 11342797 11343269 -75334279 + AluSx SINE Alu 1 481 0 234 0 0 0 chr18 11343268 11343294 -75334254 + (GGAA)n Simple_repeat Simple_repeat 3 28 0 2627 273 116 13 chr18 11343269 11344069 -75333479 + MER69B DNA AcHobo 113 995 -231 1063 111 0 0 chr18 11344069 11344204 -75333344 + AluSq/x SINE Alu 1 135 -177 1999 148 7 0 chr18 11344204 11344501 -75333047 + AluSq SINE Alu 1 299 -14 248 257 104 28 chr18 11344501 11344556 -75332992 + MER69B DNA AcHobo 985 1034 -1492 2391 65 4 0 chr18 11344556 11344833 -75332715 + AluY SINE Alu 10 287 -24 231 36 0 0 chr18 11344833 11344861 -75332687 + (TA)n Simple_repeat Simple_repeat 2 29 0 248 257 104 28 chr18 11344861 11344948 -75332600 + MER69B DNA AcHobo 1033 1139 -87 1701 228 49 15 chr18 11344948 11345338 -75332210 + LTR40a LTR ERVL 1 403 -116 698 176 66 0 chr18 11345364 11345514 -75332034 + LTR40b LTR ERVL 308 462 0 439 214 11 0 chr18 11345514 11345602 -75331946 + MER69B DNA AcHobo 1135 1223 -3 523 329 72 17 chr18 11345912 11346204 -75331344 - MLT1L LTR MaLR 0 615 308 2026 157 0 6 chr18 11346243 11346555 -75330993 - AluJo SINE Alu -1 311 2 23 0 0 0 chr18 11346562 11346585 -75330963 + AT_rich Low_complexity Low_complexity 1 23 0 1110 199 11 88 chr18 11346586 11346858 -75330690 - AluJb SINE Alu -27 285 35 658 242 37 77 chr18 11346862 11347160 -75330388 - MLT1L LTR MaLR -326 289 4 2083 166 47 27 chr18 11347417 11347621 -75329927 + Tigger6a DNA MER2_type 3 201 -1396 1694 172 73 49 chr18 11347621 11348006 -75329542 - LTR52 LTR ERVL -3 418 21 2089 131 0 3 chr18 11348006 11348297 -75329251 + AluSg SINE Alu 1 290 -20 1694 172 73 49 chr18 11348297 11348319 -75329229 - LTR52 LTR ERVL -400 21 1 2083 166 47 27 chr18 11348319 11348517 -75329031 + Tigger6a DNA MER2_type 201 413 -1184 1915 260 61 46 chr18 11348714 11349068 -75328480 + L1MEc LINE L1 1254 1601 -4795 1913 151 4 0 chr18 11349068 11349346 -75328202 + AluJb SINE Alu 1 279 -33 342 67 0 0 chr18 11349351 11349396 -75328152 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 1915 260 61 46 chr18 11349396 11349834 -75327714 + L1MEc LINE L1 1604 2064 -4332 454 209 33 22 chr18 11349834 11349925 -75327623 + Charlie1 DNA MER1_type 1 92 -2669 1895 180 14 49 chr18 11349928 11350220 -75327328 + Tigger6a DNA MER2_type 398 699 -898 2310 114 0 0 chr18 11350220 11350527 -75327021 + AluSx SINE Alu 1 307 -5 1895 180 14 49 chr18 11350527 11350610 -75326938 + Tigger6a DNA MER2_type 699 759 -838 1985 167 0 0 chr18 11350610 11350916 -75326632 + AluJb SINE Alu 1 306 -6 1895 180 14 49 chr18 11350916 11350967 -75326581 + Tigger6a DNA MER2_type 759 810 -273 783 167 0 23 chr18 11350968 11351100 -75326448 - FLAM_C SINE Alu -13 130 2 1137 222 17 14 chr18 11351101 11351389 -75326159 + Tigger6a DNA MER2_type 795 1083 0 2121 129 36 39 chr18 11351649 11352013 -75325535 - THE1B LTR MaLR -1 363 1 286 242 15 0 chr18 11352245 11352311 -75325237 - L2 LINE L2 0 3313 3247 1450 121 12 31 chr18 11352330 11352416 -75325132 + Tigger7 DNA MER2_type 2232 2318 -173 2351 142 36 48 chr18 11352416 11352756 -75324792 - Tigger2a DNA MER2_type -2275 433 98 204 40 0 0 chr18 11352756 11352781 -75324767 + (GGA)n Simple_repeat Simple_repeat 2 26 0 2351 142 36 48 chr18 11352781 11352878 -75324670 - Tigger2a DNA MER2_type -2610 98 1 1450 121 12 31 chr18 11352878 11353047 -75324501 + Tigger7 DNA MER2_type 2318 2482 -9 1577 177 6 40 chr18 11353511 11353858 -75323690 + AluJo SINE Alu 1 336 0 36 82 0 0 chr18 11355009 11355094 -75322454 + GC_rich Low_complexity Low_complexity 1 85 0 195 42 0 0 chr18 11355168 11355192 -75322356 + (CGG)n Simple_repeat Simple_repeat 1 24 0 236 225 7 73 chr18 11355319 11355470 -75322078 + G-rich Low_complexity Low_complexity 5 145 0 316 274 0 32 chr18 11357722 11357817 -75319731 - L2 LINE L2 -5 3267 3176 29 0 0 0 chr18 11358342 11358371 -75319177 + AT_rich Low_complexity Low_complexity 1 29 0 1801 156 54 0 chr18 11358371 11358637 -75318911 - AluJo SINE Alu -1 311 1 320 267 30 20 chr18 11359402 11359503 -75318045 + MIR SINE MIR 20 121 -87 360 43 0 0 chr18 11359508 11359554 -75317994 + (TAG)n Simple_repeat Simple_repeat 1 46 0 282 226 21 54 chr18 11359613 11359706 -75317842 - MIR SINE MIR -113 149 60 195 42 0 0 chr18 11360188 11360212 -75317336 + (A)n Simple_repeat Simple_repeat 1 24 0 2314 106 0 3 chr18 11360255 11360566 -75316982 - AluSg SINE Alu 0 310 1 189 0 0 0 chr18 11362062 11362083 -75315465 + (A)n Simple_repeat Simple_repeat 1 21 0 1449 122 0 36 chr18 11362402 11362624 -75314924 + AluJb SINE Alu 82 295 -17 583 292 56 26 chr18 11363414 11363647 -75313901 + MIR SINE MIR 1 240 -22 2345 97 0 10 chr18 11364185 11364493 -75313055 - AluY SINE Alu -6 305 1 292 268 20 65 chr18 11365318 11365471 -75312077 + MIR SINE MIR 49 194 -68 1361 167 68 16 chr18 11365549 11365800 -75311748 + AluJo SINE Alu 6 269 -43 285 98 0 0 chr18 11365801 11365842 -75311706 + (T)n Simple_repeat Simple_repeat 1 41 0 197 250 0 0 chr18 11366357 11366405 -75311143 - L2 LINE L2 -19 3253 3206 1374 133 22 4 chr18 11367291 11367516 -75310032 - L1PA15 LINE L1 0 6165 5937 8341 68 11 11 chr18 11367988 11369059 -75308489 - MER11C LTR ERVK 0 1071 1 191 268 0 0 chr18 11373943 11373984 -75303564 + L2 LINE L2 3268 3308 -5 3474 132 58 14 chr18 11375745 11376327 -75301221 - MER4B LTR ERV1 0 610 3 2036 144 0 10 chr18 11376558 11376871 -75300677 - AluSx SINE Alu -2 310 1 192 109 0 87 chr18 11377050 11377096 -75300452 - MIR SINE MIR -119 143 102 2181 109 17 13 chr18 11377682 11377984 -75299564 + AluSx SINE Alu 1 303 -9 825 145 0 0 chr18 11379839 11379956 -75297592 + FLAM_C SINE Alu 1 117 -16 180 0 0 0 chr18 11379965 11379985 -75297563 + (T)n Simple_repeat Simple_repeat 1 20 0 278 148 12 49 chr18 11380620 11380701 -75296847 - L1ME4a LINE L1 -1 6120 6043 22 35 0 0 chr18 11381365 11381394 -75296154 + AT_rich Low_complexity Low_complexity 1 29 0 1709 144 16 64 chr18 11382664 11382977 -75294571 + AluJo SINE Alu 1 298 -14 25 31 0 0 chr18 11383045 11383077 -75294471 + AT_rich Low_complexity Low_complexity 1 32 0 22 56 0 0 chr18 11383246 11383282 -75294266 + AT_rich Low_complexity Low_complexity 1 36 0 2463 111 92 10 chr18 11383294 11383611 -75293937 - Tigger2 DNA MER2_type 0 2718 2362 198 0 0 0 chr18 11383611 11383633 -75293915 + (GGA)n Simple_repeat Simple_repeat 2 23 0 2463 111 92 10 chr18 11383633 11383704 -75293844 - Tigger2 DNA MER2_type -356 2362 2298 366 172 47 0 chr18 11383713 11383777 -75293771 - Tigger2 DNA MER2_type -2651 67 1 339 25 0 0 chr18 11384827 11384867 -75292681 + (T)n Simple_repeat Simple_repeat 1 40 0 2376 200 62 9 chr18 11385170 11385701 -75291847 + L1MB3 LINE L1 5563 6121 -62 446 239 168 6 chr18 11385779 11385946 -75291602 + LTR50 LTR ERVL 3 196 -599 301 175 117 33 chr18 11386174 11386294 -75291254 + LTR50 LTR ERVL 502 631 -164 242 180 33 16 chr18 11386322 11386383 -75291165 + LTR33A LTR ERVL 446 507 -16 2196 92 7 0 chr18 11386668 11386941 -75290607 - AluSq SINE Alu -36 277 3 1725 143 49 3 chr18 11387190 11387477 -75290071 - AluSq SINE Alu -13 300 1 219 36 0 0 chr18 11387512 11387540 -75290008 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1656 136 59 7 chr18 11387544 11387816 -75289732 - AluJb SINE Alu -26 286 1 399 283 96 51 chr18 11388723 11389016 -75288532 + L2 LINE L2 2213 2518 -796 300 269 29 19 chr18 11389316 11389420 -75288128 - MIR SINE MIR -82 126 22 1874 139 13 26 chr18 11389653 11389956 -75287592 - AluJb SINE Alu -13 299 1 2801 237 78 34 chr18 11389959 11390056 -75287492 + L1M4 LINE L1 2110 2201 -3945 2296 103 3 0 chr18 11390056 11390358 -75287190 - AluSg SINE Alu -7 303 1 2801 237 78 34 chr18 11390358 11391079 -75286469 + L1M4 LINE L1 2201 2986 -3160 1665 101 5 0 chr18 11391079 11391297 -75286251 + AluSq SINE Alu 83 301 -12 2801 237 78 34 chr18 11391297 11391518 -75286030 + L1M4 LINE L1 2986 3196 -2950 2844 150 35 35 chr18 11391525 11392072 -75285476 + L1MB3 LINE L1 5285 5831 -352 22 0 0 0 chr18 11392081 11392103 -75285445 + AT_rich Low_complexity Low_complexity 1 22 0 13594 100 10 73 chr18 11392104 11394601 -75282947 + L1PA7 LINE L1 1 2655 -3806 2218 115 3 3 chr18 11394601 11394897 -75282651 + AluSx SINE Alu 1 296 -16 13594 100 10 73 chr18 11394897 11394995 -75282553 + L1PA7 LINE L1 2655 2758 -3703 270 79 0 0 chr18 11394995 11395033 -75282515 + AluSp/q SINE Alu 256 293 -10 13594 100 10 73 chr18 11395033 11395434 -75282114 + L1PA7 LINE L1 2758 2897 -3564 11081 78 5 5 chr18 11395435 11397701 -75279847 + L1PA7 LINE L1 4174 6463 -6 35 41 0 0 chr18 11397701 11397750 -75279798 + AT_rich Low_complexity Low_complexity 1 49 0 697 159 18 0 chr18 11397773 11397912 -75279636 - FLAM_C SINE Alu 0 142 2 333 254 44 81 chr18 11397913 11398032 -75279516 + L1M4 LINE L1 3215 3322 -2824 2058 109 36 0 chr18 11398032 11398307 -75279241 + AluSc SINE Alu 1 285 -24 333 254 44 81 chr18 11398307 11398435 -75279113 + L1M4 LINE L1 3322 3453 -2693 1217 245 123 20 chr18 11398437 11398926 -75278622 + L1M4 LINE L1 3978 4516 -1630 1577 208 79 37 chr18 11398928 11399114 -75278434 + L1M4 LINE L1 4589 4766 -1380 620 176 65 0 chr18 11399114 11399292 -75278256 + FLAM_A SINE Alu 1 185 0 1577 208 79 37 chr18 11399292 11399559 -75277989 + L1M4 LINE L1 4766 5064 -1082 2069 136 7 0 chr18 11400991 11401299 -75276249 + AluSx SINE Alu 1 310 -2 307 143 16 16 chr18 11401810 11401873 -75275675 - L1ME3A LINE L1 -14 6156 6094 518 261 19 0 chr18 11401941 11402098 -75275450 - L1ME3A LINE L1 -203 5967 5808 1668 125 47 8 chr18 11402312 11402568 -75274980 + AluSx SINE Alu 37 302 -10 1951 148 10 23 chr18 11404020 11404324 -75273224 + AluJb SINE Alu 5 304 -8 29 28 0 0 chr18 11406086 11406122 -75271426 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr18 11406239 11406260 -75271288 + AT_rich Low_complexity Low_complexity 1 21 0 1334 151 5 9 chr18 11406313 11406531 -75271017 + AluJo SINE Alu 87 303 -9 184 278 19 0 chr18 11406950 11407004 -75270544 + L2 LINE L2 3136 3190 -82 299 161 0 16 chr18 11407036 11407098 -75270450 + GA-rich Low_complexity Low_complexity 4 64 0 207 357 32 19 chr18 11408378 11408532 -75269016 - MIR SINE MIR -38 224 69 432 0 0 0 chr18 11409723 11409771 -75267777 + (TG)n Simple_repeat Simple_repeat 2 49 0 593 197 150 16 chr18 11410091 11410284 -75267264 + L1MB8 LINE L1 4947 5165 -981 452 94 16 0 chr18 11410288 11410352 -75267196 + AluJo SINE Alu 72 136 -176 1846 153 37 27 chr18 11410352 11410785 -75266763 + L1MB8 LINE L1 5159 5592 -586 3726 113 70 25 chr18 11410785 11411385 -75266163 - MER51A LTR ERV1 0 634 8 1086 188 38 114 chr18 11411389 11411630 -75265918 + L1MB8 LINE L1 5589 5794 -384 2490 90 0 3 chr18 11411630 11411940 -75265608 + AluSx SINE Alu 1 309 -3 1086 188 38 114 chr18 11411940 11412065 -75265483 + L1MB8 LINE L1 5794 5927 -251 2262 184 16 16 chr18 11412582 11413027 -75264521 - MER65A LTR ERV1 0 445 1 5243 210 70 44 chr18 11413028 11413090 -75264458 - MER65A-int LTR ERV1 -1 4870 4811 668 219 0 8 chr18 11413090 11413218 -75264330 - FLAM_A SINE Alu -5 128 2 5243 210 70 44 chr18 11413218 11413803 -75263745 - MER65A-int LTR ERV1 -60 4811 4243 2096 122 7 0 chr18 11413803 11414097 -75263451 - AluSq SINE Alu -17 296 1 5243 210 70 44 chr18 11414097 11414684 -75262864 - MER65A-int LTR ERV1 -628 4243 3603 1742 179 62 16 chr18 11414693 11415237 -75262311 - MER4-int LTR ERV1 -846 5393 2945 830 207 0 47 chr18 11415229 11415461 -75262087 - MER4-int LTR ERV1 -2648 3950 3730 * 339 140 0 0 chr18 11415541 11415591 -75261957 - MER4-int LTR ERV1 -2868 3730 3681 2223 98 29 13 chr18 11415601 11415908 -75261640 + AluSx SINE Alu 1 312 0 1444 204 41 57 chr18 11416021 11416493 -75261055 - L1ME LINE L1 -502 5664 5204 4196 114 23 0 chr18 11416506 11417122 -75260426 - L1PB2 LINE L1 0 6151 5522 696 110 0 0 chr18 11417242 11417342 -75260206 + AluSg/x SINE Alu 205 304 -5 1547 213 82 50 chr18 11417457 11417880 -75259668 - MLT1D LTR MaLR -18 608 77 1936 125 54 41 chr18 11417880 11418248 -75259300 - THE1C LTR MaLR 0 375 3 1547 213 82 50 chr18 11418248 11418328 -75259220 - MLT1D LTR MaLR -549 77 1 239 164 91 0 chr18 11419502 11419557 -75257991 - MER3 DNA MER1_type -15 194 135 560 236 76 0 chr18 11419569 11419726 -75257822 - MER3 DNA MER1_type -86 123 2 290 113 113 19 chr18 11419839 11419892 -75257656 - MER58B DNA MER1_type -8 333 276 315 193 0 0 chr18 11419916 11419973 -75257575 - MER58B DNA MER1_type -34 307 251 244 291 126 29 chr18 11420830 11420933 -75256615 - MIR SINE MIR -116 146 34 2015 94 0 14 chr18 11422182 11422458 -75255090 + AluY SINE Alu 39 310 -1 212 293 24 12 chr18 11422560 11422642 -75254906 + MIR3 SINE MIR 106 188 -20 207 260 220 13 chr18 11422825 11422975 -75254573 - MIR SINE MIR -11 251 71 1384 219 100 61 chr18 11424049 11424511 -75253037 - L1MCb LINE L1 -5563 482 3 231 342 105 0 chr18 11424725 11424839 -75252709 + L2 LINE L2 3146 3271 -1 1692 193 0 13 chr18 11425151 11425452 -75252096 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr18 11425704 11425725 -75251823 + AT_rich Low_complexity Low_complexity 1 21 0 724 217 13 0 chr18 11425875 11426032 -75251516 + MER5A DNA MER1_type 30 188 -1 2114 153 97 0 chr18 11426284 11426644 -75250904 + MSTA LTR MaLR 34 428 0 259 280 0 13 chr18 11426858 11426933 -75250615 - MER5A DNA MER1_type -109 80 7 357 388 8 0 chr18 11426967 11427096 -75250452 - L2 LINE L2 0 3272 3143 309 221 0 0 chr18 11427458 11427526 -75250022 + MIR SINE MIR 48 115 -147 583 146 11 0 chr18 11427530 11427619 -75249929 - MER4B LTR ERV1 0 610 521 236 347 73 8 chr18 11428475 11428599 -75248949 - L2 LINE L2 -5 3267 3136 739 199 82 41 chr18 11428774 11428970 -75248578 + MER3 DNA MER1_type 6 209 0 374 313 15 15 chr18 11429357 11429491 -75248057 + MIR3 SINE MIR 23 156 -52 3843 225 58 5 chr18 11430081 11431017 -75246531 + L1PBa LINE L1 62 1046 -5817 3379 167 32 5 chr18 11431020 11431709 -75245839 + L1PBa LINE L1 1093 1942 -4921 264 300 12 0 chr18 11431809 11431889 -75245659 - MIR SINE MIR -84 124 44 2490 60 3 3 chr18 11433547 11433848 -75243700 - AluY SINE Alu -10 301 1 590 224 16 0 chr18 11434416 11434541 -75243007 - MLT1B LTR MaLR -263 127 1 429 259 84 7 chr18 11435259 11435402 -75242146 - MIR3 SINE MIR -24 184 31 389 277 42 47 chr18 11435799 11436012 -75241536 + MIR SINE MIR 40 251 -11 421 119 0 0 chr18 11436156 11436215 -75241333 - L1P4 LINE L1 -453 5712 5654 2027 316 37 31 chr18 11436216 11437019 -75240529 + ERVL LTR ERVL 2944 3751 -2013 346 395 14 25 chr18 11437026 11437312 -75240236 + L3 LINE CR1 987 1269 -308 260 236 7 118 chr18 11437364 11437508 -75240040 + MIR SINE MIR 85 212 -50 299 161 0 16 chr18 11437783 11437845 -75239703 + GA-rich Low_complexity Low_complexity 4 64 0 207 357 32 19 chr18 11439125 11439279 -75238269 - MIR SINE MIR -38 224 69 468 0 0 0 chr18 11440480 11440532 -75237016 + (TG)n Simple_repeat Simple_repeat 2 53 0 593 197 150 16 chr18 11440852 11441045 -75236503 + L1MB8 LINE L1 4947 5165 -981 452 94 16 0 chr18 11441049 11441113 -75236435 + AluJo SINE Alu 72 136 -176 1846 153 37 27 chr18 11441113 11441546 -75236002 + L1MB8 LINE L1 5159 5592 -586 3763 120 68 25 chr18 11441546 11442179 -75235369 - MER51A LTR ERV1 0 634 8 1072 197 45 72 chr18 11442183 11442391 -75235157 + L1MB8 LINE L1 5602 5799 -379 2525 91 0 0 chr18 11442391 11442700 -75234848 + AluSx SINE Alu 1 309 -3 1072 197 45 72 chr18 11442700 11442826 -75234722 + L1MB8 LINE L1 5799 5927 -251 2262 184 16 16 chr18 11443343 11443788 -75233760 - MER65A LTR ERV1 0 445 1 5276 209 70 44 chr18 11443789 11443851 -75233697 - MER65A-int LTR ERV1 -1 4870 4811 697 203 0 8 chr18 11443851 11443979 -75233569 - FLAM_A SINE Alu -5 128 2 5276 209 70 44 chr18 11443979 11444564 -75232984 - MER65A-int LTR ERV1 -60 4811 4243 2082 126 7 0 chr18 11444564 11444858 -75232690 - AluSq SINE Alu -17 296 1 5276 209 70 44 chr18 11444858 11445445 -75232103 - MER65A-int LTR ERV1 -628 4243 3603 1727 178 62 16 chr18 11445454 11445998 -75231550 - MER65A-int LTR ERV1 -846 5393 2945 1510 198 89 102 chr18 11445990 11446362 -75231186 - MER65A-int LTR ERV1 -2648 3950 3575 * 2162 102 30 3 chr18 11446362 11446657 -75230891 + AluSx SINE Alu 1 303 -9 1510 198 89 102 chr18 11446657 11446886 -75230662 - MER65A-int LTR ERV1 -3023 3575 3345 1891 181 3 0 chr18 11446886 11447195 -75230353 + AluSx SINE Alu 1 310 -2 1510 198 89 102 chr18 11447195 11447804 -75229744 - MER65A-int LTR ERV1 -3253 3345 1554 8999 203 79 41 chr18 11447912 11449732 -75227816 - MER65A-int LTR ERV1 -2377 2494 570 608 234 0 0 chr18 11449732 11449860 -75227688 + FLAM_A SINE Alu 1 128 -5 8999 203 79 41 chr18 11449860 11450442 -75227106 - MER65A-int LTR ERV1 -4301 570 11 2650 140 9 20 chr18 11450447 11450897 -75226651 - MER65A LTR ERV1 0 445 1 432 133 29 86 chr18 11451013 11451118 -75226430 - MIR SINE MIR -98 164 66 501 156 7 20 chr18 11451180 11451279 -75226269 + L1MB1 LINE L1 6075 6171 -30 208 175 25 0 chr18 11451280 11451320 -75226228 + A-rich Low_complexity Low_complexity 1 41 0 423 177 25 0 chr18 11451321 11451400 -75226148 + L1MA10 LINE L1 6169 6249 -85 2206 118 10 0 chr18 11451719 11452025 -75225523 - AluSx SINE Alu -1 311 3 299 301 112 28 chr18 11452319 11452462 -75225086 - MER5B DNA MER1_type -10 168 14 229 185 37 74 chr18 11453320 11453401 -75224147 + L1ME3A LINE L1 5523 5600 -570 2241 126 0 0 chr18 11453437 11453739 -75223809 - AluSx SINE Alu -10 302 1 1269 211 163 27 chr18 11453777 11454202 -75223346 + L1ME3A LINE L1 5694 6166 -4 277 280 34 25 chr18 11454466 11454584 -75222964 - LTR40a LTR ERVL -163 356 238 23 0 0 0 chr18 11454685 11454708 -75222840 + AT_rich Low_complexity Low_complexity 1 23 0 2222 117 0 3 chr18 11454709 11455016 -75222532 + AluSx SINE Alu 1 306 -6 1725 187 7 10 chr18 11455853 11456163 -75221385 - AluJo SINE Alu -3 309 1 689 234 132 0 chr18 11456328 11456495 -75221053 + MER5A DNA MER1_type 1 189 0 2229 105 3 13 chr18 11457043 11457358 -75220190 + AluSx SINE Alu 1 312 0 1808 188 0 3 chr18 11457370 11457678 -75219870 - AluJo SINE Alu -2 310 4 1234 176 29 0 chr18 11458061 11458266 -75219282 + AluJo SINE Alu 1 211 -101 228 217 145 72 chr18 11460231 11460314 -75217234 + L2 LINE L2 3184 3272 -41 283 309 34 81 chr18 11460513 11460662 -75216886 - MIR SINE MIR -58 204 63 1626 186 0 3 chr18 11461288 11461595 -75215953 - AluJo SINE Alu -1 311 6 2310 93 0 0 chr18 11461934 11462246 -75215302 - AluSx SINE Alu 0 312 1 216 97 0 0 chr18 11462556 11462587 -75214961 + (T)n Simple_repeat Simple_repeat 1 31 0 258 143 0 0 chr18 11462936 11462985 -75214563 + (T)n Simple_repeat Simple_repeat 1 49 0 7981 17 0 0 chr18 11462989 11463942 -75213606 - L1PA2 LINE L1 0 6155 5203 950 163 0 19 chr18 11465893 11466053 -75211495 + FRAM SINE Alu 1 153 -23 286 289 139 37 chr18 11466271 11466458 -75211090 + MIR SINE MIR 20 225 -37 2277 132 28 8 chr18 11466520 11466877 -75210671 - THE1B LTR MaLR 0 364 1 2407 69 0 0 chr18 11466893 11467196 -75210352 - AluY SINE Alu -8 303 1 207 69 0 0 chr18 11467588 11467617 -75209931 + (CATATA)n Simple_repeat Simple_repeat 2 30 0 207 114 0 0 chr18 11468656 11468691 -75208857 + (T)n Simple_repeat Simple_repeat 1 35 0 540 292 191 21 chr18 11469184 11469513 -75208035 - L2 LINE L2 -4 3309 2925 379 230 60 0 chr18 11469597 11469697 -75207851 - L2 LINE L2 -559 2755 2650 1558 172 0 24 chr18 11471660 11471950 -75205598 - AluJo SINE Alu -9 303 21 546 146 0 31 chr18 11472133 11472229 -75205319 - HY4 scRNA scRNA 0 93 1 391 200 20 160 chr18 11472701 11472901 -75204647 + MER58C DNA MER1_type 44 215 0 403 222 67 134 chr18 11473615 11474003 -75203545 + L2 LINE L2 2923 3284 -29 323 222 0 69 chr18 11474321 11474393 -75203155 - Tigger2a DNA MER2_type 0 444 378 725 165 0 0 chr18 11474395 11474510 -75203038 + FLAM_A SINE Alu 21 135 -7 2433 106 19 14 chr18 11474517 11474885 -75202663 - Tigger2a DNA MER2_type -64 370 1 22 0 0 0 chr18 11474891 11474913 -75202635 + AT_rich Low_complexity Low_complexity 1 22 0 268 305 100 24 chr18 11475667 11475877 -75201671 + L2 LINE L2 2258 2483 -831 1677 160 55 0 chr18 11475937 11476249 -75201299 + L1MB5 LINE L1 5829 6157 -17 2089 99 0 3 chr18 11476249 11476531 -75201017 + AluSq SINE Alu 26 306 -7 225 284 63 63 chr18 11477538 11477665 -75199883 + MER112 DNA MER1_type 29 155 -105 996 56 0 0 chr18 11477959 11478084 -75199464 + AluSp/q SINE Alu 179 303 -10 1737 146 24 3 chr18 11478096 11478383 -75199165 + AluSx SINE Alu 7 299 -13 711 56 0 0 chr18 11478823 11478912 -75198636 - AluSg/x SINE Alu -13 296 208 25 0 0 0 chr18 11479545 11479570 -75197978 + AT_rich Low_complexity Low_complexity 1 25 0 2344 91 0 0 chr18 11479831 11480138 -75197410 - AluSx SINE Alu -5 307 1 502 239 113 7 chr18 11480277 11480419 -75197129 + MER5A DNA MER1_type 33 189 0 2811 180 71 7 chr18 11480502 11481079 -75196469 - LTR26E LTR ERV1 0 622 9 2111 93 7 23 chr18 11481979 11482281 -75195267 + AluSx SINE Alu 1 297 -15 216 288 0 15 chr18 11482739 11482805 -75194743 - MIR SINE MIR -132 130 66 359 284 66 95 chr18 11482806 11483017 -75194531 - MIR SINE MIR -26 236 32 2129 105 7 0 chr18 11483522 11483816 -75193732 - AluSx SINE Alu -16 296 1 21 0 0 0 chr18 11484612 11484633 -75192915 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr18 11485433 11485454 -75192094 + (CA)n Simple_repeat Simple_repeat 1 21 0 383 333 8 16 chr18 11486419 11486545 -75191003 + MIR SINE MIR 38 162 -100 684 246 152 13 chr18 11486834 11487058 -75190490 - MIR SINE MIR 0 262 8 2072 104 13 3 chr18 11487206 11487504 -75190044 + AluSq SINE Alu 1 301 -12 1806 241 15 35 chr18 11487505 11488233 -75189315 + MER45B DNA AcHobo 56 819 -221 885 186 36 21 chr18 11488229 11488422 -75189126 - MER90 LTR ERV1 -416 198 3 * 335 326 31 8 chr18 11488429 11488558 -75188990 + L2 LINE L2 3182 3313 0 312 238 109 20 chr18 11488683 11488784 -75188764 - MER94 DNA DNA -24 110 1 1613 169 0 49 chr18 11488901 11489208 -75188340 - AluJo SINE Alu -18 294 3 1697 156 68 10 chr18 11489335 11489643 -75187905 + Tigger1 DNA MER2_type 1 326 -2092 3801 175 59 3 chr18 11489773 11490506 -75187042 + MER21B LTR ERV1 1 811 -52 2324 153 44 7 chr18 11490657 11491068 -75186480 + MSTB LTR MaLR 1 426 0 375 57 19 0 chr18 11491111 11491164 -75186384 - MADE1 DNA Mariner 0 80 27 2032 103 0 7 chr18 11491169 11491459 -75186089 + AluSq SINE Alu 5 292 -21 315 346 29 29 chr18 11491514 11491650 -75185898 - MIR3 SINE MIR -23 185 50 1606 173 102 27 chr18 11491930 11492301 -75185247 - LOR1b LTR ERV1 0 461 63 241 179 122 0 chr18 11492924 11493047 -75184501 + Zaphod DNA AcHobo 697 834 -3197 4618 152 72 17 chr18 11493056 11493540 -75184008 - L1MB7 LINE L1 -9 6175 5719 2093 94 0 0 chr18 11493540 11493837 -75183711 - AluY SINE Alu -14 297 1 4618 152 72 17 chr18 11493837 11494226 -75183322 - L1MB7 LINE L1 -465 5719 5254 876 246 88 51 chr18 11494226 11494578 -75182970 - MER20B DNA MER1_type -49 734 360 1920 134 23 3 chr18 11494578 11494883 -75182665 - AluSx SINE Alu -1 311 1 876 246 88 51 chr18 11494883 11494982 -75182566 - MER20B DNA MER1_type -423 360 266 704 244 52 81 chr18 11495112 11495244 -75182304 - MER20B DNA MER1_type -484 299 165 1874 149 3 3 chr18 11495244 11495545 -75182003 - AluSx SINE Alu -11 301 1 704 244 52 81 chr18 11495545 11495720 -75181828 - MER20B DNA MER1_type -618 165 1 815 174 7 19 chr18 11495999 11496154 -75181394 + FRAM SINE Alu 18 170 -6 1625 174 0 3 chr18 11496249 11496536 -75181012 + AluSx SINE Alu 1 286 -26 324 295 74 16 chr18 11496567 11496689 -75180859 + MER5A DNA MER1_type 60 188 -1 298 346 10 10 chr18 11497806 11497910 -75179638 - MIR SINE MIR -158 104 1 368 282 124 22 chr18 11498066 11498410 -75179138 - LTR33A LTR ERVL -113 410 9 369 198 0 0 chr18 11498560 11498641 -75178907 + CT-rich Low_complexity Low_complexity 1 81 0 1703 141 3 40 chr18 11498643 11498941 -75178607 - AluJb SINE Alu -23 289 3 213 121 0 0 chr18 11498946 11498979 -75178569 + (T)n Simple_repeat Simple_repeat 1 33 0 827 158 0 8 chr18 11499069 11499202 -75178346 + FLAM_A SINE Alu 1 132 -1 183 148 0 0 chr18 11499979 11500006 -75177542 + MIR SINE MIR 14 40 -222 208 225 99 14 chr18 11500613 11500684 -75176864 - MIR SINE MIR -125 137 61 290 305 56 13 chr18 11500701 11500931 -75176617 + MIR SINE MIR 13 256 -6 207 0 0 0 chr18 11501397 11501420 -75176128 + (GA)n Simple_repeat Simple_repeat 1 23 0 482 187 0 11 chr18 11501534 11501625 -75175923 - MLT1A2 LTR MaLR -284 90 1 286 178 89 33 chr18 11501625 11501715 -75175833 - L2 LINE L2 -652 2662 2568 4743 151 21 8 chr18 11501726 11502547 -75175001 - L1PB4 LINE L1 0 6156 5326 409 349 56 24 chr18 11502553 11502802 -75174746 - L1MEc LINE L1 -3987 2409 2153 234 128 0 0 chr18 11502802 11502841 -75174707 + (TCCC)n Simple_repeat Simple_repeat 3 41 0 273 274 59 20 chr18 11503303 11503405 -75174143 - HAL1b LINE L1 -871 477 372 2308 87 0 3 chr18 11503651 11503962 -75173586 - AluSx SINE Alu -2 310 1 1318 131 39 74 chr18 11503984 11504267 -75173281 - AluJb SINE Alu -24 288 16 1180 218 8 8 chr18 11504340 11504592 -75172956 - AluJo SINE Alu -22 290 39 1823 226 40 2 chr18 11504610 11505040 -75172508 - L1M4 LINE L1 -904 5242 4797 2330 67 0 3 chr18 11505843 11506141 -75171407 + AluY SINE Alu 1 297 -14 205 150 0 0 chr18 11506147 11506172 -75171376 + (TAA)n Simple_repeat Simple_repeat 2 29 -12 2177 105 0 0 chr18 11506172 11506466 -75171082 + AluSq SINE Alu 1 294 -19 205 150 0 0 chr18 11506466 11506480 -75171068 + (TAA)n Simple_repeat Simple_repeat 28 41 0 2131 117 0 0 chr18 11506596 11506887 -75170661 - AluSx SINE Alu -21 291 1 1678 125 60 29 chr18 11506989 11507146 -75170402 - AluJb SINE Alu -22 290 119 180 0 0 0 chr18 11507146 11507166 -75170382 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1678 125 60 29 chr18 11507166 11507289 -75170259 - AluJb SINE Alu -193 119 1 1980 114 14 0 chr18 11508280 11508583 -75168965 - AluSx SINE Alu 0 307 1 640 226 82 7 chr18 11508969 11509115 -75168433 - MER20 DNA MER1_type 0 219 63 614 194 37 8 chr18 11509621 11509755 -75167793 + MER5B DNA MER1_type 14 151 -27 231 250 29 15 chr18 11510665 11510733 -75166815 - MIR SINE MIR -135 127 59 723 158 116 7 chr18 11510996 11511156 -75166392 - MER104 DNA Tc2 -1 179 1 2018 136 77 3 chr18 11511163 11511502 -75166046 - MER47A DNA MER2_type -1 365 2 2413 49 0 10 chr18 11511513 11511817 -75165731 - AluY SINE Alu -10 301 1 1652 170 0 22 chr18 11513831 11514143 -75163405 + AluJo SINE Alu 1 305 -7 2214 71 0 3 chr18 11514593 11514906 -75162642 - AluSc SINE Alu 0 312 1 208 231 77 77 chr18 11515260 11515338 -75162210 - MIR SINE MIR -87 175 98 2130 111 0 0 chr18 11515370 11515658 -75161890 - AluSx SINE Alu -24 288 1 200 303 64 37 chr18 11515700 11515809 -75161739 + L2 LINE L2 3194 3305 -8 218 114 0 45 chr18 11517149 11517193 -75160355 + (TCTCCC)n Simple_repeat Simple_repeat 5 46 0 2577 93 35 11 chr18 11517193 11517559 -75159989 - THE1C LTR MaLR 0 375 1 2010 206 60 19 chr18 11518283 11518768 -75158780 - MLT1D LTR MaLR 0 505 1 232 260 78 13 chr18 11518778 11518855 -75158693 - MIR3 SINE MIR -15 193 112 442 256 15 64 chr18 11518894 11519038 -75158510 - MIR SINE MIR -68 140 58 202 229 0 0 chr18 11519447 11519495 -75158053 + T-rich Low_complexity Low_complexity 1 48 0 25 95 0 0 chr18 11519996 11520070 -75157478 + AT_rich Low_complexity Low_complexity 1 74 0 681 321 17 28 chr18 11520223 11520584 -75156964 - L1ME3A LINE L1 -219 5951 5595 3862 156 26 12 chr18 11520594 11521285 -75156263 - L1MB3 LINE L1 -2 6181 5481 451 264 16 60 chr18 11522055 11522237 -75155311 - MLT1C LTR MaLR -8 459 286 * 876 212 135 74 chr18 11522234 11522597 -75154951 - MLT1C LTR MaLR -82 385 1 1219 176 12 25 chr18 11523180 11523424 -75154124 + AluJo SINE Alu 46 286 -26 302 240 147 0 chr18 11523427 11523502 -75154046 - L1MC4 LINE L1 -1339 6703 6618 251 345 42 0 chr18 11524658 11524777 -75152771 + MIR SINE MIR 73 196 -66 2055 125 3 10 chr18 11524906 11525219 -75152329 - AluSx SINE Alu -1 311 1 981 171 64 0 chr18 11528225 11528412 -75149136 - LTR40b LTR ERVL -24 438 240 1110 220 13 17 chr18 11528494 11528726 -75148822 - LTR40c LTR ERVL -231 234 4 1840 145 0 0 chr18 11528939 11529243 -75148305 - AluSx SINE Alu 0 304 1 213 277 84 12 chr18 11530131 11530214 -75147334 - MIR SINE MIR -78 130 42 1710 171 10 0 chr18 11530829 11531121 -75146427 + AluJo SINE Alu 1 295 -17 234 150 0 0 chr18 11531274 11531314 -75146234 + (TG)n Simple_repeat Simple_repeat 2 41 0 352 262 71 0 chr18 11531314 11531398 -75146150 + L1MC4 LINE L1 6614 6703 -1339 347 337 0 0 chr18 11531323 11531412 -75146136 - L1MC4 LINE L1 -1340 6702 6614 * 301 211 56 14 chr18 11531384 11531455 -75146093 + L1MCa LINE L1 1995 2068 -4358 * 388 304 0 0 chr18 11531445 11531537 -75146011 + L1MC4 LINE L1 6615 6706 -1336 352 308 19 10 chr18 11531447 11531551 -75145997 - L1MC4 LINE L1 -1340 6702 6598 * 2334 70 7 7 chr18 11532989 11533291 -75144257 - AluSp SINE Alu -11 302 1 313 228 164 0 chr18 11535205 11535334 -75142214 + MIR SINE MIR 29 185 -63 293 244 12 12 chr18 11535567 11535653 -75141895 + CT-rich Low_complexity Low_complexity 1 86 0 183 129 0 0 chr18 11535664 11535695 -75141853 + (TG)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr18 11535946 11535968 -75141580 + AT_rich Low_complexity Low_complexity 1 22 0 2413 164 40 24 chr18 11536291 11536541 -75141007 - L1MB4 LINE L1 -1 6179 5934 2365 105 73 15 chr18 11536541 11536884 -75140664 - THE1B LTR MaLR 0 364 2 2413 164 40 24 chr18 11536884 11537139 -75140409 - L1MB4 LINE L1 -246 5934 5666 229 196 10 176 chr18 11539233 11539289 -75138259 - MIR SINE MIR -65 197 164 2190 94 3 3 chr18 11539289 11539586 -75137962 - AluSq SINE Alu -16 297 1 229 196 10 176 chr18 11539586 11539631 -75137917 - MIR SINE MIR -98 164 113 255 288 116 7 chr18 11542714 11543006 -75134542 - L1ME4a LINE L1 -5 6116 5793 350 279 58 91 chr18 11543057 11543265 -75134283 - L1MC4 LINE L1 -1 8041 7841 300 115 39 0 chr18 11543323 11543375 -75134173 - L1ME2 LINE L1 -33 6131 6078 2289 82 3 13 chr18 11543748 11544063 -75133485 - AluSx SINE Alu 0 312 1 366 282 33 72 chr18 11545166 11545279 -75132269 + MIR SINE MIR 87 192 -70 1569 209 64 22 chr18 11545279 11545638 -75131910 - MLT1A2 LTR MaLR 0 374 1 366 282 33 72 chr18 11545638 11545705 -75131843 + MIR SINE MIR 192 260 -2 26 30 0 0 chr18 11546104 11546137 -75131411 + AT_rich Low_complexity Low_complexity 1 33 0 759 157 0 0 chr18 11546139 11546254 -75131294 - FLAM_C SINE Alu -15 118 4 364 236 82 44 chr18 11547390 11547572 -75129976 - L1ME4a LINE L1 0 6121 5933 21 0 0 0 chr18 11547657 11547678 -75129870 + AT_rich Low_complexity Low_complexity 1 21 0 324 224 61 10 chr18 11547683 11547781 -75129767 - L1ME4a LINE L1 -201 5920 5818 768 206 0 117 chr18 11547784 11548031 -75129517 + L1MA9 LINE L1 6057 6274 -38 239 266 63 38 chr18 11548088 11548167 -75129381 - L1ME4a LINE L1 -415 5706 5626 782 315 107 42 chr18 11548340 11548892 -75128656 - L1ME4a LINE L1 -810 5336 4749 631 221 97 26 chr18 11548956 11549151 -75128397 - MER58A DNA MER1_type -15 209 1 189 0 0 0 chr18 11549224 11549245 -75128303 + (TG)n Simple_repeat Simple_repeat 2 22 0 344 70 28 28 chr18 11549413 11549484 -75128064 + (TTTC)n Simple_repeat Simple_repeat 4 74 0 1877 129 0 0 chr18 11549485 11549757 -75127791 - AluSx SINE Alu -40 272 1 1996 95 0 7 chr18 11550258 11550565 -75126983 + AluSx SINE Alu 1 305 0 216 0 0 0 chr18 11551692 11551716 -75125832 + (TTTA)n Simple_repeat Simple_repeat 4 27 0 1436 153 3 96 chr18 11551725 11551906 -75125642 - AluJo SINE Alu -28 284 143 2168 100 0 16 chr18 11551906 11552216 -75125332 + AluY SINE Alu 1 305 -6 1436 153 3 96 chr18 11552216 11552347 -75125201 - AluJo SINE Alu -169 143 1 263 174 0 0 chr18 11555792 11555838 -75121710 + L2 LINE L2 3268 3313 0 1929 120 3 46 chr18 11555844 11556169 -75121379 + AluSx SINE Alu 1 311 -1 305 304 93 37 chr18 11556637 11556798 -75120750 - MIR SINE MIR -65 197 28 251 274 0 0 chr18 11559975 11560048 -75117500 + T-rich Low_complexity Low_complexity 2 74 0 363 231 39 31 chr18 11562260 11562390 -75115158 - MIR3 SINE MIR -25 183 53 23 0 0 0 chr18 11562764 11562787 -75114761 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr18 11565216 11565242 -75112306 + AT_rich Low_complexity Low_complexity 1 26 0 327 224 71 0 chr18 11565486 11565584 -75111964 + L2 LINE L2 3193 3297 -16 383 292 43 69 chr18 11565589 11565697 -75111851 + L1MEd LINE L1 69 178 -5941 2344 106 0 0 chr18 11565697 11566000 -75111548 + AluSx SINE Alu 1 303 -9 383 292 43 69 chr18 11566000 11566124 -75111424 + L1MEd LINE L1 178 295 -5824 447 258 187 47 chr18 11566260 11566667 -75110881 + L1MEd LINE L1 485 948 -5171 2278 118 27 3 chr18 11569605 11569943 -75107605 + LTR24B LTR ERV1 1 346 -230 355 164 14 0 chr18 11571848 11571921 -75105627 - L1PB4 LINE L1 0 6156 6083 21 0 0 0 chr18 11576284 11576305 -75101243 + AT_rich Low_complexity Low_complexity 1 21 0 195 129 0 0 chr18 11578132 11578163 -75099385 + (A)n Simple_repeat Simple_repeat 1 31 0 349 295 83 9 chr18 11578214 11578431 -75099117 + MIR SINE MIR 29 261 -1 1156 138 28 11 chr18 11579224 11579405 -75098143 - AluJo SINE Alu -10 302 119 2002 131 28 0 chr18 11579683 11579974 -75097574 + AluJb SINE Alu 1 299 -13 207 0 0 0 chr18 11580071 11580094 -75097454 + (TA)n Simple_repeat Simple_repeat 2 24 0 2298 124 20 0 chr18 11580094 11580441 -75097107 - L1PA16 LINE L1 -20 6146 5793 319 292 62 9 chr18 11582495 11582608 -75094940 - MIR3 SINE MIR -54 154 36 218 322 111 41 chr18 11583883 11584054 -75093494 - L2 LINE L2 -194 3078 2896 504 268 16 95 chr18 11584195 11584438 -75093110 + Charlie4 DNA MER1_type 10 233 -1728 253 215 46 15 chr18 11584444 11584509 -75093039 + Charlie4 DNA MER1_type 1891 1957 -4 351 324 42 38 chr18 11584949 11585187 -75092361 - L2 LINE L2 -1227 2087 1849 2404 145 46 5 chr18 11586016 11586431 -75091117 - MSTB1 LTR MaLR 0 432 1 189 74 0 0 chr18 11586488 11586515 -75091033 + (TA)n Simple_repeat Simple_repeat 2 28 0 243 350 28 21 chr18 11586633 11586776 -75090772 + MIR SINE MIR 69 212 -50 1369 258 90 43 chr18 11586870 11587559 -75089989 - L1MEc LINE L1 -4310 2086 1366 467 98 24 12 chr18 11589249 11589331 -75088217 + AluJ/FRAM SINE Alu 220 302 -10 5745 31 6 0 chr18 11589931 11590600 -75086948 + L1PA3 LINE L1 5483 6155 0 189 0 0 0 chr18 11592221 11592242 -75085306 + (T)n Simple_repeat Simple_repeat 1 21 0 249 328 23 8 chr18 11593126 11593257 -75084291 - MIR SINE MIR -118 144 12 332 338 56 0 chr18 11593426 11593586 -75083962 + MARNA DNA Mariner 269 437 -149 1746 167 3 28 chr18 11594562 11594879 -75082669 - AluJb SINE Alu -3 309 1 2519 51 3 3 chr18 11595096 11595388 -75082160 + AluY SINE Alu 1 292 -19 469 307 101 21 chr18 11597199 11597246 -75080302 + MIR SINE MIR 4 46 -216 267 31 0 0 chr18 11597246 11597278 -75080270 + (TTGG)n Simple_repeat Simple_repeat 2 33 0 2102 114 14 0 chr18 11597278 11597559 -75079989 - AluSx SINE Alu -27 285 1 469 307 101 21 chr18 11597559 11597748 -75079800 + MIR SINE MIR 45 260 -2 865 110 0 0 chr18 11597889 11598007 -75079541 + AluSg/x SINE Alu 178 295 -15 794 277 131 46 chr18 11598039 11598550 -75078998 + MLT1H1 LTR MaLR 6 555 0 1421 184 23 53 chr18 11598966 11599270 -75078278 + AluJo SINE Alu 1 295 -17 1850 157 3 20 chr18 11600005 11600331 -75077217 + AluJo SINE Alu 1 312 0 312 342 68 5 chr18 11600665 11600855 -75076693 + MIR SINE MIR 44 245 -17 287 306 90 0 chr18 11600944 11601055 -75076493 + L2 LINE L2 3148 3268 -4 421 340 91 10 chr18 11601467 11601676 -75075872 - MIR SINE MIR -3 259 34 2079 152 42 17 chr18 11601679 11602035 -75075513 + MER34B LTR ERV1 1 365 -200 1222 109 0 0 chr18 11602035 11602210 -75075338 + MER41-int LTR ERV1 3515 3689 -2257 17310 172 39 4 chr18 11602211 11607526 -75070022 + L1PBa LINE L1 46 5547 -1315 1301 156 17 35 chr18 11607743 11607974 -75069574 + AluJo SINE Alu 86 312 0 359 238 35 46 chr18 11608149 11608291 -75069257 + MER77 LTR ERV1 23 207 -398 * 972 242 44 133 chr18 11608259 11608846 -75068702 + MER21B LTR ERV1 102 636 -227 1212 264 75 52 chr18 11608951 11609100 -75068448 + L1MC4a LINE L1 5121 5265 -881 1772 163 0 11 chr18 11609100 11609382 -75068166 + AluJb SINE Alu 32 310 -2 1212 264 75 52 chr18 11609382 11609684 -75067864 + L1MC4a LINE L1 5265 5057 -1089 2020 119 3 53 chr18 11609684 11610003 -75067545 + AluSx SINE Alu 1 303 -9 1212 264 75 52 chr18 11610003 11610360 -75067188 + L1MC4a LINE L1 5056 5403 -743 2136 158 60 3 chr18 11610369 11610736 -75066812 - MLT1B LTR MaLR -2 388 1 22 35 0 0 chr18 11610920 11610949 -75066599 + AT_rich Low_complexity Low_complexity 1 29 0 2333 116 135 5 chr18 11612289 11612668 -75064880 + MSTA LTR MaLR 1 428 0 1470 181 10 17 chr18 11612862 11613160 -75064388 + AluSc SINE Alu 1 296 -13 21 36 0 0 chr18 11613246 11613274 -75064274 + AT_rich Low_complexity Low_complexity 1 28 0 2279 127 20 0 chr18 11613276 11613623 -75063925 - L1PA16 LINE L1 -20 6146 5793 197 403 14 0 chr18 11614199 11614271 -75063277 - L2 LINE L2 -5 3267 3195 366 292 62 9 chr18 11615677 11615790 -75061758 - MIR3 SINE MIR -54 154 36 22 0 0 0 chr18 11616739 11616761 -75060787 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr18 11616820 11616852 -75060696 + AT_rich Low_complexity Low_complexity 1 32 0 250 286 84 121 chr18 11617598 11617944 -75059604 - L2 LINE L2 -41 3231 2899 457 259 14 63 chr18 11618073 11618216 -75059332 + Charlie4 DNA MER1_type 10 145 -1816 258 215 46 15 chr18 11618324 11618389 -75059159 + Charlie4 DNA MER1_type 1891 1957 -4 435 324 42 38 chr18 11618829 11619067 -75058481 - L2 LINE L2 -1227 2087 1849 2421 145 46 5 chr18 11619895 11620310 -75057238 - MSTB1 LTR MaLR 0 432 1 189 74 0 0 chr18 11620367 11620394 -75057154 + (TA)n Simple_repeat Simple_repeat 1 27 0 307 350 28 21 chr18 11620512 11620655 -75056893 + MIR SINE MIR 69 212 -50 1327 258 93 44 chr18 11620749 11621436 -75056112 - L1MEc LINE L1 -4310 2086 1366 184 248 37 83 chr18 11621438 11621547 -75056001 - L2 LINE L2 -13 3300 3197 196 229 0 71 chr18 11621547 11621617 -75055931 - L2 LINE L2 -697 2617 2553 472 98 24 12 chr18 11623126 11623208 -75054340 + AluJ/FRAM SINE Alu 220 302 -10 5753 30 6 0 chr18 11623808 11624477 -75053071 + L1PA3 LINE L1 5483 6155 0 189 0 0 0 chr18 11626098 11626119 -75051429 + (T)n Simple_repeat Simple_repeat 1 21 0 305 328 23 8 chr18 11627003 11627134 -75050414 - MIR SINE MIR -118 144 12 334 325 58 26 chr18 11627272 11627463 -75050085 + MARNA DNA Mariner 241 437 -149 1636 170 3 28 chr18 11628439 11628756 -75048792 - AluJb SINE Alu -3 309 1 2383 51 3 3 chr18 11628973 11629265 -75048283 + AluY SINE Alu 1 292 -19 566 303 101 21 chr18 11631076 11631123 -75046425 + MIR SINE MIR 4 46 -216 267 31 0 0 chr18 11631123 11631155 -75046393 + (TTGG)n Simple_repeat Simple_repeat 2 33 0 1977 114 14 0 chr18 11631155 11631436 -75046112 - AluSx SINE Alu -27 285 1 566 303 101 21 chr18 11631436 11631625 -75045923 + MIR SINE MIR 45 260 -2 830 96 0 0 chr18 11631766 11631881 -75045667 + AluSg/x SINE Alu 178 292 -18 198 0 0 0 chr18 11631881 11631903 -75045645 + (TAGA)n Simple_repeat Simple_repeat 2 23 0 428 133 0 0 chr18 11633238 11633298 -75044250 - AluJ/FLAM SINE Alu -240 72 13 208 143 0 0 chr18 11635833 11635868 -75041680 + (ATGGTG)n Simple_repeat Simple_repeat 4 38 0 251 125 0 25 chr18 11636257 11636297 -75041251 + MER116 DNA Mariner 42 80 0 288 279 107 118 chr18 11638223 11638570 -75038978 + MARNA DNA Mariner 12 354 -232 22 56 0 0 chr18 11640931 11640967 -75036581 + AT_rich Low_complexity Low_complexity 1 36 0 3906 152 36 6 chr18 11642197 11642888 -75034660 + L1MB3 LINE L1 5469 6180 -3 2316 56 0 26 chr18 11642889 11643192 -75034356 - AluY SINE Alu -16 295 1 2185 97 3 0 chr18 11643199 11643489 -75034059 - AluSp SINE Alu -22 291 1 545 288 123 29 chr18 11643694 11643937 -75033611 - MLT1K LTR MaLR -137 451 186 906 173 129 10 chr18 11644954 11645156 -75032392 - L1MA9 LINE L1 -37 6275 6050 1995 140 56 65 chr18 11645240 11645536 -75032012 - L1MB5 LINE L1 -2 6172 5875 2140 99 3 3 chr18 11645536 11645840 -75031708 - AluSg SINE Alu -6 304 1 1995 140 56 65 chr18 11645840 11645875 -75031673 - L1MB5 LINE L1 -299 5875 5841 2944 181 20 49 chr18 11645875 11646528 -75031020 - LTR27 LTR ERV1 -2 634 1 1995 140 56 65 chr18 11646528 11646623 -75030925 - L1MB5 LINE L1 -333 5841 5749 426 240 217 58 chr18 11646659 11646917 -75030631 - AluJo SINE Alu -2 300 2 251 299 118 31 chr18 11647276 11647344 -75030204 + MIR SINE MIR 50 111 -151 2115 84 7 11 chr18 11647344 11647651 -75029897 - AluSq SINE Alu 0 306 1 251 299 118 31 chr18 11647651 11647708 -75029840 + MIR SINE MIR 111 187 -75 569 307 205 40 chr18 11647710 11648272 -75029276 - L2 LINE L2 -20 3252 2579 646 296 32 0 chr18 11649414 11649603 -75027945 + MIR SINE MIR 35 229 -33 823 259 161 20 chr18 11650275 11650630 -75026918 + MLT1I LTR MaLR 1 405 -4 206 172 94 16 chr18 11651028 11651092 -75026456 - MIR3 SINE MIR -8 200 132 432 240 156 19 chr18 11651159 11651313 -75026235 + MER5B DNA MER1_type 1 175 -3 637 196 34 62 chr18 11651338 11651399 -75026149 - MER5B DNA MER1_type -1 177 116 1596 175 45 3 chr18 11651399 11651685 -75025863 + AluJo SINE Alu 1 298 -14 637 196 34 62 chr18 11651685 11651802 -75025746 - MER5B DNA MER1_type -62 116 4 447 295 112 18 chr18 11651817 11652041 -75025507 + MIR SINE MIR 18 262 0 278 316 40 9 chr18 11652043 11652184 -75025364 - MIR SINE MIR -61 147 46 186 317 198 40 chr18 11654084 11654185 -75023363 + L2 LINE L2 3148 3264 -8 2567 119 33 42 chr18 11654244 11654664 -75022884 + L1MA8 LINE L1 5817 6234 -57 1836 140 7 29 chr18 11654664 11654972 -75022576 + AluJb SINE Alu 1 301 -11 2567 119 33 42 chr18 11654972 11655030 -75022518 + L1MA8 LINE L1 6234 6291 0 1851 152 13 10 chr18 11655037 11655347 -75022201 + AluJo SINE Alu 1 311 -1 23 0 0 0 chr18 11655354 11655377 -75022171 + AT_rich Low_complexity Low_complexity 1 23 0 414 275 135 54 chr18 11655877 11656140 -75021408 - MIR SINE MIR 0 262 3 281 269 174 20 chr18 11656274 11656423 -75021125 - L2 LINE L2 0 3313 3142 338 309 36 0 chr18 11656663 11656773 -75020775 - L2 LINE L2 -3 3310 3197 200 35 35 0 chr18 11657412 11657441 -75020107 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 180 362 96 23 chr18 11658212 11658389 -75019159 - L2 LINE L2 0 3272 3083 1813 239 27 14 chr18 11659303 11659717 -75017831 - MLT1J LTR MaLR -32 479 61 215 411 7 0 chr18 11659757 11659903 -75017645 - L2 LINE L2 -2465 849 703 22 0 0 0 chr18 11661001 11661023 -75016525 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 11661203 11661224 -75016324 + AT_rich Low_complexity Low_complexity 1 21 0 642 231 0 0 chr18 11661224 11661345 -75016203 + MER82 DNA MER2_type 1 121 -532 342 337 10 0 chr18 11661397 11661498 -75016050 - L1MC4a LINE L1 -1880 5928 5827 276 322 181 6 chr18 11661719 11661896 -75015652 + L2 LINE L2 2826 3033 -239 531 236 16 16 chr18 11661896 11662023 -75015525 + MER69 DNA AcHobo 1 127 -2399 266 155 28 84 chr18 11662037 11662073 -75015475 + MER69 DNA AcHobo 2457 2489 -37 2251 173 16 38 chr18 11662073 11662205 -75015343 - MER65A LTR ERV1 -2 443 310 2251 79 0 7 chr18 11662205 11662516 -75015032 - AluSx SINE Alu 0 312 1 2251 173 16 38 chr18 11662516 11662834 -75014714 - MER65A LTR ERV1 -135 310 3 266 155 28 84 chr18 11662834 11662868 -75014680 + MER69 DNA AcHobo 2489 2523 -3 241 274 153 16 chr18 11663492 11663616 -75013932 + L2 LINE L2 2928 3068 -204 2327 50 68 4 chr18 11664303 11664583 -75012965 + AluY SINE Alu 1 298 -13 276 276 78 17 chr18 11664708 11664824 -75012724 - L2 LINE L2 -5 3267 3145 204 354 24 24 chr18 11665031 11665195 -75012353 + L2 LINE L2 2914 3077 -195 220 154 58 39 chr18 11665305 11665357 -75012191 + L2 LINE L2 3218 3270 -2 1117 225 67 26 chr18 11665377 11665763 -75011785 + L1MCc LINE L1 50 451 -5972 576 306 49 10 chr18 11665971 11666275 -75011273 - L1MEc LINE L1 -6044 352 37 * 2884 222 78 51 chr18 11666271 11667549 -75009999 + L1ME2 LINE L1 4844 6154 -10 245 282 82 0 chr18 11667608 11667718 -75009830 + L1MC4 LINE L1 7924 8042 0 288 297 20 40 chr18 11667935 11668083 -75009465 - MIR SINE MIR -115 147 3 3320 148 19 9 chr18 11668169 11668709 -75008839 - MER7C DNA MER2_type 0 602 58 314 200 64 55 chr18 11668795 11668905 -75008643 + L2 LINE L2 3203 3313 0 255 316 61 0 chr18 11669759 11669873 -75007675 - MIR SINE MIR -78 184 64 358 294 170 0 chr18 11670964 11671117 -75006431 - MER5A DNA MER1_type 0 189 11 1547 108 0 5 chr18 11671229 11671442 -75006106 - AluSg/x SINE Alu -14 298 87 211 306 0 28 chr18 11671601 11671673 -75005875 + L2 LINE L2 2977 3046 -226 1084 192 58 58 chr18 11671943 11672235 -75005313 - L1ME2 LINE L1 -9 6155 5864 269 0 0 53 chr18 11672613 11672651 -75004897 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 1738 192 13 7 chr18 11673298 11673600 -75003948 - AluJo SINE Alu -8 304 1 305 281 162 0 chr18 11673670 11673838 -75003710 - MIR SINE MIR -69 193 3 1872 129 72 67 chr18 11674081 11674469 -75003079 - MLT1B LTR MaLR 0 390 1 296 286 129 14 chr18 11674868 11675015 -75002533 + MIR SINE MIR 17 180 -82 502 125 0 34 chr18 11676190 11676278 -75001270 + MLT1A2 LTR MaLR 290 374 0 1181 136 35 44 chr18 11676299 11676527 -75001021 + L1MB3 LINE L1 5951 6176 -7 474 221 0 0 chr18 11677544 11677650 -74999898 - MLT1E1 LTR MaLR -8 646 511 272 149 60 15 chr18 11677781 11677848 -74999700 - MLT1E1 LTR MaLR -95 498 429 1187 221 59 38 chr18 11680181 11680520 -74997028 + MLT1G1 LTR MaLR 72 417 -178 2354 161 41 38 chr18 11680522 11681029 -74996519 - L1M4 LINE L1 -460 5718 5201 1217 153 5 0 chr18 11681029 11681219 -74996329 - AluJo SINE Alu -3 309 119 3832 191 9 12 chr18 11681219 11682024 -74995524 - L1M4 LINE L1 -960 5186 4385 631 207 155 93 chr18 11682717 11682972 -74994576 - L1MC5 LINE L1 -22 7939 7646 195 69 0 0 chr18 11682972 11683001 -74994547 + (TG)n Simple_repeat Simple_repeat 2 30 0 631 207 155 93 chr18 11683001 11683165 -74994383 - L1MC5 LINE L1 -315 7646 7494 1686 186 184 60 chr18 11683527 11684076 -74993472 - MLT1E2 LTR MaLR -3 623 5 657 47 0 0 chr18 11684167 11684252 -74993296 + (TC)n Simple_repeat Simple_repeat 1 85 0 504 265 60 24 chr18 11684266 11684432 -74993116 - LTR16A LTR ERVL -99 351 180 1682 167 173 21 chr18 11685017 11685441 -74992107 + LTR10A LTR ERV1 13 547 -62 191 304 71 62 chr18 11685539 11685651 -74991897 + L2 LINE L2 3160 3272 0 1874 176 158 37 chr18 11685688 11686177 -74991371 - LTR10A LTR ERV1 -61 548 1 18098 103 8 14 chr18 11686178 11689075 -74988473 - Harlequin LTR ERV1 -2 6647 1827 355 229 169 0 chr18 11689103 11689186 -74988362 + LTR8 LTR ERV1 157 253 -438 5265 92 26 59 chr18 11689188 11690285 -74987263 - HERVI LTR ERV1 -5176 1720 703 4998 210 42 20 chr18 11690335 11691473 -74986075 - HERVI LTR ERV1 -5812 837 504 491 256 75 6 chr18 11691477 11691637 -74985911 - HERVI LTR ERV1 -6478 171 1 1908 203 101 33 chr18 11691646 11692159 -74985389 - LTR10A LTR ERV1 -61 548 1 1540 161 18 25 chr18 11692220 11692494 -74985054 - AluJo SINE Alu -4 308 37 2186 122 7 0 chr18 11692518 11692813 -74984735 + AluSp SINE Alu 1 297 -16 189 107 0 0 chr18 11692874 11692902 -74984646 + (TTA)n Simple_repeat Simple_repeat 3 30 0 37750 61 2 7 chr18 11692902 11698462 -74979086 - L1PA5 LINE L1 -18 6136 606 38 39 0 0 chr18 11699187 11699239 -74978309 + AT_rich Low_complexity Low_complexity 1 52 0 303 301 14 28 chr18 11699244 11699387 -74978161 + L1MC4a LINE L1 4787 4927 -1219 1301 156 17 35 chr18 11699404 11699635 -74977913 + AluJo SINE Alu 86 312 0 359 238 35 46 chr18 11699810 11699952 -74977596 + MER77 LTR ERV1 23 207 -398 * 972 242 44 133 chr18 11699920 11700507 -74977041 + MER21B LTR ERV1 102 636 -227 1212 253 88 56 chr18 11700612 11700761 -74976787 + L1MC4a LINE L1 5121 5264 -882 1772 163 0 11 chr18 11700761 11701043 -74976505 + AluJb SINE Alu 32 310 -2 1212 253 88 56 chr18 11701043 11701345 -74976203 + L1MC4a LINE L1 5264 5060 -1086 2020 119 3 53 chr18 11701345 11701664 -74975884 + AluSx SINE Alu 1 303 -9 1212 253 88 56 chr18 11701664 11702021 -74975527 + L1MC4a LINE L1 5059 5403 -743 2136 158 60 3 chr18 11702030 11702397 -74975151 - MLT1B LTR MaLR -2 388 1 22 35 0 0 chr18 11702581 11702610 -74974938 + AT_rich Low_complexity Low_complexity 1 29 0 2330 116 135 5 chr18 11703950 11704329 -74973219 + MSTA LTR MaLR 1 428 0 2260 109 0 0 chr18 11704523 11704817 -74972731 + AluSc SINE Alu 1 294 -15 794 277 131 46 chr18 11704849 11705360 -74972188 + MLT1H1 LTR MaLR 6 555 0 1421 184 23 53 chr18 11705776 11706080 -74971468 + AluJo SINE Alu 1 295 -17 1850 157 3 20 chr18 11706815 11707141 -74970407 + AluJo SINE Alu 1 312 0 312 342 68 5 chr18 11707475 11707665 -74969883 + MIR SINE MIR 44 245 -17 287 306 90 0 chr18 11707754 11707865 -74969683 + L2 LINE L2 3148 3268 -4 421 340 91 10 chr18 11708277 11708486 -74969062 - MIR SINE MIR -3 259 34 2079 152 42 17 chr18 11708489 11708845 -74968703 + MER34B LTR ERV1 1 365 -200 1222 109 0 0 chr18 11708845 11709020 -74968528 + MER41B-int LTR ERV1 3515 3689 -2257 17310 162 35 5 chr18 11709021 11714517 -74963031 + L1PB1 LINE L1 46 5372 -1495 2922 0 0 0 chr18 11714517 11714822 -74962726 + AluYa5 SINE Alu 1 305 -6 17310 162 35 5 chr18 11714822 11715205 -74962343 + L1PB1 LINE L1 5372 5742 -1125 2253 114 0 10 chr18 11715205 11715512 -74962036 + AluSx SINE Alu 1 304 -8 17310 162 35 5 chr18 11715512 11715931 -74961617 + L1PB1 LINE L1 5742 6530 -337 244 177 41 34 chr18 11715939 11716086 -74961462 + (TA)n Simple_repeat Simple_repeat 1 148 0 2370 114 20 6 chr18 11716086 11716444 -74961104 + L1PB1 LINE L1 6499 6861 -6 14683 116 12 30 chr18 11716449 11717212 -74960336 + MER41B-int LTR ERV1 3661 4437 -1509 2233 114 3 3 chr18 11717212 11717511 -74960037 + AluY SINE Alu 1 299 -12 14683 116 12 30 chr18 11717511 11719076 -74958472 + MER41B-int LTR ERV1 4437 5946 0 2804 180 33 26 chr18 11719076 11719620 -74957928 + MER41B LTR ERV1 1 548 -87 1053 150 66 9 chr18 11719613 11719826 -74957722 + MER34B LTR ERV1 334 558 -7 * 1743 185 0 25 chr18 11720370 11720684 -74956864 + AluJo SINE Alu 1 306 -6 1631 189 24 10 chr18 11722086 11722383 -74955165 - AluJo SINE Alu -11 301 1 614 133 33 0 chr18 11722410 11722500 -74955048 + AluSg/x SINE Alu 102 194 -118 1967 178 72 38 chr18 11722507 11722951 -74954597 + LTR2B LTR ERV1 32 490 0 7538 98 17 19 chr18 11722951 11724495 -74953053 + Harlequin LTR ERV1 1 1584 -5312 4786 99 80 90 chr18 11724598 11725654 -74951894 + Harlequin LTR ERV1 1366 2410 -4486 346 153 9 0 chr18 11725761 11725820 -74951728 + MLT1E2 LTR MaLR 404 626 0 1998 204 17 17 chr18 11725850 11726261 -74951287 - MLT1E2 LTR MaLR 0 626 216 1958 131 32 0 chr18 11726262 11726544 -74951004 - AluY SINE Alu -20 291 1 1826 81 5 0 chr18 11726551 11726773 -74950775 - AluSp SINE Alu -22 291 69 361 146 52 14 chr18 11726873 11727087 -74950461 + (TG)n Simple_repeat Simple_repeat 1 222 0 1013 255 118 21 chr18 11727087 11727510 -74950038 + LTR16B LTR ERVL 1 464 0 608 290 29 68 chr18 11727820 11728130 -74949418 + HERV16 LTR ERVL 372 669 -4327 1652 229 45 40 chr18 11728290 11728448 -74949100 + MER110 LTR ERV1 66 222 -269 1685 177 7 17 chr18 11728448 11728748 -74948800 + AluJo SINE Alu 5 301 -11 1652 229 45 40 chr18 11728748 11729013 -74948535 + MER110 LTR ERV1 222 491 0 2281 108 0 0 chr18 11729914 11730211 -74947337 + AluSx SINE Alu 1 297 -15 200 354 102 27 chr18 11730550 11730697 -74946851 + L2 LINE L2 2726 2883 -431 1910 138 24 14 chr18 11730964 11731260 -74946288 - AluSx SINE Alu -13 299 1 1529 167 0 0 chr18 11733069 11733297 -74944251 + AluJo SINE Alu 1 228 -84 1972 142 75 143 chr18 11733438 11734149 -74943399 - MER4A LTR ERV1 0 664 3 903 234 31 31 chr18 11734405 11734631 -74942917 + MLT1A1 LTR MaLR 1 226 -139 256 267 17 0 chr18 11734632 11734692 -74942856 - MLT1A1 LTR MaLR -89 276 216 1605 166 0 104 chr18 11735001 11735136 -74942412 + AluJo SINE Alu 1 148 -164 2283 82 0 3 chr18 11735136 11735429 -74942119 + AluY SINE Alu 5 296 -15 1605 166 0 104 chr18 11735429 11735630 -74941918 + AluJo SINE Alu 148 302 -10 2258 86 28 8 chr18 11735664 11736060 -74941488 - LTR7 LTR ERV1 -2 448 1 683 286 87 44 chr18 11736542 11736909 -74940639 + MLT1I LTR MaLR 27 409 0 2066 168 128 2 chr18 11738692 11739098 -74938450 + LTR32 LTR ERVL 15 471 0 204 339 46 0 chr18 11739098 11739163 -74938385 - MIR SINE MIR -163 99 32 860 178 13 0 chr18 11739326 11739478 -74938070 - MLT1A1 LTR MaLR 0 365 212 382 151 0 55 chr18 11739489 11739562 -74937986 - MLT1A1 LTR MaLR -296 69 1 1058 209 88 0 chr18 11739636 11739851 -74937697 - MLT1E LTR MaLR 0 593 360 416 221 58 0 chr18 11739892 11739978 -74937570 - MLT1E LTR MaLR -410 183 93 232 301 14 0 chr18 11740096 11740169 -74937379 + MER69 DNA AcHobo 16 89 -1137 264 169 324 0 chr18 11740231 11740302 -74937246 - MER69 DNA AcHobo -2430 96 3 558 136 0 0 chr18 11740673 11740791 -74936757 + (TG)n Simple_repeat Simple_repeat 1 118 0 48562 59 34 18 chr18 11742437 11748784 -74928764 + Harlequin LTR ERV1 448 6896 0 1898 189 69 35 chr18 11748803 11749238 -74928310 + LTR2B LTR ERV1 32 481 -9 736 174 8 0 chr18 11749238 11749359 -74928189 + AluSg/x SINE Alu 164 285 -25 22 0 0 0 chr18 11749359 11749381 -74928167 + AT_rich Low_complexity Low_complexity 1 22 0 3178 157 71 36 chr18 11749554 11750267 -74927281 - LTR48 LTR ERV1 -7 780 1 24 53 0 0 chr18 11750298 11750336 -74927212 + AT_rich Low_complexity Low_complexity 1 38 0 1621 179 13 23 chr18 11750391 11750692 -74926856 + AluJo SINE Alu 1 298 -14 6608 24 0 0 chr18 11751046 11751795 -74925753 + L1PA3 LINE L1 5404 6152 -3 1662 169 0 34 chr18 11752082 11752402 -74925146 - AluJb SINE Alu -3 309 1 1511 200 81 84 chr18 11752643 11753104 -74924444 - L1M4 LINE L1 -1152 4994 4534 2058 139 0 7 chr18 11753104 11753405 -74924143 + AluSg SINE Alu 1 299 -11 1511 200 81 84 chr18 11753405 11753633 -74923915 - L1M4 LINE L1 -1612 4534 4307 2319 172 66 15 chr18 11753797 11754308 -74923240 - MER39 LTR ERV1 -3 704 1 1586 199 3 0 chr18 11754405 11754702 -74922846 + L1M3 LINE L1 4635 4932 -1214 1277 219 99 66 chr18 11754731 11755248 -74922300 + MER34C LTR ERV1 52 585 0 2195 175 107 6 chr18 11755248 11755431 -74922117 + L1M3 LINE L1 4930 5093 -1087 2136 102 3 41 chr18 11755431 11755749 -74921799 + AluSq SINE Alu 1 307 0 2195 175 107 6 chr18 11755749 11756297 -74921251 + L1M3 LINE L1 5093 5723 -457 2330 122 0 0 chr18 11756413 11756725 -74920823 - AluSx SINE Alu 0 312 1 254 255 0 0 chr18 11756801 11756852 -74920696 + L2 LINE L2 2999 3049 -223 359 286 100 7 chr18 11756952 11757092 -74920456 + MIR SINE MIR 34 186 -76 1695 182 80 35 chr18 11757228 11757630 -74919918 - LTR8A LTR ERV1 0 727 308 1501 199 0 4 chr18 11757683 11757950 -74919598 + AluSx SINE Alu 1 266 -46 949 166 43 0 chr18 11757956 11758119 -74919429 + AluSg/x SINE Alu 138 307 -5 210 191 0 0 chr18 11758134 11758176 -74919372 + GA-rich Low_complexity Low_complexity 4 45 0 896 215 12 135 chr18 11758180 11758464 -74919084 - LTR8 LTR ERV1 -435 256 1 246 128 0 0 chr18 11758517 11758556 -74918992 + (TGAA)n Simple_repeat Simple_repeat 4 42 0 2553 152 148 6 chr18 11758927 11759448 -74918100 - LTR49 LTR ERV1 0 595 1 822 193 87 43 chr18 11759540 11759747 -74917801 + MER20 DNA MER1_type 1 216 -3 1072 196 138 20 chr18 11759782 11760123 -74917425 - LTR37A LTR ERV1 0 426 46 1813 157 10 3 chr18 11760248 11760547 -74917001 - AluSq SINE Alu -12 301 1 239 310 11 46 chr18 11760613 11760700 -74916848 - MER5A DNA MER1_type -97 92 9 2165 176 105 116 chr18 11760918 11761137 -74916411 - LTR8A LTR ERV1 0 727 507 2128 99 99 34 chr18 11761137 11761491 -74916057 + MER51B LTR ERV1 1 377 0 2165 176 105 116 chr18 11761491 11762006 -74915542 - LTR8A LTR ERV1 -220 507 1 22 35 0 0 chr18 11762043 11762072 -74915476 + AT_rich Low_complexity Low_complexity 1 29 0 1248 191 0 5 chr18 11762123 11762336 -74915212 - LTR24 LTR ERV1 0 467 256 782 151 40 0 chr18 11762336 11762462 -74915086 - LTR9 LTR ERV1 0 612 482 4015 151 86 35 chr18 11762463 11763869 -74913679 - pTR5 LTR ERV1 0 2606 1524 3131 135 2 32 chr18 11763869 11764374 -74913174 - LTR9 LTR ERV1 -122 490 1 1718 186 41 12 chr18 11764405 11764749 -74912799 - MER4D LTR ERV1 0 903 550 1802 144 14 0 chr18 11764783 11765061 -74912487 - MER49 LTR ERV1 -641 282 1 1283 110 151 9 chr18 11765061 11765259 -74912289 - LTR24 LTR ERV1 -238 229 1 2658 161 89 25 chr18 11765403 11765805 -74911743 + LTR49 LTR ERV1 1 376 -219 2770 110 22 25 chr18 11765805 11766130 -74911418 + LTR56 LTR ERV1 1 326 -119 2227 127 0 13 chr18 11766130 11766446 -74911102 + AluSx SINE Alu 1 312 0 2770 110 22 25 chr18 11766446 11766566 -74910982 + LTR56 LTR ERV1 326 445 0 2658 161 89 25 chr18 11766566 11766686 -74910862 + LTR49 LTR ERV1 376 564 -31 2284 153 51 10 chr18 11766686 11767097 -74910451 + MSTA LTR MaLR 1 428 0 2658 161 89 25 chr18 11767097 11767132 -74910416 + LTR49 LTR ERV1 564 595 0 3745 169 58 50 chr18 11767198 11767529 -74910019 - MER4E LTR ERV1 0 779 452 2116 113 31 0 chr18 11767529 11767822 -74909726 + AluSx SINE Alu 1 302 -10 3745 169 58 50 chr18 11767822 11768053 -74909495 - MER4E LTR ERV1 -327 452 207 1669 68 0 23 chr18 11768053 11768272 -74909276 + AluY SINE Alu 98 311 0 3745 169 58 50 chr18 11768272 11768481 -74909067 - MER4E LTR ERV1 -572 207 1 1527 207 125 23 chr18 11768555 11768979 -74908569 + MER39 LTR ERV1 116 707 0 380 302 181 19 chr18 11769083 11769379 -74908169 + Charlie8 DNA MER1_type 73 442 -1975 2260 98 3 35 chr18 11769379 11769696 -74907852 + AluSx SINE Alu 1 307 -5 380 302 181 19 chr18 11769696 11769770 -74907778 + Charlie8 DNA MER1_type 442 503 -1914 259 209 90 0 chr18 11769883 11769950 -74907598 + Charlie8 DNA MER1_type 440 512 -1905 239 167 21 21 chr18 11769966 11770014 -74907534 + Charlie8 DNA MER1_type 2360 2407 -10 647 241 23 45 chr18 11770072 11770337 -74907211 + L1MC5 LINE L1 7522 7780 -181 67 65 0 0 chr18 11770590 11770713 -74906835 + AT_rich Low_complexity Low_complexity 1 123 0 2048 130 14 3 chr18 11771354 11771647 -74905901 - AluSq SINE Alu -17 296 1 219 293 16 73 chr18 11771789 11771874 -74905674 + MIR3 SINE MIR 59 136 -72 2416 166 81 48 chr18 11771874 11772243 -74905305 + MER89 LTR ERV1 1 395 -164 1714 171 4 0 chr18 11772243 11772507 -74905041 - AluSq SINE Alu -48 265 1 2416 166 81 48 chr18 11772507 11772678 -74904870 + MER89 LTR ERV1 395 559 0 219 293 16 73 chr18 11772678 11772715 -74904833 + MIR3 SINE MIR 136 174 -34 230 294 0 15 chr18 11772743 11772811 -74904737 - L2 LINE L2 -3 3310 3244 219 385 20 0 chr18 11773053 11773201 -74904347 - L2 LINE L2 -400 2914 2764 3571 174 13 3 chr18 11773224 11773840 -74903708 + LTR26E LTR ERV1 1 622 0 4702 172 15 31 chr18 11773886 11774814 -74902734 + L1MB7 LINE L1 5256 6168 -16 2100 145 0 0 chr18 11774861 11775172 -74902376 + AluSx SINE Alu 1 311 -1 2137 201 15 39 chr18 11775172 11775217 -74902331 + MLT1E2 LTR MaLR 180 225 -401 2314 78 32 0 chr18 11775217 11775499 -74902049 + AluY SINE Alu 1 291 -20 2137 201 15 39 chr18 11775499 11775911 -74901637 + MLT1E2 LTR MaLR 225 626 0 346 153 9 0 chr18 11775941 11776000 -74901548 - MLT1D LTR MaLR 0 505 404 558 136 0 0 chr18 11777509 11777627 -74899921 + (CA)n Simple_repeat Simple_repeat 1 118 0 264 169 324 0 chr18 11777998 11778069 -74899479 + MER69 DNA AcHobo 3 96 -2430 232 301 14 0 chr18 11778131 11778204 -74899344 - MER69 DNA AcHobo -1137 89 16 416 221 58 0 chr18 11778322 11778408 -74899140 + MLT1E LTR MaLR 93 183 -410 1058 209 88 0 chr18 11778449 11778664 -74898884 + MLT1E LTR MaLR 360 593 0 382 151 0 55 chr18 11778738 11778811 -74898737 + MLT1A1 LTR MaLR 1 69 -296 860 178 13 0 chr18 11778822 11778974 -74898574 + MLT1A1 LTR MaLR 212 365 0 204 339 46 0 chr18 11779137 11779202 -74898346 + MIR SINE MIR 32 99 -163 2066 168 128 2 chr18 11779202 11779608 -74897940 - LTR32 LTR ERVL 0 471 15 683 286 87 44 chr18 11781391 11781758 -74895790 - MLT1I LTR MaLR 0 409 27 2258 86 28 8 chr18 11782240 11782636 -74894912 + LTR7 LTR ERV1 1 448 -2 1068 147 0 81 chr18 11782670 11782868 -74894680 - AluJo SINE Alu -10 302 121 2180 108 0 3 chr18 11782871 11783168 -74894380 - AluY SINE Alu -15 296 1 359 202 0 22 chr18 11783280 11783369 -74894179 - L1MB3 LINE L1 -1414 4732 4646 * 1104 198 61 0 chr18 11783366 11783629 -74893919 + L1MB3 LINE L1 4716 4994 -1152 1662 169 0 34 chr18 11783870 11784190 -74893358 + AluJb SINE Alu 1 309 -3 6608 24 0 0 chr18 11784477 11785226 -74892322 - L1PA3 LINE L1 -3 6152 5404 1621 179 13 23 chr18 11785580 11785881 -74891667 - AluJo SINE Alu -14 298 1 24 53 0 0 chr18 11785936 11785974 -74891574 + AT_rich Low_complexity Low_complexity 1 38 0 3178 157 71 36 chr18 11786005 11786718 -74890830 + LTR48 LTR ERV1 1 780 -7 22 0 0 0 chr18 11786891 11786913 -74890635 + AT_rich Low_complexity Low_complexity 1 22 0 736 174 8 0 chr18 11786913 11787034 -74890514 - AluSg/x SINE Alu -25 287 166 1898 189 69 35 chr18 11787034 11787469 -74890079 - LTR2B LTR ERV1 -9 481 32 25954 61 4 3 chr18 11787488 11792562 -74884986 - Harlequin LTR ERV1 0 6896 1757 510 109 54 7 chr18 11792680 11792827 -74884721 + (CA)n Simple_repeat Simple_repeat 1 154 0 574 145 28 28 chr18 11792841 11793020 -74884528 + (CA)n Simple_repeat Simple_repeat 2 180 0 1129 150 4 90 chr18 11793483 11793716 -74883832 + AluJo SINE Alu 75 287 -25 2857 195 4 0 chr18 11793745 11794272 -74883276 + L1MB3 LINE L1 5652 6180 -3 234 194 0 90 chr18 11795224 11795291 -74882257 + L2 LINE L2 3209 3269 -3 3784 187 9 25 chr18 11795691 11795733 -74881815 + L1MB3 LINE L1 5446 5487 -696 1917 164 0 0 chr18 11795733 11796020 -74881528 + AluJo SINE Alu 2 288 -24 3784 187 9 25 chr18 11796020 11796727 -74880821 + L1MB3 LINE L1 5487 6183 0 221 279 154 0 chr18 11796905 11797009 -74880539 - MIR3 SINE MIR -7 201 82 1823 156 3 36 chr18 11797156 11797458 -74880090 + AluJo SINE Alu 1 292 -20 364 254 18 55 chr18 11797746 11797856 -74879692 - L2 LINE L2 -5 3267 3162 239 130 0 22 chr18 11798042 11798088 -74879460 + (TGGG)n Simple_repeat Simple_repeat 2 46 0 1511 242 120 21 chr18 11798126 11798651 -74878897 - MLT2F LTR ERVL -86 577 1 186 309 43 11 chr18 11798668 11798762 -74878786 - L2 LINE L2 -208 3064 2968 226 273 0 62 chr18 11798977 11799004 -74878544 + C-rich Low_complexity Low_complexity 2 29 -92 696 152 30 23 chr18 11799004 11799136 -74878412 - FLAM_A SINE Alu 0 133 1 226 273 0 62 chr18 11799136 11799236 -74878312 + C-rich Low_complexity Low_complexity 29 121 0 188 67 33 0 chr18 11799713 11799743 -74877805 + (GGGA)n Simple_repeat Simple_repeat 4 34 0 2603 222 42 2 chr18 11799851 11800427 -74877121 - MER77 LTR ERV1 -3 602 4 1603 130 11 27 chr18 11800732 11800993 -74876555 - AluJo SINE Alu -15 297 41 448 250 71 14 chr18 11801033 11801173 -74876375 - MIR SINE MIR -8 254 107 7418 106 19 4 chr18 11801790 11803473 -74874075 - L1MA1 LINE L1 -4 6298 4591 235 129 0 48 chr18 11804104 11804166 -74873382 + (TTA)n Simple_repeat Simple_repeat 3 61 0 3376 109 24 0 chr18 11804166 11804669 -74872879 + L1MA2 LINE L1 5786 6300 -4 23 33 0 0 chr18 11804669 11804699 -74872849 + AT_rich Low_complexity Low_complexity 1 30 0 919 236 110 136 chr18 11805062 11805143 -74872405 - MER21B LTR ERV1 -7 598 516 890 134 0 0 chr18 11805143 11805270 -74872278 + FLAM_C SINE Alu 1 127 -6 919 236 110 136 chr18 11805270 11805283 -74872265 - MER21B LTR ERV1 -89 516 504 1663 176 10 20 chr18 11805283 11805584 -74871964 + AluJo SINE Alu 3 300 -12 919 236 110 136 chr18 11805584 11806152 -74871396 - MER21B LTR ERV1 -101 504 121 4438 132 88 18 chr18 11806300 11807065 -74870483 - MER4D LTR ERV1 -85 818 1 474 221 7 66 chr18 11807065 11807201 -74870347 - MIR SINE MIR -86 176 49 304 277 45 32 chr18 11807891 11808046 -74869502 + MIR SINE MIR 8 164 -98 640 160 0 0 chr18 11808521 11808621 -74868927 - FLAM_C SINE Alu -33 110 11 225 150 50 0 chr18 11808836 11808876 -74868672 + GA-rich Low_complexity Low_complexity 2 43 0 3046 125 70 22 chr18 11808908 11809453 -74868095 + LTR24B LTR ERV1 3 631 -4 329 248 99 0 chr18 11809514 11809615 -74867933 - L2 LINE L2 -1 3312 3202 2228 105 3 3 chr18 11810656 11810952 -74866596 - AluSx SINE Alu -14 298 3 2123 138 3 0 chr18 11811331 11811628 -74865920 - AluSx SINE Alu -14 298 1 382 175 0 0 chr18 11811761 11811824 -74865724 - AluS SINE Alu -6 295 233 1997 146 10 0 chr18 11812890 11813198 -74864350 + AluJo SINE Alu 1 311 -1 369 306 7 34 chr18 11813503 11813650 -74863898 + MIR SINE MIR 37 179 -83 1419 165 114 25 chr18 11813931 11814064 -74863484 - MER2 DNA MER2_type 0 344 224 2659 45 0 16 chr18 11814064 11814376 -74863172 - AluY SINE Alu -4 307 1 1419 165 114 25 chr18 11814376 11814558 -74862990 - MER2 DNA MER2_type -120 224 1 266 339 63 31 chr18 11814577 11814704 -74862844 + MIR3 SINE MIR 30 160 -48 202 337 0 12 chr18 11814892 11814975 -74862573 - MIR SINE MIR -13 249 168 2043 151 3 0 chr18 11815013 11815317 -74862231 + AluJb SINE Alu 1 305 -7 1235 195 8 112 chr18 11815464 11815863 -74861685 - MLT1E3 LTR MaLR 0 624 289 644 170 0 0 chr18 11815863 11815969 -74861579 + FLAM_C SINE Alu 27 132 -11 1030 207 102 4 chr18 11815974 11816230 -74861318 - MLT1E3 LTR MaLR -330 324 44 323 300 20 0 chr18 11817130 11817230 -74860318 - MIR SINE MIR -114 148 47 408 264 149 0 chr18 11818098 11818246 -74859302 - MIR SINE MIR -44 218 49 1010 99 0 93 chr18 11818888 11819070 -74858478 - AluSg/x SINE Alu -10 300 136 1186 120 0 29 chr18 11819082 11819257 -74858291 - AluSq SINE Alu -143 170 1 2253 106 7 0 chr18 11821168 11821460 -74856088 - AluSx SINE Alu -18 294 1 827 167 8 0 chr18 11821718 11821850 -74855698 + FLAM_C SINE Alu 1 133 0 5526 122 20 19 chr18 11821875 11822042 -74855506 + L1MC1 LINE L1 5445 5610 -723 2197 104 3 38 chr18 11822042 11822360 -74855188 + AluSx SINE Alu 1 307 -5 5526 122 20 19 chr18 11822360 11823079 -74854469 + L1MC1 LINE L1 5610 6332 -1 425 237 136 77 chr18 11823423 11823446 -74854102 - MER5A DNA MER1_type 0 189 169 2523 134 49 5 chr18 11823446 11823856 -74853692 - MSTA LTR MaLR 0 428 1 425 237 136 77 chr18 11823856 11824001 -74853547 - MER5A DNA MER1_type -20 169 11 1071 244 4 4 chr18 11824586 11824844 -74852704 + LTR37B LTR ERV1 50 307 -161 809 136 0 0 chr18 11824885 11825003 -74852545 - FLAM_C SINE Alu -15 118 1 732 89 36 27 chr18 11825030 11825142 -74852406 + AluJb SINE Alu 23 135 -177 894 128 40 7 chr18 11825142 11825291 -74852257 + LTR37B LTR ERV1 315 468 0 2450 167 70 45 chr18 11825559 11825669 -74851879 + MLT1F1 LTR MaLR 27 133 -434 1701 174 7 4 chr18 11825669 11825996 -74851552 - AluJb SINE Alu 0 328 1 2450 167 70 45 chr18 11825996 11826412 -74851136 + MLT1F1 LTR MaLR 133 567 0 445 242 47 77 chr18 11826412 11826672 -74850876 - L1MC/D LINE L1 -518 5603 5373 681 337 92 0 chr18 11826913 11827219 -74850329 + LTR16A LTR ERVL 117 450 0 311 254 28 0 chr18 11827556 11827627 -74849921 + L2 LINE L2 3241 3313 0 2322 97 3 3 chr18 11828846 11829146 -74848402 + AluSq SINE Alu 1 300 -13 756 308 112 46 chr18 11829938 11830481 -74847067 + L1MEd LINE L1 59 565 -5554 1524 165 98 61 chr18 11830481 11830793 -74846755 + MLT1B LTR MaLR 1 331 -59 1845 142 11 4 chr18 11830793 11831074 -74846474 + AluJo SINE Alu 17 299 -13 1524 165 98 61 chr18 11831074 11831137 -74846411 + MLT1B LTR MaLR 331 390 0 756 308 112 46 chr18 11831137 11831613 -74845935 + L1MEd LINE L1 565 1145 -4974 1044 223 9 14 chr18 11831663 11831883 -74845665 + AluJo SINE Alu 1 219 -93 469 301 79 17 chr18 11831883 11832260 -74845288 + L1MEd LINE L1 1174 1635 -855 2653 99 6 8 chr18 11832612 11832977 -74844571 + THE1B LTR MaLR 1 364 0 226 229 0 24 chr18 11833253 11833336 -74844212 - L1MEc LINE L1 -4907 1489 1409 2164 112 10 3 chr18 11833529 11833823 -74843725 + AluSx SINE Alu 15 310 -2 207 0 0 0 chr18 11833827 11833850 -74843698 + (A)n Simple_repeat Simple_repeat 1 23 0 1069 89 15 0 chr18 11833966 11834101 -74843447 - AluSq/x SINE Alu -175 137 1 1010 208 58 12 chr18 11834108 11834464 -74843084 - L1ME LINE L1 -690 5476 5100 1801 139 45 21 chr18 11834464 11834751 -74842797 - AluJb SINE Alu -18 294 1 1010 208 58 12 chr18 11834751 11834770 -74842778 - L1ME LINE L1 -1066 5100 5083 2598 4 0 0 chr18 11834772 11835047 -74842501 + AluYa5 SINE Alu 37 311 0 2237 103 0 14 chr18 11836871 11837162 -74840386 - AluSx SINE Alu -22 290 4 1658 157 21 14 chr18 11837653 11837934 -74839614 + AluJo SINE Alu 14 296 -16 33 0 0 0 chr18 11838227 11838260 -74839288 + AT_rich Low_complexity Low_complexity 1 33 0 1084 160 0 12 chr18 11838260 11838429 -74839119 - FAM SINE Alu -8 167 1 2233 40 0 15 chr18 11838542 11838921 -74838627 + L1P2 LINE L1 5157 5531 -623 210 37 0 0 chr18 11838921 11838948 -74838600 + (T)n Simple_repeat Simple_repeat 1 27 0 1707 214 57 44 chr18 11839083 11839239 -74838309 + L1ME1 LINE L1 5482 5635 -531 2257 97 7 3 chr18 11839239 11839538 -74838010 - AluSq SINE Alu -13 300 1 1707 214 57 44 chr18 11839538 11839858 -74837690 + L1ME1 LINE L1 5635 5964 -202 298 274 41 14 chr18 11839860 11839933 -74837615 + L1ME1 LINE L1 6014 6088 -78 1346 162 203 36 chr18 11839933 11840352 -74837196 - LTR54B LTR ERV1 -2 496 8 326 206 0 0 chr18 11840356 11840419 -74837129 + L1ME2 LINE L1 6083 6145 -19 1938 154 10 0 chr18 11840434 11840739 -74836809 + AluJb SINE Alu 3 310 -2 252 0 0 0 chr18 11841040 11841068 -74836480 + (CA)n Simple_repeat Simple_repeat 1 28 0 390 211 21 21 chr18 11841709 11841804 -74835744 + L1MB7 LINE L1 3601 3695 -2451 2461 68 10 0 chr18 11841808 11842101 -74835447 + AluSc SINE Alu 1 296 -13 279 164 0 36 chr18 11842101 11842148 -74835400 + L1MB1 LINE L1 6121 6167 -1 2197 111 0 0 chr18 11842528 11842826 -74834722 + AluSx SINE Alu 3 300 -12 23 54 0 0 chr18 11843131 11843168 -74834380 + AT_rich Low_complexity Low_complexity 1 37 0 2310 81 0 3 chr18 11843183 11843494 -74834054 + AluSx SINE Alu 1 310 0 1749 186 7 3 chr18 11843690 11843986 -74833562 - AluJb SINE Alu -15 297 1 216 280 38 61 chr18 11844435 11844567 -74832981 + MIR SINE MIR 133 261 -1 3833 101 6 21 chr18 11844870 11845405 -74832143 + MER1A DNA MER1_type 1 527 0 195 42 0 0 chr18 11845557 11845581 -74831967 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2182 107 27 0 chr18 11845584 11845882 -74831666 - AluSc SINE Alu -3 306 1 3291 174 43 26 chr18 11846334 11846973 -74830575 + L1MB7 LINE L1 4645 5272 -912 180 0 0 0 chr18 11846973 11846993 -74830555 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3291 174 43 26 chr18 11846993 11847134 -74830414 + L1MB7 LINE L1 5272 5409 -775 2517 75 0 3 chr18 11847134 11847442 -74830106 + AluY SINE Alu 1 307 -4 3291 174 43 26 chr18 11847442 11847562 -74829986 + L1MB7 LINE L1 5409 5525 -659 1854 174 0 0 chr18 11847562 11847861 -74829687 + AluJb SINE Alu 1 299 -13 3291 174 43 26 chr18 11847861 11848276 -74829272 + L1MB7 LINE L1 5525 6031 -153 313 278 40 8 chr18 11848598 11848724 -74828824 + MIR SINE MIR 130 259 -3 2021 124 17 17 chr18 11849218 11849516 -74828032 + AluSx SINE Alu 1 298 -14 561 286 88 11 chr18 11850135 11850317 -74827231 - LTR16A LTR ERVL -22 428 233 522 219 0 10 chr18 11850320 11850416 -74827132 - HERVL40 LTR ERVL -2913 2617 2523 575 306 24 40 chr18 11850503 11850751 -74826797 - HERVL40 LTR ERVL -4022 1508 1265 268 290 91 27 chr18 11850838 11851024 -74826524 - HERVL40 LTR ERVL -5332 198 1 2036 208 139 4 chr18 11851027 11851479 -74826069 - LTR40a LTR ERVL -3 516 4 1976 111 52 47 chr18 11851543 11851905 -74825643 + THE1B LTR MaLR 1 364 0 11800 99 9 8 chr18 11851905 11853404 -74824144 + THE1B-int LTR MaLR 1 1503 -77 2724 36 0 0 chr18 11853404 11853707 -74823841 + AluY SINE Alu 1 303 -8 11800 99 9 8 chr18 11853707 11853786 -74823762 + THE1B-int LTR MaLR 1503 1580 0 1146 116 24 0 chr18 11853786 11853950 -74823598 + THE1B LTR MaLR 1 168 -207 3302 168 57 47 chr18 11855057 11855777 -74821771 - LTR8A LTR ERV1 0 727 1 825 234 53 13 chr18 11855787 11856014 -74821534 + MIR SINE MIR 6 241 -21 282 312 143 5 chr18 11856211 11856400 -74821148 - MIR SINE MIR -14 248 34 27 0 0 0 chr18 11856627 11856654 -74820894 + AT_rich Low_complexity Low_complexity 1 27 0 2231 115 0 3 chr18 11857664 11857977 -74819571 - AluSx SINE Alu 0 312 1 346 268 102 0 chr18 11858522 11858649 -74818899 + MIR3 SINE MIR 6 145 -63 1179 173 72 22 chr18 11858926 11858968 -74818580 - MER33 DNA MER1_type -2261 324 286 1896 154 14 3 chr18 11858968 11859261 -74818287 + AluSx SINE Alu 1 296 -16 1179 173 72 22 chr18 11859261 11859496 -74818052 - MER33 DNA MER1_type -2299 286 33 1745 103 66 6 chr18 11859501 11859793 -74817755 + LTR45B LTR ERV1 11 355 -134 1588 169 21 18 chr18 11860854 11861133 -74816415 - AluJb SINE Alu -21 291 12 995 132 0 0 chr18 11861526 11861662 -74815886 + AluSq/x SINE Alu 1 136 -176 1269 82 6 0 chr18 11861662 11861833 -74815715 + L1PA5 LINE L1 5982 6153 -1 458 229 19 0 chr18 11861863 11861968 -74815580 - MER112 DNA MER1_type -150 110 4 1507 209 3 54 chr18 11862044 11862379 -74815169 - MER2 DNA MER2_type 0 345 28 439 265 15 11 chr18 11862589 11862773 -74814775 - MER41B LTR ERV1 -205 430 112 250 128 0 0 chr18 11862940 11862979 -74814569 - MER2 DNA MER2_type -306 39 1 2149 112 3 10 chr18 11863029 11863325 -74814223 + AluSp SINE Alu 1 294 -19 243 0 0 0 chr18 11863600 11863627 -74813921 + (A)n Simple_repeat Simple_repeat 1 27 0 2479 85 10 0 chr18 11865620 11865949 -74811599 - AluSg SINE Alu 0 332 1 2389 135 29 58 chr18 11866257 11866702 -74810846 - MSTB1 LTR MaLR 0 432 1 221 95 0 24 chr18 11866705 11866747 -74810801 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 235 117 0 57 chr18 11866964 11867012 -74810536 + MIR SINE MIR 104 123 -85 1858 161 7 16 chr18 11867012 11867317 -74810231 + AluJb SINE Alu 1 302 -10 235 117 0 57 chr18 11867317 11867336 -74810212 + MIR SINE MIR 123 142 -66 2247 113 3 0 chr18 11867337 11867646 -74809902 + AluSx SINE Alu 3 312 0 380 211 39 78 chr18 11867974 11868102 -74809446 + MER91B DNA MER1_type 8 130 -60 1278 170 3 109 chr18 11868843 11869173 -74808375 + AluJo SINE Alu 4 298 -4 914 137 0 36 chr18 11869178 11869317 -74808231 + AluJo SINE Alu 1 134 -178 2528 138 77 33 chr18 11869778 11870082 -74807466 - LTR64 LTR ERVK 0 513 177 1877 131 32 35 chr18 11870082 11870395 -74807153 - AluJo SINE Alu 0 312 1 2528 138 77 33 chr18 11870395 11870581 -74806967 - LTR64 LTR ERVK -336 177 1 2112 184 124 4 chr18 11872160 11872611 -74804937 + MLT1D LTR MaLR 1 505 0 2644 122 5 5 chr18 11872625 11873017 -74804531 - L1PA13 LINE L1 0 6163 5772 255 88 0 0 chr18 11873017 11873051 -74804497 + L1PA13 LINE L1 5709 5742 -561 1711 181 7 7 chr18 11873346 11873657 -74803891 + AluJb SINE Alu 1 311 0 2292 83 0 3 chr18 11874481 11874769 -74802779 + AluSx SINE Alu 1 287 -25 778 303 66 4 chr18 11874925 11875196 -74802352 - L1MC4a LINE L1 -1907 5901 5614 342 212 91 10 chr18 11875297 11875396 -74802152 + MLT1H LTR MaLR 2 108 -441 1102 162 44 48 chr18 11875405 11875506 -74802042 - L1MA4 LINE L1 -2 6298 6198 2081 128 3 3 chr18 11875506 11875802 -74801746 - AluJb SINE Alu -16 296 1 1102 162 44 48 chr18 11875802 11875972 -74801576 - L1MA4 LINE L1 -102 6198 6028 701 243 153 26 chr18 11875972 11876372 -74801176 + MLT1H LTR MaLR 88 583 -7 21 0 0 0 chr18 11876922 11876943 -74800605 + AT_rich Low_complexity Low_complexity 1 21 0 2001 140 9 22 chr18 11876943 11876975 -74800573 - AluSx SINE Alu -1 311 280 261 0 0 0 chr18 11876975 11877004 -74800544 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 2001 140 9 22 chr18 11877004 11877286 -74800262 - AluSx SINE Alu -32 280 1 6043 21 15 1 chr18 11877290 11877946 -74799602 - SVA Other Other -1 1385 721 2506 132 40 49 chr18 11877960 11878466 -74799082 + L1MB3 LINE L1 5681 6181 -2 415 232 10 10 chr18 11878490 11878589 -74798959 + L1ME3A LINE L1 6069 6167 -3 498 178 57 96 chr18 11878603 11878760 -74798788 - MER112 DNA MER1_type -101 159 9 237 317 98 32 chr18 11879159 11879282 -74798266 - L3 LINE CR1 -70 1507 1377 2274 98 3 10 chr18 11880661 11880968 -74796580 + AluSx SINE Alu 1 305 -7 829 164 0 0 chr18 11881315 11881437 -74796111 + FLAM_C SINE Alu 5 126 -17 333 0 0 0 chr18 11881437 11881474 -74796074 + (CA)n Simple_repeat Simple_repeat 2 38 0 1199 244 37 10 chr18 11882067 11882366 -74795182 - MER21B LTR ERV1 -65 798 492 2183 175 51 45 chr18 11882377 11882872 -74794676 + L1M4 LINE L1 4038 4538 -1608 1220 225 82 7 chr18 11882872 11883152 -74794396 - AluJo SINE Alu -1 301 1 2183 175 51 45 chr18 11883152 11883209 -74794339 + L1M4 LINE L1 4538 4593 -1553 1816 73 9 0 chr18 11883247 11883467 -74794081 - AluSq SINE Alu -91 222 1 304 176 0 0 chr18 11883468 11883519 -74794029 + Cheshire DNA MER1_type 1484 1534 -886 1315 225 145 71 chr18 11883596 11884329 -74793219 - LTR1B LTR ERV1 -39 787 1 643 157 33 85 chr18 11884372 11884419 -74793129 + Cheshire DNA MER1_type 1514 1562 -858 1653 139 0 114 chr18 11884419 11884751 -74792797 + AluJb SINE Alu 1 294 -18 643 157 33 85 chr18 11884751 11884856 -74792692 + Cheshire DNA MER1_type 1562 1658 -762 3327 134 14 56 chr18 11884856 11885094 -74792454 + MLT2B3 LTR ERVL 3 249 -305 219 36 0 0 chr18 11885094 11885122 -74792426 + (TC)n Simple_repeat Simple_repeat 2 29 0 3327 134 14 56 chr18 11885122 11885459 -74792089 + MLT2B3 LTR ERVL 249 554 0 1689 183 10 0 chr18 11885463 11885758 -74791790 + MLT-int LTR MaLR 5 302 -1433 330 200 8 0 chr18 11885866 11885931 -74791617 - MLT-int LTR MaLR -999 372 295 6555 208 14 52 chr18 11885935 11886123 -74791425 + MLT1A1-int LTR MaLR 356 550 -1185 1708 164 0 11 chr18 11886123 11886385 -74791163 + AluJb SINE Alu 1 259 -53 6555 208 14 52 chr18 11886385 11887629 -74789919 + MLT1A1-int LTR MaLR 550 1734 -1 1460 189 32 59 chr18 11887630 11887935 -74789613 + MLT1A1 LTR MaLR 1 296 -69 2411 104 3 0 chr18 11887935 11888242 -74789306 - AluSq SINE Alu -5 308 1 1460 189 32 59 chr18 11888242 11888311 -74789237 + MLT1A1 LTR MaLR 296 365 0 1855 165 56 6 chr18 11888311 11888669 -74788879 + Cheshire DNA MER1_type 1652 2027 -393 1033 137 35 150 chr18 11888669 11888794 -74788754 + L1M4 LINE L1 4066 4204 -1942 1487 122 20 0 chr18 11888794 11889040 -74788508 + L1MA8 LINE L1 6035 6285 -6 1033 137 35 150 chr18 11889040 11889142 -74788406 + L1M4 LINE L1 4204 4250 -1896 1840 158 20 30 chr18 11889142 11889445 -74788103 + AluJo SINE Alu 3 302 -10 1033 137 35 150 chr18 11889445 11889530 -74788018 + L1M4 LINE L1 4250 4343 -1803 297 75 0 0 chr18 11889542 11889582 -74787966 + (TA)n Simple_repeat Simple_repeat 2 41 0 525 234 28 28 chr18 11889591 11889755 -74787793 + L1M4 LINE L1 4841 5004 -1142 288 0 0 0 chr18 11889810 11889842 -74787706 + (T)n Simple_repeat Simple_repeat 1 32 0 21 0 0 0 chr18 11889942 11889963 -74787585 + AT_rich Low_complexity Low_complexity 1 21 0 432 0 0 0 chr18 11890001 11890049 -74787499 + (T)n Simple_repeat Simple_repeat 1 48 0 1250 175 108 30 chr18 11890451 11890748 -74786800 - LTR40b LTR ERVL 0 462 143 2117 105 37 14 chr18 11890834 11891129 -74786419 + AluSx SINE Alu 1 302 -10 1013 259 109 17 chr18 11891525 11891946 -74785602 + L2 LINE L2 2316 2775 -539 411 189 27 0 chr18 11891949 11892023 -74785525 + FRAM/FAM SINE Alu 1 75 -91 264 122 0 0 chr18 11892024 11892065 -74785483 + (GGA)n Simple_repeat Simple_repeat 3 43 0 2189 129 0 0 chr18 11892298 11892600 -74784948 - AluSx SINE Alu -10 302 1 498 265 49 34 chr18 11892600 11892804 -74784744 + L2 LINE L2 3107 3313 0 1961 151 16 0 chr18 11893162 11893467 -74784081 + AluSq SINE Alu 1 310 -3 1677 157 7 31 chr18 11893525 11893836 -74783712 - AluJb SINE Alu 0 312 21 961 97 0 0 chr18 11893980 11894104 -74783444 + AluSq/x SINE Alu 9 132 -181 2211 116 7 3 chr18 11894106 11894409 -74783139 + AluSq SINE Alu 1 304 -9 186 43 0 0 chr18 11894922 11894945 -74782603 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 276 329 169 18 chr18 11894953 11895172 -74782376 - MIR SINE MIR -2 260 9 722 161 121 13 chr18 11895326 11895475 -74782073 - FRAM SINE Alu -1 165 1 317 240 8 48 chr18 11896383 11896508 -74781040 + MER113 DNA MER1_type? 3 122 -399 220 208 0 0 chr18 11896570 11896623 -74780925 + T-rich Low_complexity Low_complexity 4 56 0 2056 104 80 3 chr18 11896671 11896959 -74780589 - AluSx SINE Alu -2 310 1 240 218 26 51 chr18 11897007 11897085 -74780463 + MER110 LTR ERV1 87 162 -329 * 353 275 104 52 chr18 11897066 11897259 -74780289 + MER110 LTR ERV1 80 282 -209 639 165 0 0 chr18 11897274 11897377 -74780171 - FLAM_C SINE Alu -34 109 7 203 125 83 0 chr18 11897388 11897436 -74780112 + T-rich Low_complexity Low_complexity 2 53 0 2131 121 0 0 chr18 11898035 11898342 -74779206 - AluSq SINE Alu 0 307 1 803 204 19 0 chr18 11898438 11898595 -74778953 + FRAM SINE Alu 5 164 -2 392 268 55 16 chr18 11898690 11898817 -74778731 - MIR SINE MIR -74 188 57 1735 148 74 0 chr18 11899467 11899750 -74777798 - AluJo SINE Alu -7 305 2 2456 94 0 0 chr18 11900068 11900375 -74777173 + AluSp SINE Alu 1 307 -6 1905 117 78 0 chr18 11900387 11900669 -74776879 + AluSx SINE Alu 1 304 -8 223 188 38 12 chr18 11900669 11900749 -74776799 + (TA)n Simple_repeat Simple_repeat 1 82 0 521 231 32 75 chr18 11900817 11900957 -74776591 + MER112 DNA MER1_type 1 134 -126 1981 142 7 0 chr18 11900957 11901272 -74776276 - AluSx SINE Alu 0 317 1 521 231 32 75 chr18 11901272 11901316 -74776232 + MER112 DNA MER1_type 134 178 -82 1380 140 36 16 chr18 11901358 11901608 -74775940 - L1MB1 LINE L1 -8 6160 5906 25 0 0 0 chr18 11901636 11901661 -74775887 + AT_rich Low_complexity Low_complexity 1 25 0 2045 134 0 0 chr18 11901661 11901953 -74775595 - AluSx SINE Alu -20 292 1 1143 81 0 0 chr18 11901978 11902114 -74775434 + AluSq/x SINE Alu 1 136 -177 2149 107 0 0 chr18 11902114 11902417 -74775131 + AluSg SINE Alu 1 303 0 2477 87 0 3 chr18 11903302 11903612 -74773936 - AluSc SINE Alu 0 309 1 1900 130 58 7 chr18 11904866 11905159 -74772389 - AluJb SINE Alu -4 308 1 1254 313 90 39 chr18 11905236 11905525 -74772023 - L2 LINE L2 -5 3308 3035 2100 122 7 0 chr18 11905525 11905813 -74771735 + AluSx SINE Alu 12 301 -11 1254 313 90 39 chr18 11905813 11906663 -74770885 - L2 LINE L2 -278 3035 2096 2046 141 3 3 chr18 11906663 11906967 -74770581 + AluJb SINE Alu 6 309 -3 1254 313 90 39 chr18 11906967 11907112 -74770436 - L2 LINE L2 -1217 2096 1960 2140 132 3 0 chr18 11907312 11907616 -74769932 - AluSx SINE Alu -7 305 1 1074 110 0 20 chr18 11907616 11907762 -74769786 - AluSq/x SINE Alu -170 143 1 614 181 47 8 chr18 11908036 11908163 -74769385 - FLAM_A SINE Alu -1 132 1 2487 94 0 0 chr18 11908243 11908552 -74768996 - AluSc SINE Alu 0 309 1 1691 164 31 0 chr18 11908553 11908840 -74768708 - AluJo SINE Alu -16 296 1 2395 81 0 0 chr18 11909754 11910049 -74767499 - AluSx SINE Alu -17 295 1 2160 93 0 66 chr18 11910372 11910705 -74766843 - AluSx SINE Alu -1 311 1 285 29 0 0 chr18 11910907 11910915 -74766633 + (TG)n Simple_repeat Simple_repeat 1 42 0 285 29 0 0 chr18 11910915 11910949 -74766599 + (TG)n Simple_repeat Simple_repeat 1 34 0 1151 149 69 5 chr18 11911085 11911303 -74766245 - AluJb SINE Alu 0 314 85 191 227 15 0 chr18 11911306 11911372 -74766176 + (TA)n Simple_repeat Simple_repeat 2 68 0 26 30 0 0 chr18 11911491 11911524 -74766024 + AT_rich Low_complexity Low_complexity 1 33 0 209 309 54 40 chr18 11911675 11911824 -74765724 - L2 LINE L2 0 3313 3163 21 0 0 0 chr18 11913229 11913250 -74764298 + AT_rich Low_complexity Low_complexity 1 21 0 2096 120 0 13 chr18 11913337 11913653 -74763895 + AluSp SINE Alu 1 312 -1 1996 92 0 32 chr18 11913712 11913993 -74763555 - AluY SINE Alu -39 272 1 225 0 0 0 chr18 11914157 11914182 -74763366 + (A)n Simple_repeat Simple_repeat 1 25 0 2477 87 0 3 chr18 11915436 11915746 -74761802 + AluSc SINE Alu 1 309 0 2148 107 0 0 chr18 11916630 11916933 -74760615 - AluSg SINE Alu 0 303 1 958 120 0 8 chr18 11916933 11917066 -74760482 - AluSq/x SINE Alu -177 136 5 1464 182 10 34 chr18 11917314 11917610 -74759938 - AluJo SINE Alu -23 289 1 2571 138 46 11 chr18 11917612 11918046 -74759502 - L1PA16 LINE L1 -9 6157 5709 1392 153 108 22 chr18 11918095 11918363 -74759185 - AluJb SINE Alu -21 291 1 308 248 112 44 chr18 11918557 11918847 -74758701 + L1M1 LINE L1 5318 5570 -599 905 153 0 0 chr18 11918970 11919107 -74758441 + FRAM SINE Alu 1 137 -39 21 0 0 0 chr18 11919412 11919433 -74758115 + AT_rich Low_complexity Low_complexity 1 21 0 2252 117 0 0 chr18 11919435 11919734 -74757814 + AluSx SINE Alu 1 299 -13 1203 170 30 128 chr18 11920146 11920551 -74756997 - MLT1A1 LTR MaLR 0 365 1 1654 154 25 21 chr18 11920637 11921044 -74756504 - AluJb SINE Alu 0 408 1 1821 41 0 14 chr18 11921605 11921823 -74755725 - AluY SINE Alu -6 305 91 1027 199 47 9 chr18 11922914 11923125 -74754423 - MER45B DNA AcHobo -519 521 303 181 118 59 0 chr18 11923191 11923225 -74754323 + L2 LINE L2 3266 3301 -12 2381 79 0 41 chr18 11923347 11923664 -74753884 - AluY SINE Alu -2 309 6 279 289 96 58 chr18 11923726 11923830 -74753718 + L2 LINE L2 3149 3256 -16 2327 95 0 0 chr18 11923962 11924258 -74753290 - AluSg SINE Alu -14 296 1 5008 37 3 0 chr18 11924729 11925325 -74752223 + L1PA5 LINE L1 5553 6150 -4 21 0 0 0 chr18 11925353 11925374 -74752174 + AT_rich Low_complexity Low_complexity 1 21 0 289 237 0 26 chr18 11925462 11925576 -74751972 + CT-rich Low_complexity Low_complexity 1 111 0 1963 168 0 3 chr18 11925721 11926019 -74751529 - AluJo SINE Alu -15 297 1 240 238 48 0 chr18 11926861 11926924 -74750624 + MIR3 SINE MIR 125 190 -18 365 248 83 45 chr18 11927457 11927590 -74749958 + L2 LINE L2 3176 3313 0 678 268 154 12 chr18 11928103 11928524 -74749024 - L1ME4a LINE L1 -2 6119 5639 315 309 130 10 chr18 11928536 11928743 -74748805 - L1ME4a LINE L1 -531 5590 5359 215 314 0 23 chr18 11929408 11929494 -74748054 - MIR SINE MIR 0 262 179 195 42 0 0 chr18 11930638 11930662 -74746886 + (ATG)n Simple_repeat Simple_repeat 3 26 0 680 224 153 54 chr18 11930665 11930736 -74746812 - MIR SINE MIR -8 254 191 2990 159 39 45 chr18 11930736 11931351 -74746197 + LTR9 LTR ERV1 2 612 0 4312 90 15 0 chr18 11931361 11931952 -74745596 - MER4A LTR ERV1 0 600 1 680 224 153 54 chr18 11931952 11932092 -74745456 - MIR SINE MIR -79 183 10 631 261 198 18 chr18 11932100 11932434 -74745114 + MLT1L LTR MaLR 222 615 0 343 322 42 0 chr18 11932530 11932648 -74744900 - L2 LINE L2 -1 3312 3190 2549 46 3 0 chr18 11932880 11933185 -74744363 - AluY SINE Alu -5 306 1 310 245 130 16 chr18 11933720 11933904 -74743644 - L1MC5 LINE L1 -44 7917 7713 291 257 138 28 chr18 11935337 11935446 -74742102 + MIR SINE MIR 28 148 -114 209 280 93 0 chr18 11935461 11935536 -74742012 - L2 LINE L2 -1 3271 3190 * 224 319 168 0 chr18 11935534 11935653 -74741895 - MIR SINE MIR 0 262 124 356 339 124 30 chr18 11935827 11936222 -74741326 - L2 LINE L2 -343 2971 2540 264 250 0 0 chr18 11936341 11936421 -74741127 + CT-rich Low_complexity Low_complexity 2 81 0 347 268 146 28 chr18 11936491 11936812 -74740736 - L1ME4a LINE L1 -6 6115 5757 328 184 147 37 chr18 11937029 11937138 -74740410 + MIR SINE MIR 75 195 -67 349 174 14 14 chr18 11937303 11937372 -74740176 - Tigger5 DNA MER2_type 0 2323 2255 251 308 0 13 chr18 11937415 11937493 -74740055 - Tigger5 DNA MER2_type -2246 77 1 305 239 28 21 chr18 11937590 11937732 -74739816 - L1ME LINE L1 -5384 686 544 680 195 67 46 chr18 11937749 11937944 -74739604 - L1ME LINE L1 -5575 495 297 489 198 66 72 chr18 11937945 11938112 -74739436 - L1ME LINE L1 -5846 224 59 1731 178 95 60 chr18 11938329 11938813 -74738735 - MLT1D LTR MaLR -4 501 1 190 250 69 0 chr18 11939237 11939309 -74738239 - MIR SINE MIR -117 145 69 537 288 68 31 chr18 11940058 11940280 -74737268 + MIR SINE MIR 12 241 -21 2406 90 3 0 chr18 11940379 11940679 -74736869 - AluSx SINE Alu -11 301 1 427 294 78 21 chr18 11941306 11941505 -74736043 + MIR SINE MIR 7 219 -43 1779 174 3 0 chr18 11942210 11942497 -74735051 - AluJb SINE Alu -24 288 1 279 292 211 38 chr18 11942844 11943029 -74734519 + MIR SINE MIR 19 235 -27 485 223 15 68 chr18 11943047 11943120 -74734428 - MIR SINE MIR 0 262 187 2161 124 0 0 chr18 11943120 11943418 -74734130 - AluSx SINE Alu -14 298 1 485 223 15 68 chr18 11943418 11943536 -74734012 - MIR SINE MIR -75 187 1 266 210 16 0 chr18 11943577 11943639 -74733909 - HsTC2 DNA Tc2 -1831 67 5 2305 107 0 0 chr18 11943707 11944006 -74733542 - AluSg SINE Alu -11 299 1 2198 128 0 3 chr18 11944168 11944473 -74733075 - AluSx SINE Alu -8 304 1 281 173 39 0 chr18 11944776 11944828 -74732720 + MIR SINE MIR 117 170 -92 641 172 258 0 chr18 11945071 11945222 -74732326 - LTR40a LTR ERVL -2 517 328 1415 172 182 28 chr18 11945244 11945640 -74731908 + LTR2B LTR ERV1 34 490 0 279 238 40 10 chr18 11945759 11945860 -74731688 - LTR40a LTR ERVL -414 105 2 180 0 0 0 chr18 11946135 11946155 -74731393 + (T)n Simple_repeat Simple_repeat 1 20 0 378 316 81 15 chr18 11946234 11946370 -74731178 - MIR SINE MIR -71 191 47 330 209 85 54 chr18 11946827 11946956 -74730592 - L1ME4a LINE L1 -21 6100 5968 269 284 78 41 chr18 11947059 11947264 -74730284 - L1ME4a LINE L1 -296 5825 5606 2316 101 0 3 chr18 11947264 11947562 -74729986 + AluSp SINE Alu 1 297 -16 269 284 78 41 chr18 11947562 11947624 -74729924 - L1ME4a LINE L1 -515 5606 5548 2294 91 0 3 chr18 11948728 11949024 -74728524 - AluSc SINE Alu -14 295 1 278 282 169 8 chr18 11949244 11949368 -74728180 + MIR3 SINE MIR 1 144 -64 24 0 0 0 chr18 11950505 11950529 -74727019 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr18 11950839 11950864 -74726684 + (T)n Simple_repeat Simple_repeat 1 25 0 610 195 71 0 chr18 11952996 11953109 -74724439 + FLAM_A SINE Alu 3 123 -10 27 29 0 0 chr18 11955400 11955434 -74722114 + AT_rich Low_complexity Low_complexity 1 34 0 1648 160 13 26 chr18 11955508 11955814 -74721734 - AluJo SINE Alu -10 302 1 471 146 37 0 chr18 11956207 11956289 -74721259 - AluJo SINE Alu -7 305 221 754 142 15 8 chr18 11956312 11956446 -74721102 - AluJo SINE Alu -177 135 1 2271 81 0 37 chr18 11956451 11956773 -74720775 - AluY SINE Alu -1 310 1 21 36 0 0 chr18 11956816 11956844 -74720704 + AT_rich Low_complexity Low_complexity 1 28 0 422 303 54 25 chr18 11957500 11957741 -74719807 - L1M4 LINE L1 -3147 2999 2752 511 256 200 10 chr18 11958303 11958498 -74719050 - MIR SINE MIR 0 262 31 909 132 0 0 chr18 11958679 11958800 -74718748 + FLAM_C SINE Alu 2 122 -21 1135 300 123 46 chr18 11959029 11959477 -74718071 - L3 LINE CR1 -20 1557 1042 2149 113 0 28 chr18 11959477 11959797 -74717751 - AluY SINE Alu 0 311 1 1135 300 123 46 chr18 11959797 11960001 -74717547 - L3 LINE CR1 -535 1042 855 191 398 43 11 chr18 11960360 11960453 -74717095 - L3 LINE CR1 -1189 388 293 2141 109 0 11 chr18 11960981 11961266 -74716282 - AluSx SINE Alu -30 282 1 766 306 232 5 chr18 11961413 11961939 -74715609 - L2 LINE L2 -4 3309 2661 913 251 70 17 chr18 11961955 11962242 -74715306 - L2 LINE L2 -842 2472 2171 1971 157 94 15 chr18 11962962 11963364 -74714184 - Tigger2a DNA MER2_type 0 434 1 1833 182 7 0 chr18 11964620 11964916 -74712632 + AluJb SINE Alu 1 298 -14 220 379 78 0 chr18 11965847 11965963 -74711585 + MIR SINE MIR 90 214 -48 189 0 0 0 chr18 11966780 11966801 -74710747 + (T)n Simple_repeat Simple_repeat 1 21 0 1457 123 126 4 chr18 11967545 11967806 -74709742 + AluJo SINE Alu 1 293 -19 648 36 24 0 chr18 11968140 11968224 -74709324 + AluYa5/8 SINE Alu 216 301 -9 2039 104 58 12 chr18 12168732 12169059 -74508489 - Tigger1 DNA MER2_type -1580 838 497 1622 166 38 153 chr18 12169377 12169740 -74507808 - L1ME2 LINE L1 -13 6151 5748 1808 176 0 23 chr18 12169740 12170046 -74507502 - AluJo SINE Alu -13 299 1 1471 130 5 5 chr18 12170056 12170271 -74507277 - AluJb SINE Alu -17 295 81 1622 166 38 153 chr18 12170271 12170382 -74507166 - L1ME2 LINE L1 -426 5738 5616 1299 191 220 19 chr18 12170382 12170795 -74506753 - LTR54B LTR ERV1 -2 496 1 1622 166 38 153 chr18 12170795 12170825 -74506723 - L1ME2 LINE L1 -548 5616 5706 1590 216 108 24 chr18 12170825 12171251 -74506297 - LTR40b LTR ERVL 0 462 1 1622 166 38 153 chr18 12171251 12171316 -74506232 - L1ME2 LINE L1 -457 5707 5636 657 156 23 55 chr18 12171316 12171444 -74506104 + FRAM SINE Alu 24 147 -29 762 209 0 34 chr18 12171553 12171701 -74505847 + FRAM SINE Alu 8 150 -26 53 17 0 0 chr18 12171701 12171761 -74505787 + AT_rich Low_complexity Low_complexity 1 60 0 319 93 37 0 chr18 12171784 12171838 -74505710 - LTR54 LTR ERV1 -2 508 453 504 156 40 6 chr18 12171840 12172013 -74505535 + (TA)n Simple_repeat Simple_repeat 2 180 0 986 146 79 6 chr18 12172025 12172203 -74505345 + LTR47A LTR ERVL 262 452 0 1001 146 6 6 chr18 12172535 12172693 -74504855 + FRAM SINE Alu 1 158 -18 1608 188 75 86 chr18 12172710 12172791 -74504757 + LTR49-int LTR ERV1 1604 1684 -4647 1658 184 3 16 chr18 12172791 12173095 -74504453 - AluJo SINE Alu -7 305 6 1608 188 75 86 chr18 12173095 12173492 -74504056 + LTR49-int LTR ERV1 1684 2077 -4254 1381 198 146 44 chr18 12173514 12173995 -74503553 - LTR10B LTR ERV1 -5 542 13 1662 193 37 74 chr18 12173996 12174228 -74503320 + LTR49-int LTR ERV1 2054 2266 -4065 2097 168 91 5 chr18 12174228 12174626 -74502922 - MSTB1 LTR MaLR 0 432 1 1662 193 37 74 chr18 12174626 12174797 -74502751 + LTR49-int LTR ERV1 2266 2442 -3889 784 126 8 16 chr18 12174797 12174924 -74502624 - Tigger1 DNA MER2_type -2263 155 30 249 160 40 0 chr18 12175017 12175067 -74502481 - MLT1G1 LTR MaLR 0 595 544 219 195 117 26 chr18 12175172 12175249 -74502299 + L2 LINE L2 1751 1834 -1480 262 186 100 0 chr18 12175269 12175339 -74502209 - L1MC4 LINE L1 -2 8040 7964 4844 111 15 19 chr18 12175375 12175772 -74501776 + L1MA5A LINE L1 5553 5947 -350 807 163 0 8 chr18 12175772 12175901 -74501647 + FLAM_C SINE Alu 1 128 -5 4844 111 15 19 chr18 12175901 12176248 -74501300 + L1MA5A LINE L1 5947 6294 -3 659 95 76 0 chr18 12176272 12176377 -74501171 - Tigger1 DNA MER2_type -104 2314 2202 * 997 143 57 11 chr18 12176347 12176522 -74501026 - Tigger1 DNA MER2_type -2235 183 1 206 83 56 0 chr18 12176920 12176956 -74500592 + CT-rich Low_complexity Low_complexity 3 40 0 956 159 5 69 chr18 12176960 12177149 -74500399 - AluJb SINE Alu 0 312 136 21 36 0 0 chr18 12177549 12177577 -74499971 + AT_rich Low_complexity Low_complexity 1 28 0 2195 85 46 0 chr18 12177578 12177859 -74499689 - AluSq SINE Alu -19 294 1 497 320 15 15 chr18 12178306 12178503 -74499045 + HAL1 LINE L1 1567 1763 -744 1857 138 3 53 chr18 12178580 12178900 -74498648 + AluSx SINE Alu 1 304 -8 227 335 150 15 chr18 12179434 12179634 -74497914 + HAL1 LINE L1 2245 2471 -36 4835 140 33 39 chr18 12180198 12180757 -74496791 - L1MB3 LINE L1 -2 6181 5620 2052 122 7 0 chr18 12180757 12181043 -74496505 - AluSq SINE Alu -20 293 6 4835 140 33 39 chr18 12181043 12181275 -74496273 - L1MB3 LINE L1 -563 5620 5388 243 0 0 0 chr18 12181275 12181302 -74496246 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1855 126 54 0 chr18 12181305 12181566 -74495982 - AluSx SINE Alu -36 276 2 4835 140 33 39 chr18 12181566 12181763 -74495785 - L1MB3 LINE L1 -797 5386 5191 1470 132 5 5 chr18 12181797 12182010 -74495538 - AluJb SINE Alu -15 297 85 1787 112 0 53 chr18 12182193 12182478 -74495070 - AluSg SINE Alu -12 298 29 1511 192 20 31 chr18 12182519 12182811 -74494737 + AluJo SINE Alu 1 289 -23 2858 133 26 28 chr18 12183082 12183215 -74494333 - LTR24 LTR ERV1 -1 466 334 1826 169 0 13 chr18 12183215 12183522 -74494026 + AluJo SINE Alu 1 303 -9 2858 133 26 28 chr18 12183522 12183855 -74493693 - LTR24 LTR ERV1 -133 334 1 2068 119 33 3 chr18 12184850 12185153 -74492395 - AluSx SINE Alu 0 312 1 2279 102 3 0 chr18 12185164 12185459 -74492089 - AluSx SINE Alu -16 296 1 383 214 29 58 chr18 12185993 12186096 -74491452 - MER65A LTR ERV1 -345 100 1 2127 104 7 3 chr18 12186132 12186439 -74491109 - AluSx SINE Alu -4 308 1 1582 158 209 6 chr18 12187506 12187822 -74489726 - MSTB LTR MaLR 0 426 47 1996 152 0 0 chr18 12187832 12188135 -74489413 + AluJo SINE Alu 9 311 -1 2194 120 10 7 chr18 12188135 12188443 -74489105 + AluSx SINE Alu 1 310 -2 821 156 95 1 chr18 12188512 12188811 -74488737 + MER93b LTR ERV1 6 373 0 1242 168 18 5 chr18 12188966 12189186 -74488362 - Tigger4(Zombi) DNA MER2_type 0 2731 2509 * 1698 159 7 0 chr18 12189182 12189452 -74488096 - Tigger4(Zombi) DNA MER2_type -2459 272 1 1888 106 75 52 chr18 12189614 12189962 -74487586 + SVA Other Other 689 1044 -342 216 0 0 0 chr18 12189965 12189989 -74487559 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr18 12192131 12192153 -74485395 + AT_rich Low_complexity Low_complexity 1 22 0 951 196 0 18 chr18 12192158 12192326 -74485222 + FRAM SINE Alu 1 165 -1 2138 207 65 10 chr18 12192499 12192978 -74484570 + MLT1D LTR MaLR 1 505 0 363 136 0 0 chr18 12193509 12193568 -74483980 + (TTCC)n Simple_repeat Simple_repeat 2 60 0 2223 123 3 0 chr18 12193569 12193879 -74483669 - AluY SINE Alu 0 311 1 22 56 0 0 chr18 12193956 12193992 -74483556 + AT_rich Low_complexity Low_complexity 1 36 0 10480 122 3 18 chr18 12194020 12195648 -74481900 + HERVH LTR ERV1 2390 3993 -3720 3405 164 11 9 chr18 12195631 12196247 -74481301 + HERVH LTR ERV1 3995 5225 -1866 * 2653 145 8 40 chr18 12196247 12196722 -74480826 + HERVH LTR ERV1 6489 6948 -765 268 102 0 136 chr18 12196716 12196775 -74480773 + HERVH LTR ERV1 7663 7713 0 * 1644 95 26 0 chr18 12196776 12197007 -74480541 + HERVH LTR ERV1 7173 7409 -304 1874 183 147 30 chr18 12197007 12197498 -74480050 + LTR10A LTR ERV1 1 548 -61 2026 100 10 16 chr18 12197511 12197821 -74479727 + HERVH LTR ERV1 7406 7713 0 1552 182 106 45 chr18 12197821 12198245 -74479303 + LTR7 LTR ERV1 1 450 0 276 354 56 7 chr18 12198358 12198502 -74479046 - MIR SINE MIR -92 170 20 207 339 157 19 chr18 12198640 12198953 -74478595 - L2 LINE L2 -339 2975 2620 444 199 30 17 chr18 12199130 12199238 -74478310 - L1ME2 LINE L1 -1 6165 6064 2200 119 0 0 chr18 12200237 12200531 -74477017 + AluSg SINE Alu 1 294 -16 1616 173 77 0 chr18 12201004 12201276 -74476272 + AluJb SINE Alu 1 293 -19 1794 158 6 25 chr18 12202222 12202539 -74475009 + AluSx SINE Alu 1 311 -1 2156 118 6 10 chr18 12203715 12204028 -74473520 - AluSx SINE Alu 0 312 1 809 226 168 104 chr18 12204211 12204265 -74473283 - L1MC4a LINE L1 -1637 6171 6122 2225 115 0 0 chr18 12204265 12204560 -74472988 + AluSx SINE Alu 1 295 -17 809 226 168 104 chr18 12204560 12204900 -74472648 - L1MC4a LINE L1 -1686 6122 5805 2160 139 0 13 chr18 12204900 12205217 -74472331 + AluSq SINE Alu 1 313 0 809 226 168 104 chr18 12205217 12205649 -74471899 - L1MC4a LINE L1 -2003 5805 5291 283 269 30 19 chr18 12205838 12205990 -74471558 - L1 LINE L1 -1095 5051 4902 1664 181 10 20 chr18 12206699 12206991 -74470557 - AluJo SINE Alu -23 289 1 772 295 81 60 chr18 12207110 12207557 -74469991 + L1MEd LINE L1 532 987 -5385 2190 93 4 0 chr18 12208269 12208549 -74468999 + AluSp SINE Alu 1 281 -32 189 0 0 0 chr18 12208549 12208570 -74468978 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1936 176 3 0 chr18 12208795 12209102 -74468446 - AluJb SINE Alu -4 308 1 406 240 240 68 chr18 12209416 12209712 -74467836 + MLT1K LTR MaLR 224 570 -18 2047 220 92 18 chr18 12209712 12210740 -74466808 + L1MEd LINE L1 1709 2833 -3549 1364 147 85 6 chr18 12210798 12211077 -74466471 + MER33 DNA MER1_type 1 301 -23 593 243 96 23 chr18 12211902 12212120 -74465428 + MLT1J LTR MaLR 241 474 -37 2331 80 7 0 chr18 12212483 12212772 -74464776 - AluSx SINE Alu -21 291 1 271 260 112 49 chr18 12214256 12214479 -74463069 - L2 LINE L2 -28 3285 3049 1969 143 3 10 chr18 12214479 12214787 -74462761 + AluSx SINE Alu 1 306 -6 2398 72 0 10 chr18 12215866 12216171 -74461377 - AluSq SINE Alu -11 302 1 982 144 0 7 chr18 12216902 12217055 -74460493 - AluJb SINE Alu -7 305 154 701 129 0 0 chr18 12217063 12217164 -74460384 - LTR12 LTR ERV1 -133 581 481 374 182 30 20 chr18 12217165 12217264 -74460284 - LTR30 LTR ERV1 -79 643 544 1052 136 110 83 chr18 12217374 12217602 -74459946 - LTR12 LTR ERV1 -480 234 1 806 123 9 0 chr18 12217603 12217717 -74459831 - AluJb SINE Alu -163 149 35 1378 114 0 0 chr18 12221211 12221395 -74456153 - AluSg/x SINE Alu -14 295 112 2167 104 0 3 chr18 12221476 12221790 -74455758 + AluSq SINE Alu 1 313 0 222 105 0 0 chr18 12222191 12222229 -74455319 + (T)n Simple_repeat Simple_repeat 1 38 0 1984 149 0 0 chr18 12222423 12222712 -74454836 - AluSx SINE Alu -23 289 1 245 343 48 0 chr18 12223562 12223667 -74453881 + MER91C DNA MER1_type 1 110 -30 192 270 0 63 chr18 12227761 12227824 -74449724 + L2 LINE L2 3160 3218 -95 257 280 33 60 chr18 12228696 12228878 -74448670 - L1MC4a LINE L1 -1755 6053 5877 256 280 150 40 chr18 12229077 12229177 -74448371 - L2 LINE L2 0 3272 3162 2020 120 3 20 chr18 12229247 12229548 -74448000 + AluSx SINE Alu 1 296 -16 604 284 105 26 chr18 12231372 12232067 -74445481 - L1MC4a LINE L1 -410 5711 4960 558 312 114 10 chr18 12232125 12232423 -74445125 + L1ME4a LINE L1 5563 5891 -230 284 200 110 0 chr18 12232490 12232590 -74444958 + L1ME4a LINE L1 6007 6117 -4 14484 146 75 10 chr18 12232845 12235375 -74442173 + Tigger2 DNA MER2_type 26 2718 0 468 266 43 41 chr18 12236059 12236265 -74441283 + MIR SINE MIR 10 216 -46 1656 167 34 3 chr18 12237469 12237762 -74439786 - AluJo SINE Alu -1 311 10 309 237 21 31 chr18 12238077 12238174 -74439374 + L1ME LINE L1 5636 5731 -390 351 239 159 22 chr18 12238174 12238312 -74439236 + HAL1 LINE L1 37 193 -2314 738 223 129 16 chr18 12238314 12238507 -74439041 - MER58C DNA MER1_type 0 215 1 345 301 128 0 chr18 12238578 12238734 -74438814 + HAL1 LINE L1 271 446 -2061 183 305 99 107 chr18 12239037 12239168 -74438380 - L2 LINE L2 -2 3270 3141 318 273 94 101 chr18 12239260 12239666 -74437882 - L2 LINE L2 -785 2529 2127 432 219 68 68 chr18 12240016 12240162 -74437386 - MER69A DNA AcHobo -3 174 29 249 346 48 0 chr18 12240273 12240377 -74437171 + L2 LINE L2 3191 3299 -14 270 297 139 36 chr18 12241530 12241860 -74435688 + HAL1b LINE L1 438 801 -547 752 136 0 8 chr18 12241946 12242064 -74435484 + AluSq/x SINE Alu 1 117 -196 1264 49 6 12 chr18 12242069 12242233 -74435315 - AluY SINE Alu -17 294 132 254 182 130 13 chr18 12242878 12242955 -74434593 + L1P LINE L1 3187 3272 -2874 301 248 147 23 chr18 12243348 12243477 -74434071 + L1ME LINE L1 5461 5605 -516 441 226 170 0 chr18 12243766 12243872 -74433676 + FLAM_A SINE Alu 1 124 -9 1995 134 7 3 chr18 12244001 12244300 -74433248 + AluJb SINE Alu 1 300 -12 259 251 108 54 chr18 12244613 12244816 -74432732 - L1MC4 LINE L1 -3 8039 7826 407 168 42 84 chr18 12244889 12244952 -74432596 - L1ME2 LINE L1 -63 6101 6044 2158 120 0 3 chr18 12244952 12245253 -74432295 + AluSq SINE Alu 1 300 -13 407 168 42 84 chr18 12245253 12245308 -74432240 - L1ME2 LINE L1 -120 6044 5988 899 293 108 43 chr18 12245316 12246136 -74431412 + L1MC4 LINE L1 7168 8041 -1 821 223 40 90 chr18 12246148 12246471 -74431077 + L1MC5 LINE L1 6650 6956 -1005 9553 211 94 45 chr18 12246487 12248347 -74429201 - L1MA4A LINE L1 -4 7001 5233 180 0 0 0 chr18 12248347 12248367 -74429181 + (TTG)n Simple_repeat Simple_repeat 2 21 0 9553 211 94 45 chr18 12248367 12249459 -74428089 - L1MA4A LINE L1 -1772 5233 4195 2190 116 0 28 chr18 12249459 12249778 -74427770 - AluSx SINE Alu -2 310 1 9553 211 94 45 chr18 12249778 12250357 -74427191 - L1MA4A LINE L1 -2810 4195 3646 2243 98 7 0 chr18 12250357 12250654 -74426894 + AluY SINE Alu 2 300 -11 9553 211 94 45 chr18 12250654 12251658 -74425890 - L1MA4A LINE L1 -3359 3646 2692 1912 145 0 7 chr18 12251658 12251962 -74425586 - AluSx SINE Alu -10 302 1 9553 211 94 45 chr18 12251962 12253942 -74423606 - L1MA4A LINE L1 -4313 2692 12 1135 249 70 61 chr18 12253950 12254032 -74423516 + L1MC5 LINE L1 6952 7032 -929 413 282 120 0 chr18 12254032 12254149 -74423399 + FLAM_A SINE Alu 1 131 -2 1135 249 70 61 chr18 12254149 12254640 -74422908 + L1MC5 LINE L1 7032 7530 -431 425 260 89 72 chr18 12255361 12255596 -74421952 + HAL1 LINE L1 1114 1352 -1155 236 291 189 14 chr18 12255696 12255844 -74421704 + HAL1 LINE L1 1488 1661 -846 259 218 30 50 chr18 12255852 12255953 -74421595 + L1MC4a LINE L1 5950 6048 -1760 257 270 127 24 chr18 12256018 12256144 -74421404 + L1MC5 LINE L1 7714 7852 -109 246 325 120 0 chr18 12256264 12256381 -74421167 + L1ME LINE L1 5695 5825 -296 578 326 105 48 chr18 12256792 12257411 -74420137 + L2 LINE L2 1864 2517 -797 331 275 22 11 chr18 12257390 12257481 -74420067 - L2 LINE L2 -1 3312 3221 * 1997 134 0 10 chr18 12257650 12257948 -74419600 + AluJb SINE Alu 1 295 -17 368 181 14 14 chr18 12258921 12258993 -74418555 - MER5C DNA MER1_type -249 75 4 1868 84 42 39 chr18 12262665 12262950 -74414598 + AluSq SINE Alu 5 290 -23 248 259 86 0 chr18 12263001 12263082 -74414466 + HAL1 LINE L1 1562 1649 -858 693 211 0 0 chr18 12263169 12263292 -74414256 - FLAM_A SINE Alu -10 123 1 1670 163 0 36 chr18 12263976 12264282 -74413266 + AluJb SINE Alu 1 295 -17 285 291 47 23 chr18 12264731 12264817 -74412731 + MIR SINE MIR 6 93 -169 268 234 94 0 chr18 12265597 12265661 -74411887 - MIR SINE MIR -30 232 163 243 0 0 0 chr18 12265954 12265981 -74411567 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1625 156 11 7 chr18 12266019 12266295 -74411253 + AluJo SINE Alu 14 290 -22 390 200 33 53 chr18 12266431 12266581 -74410967 - L1MC5 LINE L1 -425 7536 7390 1865 104 59 4 chr18 12266591 12266896 -74410652 - AluSq SINE Alu 0 320 1 427 157 248 0 chr18 12267261 12267382 -74410166 - Tigger8 DNA MER2_type -183 483 333 191 179 0 0 chr18 12267884 12267912 -74409636 - MIR SINE MIR -17 245 218 614 135 42 0 chr18 12268458 12268554 -74408994 - HY3 scRNA scRNA 0 101 2 220 299 206 0 chr18 12268748 12268855 -74408693 + MIR SINE MIR 26 154 -108 616 140 0 0 chr18 12268918 12269018 -74408530 + HY3 scRNA scRNA 1 100 -1 201 338 66 72 chr18 12269161 12269245 -74408303 - L2 LINE L2 -699 2615 2532 1890 152 10 3 chr18 12269245 12269534 -74408014 + AluJo SINE Alu 1 291 -21 201 338 66 72 chr18 12269534 12269783 -74407765 - L2 LINE L2 -782 2532 2284 21 36 0 0 chr18 12269869 12269897 -74407651 + AT_rich Low_complexity Low_complexity 1 28 0 2253 113 3 0 chr18 12270320 12270622 -74406926 + AluSx SINE Alu 1 303 -9 22 0 0 0 chr18 12270626 12270648 -74406900 + AT_rich Low_complexity Low_complexity 1 22 0 887 145 8 0 chr18 12271492 12271623 -74405925 + AluJb SINE Alu 2 133 -179 198 191 0 0 chr18 12271813 12271860 -74405688 + (TA)n Simple_repeat Simple_repeat 2 48 0 3183 149 58 3 chr18 12271889 12272492 -74405056 - L1MA4 LINE L1 -9 6291 5656 1517 128 52 0 chr18 12272492 12272741 -74404807 + L1M1 LINE L1 5452 5713 -592 254 202 0 71 chr18 12273475 12273574 -74403974 + A-rich Low_complexity Low_complexity 2 93 0 222 256 26 0 chr18 12275117 12275195 -74402353 + A-rich Low_complexity Low_complexity 3 82 0 369 136 0 0 chr18 12277772 12277831 -74399717 - Charlie5 DNA MER1_type -28 2584 2526 24 0 0 0 chr18 12278474 12278498 -74399050 + AT_rich Low_complexity Low_complexity 1 24 0 337 295 44 6 chr18 12278581 12278724 -74398824 + MIR SINE MIR 63 217 -45 450 164 0 0 chr18 12279093 12279160 -74398388 + AluJ/FLAM SINE Alu 23 89 -223 209 313 144 19 chr18 12279576 12279832 -74397716 + L2 LINE L2 2177 2464 -850 393 181 138 43 chr18 12280102 12280240 -74397308 + MER103 DNA DNA 3 153 -13 297 24 24 0 chr18 12280453 12280494 -74397054 - MADE1 DNA Mariner -37 43 2 230 333 0 50 chr18 12280601 12280700 -74396848 + L2 LINE L2 2990 3083 -189 299 191 15 0 chr18 12280864 12280932 -74396616 - L1MC5 LINE L1 -518 7443 7375 206 0 0 65 chr18 12281247 12281278 -74396270 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1699 150 0 60 chr18 12281286 12281586 -74395962 - AluJo SINE Alu -30 282 1 2317 130 3 0 chr18 12281596 12281904 -74395644 - AluSg SINE Alu -1 309 1 369 232 89 0 chr18 12283343 12283455 -74394093 - Charlie4 DNA MER1_type -4 1957 1836 741 41 0 0 chr18 12283666 12283763 -74393785 + L1PA4 LINE L1 2 98 -6048 38790 42 7 3 chr18 12283764 12289590 -74387958 + L1PA4 LINE L1 317 6155 0 780 178 63 82 chr18 12289856 12289886 -74387662 - Charlie4 DNA MER1_type -1670 291 262 1752 149 23 55 chr18 12289886 12290067 -74387481 - AluJb SINE Alu -13 299 131 1932 87 65 7 chr18 12290067 12290342 -74387206 + AluY SINE Alu 2 292 -19 1752 149 23 55 chr18 12290342 12290469 -74387079 - AluJb SINE Alu -181 131 1 780 178 63 82 chr18 12290469 12290708 -74386840 - Charlie4 DNA MER1_type -1699 262 27 2304 108 3 0 chr18 12291092 12291397 -74386151 + AluSx SINE Alu 1 306 -6 1447 193 27 0 chr18 12292237 12292538 -74385010 + L1MB7 LINE L1 5433 5741 -437 300 132 19 0 chr18 12292538 12292591 -74384957 - MER34 LTR ERV1 0 542 489 270 259 0 0 chr18 12292597 12292651 -74384897 - AluJ/monomer SINE Alu -247 54 1 1137 232 61 35 chr18 12292688 12293097 -74384451 - MER34 LTR ERV1 -72 635 1 1744 158 53 42 chr18 12293099 12293479 -74384069 + L1MB7 LINE L1 5740 6123 -61 1517 173 11 29 chr18 12293713 12293991 -74383557 + AluJo SINE Alu 1 273 -39 1699 178 7 30 chr18 12293994 12294292 -74383256 + AluJb SINE Alu 1 291 -21 22 35 0 0 chr18 12295031 12295060 -74382488 + AT_rich Low_complexity Low_complexity 1 29 0 201 296 0 19 chr18 12295165 12295219 -74382329 + MIR3 SINE MIR 108 160 -48 2060 132 7 0 chr18 12295248 12295544 -74382004 + AluJb SINE Alu 5 302 -10 912 156 0 36 chr18 12295962 12296129 -74381419 + AluJo SINE Alu 118 278 -34 2678 39 3 0 chr18 12296129 12296438 -74381110 - AluY SINE Alu -1 310 1 22 35 0 0 chr18 12296463 12296492 -74381056 + AT_rich Low_complexity Low_complexity 1 29 0 454 208 30 0 chr18 12296790 12296891 -74380657 + U13 snRNA snRNA 1 104 0 2041 109 46 0 chr18 12297328 12297612 -74379936 + AluSg SINE Alu 1 297 -13 436 305 162 5 chr18 12297689 12297886 -74379662 - MIR SINE MIR -17 245 18 2288 123 12 0 chr18 12298902 12299235 -74378313 - MER1B DNA MER1_type 0 337 1 2115 130 0 0 chr18 12299318 12299618 -74377930 + AluSx SINE Alu 1 300 -12 1020 111 111 5 chr18 12302740 12302938 -74374610 - Tigger1 DNA MER2_type 0 2418 2200 816 144 7 7 chr18 12302934 12303073 -74374475 - Tigger1 DNA MER2_type -2279 139 1 * 23 0 0 0 chr18 12303333 12303356 -74374192 + AT_rich Low_complexity Low_complexity 1 23 0 2552 51 0 10 chr18 12303736 12304049 -74373499 + AluY SINE Alu 1 310 -1 1539 109 24 0 chr18 12304051 12304262 -74373286 + AluSq SINE Alu 92 307 -6 2950 207 81 13 chr18 12304364 12304903 -74372645 - L1ME2 LINE L1 -16 6148 5528 2250 109 13 16 chr18 12304903 12305216 -74372332 + AluSx SINE Alu 1 312 0 2950 207 81 13 chr18 12305216 12305582 -74371966 - L1ME2 LINE L1 -636 5528 5188 3096 167 80 116 chr18 12306113 12306363 -74371185 - Charlie1a DNA MER1_type -1309 1452 1195 2462 49 0 16 chr18 12306363 12306667 -74370881 - AluY SINE Alu -12 299 1 3096 167 80 116 chr18 12306667 12307385 -74370163 - Charlie1a DNA MER1_type -1566 1195 535 2023 86 0 86 chr18 12307385 12307709 -74369839 - AluSg SINE Alu -14 296 1 3096 167 80 116 chr18 12307709 12307962 -74369586 - Charlie1a DNA MER1_type -2226 535 274 2250 107 7 0 chr18 12307979 12308279 -74369269 + AluSp SINE Alu 1 302 -11 772 189 78 0 chr18 12308296 12308449 -74369099 - FRAM SINE Alu -17 159 1 264 30 0 0 chr18 12308454 12308487 -74369061 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 536 230 72 13 chr18 12308497 12308649 -74368899 - Charlie1a DNA MER1_type -1194 261 101 867 173 0 42 chr18 12308982 12309150 -74368398 - FRAM SINE Alu 0 40 1 202 289 164 19 chr18 12309151 12309255 -74368293 - L3 LINE CR1 -159 1418 1300 4638 135 65 24 chr18 12309558 12310014 -74367534 + MER4D LTR ERV1 1 437 -466 2226 94 3 17 chr18 12310014 12310311 -74367237 + AluSq SINE Alu 1 293 -20 2308 110 3 0 chr18 12310311 12310619 -74366929 + AluSc SINE Alu 1 309 0 4638 135 65 24 chr18 12310619 12311029 -74366519 + MER4D LTR ERV1 436 903 0 307 258 214 0 chr18 12311050 12311139 -74366409 - L2 LINE L2 -5 3308 3201 486 234 8 16 chr18 12311155 12311283 -74366265 + MER94 DNA DNA 3 129 -5 687 299 150 30 chr18 12311289 12311623 -74365925 + MER115 DNA AcHobo 10 383 -310 3737 131 37 58 chr18 12312004 12312392 -74365156 + LTR8A LTR ERV1 1 367 -360 2078 120 0 20 chr18 12312392 12312691 -74364857 - AluSx SINE Alu -19 293 1 3737 131 37 58 chr18 12312691 12313040 -74364508 + LTR8A LTR ERV1 367 722 -5 28 71 0 0 chr18 12313307 12313363 -74364185 + AT_rich Low_complexity Low_complexity 1 56 0 2437 95 3 0 chr18 12313580 12313885 -74363663 + AluSp SINE Alu 1 306 -7 1843 171 0 7 chr18 12313987 12314270 -74363278 + AluJb SINE Alu 1 283 -29 468 0 0 0 chr18 12314270 12314322 -74363226 + (CA)n Simple_repeat Simple_repeat 1 52 0 1843 171 0 7 chr18 12314322 12314337 -74363211 + AluJb SINE Alu 283 297 -15 302 289 83 23 chr18 12314353 12314571 -74362977 + HAL1 LINE L1 1316 1546 -961 2367 99 3 3 chr18 12314582 12314894 -74362654 + AluSx SINE Alu 1 312 0 1058 147 27 58 chr18 12314944 12315169 -74362379 - MIR SINE MIR -40 222 5 618 229 51 0 chr18 12315273 12315391 -74362157 + FLAM_A SINE Alu 2 125 -8 236 125 0 0 chr18 12315412 12315452 -74362096 - MLT1E3 LTR MaLR -23 631 592 832 220 43 43 chr18 12315488 12315743 -74361805 + pTR5 LTR ERV1 743 997 -1441 1070 213 25 14 chr18 12315817 12316174 -74361374 + pTR5 LTR ERV1 984 1344 -1094 4729 102 18 138 chr18 12316194 12317128 -74360420 + LTR12 LTR ERV1 5 826 0 1771 136 4 39 chr18 12317128 12317408 -74360140 + AluJb SINE Alu 31 300 -12 936 208 185 57 chr18 12317411 12317909 -74359639 - MLT1E3 LTR MaLR -80 544 1 1250 126 177 28 chr18 12318436 12318690 -74358858 + AluY SINE Alu 1 292 -9 1717 185 20 0 chr18 12318800 12319098 -74358450 - AluSq SINE Alu -9 304 1 409 268 49 58 chr18 12319235 12319440 -74358108 + HAL1b LINE L1 908 1110 -238 1934 156 30 0 chr18 12319455 12319750 -74357798 + AluJb SINE Alu 1 304 -8 228 336 39 0 chr18 12319985 12320089 -74357459 - MLT1J LTR MaLR -294 217 110 360 59 0 0 chr18 12320188 12320239 -74357309 + (CA)n Simple_repeat Simple_repeat 2 52 0 239 211 53 0 chr18 12320333 12320390 -74357158 - L1ME LINE L1 -323 5798 5739 1757 184 0 17 chr18 12320407 12320700 -74356848 - AluJo SINE Alu -24 288 1 876 170 27 0 chr18 12320727 12320874 -74356674 + AluJb SINE Alu 1 151 -161 739 210 51 44 chr18 12320905 12321200 -74356348 + L1MEc LINE L1 1018 1314 -5082 245 200 31 0 chr18 12321197 12321262 -74356286 + L1MEc LINE L1 1579 1645 -4751 * 609 222 11 22 chr18 12321343 12321528 -74356020 + L1MEc LINE L1 1894 2076 -4320 655 244 6 0 chr18 12321768 12321944 -74355604 + L1PBa LINE L1 21 197 -6666 466 259 131 37 chr18 12321962 12322181 -74355367 - L1MEc LINE L1 -3917 2300 2086 1194 125 10 14 chr18 12322182 12322390 -74355158 - L1PB1 LINE L1 -1 6150 5944 5180 136 26 4 chr18 12322396 12323335 -74354213 + L1PBa LINE L1 1428 2386 -4477 2635 125 87 57 chr18 12323357 12323886 -74353662 - LTR10A LTR ERV1 -64 545 1 9402 210 6 5 chr18 12323904 12324079 -74353469 + L1PBa LINE L1 2460 2633 -4229 2233 85 0 7 chr18 12324079 12324398 -74353150 + AluSg SINE Alu 1 317 0 9402 210 6 5 chr18 12324398 12326682 -74350866 + L1PBa LINE L1 2633 4897 -1965 1859 122 4 0 chr18 12326689 12326944 -74350604 - AluSx SINE Alu -56 256 1 1828 112 3 33 chr18 12326946 12327250 -74350298 + L1PB1 LINE L1 5856 6150 -1 1671 242 0 0 chr18 12327260 12327523 -74350025 + L1MEc LINE L1 2093 2393 -3822 4670 161 21 33 chr18 12327523 12327919 -74349629 + L1MC1 LINE L1 5430 5829 -504 2236 106 0 7 chr18 12327919 12328212 -74349336 + AluSg SINE Alu 1 291 -19 4670 161 21 33 chr18 12328212 12328708 -74348840 + L1MC1 LINE L1 5829 6313 -20 2223 95 3 0 chr18 12328708 12329004 -74348544 - AluY SINE Alu -10 301 5 4670 161 21 33 chr18 12329004 12329025 -74348523 + L1MC1 LINE L1 6313 6333 0 1671 242 0 0 chr18 12329025 12329312 -74348236 + L1MEc LINE L1 2393 2609 -3606 2199 129 10 0 chr18 12329312 12329614 -74347934 - AluSx SINE Alu -7 305 1 1671 242 0 0 chr18 12329614 12329790 -74347758 + L1MEc LINE L1 2609 2809 -3406 2495 64 0 0 chr18 12329797 12330094 -74347454 - AluY SINE Alu -14 297 1 1337 103 0 22 chr18 12330351 12330535 -74347013 - AluSg/x SINE Alu -7 305 126 22 0 0 0 chr18 12330539 12330561 -74346987 + AT_rich Low_complexity Low_complexity 1 22 0 591 128 21 0 chr18 12330561 12330655 -74346893 + AluJ/FLAM SINE Alu 1 96 -216 1175 160 0 16 chr18 12330655 12330843 -74346705 + AluJb SINE Alu 59 243 -69 2016 139 0 23 chr18 12330962 12331265 -74346283 - AluJo SINE Alu -16 296 1 415 231 105 28 chr18 12331555 12331802 -74345746 + L1MC5 LINE L1 7642 7907 -54 903 194 0 11 chr18 12332274 12332449 -74345099 + MLT1F1 LTR MaLR 395 567 0 934 173 32 0 chr18 12333096 12333252 -74344296 - FRAM SINE Alu -5 161 1 30 59 0 0 chr18 12333536 12333587 -74343961 + AT_rich Low_complexity Low_complexity 1 51 0 2256 76 7 3 chr18 12333768 12334070 -74343478 - AluSx SINE Alu -9 303 1 2203 89 7 0 chr18 12334811 12335093 -74342455 - AluSp SINE Alu -29 284 1 2268 97 3 0 chr18 12335738 12336038 -74341510 - AluSg SINE Alu -9 301 1 198 0 0 0 chr18 12336647 12336669 -74340879 + (T)n Simple_repeat Simple_repeat 1 22 0 2749 233 145 19 chr18 12336700 12336950 -74340598 + L1MC4 LINE L1 6744 6961 -1081 1734 155 4 4 chr18 12336950 12337214 -74340334 + AluJo SINE Alu 1 264 -48 189 0 0 0 chr18 12337220 12337241 -74340307 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2749 233 145 19 chr18 12337241 12338008 -74339540 + L1MC4 LINE L1 6965 7898 -144 222 191 0 0 chr18 12338020 12338067 -74339481 + (TG)n Simple_repeat Simple_repeat 2 48 0 277 180 72 36 chr18 12338090 12338115 -74339433 + L1MC4 LINE L1 7926 7949 -93 4382 108 31 23 chr18 12338115 12338852 -74338696 - L1MA5A LINE L1 -2 6295 5553 277 180 72 36 chr18 12338852 12338937 -74338611 + L1MC4 LINE L1 7949 8040 -2 1765 191 0 10 chr18 12338956 12339254 -74338294 + AluJo SINE Alu 1 295 -17 333 152 38 51 chr18 12339274 12339353 -74338195 - L2 LINE L2 -1477 1837 1760 712 241 6 0 chr18 12339368 12339542 -74338006 + MLT1G1 LTR MaLR 421 595 0 8169 129 24 41 chr18 12339576 12341075 -74336473 + Tigger1 DNA MER2_type 2 1475 -943 1242 128 32 9 chr18 12341074 12341292 -74336256 + Tigger1 DNA MER2_type 99 321 -2097 * 3949 108 11 9 chr18 12341292 12341784 -74335764 + Tigger1 DNA MER2_type 1465 1960 -458 1743 195 0 7 chr18 12341784 12342087 -74335461 - AluJo SINE Alu -11 301 1 3949 108 11 9 chr18 12342087 12342224 -74335324 + Tigger1 DNA MER2_type 1960 2095 -323 754 182 0 23 chr18 12342224 12342356 -74335192 + FLAM_C SINE Alu 7 135 -8 2452 75 0 3 chr18 12342356 12342664 -74334884 + AluY SINE Alu 1 307 -4 1879 146 15 6 chr18 12342665 12342995 -74334553 + Tigger1 DNA MER2_type 2085 2417 -1 314 328 61 41 chr18 12343279 12343438 -74334110 - MIR3 SINE MIR -43 165 4 2325 81 3 0 chr18 12343541 12343875 -74333673 + AluSp SINE Alu 1 335 0 675 217 8 0 chr18 12343963 12344092 -74333456 + FLAM_A SINE Alu 1 130 -3 635 254 100 60 chr18 12344577 12345029 -74332519 + L1MC5 LINE L1 7292 7777 -184 2213 116 7 16 chr18 12345029 12345332 -74332216 - AluSq SINE Alu -13 300 1 635 254 100 60 chr18 12345332 12345498 -74332050 + L1MC5 LINE L1 7777 7935 -26 443 324 29 0 chr18 12345714 12345924 -74331624 - HAL1 LINE L1 -697 1810 1595 585 276 34 47 chr18 12345962 12346259 -74331289 - HAL1 LINE L1 -984 1523 1231 1834 137 27 7 chr18 12346348 12346640 -74330908 - AluSq SINE Alu -15 298 1 2194 99 17 0 chr18 12346640 12346931 -74330617 - AluSx SINE Alu -15 297 1 2887 9 0 3 chr18 12347092 12347411 -74330137 - AluYb8 SINE Alu 0 318 1 2294 104 0 3 chr18 12347871 12348170 -74329378 + AluSx SINE Alu 1 298 -14 622 344 62 3 chr18 12348437 12348760 -74328788 + L2 LINE L2 2272 2613 -701 345 316 61 50 chr18 12348794 12349072 -74328476 + L2 LINE L2 504 784 -2530 972 297 77 28 chr18 12349079 12349326 -74328222 + L2 LINE L2 2457 2735 -579 2336 117 3 0 chr18 12349326 12349634 -74327914 + AluSg SINE Alu 1 309 -1 972 297 77 28 chr18 12349634 12349817 -74327731 + L2 LINE L2 2735 2908 -406 2063 125 23 7 chr18 12349983 12350288 -74327260 - AluSx SINE Alu -2 310 1 2217 114 3 0 chr18 12350288 12350578 -74326970 - AluSx SINE Alu -21 291 1 351 287 60 0 chr18 12350890 12351040 -74326508 + L1ME3A LINE L1 6012 6170 0 536 165 43 9 chr18 12351369 12351484 -74326064 + Charlie1 DNA MER1_type 2310 2428 -333 257 105 0 88 chr18 12351481 12351538 -74326010 + Charlie1 DNA MER1_type 2710 2761 0 * 680 237 80 44 chr18 12352413 12352662 -74324886 + MIR SINE MIR 5 262 0 408 219 29 0 chr18 12352928 12353033 -74324515 + L1M4 LINE L1 4513 4620 -1526 4757 102 26 14 chr18 12353145 12353909 -74323639 - L1PA13 LINE L1 -8 6155 5383 1250 159 5 45 chr18 12353910 12354130 -74323418 - AluJb SINE Alu -101 211 1 2429 187 0 4 chr18 12354130 12354617 -74322931 - L1PA13 LINE L1 -1584 4562 4078 1481 180 17 92 chr18 12354616 12354814 -74322734 - L1MCa LINE L1 -870 5556 5345 * 2073 105 4 4 chr18 12354814 12355091 -74322457 + AluJb SINE Alu 14 290 -22 1481 180 17 92 chr18 12355091 12355301 -74322247 - L1MCa LINE L1 -1081 5345 5185 2473 73 0 10 chr18 12355301 12355615 -74321933 + AluSx SINE Alu 1 311 -1 1481 180 17 92 chr18 12355615 12355672 -74321876 - L1MCa LINE L1 -1241 5185 5125 1608 159 3 69 chr18 12355672 12355969 -74321579 + MER2 DNA MER2_type 1 271 -74 1845 158 34 3 chr18 12355969 12356261 -74321287 - AluJb SINE Alu -11 301 1 1608 159 3 69 chr18 12356261 12356327 -74321221 + MER2 DNA MER2_type 271 340 -5 8965 201 44 42 chr18 12356333 12356604 -74320944 - L1MCa LINE L1 -1301 5125 4856 2065 125 3 7 chr18 12356604 12356900 -74320648 + AluSx SINE Alu 1 295 -17 8965 201 44 42 chr18 12356900 12357633 -74319915 - L1MCa LINE L1 -1570 4856 4126 2470 74 0 0 chr18 12357633 12357930 -74319618 - AluY SINE Alu -9 302 6 8965 201 44 42 chr18 12357930 12359260 -74318288 - L1MCa LINE L1 -2300 4126 2800 1824 156 40 23 chr18 12359260 12359562 -74317986 - AluSx SINE Alu -5 307 1 8965 201 44 42 chr18 12359562 12360303 -74317245 - L1MCa LINE L1 -3626 2800 2043 1520 170 88 19 chr18 12360303 12360433 -74317115 + MER44D DNA MER2_type 1 121 -2370 185 0 0 39 chr18 12360433 12360459 -74317089 + (TTTTA)n Simple_repeat Simple_repeat 4 28 0 1520 170 88 19 chr18 12360459 12360645 -74316903 + MER44D DNA MER2_type 121 609 0 8965 201 44 42 chr18 12360645 12360752 -74316796 - L1MCa LINE L1 -4383 2043 1938 2225 90 20 3 chr18 12360756 12361057 -74316491 + AluSg SINE Alu 1 306 -4 2377 91 0 3 chr18 12361226 12361524 -74316024 + AluSg SINE Alu 1 297 -13 1109 150 15 46 chr18 12362435 12362490 -74315058 + L1MA8 LINE L1 5030 5085 -1061 2354 99 0 0 chr18 12362490 12362783 -74314765 - AluSc SINE Alu -16 293 1 1109 150 15 46 chr18 12362783 12362987 -74314561 + L1MA8 LINE L1 5085 5281 -865 245 196 5 4 chr18 12362990 12363194 -74314354 + AluJo SINE Alu 1 295 -7 2169 101 81 157 chr18 12363194 12363257 -74314291 + L1MA8 LINE L1 5274 5340 -951 2165 112 3 0 chr18 12363257 12363542 -74314006 + AluSg SINE Alu 3 288 -22 2169 101 81 157 chr18 12363542 12363657 -74313891 + L1MA8 LINE L1 5340 5462 -829 2004 154 3 10 chr18 12363657 12363861 -74313687 - AluSx SINE Alu 0 312 135 2367 92 0 0 chr18 12363861 12364155 -74313393 - AluSx SINE Alu -18 294 1 2004 154 3 10 chr18 12364155 12364290 -74313258 - AluSx SINE Alu -177 135 1 2169 101 81 157 chr18 12364290 12364320 -74313228 + L1MA8 LINE L1 5462 5493 -798 2057 130 0 7 chr18 12364320 12364629 -74312919 + AluSg1 SINE Alu 1 307 0 2169 101 81 157 chr18 12364629 12365023 -74312525 + L1MA8 LINE L1 5493 5833 -458 1620 152 10 1 chr18 12365023 12365304 -74312244 - MER1B DNA MER1_type 0 329 12 2488 111 63 14 chr18 12365304 12365589 -74311959 + L1MA8 LINE L1 5823 6139 -152 1724 159 71 0 chr18 12365589 12365872 -74311676 + AluJb SINE Alu 1 303 -9 2488 111 63 14 chr18 12365872 12366027 -74311521 + L1MA8 LINE L1 6139 6285 -6 1920 157 0 16 chr18 12366796 12367102 -74310446 - AluJo SINE Alu -11 301 1 1733 167 26 32 chr18 12367114 12367426 -74310122 - AluJb SINE Alu 0 312 3 23 0 0 0 chr18 12367468 12367491 -74310057 + AT_rich Low_complexity Low_complexity 1 23 0 1763 175 3 7 chr18 12367491 12367776 -74309772 - AluJo SINE Alu -22 290 7 272 221 2 104 chr18 12367934 12368000 -74309548 + L1MC5 LINE L1 7114 7129 -832 2082 139 0 3 chr18 12368000 12368310 -74309238 - AluSx SINE Alu -3 309 1 272 221 2 104 chr18 12368310 12368392 -74309156 + L1MC5 LINE L1 7129 7218 -743 534 251 30 67 chr18 12368519 12368890 -74308658 + L1MC5 LINE L1 7303 7659 -302 2045 139 0 7 chr18 12368893 12369203 -74308345 + AluSx SINE Alu 1 308 -4 239 203 14 0 chr18 12370161 12370235 -74307313 + (CA)n Simple_repeat Simple_repeat 2 76 0 2081 127 0 0 chr18 12370313 12370604 -74306944 + AluJb SINE Alu 1 291 -21 813 281 111 59 chr18 12370972 12371705 -74305843 + HAL1 LINE L1 408 1178 -1329 493 229 134 22 chr18 12371846 12372077 -74305471 + HAL1 LINE L1 2244 2500 -7 1592 252 138 4 chr18 12373302 12373779 -74303769 + MLT1H LTR MaLR 1 541 -8 387 310 183 18 chr18 12374007 12374281 -74303267 - L3 LINE CR1 -15 1562 1244 180 0 0 0 chr18 12375829 12375849 -74301699 + (T)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr18 12375889 12375918 -74301630 + AT_rich Low_complexity Low_complexity 1 29 0 1224 156 53 4 chr18 12375954 12376179 -74301369 - MER46A DNA MER2_type 0 236 1 2382 74 0 3 chr18 12377565 12377863 -74299685 + AluY SINE Alu 1 297 -14 201 274 167 0 chr18 12378527 12378611 -74298937 - MIR SINE MIR -38 224 127 23 68 0 0 chr18 12378702 12378746 -74298802 + AT_rich Low_complexity Low_complexity 1 44 0 2088 158 6 11 chr18 12379553 12379902 -74297646 - MER7A DNA MER2_type 0 346 2 2428 176 15 21 chr18 12380355 12380873 -74296675 + L1ME1 LINE L1 5616 6130 -36 2096 147 0 3 chr18 12380875 12381188 -74296360 + AluSx SINE Alu 1 312 0 290 259 17 52 chr18 12381457 12381573 -74295975 + L1ME4a LINE L1 5960 6071 -50 21 71 0 0 chr18 12381581 12381623 -74295925 + AT_rich Low_complexity Low_complexity 1 42 0 207 0 0 0 chr18 12381873 12381896 -74295652 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 356 245 49 21 chr18 12382271 12382414 -74295134 + L1MC5 LINE L1 7761 7907 -54 2475 72 0 0 chr18 12382668 12382961 -74294587 - AluSg SINE Alu -17 293 1 332 272 49 82 chr18 12384732 12385159 -74292389 + HAL1 LINE L1 764 1176 -1331 1049 172 30 19 chr18 12385167 12385434 -74292114 + L1MB7 LINE L1 4333 4602 -1544 5695 142 16 58 chr18 12385446 12386051 -74291497 + L1MC2 LINE L1 5101 5621 -723 1199 234 55 4 chr18 12386051 12386325 -74291223 - AluJo SINE Alu -13 289 2 5695 142 16 58 chr18 12386325 12387016 -74290532 + L1MC2 LINE L1 5621 6339 -5 1882 172 112 111 chr18 12387015 12387359 -74290189 + L1MB7 LINE L1 4598 4940 -1229 * 513 217 0 0 chr18 12387359 12387451 -74290097 - FRAM SINE Alu -84 92 1 1882 172 112 111 chr18 12387451 12387762 -74289786 + L1MB7 LINE L1 4940 5343 -826 1775 156 0 40 chr18 12387762 12388063 -74289485 + AluJo SINE Alu 1 289 -23 1882 172 112 111 chr18 12388063 12388082 -74289466 + L1MB7 LINE L1 5343 5360 -809 1185 155 0 11 chr18 12388108 12388289 -74289259 + AluJb SINE Alu 119 297 -15 309 51 0 0 chr18 12388290 12388329 -74289219 + (CA)n Simple_repeat Simple_repeat 2 40 0 1356 161 93 7 chr18 12388335 12388614 -74288934 + L1MB7 LINE L1 5373 5675 -509 1335 181 13 34 chr18 12388629 12388867 -74288681 + AluJo SINE Alu 15 247 -65 2136 183 69 8 chr18 12388926 12389418 -74288130 + L1MB7 LINE L1 5663 6184 0 459 120 26 0 chr18 12389482 12389610 -74287938 + (TA)n Simple_repeat Simple_repeat 1 131 0 1367 263 74 8 chr18 12389661 12390185 -74287363 + HAL1 LINE L1 1338 1896 -611 357 197 33 41 chr18 12390251 12390373 -74287175 + HAL1 LINE L1 2030 2150 -357 1074 222 99 0 chr18 12390466 12390687 -74286861 - MIR SINE MIR -16 246 4 254 100 0 0 chr18 12390694 12390734 -74286814 + HAL1b LINE L1 762 801 -547 31 26 0 0 chr18 12390997 12391035 -74286513 + AT_rich Low_complexity Low_complexity 1 38 0 362 241 5 91 chr18 12391187 12391374 -74286174 + HAL1 LINE L1 2225 2395 -112 21 0 0 0 chr18 12391433 12391454 -74286094 + AT_rich Low_complexity Low_complexity 1 21 0 198 274 20 0 chr18 12391516 12391567 -74285981 - MIR3 SINE MIR -23 185 134 654 188 23 0 chr18 12391573 12391706 -74285842 + MLT1G1 LTR MaLR 1 136 -459 284 203 27 27 chr18 12391755 12391829 -74285719 + GA-rich Low_complexity Low_complexity 6 79 0 826 222 25 0 chr18 12391895 12392093 -74285455 - MER3 DNA MER1_type -6 203 1 657 199 62 12 chr18 12392106 12392267 -74285281 + MLT1G1 LTR MaLR 427 595 0 2603 62 0 0 chr18 12392423 12392732 -74284816 - AluY SINE Alu -2 309 1 1337 103 0 22 chr18 12392989 12393173 -74284375 - AluSg/x SINE Alu -7 303 124 22 0 0 0 chr18 12393177 12393199 -74284349 + AT_rich Low_complexity Low_complexity 1 22 0 591 128 21 0 chr18 12393199 12393293 -74284255 + AluJ/FLAM SINE Alu 1 96 -216 1175 160 0 16 chr18 12393293 12393481 -74284067 + AluJb SINE Alu 59 243 -69 2016 139 0 23 chr18 12393600 12393903 -74283645 - AluJo SINE Alu -16 296 1 415 231 105 28 chr18 12394193 12394440 -74283108 + L1MC5 LINE L1 7642 7907 -54 903 194 0 11 chr18 12394912 12395087 -74282461 + MLT1F1 LTR MaLR 395 567 0 934 173 32 0 chr18 12395734 12395890 -74281658 - FRAM SINE Alu -5 161 1 30 59 0 0 chr18 12396174 12396225 -74281323 + AT_rich Low_complexity Low_complexity 1 51 0 2382 66 3 0 chr18 12396406 12396708 -74280840 - AluSx SINE Alu -9 303 1 440 308 112 77 chr18 12397604 12398431 -74279117 + L1M2 LINE L1 248 1270 -5579 251 317 0 0 chr18 12398696 12398756 -74278792 + MER5A DNA MER1_type 63 122 -67 1803 144 17 7 chr18 12398974 12399272 -74278276 - AluJo SINE Alu -11 301 1 1606 204 128 7 chr18 12399669 12400130 -74277418 - Charlie1b DNA MER1_type 0 523 7 2090 125 0 3 chr18 12400215 12400518 -74277030 - AluSg SINE Alu -6 304 3 1691 159 69 112 chr18 12400992 12401047 -74276501 - MLT1D LTR MaLR -17 488 432 1745 173 0 11 chr18 12401047 12401364 -74276184 + AluJb SINE Alu 5 318 0 1691 159 69 112 chr18 12401364 12401815 -74275733 - MLT1D LTR MaLR -73 432 3 21 36 0 0 chr18 12402817 12402845 -74274703 + AT_rich Low_complexity Low_complexity 1 28 0 14564 121 29 22 chr18 12403097 12404317 -74273231 - Tigger1 DNA MER2_type -4 2414 1167 1737 196 0 13 chr18 12404317 12404629 -74272919 - AluJo SINE Alu -4 308 1 14564 121 29 22 chr18 12404629 12405805 -74271743 - Tigger1 DNA MER2_type -1251 1167 1 317 217 14 0 chr18 12406027 12406096 -74271452 + L2 LINE L2 3203 3272 0 2632 147 4 52 chr18 12406708 12407232 -74270316 - L1MB5 LINE L1 -13 6161 5663 2127 160 66 18 chr18 12407237 12407533 -74270015 - L1MA8 LINE L1 0 6291 5960 2232 111 0 7 chr18 12407533 12407839 -74269709 - AluSx SINE Alu -4 308 5 2127 160 66 18 chr18 12407839 12408041 -74269507 - L1MA8 LINE L1 -331 5960 5769 1900 163 3 13 chr18 12408047 12408354 -74269194 - AluJo SINE Alu 0 312 9 529 175 78 0 chr18 12408365 12408468 -74269080 - FAM SINE Alu -2 183 73 318 85 0 0 chr18 12408471 12408518 -74269030 - L1MA8 LINE L1 -850 5462 5416 1148 161 18 14 chr18 12408518 12408741 -74268807 - L1MB5 LINE L1 -498 5676 5453 776 202 96 6 chr18 12409131 12409309 -74268239 + MIR SINE MIR 63 256 -6 1360 290 143 37 chr18 12409366 12410313 -74267235 - L2 LINE L2 -106 3207 2101 183 309 41 0 chr18 12411073 12411170 -74266378 - MIR3 SINE MIR -18 190 90 3061 124 17 4 chr18 12411288 12411749 -74265799 - LTR24 LTR ERV1 0 467 1 183 115 0 0 chr18 12412136 12412162 -74265386 + L2 LINE L2 3264 3289 -24 630 227 208 102 chr18 12412386 12412767 -74264781 - MLT1G LTR MaLR 0 590 139 2289 114 3 0 chr18 12412767 12413073 -74264475 - AluSx SINE Alu -5 307 1 630 227 208 102 chr18 12413073 12413229 -74264319 - MLT1G LTR MaLR -451 139 1 21 36 0 0 chr18 12413666 12413694 -74263854 + AT_rich Low_complexity Low_complexity 1 28 0 964 166 6 29 chr18 12413780 12413955 -74263593 + FRAM SINE Alu 1 167 -9 253 313 0 0 chr18 12413960 12414027 -74263521 - L2 LINE L2 -21 3292 3226 339 282 65 40 chr18 12414332 12414456 -74263092 - L2 LINE L2 0 3313 3187 3424 188 83 2 chr18 12415281 12416288 -74261260 - L1ME1 LINE L1 -50 6116 5044 2289 109 3 0 chr18 12416290 12416593 -74260955 + AluSp SINE Alu 4 307 -6 183 80 0 0 chr18 12416593 12416618 -74260930 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 * 313 74 19 19 chr18 12416616 12416670 -74260878 + (TCCC)n Simple_repeat Simple_repeat 3 56 0 1818 168 28 3 chr18 12416670 12416961 -74260587 - AluSx SINE Alu -14 298 1 1732 219 31 73 chr18 12416967 12417532 -74260016 - L1ME1 LINE L1 -1096 5050 4517 2054 123 0 4 chr18 12417532 12417809 -74259739 - AluSg SINE Alu -13 297 22 1732 219 31 73 chr18 12417809 12417928 -74259620 - L1ME1 LINE L1 -1629 4517 4395 * 5626 77 9 4 chr18 12417920 12418714 -74258834 - L1PA10 LINE L1 -2 6166 5369 3283 123 15 0 chr18 12418709 12419253 -74258295 + L1PA10 LINE L1 4798 5349 -797 * 957 196 13 98 chr18 12419298 12419424 -74258124 - L1ME1 LINE L1 -1800 4346 4211 1735 139 64 18 chr18 12419424 12419704 -74257844 - AluSx SINE Alu -19 293 1 957 196 13 98 chr18 12419704 12419893 -74257655 - L1ME1 LINE L1 -1935 4211 4058 4042 231 62 37 chr18 12419957 12420300 -74257248 - L1ME1 LINE L1 -2092 4054 3721 2285 110 3 3 chr18 12420300 12420609 -74256939 - AluSc SINE Alu 0 309 1 4042 231 62 37 chr18 12420609 12421542 -74256006 - L1ME1 LINE L1 -2425 3721 2812 2621 47 0 0 chr18 12421542 12421839 -74255709 + AluY SINE Alu 1 297 -14 4042 231 62 37 chr18 12421839 12422022 -74255526 - L1ME1 LINE L1 -3334 2812 2635 2248 119 10 0 chr18 12422022 12422324 -74255224 + AluSx SINE Alu 1 305 -7 4042 231 62 37 chr18 12422324 12422611 -74254937 - L1ME1 LINE L1 -3511 2635 2275 426 132 11 99 chr18 12422611 12422632 -74254916 - L1MC1 LINE L1 0 6333 6312 2230 95 3 0 chr18 12422632 12422928 -74254620 + AluY SINE Alu 5 301 -10 426 132 11 99 chr18 12422928 12422997 -74254551 - L1MC1 LINE L1 -21 6312 6251 1327 190 25 22 chr18 12423102 12423376 -74254172 - AluJo SINE Alu -25 287 13 1924 114 4 4 chr18 12423418 12423689 -74253859 + AluSq SINE Alu 39 309 -4 203 175 25 0 chr18 12423692 12423732 -74253816 + (TGGA)n Simple_repeat Simple_repeat 3 43 0 273 244 76 34 chr18 12423732 12423851 -74253697 + L1MC4 LINE L1 7918 8041 -1 21 0 0 0 chr18 12424328 12424349 -74253199 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 12424383 12424404 -74253144 + AT_rich Low_complexity Low_complexity 1 21 0 339 323 11 0 chr18 12424961 12425054 -74252494 - L1MC/D LINE L1 -2186 5622 5529 266 233 41 27 chr18 12425826 12425899 -74251649 - MIR SINE MIR -148 114 41 2284 92 10 0 chr18 12426031 12426326 -74251222 + AluSp SINE Alu 1 298 -15 2215 128 0 0 chr18 12426333 12426631 -74250917 + AluSx SINE Alu 1 298 -14 1272 199 9 5 chr18 12426643 12426859 -74250689 + MER58A DNA MER1_type 5 221 -3 291 296 57 0 chr18 12426958 12427046 -74250502 + L3 LINE CR1 427 519 -1058 2676 106 3 5 chr18 12427385 12427753 -74249795 - THE1C LTR MaLR -8 367 1 576 248 199 25 chr18 12427753 12428035 -74249513 + HAL1 LINE L1 62 392 -2115 312 298 0 0 chr18 12428045 12428139 -74249409 - ERVL LTR ERVL -1780 3984 3891 1246 325 10 2 chr18 12428251 12428651 -74248897 - ERVL LTR ERVL -3423 1573 1171 1396 278 51 48 chr18 12428653 12429218 -74248330 - ERVL LTR ERVL -3799 1197 631 858 336 53 15 chr18 12429380 12429776 -74247772 - ERVL LTR ERVL -4569 427 17 229 302 22 45 chr18 12429796 12429975 -74247573 - LTR16B LTR ERVL -2 462 288 298 173 27 0 chr18 12429992 12430067 -74247481 + GA-rich Low_complexity Low_complexity 4 80 0 988 279 49 23 chr18 12430067 12430372 -74247176 - LTR16B LTR ERVL -151 313 1 293 185 12 62 chr18 12430435 12430516 -74247032 + HAL1 LINE L1 724 800 -1707 1437 203 4 11 chr18 12430520 12430791 -74246757 + AluJo SINE Alu 1 269 -43 2136 241 40 88 chr18 12430798 12430888 -74246660 + HAL1 LINE L1 807 900 -1607 2321 117 0 0 chr18 12430888 12431197 -74246351 + AluSc SINE Alu 1 309 0 2136 241 40 88 chr18 12431197 12431505 -74246043 + HAL1 LINE L1 900 1221 -1286 880 168 0 0 chr18 12431505 12431636 -74245912 + FLAM_C SINE Alu 1 131 -2 2136 241 40 88 chr18 12431636 12432250 -74245298 + HAL1 LINE L1 1221 1772 -735 2758 98 13 3 chr18 12432250 12432628 -74244920 + MLT1B LTR MaLR 1 382 -8 1189 244 81 24 chr18 12432629 12433010 -74244538 + HAL1 LINE L1 1760 2162 -345 743 211 42 107 chr18 12433020 12433286 -74244262 + HAL1 LINE L1 2056 2303 -204 2302 238 35 16 chr18 12433286 12433795 -74243753 - LTR40a LTR ERVL 0 519 1 743 211 42 107 chr18 12433795 12433817 -74243731 + HAL1 LINE L1 2303 2325 -182 686 157 65 0 chr18 12433822 12433930 -74243618 + Tigger5 DNA MER2_type 1 115 -2208 * 1383 137 0 5 chr18 12433927 12434138 -74243410 + Tigger5 DNA MER2_type 2114 2323 0 587 234 16 43 chr18 12434138 12434322 -74243226 + HAL1 LINE L1 2329 2507 0 1497 162 0 4 chr18 12434776 12435010 -74242538 + AluJo SINE Alu 1 233 -79 706 155 0 0 chr18 12435010 12435113 -74242435 + AluJo/FRAM SINE Alu 188 290 -22 254 283 0 0 chr18 12435489 12435542 -74242006 - MIR SINE MIR -205 57 5 26 30 0 0 chr18 12435542 12435575 -74241973 + AT_rich Low_complexity Low_complexity 1 33 0 2634 155 31 2 chr18 12435893 12436307 -74241241 + MSTB LTR MaLR 1 426 0 323 312 0 0 chr18 12436341 12436418 -74241130 - L2 LINE L2 -5 3267 3191 432 248 37 21 chr18 12436587 12436742 -74240806 + MLT1H LTR MaLR 14 188 -221 1481 237 8 17 chr18 12437240 12437671 -74239877 - L1M4b LINE L1 -3683 3165 2781 * 4994 167 26 2 chr18 12437662 12438342 -74239206 - L1MB3 LINE L1 -2 6181 5474 216 0 0 0 chr18 12438342 12438366 -74239182 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 4994 167 26 2 chr18 12438366 12438561 -74238987 - L1MB3 LINE L1 -709 5474 5285 204 40 0 0 chr18 12438581 12438606 -74238942 + (TTTG)n Simple_repeat Simple_repeat 1 25 0 629 158 0 0 chr18 12438633 12438728 -74238820 - FLAM_A SINE Alu -46 96 2 1399 211 7 11 chr18 12438799 12439069 -74238479 + AluJo SINE Alu 21 289 -23 1062 206 99 70 chr18 12439165 12439251 -74238297 + MLT1A1 LTR MaLR 1 83 -282 1923 104 25 101 chr18 12439251 12439577 -74237971 + AluSx SINE Alu 1 301 -11 1062 206 99 70 chr18 12439577 12439624 -74237924 + MLT1A1 LTR MaLR 83 127 -238 3490 157 76 48 chr18 12439624 12440331 -74237217 - LTR8A LTR ERV1 0 727 1 1062 206 99 70 chr18 12440331 12440551 -74236997 + MLT1A1 LTR MaLR 127 365 0 1769 285 44 20 chr18 12440551 12441406 -74236142 - L1M4b LINE L1 -4349 2680 1805 1988 92 6 82 chr18 12441507 12441822 -74235726 - AluSp SINE Alu -20 293 3 22 0 0 0 chr18 12442143 12442165 -74235383 + AT_rich Low_complexity Low_complexity 1 22 0 4456 80 25 18 chr18 12442394 12442759 -74234789 - L1PB2 LINE L1 -3 6148 5776 438 0 65 47 chr18 12442759 12442866 -74234682 + (TA)n Simple_repeat Simple_repeat 2 110 0 4456 80 25 18 chr18 12442866 12443102 -74234446 - L1PB2 LINE L1 -375 5776 5543 856 274 92 33 chr18 12443196 12443638 -74233910 - L1M4b LINE L1 -5063 1683 1187 207 0 0 0 chr18 12443638 12443661 -74233887 + (TTG)n Simple_repeat Simple_repeat 2 24 0 856 274 92 33 chr18 12443661 12443940 -74233608 - L1M4b LINE L1 -5559 1187 926 298 290 62 31 chr18 12444393 12444555 -74232993 - L1M4b LINE L1 -5859 979 813 251 287 103 0 chr18 12444930 12445017 -74232531 - MLT1L LTR MaLR -206 409 314 316 317 117 57 chr18 12446786 12447120 -74230428 - L1M4b LINE L1 -5933 916 563 2283 81 26 7 chr18 12448150 12448457 -74229091 - AluSp SINE Alu 0 313 1 207 267 22 0 chr18 12449305 12449350 -74228198 - L2 LINE L2 -18 3254 3209 1804 152 3 55 chr18 12450370 12450699 -74226849 - AluJb SINE Alu 0 312 1 1151 113 10 62 chr18 12450822 12450860 -74226688 + AluY SINE Alu 102 140 -171 243 0 0 0 chr18 12450860 12450887 -74226661 + (CA)n Simple_repeat Simple_repeat 2 28 0 1151 113 10 62 chr18 12450887 12451042 -74226506 + AluY SINE Alu 140 285 -26 363 199 60 18 chr18 12451355 12451521 -74226027 + (CA)n Simple_repeat Simple_repeat 1 173 0 2452 44 0 13 chr18 12451719 12452017 -74225531 + AluY SINE Alu 1 294 -17 230 175 0 0 chr18 12452305 12452345 -74225203 + MER34 LTR ERV1 3 42 -500 409 250 112 58 chr18 12452546 12452770 -74224778 + LTR48B LTR ERV1 406 641 -3 2395 52 3 19 chr18 12453882 12454190 -74223358 - AluY SINE Alu -8 303 1 315 208 47 75 chr18 12454794 12454900 -74222648 - MIR SINE MIR -50 212 110 2306 98 0 3 chr18 12456941 12457247 -74220301 + AluSx SINE Alu 1 305 -7 344 306 139 53 chr18 12459467 12460056 -74217492 + L1MCc LINE L1 25 664 -5759 607 229 48 30 chr18 12460108 12460339 -74217209 + L1MCc LINE L1 1013 1247 -5176 342 239 103 60 chr18 12460348 12460465 -74217083 + L1MCc LINE L1 2208 2363 -4612 2061 197 59 74 chr18 12460469 12461366 -74216182 + L1MB7 LINE L1 5259 6105 -79 345 220 127 40 chr18 12461414 12461587 -74215961 + L1MCc LINE L1 2354 2541 -4581 229 260 110 40 chr18 12462050 12462150 -74215398 + L2 LINE L2 3161 3267 -5 1765 240 138 83 chr18 12462201 12462434 -74215114 + L1MC4 LINE L1 6207 6426 -1476 2413 66 0 7 chr18 12462434 12462735 -74214813 - AluY SINE Alu -12 299 1 1765 240 138 83 chr18 12462735 12463326 -74214222 + L1MC4 LINE L1 6426 6983 -919 1803 157 7 7 chr18 12463326 12463612 -74213936 + AluJb SINE Alu 1 286 -26 1765 240 138 83 chr18 12463612 12464160 -74213388 + L1MC4 LINE L1 6983 7725 -177 1930 112 22 0 chr18 12464162 12464281 -74213267 + AluSc SINE Alu 1 116 -193 264 30 0 0 chr18 12464281 12464314 -74213234 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 1930 112 22 0 chr18 12464314 12464462 -74213086 + AluSc SINE Alu 116 274 -35 2189 110 7 3 chr18 12464564 12464865 -74212683 - AluSx SINE Alu -10 302 1 1120 174 101 9 chr18 12465102 12465321 -74212227 - MER8 DNA MER2_type 0 239 1 23 0 0 0 chr18 12467073 12467096 -74210452 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr18 12468053 12468082 -74209466 + AT_rich Low_complexity Low_complexity 1 29 0 1881 126 49 3 chr18 12468387 12468672 -74208876 + AluJb SINE Alu 1 298 -14 1114 133 0 28 chr18 12469078 12469258 -74208290 + FRAM SINE Alu 1 167 -9 2038 124 0 3 chr18 12469310 12469641 -74207907 + AluSx SINE Alu 1 330 0 272 170 38 0 chr18 12469954 12470007 -74207541 + HsTC2 DNA Tc2 28 82 -1816 234 0 0 0 chr18 12473075 12473101 -74204447 + (TG)n Simple_repeat Simple_repeat 2 27 0 5724 142 28 13 chr18 12473135 12473182 -74204366 + Tigger1 DNA MER2_type 1 46 -2372 935 187 0 39 chr18 12473182 12473364 -74204184 - FAM SINE Alu 0 175 1 5724 142 28 13 chr18 12473364 12474272 -74203276 + Tigger1 DNA MER2_type 46 971 -1447 875 119 0 0 chr18 12474272 12474390 -74203158 - AluSg/x SINE Alu -17 293 176 2133 102 27 7 chr18 12474914 12475207 -74202341 + AluSq SINE Alu 1 299 -14 1419 128 0 5 chr18 12475346 12475549 -74201999 + AluJb SINE Alu 85 286 -26 302 321 44 7 chr18 12475812 12475949 -74201599 + MIR SINE MIR 47 188 -74 1917 161 74 0 chr18 12476569 12476892 -74200656 - MER7A DNA MER2_type 0 346 2 2969 96 10 0 chr18 12476986 12477392 -74200156 - L1PA8 LINE L1 -13 6159 5750 2009 180 55 5 chr18 12477417 12477801 -74199747 + MER57A LTR ERV1 1 403 0 2242 112 0 3 chr18 12477805 12478100 -74199448 - AluSx SINE Alu -18 294 1 2384 98 3 0 chr18 12478113 12478420 -74199128 - AluSx SINE Alu -4 308 1 185 182 23 0 chr18 12478593 12478637 -74198911 + MIR3 SINE MIR 114 158 -50 28 0 0 0 chr18 12479312 12479340 -74198208 + AT_rich Low_complexity Low_complexity 1 28 0 1653 160 36 33 chr18 12480323 12480630 -74196918 + MER7A DNA MER2_type 41 346 0 1999 85 4 8 chr18 12481482 12481740 -74195808 - AluSq SINE Alu -26 287 31 258 235 0 0 chr18 12481740 12481791 -74195757 + LTR30 LTR ERV1 1 51 -671 1133 114 9 99 chr18 12481792 12482016 -74195532 + LTR12 LTR ERV1 94 282 -432 323 250 11 0 chr18 12482017 12482109 -74195439 + LTR30 LTR ERV1 550 642 -80 678 120 0 0 chr18 12482112 12482212 -74195336 + LTR12 LTR ERV1 615 714 0 237 240 0 0 chr18 12482212 12482262 -74195286 - Alu SINE Alu -134 169 120 1883 209 123 9 chr18 12482488 12482953 -74194595 - MLT2B1 LTR ERVL -2 518 1 1769 176 0 7 chr18 12483155 12483433 -74194115 + AluJo SINE Alu 1 276 -36 2444 88 0 16 chr18 12483441 12483758 -74193790 - AluSx SINE Alu 0 312 1 717 271 24 71 chr18 12483758 12484211 -74193337 - L1M4 LINE L1 -1094 5052 4621 2088 104 25 21 chr18 12484246 12484551 -74192997 + AluSx SINE Alu 2 307 0 935 220 54 17 chr18 12484551 12484792 -74192756 + MLT1D LTR MaLR 172 421 -84 300 233 8 83 chr18 12484793 12484807 -74192741 - L1M4 LINE L1 -1524 4622 4609 2166 109 3 0 chr18 12484807 12485119 -74192429 + AluSx SINE Alu 1 313 0 300 233 8 83 chr18 12485119 12485223 -74192325 - L1M4 LINE L1 -1537 4609 4512 1297 97 11 0 chr18 12485231 12485406 -74192142 - AluY SINE Alu -11 300 124 540 273 30 0 chr18 12485407 12485539 -74192009 - MER69 DNA AcHobo -1090 136 1 221 354 107 6 chr18 12485755 12485933 -74191615 + MIR SINE MIR 23 218 -44 2248 116 0 22 chr18 12485933 12486252 -74191296 + AluSx SINE Alu 1 312 0 297 210 190 0 chr18 12486703 12486803 -74190745 + L1MC5 LINE L1 7710 7828 -133 2345 99 3 0 chr18 12487147 12487451 -74190097 - AluY SINE Alu -6 305 1 1945 183 80 47 chr18 12487949 12488436 -74189112 - MLT1D LTR MaLR -2 503 1 278 268 110 16 chr18 12488898 12488937 -74188611 - MIR3 SINE MIR -15 193 159 225 0 0 0 chr18 12488937 12488962 -74188586 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 278 268 110 16 chr18 12488962 12489049 -74188499 - MIR3 SINE MIR -49 159 55 1664 142 96 4 chr18 12489060 12489341 -74188207 - AluSx SINE Alu -5 307 1 219 69 0 0 chr18 12489435 12489464 -74188084 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2185 102 0 11 chr18 12489466 12489750 -74187798 - AluSg SINE Alu -29 281 1 1082 183 105 75 chr18 12490828 12491162 -74186386 - MER2 DNA MER2_type 0 344 1 182 220 120 0 chr18 12491306 12491356 -74186192 - MER5A DNA MER1_type -54 135 80 2186 88 3 3 chr18 12491531 12491814 -74185734 - AluSq SINE Alu 0 313 31 258 235 0 0 chr18 12491814 12491865 -74185683 + LTR30 LTR ERV1 1 51 -671 1133 114 9 99 chr18 12491866 12492090 -74185458 + LTR12 LTR ERV1 94 282 -432 323 250 11 0 chr18 12492091 12492183 -74185365 + LTR30 LTR ERV1 550 642 -80 678 120 0 0 chr18 12492186 12492286 -74185262 + LTR12 LTR ERV1 615 714 0 237 240 0 0 chr18 12492286 12492336 -74185212 - Alu SINE Alu -134 169 120 1869 208 122 11 chr18 12492562 12493028 -74184520 - MLT2B1 LTR ERVL -2 518 1 1798 180 0 7 chr18 12493230 12493524 -74184024 + AluJo SINE Alu 1 292 -20 642 218 30 44 chr18 12493545 12493729 -74183819 - L1MD3 LINE L1 -1060 6798 6571 1928 152 3 16 chr18 12493729 12494032 -74183516 - AluSq SINE Alu -14 299 1 642 218 30 44 chr18 12494032 12494108 -74183440 - L1MD3 LINE L1 -1287 6571 6495 800 248 92 27 chr18 12494218 12494513 -74183035 + MLT2F LTR ERVL 3 316 -347 820 230 46 0 chr18 12494554 12494750 -74182798 + MLT2F LTR ERVL 457 661 -2 1070 200 0 0 chr18 12494997 12495182 -74182366 - AluJo SINE Alu -4 308 124 2326 88 0 26 chr18 12495990 12496297 -74181251 + AluSc SINE Alu 1 299 -10 185 314 49 20 chr18 12496876 12496978 -74180570 + MIR SINE MIR 116 220 -42 602 223 16 0 chr18 12497016 12497137 -74180411 - FLAM_A SINE Alu -10 123 1 1893 190 80 32 chr18 12498203 12498479 -74179069 - L1ME LINE L1 -382 5853 5592 2133 91 18 4 chr18 12498479 12498778 -74178770 - AluSp SINE Alu 0 308 6 1893 190 80 32 chr18 12498778 12499334 -74178214 - L1ME LINE L1 -643 5592 4988 649 178 23 0 chr18 12499332 12499461 -74178087 - L1ME LINE L1 -2075 4140 4009 * 1799 192 41 82 chr18 12499504 12499649 -74177899 - L1MEc LINE L1 -3506 2709 2560 2234 107 0 3 chr18 12499649 12499938 -74177610 - AluSx SINE Alu -24 288 1 1799 192 41 82 chr18 12499938 12500231 -74177317 - L1MEc LINE L1 -3655 2560 2257 1984 147 0 0 chr18 12500231 12500516 -74177032 - AluSx SINE Alu -17 295 11 1799 192 41 82 chr18 12500516 12500796 -74176752 - L1MEc LINE L1 -3958 2257 2069 1871 152 18 0 chr18 12500796 12501099 -74176449 - AluSx SINE Alu 0 308 1 1799 192 41 82 chr18 12501099 12501223 -74176325 - L1MEc LINE L1 -4146 2069 1941 360 272 112 24 chr18 12502596 12502802 -74174746 - L1MEc LINE L1 -4442 1954 1731 311 256 56 11 chr18 12502822 12502912 -74174636 - L1MC5 LINE L1 -36 7925 7832 26 50 0 0 chr18 12502952 12502992 -74174556 + AT_rich Low_complexity Low_complexity 1 40 0 670 301 20 17 chr18 12503077 12503423 -74174125 - L1MEc LINE L1 -4642 1754 1408 1973 200 82 6 chr18 12503435 12503692 -74173856 - L1M4 LINE L1 -1068 5889 5653 207 0 0 0 chr18 12503692 12503715 -74173833 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 459 0 0 0 chr18 12503714 12503765 -74173783 + (TG)n Simple_repeat Simple_repeat 2 52 0 1973 200 82 6 chr18 12503715 12503983 -74173565 - L1M4 LINE L1 -1304 5653 5378 7257 225 30 18 chr18 12503988 12505549 -74171999 - L1M4 LINE L1 -5244 1615 36 1628 175 25 28 chr18 12505610 12505896 -74171652 - AluJo SINE Alu -27 285 1 2889 218 107 70 chr18 12505902 12506489 -74171059 - L1MEc LINE L1 -5213 1183 619 1920 177 34 60 chr18 12506489 12506902 -74170646 - MER57A LTR ERV1 -1 402 1 2889 218 107 70 chr18 12506902 12507422 -74170126 - L1MEc LINE L1 -5777 619 35 2254 125 0 0 chr18 12508921 12509226 -74168322 + AluSx SINE Alu 1 305 -7 704 170 15 0 chr18 12509241 12509376 -74168172 - Charlie5 DNA MER1_type -28 2584 2448 1556 171 11 24 chr18 12509419 12509706 -74167842 - AluJb SINE Alu -19 293 11 2151 101 28 0 chr18 12510103 12510390 -74167158 + AluSq SINE Alu 5 299 -14 1404 133 0 5 chr18 12510529 12510732 -74166816 + AluJb SINE Alu 85 286 -26 302 321 44 7 chr18 12510995 12511132 -74166416 + MIR SINE MIR 47 188 -74 1906 161 74 0 chr18 12511752 12512075 -74165473 - MER7A DNA MER2_type 0 346 2 2988 94 10 0 chr18 12512169 12512575 -74164973 - L1PA8 LINE L1 -13 6159 5750 1956 183 57 5 chr18 12512602 12512985 -74164563 + MER57A LTR ERV1 1 403 0 2291 105 0 3 chr18 12512989 12513284 -74164264 - AluSx SINE Alu -18 294 1 2061 135 3 22 chr18 12513297 12513609 -74163939 - AluSx SINE Alu -6 306 1 1047 137 28 75 chr18 12513621 12513833 -74163715 - AluJb SINE Alu -26 286 85 499 293 104 11 chr18 12514187 12514503 -74163045 + L1MC4 LINE L1 6177 6438 -1370 522 267 50 6 chr18 12514567 12514728 -74162820 + L1MC4a LINE L1 6629 6796 -1012 2265 114 3 0 chr18 12514730 12515028 -74162520 - AluSx SINE Alu -13 299 1 531 211 167 0 chr18 12515047 12515203 -74162345 + L1MC4a LINE L1 7212 7393 -415 2804 43 0 0 chr18 12515310 12515663 -74161885 + L1PA7 LINE L1 5810 6162 0 414 292 15 7 chr18 12515711 12515848 -74161700 - MER117 DNA MER1_type -42 155 18 1747 137 27 30 chr18 12516401 12516701 -74160847 - AluJo SINE Alu -13 299 1 2045 142 6 3 chr18 12518121 12518432 -74159116 + AluSx SINE Alu 1 312 0 460 293 165 49 chr18 12519638 12519751 -74157797 - L1MEd LINE L1 -5052 1067 968 207 0 0 0 chr18 12519751 12519774 -74157774 + (TA)n Simple_repeat Simple_repeat 2 24 0 460 293 165 49 chr18 12519774 12520070 -74157478 - L1MEd LINE L1 -5151 968 754 923 251 106 71 chr18 12521113 12521267 -74156281 + MLT1F1 LTR MaLR 1 148 -419 2144 107 4 4 chr18 12521267 12521548 -74156000 + AluSx SINE Alu 1 309 0 211 71 0 0 chr18 12521548 12521576 -74155972 + (TAAA)n Simple_repeat Simple_repeat 1 100 0 923 251 106 71 chr18 12521576 12521946 -74155602 + MLT1F1 LTR MaLR 148 567 0 264 172 125 16 chr18 12521997 12522061 -74155487 - MIR SINE MIR -74 188 118 2032 154 3 3 chr18 12522901 12523212 -74154336 + AluJb SINE Alu 1 311 -1 25 51 0 0 chr18 12523293 12523332 -74154216 + AT_rich Low_complexity Low_complexity 1 39 0 1597 179 67 0 chr18 12523904 12524189 -74153359 + AluJo SINE Alu 1 304 -8 205 298 61 69 chr18 12524697 12524959 -74152589 - L2 LINE L2 -93 3179 2920 2431 156 32 14 chr18 12525115 12525558 -74151990 - LTR47A LTR ERVL -1 451 1 275 270 0 14 chr18 12525656 12525730 -74151818 + (CA)n Simple_repeat Simple_repeat 1 73 0 712 268 94 19 chr18 12525753 12526302 -74151246 + MLT2E LTR ERVL 1 627 -1 257 267 0 0 chr18 12526598 12526658 -74150890 - L2 LINE L2 -1 3312 3253 195 318 132 8 chr18 12528198 12528327 -74149221 - MIR SINE MIR -1 261 117 219 364 0 0 chr18 12528481 12528558 -74148990 - L2 LINE L2 0 3313 3237 1958 143 36 18 chr18 12528563 12528798 -74148750 + MER2 DNA MER2_type 1 245 -99 2407 97 0 0 chr18 12528798 12529097 -74148451 + AluSx SINE Alu 1 299 -13 1958 143 36 18 chr18 12529097 12529196 -74148352 + MER2 DNA MER2_type 245 341 -3 2506 137 51 7 chr18 12529792 12530202 -74147346 - MSTC LTR MaLR 0 428 1 658 189 38 19 chr18 12530560 12530719 -74146829 - Charlie7 DNA MER1_type -5 2607 2446 2326 105 0 0 chr18 12530854 12531158 -74146390 + AluSx SINE Alu 1 304 -8 1605 144 4 40 chr18 12532082 12532360 -74145188 + AluJo SINE Alu 45 312 0 560 217 13 38 chr18 12534015 12534172 -74143376 + MIR SINE MIR 109 261 -1 2462 92 0 0 chr18 12534463 12534768 -74142780 - AluSg SINE Alu -5 305 1 1920 133 7 36 chr18 12534861 12535162 -74142386 - AluJo SINE Alu -18 294 3 9533 203 52 9 chr18 12535513 12538666 -74138882 - L1MB5 LINE L1 -15 6159 2871 1586 167 93 16 chr18 12538833 12539211 -74138337 - LTR37A LTR ERV1 -1 425 19 183 156 0 0 chr18 12540479 12540511 -74137037 + GA-rich Low_complexity Low_complexity 3 34 0 903 267 102 0 chr18 12540962 12541333 -74136215 + MER110A LTR ERV1 60 468 0 2447 84 3 3 chr18 12541975 12542285 -74135263 - AluSq SINE Alu -3 310 1 2401 86 3 0 chr18 12542655 12542947 -74134601 - AluSx SINE Alu -19 293 1 201 347 168 25 chr18 12543123 12543319 -74134229 - MIR SINE MIR -10 252 29 541 265 20 7 chr18 12543449 12543600 -74133948 + MLT1J LTR MaLR 7 159 -352 2349 86 7 0 chr18 12543896 12544186 -74133362 - AluY SINE Alu -19 292 1 4247 162 53 52 chr18 12544331 12545182 -74132366 - MER21B LTR ERV1 -11 852 1 180 97 0 0 chr18 12546040 12546071 -74131477 + (TG)n Simple_repeat Simple_repeat 1 31 0 700 182 33 0 chr18 12547105 12547226 -74130322 + FLAM_C SINE Alu 1 125 -8 1464 215 10 0 chr18 12547242 12547530 -74130018 + AluJo SINE Alu 1 291 -21 642 167 0 0 chr18 12547603 12547699 -74129849 - FLAM_A SINE Alu -46 96 1 2355 95 0 0 chr18 12548061 12548357 -74129191 + AluSx SINE Alu 1 296 -16 335 319 37 12 chr18 12548985 12549148 -74128400 + MIR SINE MIR 9 175 -87 192 77 0 0 chr18 12549256 12549282 -74128266 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 193 231 0 19 chr18 12550794 12550846 -74126702 + MIR SINE MIR 14 64 -198 2192 111 10 0 chr18 12551485 12551783 -74125765 + AluSx SINE Alu 1 301 -11 716 154 0 17 chr18 12552148 12552265 -74125283 + FLAM_A SINE Alu 13 127 -15 1976 144 7 10 chr18 12552792 12553091 -74124457 + AluSx SINE Alu 1 298 -14 429 348 44 59 chr18 12553578 12553839 -74123709 + L1MC4a LINE L1 4807 5060 -1086 2285 83 0 3 chr18 12553839 12554129 -74123419 - AluY SINE Alu -16 295 7 429 348 44 59 chr18 12554129 12554324 -74123224 + L1MC4a LINE L1 5060 5256 -890 747 301 73 50 chr18 12554327 12554542 -74123006 + L1MC4a LINE L1 5260 5469 -2339 1924 144 0 3 chr18 12554542 12554849 -74122699 + AluSx SINE Alu 1 306 0 747 301 73 50 chr18 12554849 12555246 -74122302 + L1MC4a LINE L1 5469 5887 -1921 1055 113 48 27 chr18 12555420 12555606 -74121942 + L1MA9 LINE L1 6118 6307 -5 1830 171 7 3 chr18 12555765 12556070 -74121478 + AluJo SINE Alu 1 306 -6 761 250 58 13 chr18 12556396 12556620 -74120928 + L1ME3A LINE L1 5932 6165 -5 200 227 40 40 chr18 12556889 12556964 -74120584 - MIR3 SINE MIR -39 169 95 280 293 106 29 chr18 12557249 12557457 -74120091 + MIR SINE MIR 28 251 -11 24 53 0 0 chr18 12557678 12557716 -74119832 + AT_rich Low_complexity Low_complexity 1 38 0 351 277 85 8 chr18 12557906 12558036 -74119512 + MIR SINE MIR 74 213 -49 985 248 160 70 chr18 12558044 12558544 -74119004 + MLT1H1 LTR MaLR 4 548 -7 2495 22 0 0 chr18 12559081 12559356 -74118192 - AluYa5 SINE Alu -2 309 35 1636 164 57 75 chr18 12559412 12559850 -74117698 + MSTB1 LTR MaLR 1 430 -2 21 0 0 0 chr18 12559914 12559935 -74117613 + AT_rich Low_complexity Low_complexity 1 21 0 2263 103 0 0 chr18 12560032 12560324 -74117224 + AluSx SINE Alu 1 292 -20 689 266 121 37 chr18 12560955 12561708 -74115840 + L2 LINE L2 2477 3306 -7 2199 112 0 16 chr18 12561746 12562051 -74115497 - AluSx SINE Alu -12 300 1 2152 110 7 3 chr18 12563117 12563407 -74114141 + AluSx SINE Alu 1 291 -21 861 202 171 17 chr18 12564041 12564328 -74113220 + L1MC4 LINE L1 7711 8041 -1 894 137 7 14 chr18 12564435 12564581 -74112967 - FRAM SINE Alu -11 165 21 21 0 0 0 chr18 12564617 12564638 -74112910 + AT_rich Low_complexity Low_complexity 1 21 0 500 214 10 0 chr18 12566542 12566640 -74110908 + MER58 DNA MER1_type 175 273 -68 44 20 0 0 chr18 12567228 12567279 -74110269 + AT_rich Low_complexity Low_complexity 1 51 0 199 286 0 0 chr18 12567639 12567702 -74109846 - MIR SINE MIR -17 245 183 1876 148 7 7 chr18 12568222 12568513 -74109035 + AluJb SINE Alu 1 291 -21 1539 200 3 14 chr18 12569085 12569380 -74108168 - AluJo SINE Alu -20 292 1 270 0 0 0 chr18 12570359 12570389 -74107159 + (TG)n Simple_repeat Simple_repeat 2 31 0 1946 151 45 12 chr18 12570437 12570769 -74106779 - MER2 DNA MER2_type -1 343 1 502 241 91 48 chr18 12571004 12571191 -74106357 + L1M4b LINE L1 4 198 -6661 2628 44 0 3 chr18 12571193 12571491 -74106057 - AluY SINE Alu -14 297 1 357 305 176 5 chr18 12571603 12571790 -74105758 + L1M4b LINE L1 372 590 -6269 1850 250 85 29 chr18 12571803 12572922 -74104626 + L1M4b LINE L1 1156 2494 -4633 2600 238 49 5 chr18 12572930 12573745 -74103803 + L1M4b LINE L1 3839 4689 -2268 22 35 0 0 chr18 12573844 12573873 -74103675 + AT_rich Low_complexity Low_complexity 1 29 0 2168 117 0 10 chr18 12574202 12574502 -74103046 - AluSx SINE Alu -9 303 7 632 169 92 0 chr18 12574507 12574649 -74102899 - L1MA4 LINE L1 -187 6113 5959 904 179 0 0 chr18 12574649 12574800 -74102748 - MER5A DNA MER1_type -38 151 1 21 0 0 0 chr18 12575262 12575283 -74102265 + AT_rich Low_complexity Low_complexity 1 21 0 1257 168 14 5 chr18 12575440 12575649 -74101899 + AluJo SINE Alu 83 293 -19 2094 186 7 33 chr18 12575705 12575745 -74101803 - MLT2D LTR ERVL 0 414 374 1229 34 23 0 chr18 12575745 12575920 -74101628 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2094 186 7 33 chr18 12575920 12576304 -74101244 - MLT2D LTR ERVL -40 374 1 1419 176 31 31 chr18 12576464 12576753 -74100795 + AluJo SINE Alu 1 289 -23 189 74 0 0 chr18 12576763 12576790 -74100758 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 266 273 23 11 chr18 12576920 12577008 -74100540 + L2 LINE L2 3225 3313 0 1313 199 13 46 chr18 12577164 12577466 -74100082 + AluSx SINE Alu 3 294 -18 259 368 11 0 chr18 12578809 12578904 -74098644 + MIR SINE MIR 161 256 -6 2261 84 7 0 chr18 12579192 12579479 -74098069 - AluSx SINE Alu -23 289 1 2454 61 0 0 chr18 12579784 12580079 -74097469 + AluY SINE Alu 1 295 -16 240 316 230 11 chr18 12581392 12581579 -74095969 - MIR SINE MIR -12 250 23 1820 170 6 6 chr18 12581588 12581900 -74095648 - AluSx SINE Alu 0 312 1 694 264 65 57 chr18 12581900 12582396 -74095152 - L1MC5 LINE L1 -202 7759 7260 225 261 0 70 chr18 12582512 12582627 -74094921 - L1MC5 LINE L1 -749 7212 7106 762 147 9 0 chr18 12582630 12582746 -74094802 + FLAM_C SINE Alu 1 117 -26 331 190 60 50 chr18 12582762 12582862 -74094686 - L1MC5 LINE L1 -832 7129 7029 1139 250 61 83 chr18 12583201 12583758 -74093790 - MER77 LTR ERV1 -6 599 55 2470 141 13 7 chr18 12584278 12584732 -74092816 + L1MB3 LINE L1 5705 6161 -22 646 146 154 0 chr18 12585073 12585183 -74092365 - FLAM_C SINE Alu -16 127 1 471 245 127 81 chr18 12585396 12585964 -74091584 + MLT1G1 LTR MaLR 1 594 -1 1143 171 58 71 chr18 12586293 12586442 -74091106 + MLT1A1 LTR MaLR 11 160 -205 234 0 0 0 chr18 12586442 12586468 -74091080 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1913 115 3 31 chr18 12586470 12586756 -74090792 - AluSx SINE Alu -32 280 3 1143 171 58 71 chr18 12586756 12586912 -74090636 + MLT1A1 LTR MaLR 161 315 -50 231 194 153 31 chr18 12586991 12587089 -74090459 - L1ME LINE L1 -483 5638 5529 379 324 70 6 chr18 12587334 12587710 -74089838 + LTR16A LTR ERVL 16 444 -6 192 125 0 0 chr18 12587905 12587937 -74089611 + (T)n Simple_repeat Simple_repeat 1 32 0 348 24 0 0 chr18 12588469 12588510 -74089038 + (TTCC)n Simple_repeat Simple_repeat 2 42 0 1705 151 13 37 chr18 12588511 12588810 -74088738 - AluJb SINE Alu -20 292 1 387 209 95 0 chr18 12590903 12591008 -74086540 + MLT1J LTR MaLR 40 154 -357 538 154 19 10 chr18 12591149 12591253 -74086295 - Charlie4 DNA MER1_type 0 1961 1857 762 272 12 20 chr18 12591260 12591513 -74086035 + L1ME LINE L1 5449 5700 -466 202 169 24 36 chr18 12591566 12591649 -74085899 + (TATAA)n Simple_repeat Simple_repeat 5 86 0 912 139 0 0 chr18 12591728 12591857 -74085691 + FLAM_C SINE Alu 1 129 -4 2319 107 10 0 chr18 12592487 12592796 -74084752 - AluSx SINE Alu 0 312 1 6827 145 20 18 chr18 12592946 12593538 -74084010 + Tigger1 DNA MER2_type 1192 1781 -637 762 205 72 18 chr18 12593538 12593704 -74083844 - FAM SINE Alu 0 175 1 6827 145 20 18 chr18 12593704 12594229 -74083319 + Tigger1 DNA MER2_type 1781 2315 -103 1456 215 18 4 chr18 12594229 12594508 -74083040 - AluJo SINE Alu -26 286 4 6827 145 20 18 chr18 12594508 12594610 -74082938 + Tigger1 DNA MER2_type 2315 2415 -3 1138 109 60 27 chr18 12594928 12594940 -74082608 + AluSg/x SINE Alu 119 129 -181 2128 116 14 0 chr18 12594940 12595233 -74082315 + AluSx SINE Alu 1 297 -15 1138 109 60 27 chr18 12595233 12595404 -74082144 + AluSg/x SINE Alu 129 308 -2 273 111 44 0 chr18 12595558 12595603 -74081945 - AluJb SINE Alu -20 282 236 290 143 0 0 chr18 12595897 12595946 -74081602 - FAM SINE Alu -7 172 124 1491 183 8 4 chr18 12595995 12596236 -74081312 - AluJb SINE Alu -70 242 1 21 0 0 0 chr18 12597233 12597254 -74080294 + AT_rich Low_complexity Low_complexity 1 21 0 464 332 79 46 chr18 12597595 12597962 -74079586 - L2 LINE L2 -8 3264 2886 229 339 9 17 chr18 12598524 12598639 -74078909 - L2 LINE L2 -1635 1679 1566 249 221 13 78 chr18 12599175 12599252 -74078296 + MIR3 SINE MIR 113 184 -24 938 199 157 13 chr18 12599362 12599674 -74077874 + L1MC4 LINE L1 7685 8041 -1 938 136 0 14 chr18 12599781 12599928 -74077620 - FRAM SINE Alu -11 165 21 21 0 0 0 chr18 12599964 12599985 -74077563 + AT_rich Low_complexity Low_complexity 1 21 0 202 264 0 0 chr18 12601442 12601495 -74076053 + L2 LINE L2 3220 3272 0 460 202 11 0 chr18 12601893 12601987 -74075561 + MER58 DNA MER1_type 179 273 -68 44 20 0 0 chr18 12602575 12602626 -74074922 + AT_rich Low_complexity Low_complexity 1 51 0 222 286 0 0 chr18 12602990 12603053 -74074495 - MIR SINE MIR -17 245 183 1855 148 7 7 chr18 12603573 12603864 -74073684 + AluJb SINE Alu 1 291 -21 1602 201 3 10 chr18 12604435 12604729 -74072819 - AluJo SINE Alu -20 292 1 211 412 79 0 chr18 12605236 12605350 -74072198 - MIR3 SINE MIR -51 157 35 288 0 0 0 chr18 12605708 12605740 -74071808 + (TG)n Simple_repeat Simple_repeat 2 33 0 1886 154 45 12 chr18 12605788 12606120 -74071428 - MER2 DNA MER2_type -1 343 1 443 269 103 0 chr18 12606355 12606511 -74071037 + L1M4b LINE L1 4 175 -6684 2559 44 0 3 chr18 12606544 12606840 -74070708 - AluY SINE Alu -16 295 1 282 316 176 5 chr18 12606952 12607139 -74070409 + L1M4b LINE L1 372 590 -6269 1794 245 61 30 chr18 12607152 12608270 -74069278 + L1M4b LINE L1 1156 2494 -4633 2538 238 49 10 chr18 12608278 12609097 -74068451 + L1M4b LINE L1 3839 4689 -2268 22 35 0 0 chr18 12609196 12609225 -74068323 + AT_rich Low_complexity Low_complexity 1 29 0 2302 114 0 0 chr18 12609554 12609860 -74067688 - AluSx SINE Alu -6 306 1 36 62 0 0 chr18 12609964 12610028 -74067520 + AT_rich Low_complexity Low_complexity 1 64 0 22 35 0 0 chr18 12611076 12611105 -74066443 + AT_rich Low_complexity Low_complexity 1 29 0 1099 225 113 16 chr18 12611729 12612164 -74065384 + L1M4b LINE L1 4943 5419 -1538 46 45 0 0 chr18 12612293 12612360 -74065188 + AT_rich Low_complexity Low_complexity 1 67 0 462 160 120 0 chr18 12612626 12612726 -74064822 + L1MB5 LINE L1 6053 6164 -10 188 326 41 51 chr18 12613260 12613358 -74064190 + L2 LINE L2 3164 3260 -12 2169 143 0 9 chr18 12613580 12613895 -74063653 - AluSx SINE Alu 0 312 1 2063 122 3 16 chr18 12613903 12614206 -74063342 - AluSx SINE Alu -13 299 1 215 177 32 65 chr18 12615285 12615347 -74062201 - L2 LINE L2 -3 3310 3251 2153 96 3 0 chr18 12615826 12616108 -74061440 + AluSx SINE Alu 21 303 -9 468 281 124 27 chr18 12616835 12617255 -74060293 + L1M4b LINE L1 5698 6181 -792 2095 139 3 0 chr18 12617255 12617549 -74059999 + AluSx SINE Alu 1 295 -17 468 281 124 27 chr18 12617549 12617648 -74059900 + L1M4b LINE L1 6181 6269 -704 2097 132 0 10 chr18 12617974 12618270 -74059278 + AluSx SINE Alu 1 293 -19 262 333 133 62 chr18 12618593 12618788 -74058760 + L2 LINE L2 3063 3271 -1 23 86 0 0 chr18 12618980 12619038 -74058510 + AT_rich Low_complexity Low_complexity 1 58 0 1922 151 0 10 chr18 12620128 12620419 -74057129 - AluJb SINE Alu -24 288 1 22 80 0 0 chr18 12620449 12620499 -74057049 + AT_rich Low_complexity Low_complexity 1 50 0 201 333 12 24 chr18 12620831 12620915 -74056633 + L2 LINE L2 3229 3311 -2 402 262 82 0 chr18 12621780 12621902 -74055646 - L2 LINE L2 -4 3309 3178 238 309 80 73 chr18 12621970 12622271 -74055277 - L2 LINE L2 -1247 2067 1765 376 283 128 27 chr18 12622574 12622761 -74054787 + L2 LINE L2 3108 3313 0 5446 240 91 42 chr18 12623075 12623182 -74054366 + L1MEc LINE L1 7 107 -6289 883 210 6 17 chr18 12623182 12623358 -74054190 + FAM SINE Alu 1 174 -1 5446 240 91 42 chr18 12623358 12624937 -74052611 + L1MEc LINE L1 107 1830 -4566 2042 165 0 0 chr18 12624937 12625246 -74052302 + AluJb SINE Alu 1 309 -3 5446 240 91 42 chr18 12625246 12625770 -74051778 + L1MEc LINE L1 1830 2327 -4069 193 250 120 50 chr18 12625862 12625962 -74051586 + MIR3 SINE MIR 99 205 -3 263 289 40 21 chr18 12626067 12626196 -74051352 - MER5B DNA MER1_type -2 187 47 180 0 0 0 chr18 12626390 12626410 -74051138 + (A)n Simple_repeat Simple_repeat 1 20 0 650 269 62 38 chr18 12626414 12626782 -74050766 + L1MEc LINE L1 2055 2436 -3960 1797 159 7 23 chr18 12626782 12627091 -74050457 + AluJb SINE Alu 1 304 -8 650 269 62 38 chr18 12627091 12627139 -74050409 + L1MEc LINE L1 2436 2481 -3915 2041 138 0 10 chr18 12627431 12627729 -74049819 + AluSx SINE Alu 1 295 -17 1818 113 0 0 chr18 12627744 12627983 -74049565 - AluSx SINE Alu -73 239 1 2129 88 0 48 chr18 12628440 12628766 -74048782 + AluY SINE Alu 1 312 0 244 96 173 19 chr18 12628768 12628820 -74048728 + L1MC4 LINE L1 7617 7676 -366 29 47 0 0 chr18 12628828 12628871 -74048677 + AT_rich Low_complexity Low_complexity 1 43 0 710 227 13 96 chr18 12628877 12628895 -74048653 + L1MC4 LINE L1 7680 7698 -344 3682 24 5 0 chr18 12628895 12629321 -74048227 - L1PA4 LINE L1 -3 6152 5725 710 227 13 96 chr18 12629321 12629698 -74047850 + L1MC4 LINE L1 7698 8042 0 202 143 48 0 chr18 12629901 12629943 -74047605 - L3 LINE CR1 -10 1567 1524 198 103 0 0 chr18 12630230 12630259 -74047289 + (TTCC)n Simple_repeat Simple_repeat 3 31 0 992 191 37 9 chr18 12630260 12630475 -74047073 - L1MA8 LINE L1 -11 6280 6060 2092 121 7 7 chr18 12630676 12630965 -74046583 + AluSx SINE Alu 1 289 -23 2975 92 74 14 chr18 12632274 12632708 -74044840 + LTR46 LTR ERV1 1 460 0 386 216 0 12 chr18 12632769 12632857 -74044691 - AluS SINE Alu -250 58 1 190 273 0 45 chr18 12633091 12633157 -74044391 - MIR3 SINE MIR -25 183 121 392 264 136 0 chr18 12633337 12633462 -74044086 - MER5A DNA MER1_type 0 189 48 416 43 0 0 chr18 12633463 12633510 -74044038 - LTR46 LTR ERV1 -182 278 232 2074 141 0 3 chr18 12633755 12634053 -74043495 - AluSx SINE Alu -15 297 1 716 149 0 0 chr18 12634078 12634192 -74043356 + L1MB7 LINE L1 5811 5924 -260 27 0 0 0 chr18 12634690 12634717 -74042831 + AT_rich Low_complexity Low_complexity 1 27 0 197 283 101 20 chr18 12634849 12634948 -74042600 + L2 LINE L2 3152 3258 -14 1187 167 99 5 chr18 12635021 12635062 -74042486 - MLT2D LTR ERVL 0 414 378 408 118 0 0 chr18 12635062 12635130 -74042418 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 1187 167 99 5 chr18 12635130 12635309 -74042239 - MLT2D LTR ERVL -36 378 173 1378 62 0 0 chr18 12635309 12635470 -74042078 + AluY SINE Alu 134 294 -17 926 177 57 0 chr18 12635470 12635645 -74041903 - MLT2D LTR ERVL -229 185 1 2173 105 0 7 chr18 12635645 12635930 -74041618 + AluSc SINE Alu 1 283 -26 21 0 0 0 chr18 12635930 12635951 -74041597 + AT_rich Low_complexity Low_complexity 1 21 0 1794 117 114 4 chr18 12636944 12637217 -74040331 - AluSx SINE Alu -9 303 1 2310 101 0 0 chr18 12637646 12637943 -74039605 - AluSx SINE Alu -15 297 1 328 266 43 0 chr18 12638592 12638686 -74038862 + MER81 DNA DNA 2 99 -15 408 40 0 0 chr18 12638735 12638785 -74038763 + (CA)n Simple_repeat Simple_repeat 1 50 0 1103 163 130 18 chr18 12639154 12639568 -74037980 + LTR54B LTR ERV1 3 492 -6 1370 127 108 0 chr18 12639683 12639896 -74037652 + MER46A DNA MER2_type 1 236 0 264 59 0 0 chr18 12641397 12641431 -74036117 + (GGAA)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr18 12644405 12644426 -74033122 + GC_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr18 12644488 12644519 -74033029 + GC_rich Low_complexity Low_complexity 1 31 0 196 248 160 0 chr18 12646324 12646423 -74031125 + MIR SINE MIR 37 154 -108 2166 94 0 17 chr18 12646725 12647039 -74030509 + AluSx SINE Alu 1 309 0 740 145 0 0 chr18 12647344 12647461 -74030087 - FRAM SINE Alu -17 159 43 1262 162 0 15 chr18 12647540 12647744 -74029804 - AluJb SINE Alu -25 287 87 228 235 0 20 chr18 12648797 12648848 -74028700 + GA-rich Low_complexity Low_complexity 3 52 0 275 284 147 16 chr18 12649227 12649417 -74028131 + L3 LINE CR1 1352 1566 -11 1800 170 50 33 chr18 12649841 12650200 -74027348 - MLT1A1 LTR MaLR 0 365 1 2157 125 33 30 chr18 12650345 12650681 -74026867 - MER1B DNA MER1_type 0 337 1 1496 252 75 40 chr18 12651573 12651684 -74025864 - L1MC4 LINE L1 0 8042 7936 2155 125 3 10 chr18 12651684 12651987 -74025561 - AluSx SINE Alu -11 301 1 1496 252 75 40 chr18 12651987 12652451 -74025097 - L1MC4 LINE L1 -106 7936 7447 203 266 108 50 chr18 12652584 12652723 -74024825 - L2 LINE L2 -95 3218 3072 1861 133 7 65 chr18 12652909 12653218 -74024330 - AluJo SINE Alu -21 291 1 893 122 0 0 chr18 12653229 12653352 -74024196 - AluJb SINE Alu -6 306 184 190 133 22 22 chr18 12653816 12653861 -74023687 + GA-rich Low_complexity Low_complexity 5 49 0 214 171 0 0 chr18 12653862 12653897 -74023651 + (CA)n Simple_repeat Simple_repeat 2 36 0 1833 122 32 11 chr18 12654049 12654327 -74023221 - AluJb SINE Alu -3 309 26 2207 123 3 0 chr18 12654413 12654714 -74022834 - AluSq SINE Alu -11 302 1 1587 210 71 3 chr18 12654775 12655113 -74022435 - MLT1A1 LTR MaLR -4 361 1 1017 100 0 0 chr18 12655143 12655273 -74022275 + AluSq/x SINE Alu 1 130 -182 465 367 26 4 chr18 12655405 12655675 -74021873 - L2 LINE L2 -773 2541 2266 1578 154 4 0 chr18 12655882 12656116 -74021432 - AluJb SINE Alu -69 243 9 26 30 0 0 chr18 12656169 12656202 -74021346 + AT_rich Low_complexity Low_complexity 1 33 0 1650 175 10 10 chr18 12656211 12656503 -74021045 + AluJo SINE Alu 4 295 -17 453 126 35 11 chr18 12656802 12656889 -74020659 - L1MB7 LINE L1 0 6184 6096 1756 153 20 23 chr18 12656916 12657217 -74020331 - AluJb SINE Alu -12 300 1 1546 125 217 0 chr18 12657250 12657545 -74020003 - MER47A DNA MER2_type -7 359 1 2228 156 78 18 chr18 12657545 12657995 -74019553 - L1MB8 LINE L1 -80 6596 6120 2336 221 71 103 chr18 12657995 12658828 -74018720 + MER21B LTR ERV1 1 806 -57 4611 199 73 36 chr18 12658841 12659452 -74018096 - L1MB8 LINE L1 -563 6119 5532 2302 115 0 0 chr18 12659452 12659757 -74017791 - AluSx SINE Alu -7 305 1 4611 199 73 36 chr18 12659757 12660703 -74016845 - L1MB8 LINE L1 -1150 5532 4506 2024 149 17 0 chr18 12660703 12661005 -74016543 - AluJb SINE Alu -4 308 2 4611 199 73 36 chr18 12661005 12661098 -74016450 - L1MB8 LINE L1 -2176 4506 4418 2325 217 82 36 chr18 12661093 12661610 -74015938 - L1MB8 LINE L1 -3269 3375 2883 * 2283 118 0 0 chr18 12661610 12661915 -74015633 - AluSx SINE Alu -7 305 1 2325 217 82 36 chr18 12661915 12661967 -74015581 - L1MB8 LINE L1 -3761 2883 2835 848 100 0 8 chr18 12661967 12662097 -74015451 + (TTCC)n Simple_repeat Simple_repeat 4 132 0 2127 95 0 11 chr18 12662098 12662372 -74015176 - AluSc SINE Alu -38 271 1 2325 217 82 36 chr18 12662372 12662944 -74014604 - L1MB8 LINE L1 -3808 2836 2174 854 213 24 0 chr18 12662954 12663118 -74014430 - AluJb SINE Alu -9 303 136 392 250 31 62 chr18 12663118 12663278 -74014270 - L1MB8 LINE L1 -4567 2079 1925 1670 139 0 57 chr18 12663278 12663559 -74013989 - AluJb SINE Alu -7 305 41 1431 186 25 38 chr18 12663564 12663929 -74013619 - L1MB8 LINE L1 -5052 1490 1131 978 147 6 29 chr18 12663929 12664099 -74013449 - AluSg/x SINE Alu -10 300 135 289 237 31 0 chr18 12664101 12664198 -74013350 - L1MB8 LINE L1 -5405 1137 1038 2159 113 0 0 chr18 12665075 12665393 -74012155 - AluSx SINE Alu 0 318 1 198 0 0 0 chr18 12666087 12666109 -74011439 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1752 165 0 0 chr18 12666112 12666379 -74011169 - AluSx SINE Alu -31 281 15 2489 117 11 0 chr18 12666466 12666817 -74010731 + THE1A LTR MaLR 1 355 0 33 25 0 0 chr18 12667075 12667115 -74010433 + AT_rich Low_complexity Low_complexity 1 40 0 524 214 145 51 chr18 12667177 12667334 -74010214 - L1MC5 LINE L1 -199 7762 7574 2200 134 0 0 chr18 12667334 12667639 -74009909 - AluSx SINE Alu -7 305 1 524 214 145 51 chr18 12667639 12667715 -74009833 - L1MC5 LINE L1 -387 7574 7507 4215 164 71 29 chr18 12667800 12668038 -74009510 - L1MC1 LINE L1 -196 6137 5911 1492 189 3 34 chr18 12668038 12668334 -74009214 - AluJb SINE Alu -21 291 5 4215 164 71 29 chr18 12668334 12668907 -74008641 - L1MC1 LINE L1 -422 5911 5279 2312 82 41 0 chr18 12668907 12669201 -74008347 - AluSq SINE Alu -7 306 1 4215 164 71 29 chr18 12669201 12669290 -74008258 - L1MC1 LINE L1 -1054 5279 5195 378 58 39 0 chr18 12669449 12669501 -74008047 + MER21A LTR ERV1 17 70 -861 2802 180 31 118 chr18 12669610 12670320 -74007228 + MER21A LTR ERV1 70 654 -277 3922 152 11 5 chr18 12670320 12670950 -74006598 - MER41B LTR ERV1 0 635 2 2802 180 31 118 chr18 12670950 12671099 -74006449 + MER21A LTR ERV1 654 814 -117 257 154 39 0 chr18 12671263 12671315 -74006233 - L1MC5 LINE L1 -722 7239 7186 5438 136 37 8 chr18 12671329 12672136 -74005412 + MER4D LTR ERV1 1 836 -67 3837 135 48 3 chr18 12672136 12672619 -74004929 + MER41B LTR ERV1 1 518 -117 2403 84 10 0 chr18 12672619 12672927 -74004621 - AluSp SINE Alu -2 311 1 3837 135 48 3 chr18 12672927 12673051 -74004497 + MER41B LTR ERV1 518 635 0 5438 136 37 8 chr18 12673051 12673112 -74004436 + MER4D LTR ERV1 836 894 -9 1775 175 21 3 chr18 12673128 12673419 -74004129 - AluJb SINE Alu -12 300 5 935 191 85 94 chr18 12673420 12673881 -74003667 - L1MC5 LINE L1 -758 7027 6730 1055 254 49 43 chr18 12673951 12674297 -74003251 - MER21B LTR ERV1 -52 811 464 561 136 136 72 chr18 12674306 12674431 -74003117 - AluJo SINE Alu -176 136 4 2098 197 35 12 chr18 12674451 12674883 -74002665 - MER119 DNA MER1_type -137 446 5 23 0 0 0 chr18 12674927 12674950 -74002598 + AT_rich Low_complexity Low_complexity 1 23 0 2153 104 3 0 chr18 12675001 12675288 -74002260 + AluSx SINE Alu 1 288 -24 1348 142 86 4 chr18 12675349 12675581 -74001967 + MER7A DNA MER2_type 2 250 -96 1633 162 36 50 chr18 12675634 12675791 -74001757 - AluJo SINE Alu -13 299 146 2146 95 35 0 chr18 12675791 12676075 -74001473 - AluSc SINE Alu -15 294 1 1633 162 36 50 chr18 12676075 12676220 -74001328 - AluJo SINE Alu -166 146 1 1127 178 56 70 chr18 12676721 12677007 -74000541 + MER68 LTR ERV1 281 562 0 732 256 191 40 chr18 12677084 12677412 -74000136 - HAL1 LINE L1 -134 2373 2096 1787 163 13 3 chr18 12677412 12677712 -73999836 - AluJo SINE Alu -9 303 1 732 256 191 40 chr18 12677712 12678032 -73999516 - HAL1 LINE L1 -411 2096 1627 5006 54 24 11 chr18 12678032 12678312 -73999236 + MER11A LTR ERVK 1 276 -990 2376 76 0 16 chr18 12678312 12678626 -73998922 + AluY SINE Alu 1 309 -2 5006 54 24 11 chr18 12678626 12679364 -73998184 + MER11A LTR ERVK 276 1266 0 650 237 101 47 chr18 12679392 12679670 -73997878 - HAL1 LINE L1 -927 1580 1288 238 191 0 0 chr18 12680544 12680591 -73996957 - HAL1 LINE L1 -1057 1450 1404 1889 171 0 0 chr18 12680624 12680929 -73996619 - AluSx SINE Alu -7 305 1 1977 202 168 49 chr18 12681004 12681718 -73995830 - L1ME2 LINE L1 -1 6557 5929 2762 150 17 13 chr18 12681718 12682177 -73995371 - MER65C LTR ERV1 0 461 1 1977 202 168 49 chr18 12682177 12682272 -73995276 - L1ME2 LINE L1 -629 5929 5847 284 0 28 0 chr18 12682272 12682308 -73995240 + (CA)n Simple_repeat Simple_repeat 2 38 0 1977 202 168 49 chr18 12682308 12682342 -73995206 - L1ME2 LINE L1 -711 5847 5589 681 218 35 0 chr18 12682342 12682484 -73995064 - AluJb SINE Alu 0 312 166 1261 253 104 7 chr18 12682493 12682916 -73994632 - L1ME2 LINE L1 -934 5606 5143 804 207 41 89 chr18 12682916 12683187 -73994361 - L1ME2 LINE L1 -6243 297 40 2098 154 24 38 chr18 12683495 12683865 -73993683 - MLT1A1 LTR MaLR 0 365 1 433 284 35 9 chr18 12684387 12684503 -73993045 + MIR SINE MIR 55 173 -89 559 243 40 13 chr18 12684903 12685060 -73992488 - L1MB8 LINE L1 0 6178 6006 2309 77 19 29 chr18 12685401 12685711 -73991837 + AluY SINE Alu 1 307 -4 2193 110 7 0 chr18 12685724 12686025 -73991523 + AluSq SINE Alu 1 303 -10 331 208 92 25 chr18 12686120 12686240 -73991308 - L1ME4a LINE L1 0 6121 5994 21 0 0 0 chr18 12686255 12686276 -73991272 + AT_rich Low_complexity Low_complexity 1 21 0 1833 151 0 62 chr18 12686375 12686548 -73991000 - AluJb SINE Alu -8 304 159 2094 46 4 0 chr18 12686548 12686789 -73990759 - L1PA5 LINE L1 -4 6150 5909 1833 151 0 62 chr18 12686789 12686939 -73990609 - AluJb SINE Alu -153 159 1 736 281 110 40 chr18 12687065 12687563 -73989985 - L1ME4a LINE L1 -2021 5787 5255 2374 94 0 3 chr18 12687697 12688004 -73989544 + AluSq SINE Alu 1 306 -7 625 271 92 4 chr18 12688010 12688239 -73989309 + L1MC4a LINE L1 6209 6457 -1351 29 28 0 0 chr18 12688355 12688391 -73989157 + AT_rich Low_complexity Low_complexity 1 36 0 2040 134 3 0 chr18 12689118 12689441 -73988107 - AluSx SINE Alu 0 324 1 1081 168 220 13 chr18 12689689 12689921 -73987627 + AluJo SINE Alu 1 280 -32 292 285 224 22 chr18 12690224 12690403 -73987145 - L1ME3 LINE L1 -20 6142 5928 2399 138 8 32 chr18 12690448 12690488 -73987060 - MER57A LTR ERV1 0 403 364 2272 120 0 0 chr18 12690488 12690796 -73986752 - AluSx SINE Alu -4 308 1 2399 138 8 32 chr18 12690796 12691155 -73986393 - MER57A LTR ERV1 -39 364 14 1095 247 101 18 chr18 12691156 12691553 -73985995 - L1ME3 LINE L1 -303 5867 5438 1403 138 87 5 chr18 12692005 12692223 -73985325 + MER46A DNA MER2_type 1 236 0 261 305 4 34 chr18 12692752 12692911 -73984637 + A-rich Low_complexity Low_complexity 2 254 0 2397 93 0 0 chr18 12693413 12693723 -73983825 - AluSx SINE Alu 0 312 3 544 178 0 4 chr18 12693919 12694055 -73983493 - U2 snRNA snRNA 0 188 4 824 94 19 0 chr18 12694398 12694504 -73983044 + FRAM SINE Alu 44 151 -25 32 47 0 16 chr18 12694806 12694853 -73982695 + AT_rich Low_complexity Low_complexity 1 48 -15 2222 103 3 3 chr18 12694853 12695154 -73982394 + AluSc SINE Alu 1 301 -8 32 47 0 16 chr18 12695154 12695170 -73982378 + AT_rich Low_complexity Low_complexity 48 63 0 2225 111 7 10 chr18 12696693 12697000 -73980548 - AluSq SINE Alu 0 313 8 2223 121 0 10 chr18 12697136 12697449 -73980099 - AluSx SINE Alu -2 310 1 1979 150 3 7 chr18 12697451 12697757 -73979791 - AluJb SINE Alu -7 305 1 1535 168 73 4 chr18 12699069 12699343 -73978205 + AluJo SINE Alu 1 293 -19 2159 103 0 10 chr18 12699758 12700049 -73977499 + AluSx SINE Alu 1 288 -24 504 279 153 22 chr18 12700714 12700936 -73976612 + MIR SINE MIR 2 252 -10 376 319 125 0 chr18 12700903 12701063 -73976485 - MIR SINE MIR -34 228 49 * 234 0 0 0 chr18 12701110 12701136 -73976412 + (TG)n Simple_repeat Simple_repeat 2 27 0 725 160 76 15 chr18 12701718 12701849 -73975699 - FLAM_C SINE Alu -3 140 2 2128 124 24 0 chr18 12701993 12702291 -73975257 - AluJo SINE Alu -7 305 1 284 184 70 63 chr18 12703315 12703487 -73974061 + L1M4 LINE L1 4289 4571 -1575 2747 227 118 33 chr18 12703525 12703870 -73973678 + L1MB1 LINE L1 3850 4164 -2025 3208 110 44 62 chr18 12703870 12704390 -73973158 - MER9 LTR ERVK 0 511 1 2747 227 118 33 chr18 12704390 12704904 -73972644 + L1MB1 LINE L1 4164 4633 -1556 2554 54 0 0 chr18 12704904 12705201 -73972347 - AluY SINE Alu -13 298 2 2747 227 118 33 chr18 12705201 12706118 -73971430 + L1MB1 LINE L1 4633 5889 -300 2055 225 82 11 chr18 12705772 12706309 -73971239 + L1ME1 LINE L1 5527 6101 -65 * 2208 94 0 26 chr18 12706774 12707083 -73970465 - AluSq SINE Alu -12 301 1 219 246 115 0 chr18 12707562 12707623 -73969925 - L2 LINE L2 -1 3312 3245 2338 85 7 0 chr18 12708301 12708595 -73968953 + AluSx SINE Alu 1 296 -16 2093 118 7 13 chr18 12714779 12715083 -73962465 - AluSx SINE Alu -8 304 3 246 214 36 0 chr18 12715426 12715482 -73962066 - MIR SINE MIR -65 143 86 279 242 0 66 chr18 12716009 12716100 -73961448 - MER53 DNA DNA -5 184 100 21 36 0 0 chr18 12716643 12716671 -73960877 + AT_rich Low_complexity Low_complexity 1 28 0 226 274 226 19 chr18 12716766 12716872 -73960676 + MER5A DNA MER1_type 59 186 -3 2198 107 0 16 chr18 12716879 12717187 -73960361 + AluSg SINE Alu 1 303 -7 2373 37 0 30 chr18 12717884 12718181 -73959367 - AluY SINE Alu -23 288 1 1141 161 30 89 chr18 12718234 12718538 -73959010 + AluSx SINE Alu 1 286 -16 363 199 60 18 chr18 12718851 12719017 -73958531 + (CA)n Simple_repeat Simple_repeat 1 173 0 2515 40 0 13 chr18 12719213 12719514 -73958034 + AluY SINE Alu 1 297 -14 1564 147 155 0 chr18 12719531 12719782 -73957766 + AluSx SINE Alu 2 291 -11 1761 199 122 54 chr18 12720160 12720452 -73957096 + Charlie2 DNA MER1_type 2074 2345 -517 1268 151 123 42 chr18 12720452 12720736 -73956812 - AluJb SINE Alu -4 308 2 1761 199 122 54 chr18 12720736 12721180 -73956368 + Charlie2 DNA MER1_type 2345 2860 -2 297 211 22 44 chr18 12721860 12721950 -73955598 - MER103 DNA DNA -35 131 44 1482 212 187 68 chr18 12722200 12723035 -73954513 + L1MC4 LINE L1 7068 7995 0 1135 204 10 0 chr18 12723209 12723410 -73954138 + MER58A DNA MER1_type 2 204 -20 214 181 14 14 chr18 12723610 12723682 -73953866 + (TA)n Simple_repeat Simple_repeat 1 72 0 1975 162 0 7 chr18 12724029 12724338 -73953210 + AluJb SINE Alu 1 307 -5 1935 191 85 30 chr18 12724408 12724725 -73952823 + L1ME LINE L1 5257 5610 -556 2397 93 6 3 chr18 12724725 12725036 -73952512 - AluSx SINE Alu 0 312 1 1935 191 85 30 chr18 12725036 12725189 -73952359 + L1ME LINE L1 5610 5753 -413 245 222 111 74 chr18 12725189 12725324 -73952224 - MIR SINE MIR -121 141 2 198 71 0 0 chr18 12725997 12726025 -73951523 + (TC)n Simple_repeat Simple_repeat 1 28 0 2156 90 21 14 chr18 12727423 12727711 -73949837 - AluSc SINE Alu -19 290 1 261 0 0 0 chr18 12727820 12727849 -73949699 + (CA)n Simple_repeat Simple_repeat 2 30 0 2554 50 3 7 chr18 12728682 12728980 -73948568 + AluSp SINE Alu 1 297 -16 635 234 62 16 chr18 12729114 12729306 -73948242 - MIR SINE MIR -29 233 33 215 329 0 0 chr18 12729350 12729420 -73948128 + L2 LINE L2 3156 3225 -47 24 77 0 0 chr18 12731093 12731145 -73946403 + GC_rich Low_complexity Low_complexity 1 52 0 57 61 0 0 chr18 12731256 12731355 -73946193 + GC_rich Low_complexity Low_complexity 1 99 0 224 245 32 11 chr18 12731475 12731581 -73945967 + (CGGG)n Simple_repeat Simple_repeat 1 108 0 215 137 59 0 chr18 12731619 12731670 -73945878 + (CCCCG)n Simple_repeat Simple_repeat 3 56 0 27 29 0 0 chr18 12731837 12731871 -73945677 + GC_rich Low_complexity Low_complexity 1 34 0 226 322 116 0 chr18 12732300 12732421 -73945127 + MIR SINE MIR 128 262 0 1555 181 9 50 chr18 12733205 12733526 -73944022 - AluJo SINE Alu -4 308 1 1982 149 0 3 chr18 12734297 12734599 -73942949 - AluJb SINE Alu -11 301 1 665 105 0 0 chr18 12734939 12735025 -73942523 - U6 snRNA snRNA -21 86 1 2167 122 0 13 chr18 12735126 12735437 -73942111 + AluSx SINE Alu 1 307 -5 2336 68 14 3 chr18 12735497 12735790 -73941758 + AluY SINE Alu 1 296 -15 403 91 39 26 chr18 12735978 12736000 -73941548 + A-rich Low_complexity Low_complexity 3 23 -57 231 36 0 0 chr18 12736000 12736028 -73941520 + (GGGA)n Simple_repeat Simple_repeat 1 28 0 403 91 39 26 chr18 12736028 12736082 -73941466 + A-rich Low_complexity Low_complexity 23 80 0 342 207 51 40 chr18 12736948 12737077 -73940471 - L1MD2 LINE L1 -10 7985 6246 1238 113 0 78 chr18 12737114 12737318 -73940230 - AluSg/x SINE Alu 0 312 125 264 59 0 0 chr18 12740160 12740194 -73937354 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 1345 123 113 0 chr18 12741695 12741907 -73935641 - MER46A DNA MER2_type 0 236 1 1113 161 129 18 chr18 12742022 12742436 -73935112 - LTR54B LTR ERV1 -6 492 3 447 52 0 0 chr18 12742802 12742860 -73934688 + (TG)n Simple_repeat Simple_repeat 1 58 0 312 266 43 0 chr18 12742909 12743003 -73934545 - MER81 DNA DNA -15 99 2 2293 104 0 0 chr18 12743652 12743949 -73933599 + AluSx SINE Alu 1 297 -15 2243 93 27 7 chr18 12744378 12744678 -73932870 + AluSx SINE Alu 1 306 -6 888 138 0 0 chr18 12745310 12745440 -73932108 - FLAM_C SINE Alu -3 130 1 2236 97 3 13 chr18 12745634 12745952 -73931596 + AluSq SINE Alu 1 313 0 2683 156 17 55 chr18 12745961 12746013 -73931535 - L1MB8 LINE L1 -2 6176 6124 1993 164 0 0 chr18 12746013 12746324 -73931224 + AluJb SINE Alu 1 311 -1 2683 156 17 55 chr18 12746324 12746855 -73930693 - L1MB8 LINE L1 -54 6124 5615 535 200 0 0 chr18 12746855 12746955 -73930593 - AluJb SINE Alu 0 312 213 2634 53 0 0 chr18 12746977 12747280 -73930268 - AluY SINE Alu -8 303 1 537 220 9 0 chr18 12747282 12747391 -73930157 - L1MB8 LINE L1 -571 5613 5504 550 220 25 125 chr18 12747414 12747504 -73930044 + L1ME3A LINE L1 4190 4287 -1859 2302 71 0 4 chr18 12747504 12747785 -73929763 + AluY SINE Alu 28 307 -4 1794 175 7 3 chr18 12747794 12748079 -73929469 + AluJo SINE Alu 1 286 -26 550 220 25 125 chr18 12748079 12748330 -73929218 + L1ME3A LINE L1 4295 4569 -1577 2393 86 0 3 chr18 12748330 12748631 -73928917 + AluSx SINE Alu 1 300 -12 550 220 25 125 chr18 12748631 12748743 -73928805 + L1ME3A LINE L1 4569 4608 -1538 2165 109 3 0 chr18 12748743 12749055 -73928493 - AluSx SINE Alu 0 313 1 550 220 25 125 chr18 12749055 12749069 -73928479 + L1ME3A LINE L1 4608 4622 -1524 935 220 54 17 chr18 12749070 12749311 -73928237 - MLT1D LTR MaLR -84 421 172 2087 104 25 21 chr18 12749311 12749616 -73927932 - AluSx SINE Alu 0 307 2 705 270 24 73 chr18 12749651 12750104 -73927444 + L1ME3A LINE L1 4621 5052 -1094 2384 102 3 13 chr18 12750104 12750419 -73927129 + AluSq SINE Alu 1 312 -1 277 185 0 0 chr18 12750439 12750493 -73927055 + L1ME3A LINE L1 5040 5093 -1053 186 43 0 0 chr18 12750495 12750518 -73927030 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 824 145 0 0 chr18 12750525 12750642 -73926906 - FLAM_C SINE Alu -25 118 2 2075 245 91 42 chr18 12750646 12751058 -73926490 + L1ME3A LINE L1 5083 5474 -696 2052 203 63 15 chr18 12751058 12751536 -73926012 - MLT1D LTR MaLR -4 501 1 2075 245 91 42 chr18 12751536 12751559 -73925989 + L1ME3A LINE L1 5474 5494 -676 2405 112 0 0 chr18 12751559 12751871 -73925677 - AluSx SINE Alu 0 312 1 2075 245 91 42 chr18 12751871 12752352 -73925196 + L1ME3A LINE L1 5494 6048 -122 1963 151 7 0 chr18 12752358 12752663 -73924885 - AluSx SINE Alu -5 307 1 1989 152 0 3 chr18 12752953 12753256 -73924292 - AluJo SINE Alu -10 302 1 272 250 0 15 chr18 12753746 12753814 -73923734 + GA-rich Low_complexity Low_complexity 2 68 0 220 279 36 27 chr18 12754217 12754328 -73923220 + MIR SINE MIR 23 134 -128 218 229 16 16 chr18 12754361 12754422 -73923126 - L2 LINE L2 -63 3250 3190 * 300 279 57 41 chr18 12754416 12754538 -73923010 - MIR3 SINE MIR -49 159 36 1093 202 0 0 chr18 12754647 12754840 -73922708 + MER2 DNA MER2_type 1 193 -152 1955 124 33 0 chr18 12754875 12755148 -73922400 - AluSx SINE Alu -26 286 5 615 266 6 0 chr18 12755212 12755370 -73922178 + MIR SINE MIR 91 249 -13 23 0 0 0 chr18 12756066 12756089 -73921459 + AT_rich Low_complexity Low_complexity 1 23 0 2036 142 3 3 chr18 12756154 12756450 -73921098 - AluJb SINE Alu -16 296 1 21 36 0 0 chr18 12757175 12757203 -73920345 + AT_rich Low_complexity Low_complexity 1 28 0 2286 102 0 3 chr18 12757337 12757631 -73919917 + AluSq SINE Alu 1 293 -20 190 172 45 25 chr18 12757682 12757839 -73919709 + (TA)n Simple_repeat Simple_repeat 2 161 0 2392 104 0 0 chr18 12757940 12758248 -73919300 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr18 12758306 12758327 -73919221 + AT_rich Low_complexity Low_complexity 1 21 0 3582 175 11 30 chr18 12758327 12758470 -73919078 + L1MB3 LINE L1 5321 5465 -718 2446 117 44 3 chr18 12758470 12758830 -73918718 - THE1C LTR MaLR 0 375 1 3582 175 11 30 chr18 12758830 12759071 -73918477 + L1MB3 LINE L1 5465 5709 -474 2430 136 42 42 chr18 12759071 12759499 -73918049 - MSTA LTR MaLR 0 428 1 3582 175 11 30 chr18 12759499 12759778 -73917770 + L1MB3 LINE L1 5709 5974 -209 2278 119 3 3 chr18 12759778 12760089 -73917459 + AluSx SINE Alu 1 311 -1 3582 175 11 30 chr18 12760089 12760125 -73917423 + L1MB3 LINE L1 5974 6009 -174 688 117 0 17 chr18 12760126 12760246 -73917302 + (GAAA)n Simple_repeat Simple_repeat 2 119 0 396 224 0 9 chr18 12760246 12760353 -73917195 + L1MB3 LINE L1 5953 6058 -125 1529 179 10 28 chr18 12761065 12761195 -73916353 + AluJo SINE Alu 12 143 -169 2051 132 0 4 chr18 12761195 12761527 -73916021 + AluSg SINE Alu 1 331 0 1529 179 10 28 chr18 12761527 12761686 -73915862 + AluJo SINE Alu 143 297 -15 259 170 0 0 chr18 12762782 12762829 -73914719 - MER5A DNA MER1_type -1 188 142 1002 170 0 0 chr18 12762866 12763019 -73914529 + AluSg/x SINE Alu 134 286 -26 1417 152 79 73 chr18 12763019 12763201 -73914347 - L1MA4 LINE L1 -10 6290 6104 2196 92 0 3 chr18 12763201 12763483 -73914065 - AluSx SINE Alu -25 287 7 1417 152 79 73 chr18 12763483 12763630 -73913918 - L1MA4 LINE L1 -196 6104 5959 854 179 0 0 chr18 12763630 12763781 -73913767 - MER5A DNA MER1_type -38 151 1 1249 164 14 5 chr18 12764412 12764619 -73912929 + AluJo SINE Alu 85 293 -19 2151 180 42 8 chr18 12764674 12764714 -73912834 - MLT2D LTR ERVL 0 414 377 1311 39 17 0 chr18 12764714 12764944 -73912604 + (TAGA)n Simple_repeat Simple_repeat 1 234 0 2151 180 42 8 chr18 12764944 12765301 -73912247 - MLT2D LTR ERVL -37 377 1 1402 179 31 31 chr18 12765462 12765752 -73911796 + AluJo SINE Alu 1 290 -22 189 74 0 0 chr18 12765762 12765789 -73911759 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 228 284 23 11 chr18 12765919 12766007 -73911541 + L2 LINE L2 3225 3313 0 2064 117 13 42 chr18 12766163 12766470 -73911078 + AluSx SINE Alu 1 298 -14 233 368 11 0 chr18 12767819 12767914 -73909634 + MIR SINE MIR 161 256 -6 2294 84 7 0 chr18 12768202 12768489 -73909059 - AluSx SINE Alu -23 289 1 13546 75 13 3 chr18 12768655 12770776 -73906772 - L1P3 LINE L1 -456 5698 3559 1710 159 7 36 chr18 12771376 12771685 -73905863 + AluJo SINE Alu 1 300 -12 296 254 227 0 chr18 12771738 12771848 -73905700 + MIR3 SINE MIR 31 165 -43 350 182 47 135 chr18 12774068 12774167 -73903381 - HAL1 LINE L1 -1345 1162 1083 1938 138 3 7 chr18 12774167 12774456 -73903092 - AluJo SINE Alu -24 288 1 350 182 47 135 chr18 12774456 12774526 -73903022 - HAL1 LINE L1 -1424 1083 1008 445 281 90 39 chr18 12774915 12775171 -73902377 - HAL1 LINE L1 -2216 291 23 1932 134 17 20 chr18 12776286 12776585 -73900963 - AluSx SINE Alu -14 298 1 1161 202 171 71 chr18 12777031 12777359 -73900189 - LTR40b LTR ERVL 0 462 81 1357 129 4 82 chr18 12777359 12777557 -73899991 + MER46A DNA MER2_type 1 177 -2554 1881 118 65 0 chr18 12777557 12777848 -73899700 + AluSx SINE Alu 3 310 0 1357 129 4 82 chr18 12777848 12777904 -73899644 + MER46A DNA MER2_type 177 236 0 1161 202 171 71 chr18 12777904 12777995 -73899553 - LTR40b LTR ERVL -380 82 1 25 0 0 0 chr18 12778210 12778235 -73899313 + AT_rich Low_complexity Low_complexity 1 25 0 2414 84 0 3 chr18 12778250 12778548 -73899000 - AluSc SINE Alu -12 297 1 323 263 42 0 chr18 12778670 12778765 -73898783 - MLT1H LTR MaLR -374 175 77 2426 132 12 39 chr18 12778889 12778958 -73898590 - Tigger2 DNA MER2_type 0 2718 2649 2305 84 0 42 chr18 12778958 12779266 -73898282 - AluSx SINE Alu -17 295 1 2426 132 12 39 chr18 12779266 12779606 -73897942 - Tigger2 DNA MER2_type -69 2649 2320 227 182 68 0 chr18 12779597 12779641 -73897907 + MER8 DNA MER2_type 191 237 -2 * 401 121 84 12 chr18 12779641 12779724 -73897824 + L1MC2 LINE L1 6256 6344 0 24 77 0 0 chr18 12779735 12779787 -73897761 + AT_rich Low_complexity Low_complexity 1 52 0 676 165 8 0 chr18 12780090 12780211 -73897337 - MER53 DNA DNA -67 122 1 1946 161 0 3 chr18 12780388 12780687 -73896861 + AluJb SINE Alu 1 298 -14 242 216 59 49 chr18 12780732 12780834 -73896714 - L1ME4a LINE L1 -197 5924 5822 510 222 88 4 chr18 12780844 12781083 -73896465 - L1ME4a LINE L1 -2 6119 5804 2347 93 7 3 chr18 12781144 12781446 -73896102 + AluSx SINE Alu 1 303 -9 2495 61 0 0 chr18 12781784 12782079 -73895469 + AluY SINE Alu 1 295 -16 209 235 222 0 chr18 12783392 12783473 -73894075 - MIR SINE MIR -12 250 152 2382 98 3 0 chr18 12783582 12783888 -73893660 - AluSx SINE Alu -5 307 1 185 182 23 0 chr18 12784061 12784105 -73893443 + MIR3 SINE MIR 114 158 -50 28 0 0 0 chr18 12784780 12784808 -73892740 + AT_rich Low_complexity Low_complexity 1 28 0 1653 160 36 33 chr18 12785808 12786115 -73891433 + MER7A DNA MER2_type 41 346 0 1403 96 0 0 chr18 12786413 12786600 -73890948 - AluY SINE Alu -1 310 124 540 273 30 0 chr18 12786601 12786733 -73890815 - MER69 DNA AcHobo -1090 136 1 221 354 107 6 chr18 12786949 12787127 -73890421 + MIR SINE MIR 23 218 -44 2248 116 0 22 chr18 12787127 12787446 -73890102 + AluSx SINE Alu 1 312 0 590 230 142 59 chr18 12787686 12787936 -73889612 - L1ME4a LINE L1 -65 6056 5828 2114 104 3 21 chr18 12787936 12788264 -73889284 + AluSx SINE Alu 1 323 0 590 230 142 59 chr18 12788264 12788421 -73889127 - L1ME4a LINE L1 -293 5828 5556 2111 108 30 0 chr18 12788600 12788896 -73888652 - AluSx SINE Alu -7 305 1 535 231 62 110 chr18 12789210 12789518 -73888030 + MER102a DNA MER1_type 35 327 -3 1185 154 6 0 chr18 12789980 12790162 -73887386 - AluJb SINE Alu -9 303 121 312 284 173 41 chr18 12791006 12791277 -73886271 + L1ME4a LINE L1 5290 5596 -525 1797 155 0 10 chr18 12791335 12791626 -73885922 - AluJo SINE Alu -24 288 1 305 282 69 0 chr18 12791631 12791762 -73885786 + L1ME4a LINE L1 5633 5772 -2036 2047 131 3 7 chr18 12791842 12792140 -73885408 - AluSx SINE Alu -15 297 1 3724 142 66 121 chr18 12792759 12793066 -73884482 + MER21A LTR ERV1 15 337 -594 1954 134 48 0 chr18 12793066 12793357 -73884191 + AluSx SINE Alu 1 305 -7 3724 142 66 121 chr18 12793357 12794013 -73883535 + MER21A LTR ERV1 337 925 -6 6304 133 5 34 chr18 12795440 12795974 -73881574 + L1MA5 LINE L1 5256 5743 -557 2184 115 0 13 chr18 12795974 12796278 -73881270 + AluSx SINE Alu 6 305 -7 6304 133 5 34 chr18 12796278 12796820 -73880728 + L1MA5 LINE L1 5743 6300 0 378 229 97 7 chr18 12796859 12797003 -73880545 + L1ME4a LINE L1 5961 6117 -4 1303 197 3 58 chr18 12797528 12797823 -73879725 - AluJo SINE Alu -33 279 1 882 276 7 32 chr18 12797849 12798157 -73879391 - L1MC4 LINE L1 -365 7677 7378 1402 90 0 0 chr18 12798674 12798851 -73878697 - AluSg/x SINE Alu -3 309 133 182 36 0 36 chr18 12798851 12798879 -73878669 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 1893 135 3 40 chr18 12798891 12799188 -73878360 - AluSg SINE Alu -24 286 1 198 0 0 0 chr18 12799212 12799234 -73878314 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 557 251 54 108 chr18 12799608 12800109 -73877439 - MLT1K LTR MaLR 0 476 3 1711 139 0 15 chr18 12800385 12800651 -73876897 - AluJo SINE Alu -38 274 13 2495 68 0 0 chr18 12800666 12800960 -73876588 + AluY SINE Alu 1 294 -17 510 92 0 0 chr18 12801226 12801291 -73876257 - AluJo SINE Alu -22 290 226 1264 123 0 11 chr18 12801291 12801470 -73876078 - AluJo SINE Alu -125 187 11 6036 129 21 30 chr18 12801658 12801820 -73875728 + L1PB1 LINE L1 4465 4627 -1524 2340 120 0 0 chr18 12801820 12802129 -73875419 + AluSg SINE Alu 1 309 -1 6036 129 21 30 chr18 12802129 12803674 -73873874 + L1PB1 LINE L1 4627 6149 -2 32 26 0 0 chr18 12804185 12804224 -73873324 + AT_rich Low_complexity Low_complexity 1 39 0 715 261 23 18 chr18 12804687 12804905 -73872643 - MIR SINE MIR -25 237 19 232 316 31 0 chr18 12804921 12805019 -73872529 - HAL1b LINE L1 -42 1306 1206 1571 179 15 56 chr18 12805893 12806093 -73871455 - AluJo SINE Alu -1 311 127 2077 126 14 0 chr18 12806093 12806379 -73871169 + AluSg SINE Alu 1 290 -20 1571 179 15 56 chr18 12806379 12806502 -73871046 - AluJo SINE Alu -185 127 1 1118 129 12 0 chr18 12806781 12806944 -73870604 - FRAM SINE Alu -1 165 1 2980 188 71 24 chr18 12808088 12808570 -73868978 - L1MB8 LINE L1 -6 6172 5649 2143 108 10 3 chr18 12808570 12808866 -73868682 - AluSx SINE Alu -14 298 1 2980 188 71 24 chr18 12808866 12809041 -73868507 - L1MB8 LINE L1 -529 5649 5484 2343 219 15 6 chr18 12809032 12809552 -73867996 - L1MB8 LINE L1 -1059 5087 4563 * 1033 174 6 0 chr18 12809678 12809839 -73867709 + AluJo SINE Alu 1 162 -150 1437 141 0 30 chr18 12810510 12810744 -73866804 - AluJo SINE Alu -1 311 85 215 250 0 19 chr18 12811815 12811867 -73865681 + CT-rich Low_complexity Low_complexity 4 54 0 1678 220 94 44 chr18 12812167 12812271 -73865277 - MLT1D LTR MaLR -4 501 404 1869 130 7 39 chr18 12812271 12812578 -73864970 + AluJb SINE Alu 16 312 0 1678 220 94 44 chr18 12812578 12812950 -73864598 - MLT1D LTR MaLR -101 404 1 265 190 0 101 chr18 12812955 12813034 -73864514 + L2 LINE L2 3243 3313 0 375 221 29 103 chr18 12813115 12813178 -73864370 + MIR SINE MIR 24 73 -189 2404 60 0 10 chr18 12813178 12813477 -73864071 + AluY SINE Alu 1 296 -15 375 221 29 103 chr18 12813477 12813549 -73863999 + MIR SINE MIR 73 149 -113 227 289 99 47 chr18 12813628 12813992 -73863556 - L2 LINE L2 -239 3074 2687 454 211 9 99 chr18 12813998 12814211 -73863337 + L1MC5 LINE L1 7739 7932 -29 1718 181 0 14 chr18 12814977 12815264 -73862284 + AluJb SINE Alu 1 283 -29 200 231 0 0 chr18 12816325 12816364 -73861184 + (TG)n Simple_repeat Simple_repeat 1 39 0 557 194 90 28 chr18 12816674 12816818 -73860730 + MER103 DNA DNA 13 165 -1 771 295 74 7 chr18 12816896 12817194 -73860354 - L1ME4a LINE L1 -270 5851 5534 1645 156 71 47 chr18 12819203 12819543 -73858005 - MLT1A2 LTR MaLR -26 348 1 373 293 138 36 chr18 12819619 12819953 -73857595 - L1ME LINE L1 -469 5652 5285 2174 114 7 3 chr18 12819975 12820282 -73857266 - AluSx SINE Alu -4 308 1 2080 156 0 0 chr18 12820855 12821163 -73856385 + AluSq SINE Alu 1 308 -5 7905 224 134 10 chr18 12825495 12828573 -73848975 - L1MB4 LINE L1 -2 6178 2699 727 219 68 10 chr18 12828586 12828791 -73848757 - MER113 DNA MER1_type? -175 346 130 4537 221 35 25 chr18 12828805 12830897 -73846651 + L1MD2 LINE L1 4203 6359 0 702 202 0 0 chr18 12831498 12831759 -73845789 + (TG)n Simple_repeat Simple_repeat 1 261 0 237 299 96 28 chr18 12832746 12832923 -73844625 - MER5A DNA MER1_type 0 189 1 1559 140 61 4 chr18 12833097 12833375 -73844173 + L1PA16 LINE L1 5864 6157 -9 2097 126 3 0 chr18 12833380 12833687 -73843861 + AluSx SINE Alu 1 308 0 327 294 126 0 chr18 12835574 12835693 -73841855 - MER117 DNA MER1_type -60 137 4 1344 255 81 82 chr18 12836564 12837292 -73840256 - L1ME3A LINE L1 -220 5950 5223 198 0 0 0 chr18 12837292 12837314 -73840234 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1542 154 47 43 chr18 12837317 12837596 -73839952 - AluJo SINE Alu -30 282 3 1911 170 9 6 chr18 12837596 12837913 -73839635 - 7SLRNA srpRNA srpRNA -2 318 1 1344 255 81 82 chr18 12837913 12838388 -73839160 - L1ME3A LINE L1 -947 5223 4733 1052 194 15 0 chr18 12838506 12838712 -73838836 - L1MC3 LINE L1 -792 6993 6785 303 54 0 0 chr18 12838714 12838751 -73838797 - MER83 LTR ERV1 -411 37 1 528 225 11 15 chr18 12841122 12841252 -73836296 + LTR40a LTR ERVL 343 515 -4 2241 117 0 0 chr18 12841402 12841701 -73835847 - AluSq SINE Alu -14 299 1 319 227 0 0 chr18 12841933 12841999 -73835549 - L1MC3 LINE L1 -1220 6565 6500 378 362 46 10 chr18 12842310 12842506 -73835042 - MIR SINE MIR -58 204 2 189 0 0 0 chr18 12843669 12843690 -73833858 + (TTTTTA)n Simple_repeat Simple_repeat 4 24 0 270 303 10 10 chr18 12843852 12843951 -73833597 - MER5A DNA MER1_type -6 183 85 393 323 85 35 chr18 12844600 12845002 -73832546 + L1M4 LINE L1 4981 5402 -744 227 254 15 15 chr18 12845343 12845410 -73832138 - MIR SINE MIR -10 252 186 180 302 0 0 chr18 12846271 12846324 -73831224 - L2 LINE L2 0 3313 3261 221 222 143 0 chr18 12847604 12847667 -73829881 + L2 LINE L2 3233 3304 -9 950 249 12 40 chr18 12847908 12848161 -73829387 - MER21B LTR ERV1 -124 739 494 1648 191 0 14 chr18 12848224 12848517 -73829031 - AluJo SINE Alu -23 289 1 1967 171 44 70 chr18 12848517 12848543 -73829005 - LTR54 LTR ERV1 -21 489 464 2587 63 0 0 chr18 12848543 12848845 -73828703 + AluY SINE Alu 1 302 -9 1967 171 44 70 chr18 12848845 12849320 -73828228 - LTR54 LTR ERV1 -46 464 1 327 279 74 38 chr18 12849350 12849623 -73827925 - MER21B LTR ERV1 -415 448 139 398 232 12 0 chr18 12849696 12849778 -73827770 - MER21B LTR ERV1 -768 95 13 2232 106 7 3 chr18 12850548 12850851 -73826697 + AluSx SINE Alu 1 304 -8 534 114 0 0 chr18 12852045 12852115 -73825433 - 5S rRNA rRNA -34 87 18 931 80 0 0 chr18 12852118 12852280 -73825268 - AluY SINE Alu 0 330 169 24 32 0 0 chr18 12853229 12853260 -73824288 + AT_rich Low_complexity Low_complexity 1 31 0 1892 158 14 3 chr18 12854862 12855159 -73822389 - AluJo SINE Alu -12 300 1 548 237 11 0 chr18 12855466 12855643 -73821905 + (TCTG)n Simple_repeat Simple_repeat 2 180 0 289 184 13 13 chr18 12855660 12855736 -73821812 + (TCTG)n Simple_repeat Simple_repeat 1 76 0 409 247 226 16 chr18 12856950 12857369 -73820179 - L2 LINE L2 -227 3086 2560 887 139 0 0 chr18 12857580 12857709 -73819839 - FLAM_C SINE Alu -3 130 2 1012 140 0 0 chr18 12858008 12858187 -73819361 + FRAM SINE Alu 4 182 0 626 244 96 22 chr18 12858655 12858884 -73818664 - MIR SINE MIR 0 262 17 318 293 31 24 chr18 12858904 12859068 -73818480 + L1MC2 LINE L1 5684 5794 -327 286 259 32 6 chr18 12859123 12859281 -73818267 + (TATAA)n Simple_repeat Simple_repeat 2 163 0 271 208 0 0 chr18 12859300 12859353 -73818195 + L1ME4a LINE L1 5975 6027 -94 995 210 116 82 chr18 12859383 12859873 -73817675 - L1MC5 LINE L1 -50 7911 7405 * 2232 193 56 12 chr18 12859872 12860570 -73816978 - L1ME1 LINE L1 -341 5825 5096 2606 163 34 36 chr18 12860604 12861161 -73816387 + L1MC2 LINE L1 5780 6335 -9 2310 86 3 0 chr18 12861247 12861551 -73815997 - L1PA8 LINE L1 0 6172 5868 770 0 11 0 chr18 12864926 12865016 -73812532 + (TAGA)n Simple_repeat Simple_repeat 4 94 0 1958 150 0 7 chr18 12865036 12865330 -73812218 + AluJo SINE Alu 6 297 -15 859 149 46 6 chr18 12865659 12865833 -73811715 - L1MB8 LINE L1 -6 6172 5992 233 73 36 36 chr18 12866331 12866386 -73811162 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 21 0 0 0 chr18 12868388 12868409 -73809139 + AT_rich Low_complexity Low_complexity 1 21 0 299 344 113 0 chr18 12869915 12870101 -73807447 + L1ME LINE L1 5646 5852 -318 219 36 0 0 chr18 12870717 12870745 -73806803 + (CA)n Simple_repeat Simple_repeat 2 29 0 527 269 12 19 chr18 12871547 12871707 -73805841 + L1ME LINE L1 5476 5634 -487 2171 77 4 0 chr18 12871708 12871980 -73805568 - AluY SINE Alu 0 311 39 1248 163 142 28 chr18 12872047 12872335 -73805213 - MLT1F LTR MaLR -8 534 214 4353 70 5 0 chr18 12872735 12873290 -73804258 - THE1B-int LTR MaLR -1019 561 4 2157 148 19 38 chr18 12873293 12873664 -73803884 - THE1B LTR MaLR 0 364 1 194 125 25 25 chr18 12874448 12874488 -73803060 - L2 LINE L2 -6 3307 3268 457 297 72 31 chr18 12874620 12874830 -73802718 + MIR SINE MIR 3 219 -43 213 39 0 0 chr18 12874920 12874946 -73802602 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 5358 77 39 6 chr18 12874952 12875349 -73802199 - L1PA8 LINE L1 0 6172 5739 2424 78 0 7 chr18 12875349 12875657 -73801891 - AluY SINE Alu -5 306 1 5358 77 39 6 chr18 12875657 12875987 -73801561 - L1PA8 LINE L1 -433 5739 5421 419 288 34 0 chr18 12876053 12876171 -73801377 + MIR SINE MIR 32 153 -109 1072 221 71 3 chr18 12876185 12876479 -73801069 + MER46C DNA MER2_type 18 331 -7 739 198 23 17 chr18 12876688 12876860 -73800688 - MIR SINE MIR 0 262 90 210 217 181 0 chr18 12877008 12877091 -73800457 - MIR SINE MIR -62 200 103 512 107 0 24 chr18 12879298 12879382 -73798166 - L1MA5A LINE L1 0 6297 6216 569 164 0 3 chr18 12880378 12880502 -73797046 + LTR16C LTR ERVL 310 470 -21 1445 182 70 73 chr18 12880529 12880803 -73796745 + L1MC3 LINE L1 5802 6076 -1709 2239 99 13 13 chr18 12880803 12881115 -73796433 + AluSq SINE Alu 1 312 -1 1445 182 70 73 chr18 12881115 12881253 -73796295 + L1MC3 LINE L1 6076 6213 -1572 1366 158 0 14 chr18 12881260 12881481 -73796067 + AluJb SINE Alu 87 304 -8 2862 166 103 16 chr18 12881485 12881740 -73795808 - MER7C DNA MER2_type -2426 602 371 2343 95 3 0 chr18 12881740 12882035 -73795513 + AluSq SINE Alu 1 296 -17 2862 166 103 16 chr18 12882035 12882332 -73795216 - MER7C DNA MER2_type -2657 371 2 7333 176 30 49 chr18 12882333 12883130 -73794418 + L1MC3 LINE L1 6212 6966 -819 2382 71 0 0 chr18 12883130 12883432 -73794116 + AluY SINE Alu 1 302 0 7333 176 30 49 chr18 12883432 12884237 -73793311 + L1MC3 LINE L1 6966 7785 0 360 175 214 48 chr18 12884838 12884964 -73792584 + LTR45B LTR ERV1 343 489 0 26 64 0 0 chr18 12885378 12885425 -73792123 + AT_rich Low_complexity Low_complexity 1 47 0 603 307 82 4 chr18 12885877 12886157 -73791391 + L1ME LINE L1 5519 5820 -301 581 179 94 0 chr18 12886169 12886275 -73791273 + MER58A DNA MER1_type 1 116 0 1932 166 12 59 chr18 12886286 12886690 -73790858 - MLT1B LTR MaLR -5 385 1 449 202 91 0 chr18 12886717 12886816 -73790732 + MER58A DNA MER1_type 117 224 0 707 198 0 0 chr18 12886871 12886997 -73790551 - FLAM_A SINE Alu -7 135 10 2144 114 28 0 chr18 12887122 12887411 -73790137 - AluSx SINE Alu -15 297 1 2280 122 0 0 chr18 12887562 12887866 -73789682 + AluSx SINE Alu 1 304 -8 1660 139 3 80 chr18 12888396 12888549 -73788999 + AluJo SINE Alu 2 120 -192 2007 106 36 4 chr18 12888549 12888848 -73788700 + AluSx SINE Alu 1 308 0 1660 139 3 80 chr18 12888848 12889017 -73788531 + AluJo SINE Alu 120 300 -12 2261 108 0 0 chr18 12889219 12889514 -73788034 + AluSq SINE Alu 1 295 -18 1393 121 10 0 chr18 12890975 12891173 -73786375 - AluSg/x SINE Alu 0 312 113 2133 120 7 10 chr18 12891801 12892100 -73785448 + AluSx SINE Alu 1 298 -14 1794 179 14 0 chr18 12892249 12892545 -73785003 - AluJo SINE Alu -12 300 1 210 269 194 22 chr18 12893107 12893241 -73784307 + MIR SINE MIR 23 179 -83 225 0 0 0 chr18 12893835 12893860 -73783688 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 1675 183 24 37 chr18 12896419 12896796 -73780752 - L1MA10 LINE L1 -7 6327 5956 785 234 26 39 chr18 12896800 12897031 -73780517 + Charlie8 DNA MER1_type 54 281 -2136 2394 95 0 10 chr18 12897071 12897377 -73780171 + AluSx SINE Alu 1 303 -9 1580 173 32 25 chr18 12898221 12898505 -73779043 - AluJo SINE Alu -26 286 1 2367 89 0 10 chr18 12899032 12899345 -73778203 + AluSq SINE Alu 1 310 -3 226 325 83 16 chr18 12899475 12899860 -73777688 + L1ME LINE L1 4240 4650 -1496 305 296 134 35 chr18 12899954 12900238 -73777310 + L1ME LINE L1 4752 5063 -1083 2493 84 0 0 chr18 12900254 12900564 -73776984 - AluY SINE Alu -1 310 1 1705 163 7 31 chr18 12900584 12900878 -73776670 - AluJo SINE Alu -25 287 1 2249 93 10 3 chr18 12900969 12901260 -73776288 - AluSx SINE Alu -19 293 1 24 0 0 0 chr18 12901270 12901294 -73776254 + AT_rich Low_complexity Low_complexity 1 24 0 1889 109 33 43 chr18 12901477 12901780 -73775768 + AluSx SINE Alu 1 300 -12 226 303 26 13 chr18 12901833 12901909 -73775639 + L1ME LINE L1 5494 5570 -551 701 209 8 0 chr18 12901961 12902094 -73775454 - MLT1B LTR MaLR 0 390 257 536 208 28 0 chr18 12902094 12902200 -73775348 - LTR62 LTR ERVK -1 718 610 1214 189 91 4 chr18 12902214 12902508 -73775040 + AluJo SINE Alu 19 333 0 379 139 12 0 chr18 12902575 12902637 -73774911 + MLT1C LTR MaLR 2 68 -306 2239 118 0 0 chr18 12903196 12903493 -73774055 + AluSx SINE Alu 1 297 -15 2573 56 3 0 chr18 12903618 12903922 -73773626 - AluY SINE Alu -6 305 1 440 261 97 23 chr18 12904310 12904486 -73773062 - MLT1K LTR MaLR -24 564 376 515 291 86 6 chr18 12904525 12904700 -73772848 - MLT1K LTR MaLR -303 285 97 2127 106 3 53 chr18 12905126 12905447 -73772101 + AluSg SINE Alu 1 305 -5 1714 183 7 7 chr18 12906682 12906972 -73770576 - AluJo SINE Alu -17 295 6 1943 156 7 0 chr18 12906980 12907269 -73770279 - AluJb SINE Alu -21 291 1 853 148 18 47 chr18 12908790 12908959 -73768589 + FRAM SINE Alu 1 164 -2 2192 119 10 7 chr18 12909155 12909465 -73768083 - AluSq SINE Alu -2 311 1 2177 92 11 0 chr18 12909526 12909807 -73767741 + AluSq SINE Alu 1 284 -29 940 128 54 0 chr18 12909814 12909994 -73767554 + AluSg/x SINE Alu 125 312 0 1472 219 150 22 chr18 12910073 12910521 -73767027 + MLT1D LTR MaLR 1 505 0 197 65 32 0 chr18 12910642 12910673 -73766875 + (TTC)n Simple_repeat Simple_repeat 2 33 0 24 0 0 0 chr18 12910687 12910711 -73766837 + AT_rich Low_complexity Low_complexity 1 24 0 5174 80 50 4 chr18 12910726 12911429 -73766119 + L1PA8 LINE L1 5438 6172 0 704 133 0 0 chr18 12911445 12911550 -73765998 - L1M1 LINE L1 -747 5555 5451 2075 127 10 13 chr18 12911569 12911883 -73765665 - AluSq SINE Alu 0 313 1 1710 168 42 6 chr18 12911889 12912222 -73765326 - L1MA7 LINE L1 -2 6289 5945 1274 293 77 18 chr18 12912222 12913338 -73764210 + HERV16 LTR ERVL 1728 2975 -2021 549 237 38 0 chr18 12913620 12913751 -73763797 + L1MC4a LINE L1 5568 5703 -2105 307 310 41 70 chr18 12913792 12913963 -73763585 - HERV16 LTR ERVL -1591 3405 3240 537 203 72 108 chr18 12913963 12914185 -73763363 + L1MC4a LINE L1 5706 5919 -1889 1205 155 15 10 chr18 12914206 12914412 -73763136 + AluJb SINE Alu 86 292 -20 1573 207 89 45 chr18 12914422 12914939 -73762609 + L1MC4a LINE L1 5941 6480 -1328 1456 114 0 35 chr18 12914942 12915169 -73762379 - Tigger2a DNA MER2_type -215 219 1 379 275 0 28 chr18 12915195 12915304 -73762244 - L2 LINE L2 -13 3300 3195 786 322 91 58 chr18 12916237 12917401 -73760147 + L2 LINE L2 2044 3240 -32 651 253 79 0 chr18 12917442 12917632 -73759916 - MIR SINE MIR -37 225 21 739 130 0 0 chr18 12919107 12919207 -73758341 - LTR12 LTR ERV1 0 714 615 534 99 0 0 chr18 12919218 12919289 -73758259 + Alu SINE Alu 2 72 -239 2321 79 0 3 chr18 12919290 12919580 -73757968 + AluY SINE Alu 22 310 -1 295 260 0 0 chr18 12919610 12919683 -73757865 - LTR30 LTR ERV1 -98 624 552 1484 91 109 73 chr18 12919684 12919958 -73757590 - LTR12 LTR ERV1 -430 284 1 24 0 0 0 chr18 12921501 12921525 -73756023 + GC_rich Low_complexity Low_complexity 1 24 0 31 68 0 0 chr18 12921842 12921901 -73755647 + GC_rich Low_complexity Low_complexity 1 59 0 1919 103 85 11 chr18 12924584 12924866 -73752682 - AluSx SINE Alu -9 303 1 1425 178 66 18 chr18 12926182 12926468 -73751080 - AluJo SINE Alu -12 300 1 330 308 168 63 chr18 12926647 12927379 -73750169 - L2 LINE L2 -25 3247 2384 2145 107 16 7 chr18 12927574 12927883 -73749665 - AluSx SINE Alu 0 312 1 193 284 25 25 chr18 12928612 12928693 -73748855 + MIR3 SINE MIR 125 205 -3 466 182 0 45 chr18 12928791 12928901 -73748647 - L1MA9 LINE L1 -38 6274 6170 33 25 0 0 chr18 12929177 12929217 -73748331 + AT_rich Low_complexity Low_complexity 1 40 0 1544 148 68 29 chr18 12929277 12929555 -73747993 - AluJo SINE Alu -23 289 1 346 229 25 57 chr18 12929566 12929723 -73747825 - L1MC5 LINE L1 -186 7775 7624 21 0 0 0 chr18 12930156 12930177 -73747371 + AT_rich Low_complexity Low_complexity 1 21 0 213 189 19 19 chr18 12930785 12930838 -73746710 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 646 24 71 0 chr18 12931204 12931288 -73746260 + 5S rRNA rRNA 1 90 -31 336 234 70 62 chr18 12932002 12932130 -73745418 - MIR3 SINE MIR -9 199 71 481 192 96 0 chr18 12932803 12932907 -73744641 - L2 LINE L2 -4 3309 3196 406 246 164 68 chr18 12933228 12933448 -73744100 + MIR SINE MIR 19 259 -3 1634 260 78 18 chr18 12933721 12934209 -73743339 - LTR40a LTR ERVL 0 519 3 229 248 129 0 chr18 12934507 12934608 -73742940 + L1MC4 LINE L1 7928 8041 -1 369 297 47 14 chr18 12935615 12935763 -73741785 - L1ME3A LINE L1 -56 6114 5962 873 167 110 20 chr18 12935853 12936098 -73741450 - MER20B DNA MER1_type 0 783 517 526 270 47 26 chr18 12936252 12936586 -73740962 - MER20B DNA MER1_type -249 534 109 26 98 0 0 chr18 12937424 12937506 -73740042 + AT_rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr18 12938109 12938137 -73739411 + AT_rich Low_complexity Low_complexity 1 28 0 191 35 0 35 chr18 12938609 12938638 -73738910 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 263 285 69 23 chr18 12938848 12938978 -73738570 - L1ME4a LINE L1 -4 6117 5982 1916 91 87 4 chr18 12940112 12940388 -73737160 + AluSg1 SINE Alu 1 299 -10 2012 149 0 0 chr18 12940828 12941123 -73736425 - AluSx SINE Alu -17 295 1 2450 49 0 3 chr18 12942112 12942399 -73735149 + AluY SINE Alu 15 300 -11 28 61 0 0 chr18 12942525 12942574 -73734974 + AT_rich Low_complexity Low_complexity 1 49 0 1720 165 0 26 chr18 12942575 12942878 -73734670 + AluJb SINE Alu 1 295 -17 255 250 0 0 chr18 12943289 12943349 -73734199 - L1MC5 LINE L1 -187 7774 7715 1165 150 128 40 chr18 12943714 12943833 -73733715 + AluJo SINE Alu 1 108 -194 233 29 29 0 chr18 12943833 12943867 -73733681 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1165 150 128 40 chr18 12943867 12944021 -73733527 + AluJo SINE Alu 108 298 -4 21 0 0 0 chr18 12944504 12944525 -73733023 + AT_rich Low_complexity Low_complexity 1 21 0 784 258 42 79 chr18 12946092 12946453 -73731095 - L1MC5 LINE L1 -63 7898 7564 2115 91 59 0 chr18 12946453 12946740 -73730808 - AluSx SINE Alu -8 304 1 784 258 42 79 chr18 12946740 12946948 -73730600 - L1MC5 LINE L1 -397 7564 7350 905 195 37 56 chr18 12946964 12947179 -73730369 + MER20 DNA MER1_type 2 212 -7 679 216 138 122 chr18 12947187 12947688 -73729860 - L1MC5 LINE L1 -756 7205 6697 305 248 136 16 chr18 12948284 12948409 -73729139 - MER103 DNA DNA -1 165 26 502 165 0 0 chr18 12949470 12949561 -73727987 - L1MA9 LINE L1 -67 6245 6155 2662 135 34 0 chr18 12949809 12950223 -73727325 - MSTA LTR MaLR 0 428 1 2394 53 40 3 chr18 12951134 12951434 -73726114 - AluY SINE Alu 0 311 1 2247 85 7 16 chr18 12952636 12952941 -73724607 - AluSx SINE Alu -2 310 9 5163 152 145 10 chr18 12953456 12953649 -73723899 - Tigger3b DNA MER2_type -1797 1231 1065 1409 123 18 13 chr18 12953649 12953876 -73723672 - MER30 DNA MER1_type -2 228 1 5163 152 145 10 chr18 12953876 12954767 -73722781 - Tigger3b DNA MER2_type -1963 1065 1 205 190 17 35 chr18 12955175 12955233 -73722315 + (TA)n Simple_repeat Simple_repeat 2 58 0 1463 194 34 14 chr18 12955857 12956150 -73721398 - AluJo SINE Alu -13 299 1 1091 191 86 4 chr18 12958162 12958440 -73719108 + MER33 DNA MER1_type 2 302 -22 2279 87 13 0 chr18 12959571 12959871 -73717677 + AluSq SINE Alu 1 304 -9 404 288 157 7 chr18 12959992 12960145 -73717403 + MER5B DNA MER1_type 3 178 0 2497 184 94 11 chr18 12960300 12960915 -73716633 + LTR65 LTR ERV1 3 668 -1 670 225 93 16 chr18 12961050 12961271 -73716277 - L1MA10 LINE L1 -3 6331 5945 502 304 0 12 chr18 12963387 12963548 -73714000 - MIR3 SINE MIR -29 179 21 2056 120 24 0 chr18 12964317 12964608 -73712940 - AluSg SINE Alu -12 298 1 430 245 21 63 chr18 12965753 12965896 -73711652 - MER5B DNA MER1_type -1 177 41 278 310 155 19 chr18 12966300 12966455 -73711093 - MIR SINE MIR -54 208 33 234 0 0 0 chr18 12967007 12967033 -73710515 + (A)n Simple_repeat Simple_repeat 1 26 0 226 283 85 38 chr18 12968388 12968494 -73709054 + L1PA13 LINE L1 1194 1304 -5483 270 0 0 0 chr18 12968783 12968813 -73708735 + (TG)n Simple_repeat Simple_repeat 2 31 0 457 241 184 23 chr18 12968834 12969008 -73708540 + MER102b DNA MER1_type 140 341 0 2317 75 0 0 chr18 12969310 12969604 -73707944 - AluY SINE Alu -17 294 1 638 251 111 8 chr18 12970067 12970302 -73707246 + MIR SINE MIR 3 261 -1 272 365 22 44 chr18 12970471 12970608 -73706940 + MIR SINE MIR 1 134 -74 25 0 0 0 chr18 12970732 12970757 -73706791 + AT_rich Low_complexity Low_complexity 1 25 0 250 235 104 9 chr18 12970887 12971002 -73706546 - L1ME4a LINE L1 -1 6120 5995 30 69 0 0 chr18 12971032 12971090 -73706458 + AT_rich Low_complexity Low_complexity 1 58 0 224 226 0 57 chr18 12971246 12971370 -73706178 + (CATATA)n Simple_repeat Simple_repeat 5 121 0 464 162 152 0 chr18 12971421 12971520 -73706028 + FRAM SINE Alu 33 146 -30 1262 229 92 29 chr18 12971543 12971988 -73705560 - L1MC4 LINE L1 -188 7854 7382 567 264 107 42 chr18 12972041 12972257 -73705291 + MIR SINE MIR 33 262 0 3196 153 78 50 chr18 12973399 12973799 -73703749 + MER44D DNA MER2_type 9 437 -2150 1640 203 31 0 chr18 12973799 12974154 -73703394 + MER47A DNA MER2_type 1 366 0 3196 153 78 50 chr18 12974154 12974431 -73703117 + MER44D DNA MER2_type 437 705 0 1364 211 178 2 chr18 12974431 12974853 -73702695 - MLT1D LTR MaLR -5 500 5 635 302 112 28 chr18 12975385 12976358 -73701190 + L2 LINE L2 2248 3304 -9 245 280 13 40 chr18 12976381 12976456 -73701092 - MER112 DNA MER1_type -183 77 5 189 0 0 0 chr18 12979580 12979601 -73697947 + (CAGG)n Simple_repeat Simple_repeat 1 21 0 2093 185 51 57 chr18 12979984 12980492 -73697056 + MLT1D LTR MaLR 1 505 0 314 270 71 56 chr18 12982212 12982408 -73695140 + MLT1J LTR MaLR 11 209 -302 757 298 75 38 chr18 12982984 12983826 -73693722 - L1MEc LINE L1 -4734 1662 790 39162 84 4 9 chr18 12983871 12989301 -73688247 - L1PA6 LINE L1 -1 6153 761 3534 118 12 4 chr18 12989301 12989808 -73687740 + MER9 LTR ERVK 1 511 0 39162 84 4 9 chr18 12989808 12990555 -73686993 - L1PA6 LINE L1 -5393 761 11 653 224 13 13 chr18 12990699 12990851 -73686697 - MER5B DNA MER1_type -19 159 8 460 270 94 79 chr18 12991179 12991560 -73685988 + MLT1I LTR MaLR 3 389 -20 1032 205 60 19 chr18 12991568 12991783 -73685765 - MER58A DNA MER1_type 0 224 1 286 300 110 19 chr18 12991834 12991978 -73685570 + L1M4 LINE L1 4039 4168 -1978 2128 123 0 7 chr18 12991978 12992278 -73685270 + AluSg1 SINE Alu 1 298 -11 286 300 110 19 chr18 12992278 12992396 -73685152 + L1M4 LINE L1 4168 4325 -1821 249 270 27 14 chr18 12994099 12994173 -73683375 + MIR SINE MIR 81 155 -107 278 231 59 6 chr18 12994221 12994390 -73683158 + (TA)n Simple_repeat Simple_repeat 2 179 0 258 229 0 105 chr18 12996346 12996451 -73681097 - AluSc SINE Alu -8 291 198 29 0 0 0 chr18 12996459 12996488 -73681060 + AT_rich Low_complexity Low_complexity 1 29 0 1967 156 3 0 chr18 12996488 12996783 -73680765 - AluJo SINE Alu -16 296 1 765 208 0 18 chr18 12997204 12997372 -73680176 - MIR SINE MIR -6 256 92 185 305 196 38 chr18 12998539 12999645 -73677903 + L2 LINE L2 1570 2850 -464 335 334 68 22 chr18 13001413 13001724 -73675824 + L3 LINE CR1 816 1140 -437 210 264 0 19 chr18 13003298 13003351 -73674197 + (CATG)n Simple_repeat Simple_repeat 1 52 0 360 231 0 0 chr18 13004179 13004283 -73673265 + (CA)n Simple_repeat Simple_repeat 1 104 0 1268 217 43 7 chr18 13004557 13004833 -73672715 + L1M3e LINE L1 1 286 -6744 2978 227 37 27 chr18 13004834 13006359 -73671189 + L1M3e LINE L1 1377 2932 -4175 2355 69 3 3 chr18 13006490 13006780 -73670768 - AluY SINE Alu 0 311 22 534 99 0 0 chr18 13006781 13006852 -73670696 - Alu SINE Alu -238 72 2 739 130 0 0 chr18 13006863 13006963 -73670585 + LTR12 LTR ERV1 615 714 0 638 258 79 0 chr18 13008439 13008629 -73668919 + MIR SINE MIR 21 225 -37 761 322 92 58 chr18 13008670 13009833 -73667715 - L2 LINE L2 -32 3240 2044 379 275 0 28 chr18 13010766 13010875 -73666673 + L2 LINE L2 3195 3300 -13 1456 114 0 35 chr18 13010901 13011128 -73666420 + Tigger2a DNA MER2_type 1 219 -215 1573 207 89 45 chr18 13011131 13011648 -73665900 - L1MC4a LINE L1 -1328 6480 5941 1205 155 15 10 chr18 13011658 13011864 -73665684 - AluJb SINE Alu -20 292 86 537 203 72 108 chr18 13011885 13012107 -73665441 - L1MC4a LINE L1 -1889 5919 5706 307 310 41 70 chr18 13012107 13012278 -73665270 + HERV16 LTR ERVL 3240 3405 -1591 532 244 38 0 chr18 13012319 13012450 -73665098 - L1MC4a LINE L1 -2105 5703 5568 1267 286 41 7 chr18 13012732 13013226 -73664322 - HERV16 LTR ERVL -2021 2975 2423 1274 271 115 40 chr18 13013266 13013848 -73663700 - HERV16 LTR ERVL -2717 2279 1728 1710 168 42 6 chr18 13013848 13014181 -73663367 + L1MA7 LINE L1 5945 6289 -2 2095 124 10 13 chr18 13014187 13014501 -73663047 + AluSq SINE Alu 1 313 0 704 133 0 0 chr18 13014520 13014625 -73662923 + L1M1 LINE L1 5451 5555 -747 5160 80 50 4 chr18 13014634 13015335 -73662213 - L1PA8 LINE L1 -2 6170 5438 24 0 0 0 chr18 13015350 13015374 -73662174 + AT_rich Low_complexity Low_complexity 1 24 0 197 65 32 0 chr18 13015388 13015419 -73662129 + (GAA)n Simple_repeat Simple_repeat 2 33 0 1390 212 154 27 chr18 13015540 13015988 -73661560 - MLT1D LTR MaLR 0 505 1 939 128 54 0 chr18 13016067 13016247 -73661301 - AluSg/x SINE Alu 0 312 125 2177 92 11 0 chr18 13016254 13016535 -73661013 - AluSq SINE Alu -29 284 1 2192 119 10 7 chr18 13016596 13016906 -73660642 + AluSq SINE Alu 1 311 -2 853 148 18 47 chr18 13017102 13017271 -73660277 - FRAM SINE Alu -2 164 1 1960 152 7 0 chr18 13018792 13019081 -73658467 + AluJb SINE Alu 1 291 -21 1618 196 7 7 chr18 13019089 13019380 -73658168 + AluJo SINE Alu 6 296 -16 2112 106 3 53 chr18 13020638 13020959 -73656589 - AluSg SINE Alu -5 305 1 515 291 86 6 chr18 13021385 13021560 -73655988 + MLT1K LTR MaLR 97 285 -303 440 261 97 23 chr18 13021599 13021775 -73655773 + MLT1K LTR MaLR 376 564 -24 2537 57 3 0 chr18 13022162 13022462 -73655086 + AluY SINE Alu 1 301 -10 28 61 0 0 chr18 13022588 13022637 -73654911 + AT_rich Low_complexity Low_complexity 1 49 0 1741 165 0 26 chr18 13022638 13022941 -73654607 + AluJb SINE Alu 1 295 -17 258 250 0 0 chr18 13023352 13023412 -73654136 - L1MC5 LINE L1 -187 7774 7715 1228 163 117 32 chr18 13023777 13023896 -73653652 + AluJo SINE Alu 1 108 -204 233 29 29 0 chr18 13023896 13023930 -73653618 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1228 163 117 32 chr18 13023930 13024092 -73653456 + AluJo SINE Alu 108 306 -6 180 0 0 0 chr18 13024574 13024594 -73652954 + (T)n Simple_repeat Simple_repeat 1 20 0 458 263 76 68 chr18 13026139 13026520 -73651028 - L1MC5 LINE L1 -32 7929 7546 6594 193 40 3 chr18 13026649 13027697 -73649851 - L1 LINE L1 -1862 5244 4129 1866 147 21 7 chr18 13027697 13027982 -73649566 + AluJb SINE Alu 1 289 -23 6594 193 40 3 chr18 13027982 13028337 -73649211 - L1 LINE L1 -2977 4129 3789 2275 58 4 4 chr18 13028339 13028616 -73648932 + THE1A LTR MaLR 1 277 -78 2954 241 44 32 chr18 13028635 13029435 -73648113 - L1 LINE L1 -3316 3790 3001 307 42 104 0 chr18 13029435 13029483 -73648065 - L1MA6 LINE L1 -4 6296 6244 2954 241 44 32 chr18 13029483 13031376 -73646172 - L1 LINE L1 -4105 3001 1377 1283 214 43 7 chr18 13031377 13031653 -73645895 - L1 LINE L1 -6744 286 1 336 234 0 0 chr18 13031935 13032029 -73645519 + (TG)n Simple_repeat Simple_repeat 1 94 0 226 245 0 19 chr18 13032846 13032899 -73644649 + (CATG)n Simple_repeat Simple_repeat 1 52 0 333 334 68 22 chr18 13034473 13034784 -73642764 - L3 LINE CR1 -437 1140 816 180 300 198 40 chr18 13036552 13037658 -73639890 - L2 LINE L2 -464 2850 1570 765 208 0 18 chr18 13038826 13038994 -73638554 + MIR SINE MIR 92 256 -6 1952 159 3 0 chr18 13039415 13039710 -73637838 + AluJo SINE Alu 1 296 -16 29 0 0 0 chr18 13039710 13039739 -73637809 + AT_rich Low_complexity Low_complexity 1 29 0 258 229 0 105 chr18 13039747 13039852 -73637696 + AluSc SINE Alu 198 291 -8 278 231 59 6 chr18 13041808 13041977 -73635571 + (TA)n Simple_repeat Simple_repeat 2 179 0 249 270 27 14 chr18 13042025 13042099 -73635449 - MIR SINE MIR -107 155 81 2136 98 7 17 chr18 13043919 13044215 -73633333 - AluSx SINE Alu -11 301 9 5313 153 143 10 chr18 13044730 13044923 -73632625 - Tigger3b DNA MER2_type -1797 1231 1065 1462 127 13 13 chr18 13044923 13045151 -73632397 - MER30 DNA MER1_type -2 228 1 5313 153 143 10 chr18 13045151 13046044 -73631504 - Tigger3b DNA MER2_type -1963 1065 1 205 190 17 35 chr18 13046452 13046510 -73631038 + (TA)n Simple_repeat Simple_repeat 1 57 0 1479 194 34 14 chr18 13047134 13047427 -73630121 - AluJo SINE Alu -13 299 1 1066 199 90 4 chr18 13049439 13049716 -73627832 + MER33 DNA MER1_type 2 302 -22 598 67 22 11 chr18 13050845 13050935 -73626613 + AluS SINE Alu 2 92 -221 1134 191 0 59 chr18 13100943 13101199 -73576349 + MER57-int LTR ERV1 5588 5828 -1709 3793 236 48 15 chr18 13101501 13102444 -73575104 + MER57-int LTR ERV1 5824 6797 -740 180 225 0 0 chr18 13102567 13102607 -73574941 - MER5B DNA MER1_type -138 40 1 1799 160 17 20 chr18 13102758 13103058 -73574490 - AluJo SINE Alu -13 299 1 283 287 28 28 chr18 13104277 13104385 -73573163 + MIR3 SINE MIR 67 174 -34 200 292 26 84 chr18 13104800 13104954 -73572594 + MIR SINE MIR 68 212 -50 452 252 116 36 chr18 13105309 13105530 -73572018 - MIR SINE MIR -6 256 12 259 366 38 16 chr18 13106608 13106791 -73570757 - MIR SINE MIR -56 206 20 365 295 50 22 chr18 13107319 13107458 -73570090 + MER5A DNA MER1_type 46 188 -1 346 302 14 29 chr18 13108298 13108437 -73569111 + MIR SINE MIR 19 155 -107 271 261 0 14 chr18 13108534 13108603 -73568945 - L2 LINE L2 -2 3270 3203 368 269 141 70 chr18 13109570 13109797 -73567751 - MER112 DNA MER1_type 0 260 18 312 288 127 45 chr18 13110330 13111000 -73566548 - L1M4 LINE L1 -2937 3209 2485 2330 108 0 0 chr18 13111105 13111410 -73566138 - AluSx SINE Alu -7 305 1 1362 273 104 48 chr18 13111422 13112044 -73565504 + MER21B LTR ERV1 98 754 -109 22 0 0 0 chr18 13112061 13112083 -73565465 + AT_rich Low_complexity Low_complexity 1 22 0 1317 189 33 56 chr18 13112170 13112476 -73565072 - MLT1A1 LTR MaLR 0 365 67 424 234 44 51 chr18 13113614 13113772 -73563776 - MLT1J2 LTR MaLR -3 447 291 361 227 38 91 chr18 13115105 13115237 -73562311 - LTR67 LTR ERVL -1 556 432 223 333 98 20 chr18 13115503 13115605 -73561943 - MIR SINE MIR -61 147 38 952 136 0 32 chr18 13117284 13117439 -73560109 + FRAM SINE Alu 3 152 -14 1994 154 0 3 chr18 13118621 13118919 -73558629 + AluJb SINE Alu 5 301 -11 2293 101 0 7 chr18 13119809 13120105 -73557443 - AluSx SINE Alu -18 294 1 375 274 26 0 chr18 13122038 13122151 -73555397 - MIR SINE MIR -86 176 61 2589 60 0 0 chr18 13122635 13122935 -73554613 + AluY SINE Alu 1 300 -11 680 218 168 0 chr18 13123037 13123216 -73554332 + MER3 DNA MER1_type 1 209 0 22 35 0 0 chr18 13123298 13123327 -73554221 + AT_rich Low_complexity Low_complexity 1 29 0 268 289 79 44 chr18 13123370 13123484 -73554064 - L2 LINE L2 0 3272 3155 2316 119 8 3 chr18 13123655 13124009 -73553539 + L1MA5A LINE L1 5938 6293 -4 728 181 27 32 chr18 13124044 13124273 -73553275 - MLT1L LTR MaLR -340 275 16 243 294 71 56 chr18 13124433 13124559 -73552989 + L2 LINE L2 3141 3268 -4 217 137 59 0 chr18 13125606 13125657 -73551891 + (CCTA)n Simple_repeat Simple_repeat 1 54 0 346 309 32 1 chr18 13125783 13125914 -73551634 + MIR SINE MIR 34 166 -63 377 269 10 10 chr18 13126863 13126973 -73550575 - MIR SINE MIR -64 144 47 1377 237 55 25 chr18 13126990 13127387 -73550161 + LTR40c LTR ERVL 56 464 -1 228 67 0 0 chr18 13127496 13127526 -73550022 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 1637 120 16 4 chr18 13128407 13128665 -73548883 + L1MB2 LINE L1 5911 6171 0 195 42 0 0 chr18 13128839 13128863 -73548685 + (TA)n Simple_repeat Simple_repeat 2 25 0 2225 131 0 3 chr18 13128883 13129189 -73548359 - AluSx SINE Alu -7 305 1 2626 161 25 43 chr18 13129317 13129871 -73547677 + L1MB3 LINE L1 5635 6178 -5 260 309 80 14 chr18 13131052 13131171 -73546377 - MIR SINE MIR -16 192 59 321 305 19 0 chr18 13133916 13134021 -73543527 + MIR SINE MIR 8 114 -148 353 233 14 0 chr18 13134024 13134097 -73543451 - MER45 DNA AcHobo 0 1581 1508 221 287 59 20 chr18 13134265 13134366 -73543182 + MIR SINE MIR 18 122 -86 221 306 82 61 chr18 13134514 13134661 -73542887 - MIR SINE MIR -11 251 102 192 238 107 60 chr18 13134752 13134763 -73542785 - MIR SINE MIR -92 116 102 625 196 190 0 chr18 13134763 13134921 -73542627 - MER5A DNA MER1_type -1 188 1 253 291 35 64 chr18 13134968 13135109 -73542439 - MER5B DNA MER1_type -33 145 9 490 191 20 95 chr18 13135714 13135817 -73541731 - MER53 DNA DNA -25 164 74 2302 82 3 7 chr18 13135817 13136109 -73541439 + AluSq SINE Alu 3 293 -20 490 191 20 95 chr18 13136109 13136152 -73541396 - MER53 DNA DNA -115 74 29 23 54 0 0 chr18 13138210 13138247 -73539301 + AT_rich Low_complexity Low_complexity 1 37 0 2162 123 6 19 chr18 13138254 13138570 -73538978 + AluSx SINE Alu 1 312 0 429 303 43 40 chr18 13138689 13138966 -73538582 - L1ME4a LINE L1 -18 6103 5826 1928 147 20 3 chr18 13140724 13141017 -73536531 - AluJo SINE Alu -13 299 2 328 250 48 36 chr18 13141762 13141846 -73535702 + L2 LINE L2 3188 3272 0 310 284 62 99 chr18 13142532 13142743 -73534805 - L2 LINE L2 -51 3221 3019 2427 97 0 3 chr18 13143415 13143715 -73533833 + AluSq SINE Alu 1 299 -14 233 250 48 36 chr18 13143932 13144016 -73533532 + MIR SINE MIR 119 203 -59 330 164 0 0 chr18 13144060 13144073 -73533475 + MER3 DNA MER1_type 36 48 -161 479 51 0 76 chr18 13144073 13144152 -73533396 - MER3 DNA MER1_type -1 208 136 4236 210 32 55 chr18 13144158 13145216 -73532332 + L1M4 LINE L1 2 1035 -5507 1767 234 51 7 chr18 13145222 13145636 -73531912 + MER70B LTR ERVL 4 435 -143 2999 234 43 42 chr18 13145646 13146290 -73531258 + L1M4 LINE L1 1023 1670 -4976 1777 167 0 0 chr18 13146290 13146565 -73530983 + AluJb SINE Alu 1 275 -37 2999 234 43 42 chr18 13146565 13147063 -73530485 + L1M4 LINE L1 1670 2166 -4480 847 101 57 13 chr18 13147178 13147337 -73530211 - L1MA8 LINE L1 -2 6289 6124 598 304 61 23 chr18 13147337 13147765 -73529783 - L1ME4a LINE L1 -513 5651 5293 409 255 166 25 chr18 13147942 13148177 -73529371 - MLT1E2 LTR MaLR -334 292 25 204 156 22 0 chr18 13148556 13148601 -73528947 + T-rich Low_complexity Low_complexity 2 47 0 21 0 0 0 chr18 13148658 13148679 -73528869 + AT_rich Low_complexity Low_complexity 1 21 0 1219 162 74 53 chr18 13148679 13148735 -73528813 - L1PB4 LINE L1 -2 6154 6101 2392 104 3 0 chr18 13148735 13149043 -73528505 + AluSx SINE Alu 1 309 -3 1219 162 74 53 chr18 13149043 13149270 -73528278 - L1PB4 LINE L1 -55 6101 5865 233 263 25 0 chr18 13149548 13149628 -73527920 - LTR67 LTR ERVL -68 489 408 330 269 141 70 chr18 13150060 13150287 -73527261 + MER112 DNA MER1_type 18 260 0 297 261 0 14 chr18 13151254 13151323 -73526225 + L2 LINE L2 3203 3270 -2 409 302 14 29 chr18 13151420 13151559 -73525989 - MIR SINE MIR -107 155 19 418 273 58 29 chr18 13152399 13152538 -73525010 - MER5A DNA MER1_type -1 188 46 311 369 37 16 chr18 13153052 13153249 -73524299 + MIR SINE MIR 8 206 -56 534 244 125 36 chr18 13154324 13154548 -73523000 + MIR SINE MIR 8 256 -6 256 322 23 76 chr18 13154903 13155074 -73522474 - MIR SINE MIR -50 212 51 332 287 28 28 chr18 13155472 13155580 -73521968 - MIR3 SINE MIR -34 174 67 1832 160 17 20 chr18 13156800 13157100 -73520448 + AluJo SINE Alu 1 299 -13 447 224 100 59 chr18 13157251 13157421 -73520127 - MER5B DNA MER1_type 0 178 2 395 73 0 0 chr18 13157526 13157581 -73519967 - MLT2A2 LTR ERVL 0 453 399 300 222 0 0 chr18 13157584 13157656 -73519892 + (CA)n Simple_repeat Simple_repeat 2 73 0 2677 100 31 0 chr18 13157658 13158049 -73519499 - MLT2A2 LTR ERVL -50 403 1 359 259 119 71 chr18 13158054 13158549 -73518999 - L2 LINE L2 -350 2964 2446 2060 130 38 0 chr18 13159818 13160134 -73517414 + L1PB3 LINE L1 5813 6140 -14 229 319 115 0 chr18 13161136 13161249 -73516299 + MIR SINE MIR 129 254 -8 260 206 82 0 chr18 13161521 13161594 -73515954 - LTR48 LTR ERV1 -167 620 542 362 236 30 89 chr18 13161632 13161874 -73515674 - MER34 LTR ERV1 -370 274 1 226 213 0 0 chr18 13162778 13162825 -73514723 + L1P LINE L1 5080 5126 -1020 390 114 13 51 chr18 13162826 13162905 -73514643 - L1M3 LINE L1 -662 5509 5434 191 290 83 48 chr18 13162957 13163102 -73514446 + L2 LINE L2 2755 2904 -410 317 253 42 53 chr18 13163218 13163313 -73514235 + L2 LINE L2 3219 3312 -1 250 273 91 8 chr18 13163360 13163481 -73514067 - L1M4 LINE L1 -1825 4321 4191 237 273 15 15 chr18 13165395 13165461 -73512087 + C-rich Low_complexity Low_complexity 1 66 0 234 0 0 0 chr18 13166946 13166972 -73510576 + (CCTG)n Simple_repeat Simple_repeat 1 26 0 681 180 17 0 chr18 13166972 13167144 -73510404 + CT-rich Low_complexity Low_complexity 4 178 0 997 210 0 11 chr18 13167348 13167589 -73509959 - L1M2 LINE L1 -4241 1975 1576 1285 46 0 0 chr18 13167976 13168129 -73509419 - L1PA8 LINE L1 -5 6167 6015 2040 154 99 5 chr18 13169043 13169438 -73508110 + MSTB1 LTR MaLR 1 432 0 279 79 0 0 chr18 13169597 13169635 -73507913 + (CA)n Simple_repeat Simple_repeat 2 39 0 22 0 0 0 chr18 13170232 13170254 -73507294 + AT_rich Low_complexity Low_complexity 1 22 0 286 293 164 29 chr18 13171586 13171726 -73505822 + MIR3 SINE MIR 30 188 -20 196 333 0 36 chr18 13172780 13172864 -73504684 + MIR SINE MIR 107 187 -75 468 318 53 6 chr18 13173445 13173615 -73503933 - MIR3 SINE MIR -9 199 22 413 312 129 6 chr18 13173721 13173891 -73503657 + MIR3 SINE MIR 3 193 -15 2079 90 0 8 chr18 13173897 13174164 -73503384 + AluSx SINE Alu 27 291 -21 224 245 19 0 chr18 13174787 13174840 -73502708 + L2 LINE L2 3219 3272 0 2221 237 31 20 chr18 13175163 13175767 -73501781 + MLT1E2 LTR MaLR 1 611 -15 337 294 17 17 chr18 13175778 13175897 -73501651 + MIR3 SINE MIR 85 203 -5 413 281 216 0 chr18 13175923 13176108 -73501440 + MIR SINE MIR 27 251 -11 714 224 152 63 chr18 13177218 13177434 -73500114 + MIR SINE MIR 5 245 -17 541 111 0 12 chr18 13177434 13177515 -73500033 + MADE1 DNA Mariner 1 80 0 714 224 152 63 chr18 13177515 13177535 -73500013 + MIR SINE MIR 245 262 0 2363 104 0 19 chr18 13177618 13177934 -73499614 + AluSx SINE Alu 1 310 -2 243 232 14 14 chr18 13179295 13179364 -73498184 + Charlie5 DNA MER1_type 37 105 -2507 1677 188 42 8 chr18 13179369 13179746 -73497802 + Charlie5 DNA MER1_type 2235 2624 0 479 187 24 108 chr18 13181197 13181363 -73496185 + MER97a DNA MER1_type? 28 179 -715 1381 201 24 2 chr18 13182843 13183171 -73494377 - Tigger3b DNA MER2_type 0 1231 828 2241 131 24 0 chr18 13183172 13183500 -73494048 + MER1B DNA MER1_type 1 336 -3 3473 127 89 35 chr18 13183508 13184285 -73493263 - Tigger3b DNA MER2_type -398 833 3 189 74 0 0 chr18 13184285 13184312 -73493236 + (TG)n Simple_repeat Simple_repeat 2 28 0 2053 160 78 15 chr18 13184710 13185110 -73492438 + MSTB LTR MaLR 1 425 -1 319 345 30 5 chr18 13185128 13185331 -73492217 + MLT2F LTR ERVL 456 663 0 3418 120 10 2 chr18 13186814 13187307 -73490241 - LOR1a LTR ERV1 0 497 1 1688 124 7 33 chr18 13187668 13187943 -73489605 - MER101 LTR ERV1 -202 272 5 4352 116 20 6 chr18 13187986 13188641 -73488907 - L1MC1 LINE L1 -346 5987 5324 210 210 16 16 chr18 13188684 13188746 -73488802 + A-rich Low_complexity Low_complexity 1 62 0 227 265 137 20 chr18 13189070 13189172 -73488376 - MIR SINE MIR -11 251 138 513 229 43 7 chr18 13190873 13191013 -73486535 - MER5B DNA MER1_type -5 173 29 190 274 0 0 chr18 13191192 13191243 -73486305 - L2 LINE L2 0 3313 3263 708 218 12 24 chr18 13191713 13191878 -73485670 + MER5A DNA MER1_type 27 189 0 424 287 105 22 chr18 13191933 13192114 -73485434 + MLT1H LTR MaLR 29 224 -325 285 179 281 41 chr18 13192153 13192350 -73485198 + MLT1H LTR MaLR 224 545 -4 431 243 73 62 chr18 13192869 13193046 -73484502 - MLT1J2 LTR MaLR -6 444 266 229 284 182 34 chr18 13193625 13193801 -73483747 - MIR3 SINE MIR -2 206 5 3797 99 0 33 chr18 13195341 13195585 -73481963 + MER1A DNA MER1_type 3 254 -2446 2076 130 7 23 chr18 13195585 13195892 -73481656 - AluSx SINE Alu -10 302 1 3797 99 0 33 chr18 13195892 13196190 -73481358 + MER1A DNA MER1_type 254 527 0 1643 132 56 0 chr18 13196255 13196542 -73481006 - L1MA8 LINE L1 -2 6289 5987 358 254 8 74 chr18 13196739 13196861 -73480687 + MER5B DNA MER1_type 29 142 -36 1108 228 104 19 chr18 13196905 13197318 -73480230 + MLT1C LTR MaLR 16 463 -4 3679 183 62 108 chr18 13197636 13198920 -73478628 + Tigger3b DNA MER2_type 7 1231 0 6137 251 52 26 chr18 13198922 13200704 -73476844 + ERVL-E LTR ERVL 1842 3743 -2021 471 320 13 0 chr18 13200694 13200847 -73476701 + ERVL-E LTR ERVL 5581 5735 -29 * 781 284 149 38 chr18 13200850 13201354 -73476194 + MLT2E LTR ERVL 10 569 -59 1639 184 4 7 chr18 13202252 13202530 -73475018 - AluJb SINE Alu -35 277 1 195 313 0 0 chr18 13202534 13202582 -73474966 + MIR3 SINE MIR 110 157 -51 2968 6 0 0 chr18 13202864 13203177 -73474371 + AluYb8 SINE Alu 1 313 -5 1886 140 68 22 chr18 13203619 13203941 -73473607 - MER1B DNA MER1_type 0 337 1 606 266 32 15 chr18 13206345 13206557 -73470991 - MER106B DNA MER1_type 0 236 15 1695 169 23 29 chr18 13206864 13207171 -73470377 + AluJo SINE Alu 1 305 -7 447 260 51 61 chr18 13207171 13207367 -73470181 + MIR SINE MIR 50 243 -19 423 245 0 0 chr18 13207634 13207732 -73469816 + MIR SINE MIR 53 150 -112 2133 117 30 7 chr18 13208197 13208497 -73469051 - AluSx SINE Alu -5 307 1 27 0 0 0 chr18 13208550 13208577 -73468971 + AT_rich Low_complexity Low_complexity 1 27 0 8971 162 22 30 chr18 13208577 13209947 -73467601 - L1PA16 LINE L1 -5 6161 4781 2263 134 91 10 chr18 13209947 13210343 -73467205 + MSTA LTR MaLR 1 428 0 8971 162 22 30 chr18 13210343 13211828 -73465720 - L1PA16 LINE L1 -1385 4781 3313 253 323 11 11 chr18 13211829 13211922 -73465626 + MLT1L LTR MaLR 449 541 -74 2507 51 0 0 chr18 13212937 13213231 -73464317 - AluY SINE Alu -17 294 1 197 309 155 36 chr18 13213880 13214048 -73463500 + L2 LINE L2 2082 2269 -1045 1827 175 0 26 chr18 13214719 13215028 -73462520 - AluJo SINE Alu -11 301 1 2732 185 33 11 chr18 13215054 13215605 -73461943 + L1MB4 LINE L1 5618 6180 0 399 73 0 0 chr18 13216773 13216828 -73460720 + (CCAA)n Simple_repeat Simple_repeat 1 55 0 455 292 182 24 chr18 13219741 13220159 -73457389 + L3 LINE CR1 1069 1552 -25 1011 182 48 105 chr18 13220278 13220448 -73457100 - LTR37A LTR ERV1 0 426 285 1676 104 0 0 chr18 13220448 13220668 -73456880 + AluSg/x SINE Alu 90 309 -3 1011 182 48 105 chr18 13220668 13220848 -73456700 - LTR37A LTR ERV1 -141 285 96 1586 176 25 0 chr18 13222344 13222623 -73454925 - L1 LINE L1 -2155 3991 3706 * 7302 159 76 31 chr18 13222608 13223016 -73454532 + L1MA7 LINE L1 3920 4309 -1982 2481 71 7 0 chr18 13223016 13223312 -73454236 + AluY SINE Alu 1 298 -13 7302 159 76 31 chr18 13223312 13224680 -73452868 + L1MA7 LINE L1 4309 5813 -478 2351 156 33 14 chr18 13224680 13225104 -73452444 + MSTB1 LTR MaLR 1 432 0 7302 159 76 31 chr18 13225104 13225606 -73451942 + L1MA7 LINE L1 5813 6291 0 2018 108 30 3 chr18 13227999 13228296 -73449252 - AluSq SINE Alu -8 305 1 2461 238 61 55 chr18 13229395 13230351 -73447197 - L1ME3A LINE L1 -13 6226 5269 687 259 125 25 chr18 13230383 13231005 -73446543 - L1MEc LINE L1 -3701 2518 1884 307 313 12 0 chr18 13231567 13231650 -73445898 - MIR SINE MIR -106 102 19 456 211 102 22 chr18 13232492 13232672 -73444876 + MIR SINE MIR 23 221 -41 232 286 132 23 chr18 13233219 13233408 -73444140 + MIR SINE MIR 8 258 -4 321 96 0 19 chr18 13235348 13235400 -73442148 + MADE1 DNA Mariner 29 79 -1 22 35 0 0 chr18 13236148 13236177 -73441371 + GC_rich Low_complexity Low_complexity 1 29 0 23 78 0 0 chr18 13236658 13236709 -73440839 + AT_rich Low_complexity Low_complexity 1 51 0 297 0 0 0 chr18 13237392 13237425 -73440123 + (TG)n Simple_repeat Simple_repeat 2 34 0 1076 218 143 85 chr18 13237425 13237860 -73439688 - MER21B LTR ERV1 -399 464 5 3497 149 46 67 chr18 13237979 13238691 -73438857 - LTR1 LTR ERV1 -12 773 77 1608 141 23 64 chr18 13240353 13240846 -73436702 + MER51A LTR ERV1 1 634 0 474 308 47 12 chr18 13240848 13241020 -73436528 + MIR SINE MIR 85 262 0 2042 116 10 0 chr18 13241053 13241356 -73436192 - AluSx SINE Alu -6 306 1 29 0 0 0 chr18 13241765 13241794 -73435754 + AT_rich Low_complexity Low_complexity 1 29 0 428 303 19 19 chr18 13242075 13242230 -73435318 + MLT1J2 LTR MaLR 291 445 -5 280 350 83 0 chr18 13242305 13242425 -73435123 + MIR3 SINE MIR 52 181 -27 1848 131 0 42 chr18 13243104 13243410 -73434138 - AluSq SINE Alu -20 293 1 207 0 0 0 chr18 13243531 13243554 -73433994 + (T)n Simple_repeat Simple_repeat 1 23 0 391 232 17 30 chr18 13243567 13243758 -73433790 - L1MEc LINE L1 -4837 1643 1370 184 222 0 0 chr18 13243778 13243814 -73433734 - L2 LINE L2 0 3313 3278 303 335 26 48 chr18 13243909 13244136 -73433412 - L2 LINE L2 -222 3050 2829 236 325 61 31 chr18 13244159 13244322 -73433226 + L2 LINE L2 2244 2411 -903 286 324 34 17 chr18 13244377 13244553 -73432995 - L2 LINE L2 -586 2728 2550 183 80 0 0 chr18 13246457 13246482 -73431066 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 245 319 99 0 chr18 13246558 13246649 -73430899 + MIR3 SINE MIR 108 207 -1 2034 97 19 50 chr18 13247307 13247628 -73429920 + AluSq SINE Alu 1 311 -2 1836 137 29 0 chr18 13248471 13248749 -73428799 - AluSx SINE Alu -18 294 9 240 299 28 28 chr18 13250214 13250321 -73427227 + MER112 DNA MER1_type 65 171 -89 347 186 0 0 chr18 13250434 13250493 -73427055 - MER112 DNA MER1_type -182 78 20 742 291 9 5 chr18 13250680 13250900 -73426648 + MER58A DNA MER1_type 2 222 -2 447 309 221 4 chr18 13251157 13251429 -73426119 - LTR16A LTR ERVL 0 450 120 356 211 56 0 chr18 13251599 13251689 -73425859 - HERV16 LTR ERVL -73 4923 4829 378 347 17 11 chr18 13251997 13252173 -73425375 - ERVL LTR ERVL -767 4997 4821 342 178 82 0 chr18 13252174 13252247 -73425301 - MER20 DNA MER1_type -107 112 34 818 238 67 67 chr18 13253687 13253986 -73423562 + MLT1J2 LTR MaLR 151 449 -1 274 291 94 31 chr18 13255237 13255364 -73422184 - L2 LINE L2 -1 3271 3137 307 224 66 13 chr18 13256885 13256961 -73420587 + MLT1J LTR MaLR 52 131 -380 885 216 82 5 chr18 13257010 13257218 -73420330 - MER58A DNA MER1_type 0 224 1 374 266 124 0 chr18 13257242 13257355 -73420193 + MLT1J LTR MaLR 332 458 -53 1731 164 0 26 chr18 13257357 13257667 -73419881 - AluJo SINE Alu -8 304 3 1598 258 140 4 chr18 13257699 13258157 -73419391 + MLT1H1 LTR MaLR 1 520 -35 1004 178 64 74 chr18 13258712 13258846 -73418702 + MER33 DNA MER1_type 27 161 -2424 2112 104 0 0 chr18 13258846 13259133 -73418415 + AluSg SINE Alu 1 287 -23 244 64 43 0 chr18 13259133 13259180 -73418368 + (TA)n Simple_repeat Simple_repeat 2 50 0 1004 178 64 74 chr18 13259180 13259342 -73418206 + MER33 DNA MER1_type 159 321 -3 431 244 79 63 chr18 13259514 13259813 -73417735 + MLT1J2 LTR MaLR 96 447 -3 1320 189 33 56 chr18 13260951 13261257 -73416291 + MLT1A1 LTR MaLR 67 365 0 22 0 0 0 chr18 13261344 13261366 -73416182 + AT_rich Low_complexity Low_complexity 1 22 0 1408 285 100 43 chr18 13261383 13262005 -73415543 - MER21B LTR ERV1 -109 754 98 1953 101 0 98 chr18 13262017 13262364 -73415184 + AluSq SINE Alu 1 313 0 282 308 55 0 chr18 13262401 13262492 -73415056 - MER21B LTR ERV1 -767 96 1 21 0 0 0 chr18 13263104 13263125 -73414423 + AT_rich Low_complexity Low_complexity 1 21 0 5443 136 17 22 chr18 13263492 13264029 -73413519 - MER49 LTR ERV1 0 923 390 2261 95 0 0 chr18 13264029 13264333 -73413215 - AluSx SINE Alu -8 304 1 5443 136 17 22 chr18 13264333 13264722 -73412826 - MER49 LTR ERV1 -533 390 1 1370 213 0 17 chr18 13266332 13266628 -73410920 + AluJo SINE Alu 1 291 -21 237 253 80 0 chr18 13266897 13266972 -73410576 - L1M4 LINE L1 -2376 3770 3690 566 277 113 61 chr18 13266987 13267990 -73409558 - L1M4 LINE L1 -2607 3539 2485 2152 110 0 0 chr18 13268092 13268391 -73409157 - AluSx SINE Alu -4 308 10 619 277 41 41 chr18 13269327 13269569 -73407979 - LTR16C LTR ERVL 0 491 250 708 135 128 8 chr18 13270896 13271064 -73406484 - FRAM SINE Alu 0 184 1 803 210 90 10 chr18 13271316 13271516 -73406032 + AluJb SINE Alu 86 301 -11 349 245 137 0 chr18 13272184 13272286 -73405262 - MER46C DNA MER2_type -217 121 6 308 43 22 0 chr18 13272992 13273038 -73404510 + MADE1 DNA Mariner 1 47 -33 186 208 0 21 chr18 13273716 13273764 -73403784 - MER5B DNA MER1_type -48 130 84 271 293 0 75 chr18 13273796 13273902 -73403646 - MER5B DNA MER1_type -80 98 1 385 238 0 0 chr18 13274047 13274127 -73403421 + MER81 DNA DNA 2 81 -33 190 317 0 73 chr18 13274256 13274338 -73403210 - MIR SINE MIR -62 200 125 1815 195 9 66 chr18 13274377 13274802 -73402746 - MER57A LTR ERV1 -2 401 1 1022 226 14 10 chr18 13274802 13275010 -73402538 - MER57A-int LTR ERV1 0 7537 7329 421 209 85 73 chr18 13275010 13275187 -73402361 - LTR54B LTR ERV1 -319 179 1 4832 235 41 35 chr18 13275192 13275559 -73401989 - MER57A-int LTR ERV1 -401 7136 6773 1875 129 0 55 chr18 13275559 13275885 -73401663 + AluSx SINE Alu 1 308 -4 4832 235 41 35 chr18 13275885 13276822 -73400726 - MER57A-int LTR ERV1 -764 6773 5824 1716 216 65 44 chr18 13277124 13277366 -73400182 - MER57A-int LTR ERV1 -1709 5828 5570 273 29 0 0 chr18 13277366 13277400 -73400148 + (TA)n Simple_repeat Simple_repeat 2 35 0 1716 216 65 44 chr18 13277400 13277616 -73399932 - MER57A-int LTR ERV1 -1967 5570 5360 28133 74 3 2 chr18 13277621 13282116 -73395432 - L1PA6 LINE L1 -2 6152 1659 9737 194 46 4 chr18 13282108 13282324 -73395224 - L1PBa LINE L1 -1955 4907 4702 * 2723 96 0 0 chr18 13282324 13282679 -73394869 - THE1A LTR MaLR 0 355 1 9737 194 46 4 chr18 13282679 13287022 -73390526 - L1PBa LINE L1 -2160 4702 6 401 185 44 88 chr18 13287028 13287233 -73390315 - MER57A-int LTR ERV1 -2637 3694 3499 283 83 0 0 chr18 13287233 13287269 -73390279 - U2 snRNA snRNA -152 36 1 597 183 38 39 chr18 13287269 13287599 -73389949 - MER57A-int LTR ERV1 -2819 3512 1707 565 198 34 186 chr18 13287704 13287941 -73389607 - MER57A-int LTR ERV1 -2867 3464 3264 503 187 35 141 chr18 13287995 13288193 -73389355 - MER57A-int LTR ERV1 -3068 3263 3087 240 35 0 0 chr18 13288218 13288247 -73389301 + (CA)n Simple_repeat Simple_repeat 1 29 0 2225 126 3 0 chr18 13288343 13288652 -73388896 - AluSg SINE Alu 0 310 1 359 231 54 34 chr18 13288658 13288771 -73388777 - MER57A-int LTR ERV1 -4616 1982 1864 2223 171 7 62 chr18 13288771 13289222 -73388326 + MSTB LTR MaLR 1 426 0 359 231 54 34 chr18 13289222 13289255 -73388293 - MER57A-int LTR ERV1 -4734 1864 1833 316 216 0 49 chr18 13289282 13289384 -73388164 - MER57A-int LTR ERV1 -3934 1189 1093 326 269 58 0 chr18 13289398 13289502 -73388046 - MER34C LTR ERV1 -321 264 155 292 279 9 36 chr18 13289539 13289650 -73387898 - MER57A-int LTR ERV1 -3673 2658 2551 3237 234 34 48 chr18 13289755 13290608 -73386940 - MER57A-int LTR ERV1 -6695 842 2 1808 154 9 129 chr18 13290611 13291051 -73386497 - MER57A LTR ERV1 -16 387 1 190 282 94 24 chr18 13291422 13291507 -73386041 + L2 LINE L2 3169 3259 -54 2136 180 7 27 chr18 13292140 13292277 -73385271 + L1 LINE L1 3269 3407 -2739 2392 69 0 26 chr18 13292277 13292583 -73384965 + AluY SINE Alu 1 298 -13 2136 180 7 27 chr18 13292583 13292883 -73384665 + L1 LINE L1 3407 3697 -2449 239 296 99 28 chr18 13294510 13294652 -73382896 + MIR SINE MIR 36 187 -75 1668 169 83 19 chr18 13295149 13295511 -73382037 + MLT1B LTR MaLR 1 385 -5 628 150 71 0 chr18 13295546 13295659 -73381889 - LTR12 LTR ERV1 -228 486 366 266 265 0 0 chr18 13295664 13295732 -73381816 - LTR30 LTR ERV1 -102 620 553 788 179 52 42 chr18 13295733 13296008 -73381540 - LTR12 LTR ERV1 -406 2032 100 255 151 19 38 chr18 13296008 13296061 -73381487 - LTR30 LTR ERV1 -670 52 1 1168 223 109 40 chr18 13296209 13296639 -73380909 + MLT1C LTR MaLR 1 460 -7 2062 107 4 0 chr18 13297113 13297383 -73380165 + AluSx SINE Alu 1 271 -41 473 266 81 29 chr18 13298152 13298325 -73379223 + MIR SINE MIR 80 261 -1 1417 35 6 0 chr18 13298363 13298532 -73379016 + L1PA5 LINE L1 5984 6153 -1 556 200 7 69 chr18 13300184 13300301 -73377247 - MLT1A1 LTR MaLR -116 249 142 578 122 0 0 chr18 13300301 13300383 -73377165 - Tigger7 DNA MER2_type 0 2487 2406 228 293 12 0 chr18 13300529 13300611 -73376937 - L1MC4 LINE L1 -1346 6696 6614 180 0 0 0 chr18 13300611 13300631 -73376917 + (TA)n Simple_repeat Simple_repeat 2 21 0 1461 180 0 0 chr18 13302024 13302257 -73375291 - MLT1A1 LTR MaLR 0 365 133 2211 126 44 30 chr18 13302258 13302623 -73374925 - Tigger7 DNA MER2_type 0 2587 2218 4167 166 29 3 chr18 13302623 13303338 -73374210 - Tigger7 DNA MER2_type -1717 770 37 784 167 8 0 chr18 13303354 13303486 -73374062 - MLT1A1 LTR MaLR -232 133 1 213 175 35 0 chr18 13306327 13306384 -73371164 + (CA)n Simple_repeat Simple_repeat 2 60 0 3765 157 40 23 chr18 13307641 13308346 -73369202 + LTR62 LTR ERVK 1 717 -2 2339 117 0 0 chr18 13308543 13308851 -73368697 - AluSx SINE Alu -4 308 1 332 294 66 20 chr18 13309073 13309270 -73368278 - MIR SINE MIR -7 255 50 356 304 89 66 chr18 13309980 13310237 -73367311 - L2 LINE L2 -108 3164 2902 200 271 0 43 chr18 13310348 13310418 -73367130 + MIR SINE MIR 7 73 -189 194 0 39 0 chr18 13310419 13310445 -73367103 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 202 244 26 39 chr18 13310741 13310819 -73366729 - L2 LINE L2 -405 2908 2832 410 285 51 25 chr18 13310865 13311023 -73366525 - MER5B DNA MER1_type -16 162 1 1991 97 41 72 chr18 13311283 13311602 -73365946 + AluSq SINE Alu 1 309 -4 268 200 0 0 chr18 13311702 13311757 -73365791 - MER53 DNA DNA -1 188 134 237 290 110 0 chr18 13311909 13312009 -73365539 - L2 LINE L2 -957 2357 2247 287 241 161 0 chr18 13312096 13312183 -73365365 + MIR SINE MIR 46 146 -116 1499 193 132 38 chr18 13312206 13312599 -73364949 - MSTB2 LTR MaLR 0 457 28 1943 199 3 0 chr18 13312609 13312955 -73364593 - MER7A DNA MER2_type 0 346 2 201 237 0 0 chr18 13313515 13313574 -73363974 + (CACG)n Simple_repeat Simple_repeat 1 59 0 195 139 0 0 chr18 13316513 13316549 -73360999 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 1669 176 57 0 chr18 13316706 13316985 -73360563 + AluJb SINE Alu 1 295 -17 253 241 17 0 chr18 13317015 13317073 -73360475 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 314 257 37 46 chr18 13367473 13367582 -73309966 + MIR SINE MIR 117 224 -38 254 253 0 71 chr18 13367641 13367740 -73309808 - MER3 DNA MER1_type -6 203 112 1825 217 3 0 chr18 13367999 13368345 -73309203 + MER7A DNA MER2_type 2 346 0 8661 93 10 13 chr18 13368785 13369972 -73307576 + HERV9 LTR ERV1 815 1998 -6401 848 173 132 25 chr18 13370901 13371098 -73306450 + MER20 DNA MER1_type 1 218 -1 3232 210 39 16 chr18 13371717 13372487 -73305061 - L1M4 LINE L1 -795 5351 4564 371 275 16 95 chr18 13372510 13372699 -73304849 + MIR SINE MIR 73 246 -16 26 0 0 0 chr18 13372799 13372825 -73304723 + AT_rich Low_complexity Low_complexity 1 26 0 2111 136 0 0 chr18 13373544 13373852 -73303696 + AluSx SINE Alu 1 308 -4 185 300 86 0 chr18 13374013 13374083 -73303465 + L2 LINE L2 3238 3313 0 1588 84 31 22 chr18 13375129 13375356 -73302192 + MER30 DNA MER1_type 1 229 -1 2430 66 0 0 chr18 13376802 13377103 -73300445 + AluY SINE Alu 1 301 -10 1082 194 258 48 chr18 13377549 13377967 -73299581 + MLT2B2 LTR ERVL 6 511 -4 4083 164 14 17 chr18 13378041 13378765 -73298783 - MER72 LTR ERV1 0 722 1 302 352 19 86 chr18 13378765 13379021 -73298527 - L2 LINE L2 -39 3233 2995 2796 183 50 88 chr18 13379060 13379813 -73297735 - LTR8A LTR ERV1 -2 725 1 1823 170 22 92 chr18 13380000 13380488 -73297060 - MLT1D LTR MaLR -33 472 19 220 295 116 11 chr18 13380714 13380809 -73296739 - MIR SINE MIR -63 145 41 2273 80 6 55 chr18 13382039 13382351 -73295197 + AluSg SINE Alu 1 297 -13 297 290 43 0 chr18 13385045 13385138 -73292410 - L3 LINE CR1 -3 1574 1478 549 303 40 15 chr18 13385256 13385454 -73292094 - MIR SINE MIR -29 233 31 1699 146 29 13 chr18 13386340 13386649 -73290899 + L1MC2 LINE L1 6005 6318 -26 2181 104 0 57 chr18 13386660 13386978 -73290570 - AluSx SINE Alu -12 300 1 218 176 20 0 chr18 13387061 13387112 -73290436 + A-rich Low_complexity Low_complexity 2 53 0 403 248 65 78 chr18 13387673 13387826 -73289722 - MER91A DNA MER1_type -30 166 16 2187 73 43 27 chr18 13388145 13388445 -73289103 + AluSx SINE Alu 1 305 -7 2118 109 11 0 chr18 13388707 13388983 -73288565 + AluSx SINE Alu 1 279 -33 216 0 0 0 chr18 13388983 13389007 -73288541 + (CA)n Simple_repeat Simple_repeat 1 24 0 738 276 49 4 chr18 13389358 13389583 -73287965 + HAL1b LINE L1 407 641 -707 372 179 84 32 chr18 13389605 13389700 -73287848 + HAL1b LINE L1 432 531 -817 488 247 98 6 chr18 13389703 13389877 -73287671 + HAL1b LINE L1 614 803 -545 1750 169 7 16 chr18 13390046 13390353 -73287195 + AluJo SINE Alu 1 304 -8 853 150 28 66 chr18 13390369 13390492 -73287056 + MER69 DNA AcHobo 2321 2434 -92 2500 77 0 0 chr18 13390492 13390792 -73286756 - AluSc SINE Alu -9 300 1 853 150 28 66 chr18 13390792 13390881 -73286667 + MER69 DNA AcHobo 2434 2525 -1 225 0 0 0 chr18 13391755 13391780 -73285768 + (T)n Simple_repeat Simple_repeat 1 25 0 2102 112 0 11 chr18 13392328 13392654 -73284894 + AluSx SINE Alu 1 323 0 1997 162 3 0 chr18 13392806 13393102 -73284446 + AluSx SINE Alu 1 297 -15 998 248 85 27 chr18 13393748 13394109 -73283439 - MLT1C LTR MaLR -126 379 1 3126 75 16 2 chr18 13394259 13394683 -73282865 - L1PA13 LINE L1 -8 6155 5726 297 180 0 0 chr18 13394683 13394733 -73282815 + L1PA15-16 LINE L1 2473 2522 -4327 2437 213 77 20 chr18 13394733 13395165 -73282383 + MER69 DNA AcHobo 1839 2245 -281 1726 173 7 16 chr18 13395165 13395472 -73282076 + AluJo SINE Alu 1 304 -8 2437 213 77 20 chr18 13395472 13395600 -73281948 + MER69 DNA AcHobo 2245 2364 -162 2486 85 0 0 chr18 13395600 13395907 -73281641 - AluSc SINE Alu -2 307 1 2437 213 77 20 chr18 13395907 13395994 -73281554 + MER69 DNA AcHobo 2364 2524 -2 183 100 0 0 chr18 13397123 13397153 -73280395 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 37859 34 26 1 chr18 13397153 13402557 -73274991 - L1PA2 LINE L1 -24 6131 592 230 278 31 41 chr18 13403906 13404003 -73273545 + L2 LINE L2 1875 1970 -1344 2101 135 3 0 chr18 13404261 13404557 -73272991 - AluSx SINE Alu -15 297 1 237 287 147 31 chr18 13405645 13405774 -73271774 + L2 LINE L2 3125 3268 -4 2341 112 0 0 chr18 13405814 13406126 -73271422 - AluSx SINE Alu 0 312 1 249 272 98 0 chr18 13406173 13406265 -73271283 - L1ME LINE L1 -422 5699 5599 28 0 0 0 chr18 13406750 13406778 -73270770 + AT_rich Low_complexity Low_complexity 1 28 0 1756 120 0 8 chr18 13407432 13407698 -73269850 - AluSx SINE Alu 0 308 45 227 235 0 0 chr18 13410442 13410493 -73267055 - MER113 DNA MER1_type? -464 57 7 252 0 0 0 chr18 13411420 13411448 -73266100 + (A)n Simple_repeat Simple_repeat 1 28 0 2272 96 6 3 chr18 13412675 13412987 -73264561 + AluSq SINE Alu 1 313 0 386 297 69 24 chr18 13413351 13413473 -73264075 + MLT1J2 LTR MaLR 75 190 -260 899 158 175 0 chr18 13413473 13413650 -73263898 + MER3 DNA MER1_type 1 208 -1 386 297 69 24 chr18 13413650 13413773 -73263775 + MLT1J2 LTR MaLR 190 331 -119 245 180 20 20 chr18 13413815 13413865 -73263683 + MLT1I LTR MaLR 354 403 -6 185 324 14 0 chr18 13415874 13415945 -73261603 + MIR3 SINE MIR 85 156 -52 303 289 83 39 chr18 13416042 13416222 -73261326 - L2 LINE L2 -16 3297 3110 518 278 17 17 chr18 13417725 13417898 -73259650 - MIR SINE MIR -56 206 34 1873 178 0 0 chr18 13417910 13418208 -73259340 - AluJo SINE Alu -13 299 2 539 349 73 19 chr18 13418257 13418844 -73258704 - L2 LINE L2 -816 2498 1880 271 305 28 43 chr18 13418858 13418999 -73258549 - L2 LINE L2 -202 3070 2932 555 252 56 66 chr18 13419289 13419626 -73257922 - MLT1J2 LTR MaLR -10 440 71 26 30 0 0 chr18 13419682 13419715 -73257833 + AT_rich Low_complexity Low_complexity 1 33 0 466 294 80 56 chr18 13420333 13420710 -73256838 + L2 LINE L2 2821 3206 -107 342 316 40 20 chr18 13420771 13420923 -73256625 - L1ME LINE L1 -462 5659 5505 12129 124 36 7 chr18 13421406 13423290 -73254258 - Tigger1 DNA MER2_type 0 2418 480 614 179 23 6 chr18 13423290 13423463 -73254085 + CT-rich Low_complexity Low_complexity 4 179 0 484 227 0 0 chr18 13423481 13423578 -73253970 - AluJo SINE Alu -94 218 122 2776 154 30 7 chr18 13423584 13424046 -73253502 - Tigger1 DNA MER2_type -1945 473 1 2282 116 0 0 chr18 13425516 13425827 -73251721 - AluY SINE Alu 0 311 1 28 0 0 0 chr18 13426404 13426432 -73251116 + AT_rich Low_complexity Low_complexity 1 28 0 772 177 0 0 chr18 13426434 13426558 -73250990 - FLAM_A SINE Alu -5 128 5 1661 190 21 0 chr18 13426570 13426860 -73250688 - AluJo SINE Alu -16 296 1 288 203 43 0 chr18 13428557 13428626 -73248922 + LTR67 LTR ERVL 481 552 -5 1677 156 17 22 chr18 13430976 13431324 -73246224 - MER4A LTR ERV1 0 664 261 633 103 21 10 chr18 13431324 13431421 -73246127 - MER4A LTR ERV1 -566 98 1 185 133 467 0 chr18 13431601 13431676 -73245872 - MER5A DNA MER1_type -29 160 51 1308 294 67 52 chr18 13433339 13434159 -73243389 - HAL1 LINE L1 -247 2260 1429 248 302 0 0 chr18 13435204 13435267 -73242281 + L2 LINE L2 3206 3268 -4 465 202 20 20 chr18 13437048 13437147 -73240401 + MIR SINE MIR 65 163 -99 201 182 0 23 chr18 13437926 13437970 -73239578 + CT-rich Low_complexity Low_complexity 3 45 0 3224 112 27 24 chr18 13438009 13438520 -73239028 - LTR10D LTR ERV1 0 513 1 810 238 54 46 chr18 13439495 13439735 -73237813 - L1MB7 LINE L1 0 6184 5943 208 250 145 0 chr18 13439781 13439857 -73237691 + L2 LINE L2 3183 3269 -44 321 272 75 64 chr18 13441107 13441280 -73236268 + MLT1J LTR MaLR 36 210 -301 186 43 0 0 chr18 13441484 13441507 -73236041 + (CGGGGG)n Simple_repeat Simple_repeat 2 24 0 2192 92 0 16 chr18 13441595 13441899 -73235649 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr18 13442400 13442421 -73235127 + AT_rich Low_complexity Low_complexity 1 21 0 326 270 61 17 chr18 13443387 13443502 -73234046 + MIR SINE MIR 40 159 -103 326 269 0 7 chr18 13444009 13444150 -73233398 + (CA)n Simple_repeat Simple_repeat 2 141 0 392 242 91 19 chr18 13445009 13445146 -73232402 + MIR3 SINE MIR 21 169 -39 1443 151 24 28 chr18 13445248 13445499 -73232049 + AluJb SINE Alu 17 266 -46 2135 186 13 8 chr18 13445542 13445939 -73231609 - MER57A LTR ERV1 -4 399 1 253 309 36 54 chr18 13446133 13446301 -73231247 - MIR SINE MIR -75 187 23 249 342 108 8 chr18 13447086 13447206 -73230342 - MIR3 SINE MIR -64 144 13 270 0 0 0 chr18 13447639 13447669 -73229879 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 624 311 231 20 chr18 13447727 13448647 -73228901 + L2 LINE L2 1774 2888 -426 525 330 49 36 chr18 13448732 13448956 -73228592 - MIR SINE MIR -13 249 23 251 272 161 25 chr18 13449069 13449231 -73228317 - L3 LINE CR1 -173 1404 1221 215 348 33 11 chr18 13449357 13449449 -73228099 - MIR SINE MIR -92 116 23 274 291 127 9 chr18 13450225 13450335 -73227213 - L2 LINE L2 -7 3306 3184 344 227 103 0 chr18 13450646 13450743 -73226805 - L1ME3A LINE L1 -5 6165 6059 2649 181 27 56 chr18 13450820 13451515 -73226033 - L1M4 LINE L1 -1066 5080 4406 1493 184 84 51 chr18 13452073 13452487 -73225061 + MSTC LTR MaLR 1 428 0 353 375 39 62 chr18 13452502 13452918 -73224630 - L2 LINE L2 -5 3267 2862 1134 291 58 13 chr18 13453182 13453564 -73223984 + MLT1J LTR MaLR 111 509 -2 329 208 77 62 chr18 13455136 13455266 -73222282 - MIR SINE MIR -25 237 106 324 0 0 0 chr18 13456334 13456370 -73221178 + (CA)n Simple_repeat Simple_repeat 2 37 0 293 340 0 0 chr18 13456409 13456509 -73221039 - MIR SINE MIR -11 251 152 231 313 12 12 chr18 13457582 13457662 -73219886 - L2 LINE L2 0 3272 3193 692 292 76 44 chr18 13457975 13458290 -73219258 + MLT1I LTR MaLR 65 389 -20 1897 146 3 7 chr18 13458603 13458950 -73218598 + AluSq SINE Alu 1 313 0 1933 101 39 11 chr18 13460887 13461173 -73216375 + AluSg SINE Alu 1 294 -16 2362 54 7 0 chr18 13461412 13461708 -73215840 - AluY SINE Alu -13 298 1 413 284 212 4 chr18 13461740 13462018 -73215530 + L1MC4a LINE L1 7486 7994 -1 2560 136 3 13 chr18 13462943 13463333 -73214215 + MER4B LTR ERV1 1 386 -224 201 195 37 98 chr18 13463395 13463477 -73214071 + MIR3 SINE MIR 132 208 0 541 260 100 30 chr18 13464262 13464462 -73213086 + MLT1I LTR MaLR 196 409 0 689 294 116 35 chr18 13464745 13465440 -73212108 - L2 LINE L2 -122 3191 2433 342 300 39 50 chr18 13466288 13466468 -73211080 + MER5A DNA MER1_type 7 184 -5 846 275 22 9 chr18 13467357 13467586 -73209962 - MIR SINE MIR -6 256 25 1981 125 0 4 chr18 13469754 13470035 -73207513 - AluSx SINE Alu -14 298 19 568 118 11 0 chr18 13470870 13470963 -73206585 - AluSq SINE Alu -4 309 216 925 91 56 14 chr18 13470964 13471107 -73206441 - AluSq SINE Alu -158 155 7 336 271 164 0 chr18 13471136 13471258 -73206290 + MIR SINE MIR 118 259 -3 1491 206 91 19 chr18 13471271 13471635 -73205913 - MLT1B LTR MaLR 0 390 1 223 273 27 82 chr18 13471702 13471812 -73205736 - MIR SINE MIR -63 145 42 354 267 12 0 chr18 13472103 13472189 -73205359 + MIR SINE MIR 64 150 -58 822 136 0 16 chr18 13473086 13473243 -73204305 + FLAM_C SINE Alu 2 133 0 2198 101 0 19 chr18 13473365 13473683 -73203865 + AluSx SINE Alu 1 312 0 203 275 58 14 chr18 13474592 13474661 -73202887 + MIR SINE MIR 145 216 -46 2386 65 0 0 chr18 13474673 13474967 -73202581 + AluSc SINE Alu 1 294 -15 334 340 61 14 chr18 13474968 13475115 -73202433 + L2 LINE L2 3110 3263 -9 238 374 46 66 chr18 13476100 13476402 -73201146 + L2 LINE L2 2977 3272 0 333 319 113 42 chr18 13476691 13476904 -73200644 + L3 LINE CR1 1200 1427 -150 219 342 45 27 chr18 13478414 13478525 -73199023 + MIR SINE MIR 116 228 -34 2192 85 0 7 chr18 13478724 13479019 -73198529 + AluSq SINE Alu 5 297 -16 784 169 23 0 chr18 13480974 13481104 -73196444 + AluJo/FLAM SINE Alu 1 133 -169 1510 148 0 70 chr18 13481106 13481390 -73196158 + AluJb SINE Alu 49 312 0 1898 136 10 33 chr18 13483395 13483696 -73193852 - AluJb SINE Alu -18 294 1 2126 123 19 48 chr18 13486180 13486555 -73190993 + THE1B LTR MaLR 1 364 0 326 363 50 0 chr18 13487288 13487528 -73190020 + L2 LINE L2 2232 2483 -831 2132 125 0 3 chr18 13487951 13488248 -73189300 + AluSx SINE Alu 1 296 -16 203 327 27 9 chr18 13489825 13489935 -73187613 + MIR SINE MIR 117 228 -34 250 244 24 24 chr18 13490278 13490360 -73187188 - HsTC2 DNA Tc2 -7 1891 1810 248 314 8 17 chr18 13491047 13491165 -73186383 + (CA)n Simple_repeat Simple_repeat 2 118 0 285 75 0 0 chr18 13491452 13491492 -73186056 + (CA)n Simple_repeat Simple_repeat 1 40 0 234 330 66 0 chr18 13492273 13492364 -73185184 - MER5A DNA MER1_type -4 185 89 1100 212 76 36 chr18 13493049 13493379 -73184169 + MER2 DNA MER2_type 2 344 0 1058 147 25 108 chr18 13493472 13493751 -73183797 + L1MB8 LINE L1 5920 6175 -3 252 0 0 0 chr18 13494012 13494040 -73183508 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 894 248 161 28 chr18 13496243 13496715 -73180833 + MLT1H LTR MaLR 9 548 -1 394 244 171 40 chr18 13496962 13497138 -73180410 + MIR SINE MIR 37 235 -27 240 286 99 87 chr18 13497314 13497885 -73179663 - L2 LINE L2 -2 3270 2717 182 217 0 0 chr18 13498007 13498053 -73179495 + L2 LINE L2 3268 3313 0 339 252 72 27 chr18 13500367 13500478 -73177070 - L2 LINE L2 -4 3309 3194 339 242 40 20 chr18 13500527 13500626 -73176922 + L1ME3A LINE L1 6042 6142 -28 472 238 32 8 chr18 13501429 13501555 -73175993 + L1MEc LINE L1 49 177 -6219 380 262 52 43 chr18 13501557 13501767 -73175781 + MER89 LTR ERV1 1 212 -347 240 303 26 33 chr18 13501858 13502010 -73175538 + MER89 LTR ERV1 69 219 -340 * 266 246 68 71 chr18 13501985 13502199 -73175349 + MER89 LTR ERV1 59 239 -320 2367 125 97 15 chr18 13502234 13502625 -73174923 + MSTA LTR MaLR 1 423 -5 938 219 24 5 chr18 13502613 13502818 -73174730 + MER89 LTR ERV1 186 394 -165 * 552 294 20 20 chr18 13502859 13503063 -73174485 + L1MEc LINE L1 180 383 -6013 263 157 39 0 chr18 13503086 13503137 -73174411 - LTR16C LTR ERVL -152 339 287 523 254 29 74 chr18 13503297 13503739 -73173809 - L1 LINE L1 -2159 3987 3579 2437 223 76 24 chr18 13503936 13504739 -73172809 - Zaphod DNA AcHobo -186 3845 3001 1706 108 0 0 chr18 13505026 13505249 -73172299 - AluSg/x SINE Alu -21 291 69 3234 231 114 56 chr18 13505335 13505841 -73171707 - Zaphod DNA AcHobo -2360 1671 1196 2286 104 0 3 chr18 13505841 13506140 -73171408 - AluSg SINE Alu -12 298 1 3234 231 114 56 chr18 13506140 13506794 -73170754 - Zaphod DNA AcHobo -2835 1196 410 1978 163 0 16 chr18 13506794 13507107 -73170441 + AluSx SINE Alu 1 308 -4 3234 231 114 56 chr18 13507107 13507367 -73170181 - Zaphod DNA AcHobo -3621 410 167 348 267 46 46 chr18 13507400 13507580 -73169968 + L1M4 LINE L1 3176 3358 -2788 2205 134 129 5 chr18 13507580 13507961 -73169587 + MSTA LTR MaLR 1 428 0 348 267 46 46 chr18 13507961 13508020 -73169528 + L1M4 LINE L1 3357 3415 -2731 27 0 0 0 chr18 13508256 13508283 -73169265 + AT_rich Low_complexity Low_complexity 1 27 0 1847 144 60 41 chr18 13508629 13508997 -73168551 - THE1C LTR MaLR 0 375 1 480 18 0 0 chr18 13509051 13509108 -73168440 + (TC)n Simple_repeat Simple_repeat 2 58 0 315 0 0 0 chr18 13509107 13509142 -73168406 + (TA)n Simple_repeat Simple_repeat 2 36 0 * 742 304 90 56 chr18 13509295 13509870 -73167678 - L1ME LINE L1 -5282 788 183 2571 238 72 0 chr18 13509870 13510480 -73167068 + MLT1E1 LTR MaLR 1 654 0 742 304 90 56 chr18 13510480 13510602 -73166946 - L1ME LINE L1 -5887 183 67 355 181 0 32 chr18 13512743 13512837 -73164711 + GA-rich Low_complexity Low_complexity 3 93 0 201 154 0 0 chr18 13513351 13513390 -73164158 + GA-rich Low_complexity Low_complexity 1 39 0 800 198 20 6 chr18 13513414 13513767 -73163781 + GA-rich Low_complexity Low_complexity 1 358 0 249 354 137 27 chr18 13517092 13517868 -73159680 + L2 LINE L2 1868 2728 -586 2236 121 0 0 chr18 13518303 13518609 -73158939 - AluSx SINE Alu -6 306 1 310 270 51 58 chr18 13519830 13519967 -73157581 + MIR SINE MIR 33 168 -94 1041 243 78 14 chr18 13520303 13520599 -73156949 + MER58B DNA MER1_type 27 341 0 257 189 0 0 chr18 13520611 13520661 -73156887 + MIR SINE MIR 97 141 -67 396 300 103 21 chr18 13521144 13521434 -73156114 - MLT1H LTR MaLR -184 365 52 210 71 0 0 chr18 13523447 13523475 -73154073 + (T)n Simple_repeat Simple_repeat 1 28 0 482 334 96 17 chr18 13524073 13524429 -73153119 + L3 LINE CR1 1164 1547 -30 279 272 117 19 chr18 13526143 13526305 -73151243 + MIR SINE MIR 20 197 -65 448 282 29 18 chr18 13526378 13526548 -73151000 - MIR SINE MIR -13 249 78 466 304 95 21 chr18 13526661 13526944 -73150604 + MARNA DNA Mariner 183 486 -100 4932 192 40 11 chr18 13527156 13527472 -73150076 - L1MA9 LINE L1 -41 6271 5966 226 0 59 0 chr18 13527472 13527506 -73150042 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 4932 192 40 11 chr18 13527506 13528891 -73148657 - L1MA9 LINE L1 -346 5966 4515 455 198 24 79 chr18 13528891 13529017 -73148531 + MER69A DNA AcHobo 13 131 -46 195 246 0 16 chr18 13529184 13529245 -73148303 - MIR SINE MIR -46 216 157 197 196 59 20 chr18 13529447 13529498 -73148050 - MIR SINE MIR -143 119 67 190 282 13 13 chr18 13529548 13529626 -73147922 - MIR3 SINE MIR -53 155 78 385 330 24 15 chr18 13529691 13529897 -73147651 + MIR SINE MIR 31 238 -24 283 280 16 40 chr18 13533741 13533866 -73143682 - L3 LINE CR1 -193 1384 1263 458 296 98 37 chr18 13534282 13534610 -73142938 - L1ME LINE L1 -527 5635 5288 314 240 117 39 chr18 13534629 13534783 -73142765 - L1 LINE L1 -885 5261 5096 393 276 0 0 chr18 13534803 13534901 -73142647 - U13 snRNA snRNA -6 98 1 382 232 12 0 chr18 13535082 13535164 -73142384 - MER63 DNA MER1_type 0 1060 978 320 289 84 62 chr18 13535288 13536011 -73141537 - L1 LINE L1 -1251 4895 4157 1520 270 83 34 chr18 13536063 13536946 -73140602 + L1M4 LINE L1 1115 2200 -4625 1805 148 39 0 chr18 13536946 13537229 -73140319 + AluSx SINE Alu 1 294 -18 1520 270 83 34 chr18 13537229 13537412 -73140136 + L1M4 LINE L1 2200 2373 -4452 276 111 0 0 chr18 13537431 13537476 -73140072 + (TG)n Simple_repeat Simple_repeat 2 46 0 5653 202 62 31 chr18 13537481 13539247 -73138301 + L1MDa LINE L1 1052 2761 -3779 4574 122 34 71 chr18 13539247 13540062 -73137486 - LTR1 LTR ERV1 0 785 1 5653 202 62 31 chr18 13540062 13540275 -73137273 + L1MDa LINE L1 2761 2966 -3574 1845 176 59 39 chr18 13540275 13540662 -73136886 + MSTD LTR MaLR 2 396 0 5653 202 62 31 chr18 13540662 13540987 -73136561 + L1MDa LINE L1 2966 3427 -3113 2323 92 3 0 chr18 13541613 13541918 -73135630 + AluY SINE Alu 1 306 -5 234 0 0 0 chr18 13543879 13543905 -73133643 + (CA)n Simple_repeat Simple_repeat 2 27 0 24 0 0 0 chr18 13544313 13544337 -73133211 + AT_rich Low_complexity Low_complexity 1 24 0 2041 154 39 6 chr18 13544367 13544704 -73132844 + MER7A DNA MER2_type 1 346 0 1051 306 32 16 chr18 13545726 13546164 -73131384 + L1MC/D LINE L1 5353 5797 -2011 285 254 103 8 chr18 13546498 13546624 -73130924 + MER117 DNA MER1_type 20 157 -40 262 255 0 0 chr18 13546630 13546681 -73130867 + G-rich Low_complexity Low_complexity 5 55 0 457 77 0 0 chr18 13547528 13547593 -73129955 - L1PA13 LINE L1 -5 6158 6094 22 0 0 0 chr18 13552140 13552162 -73125386 + AT_rich Low_complexity Low_complexity 1 22 0 627 293 45 12 chr18 13552612 13552854 -73124694 + MIR SINE MIR 3 252 -10 215 350 17 17 chr18 13553671 13553791 -73123757 - MIR SINE MIR -123 139 20 689 210 0 22 chr18 13554251 13554389 -73123159 + AluJo SINE Alu 2 136 -176 1008 269 18 14 chr18 13554569 13554844 -73122704 - MLT1E3 LTR MaLR -23 601 326 233 291 0 0 chr18 13556141 13556196 -73121352 - MIR SINE MIR -21 241 187 269 322 27 2 chr18 13556657 13556789 -73120759 - MIR SINE MIR -67 141 6 266 335 74 6 chr18 13556763 13556939 -73120609 - L3 LINE CR1 -160 1417 1230 * 2323 110 0 0 chr18 13557014 13557314 -73120234 - AluSx SINE Alu -7 305 6 1766 186 3 0 chr18 13557350 13557645 -73119903 + AluJb SINE Alu 5 300 -12 221 193 0 18 chr18 13558328 13558385 -73119163 + (CTTAT)n Simple_repeat Simple_repeat 4 59 0 2233 136 0 0 chr18 13559899 13560207 -73117341 + AluSx SINE Alu 1 308 -4 1578 84 35 22 chr18 13561484 13561710 -73115838 + MER30 DNA MER1_type 1 229 -1 225 273 0 0 chr18 13562617 13562672 -73114876 - MER112 DNA MER1_type -189 71 17 2547 67 0 0 chr18 13563155 13563454 -73114094 + AluY SINE Alu 1 299 -12 1056 199 266 42 chr18 13563912 13564318 -73113230 + MLT2B2 LTR ERVL 15 511 -4 4067 164 14 17 chr18 13564392 13565116 -73112432 - MER72 LTR ERV1 0 722 1 236 347 20 88 chr18 13565121 13565372 -73112176 - L2 LINE L2 -44 3228 2995 2982 178 47 84 chr18 13565411 13566164 -73111384 - LTR8A LTR ERV1 -2 725 1 1840 168 22 92 chr18 13566351 13566839 -73110709 - MLT1D LTR MaLR -33 472 19 220 295 116 11 chr18 13567065 13567160 -73110388 - MIR SINE MIR -63 145 41 2265 80 6 55 chr18 13568390 13568701 -73108847 + AluSg SINE Alu 1 296 -14 198 0 0 0 chr18 13570233 13570255 -73107293 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 297 290 43 0 chr18 13571395 13571488 -73106060 - L3 LINE CR1 -3 1574 1478 549 303 40 15 chr18 13571606 13571804 -73105744 - MIR SINE MIR -29 233 31 1699 146 29 13 chr18 13572690 13572999 -73104549 + L1MC2 LINE L1 6005 6318 -26 2181 104 0 57 chr18 13573010 13573328 -73104220 - AluSx SINE Alu -12 300 1 218 176 20 0 chr18 13573411 13573462 -73104086 + A-rich Low_complexity Low_complexity 2 53 0 403 248 65 78 chr18 13574023 13574176 -73103372 - MER91A DNA MER1_type -30 166 16 2204 73 43 26 chr18 13574495 13574797 -73102751 + AluSx SINE Alu 1 307 -5 2118 109 11 0 chr18 13575059 13575335 -73102213 + AluSx SINE Alu 1 279 -33 216 0 0 0 chr18 13575335 13575359 -73102189 + (CA)n Simple_repeat Simple_repeat 1 24 0 1088 259 75 17 chr18 13575530 13575932 -73101616 + HAL1b LINE L1 217 641 -707 400 168 84 32 chr18 13575954 13576049 -73101499 + HAL1b LINE L1 432 531 -817 473 253 98 6 chr18 13576052 13576226 -73101322 + HAL1b LINE L1 614 803 -545 387 264 39 32 chr18 13576235 13576390 -73101158 + HAL1b LINE L1 831 986 -362 525 135 0 0 chr18 13576396 13576470 -73101078 + AluS SINE Alu 2 75 -238 237 205 51 13 chr18 13578410 13578488 -73099060 + MIR SINE MIR 63 143 -65 2046 117 4 4 chr18 13578763 13579044 -73098504 + AluSx SINE Alu 2 282 -30 376 198 125 0 chr18 13579225 13579321 -73098227 - MER81 DNA DNA -3 111 4 611 199 143 6 chr18 13579468 13579629 -73097919 + MER5A DNA MER1_type 1 183 -6 1728 148 29 0 chr18 13581815 13582093 -73095455 + L1PA15 LINE L1 5865 6150 -15 1477 216 131 104 chr18 13582729 13583696 -73093852 - Charlie7 DNA MER1_type -131 2481 1489 1855 144 47 0 chr18 13583717 13584015 -73093533 + AluSx SINE Alu 1 312 0 401 262 105 12 chr18 13584183 13584355 -73093193 - Charlie7 DNA MER1_type -2420 192 5 403 238 73 85 chr18 13585572 13585808 -73091740 - MIR SINE MIR -17 245 3 451 267 108 82 chr18 13586075 13586465 -73091083 + LTR67 LTR ERVL 2 401 -156 248 362 52 0 chr18 13586660 13586776 -73090772 - MIR SINE MIR -41 221 100 1803 144 24 13 chr18 13586780 13587078 -73090470 + AluSx SINE Alu 2 302 -10 185 233 0 17 chr18 13589344 13589404 -73088144 + G-rich Low_complexity Low_complexity 5 63 0 232 261 0 46 chr18 13590224 13590289 -73087259 + L2 LINE L2 3252 3313 0 258 347 10 10 chr18 13590530 13590628 -73086920 - MIR SINE MIR -163 99 2 1366 146 39 35 chr18 13593318 13593572 -73083976 - AluJo SINE Alu -11 301 47 297 256 110 27 chr18 13594366 13594486 -73083062 + MIR SINE MIR 32 166 -46 967 194 47 30 chr18 13594680 13594912 -73082636 - MER106A DNA MER1_type 0 236 1 569 207 143 7 chr18 13594958 13595098 -73082450 - MIR SINE MIR -69 193 35 226 212 9 80 chr18 13599272 13599385 -73078163 + G-rich Low_complexity Low_complexity 3 107 0 22 35 0 0 chr18 13599420 13599449 -73078099 + GC_rich Low_complexity Low_complexity 1 29 0 30 45 0 0 chr18 13599588 13599632 -73077916 + GC_rich Low_complexity Low_complexity 1 44 0 22 35 0 0 chr18 13601425 13601454 -73076094 + AT_rich Low_complexity Low_complexity 1 29 0 232 265 0 0 chr18 13601855 13601904 -73075644 + (TATG)n Simple_repeat Simple_repeat 1 49 0 216 188 21 42 chr18 13604004 13604052 -73073496 - L2 LINE L2 -3 3310 3264 216 0 0 0 chr18 13604226 13604250 -73073298 + (CA)n Simple_repeat Simple_repeat 1 24 0 1914 91 0 55 chr18 13605143 13605451 -73072097 + AluSx SINE Alu 1 291 -21 305 123 70 18 chr18 13605560 13605617 -73071931 + L2 LINE L2 3254 3313 0 637 164 7 7 chr18 13607289 13607435 -73070113 + CT-rich Low_complexity Low_complexity 4 149 0 1206 81 0 0 chr18 13607440 13607612 -73069936 + (TTCC)n Simple_repeat Simple_repeat 3 174 0 317 325 60 20 chr18 13607765 13607916 -73069632 + L2 LINE L2 2607 2763 -551 390 21 0 0 chr18 13609223 13609270 -73068278 + (CA)n Simple_repeat Simple_repeat 2 48 0 1857 148 7 0 chr18 13609334 13609632 -73067916 - AluJo SINE Alu -12 300 1 328 303 10 0 chr18 13609931 13610030 -73067518 - MIR SINE MIR -88 174 75 1477 241 50 97 chr18 13610033 13610789 -73066759 + HsTC2 DNA Tc2 4 1894 -4 22 35 0 0 chr18 13612250 13612279 -73065269 + AT_rich Low_complexity Low_complexity 1 29 0 187 338 42 14 chr18 13612289 13612360 -73065188 + L2 LINE L2 3190 3262 -10 319 284 15 44 chr18 13613090 13613203 -73064345 + MIR SINE MIR 45 162 -46 590 307 139 44 chr18 13614400 13615140 -73062408 - L2 LINE L2 -5 3308 2493 949 255 53 3 chr18 13616108 13616356 -73061192 + MIR SINE MIR 2 252 -10 263 293 173 33 chr18 13617157 13617307 -73060241 + MIR3 SINE MIR 38 208 0 2153 80 13 7 chr18 13618836 13619136 -73058412 - AluSq SINE Alu -11 302 1 309 288 68 17 chr18 13619877 13619995 -73057553 + MIR SINE MIR 61 184 -78 343 229 0 83 chr18 13620302 13620398 -73057150 + L1MC4a LINE L1 5858 5945 -1863 1335 211 54 37 chr18 13623296 13623646 -73053902 - MLT1A1 LTR MaLR 0 365 10 203 218 115 26 chr18 13624556 13624634 -73052914 + MIR SINE MIR 58 142 -120 1570 118 0 111 chr18 13625517 13625823 -73051725 + AluJb SINE Alu 29 300 -12 26 0 0 0 chr18 13625841 13625867 -73051681 + AT_rich Low_complexity Low_complexity 1 26 0 3247 177 69 26 chr18 13625872 13626600 -73050948 + L1MB2 LINE L1 5413 6171 0 388 285 62 14 chr18 13627949 13628093 -73049455 - MIR SINE MIR -74 188 38 4110 144 54 8 chr18 13629327 13629876 -73047672 - L1MB3 LINE L1 -3 6180 5589 264 77 0 0 chr18 13629876 13629915 -73047633 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 4110 144 54 8 chr18 13629915 13630087 -73047461 - L1MB3 LINE L1 -594 5589 5426 1914 158 0 7 chr18 13630980 13631283 -73046265 + AluJo SINE Alu 1 301 -11 2330 88 3 0 chr18 13634329 13634623 -73042925 + AluY SINE Alu 1 295 -16 261 282 13 0 chr18 13634951 13635029 -73042519 + (TA)n Simple_repeat Simple_repeat 1 79 0 382 278 117 35 chr18 13639388 13639733 -73037815 + LTR33 LTR ERVL 8 456 -65 5036 158 41 2 chr18 13640331 13641265 -73036283 - L1MB1 LINE L1 0 6168 5191 4072 197 22 27 chr18 13641263 13642218 -73035330 + L1 LINE L1 4414 5363 -783 * 363 289 47 16 chr18 13643236 13643364 -73034184 + MIR SINE MIR 13 144 -118 414 281 180 0 chr18 13643481 13643620 -73033928 + MER5A DNA MER1_type 4 167 -22 35 71 0 0 chr18 13643760 13643830 -73033718 + AT_rich Low_complexity Low_complexity 1 70 0 11560 211 58 46 chr18 13644667 13645630 -73031918 - L1MB5 LINE L1 -3 6669 5718 1535 154 13 64 chr18 13645630 13645942 -73031606 - AluJb SINE Alu -16 296 1 11560 211 58 46 chr18 13645942 13649947 -73027601 - L1MB5 LINE L1 -954 5718 1760 2075 119 44 0 chr18 13649947 13650241 -73027307 - AluSq SINE Alu -6 307 1 11560 211 58 46 chr18 13650241 13650338 -73027210 - L1MB5 LINE L1 -4912 1760 1666 7945 88 6 152 chr18 13650338 13651900 -73025648 - SVA Other Other 0 1386 53 11560 211 58 46 chr18 13651900 13653410 -73024138 - L1MB5 LINE L1 -5006 1666 5 1525 144 121 20 chr18 13654112 13654467 -73023081 + MSTB1 LTR MaLR 1 432 0 291 361 51 19 chr18 13654652 13654810 -73022738 - L3 LINE CR1 -27 1550 1388 509 169 6 33 chr18 13657283 13657466 -73020082 + (TG)n Simple_repeat Simple_repeat 2 179 0 1953 163 3 6 chr18 13658135 13658612 -73018936 + AluJo SINE Alu 1 476 0 296 313 26 17 chr18 13658764 13658879 -73018669 + L2 LINE L2 3137 3252 -20 22 56 0 0 chr18 13659604 13659640 -73017908 + AT_rich Low_complexity Low_complexity 1 36 0 190 324 28 41 chr18 13660963 13661108 -73016440 - L2 LINE L2 -607 2707 2565 852 235 235 25 chr18 13661854 13662326 -73015222 - MLT1G LTR MaLR -8 582 12 248 281 0 0 chr18 13662334 13662391 -73015157 - MIR SINE MIR -106 156 100 256 290 122 0 chr18 13663959 13664066 -73013482 + L2 LINE L2 3150 3269 -3 567 253 30 48 chr18 13665146 13665312 -73012236 + MIR SINE MIR 11 173 -89 1797 182 0 22 chr18 13665732 13666051 -73011497 + AluJo SINE Alu 1 312 0 842 248 69 31 chr18 13666243 13666562 -73010986 - L2 LINE L2 -713 2601 2271 3179 188 40 13 chr18 13667872 13668499 -73009049 - LTR9B LTR ERV1 0 644 1 314 361 23 15 chr18 13668562 13668695 -73008853 + L2 LINE L2 3139 3272 0 685 262 109 16 chr18 13668867 13669100 -73008448 + MLT1H LTR MaLR 1 297 -252 1649 268 154 17 chr18 13669141 13669895 -73007653 - L2 LINE L2 -1788 1526 670 360 187 149 19 chr18 13670210 13670317 -73007231 + L2 LINE L2 3193 3313 0 562 167 174 14 chr18 13670965 13671109 -73006439 - MER20 DNA MER1_type -52 167 1 206 269 67 58 chr18 13671194 13671298 -73006250 + L2 LINE L2 3163 3267 -5 2576 42 3 3 chr18 13671401 13671711 -73005837 + AluY SINE Alu 1 310 -1 271 327 65 48 chr18 13671722 13671890 -73005658 - MIR SINE MIR -40 222 52 2349 103 0 0 chr18 13672398 13672710 -73004838 + AluSx SINE Alu 1 312 0 279 287 147 31 chr18 13672750 13672879 -73004669 - L2 LINE L2 -4 3268 3125 186 278 153 85 chr18 13673020 13673373 -73004175 - L2 LINE L2 -676 2638 2262 2079 135 3 0 chr18 13673966 13674262 -73003286 + AluSx SINE Alu 1 297 -15 246 258 41 52 chr18 13674520 13674617 -73002931 - L2 LINE L2 -1344 1970 1875 228 35 0 0 chr18 13674683 13674712 -73002836 + (T)n Simple_repeat Simple_repeat 1 29 0 453 243 65 0 chr18 13674941 13675048 -73002500 - MER5A DNA MER1_type -74 115 2 231 235 0 0 chr18 13675606 13675657 -73001891 + MER113 DNA MER1_type? 7 57 -464 1737 120 0 8 chr18 13678401 13678667 -72998881 + AluSx SINE Alu 45 308 0 28 0 0 0 chr18 13679321 13679349 -72998199 + AT_rich Low_complexity Low_complexity 1 28 0 357 259 79 60 chr18 13679834 13679973 -72997575 + L1ME LINE L1 5599 5745 -376 2301 95 0 0 chr18 13679973 13680258 -72997290 + AluSx SINE Alu 1 285 -27 357 259 79 60 chr18 13680258 13680334 -72997214 + L1ME LINE L1 5745 5818 -303 2286 151 26 75 chr18 13681349 13681451 -72996097 - Tigger2a DNA MER2_type -2274 434 329 1989 131 0 7 chr18 13681451 13681742 -72995806 - AluJo SINE Alu -12 300 12 2286 151 26 75 chr18 13681742 13682095 -72995453 - Tigger2a DNA MER2_type -2379 329 1 491 240 149 97 chr18 13682690 13683011 -72994537 - MER102b DNA MER1_type -3 338 1 383 52 123 0 chr18 13683292 13683365 -72994183 - L1P LINE L1 -803 5348 5267 6244 72 17 19 chr18 13683365 13684173 -72993375 + L1PA8 LINE L1 5352 6158 -14 23 0 0 0 chr18 13686821 13686844 -72990704 + AT_rich Low_complexity Low_complexity 1 23 0 1593 112 31 5 chr18 13687396 13687619 -72989929 + AluSx SINE Alu 1 229 -83 234 91 0 0 chr18 13687630 13687663 -72989885 + (A)n Simple_repeat Simple_repeat 1 33 0 203 254 70 70 chr18 13687881 13687995 -72989553 + L3 LINE CR1 603 716 -861 1624 201 115 75 chr18 13688686 13689284 -72988264 - MLT1E3 LTR MaLR 0 624 3 197 33 33 0 chr18 13689460 13689490 -72988058 + (TG)n Simple_repeat Simple_repeat 2 32 0 2394 94 0 0 chr18 13689524 13689831 -72987717 + AluSx SINE Alu 1 307 -5 316 204 67 158 chr18 13691039 13691324 -72986224 + L1ME LINE L1 22 280 -5790 281 308 162 11 chr18 13691414 13691599 -72985949 + L1ME LINE L1 237 449 -5621 652 264 95 72 chr18 13691685 13692230 -72985318 + L1ME LINE L1 453 1010 -5073 330 235 12 12 chr18 13692502 13692583 -72984965 + MER5A DNA MER1_type 10 90 -99 877 198 68 0 chr18 13693219 13693411 -72984137 - MER20 DNA MER1_type -7 212 8 390 313 62 17 chr18 13693984 13694163 -72983385 + MIR SINE MIR 76 262 0 32 43 0 0 chr18 13694323 13694369 -72983179 + AT_rich Low_complexity Low_complexity 1 46 0 232 47 23 23 chr18 13695467 13695510 -72982038 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 410 98 0 0 chr18 13695511 13695562 -72981986 - AluJ/FRAM SINE Alu -35 277 227 818 197 0 0 chr18 13695593 13695730 -72981818 - FLAM_C SINE Alu -5 138 2 495 216 112 0 chr18 13699172 13699288 -72978260 - MLT1I LTR MaLR -7 402 274 209 220 40 0 chr18 13699679 13699729 -72977819 - MIR SINE MIR -113 149 98 209 309 159 18 chr18 13700397 13700617 -72976931 + MIR SINE MIR 4 254 -8 267 278 63 24 chr18 13700902 13701028 -72976520 + MIR SINE MIR 105 235 -27 2312 102 0 3 chr18 13701034 13701338 -72976210 + AluSg SINE Alu 1 303 -7 297 328 73 11 chr18 13701413 13701590 -72975958 + L3 LINE CR1 1230 1417 -160 296 324 24 2 chr18 13701563 13701696 -72975852 + MIR SINE MIR 6 141 -67 * 247 291 0 0 chr18 13702157 13702212 -72975336 + MIR SINE MIR 187 241 -21 1730 141 21 14 chr18 13703355 13703646 -72973902 - AluSx SINE Alu -19 293 1 484 250 0 36 chr18 13703660 13703772 -72973776 - FLAM_A SINE Alu -34 108 1 1793 155 7 0 chr18 13704107 13704391 -72973157 + AluSx SINE Alu 12 297 -15 1688 158 28 32 chr18 13704394 13704724 -72972824 + AluSx SINE Alu 1 329 0 1402 158 95 0 chr18 13704728 13704969 -72972579 - AluJb SINE Alu -38 274 11 306 203 0 0 chr18 13705259 13705318 -72972230 - MLT1E1 LTR MaLR 0 654 596 2001 129 7 3 chr18 13705321 13705607 -72971941 + AluSx SINE Alu 1 287 -25 2372 90 0 7 chr18 13705617 13705927 -72971621 + AluY SINE Alu 1 308 -3 870 158 68 0 chr18 13705927 13706073 -72971475 + AluJb SINE Alu 134 289 -23 1973 159 15 80 chr18 13707114 13707504 -72970044 + MLT1A1 LTR MaLR 1 365 0 1074 146 0 36 chr18 13707639 13707851 -72969697 + AluJb SINE Alu 1 275 -37 345 140 0 0 chr18 13707851 13707908 -72969640 + (GA)n Simple_repeat Simple_repeat 1 57 0 381 298 18 9 chr18 13708149 13708263 -72969285 + MIR SINE MIR 148 262 0 829 196 0 0 chr18 13708775 13708908 -72968640 - FLAM_C SINE Alu 0 133 1 2449 89 0 0 chr18 13709241 13709543 -72968005 - AluSx SINE Alu -10 302 1 1298 158 0 32 chr18 13710169 13710390 -72967158 + AluJb SINE Alu 79 292 -20 623 162 110 32 chr18 13710393 13710587 -72966961 + AluJo/FRAM SINE Alu 137 302 0 268 272 33 0 chr18 13710587 13710679 -72966869 + Charlie2 DNA MER1_type 2768 2862 0 1373 97 0 0 chr18 13710926 13711101 -72966447 + AluSg/x SINE Alu 128 302 -8 248 231 15 62 chr18 13711183 13711248 -72966300 - L2 LINE L2 -10 3262 3201 3044 193 38 33 chr18 13711257 13711412 -72966136 + MER82 DNA MER2_type 12 165 -488 2021 105 0 14 chr18 13711412 13711727 -72965821 - AluSx SINE Alu 0 311 1 3044 193 38 33 chr18 13711727 13712209 -72965339 + MER82 DNA MER2_type 165 653 0 1742 196 23 12 chr18 13712261 13712603 -72964945 + Tigger3(Golem) DNA MER2_type 1 346 -2683 24784 62 6 4 chr18 13712605 13713547 -72964001 - Harlequin LTR ERV1 -1770 5126 4188 212 0 36 0 chr18 13713547 13713575 -72963973 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 24784 62 6 4 chr18 13713575 13715699 -72961849 - Harlequin LTR ERV1 -2708 4188 2053 7307 73 73 16 chr18 13715685 13716736 -72960812 - Harlequin LTR ERV1 -5785 1111 1 * 2100 191 82 30 chr18 13716736 13717202 -72960346 - LTR2B LTR ERV1 0 490 1 324 170 19 0 chr18 13717458 13717511 -72960037 - MLT-int LTR MaLR -1234 501 448 239 200 129 0 chr18 13718253 13718323 -72959225 + Charlie5 DNA MER1_type 37 115 -2497 197 280 129 23 chr18 13718450 13718582 -72958966 - L2 LINE L2 -2 3270 3125 235 313 61 0 chr18 13718685 13718832 -72958716 - L1M4 LINE L1 -2440 3706 3551 509 275 127 4 chr18 13718912 13719141 -72958407 - L1ME2 LINE L1 -21 6143 5887 2063 175 82 35 chr18 13719317 13719779 -72957769 + LTR2B LTR ERV1 7 490 0 456 246 116 53 chr18 13719840 13720145 -72957403 - L1ME2 LINE L1 -501 5661 5336 223 174 0 83 chr18 13720534 13720655 -72956893 + (CGGGG)n Simple_repeat Simple_repeat 4 114 0 746 271 153 13 chr18 13721429 13721827 -72955721 + L1MB8 LINE L1 5255 5708 -2100 1250 120 0 42 chr18 13721999 13722191 -72955357 + AluSx SINE Alu 35 218 -94 336 48 0 0 chr18 13722912 13722954 -72954594 + (CA)n Simple_repeat Simple_repeat 2 43 0 27 0 0 0 chr18 13723136 13723163 -72954385 + AT_rich Low_complexity Low_complexity 1 27 0 613 316 71 35 chr18 13723691 13724239 -72953309 + L1MC4a LINE L1 5314 5881 -1927 2323 105 0 3 chr18 13724432 13724737 -72952811 - AluSp SINE Alu -9 304 1 457 172 41 33 chr18 13724949 13725071 -72952477 + L1MB8 LINE L1 6056 6178 0 21 36 0 0 chr18 13725106 13725134 -72952414 + AT_rich Low_complexity Low_complexity 1 28 0 31 44 0 0 chr18 13725973 13726018 -72951530 + AT_rich Low_complexity Low_complexity 1 45 0 251 0 59 0 chr18 13726066 13726100 -72951448 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 810 271 142 12 chr18 13726123 13726525 -72951023 + L1ME3A LINE L1 5255 5708 -2100 1750 141 0 28 chr18 13726697 13726981 -72950567 + AluSx SINE Alu 35 310 -2 332 301 35 27 chr18 13727144 13727400 -72950148 + L1M4 LINE L1 3253 3510 -2636 2480 59 0 10 chr18 13727936 13728242 -72949306 + AluY SINE Alu 1 303 -8 419 288 97 43 chr18 13728732 13729060 -72948488 - L1ME LINE L1 -299 5822 5468 1387 162 8 17 chr18 13729060 13729295 -72948253 - MER46A DNA MER2_type -3 233 1 419 288 97 43 chr18 13729295 13729358 -72948190 - L1ME LINE L1 -653 5468 5410 215 286 0 0 chr18 13729658 13729714 -72947834 + MIR3 SINE MIR 153 208 0 21 0 0 0 chr18 13730247 13730268 -72947280 + AT_rich Low_complexity Low_complexity 1 21 0 361 305 9 9 chr18 13730661 13730766 -72946782 - MIR SINE MIR -152 110 6 430 250 24 49 chr18 13732068 13732232 -72945316 + L1ME3A LINE L1 5996 6155 -15 189 0 0 0 chr18 13732891 13732912 -72944636 + (TC)n Simple_repeat Simple_repeat 2 22 0 225 268 18 0 chr18 13734554 13734610 -72942938 + (TGGA)n Simple_repeat Simple_repeat 4 60 0 253 245 136 65 chr18 13736017 13736172 -72941376 - L1MC/D LINE L1 -2083 5725 5560 1126 145 6 12 chr18 13736407 13736579 -72940969 - AluSx SINE Alu -21 289 119 28 0 0 0 chr18 13736808 13736836 -72940712 + AT_rich Low_complexity Low_complexity 1 28 0 927 161 0 0 chr18 13737287 13737424 -72940124 - AluSx SINE Alu -175 137 1 946 291 144 17 chr18 13737651 13738236 -72939312 + L1ME3A LINE L1 5499 6157 -13 2101 92 10 24 chr18 13738639 13738974 -72938574 + AluSc SINE Alu 1 331 0 196 352 0 45 chr18 13739030 13739118 -72938430 + MIR3 SINE MIR 119 202 -6 2124 111 27 0 chr18 13740861 13741159 -72936389 - AluSx SINE Alu -6 306 1 307 306 64 29 chr18 13745872 13746045 -72931503 + MIR SINE MIR 31 209 -53 247 270 22 11 chr18 13746074 13746163 -72931385 - MIR SINE MIR -150 112 23 2561 254 45 40 chr18 13747255 13748484 -72929064 + L1MB4 LINE L1 4223 5445 -735 2135 117 10 0 chr18 13748484 13748775 -72928773 - AluSg SINE Alu -16 294 1 2406 80 0 10 chr18 13748784 13749085 -72928463 - AluY SINE Alu -13 298 1 2561 254 45 40 chr18 13749085 13749602 -72927946 + L1MB4 LINE L1 5452 5988 -192 590 225 68 36 chr18 13751954 13752176 -72925372 + L1MB4 LINE L1 5952 6180 0 24 32 0 0 chr18 13752936 13752967 -72924581 + AT_rich Low_complexity Low_complexity 1 31 0 1522 256 69 26 chr18 13753082 13753253 -72924295 + L1ME1 LINE L1 5512 5674 -492 5836 187 39 9 chr18 13753253 13754449 -72923099 - Tigger3b DNA MER2_type 0 1231 1 1522 256 69 26 chr18 13754449 13754898 -72922650 + L1ME1 LINE L1 5674 6159 -7 251 244 49 24 chr18 13755028 13755151 -72922397 - L1M4 LINE L1 -2198 3948 3823 2024 29 37 0 chr18 13755377 13755620 -72921928 + L1PA4 LINE L1 5904 6155 0 267 296 74 6 chr18 13756133 13756295 -72921253 - MIR SINE MIR -39 223 51 251 320 27 34 chr18 13758135 13758282 -72919266 + L2 LINE L2 2915 3060 -212 193 275 43 0 chr18 13758471 13758540 -72919008 + L2 LINE L2 3241 3312 -1 2275 115 0 0 chr18 13760014 13760310 -72917238 - AluSx SINE Alu -16 296 1 9272 199 42 13 chr18 13760544 13761221 -72916327 + L1PA13 LINE L1 559 1215 -5582 267 31 0 0 chr18 13761221 13761253 -72916295 + (CTG)n Simple_repeat Simple_repeat 1 32 0 9272 199 42 13 chr18 13761253 13762974 -72914574 + L1PA13 LINE L1 1215 3041 -3756 40712 65 13 5 chr18 13762987 13769102 -72908446 + L1PA5 LINE L1 4 6168 0 1384 132 0 5 chr18 13769111 13769324 -72908224 + L1P4 LINE L1 5391 5602 -566 352 267 19 50 chr18 13769342 13769582 -72907966 - L1MDb LINE L1 -4988 1397 1130 388 261 140 63 chr18 13769790 13770396 -72907152 - L1M4 LINE L1 -1745 4401 3749 2218 112 3 13 chr18 13770409 13770723 -72906825 - AluSx SINE Alu -1 311 1 1242 194 61 67 chr18 13770757 13771108 -72906440 + MLT1A2 LTR MaLR 1 351 -23 2643 167 33 77 chr18 13771108 13771748 -72905800 - LTR9 LTR ERV1 0 612 1 1242 194 61 67 chr18 13771748 13771772 -72905776 + MLT1A2 LTR MaLR 351 374 0 865 298 40 60 chr18 13771945 13772345 -72905203 - MLT1I LTR MaLR -3 406 15 264 276 0 35 chr18 13773459 13773546 -72904002 + CT-rich Low_complexity Low_complexity 4 87 0 227 330 40 0 chr18 13777707 13777807 -72899741 + MIR SINE MIR 111 214 -48 1834 71 0 4 chr18 13780146 13780371 -72897177 + AluY SINE Alu 1 224 -87 1166 72 0 0 chr18 13780371 13780509 -72897039 + AluY SINE Alu 149 286 -25 28 0 0 0 chr18 13780509 13780537 -72897011 + AT_rich Low_complexity Low_complexity 1 28 0 184 239 51 137 chr18 13782435 13782552 -72894996 - MIR SINE MIR -72 136 30 201 316 41 61 chr18 13786418 13786516 -72891032 - L2 LINE L2 -228 3044 2949 1525 134 42 0 chr18 13786778 13786995 -72890553 + MER30 DNA MER1_type 5 230 0 187 224 155 0 chr18 13787543 13787601 -72889947 + L2 LINE L2 3206 3272 0 2775 103 3 19 chr18 13788655 13789025 -72888523 + THE1B LTR MaLR 1 364 0 2101 149 0 0 chr18 13790178 13790487 -72887061 - AluSx SINE Alu -3 309 1 201 39 0 0 chr18 13791245 13791271 -72886277 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2055 124 7 16 chr18 13791898 13792205 -72885343 - AluSx SINE Alu -8 304 1 21 0 0 0 chr18 13792386 13792407 -72885141 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr18 13793824 13793849 -72883699 + AT_rich Low_complexity Low_complexity 1 25 0 214 255 0 0 chr18 13796614 13796665 -72880883 + (CATA)n Simple_repeat Simple_repeat 2 52 0 373 196 10 10 chr18 13797014 13797111 -72880437 + CT-rich Low_complexity Low_complexity 4 100 0 249 240 0 0 chr18 13797112 13797162 -72880386 + T-rich Low_complexity Low_complexity 1 50 0 24 0 0 0 chr18 13797176 13797200 -72880348 + GC_rich Low_complexity Low_complexity 1 24 0 4831 218 80 64 chr18 13797339 13799584 -72877964 - L1M4 LINE L1 -2709 3935 1729 2091 116 44 0 chr18 13799584 13799878 -72877670 - AluSq SINE Alu -6 307 1 4831 218 80 64 chr18 13799878 13799975 -72877573 - L1M4 LINE L1 -4915 1729 1635 7960 87 6 152 chr18 13799975 13801537 -72876011 - SVA Other Other 0 1386 53 4831 218 80 64 chr18 13801537 13803046 -72874502 - L1M4 LINE L1 -5009 1635 5 1542 141 121 20 chr18 13803748 13804103 -72873445 + MSTB1 LTR MaLR 1 432 0 280 367 51 19 chr18 13804288 13804446 -72873102 - L3 LINE CR1 -27 1550 1388 569 157 5 38 chr18 13806920 13807105 -72870443 + (TG)n Simple_repeat Simple_repeat 2 180 0 1953 163 3 6 chr18 13807774 13808255 -72869293 + AluJo SINE Alu 1 480 0 296 313 26 17 chr18 13808407 13808522 -72869026 + L2 LINE L2 3137 3252 -20 22 56 0 0 chr18 13809247 13809283 -72868265 + AT_rich Low_complexity Low_complexity 1 36 0 190 324 28 41 chr18 13810606 13810751 -72866797 - L2 LINE L2 -607 2707 2565 864 233 235 25 chr18 13811497 13811969 -72865579 - MLT1G LTR MaLR -8 582 12 248 281 0 0 chr18 13811977 13812034 -72865514 - MIR SINE MIR -106 156 100 256 290 122 0 chr18 13813602 13813709 -72863839 + L2 LINE L2 3150 3269 -3 567 253 30 48 chr18 13814789 13814955 -72862593 + MIR SINE MIR 11 173 -89 1797 182 0 22 chr18 13815375 13815694 -72861854 + AluJo SINE Alu 1 312 0 842 248 69 31 chr18 13815886 13816205 -72861343 - L2 LINE L2 -713 2601 2271 3111 191 40 13 chr18 13817515 13818142 -72859406 - LTR9B LTR ERV1 0 644 1 314 361 23 15 chr18 13818205 13818338 -72859210 + L2 LINE L2 3139 3272 0 709 259 109 16 chr18 13818510 13818743 -72858805 + MLT1H LTR MaLR 1 297 -252 1649 268 154 17 chr18 13818784 13819538 -72858010 - L2 LINE L2 -1788 1526 670 360 187 149 19 chr18 13819853 13819960 -72857588 + L2 LINE L2 3193 3313 0 560 167 174 14 chr18 13820607 13820751 -72856797 - MER20 DNA MER1_type -52 167 1 206 269 67 58 chr18 13820836 13820940 -72856608 + L2 LINE L2 3163 3267 -5 2620 42 3 0 chr18 13821044 13821354 -72856194 + AluY SINE Alu 1 311 0 271 327 65 48 chr18 13821365 13821533 -72856015 - MIR SINE MIR -40 222 52 2335 106 0 0 chr18 13822041 13822353 -72855195 + AluSx SINE Alu 1 312 0 279 287 147 31 chr18 13822393 13822522 -72855026 - L2 LINE L2 -4 3268 3125 186 278 153 85 chr18 13822663 13823016 -72854532 - L2 LINE L2 -676 2638 2262 2079 135 3 0 chr18 13823609 13823905 -72853643 + AluSx SINE Alu 1 297 -15 257 278 31 41 chr18 13824163 13824260 -72853288 - L2 LINE L2 -1344 1970 1875 243 0 0 0 chr18 13824326 13824353 -72853195 + (T)n Simple_repeat Simple_repeat 1 27 0 453 243 65 0 chr18 13824582 13824689 -72852859 - MER5A DNA MER1_type -74 115 2 231 235 0 0 chr18 13825247 13825298 -72852250 + MER113 DNA MER1_type? 7 57 -464 1737 120 0 8 chr18 13828043 13828309 -72849239 + AluSx SINE Alu 45 308 0 28 0 0 0 chr18 13828963 13828991 -72848557 + AT_rich Low_complexity Low_complexity 1 28 0 357 259 79 60 chr18 13829476 13829615 -72847933 + L1ME LINE L1 5599 5745 -376 2278 98 0 0 chr18 13829615 13829900 -72847648 + AluSx SINE Alu 1 285 -27 357 259 79 60 chr18 13829900 13829976 -72847572 + L1ME LINE L1 5745 5818 -303 2268 153 26 75 chr18 13830991 13831093 -72846455 - Tigger2a DNA MER2_type -2274 434 329 2016 127 0 7 chr18 13831093 13831384 -72846164 - AluJo SINE Alu -12 300 12 2268 153 26 75 chr18 13831384 13831737 -72845811 - Tigger2a DNA MER2_type -2379 329 1 491 240 149 97 chr18 13832333 13832654 -72844894 - MER102b DNA MER1_type -3 338 1 383 52 123 0 chr18 13832935 13833008 -72844540 - L1P LINE L1 -803 5348 5267 5957 72 17 19 chr18 13833008 13833816 -72843732 + L1PA8 LINE L1 5352 6158 -14 23 0 0 0 chr18 13836462 13836485 -72841063 + AT_rich Low_complexity Low_complexity 1 23 0 1606 112 31 5 chr18 13837037 13837260 -72840288 + AluSx SINE Alu 1 229 -83 1449 196 115 75 chr18 13838326 13838924 -72838624 - MLT1E3 LTR MaLR 0 624 3 197 33 33 0 chr18 13839100 13839130 -72838418 + (TG)n Simple_repeat Simple_repeat 2 32 0 2449 91 0 0 chr18 13839164 13839471 -72838077 + AluSx SINE Alu 1 307 -5 315 204 67 158 chr18 13840679 13840964 -72836584 + L1ME LINE L1 22 280 -5790 286 303 162 11 chr18 13841054 13841239 -72836309 + L1ME LINE L1 237 449 -5621 620 264 95 72 chr18 13841325 13841870 -72835678 + L1ME LINE L1 453 1010 -5073 305 235 12 12 chr18 13842142 13842223 -72835325 + MER5A DNA MER1_type 10 90 -99 882 198 68 0 chr18 13842859 13843051 -72834497 - MER20 DNA MER1_type -7 212 8 343 313 62 17 chr18 13843624 13843803 -72833745 + MIR SINE MIR 76 262 0 32 43 0 0 chr18 13843963 13844009 -72833539 + AT_rich Low_complexity Low_complexity 1 46 0 391 98 0 0 chr18 13845107 13845202 -72832346 - AluJ/FRAM SINE Alu 0 321 227 767 197 0 0 chr18 13845233 13845370 -72832178 - FLAM_C SINE Alu -5 138 2 502 216 112 0 chr18 13848812 13848928 -72828620 - MLT1I LTR MaLR -7 402 274 193 220 40 0 chr18 13849319 13849369 -72828179 - MIR SINE MIR -113 149 98 236 278 63 24 chr18 13850542 13850668 -72826880 + MIR SINE MIR 105 235 -27 2154 113 3 3 chr18 13850674 13850967 -72826581 + AluSg SINE Alu 1 293 -17 272 322 132 4 chr18 13850984 13851211 -72826337 + L2 LINE L2 3042 3297 -16 362 191 355 0 chr18 13853104 13853259 -72824289 - MER45C DNA AcHobo -3 950 737 242 245 176 0 chr18 13853257 13853359 -72824189 - MER45C DNA AcHobo -537 416 297 * 534 215 163 0 chr18 13853408 13853543 -72824005 - MER45C DNA AcHobo -788 165 9 323 281 43 37 chr18 13855139 13855303 -72822245 - MER20B DNA MER1_type -616 167 3 859 178 74 40 chr18 13855387 13855589 -72821959 - MER3 DNA MER1_type 0 209 1 2527 69 0 3 chr18 13856062 13856367 -72821181 + AluY SINE Alu 1 304 -7 287 243 112 0 chr18 13856782 13856889 -72820659 - MER103 DNA DNA -19 147 29 511 269 74 14 chr18 13857712 13857928 -72819620 + MIR SINE MIR 2 230 -32 486 307 0 7 chr18 13860516 13860656 -72816892 - MIR SINE MIR -10 252 114 1513 172 28 53 chr18 13861091 13861434 -72816114 - AluJb SINE Alu 0 335 1 2102 112 0 11 chr18 13862009 13862337 -72815211 + AluSx SINE Alu 1 325 0 2012 159 3 0 chr18 13862483 13862779 -72814769 + AluSx SINE Alu 1 297 -15 998 248 85 27 chr18 13863425 13863786 -72813762 - MLT1C LTR MaLR -126 379 1 3112 78 16 2 chr18 13863936 13864360 -72813188 - L1PA13 LINE L1 -8 6155 5726 297 180 0 0 chr18 13864360 13864410 -72813138 + L1PA15-16 LINE L1 2473 2522 -4327 2450 208 75 28 chr18 13864410 13864842 -72812706 + MER69 DNA AcHobo 1839 2249 -277 1750 169 7 16 chr18 13864842 13865149 -72812399 + AluJo SINE Alu 1 304 -8 2450 208 75 28 chr18 13865149 13865283 -72812265 + MER69 DNA AcHobo 2249 2375 -151 2504 79 0 0 chr18 13865283 13865586 -72811962 - AluSc SINE Alu -6 303 1 2450 208 75 28 chr18 13865586 13865673 -72811875 + MER69 DNA AcHobo 2375 2524 -2 43590 32 23 0 chr18 13866803 13872813 -72804735 - L1PA2 LINE L1 0 6155 3 220 355 57 24 chr18 13873800 13873924 -72803624 - L2 LINE L2 -1 3271 3144 1516 146 52 24 chr18 13874191 13874547 -72803001 + LTR19A LTR ERV1 1 485 -1 1000 257 50 19 chr18 13874548 13874965 -72802583 + MLT1F LTR MaLR 17 542 0 2192 110 7 13 chr18 13875537 13875837 -72801711 + AluSq SINE Alu 1 298 -15 2131 120 40 0 chr18 13876068 13876369 -72801179 + AluSq SINE Alu 1 313 0 519 268 191 0 chr18 13877605 13877904 -72799644 - HAL1b LINE L1 -35 1313 958 825 64 0 3 chr18 13878046 13878264 -72799284 + AluY SINE Alu 17 291 -20 314 210 76 25 chr18 13878264 13878383 -72799165 - HAL1b LINE L1 -541 807 683 5255 138 25 5 chr18 13878390 13879284 -72798264 - L1MA4 LINE L1 0 6300 5389 1037 251 41 25 chr18 13879283 13879646 -72797902 - HAL1b LINE L1 -649 699 331 * 273 57 0 0 chr18 13879686 13879721 -72797827 + (TG)n Simple_repeat Simple_repeat 2 36 0 560 274 184 9 chr18 13879830 13880166 -72797382 - HAL1 LINE L1 -2 2505 2111 241 294 71 60 chr18 13880201 13880385 -72797163 + L2 LINE L2 3128 3313 0 1971 256 115 53 chr18 13880396 13881764 -72795784 - HAL1 LINE L1 -406 2101 650 2851 35 0 0 chr18 13882392 13882710 -72794838 - AluYb8 SINE Alu 0 318 1 21 0 0 0 chr18 13882824 13882845 -72794703 + AT_rich Low_complexity Low_complexity 1 21 0 2242 91 10 0 chr18 13883748 13884075 -72793473 - AluY SINE Alu 0 311 1 1985 143 14 3 chr18 13884077 13884371 -72793177 - AluSx SINE Alu -15 297 1 419 278 144 59 chr18 13886138 13886444 -72791104 - L2 LINE L2 -10 3262 2931 1806 77 8 28 chr18 13886721 13886969 -72790579 - L1PA11 LINE L1 0 6174 5932 397 306 49 21 chr18 13886969 13887113 -72790435 + L2 LINE L2 3112 3259 -13 922 245 107 47 chr18 13887120 13887569 -72789979 + MLT1H LTR MaLR 15 490 -59 321 68 0 0 chr18 13887569 13887613 -72789935 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2732 89 0 3 chr18 13887613 13887983 -72789565 - L1PA8 LINE L1 -24 6148 5780 291 209 30 0 chr18 13887983 13888050 -72789498 + MLT1H LTR MaLR 482 550 -5 537 323 36 40 chr18 13888138 13888414 -72789134 - L3 LINE CR1 -170 1407 1133 21 0 0 0 chr18 13891226 13891247 -72786301 + AT_rich Low_complexity Low_complexity 1 21 0 243 155 28 14 chr18 13891329 13891400 -72786148 + (TA)n Simple_repeat Simple_repeat 1 72 0 370 204 19 0 chr18 13892040 13892143 -72785405 + CT-rich Low_complexity Low_complexity 2 106 0 2165 218 49 64 chr18 13892178 13892954 -72784594 - L1M4 LINE L1 -1212 4934 4171 288 0 0 0 chr18 13892956 13892988 -72784560 + (TG)n Simple_repeat Simple_repeat 1 32 0 1738 114 0 39 chr18 13892988 13893243 -72784305 - AluSx SINE Alu -33 279 35 706 279 153 13 chr18 13893415 13893813 -72783735 - L1MC/D LINE L1 -2100 5708 5255 21008 34 0 0 chr18 13894835 13898011 -72779537 + L1PA2 LINE L1 2978 6155 0 455 263 51 57 chr18 13899635 13899810 -72777738 + MIR SINE MIR 56 229 -33 1996 130 14 3 chr18 13900382 13900674 -72776874 + AluSc SINE Alu 1 295 -14 23 33 0 0 chr18 13900674 13900704 -72776844 + AT_rich Low_complexity Low_complexity 1 30 0 184 215 0 38 chr18 13901222 13901301 -72776247 + CT-rich Low_complexity Low_complexity 2 77 0 228 299 78 13 chr18 13902562 13902639 -72774909 + MIR SINE MIR 46 127 -81 2286 84 3 0 chr18 13902680 13902978 -72774570 - AluY SINE Alu -12 299 1 2174 119 0 7 chr18 13903929 13904223 -72773325 - AluSq SINE Alu -21 292 1 3720 175 24 18 chr18 13904235 13904948 -72772600 - L1MB8 LINE L1 -1 6177 5461 2381 67 0 14 chr18 13904948 13905245 -72772303 + AluY SINE Alu 1 293 -18 818 0 21 0 chr18 13907289 13907386 -72770162 + (TTTTA)n Simple_repeat Simple_repeat 4 102 0 2450 60 0 20 chr18 13908057 13908359 -72769189 + AluY SINE Alu 1 296 -15 283 105 99 37 chr18 13908779 13908941 -72768607 + (CATAT)n Simple_repeat Simple_repeat 4 175 0 186 117 104 0 chr18 13908994 13909071 -72768477 + (CATAT)n Simple_repeat Simple_repeat 4 88 0 300 105 128 0 chr18 13909117 13909250 -72768298 + (CATAT)n Simple_repeat Simple_repeat 4 153 0 236 73 91 0 chr18 13909296 13909351 -72768197 + (CATAT)n Simple_repeat Simple_repeat 4 63 0 217 245 0 0 chr18 13909450 13909499 -72768049 + CT-rich Low_complexity Low_complexity 3 51 0 1068 270 138 34 chr18 13909766 13910237 -72767311 + MLT1E LTR MaLR 35 554 -39 500 319 48 10 chr18 13911335 13911542 -72766006 - Charlie8 DNA MER1_type -2201 216 2 2067 120 3 3 chr18 13911665 13911965 -72765583 + AluSx SINE Alu 1 300 -12 279 320 110 36 chr18 13912619 13912838 -72764710 + L2 LINE L2 2657 2891 -423 2561 68 0 0 chr18 13913779 13914090 -72763458 + AluY SINE Alu 1 311 0 3136 206 48 43 chr18 13914244 13914663 -72762885 - Charlie1 DNA MER1_type -1 2760 2345 2088 130 0 7 chr18 13914663 13914963 -72762585 + AluSx SINE Alu 2 299 -13 3136 206 48 43 chr18 13914963 13915376 -72762172 - Charlie1 DNA MER1_type -416 2345 1924 821 119 0 0 chr18 13915476 13915594 -72761954 + AluSg/x SINE Alu 178 295 -17 1688 164 28 7 chr18 13916832 13917119 -72760429 + MER7A DNA MER2_type 56 346 0 10811 188 39 12 chr18 13917119 13918076 -72759472 - L1 LINE L1 -1645 5920 4990 186 43 0 0 chr18 13918076 13918099 -72759449 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 10811 188 39 12 chr18 13918099 13918925 -72758623 - L1 LINE L1 -2575 4990 4059 2322 98 3 0 chr18 13918925 13919231 -72758317 + AluY SINE Alu 2 308 -3 10811 188 39 12 chr18 13919231 13919750 -72757798 - L1 LINE L1 -3506 4059 3555 848 97 32 0 chr18 13919840 13919964 -72757584 - L1PB4 LINE L1 -1 6155 6028 1086 208 52 52 chr18 13919964 13920248 -72757300 - L1 LINE L1 -4005 3560 3272 2267 111 0 0 chr18 13920248 13920545 -72757003 + AluSx SINE Alu 3 299 -13 1086 208 52 52 chr18 13920545 13920671 -72756877 - L1 LINE L1 -4292 3273 3148 1252 107 127 15 chr18 13923005 13923210 -72754338 - MER30 DNA MER1_type 0 230 3 37513 39 9 4 chr18 13923702 13929024 -72748524 - L1PA4 LINE L1 -1 6154 806 510 373 79 0 chr18 13929378 13929619 -72747929 - L3 LINE CR1 -1 1576 1317 308 259 154 19 chr18 13929796 13929958 -72747590 - LTR33A LTR ERVL -10 513 330 292 254 142 0 chr18 13930498 13930632 -72746916 + LTR33A LTR ERVL 364 516 -7 376 293 105 41 chr18 13930818 13931180 -72746368 + LTR16A LTR ERVL 60 444 -6 307 292 87 26 chr18 13931576 13931771 -72745777 + L2 LINE L2 2934 3140 -173 2648 52 0 0 chr18 13931910 13932218 -72745330 - AluY SINE Alu -3 308 1 270 91 0 109 chr18 13932627 13932682 -72744866 + L2 LINE L2 3224 3272 0 1950 114 44 27 chr18 13933102 13933399 -72744149 - AluSg SINE Alu -8 302 1 615 209 55 0 chr18 13933573 13933683 -72743865 + FLAM_A SINE Alu 7 122 -20 233 215 21 75 chr18 13933978 13934071 -72743477 - MIR SINE MIR -56 206 119 221 260 0 0 chr18 13934948 13934998 -72742550 - MIR SINE MIR -26 236 187 447 35 0 0 chr18 13935755 13935812 -72741736 + (CA)n Simple_repeat Simple_repeat 2 58 0 31 26 0 0 chr18 13936335 13936373 -72741175 + AT_rich Low_complexity Low_complexity 1 38 0 234 0 0 0 chr18 13936599 13936625 -72740923 + (TG)n Simple_repeat Simple_repeat 2 27 0 2106 126 50 34 chr18 13937251 13937609 -72739939 - THE1B LTR MaLR 0 364 1 353 233 33 11 chr18 13937704 13937794 -72739754 - L2 LINE L2 0 3272 3181 219 308 84 9 chr18 13937776 13937883 -72739665 + MIR SINE MIR 16 130 -132 * 454 206 48 24 chr18 13938331 13938457 -72739091 - MIR SINE MIR -29 233 105 2832 211 30 62 chr18 13941371 13941828 -72735720 - MER82 DNA MER2_type -1 652 182 2399 70 16 19 chr18 13941828 13942140 -72735408 - AluY SINE Alu 0 311 1 2832 211 30 62 chr18 13942140 13942165 -72735383 - MER82 DNA MER2_type -471 182 158 800 172 0 0 chr18 13942165 13942287 -72735261 - FLAM_C SINE Alu -11 122 1 2832 211 30 62 chr18 13942287 13942477 -72735071 - MER82 DNA MER2_type -495 158 1 236 213 38 12 chr18 13942929 13943009 -72734539 + (TA)n Simple_repeat Simple_repeat 1 82 0 1715 120 95 15 chr18 13943179 13943453 -72734095 + AluSx SINE Alu 1 296 -16 459 144 124 59 chr18 13943699 13943852 -72733696 - MER53 DNA DNA -26 163 1 258 81 0 0 chr18 13943874 13943911 -72733637 + (TG)n Simple_repeat Simple_repeat 2 38 0 234 0 0 0 chr18 13947374 13947400 -72730148 + (TG)n Simple_repeat Simple_repeat 1 26 0 206 224 0 20 chr18 13947967 13948016 -72729532 + CT-rich Low_complexity Low_complexity 1 48 0 203 419 0 0 chr18 13948346 13948470 -72729078 - MIR SINE MIR -65 143 20 1349 94 6 11 chr18 13949914 13950094 -72727454 + AluSg/x SINE Alu 90 268 -44 49 52 0 0 chr18 13950464 13950541 -72727007 + AT_rich Low_complexity Low_complexity 1 77 0 223 315 161 0 chr18 13950971 13951120 -72726428 + MER5B DNA MER1_type 2 174 -4 1605 164 129 70 chr18 13951545 13951947 -72725601 - MSTB LTR MaLR 0 426 1 1146 108 42 0 chr18 13952216 13952382 -72725166 - AluSg/x SINE Alu -3 307 135 2432 52 20 3 chr18 13952496 13952802 -72724746 + AluY SINE Alu 1 311 0 342 326 141 5 chr18 13953806 13953990 -72723558 + MIR SINE MIR 54 262 0 201 132 0 0 chr18 13955105 13955143 -72722405 + (GA)n Simple_repeat Simple_repeat 1 38 0 2229 73 0 31 chr18 13955789 13956099 -72721449 + AluY SINE Alu 1 301 0 339 221 63 0 chr18 13956587 13956682 -72720866 + MIR3 SINE MIR 81 181 -27 277 340 184 35 chr18 13957341 13957938 -72719610 - L2 LINE L2 -337 2977 2292 2221 126 7 0 chr18 13958529 13958839 -72718709 + AluSx SINE Alu 1 312 0 194 0 0 37 chr18 13958843 13958870 -72718678 + (GAAAA)n Simple_repeat Simple_repeat 4 29 0 209 301 14 14 chr18 13961628 13961701 -72715847 + MIR SINE MIR 32 104 -104 347 297 140 22 chr18 13961782 13962004 -72715544 - MIR SINE MIR 0 262 15 29 0 0 0 chr18 13962118 13962147 -72715401 + AT_rich Low_complexity Low_complexity 1 29 0 2183 129 7 0 chr18 13962152 13962454 -72715094 + AluSq SINE Alu 2 305 -8 2588 58 0 3 chr18 13962515 13962825 -72714723 - AluY SINE Alu -2 309 1 5480 112 269 77 chr18 13962892 13964314 -72713234 + pTR5 LTR ERV1 743 2438 0 1334 204 125 3 chr18 13964365 13964709 -72712839 + MLT1B LTR MaLR 3 388 -2 232 246 51 34 chr18 13965245 13965363 -72712185 + L2 LINE L2 3193 3312 -1 263 293 138 11 chr18 13967100 13967274 -72710274 - L2 LINE L2 0 3313 3118 643 305 76 68 chr18 13967525 13968245 -72709303 - L2 LINE L2 -263 3050 2321 486 0 0 0 chr18 13968654 13968708 -72708840 + (CA)n Simple_repeat Simple_repeat 2 55 0 1299 221 96 11 chr18 13968709 13968865 -72708683 + MLT1C LTR MaLR 34 175 -292 288 0 0 0 chr18 13968865 13968897 -72708651 + (CCA)n Simple_repeat Simple_repeat 1 32 0 1299 221 96 11 chr18 13968897 13969093 -72708455 + MLT1C LTR MaLR 175 416 -51 595 172 0 0 chr18 13969125 13969218 -72708330 - FLAM_C SINE Alu -25 118 26 433 121 0 15 chr18 13969224 13969290 -72708258 + MLT1C LTR MaLR 403 467 0 192 222 0 0 chr18 13969369 13969414 -72708134 - L2 LINE L2 -325 2988 2944 633 329 91 23 chr18 13969720 13970161 -72707387 - L3 LINE CR1 -8 1569 1099 401 188 0 0 chr18 13971557 13971626 -72705922 + MLT1D LTR MaLR 43 111 -394 1575 179 181 15 chr18 13973752 13974149 -72703399 - MLT1D LTR MaLR 0 505 43 1733 182 3 3 chr18 13974199 13974490 -72703058 - AluJb SINE Alu -21 291 1 783 239 0 0 chr18 13975262 13975417 -72702131 - FRAM SINE Alu -11 155 1 204 378 27 0 chr18 13976374 13976485 -72701063 - L2 LINE L2 -2 3311 3198 227 31 31 0 chr18 13976616 13976648 -72700900 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 252 283 17 0 chr18 13977036 13977096 -72700452 + L2 LINE L2 3203 3263 -9 2119 182 2 18 chr18 13977215 13977610 -72699938 - MLT1B LTR MaLR -1 389 1 492 280 11 29 chr18 13977811 13977986 -72699562 + MER5B DNA MER1_type 1 172 -6 346 267 76 15 chr18 13978435 13978566 -72698982 + L2 LINE L2 3132 3270 -2 905 281 60 39 chr18 13979291 13979758 -72697790 - L1MEc LINE L1 -4578 1818 1342 614 222 44 39 chr18 13979751 13979931 -72697617 + L1ME2 LINE L1 5984 6164 0 * 1443 142 11 11 chr18 13980101 13980368 -72697180 + L1MA4 LINE L1 6033 6299 -1 269 200 31 15 chr18 13980512 13980577 -72696971 + GA-rich Low_complexity Low_complexity 3 68 0 530 314 101 16 chr18 13980900 13981206 -72696342 - L2 LINE L2 -1 3312 2981 235 313 45 27 chr18 13982273 13982385 -72695163 - L2 LINE L2 -10 3262 3149 3048 168 34 22 chr18 13983351 13983948 -72693600 + MER6A DNA MER2_type 2 605 0 241 23 23 47 chr18 13983968 13984011 -72693537 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 1247 199 85 36 chr18 13984935 13985241 -72692307 + MER58B DNA MER1_type 1 321 -20 365 58 19 0 chr18 13985293 13985345 -72692203 + (TTCC)n Simple_repeat Simple_repeat 1 53 0 1983 145 20 0 chr18 13985346 13985643 -72691905 - AluSx SINE Alu -9 303 1 742 299 58 44 chr18 13986118 13986530 -72691018 + LTR16A LTR ERVL 33 450 0 310 182 39 13 chr18 13987228 13987305 -72690243 - MER116 DNA Mariner 0 80 2 1490 214 23 26 chr18 13987546 13987891 -72689657 + MER2 DNA MER2_type 1 344 0 300 53 0 0 chr18 13988858 13988896 -72688652 + (TG)n Simple_repeat Simple_repeat 2 39 0 2037 262 71 33 chr18 13988910 13990144 -72687404 - L1ME LINE L1 -4477 1603 391 2124 186 109 6 chr18 13990409 13990888 -72686660 + L1MB5 LINE L1 5640 6167 -7 5177 118 28 31 chr18 13991761 13992141 -72685407 + L1PB1 LINE L1 5152 5532 -619 2231 85 33 19 chr18 13992141 13992448 -72685100 - AluSx SINE Alu 0 312 2 5177 118 28 31 chr18 13992448 13992541 -72685007 + L1PB1 LINE L1 5532 5624 -527 2161 113 0 31 chr18 13992541 13992860 -72684688 + AluSg SINE Alu 1 309 -1 5177 118 28 31 chr18 13992860 13993386 -72684162 + L1PB1 LINE L1 5624 6150 -1 25 0 0 0 chr18 13993386 13993411 -72684137 + AT_rich Low_complexity Low_complexity 1 25 0 2232 78 0 3 chr18 13993421 13993738 -72683810 + AluY SINE Alu 1 316 0 10832 83 1 0 chr18 13993738 13996013 -72681535 + L1PA7 LINE L1 3853 6150 -4 483 130 0 0 chr18 13996013 13996090 -72681458 + (TG)n Simple_repeat Simple_repeat 2 78 0 937 263 48 38 chr18 13996090 13996485 -72681063 + L1 LINE L1 3493 3891 -2255 248 286 32 13 chr18 13996512 13996666 -72680882 + (TA)n Simple_repeat Simple_repeat 1 157 0 225 349 106 10 chr18 13997197 13997395 -72680153 - L1MC/D LINE L1 -2059 5749 5533 356 332 64 38 chr18 13997710 13997945 -72679603 - L1MC/D LINE L1 -982 5164 4924 8731 190 31 15 chr18 13997971 13998858 -72678690 - L1MA10 LINE L1 -1 6397 5526 1260 200 28 97 chr18 13998858 13999248 -72678300 - MLT1A1 LTR MaLR -2 363 1 8731 190 31 15 chr18 13999248 14001154 -72676394 - L1MA10 LINE L1 -872 5526 3561 964 208 64 21 chr18 14001134 14001554 -72675994 - L1MA10 LINE L1 -3762 2448 2006 * 1481 184 17 11 chr18 14001564 14001904 -72675644 + L1 LINE L1 4657 4990 -1156 4739 254 69 35 chr18 14001918 14004069 -72673479 - L1MA10 LINE L1 -4171 2040 2 2106 140 0 0 chr18 14004227 14004527 -72673021 + AluSx SINE Alu 1 300 -12 334 311 12 12 chr18 14004683 14004847 -72672701 - L1M4 LINE L1 -1487 4659 4496 686 78 0 0 chr18 14004938 14005028 -72672520 + MLT2A2 LTR ERVL 353 442 -11 534 182 0 20 chr18 14005146 14005245 -72672303 + MSTB LTR MaLR 1 97 -329 2120 142 18 26 chr18 14005258 14005665 -72671883 - MLT2A2 LTR ERVL -145 308 1 778 270 19 8 chr18 14005670 14005929 -72671619 - L1M4 LINE L1 -2154 3992 3731 339 167 28 14 chr18 14005949 14006021 -72671527 - HsTC2 DNA Tc2 -34 1864 1792 22 0 0 0 chr18 14006071 14006093 -72671455 + AT_rich Low_complexity Low_complexity 1 22 0 757 231 56 92 chr18 14006125 14006463 -72671085 - MLT2C1 LTR ERVL -55 342 17 342 238 105 23 chr18 14006485 14006657 -72670891 - L1 LINE L1 -1756 4390 4205 367 322 99 29 chr18 14006711 14007236 -72670312 - L1 LINE L1 -1990 4156 3595 1703 190 8 44 chr18 14008821 14008882 -72668666 - L1MB7 LINE L1 -19 6165 6103 2315 80 0 43 chr18 14008882 14009207 -72668341 - AluY SINE Alu 0 311 1 1703 190 8 44 chr18 14009207 14009534 -72668014 - L1MB7 LINE L1 -81 6103 5791 271 363 44 0 chr18 14009796 14009909 -72667639 + L3 LINE CR1 1368 1485 -92 23 54 0 0 chr18 14009909 14009946 -72667602 + AT_rich Low_complexity Low_complexity 1 37 0 438 20 0 0 chr18 14010207 14010258 -72667290 + (CA)n Simple_repeat Simple_repeat 2 52 0 463 219 65 0 chr18 14014282 14014405 -72663143 + MIR SINE MIR 114 244 -18 201 258 67 45 chr18 14014441 14014530 -72663018 - MIR SINE MIR -148 114 24 368 40 0 0 chr18 14015068 14015118 -72662430 - AluY SINE Alu -2 300 251 1043 101 0 0 chr18 14015119 14015248 -72662300 - AluSq/x SINE Alu -184 129 1 427 295 43 21 chr18 14015255 14015438 -72662110 - MIR3 SINE MIR -64 144 4 303 318 132 11 chr18 14015925 14016114 -72661434 - L3 LINE CR1 -175 1402 1191 396 0 0 0 chr18 14016554 14016598 -72660950 + (TG)n Simple_repeat Simple_repeat 1 44 0 338 343 86 73 chr18 14016945 14017327 -72660221 + L2 LINE L2 2886 3272 0 6075 138 18 19 chr18 14018745 14019329 -72658219 + L1PB1 LINE L1 4588 5172 -979 198 0 0 0 chr18 14019329 14019351 -72658197 + (TAA)n Simple_repeat Simple_repeat 1 22 0 6075 138 18 19 chr18 14019351 14019942 -72657606 + L1PB1 LINE L1 5172 5763 -388 2229 118 0 0 chr18 14019942 14020246 -72657302 + AluY SINE Alu 1 304 -7 6075 138 18 19 chr18 14020246 14020634 -72656914 + L1PB1 LINE L1 5763 6150 -1 26 0 0 0 chr18 14020634 14020660 -72656888 + AT_rich Low_complexity Low_complexity 1 26 0 429 292 45 49 chr18 14020772 14021080 -72656468 - L2 LINE L2 -583 2731 2425 191 318 100 27 chr18 14021252 14021362 -72656186 - L2 LINE L2 -1 3312 3195 238 261 185 8 chr18 14021527 14021646 -72655902 - L1ME LINE L1 -378 5743 5604 3162 179 27 90 chr18 14021820 14022677 -72654871 + L1MB5 LINE L1 5363 6165 -9 1991 154 3 0 chr18 14023955 14024254 -72653294 - AluSg SINE Alu -10 300 1 23 54 0 0 chr18 14025653 14025690 -72651858 + AT_rich Low_complexity Low_complexity 1 37 0 2224 129 13 16 chr18 14025690 14026063 -72651485 - L1PB1 LINE L1 -3 6148 5777 2379 80 0 10 chr18 14026064 14026365 -72651183 - AluY SINE Alu -13 298 1 256 324 28 9 chr18 14026400 14026508 -72651040 - MIR3 SINE MIR -33 175 66 23 54 0 0 chr18 14027854 14027891 -72649657 + AT_rich Low_complexity Low_complexity 1 37 0 5205 164 31 42 chr18 14028577 14029840 -72647708 - L1MA7 LINE L1 -1 6290 5014 2124 120 13 10 chr18 14029840 14030148 -72647400 - AluSg SINE Alu -1 309 1 5205 164 31 42 chr18 14030148 14030274 -72647274 - L1MA7 LINE L1 -1277 5014 4888 2255 98 10 3 chr18 14030274 14030579 -72646969 - AluSq SINE Alu -6 307 1 5205 164 31 42 chr18 14030579 14031075 -72646473 - L1MA7 LINE L1 -1403 4888 4290 454 206 70 85 chr18 14031307 14031506 -72646042 - L2 LINE L2 0 3313 3118 286 282 27 18 chr18 14032182 14032292 -72645256 + CT-rich Low_complexity Low_complexity 3 113 0 208 158 0 26 chr18 14032632 14032670 -72644878 + CT-rich Low_complexity Low_complexity 2 38 0 1527 216 81 5 chr18 14032752 14033174 -72644374 + L1ME1 LINE L1 4287 4740 -1406 1101 211 46 20 chr18 14033328 14033632 -72643916 + LTR53 LTR ERVL 197 508 -11 2278 231 73 50 chr18 14033642 14035038 -72642510 + L1ME1 LINE L1 4742 6166 0 249 331 47 61 chr18 14035366 14035514 -72642034 - L2 LINE L2 0 3272 3127 223 297 117 90 chr18 14035631 14035858 -72641690 - L2 LINE L2 -499 2815 2596 2582 173 26 15 chr18 14035858 14036314 -72641234 - MER65C LTR ERV1 0 461 1 223 297 117 90 chr18 14036314 14036685 -72640863 - L2 LINE L2 -718 2596 2201 261 345 124 9 chr18 14036861 14036974 -72640574 + L2 LINE L2 3122 3247 -25 32 26 0 0 chr18 14039048 14039087 -72638461 + AT_rich Low_complexity Low_complexity 1 39 0 1204 240 120 14 chr18 14039158 14039666 -72637882 - L1MEc LINE L1 -4122 2599 2038 834 220 18 28 chr18 14039813 14040031 -72637517 - L1MEc LINE L1 -4604 1936 1721 1392 220 42 50 chr18 14040056 14040561 -72636987 - L1MEc LINE L1 -5061 1482 982 334 299 155 60 chr18 14040578 14040862 -72636686 - L1MEc LINE L1 -5845 695 385 3935 246 93 42 chr18 14040866 14041922 -72635626 - L1MEc LINE L1 -4759 1637 479 1006 183 0 0 chr18 14041922 14042075 -72635473 + FRAM SINE Alu 1 153 -13 3935 246 93 42 chr18 14042075 14042539 -72635009 - L1MEc LINE L1 -5917 479 40 245 118 20 0 chr18 14042693 14042744 -72634804 + (TA)n Simple_repeat Simple_repeat 2 53 0 359 299 78 18 chr18 14042953 14043120 -72634428 - L1MEd LINE L1 -5062 1057 881 1874 159 38 23 chr18 14043126 14043472 -72634076 - THE1B LTR MaLR 0 364 1 12554 92 5 4 chr18 14043472 14045051 -72632497 - THE1B-int LTR MaLR 0 1580 1 2334 131 19 25 chr18 14045051 14045417 -72632131 - THE1B LTR MaLR 0 364 1 251 349 123 9 chr18 14045455 14045773 -72631775 - L1MEd LINE L1 -5257 862 509 285 237 41 107 chr18 14045972 14046141 -72631407 - L1MEd LINE L1 -5960 159 2 2184 112 0 0 chr18 14046357 14046651 -72630897 - AluSc SINE Alu -15 294 1 5257 57 0 3 chr18 14047283 14047903 -72629645 - L1PA8 LINE L1 0 6172 5555 1888 115 91 7 chr18 14048143 14048429 -72629119 - AluY SINE Alu -1 310 1 191 246 198 40 chr18 14048962 14049088 -72628460 - MIR3 SINE MIR -31 177 32 305 278 11 11 chr18 14051763 14051853 -72625695 - L3 LINE CR1 -179 1398 1309 951 249 8 25 chr18 14052178 14052415 -72625133 + MIR SINE MIR 5 237 -25 471 35 0 0 chr18 14052551 14052608 -72624940 + (CA)n Simple_repeat Simple_repeat 2 58 0 2352 138 28 6 chr18 14053180 14053536 -72624012 - THE1B LTR MaLR 0 364 1 1952 141 3 7 chr18 14054290 14054595 -72622953 - AluJo SINE Alu -8 304 1 216 364 17 8 chr18 14054661 14054779 -72622769 + L2 LINE L2 3180 3298 -15 1397 147 9 0 chr18 14054820 14055038 -72622510 - AluJb SINE Alu -8 304 85 281 246 72 69 chr18 14055239 14055427 -72622121 + L1ME4a LINE L1 5648 5838 -283 210 71 0 0 chr18 14055487 14055515 -72622033 + (TC)n Simple_repeat Simple_repeat 2 29 0 203 0 37 0 chr18 14055515 14055542 -72622006 + (CA)n Simple_repeat Simple_repeat 1 28 0 300 234 0 13 chr18 14055574 14055651 -72621897 + L1ME4a LINE L1 5962 6037 -84 2327 63 0 14 chr18 14055735 14056049 -72621499 + AluY SINE Alu 1 310 0 6031 100 38 8 chr18 14056572 14057419 -72620129 - MER4D LTR ERV1 0 872 1 23 0 0 0 chr18 14058670 14058693 -72618855 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr18 14059978 14060008 -72617540 + AT_rich Low_complexity Low_complexity 1 30 0 552 239 120 0 chr18 14060868 14061010 -72616538 + MER63A DNA MER1_type 48 206 -4 2087 89 39 0 chr18 14061367 14061648 -72615900 + AluY SINE Alu 1 292 -19 204 296 157 0 chr18 14063219 14063327 -72614221 - MIR SINE MIR -8 254 130 8759 83 8 0 chr18 14064884 14065947 -72611601 - MER11C LTR ERVK 0 1071 1 2121 128 3 0 chr18 14066158 14066464 -72611084 - AluSq SINE Alu -6 307 1 31 88 0 0 chr18 14068085 14068165 -72609383 + AT_rich Low_complexity Low_complexity 1 80 0 323 250 88 53 chr18 14068217 14068428 -72609120 + L1ME LINE L1 5568 5794 -327 215 247 42 114 chr18 14069877 14070023 -72607525 - MIR SINE MIR -57 151 11 3699 164 128 66 chr18 14070391 14071410 -72606138 + pTR5 LTR ERV1 5 2438 0 395 250 128 14 chr18 14071460 14071608 -72605940 + MIR SINE MIR 86 250 -12 1294 209 89 34 chr18 14072521 14072847 -72604701 - MER2 DNA MER2_type 0 344 1 571 75 12 0 chr18 14073990 14074070 -72603478 + L1MA5 LINE L1 6218 6298 -2 217 0 61 0 chr18 14075396 14075429 -72602119 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2178 111 3 0 chr18 14075431 14075720 -72601828 - AluSq SINE Alu -23 290 1 2920 3 0 0 chr18 14076065 14076375 -72601173 - AluY SINE Alu 0 311 2 255 267 59 74 chr18 14076436 14076571 -72600977 + MIR SINE MIR 78 210 -52 195 42 0 0 chr18 14076874 14076898 -72600650 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2097 122 0 13 chr18 14076900 14077211 -72600337 - AluSx SINE Alu -2 310 4 423 298 126 52 chr18 14077780 14078314 -72599234 - L1MC4 LINE L1 -9 8033 7347 330 322 34 7 chr18 14078313 14078459 -72599089 - L1MC4 LINE L1 -1049 6993 6844 * 411 227 175 0 chr18 14078466 14078563 -72598985 - MER58A DNA MER1_type 0 116 3 309 276 9 38 chr18 14079889 14079994 -72597554 - MLT1J2 LTR MaLR -41 409 308 2259 115 0 0 chr18 14080059 14080354 -72597194 - AluSq SINE Alu -16 297 3 2173 98 3 3 chr18 14080656 14080951 -72596597 + AluSx SINE Alu 1 295 -17 2365 77 10 3 chr18 14081917 14082215 -72595333 - AluSp SINE Alu -13 300 1 723 294 32 39 chr18 14082675 14082985 -72594563 - MLT1I LTR MaLR -6 403 96 323 287 42 42 chr18 14083107 14083250 -72594298 - MIR SINE MIR -116 146 4 430 319 84 52 chr18 14083753 14083832 -72593716 - L2 LINE L2 -463 2851 2776 2296 77 0 20 chr18 14083832 14084130 -72593418 - AluY SINE Alu -19 292 1 430 319 84 52 chr18 14084130 14084432 -72593116 - L2 LINE L2 -538 2776 2458 443 300 155 23 chr18 14084475 14084778 -72592770 + LTR16C LTR ERVL 147 489 -2 2006 133 68 31 chr18 14085243 14085567 -72591981 - MER1B DNA MER1_type 0 337 2 192 225 0 0 chr18 14085601 14085641 -72591907 - MIR SINE MIR -122 140 101 348 24 0 0 chr18 14086056 14086097 -72591451 + (TG)n Simple_repeat Simple_repeat 1 41 0 300 127 0 0 chr18 14087278 14087333 -72590215 + (TG)n Simple_repeat Simple_repeat 2 56 0 1877 80 0 0 chr18 14089062 14089300 -72588248 - AluY SINE Alu -1 310 73 182 271 0 86 chr18 14089396 14089466 -72588082 + L2 LINE L2 3239 3302 -11 1607 136 42 68 chr18 14089812 14090023 -72587525 - THE1B LTR MaLR 0 364 162 2220 110 0 7 chr18 14090023 14090322 -72587226 + AluSx SINE Alu 1 297 -15 1607 136 42 68 chr18 14090322 14090418 -72587130 - THE1B LTR MaLR -202 162 65 2357 98 0 9 chr18 14091422 14091738 -72585810 - AluSq SINE Alu 0 313 1 2239 97 0 3 chr18 14092062 14092350 -72585198 - AluSx SINE Alu -25 287 1 4207 176 14 18 chr18 14092571 14093043 -72584505 - MER50 LTR ERV1 0 734 265 2093 113 3 7 chr18 14093043 14093343 -72584205 - AluSq SINE Alu -14 299 1 4207 176 14 18 chr18 14093343 14093607 -72583941 - MER50 LTR ERV1 -469 265 1 213 211 0 0 chr18 14093645 14093683 -72583865 + L2 LINE L2 3261 3298 -15 34 0 0 0 chr18 14094272 14094306 -72583242 + AT_rich Low_complexity Low_complexity 1 34 0 207 200 0 22 chr18 14094821 14094866 -72582682 + CT-rich Low_complexity Low_complexity 3 46 0 1918 232 15 40 chr18 14094869 14095227 -72582321 - L1ME1 LINE L1 -5 6161 5819 364 100 0 0 chr18 14095227 14095287 -72582261 - L1MA5 LINE L1 0 6300 6241 1918 232 15 40 chr18 14095287 14095453 -72582095 - L1ME1 LINE L1 -347 5819 5650 227 238 238 0 chr18 14095816 14095896 -72581652 + MER46C DNA MER2_type 11 109 -229 269 279 0 0 chr18 14096016 14096084 -72581464 + MER46C DNA MER2_type 262 329 -9 2053 115 42 0 chr18 14096175 14096463 -72581085 - AluSx SINE Alu -12 300 1 269 264 26 77 chr18 14096520 14096675 -72580873 + MER112 DNA MER1_type 106 252 -8 2881 94 11 5 chr18 14096741 14097114 -72580434 + THE1C LTR MaLR 1 375 0 927 273 110 21 chr18 14097436 14097957 -72579591 - MLT2E LTR ERVL -4 624 2 2561 275 125 35 chr18 14098759 14099969 -72577579 + L1MC4 LINE L1 6471 7797 -245 2463 135 49 51 chr18 14099969 14100145 -72577403 + MSTA LTR MaLR 1 176 -252 2251 105 0 7 chr18 14100145 14100450 -72577098 + AluSc SINE Alu 1 303 -6 2463 135 49 51 chr18 14100450 14100702 -72576846 + MSTA LTR MaLR 176 428 0 2561 275 125 35 chr18 14100702 14100730 -72576818 + L1MC4 LINE L1 7797 7821 -221 1534 137 12 24 chr18 14100740 14100989 -72576559 + MER44D DNA MER2_type 1 516 -93 317 82 20 0 chr18 14100993 14101042 -72576506 + (TA)n Simple_repeat Simple_repeat 2 51 0 502 113 0 0 chr18 14101042 14101103 -72576445 + MSTA LTR MaLR 7 70 -358 414 100 0 0 chr18 14101103 14101163 -72576385 + (TA)n Simple_repeat Simple_repeat 1 60 0 419 192 13 0 chr18 14101163 14101241 -72576307 + MER44D DNA MER2_type 527 605 0 188 311 107 10 chr18 14101676 14101779 -72575769 - MIR SINE MIR -81 181 69 2486 72 0 0 chr18 14102031 14102335 -72575213 - AluY SINE Alu -7 304 1 254 314 12 12 chr18 14102455 14102541 -72575007 + L2 LINE L2 3185 3270 -2 2569 152 47 43 chr18 14103125 14103367 -72574181 + L1MA8 LINE L1 5700 5939 -373 2471 81 0 3 chr18 14103367 14103674 -72573874 + AluY SINE Alu 1 306 -5 2569 152 47 43 chr18 14103674 14104031 -72573517 + L1MA8 LINE L1 5939 6289 -23 3023 138 38 28 chr18 14104053 14104351 -72573197 + L1MA4 LINE L1 5488 5795 -505 2313 113 0 0 chr18 14104351 14104660 -72572888 + AluSc SINE Alu 1 309 0 3023 138 38 28 chr18 14104660 14104889 -72572659 + L1MA4 LINE L1 5795 6020 -280 683 230 40 13 chr18 14105790 14105942 -72571606 + MER63 DNA MER1_type 1 782 -280 230 0 33 0 chr18 14106234 14106264 -72571284 + (CATA)n Simple_repeat Simple_repeat 2 32 0 477 0 0 0 chr18 14106588 14106641 -72570907 + (TA)n Simple_repeat Simple_repeat 2 54 0 311 289 10 0 chr18 14107616 14107720 -72569828 - L1ME LINE L1 -337 5825 5721 2586 62 0 0 chr18 14107793 14108097 -72569451 + AluY SINE Alu 1 304 -7 182 304 0 88 chr18 14108386 14108511 -72569037 + L2 LINE L2 2162 2275 -1039 306 218 39 13 chr18 14108775 14108853 -72568695 + L2 LINE L2 3234 3313 0 187 282 51 39 chr18 14110021 14110099 -72567449 - L2 LINE L2 -988 2326 2248 306 270 108 27 chr18 14110716 14110864 -72566684 + MIR3 SINE MIR 25 184 -24 280 267 56 44 chr18 14111143 14111233 -72566315 + MER103 DNA DNA 22 112 -54 195 42 0 0 chr18 14111270 14111294 -72566254 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 6316 138 22 11 chr18 14112378 14113639 -72563909 - L1MA4 LINE L1 -5 6295 5023 272 288 106 0 chr18 14113905 14114037 -72563511 + L1ME4a LINE L1 5839 5984 -137 395 270 123 6 chr18 14114116 14114279 -72563269 + MIR SINE MIR 81 262 0 25 65 0 0 chr18 14114338 14114384 -72563164 + AT_rich Low_complexity Low_complexity 1 46 0 2212 115 0 0 chr18 14117313 14117601 -72559947 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr18 14118001 14118024 -72559524 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 961 105 38 0 chr18 14118024 14118157 -72559391 - L1PA8 LINE L1 -15 6157 6020 243 296 136 8 chr18 14118234 14118366 -72559182 + MIR SINE MIR 77 225 -37 198 330 154 0 chr18 14118466 14118557 -72558991 - L3 LINE CR1 -2 1575 1471 2196 118 0 0 chr18 14120904 14121200 -72556348 + AluY SINE Alu 1 296 -15 916 322 60 37 chr18 14121861 14122458 -72555090 + L2 LINE L2 2366 2976 -338 260 174 0 0 chr18 14122866 14122912 -72554636 - L2 LINE L2 -1 3312 3267 269 216 8 149 chr18 14123786 14123920 -72553628 + MER5B DNA MER1_type 30 144 -34 412 297 16 16 chr18 14124720 14124848 -72552700 - MER5A DNA MER1_type -22 167 40 2616 143 23 46 chr18 14125257 14125426 -72552122 - L1MA7 LINE L1 0 6291 6120 183 100 0 0 chr18 14125426 14125456 -72552092 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 2128 123 0 0 chr18 14125461 14125753 -72551795 - AluSx SINE Alu -20 292 1 2616 143 23 46 chr18 14125753 14126058 -72551490 - L1MA7 LINE L1 -175 6116 5822 333 286 131 40 chr18 14127241 14127639 -72549909 + L2 LINE L2 2164 2597 -717 575 274 186 53 chr18 14127717 14128173 -72549375 - L2 LINE L2 -1437 1877 1361 541 294 47 62 chr18 14128231 14128506 -72549042 + L2 LINE L2 2919 3189 -124 2435 83 0 10 chr18 14129136 14129448 -72548100 - AluSc SINE Alu 0 309 1 255 125 0 0 chr18 14129467 14129507 -72548041 + (A)n Simple_repeat Simple_repeat 1 40 0 754 160 8 0 chr18 14131290 14131409 -72546139 + AluJb SINE Alu 2 121 -191 336 48 0 0 chr18 14131409 14131451 -72546097 + (TAAAA)n Simple_repeat Simple_repeat 2 43 0 28 71 0 0 chr18 14131756 14131812 -72545736 + AT_rich Low_complexity Low_complexity 1 56 0 1261 164 32 0 chr18 14132565 14132784 -72544764 + AluJb SINE Alu 85 310 -2 311 260 107 28 chr18 14132865 14133042 -72544506 + L1MC5 LINE L1 7000 7190 -771 479 263 81 87 chr18 14133123 14133861 -72543687 + L1MC5 LINE L1 7295 8013 -29 3961 159 20 31 chr18 14133959 14134689 -72542859 - MER50 LTR ERV1 -12 722 1 222 105 0 0 chr18 14135115 14135153 -72542395 + (CA)n Simple_repeat Simple_repeat 1 38 0 901 290 83 0 chr18 14135613 14135913 -72541635 - MER58B DNA MER1_type -8 333 9 321 207 0 0 chr18 14136315 14136397 -72541151 + A-rich Low_complexity Low_complexity 1 82 0 322 311 143 0 chr18 14136605 14136898 -72540650 - L1ME4a LINE L1 -22 6099 5765 1890 132 14 30 chr18 14138175 14138470 -72539078 + AluSx SINE Alu 1 290 -22 382 329 12 29 chr18 14140333 14140503 -72537045 + MIR SINE MIR 12 178 -84 1830 117 141 25 chr18 14141068 14141394 -72536154 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr18 14141984 14142007 -72535541 + AT_rich Low_complexity Low_complexity 1 23 0 2621 64 0 3 chr18 14142359 14142724 -72534824 - AluY SINE Alu 0 364 1 2006 143 14 3 chr18 14142726 14143020 -72534528 - AluSx SINE Alu -15 297 1 324 281 144 59 chr18 14144789 14145095 -72532453 - L2 LINE L2 -10 3262 2931 1746 85 0 16 chr18 14145372 14145619 -72531929 - L1PA11 LINE L1 0 6174 5932 293 304 27 27 chr18 14145641 14145753 -72531795 + L2 LINE L2 3138 3249 -23 913 247 107 47 chr18 14145776 14146225 -72531323 + MLT1H LTR MaLR 15 490 -59 321 68 0 0 chr18 14146225 14146269 -72531279 + (TTTTA)n Simple_repeat Simple_repeat 1 44 0 2839 81 0 0 chr18 14146269 14146638 -72530910 - L1PA8 LINE L1 -24 6148 5780 288 209 30 0 chr18 14146638 14146705 -72530843 + MLT1H LTR MaLR 482 550 -5 468 323 36 40 chr18 14146793 14147069 -72530479 - L3 LINE CR1 -170 1407 1133 21 0 0 0 chr18 14149882 14149903 -72527645 + AT_rich Low_complexity Low_complexity 1 21 0 243 155 28 14 chr18 14149985 14150056 -72527492 + (TA)n Simple_repeat Simple_repeat 1 72 0 370 204 19 0 chr18 14150697 14150800 -72526748 + CT-rich Low_complexity Low_complexity 2 106 0 2118 218 49 64 chr18 14150835 14151611 -72525937 - L1M4 LINE L1 -1212 4934 4171 288 0 0 0 chr18 14151613 14151645 -72525903 + (TG)n Simple_repeat Simple_repeat 1 32 0 1729 130 29 25 chr18 14151645 14151921 -72525627 - AluSg SINE Alu -33 277 1 285 347 14 20 chr18 14151956 14152103 -72525445 + MIR3 SINE MIR 46 191 -17 51 42 0 0 chr18 14152406 14152478 -72525070 + AT_rich Low_complexity Low_complexity 1 72 0 418 229 86 82 chr18 14152549 14152794 -72524754 + MARNA DNA Mariner 138 383 -203 1864 180 0 13 chr18 14152806 14153117 -72524431 + AluJo SINE Alu 1 307 -5 377 317 45 32 chr18 14155051 14155272 -72522276 + MIR SINE MIR 8 231 -31 194 306 153 0 chr18 14155596 14155694 -72521854 + MIR3 SINE MIR 83 195 -13 2216 101 59 34 chr18 14157546 14157901 -72519647 + THE1B LTR MaLR 1 364 0 30 0 0 0 chr18 14158660 14158690 -72518858 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr18 14158774 14158803 -72518745 + AT_rich Low_complexity Low_complexity 1 29 0 224 233 0 0 chr18 14159295 14159338 -72518210 + (TATG)n Simple_repeat Simple_repeat 2 44 0 21 0 0 0 chr18 14159405 14159426 -72518122 + AT_rich Low_complexity Low_complexity 1 21 0 1584 174 14 7 chr18 14161111 14161386 -72516162 - AluJo SINE Alu -13 299 23 252 298 43 11 chr18 14162328 14162422 -72515126 + MIR SINE MIR 67 163 -99 2272 105 0 20 chr18 14162939 14163245 -72514303 - AluSq SINE Alu -13 300 1 204 40 0 0 chr18 14165211 14165236 -72512312 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 210 321 12 12 chr18 14168244 14168325 -72509223 + MIR SINE MIR 68 148 -60 244 284 15 0 chr18 14172142 14172209 -72505339 + MER117 DNA MER1_type 34 101 -96 673 272 18 32 chr18 14172253 14172470 -72505078 + MIR SINE MIR 1 214 -48 356 164 45 15 chr18 14174345 14174412 -72503136 + Tigger2 DNA MER2_type 1 69 -2649 * 1350 122 61 30 chr18 14174410 14174673 -72502875 + Tigger2 DNA MER2_type 2280 2550 -168 472 211 17 117 chr18 14175282 14175468 -72502080 + MIR SINE MIR 2 175 -33 353 291 60 0 chr18 14175924 14176041 -72501507 + MIR SINE MIR 30 153 -55 579 213 41 2 chr18 14176768 14176990 -72500558 + MER58B DNA MER1_type 42 308 -33 1472 130 142 8 chr18 14176993 14177289 -72500259 + AluJb SINE Alu 2 330 0 320 200 0 0 chr18 14177386 14177451 -72500097 + MER53 DNA DNA 6 70 -119 3094 158 34 19 chr18 14177474 14178058 -72499490 - L1PB4 LINE L1 -13 6143 5551 229 200 90 30 chr18 14178351 14178451 -72499097 - MER53 DNA DNA -58 131 26 288 154 0 0 chr18 14178460 14178512 -72499036 + (TA)n Simple_repeat Simple_repeat 2 53 0 223 177 48 0 chr18 14178536 14178598 -72498950 + (TA)n Simple_repeat Simple_repeat 1 65 0 2535 69 3 0 chr18 14178933 14179239 -72498309 - AluY SINE Alu -4 307 1 439 255 64 34 chr18 14179284 14179488 -72498060 - L1ME4a LINE L1 -239 5882 5673 201 74 0 0 chr18 14179931 14179958 -72497590 + (T)n Simple_repeat Simple_repeat 1 27 0 201 74 0 0 chr18 14180261 14180288 -72497260 + (TG)n Simple_repeat Simple_repeat 2 28 0 972 189 0 0 chr18 14183537 14183706 -72493842 - FRAM SINE Alu -7 169 1 195 295 49 0 chr18 14183763 14183824 -72493724 + L2 LINE L2 3158 3221 -51 1376 215 133 39 chr18 14184264 14184652 -72492896 + L2 LINE L2 1572 2035 -1279 2494 91 3 0 chr18 14184652 14184961 -72492587 + AluSp SINE Alu 1 310 -3 1376 215 133 39 chr18 14184961 14185159 -72492389 + L2 LINE L2 2035 2213 -1101 2182 122 3 3 chr18 14185390 14185686 -72491862 + AluSg SINE Alu 1 296 -14 250 279 52 78 chr18 14186174 14186328 -72491220 + MIR SINE MIR 110 259 -3 2124 127 0 3 chr18 14187349 14187649 -72489899 + AluSx SINE Alu 3 301 -11 318 26 0 0 chr18 14188710 14188749 -72488799 + (CA)n Simple_repeat Simple_repeat 2 40 0 1275 83 0 0 chr18 14189334 14189490 -72488058 + AluY SINE Alu 127 282 -29 317 292 4 47 chr18 14190330 14190686 -72486862 + CT-rich Low_complexity Low_complexity 1 340 0 184 158 35 0 chr18 14190706 14190763 -72486785 + CT-rich Low_complexity Low_complexity 2 60 0 357 242 8 63 chr18 14190825 14191187 -72486361 + CT-rich Low_complexity Low_complexity 1 341 0 218 139 0 82 chr18 14191237 14191359 -72486189 + (TCC)n Simple_repeat Simple_repeat 2 113 0 201 167 7 67 chr18 14191409 14191559 -72485989 + CT-rich Low_complexity Low_complexity 2 142 0 389 229 21 39 chr18 14191607 14192141 -72485407 + CT-rich Low_complexity Low_complexity 1 524 0 378 279 204 0 chr18 14192950 14193122 -72484426 - MIR SINE MIR -29 233 27 206 217 0 33 chr18 14195009 14195069 -72482479 + T-rich Low_complexity Low_complexity 3 60 0 207 0 0 0 chr18 14196655 14196678 -72480870 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 353 362 51 75 chr18 14196681 14197015 -72480533 - L2 LINE L2 -15 3257 2932 185 32 0 65 chr18 14198448 14198479 -72479069 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 26 23 0 23 chr18 14198479 14198490 -72479058 + AT_rich Low_complexity Low_complexity 1 11 -32 1534 147 60 56 chr18 14198490 14198775 -72478773 - AluJo SINE Alu -26 286 1 26 23 0 23 chr18 14198775 14198807 -72478741 + AT_rich Low_complexity Low_complexity 11 43 0 203 359 78 7 chr18 14200594 14200736 -72476812 + L2 LINE L2 1979 2130 -1184 1620 234 22 8 chr18 14201033 14201392 -72476156 - MLT1A1 LTR MaLR -1 364 1 649 313 190 38 chr18 14201572 14202899 -72474649 - L2 LINE L2 -421 2893 1365 378 338 49 20 chr18 14204045 14204249 -72473299 + MIR SINE MIR 40 249 -13 181 331 66 25 chr18 14204317 14204438 -72473110 - MIR3 SINE MIR -78 130 5 279 0 0 0 chr18 14205123 14205154 -72472394 + (CA)n Simple_repeat Simple_repeat 2 32 0 2428 35 0 7 chr18 14205762 14206081 -72471467 - AluY SINE Alu 0 317 1 241 125 36 0 chr18 14210546 14210602 -72466946 + (TTG)n Simple_repeat Simple_repeat 2 59 0 227 284 30 0 chr18 14213537 14213604 -72463944 - MER5A DNA MER1_type -80 109 41 185 173 67 133 chr18 14214122 14214197 -72463351 - L2 LINE L2 -2114 1200 1131 2498 53 3 0 chr18 14214205 14214504 -72463044 + AluY SINE Alu 1 300 -11 369 0 0 0 chr18 14216734 14216775 -72460773 + (TA)n Simple_repeat Simple_repeat 1 41 0 2412 65 0 0 chr18 14216927 14217221 -72460327 + AluY SINE Alu 1 294 -17 882 317 58 38 chr18 14217475 14218095 -72459453 + L1MC4a LINE L1 5257 5809 -353 2400 91 7 0 chr18 14218302 14218611 -72458937 - AluSx SINE Alu -1 311 1 1560 176 13 33 chr18 14218725 14219026 -72458522 + AluJo SINE Alu 9 303 -9 495 48 0 0 chr18 14219120 14219182 -72458366 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 1965 137 0 23 chr18 14219182 14219482 -72458066 - AluSx SINE Alu -19 293 1 23 54 0 0 chr18 14219484 14219521 -72458027 + AT_rich Low_complexity Low_complexity 1 37 0 203 352 34 0 chr18 14220091 14220179 -72457369 - MIR SINE MIR -18 244 154 715 281 167 57 chr18 14221218 14222525 -72455023 - L2 LINE L2 -8 3305 1828 442 99 41 41 chr18 14225062 14225233 -72452315 + (TATAA)n Simple_repeat Simple_repeat 1 171 0 306 149 48 19 chr18 14225233 14225445 -72452103 + (TA)n Simple_repeat Simple_repeat 1 218 0 32 57 0 0 chr18 14225485 14225538 -72452010 + AT_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr18 14226056 14226078 -72451470 + AT_rich Low_complexity Low_complexity 1 22 0 2293 101 0 3 chr18 14226118 14226414 -72451134 - AluSg SINE Alu -15 295 1 32 26 0 0 chr18 14226592 14226631 -72450917 + AT_rich Low_complexity Low_complexity 1 39 0 1983 143 17 0 chr18 14226640 14226933 -72450615 + AluSx SINE Alu 1 298 -14 2444 64 7 0 chr18 14228971 14229267 -72448281 + AluY SINE Alu 1 298 -13 251 330 131 23 chr18 14231246 14231422 -72446126 - MIR SINE MIR -21 241 47 241 226 0 0 chr18 14234130 14234183 -72443365 + GA-rich Low_complexity Low_complexity 2 54 0 512 198 11 0 chr18 14235356 14235447 -72442101 - Tigger7 DNA MER2_type 0 2587 2496 * 3039 163 19 23 chr18 14235441 14235968 -72441580 - Tigger7 DNA MER2_type -208 525 1 1781 155 44 0 chr18 14236576 14236847 -72440701 + AluSx SINE Alu 5 287 -25 272 185 0 15 chr18 14236847 14236912 -72440636 + GA-rich Low_complexity Low_complexity 1 64 0 350 224 0 0 chr18 14236924 14236991 -72440557 + AluJ/FRAM SINE Alu 233 299 -3 189 0 0 0 chr18 14237009 14237030 -72440518 + (GGAA)n Simple_repeat Simple_repeat 1 21 0 396 169 0 0 chr18 14240562 14240639 -72436909 + G-rich Low_complexity Low_complexity 1 77 0 215 289 123 70 chr18 14240714 14240828 -72436720 - L2 LINE L2 -7 3265 3146 213 284 78 52 chr18 14241127 14241243 -72436305 - MER5A DNA MER1_type -3 186 68 456 158 48 20 chr18 14241255 14241401 -72436147 + CT-rich Low_complexity Low_complexity 4 153 0 225 314 14 0 chr18 14241523 14241593 -72435955 + MIR SINE MIR 101 171 -91 188 226 29 108 chr18 14242329 14242431 -72435117 + L2 LINE L2 2938 3031 -241 535 73 10 83 chr18 14242975 14243071 -72434477 - AluSg SINE Alu 0 312 224 1353 76 0 6 chr18 14243071 14243243 -72434305 - AluSg SINE Alu -139 171 1 400 281 71 42 chr18 14243537 14243775 -72433773 + L2 LINE L2 2327 2571 -743 243 326 110 76 chr18 14243987 14244422 -72433126 + L2 LINE L2 2823 3272 0 205 220 150 50 chr18 14245177 14245277 -72432271 + MIR SINE MIR 139 248 -14 417 285 109 59 chr18 14245469 14245559 -72431989 - MIR SINE MIR -12 250 166 2429 70 0 3 chr18 14245559 14245860 -72431688 - AluY SINE Alu -11 300 1 417 285 109 59 chr18 14245860 14245918 -72431630 - MIR SINE MIR -96 166 112 1893 148 7 3 chr18 14245918 14246255 -72431293 - AluSx SINE Alu 0 338 1 417 285 109 59 chr18 14246255 14246325 -72431223 - MIR SINE MIR -150 112 19 615 171 16 8 chr18 14247551 14247674 -72429874 - L1MA10 LINE L1 0 6334 6211 3013 134 0 20 chr18 14247674 14248115 -72429433 - MSTB1 LTR MaLR 0 432 1 377 93 0 0 chr18 14248137 14248191 -72429357 - MADE1 DNA Mariner 0 80 27 1962 116 46 3 chr18 14248225 14248510 -72429038 - AluSc SINE Alu -11 298 2 2224 171 40 12 chr18 14248538 14248965 -72428583 - L1MEc LINE L1 -4480 1904 1466 616 241 37 148 chr18 14248955 14249307 -72428241 - L1MEc LINE L1 -6049 514 202 * 211 322 87 26 chr18 14250944 14251059 -72426489 + L2 LINE L2 3146 3267 -5 2277 108 0 0 chr18 14252341 14252646 -72424902 + AluSx SINE Alu 2 306 -6 209 261 15 31 chr18 14253875 14253940 -72423608 + MIR SINE MIR 41 104 -104 2008 110 60 0 chr18 14254563 14254845 -72422703 + AluSx SINE Alu 1 299 -13 1890 192 18 0 chr18 14255153 14255492 -72422056 - MLT1A1 LTR MaLR -6 359 15 611 246 156 15 chr18 14255953 14256152 -72421396 - MIR SINE MIR -2 260 34 1208 161 69 0 chr18 14256152 14256369 -72421179 + L1MA3 LINE L1 6074 6305 0 259 314 36 51 chr18 14257479 14257616 -72419932 - MER5A DNA MER1_type 0 189 55 342 237 11 32 chr18 14257854 14257947 -72419601 + MIR SINE MIR 64 154 -108 565 104 0 0 chr18 14258126 14258203 -72419345 - Alu SINE Alu -7 305 229 1277 111 12 0 chr18 14258203 14258374 -72419174 - AluSq SINE Alu -140 173 1 187 254 25 123 chr18 14258432 14258554 -72418994 + MER5B DNA MER1_type 1 110 -68 6722 164 26 48 chr18 14258583 14261064 -72416484 - L1MA3 LINE L1 0 6305 3949 237 33 0 0 chr18 14262169 14262199 -72415349 + (CAAAAA)n Simple_repeat Simple_repeat 2 31 0 206 258 15 0 chr18 14263223 14263289 -72414259 + (TA)n Simple_repeat Simple_repeat 2 68 0 6179 181 159 56 chr18 14263305 14264393 -72413155 + L1MC3 LINE L1 5849 6824 -961 273 236 28 14 chr18 14264393 14264465 -72413083 + MLT1F1 LTR MaLR 61 133 -434 2321 120 0 0 chr18 14264467 14264776 -72412772 + AluSx SINE Alu 1 309 -3 6179 181 159 56 chr18 14264776 14265155 -72412393 + L1MC3 LINE L1 6824 7163 -622 2270 110 0 0 chr18 14265155 14265455 -72412093 + AluSx SINE Alu 1 300 -12 6179 181 159 56 chr18 14265455 14265655 -72411893 + L1MC3 LINE L1 7163 7770 -15 238 213 0 0 chr18 14266132 14266179 -72411369 + L1ME LINE L1 5777 5823 -347 22 80 0 0 chr18 14267067 14267117 -72410431 + AT_rich Low_complexity Low_complexity 1 50 0 327 265 68 8 chr18 14268076 14268193 -72409355 + MER5C DNA MER1_type 1 124 -200 1894 291 112 45 chr18 14268941 14270559 -72406989 + L1MEc LINE L1 69 1794 -4602 245 236 36 0 chr18 14270719 14270774 -72406774 + MLT1L LTR MaLR 480 536 -79 2341 84 7 0 chr18 14272379 14272676 -72404872 - AluY SINE Alu -12 299 1 381 231 213 0 chr18 14273189 14273297 -72404251 - MER5A DNA MER1_type 0 189 59 229 208 30 50 chr18 14273703 14273804 -72403744 - L1ME LINE L1 -366 5755 5657 475 264 69 29 chr18 14274857 14275031 -72402517 - MIR SINE MIR -71 191 11 2320 82 0 7 chr18 14276053 14276346 -72401202 + AluY SINE Alu 5 295 -16 3682 146 38 51 chr18 14276358 14277041 -72400507 + L1MB2 LINE L1 5446 6121 -50 2174 82 14 3 chr18 14277041 14277333 -72400215 + AluSg SINE Alu 3 297 -13 3682 146 38 51 chr18 14277333 14277380 -72400168 + L1MB2 LINE L1 6121 6167 -4 1587 119 33 12 chr18 14277779 14278022 -72399526 - L1PA15 LINE L1 -6 6159 5912 2628 43 0 0 chr18 14278185 14278488 -72399060 + AluY SINE Alu 1 303 -8 193 337 47 12 chr18 14280629 14280715 -72396833 - L3 LINE CR1 -2 1575 1487 210 163 0 0 chr18 14280725 14280751 -72396797 + GA-rich Low_complexity Low_complexity 2 30 -14 2465 88 3 0 chr18 14280751 14281057 -72396491 + AluSc SINE Alu 2 308 -1 210 163 0 0 chr18 14281057 14281073 -72396475 + GA-rich Low_complexity Low_complexity 29 44 0 1722 196 0 10 chr18 14281926 14282232 -72395316 + AluJo SINE Alu 1 303 -9 213 255 43 21 chr18 14282807 14282901 -72394647 + (CATATA)n Simple_repeat Simple_repeat 3 98 0 361 267 87 35 chr18 14283491 14283663 -72393885 - MIR SINE MIR -60 202 22 228 343 78 18 chr18 14284223 14284389 -72393159 - L2 LINE L2 -2 3311 3136 234 297 0 0 chr18 14284720 14284794 -72392754 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 2233 91 0 7 chr18 14284794 14285079 -72392469 - AluSq SINE Alu -23 290 8 409 269 93 80 chr18 14287071 14287436 -72390112 - L2 LINE L2 -2 3311 2942 217 222 48 32 chr18 14287497 14287560 -72389988 - L2 LINE L2 -490 2824 2761 339 305 200 0 chr18 14288248 14288448 -72389100 - MIR SINE MIR 0 262 23 614 307 68 18 chr18 14288896 14289189 -72388359 + MLT1F1 LTR MaLR 2 304 -263 24 0 0 0 chr18 14289284 14289308 -72388240 + AT_rich Low_complexity Low_complexity 1 24 0 2294 101 0 0 chr18 14289546 14289843 -72387705 - AluY SINE Alu -14 297 1 2466 59 10 3 chr18 14291480 14291783 -72385765 - AluY SINE Alu -6 305 1 22 35 0 0 chr18 14291963 14291992 -72385556 + AT_rich Low_complexity Low_complexity 1 29 0 1774 120 0 30 chr18 14293082 14293348 -72384200 + AluJo SINE Alu 1 258 -54 1746 161 0 38 chr18 14293774 14294066 -72383482 - AluJo SINE Alu -31 281 1 2095 137 3 0 chr18 14294068 14294368 -72383180 - AluSx SINE Alu -11 301 1 426 327 53 56 chr18 14295840 14296216 -72381332 + HERV16 LTR ERVL 3 377 -4619 402 256 0 0 chr18 14296191 14296273 -72381275 + HERV16 LTR ERVL 1182 1263 -3733 * 3359 117 35 100 chr18 14296273 14296921 -72380627 + MER4B LTR ERV1 1 606 -4 180 152 0 0 chr18 14298508 14298541 -72379007 + CT-rich Low_complexity Low_complexity 1 33 0 1445 282 107 8 chr18 14299016 14299650 -72377898 + L1MCc LINE L1 839 1535 -4888 234 295 0 13 chr18 14300813 14300891 -72376657 - MIR SINE MIR -70 192 116 7751 37 5 0 chr18 14301261 14302439 -72375109 - L1PA4 LINE L1 -1 6154 4996 2292 112 3 0 chr18 14303245 14303550 -72373998 + AluSq SINE Alu 1 306 -7 297 296 71 20 chr18 14304453 14304551 -72372997 + L2 LINE L2 3170 3272 0 312 274 164 7 chr18 14304871 14305017 -72372531 - MIR SINE MIR -92 170 2 391 246 110 17 chr18 14305297 14305415 -72372133 + L2 LINE L2 3184 3312 -1 2114 96 4 0 chr18 14305461 14305733 -72371815 + AluSc SINE Alu 1 273 -36 267 79 0 0 chr18 14305836 14305874 -72371674 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 2488 83 0 0 chr18 14306756 14307056 -72370492 - AluSx SINE Alu -12 300 1 2487 58 0 0 chr18 14307306 14307597 -72369951 - AluY SINE Alu -4 307 17 207 197 14 28 chr18 14308251 14308322 -72369226 + GA-rich Low_complexity Low_complexity 3 72 0 1910 59 4 16 chr18 14308667 14308922 -72368626 + AluY SINE Alu 49 300 -11 1332 94 0 0 chr18 14309093 14309264 -72368284 + AluSg SINE Alu 1 171 -139 1262 127 4 57 chr18 14309841 14310021 -72367527 - L1MA4 LINE L1 -6 6294 6127 2006 127 10 14 chr18 14310021 14310313 -72367235 - AluSx SINE Alu -21 291 1 1262 127 4 57 chr18 14310313 14310361 -72367187 - L1MA4 LINE L1 -173 6127 6078 2432 46 3 10 chr18 14310401 14310708 -72366840 - AluY SINE Alu -6 305 1 808 220 173 58 chr18 14310824 14311224 -72366324 + MER92B LTR ERV1 191 636 0 2262 112 3 0 chr18 14311909 14312205 -72365343 + AluSx SINE Alu 1 297 -15 374 134 62 62 chr18 14313188 14313285 -72364263 + MER53 DNA DNA 90 186 -3 29 28 0 0 chr18 14313299 14313335 -72364213 + AT_rich Low_complexity Low_complexity 1 36 0 2300 76 28 3 chr18 14314860 14315150 -72362398 - AluSc SINE Alu -12 297 1 373 271 38 30 chr18 14317869 14318002 -72359546 - MLT1K LTR MaLR -267 321 188 358 128 0 0 chr18 14318303 14318350 -72359198 - AluS SINE Alu -235 67 21 414 57 0 0 chr18 14318781 14318834 -72358714 + (TG)n Simple_repeat Simple_repeat 1 53 0 1110 106 0 47 chr18 14318834 14319004 -72358544 - AluSg/x SINE Alu -33 277 116 309 298 65 30 chr18 14319590 14319758 -72357790 + MLT1I LTR MaLR 190 363 -46 544 289 101 18 chr18 14319900 14320118 -72357430 + MLT1K LTR MaLR 187 422 -166 1151 55 7 0 chr18 14321073 14321242 -72356306 - AluY SINE Alu 0 308 139 1426 36 0 0 chr18 14322224 14322390 -72355158 - AluY SINE Alu -2 309 144 242 321 71 12 chr18 14322457 14322541 -72355007 + L2 LINE L2 3206 3294 -19 1564 125 0 0 chr18 14322622 14322846 -72354702 - AluSq SINE Alu -9 304 81 299 224 146 29 chr18 14322905 14323041 -72354507 - MIR SINE MIR -66 142 37 265 361 57 25 chr18 14325045 14325203 -72352345 + MIR3 SINE MIR 23 185 -23 1247 232 81 3 chr18 14325779 14326089 -72351459 + MER58B DNA MER1_type 1 334 -7 756 258 62 8 chr18 14326639 14326879 -72350669 + L1ME4a LINE L1 5604 5856 -265 270 0 0 0 chr18 14326892 14326922 -72350626 + (CA)n Simple_repeat Simple_repeat 2 31 0 425 187 22 0 chr18 14327052 14327143 -72350405 + MSTD LTR MaLR 65 157 -239 32 26 0 0 chr18 14327229 14327268 -72350280 + AT_rich Low_complexity Low_complexity 1 39 0 1872 142 3 24 chr18 14327268 14327564 -72349984 - AluJo SINE Alu -22 290 1 375 273 101 46 chr18 14327570 14327925 -72349623 - L1ME LINE L1 -307 5814 5405 2073 126 27 0 chr18 14327925 14328219 -72349329 - AluSx SINE Alu -10 302 1 375 273 101 46 chr18 14328219 14328465 -72349083 - L1ME LINE L1 -716 5405 5174 2541 54 0 0 chr18 14329061 14329355 -72348193 - AluY SINE Alu -17 294 1 251 310 58 76 chr18 14330119 14330290 -72347258 - MIR SINE MIR -59 203 36 21 36 0 0 chr18 14330821 14330849 -72346699 + AT_rich Low_complexity Low_complexity 1 28 0 208 322 0 0 chr18 14330899 14330958 -72346590 + GA-rich Low_complexity Low_complexity 3 61 0 204 260 26 39 chr18 14331042 14331119 -72346429 + L2 LINE L2 3238 3313 0 2549 38 3 0 chr18 14331301 14331594 -72345954 + AluY SINE Alu 1 294 -17 2076 175 31 0 chr18 14332010 14332364 -72345184 + MLT1A1 LTR MaLR 1 365 0 183 279 81 12 chr18 14333172 14333258 -72344290 + L2 LINE L2 3161 3252 -61 351 329 7 0 chr18 14333652 14333804 -72343744 - LTR33 LTR ERVL -14 507 355 * 407 272 129 0 chr18 14333799 14333946 -72343602 - LTR33 LTR ERVL -352 169 4 214 323 24 57 chr18 14334172 14334296 -72343252 + MER5A DNA MER1_type 68 187 -2 405 240 10 10 chr18 14336458 14336554 -72340994 - Charlie8 DNA MER1_type -2217 200 105 273 246 17 68 chr18 14336563 14336681 -72340867 - LTR33A LTR ERVL -8 515 404 182 62 31 0 chr18 14337219 14337251 -72340297 + (CGGGG)n Simple_repeat Simple_repeat 3 35 0 713 208 44 25 chr18 14337666 14337825 -72339723 + FRAM SINE Alu 10 171 -5 2080 109 0 7 chr18 14338211 14338505 -72339043 - AluSx SINE Alu -20 292 1 186 293 163 0 chr18 14339137 14339260 -72338288 + MIR SINE MIR 64 206 -56 2403 59 3 3 chr18 14339300 14339607 -72337941 - AluY SINE Alu -4 307 1 27 49 0 0 chr18 14340497 14340538 -72337010 + AT_rich Low_complexity Low_complexity 1 41 0 371 223 116 33 chr18 14340663 14340784 -72336764 - MIR SINE MIR 0 262 132 874 188 15 51 chr18 14341227 14341424 -72336124 + AluJo SINE Alu 1 190 -122 1626 240 81 63 chr18 14391424 14392164 -72285384 + L1M4 LINE L1 2677 3438 -2708 2473 77 0 0 chr18 14392164 14392475 -72285073 + AluY SINE Alu 1 311 0 1626 240 81 63 chr18 14392475 14392650 -72284898 + L1M4 LINE L1 3438 3608 -2538 2595 64 0 0 chr18 14392656 14392967 -72284581 + AluY SINE Alu 1 311 0 417 269 108 24 chr18 14393053 14393220 -72284328 + L1MC4a LINE L1 6548 6728 -1080 607 261 43 11 chr18 14393334 14393522 -72284026 + MLT1E2 LTR MaLR 422 615 -11 264 296 28 46 chr18 14394232 14394340 -72283208 + MIR SINE MIR 49 154 -108 335 358 58 12 chr18 14394825 14395082 -72282466 - LTR67 LTR ERVL -253 304 36 2665 134 51 57 chr18 14395989 14396143 -72281405 + L1MC1 LINE L1 5813 5966 -367 2319 92 3 13 chr18 14396143 14396457 -72281091 + AluSq SINE Alu 1 311 -2 2665 134 51 57 chr18 14396457 14396808 -72280740 + L1MC1 LINE L1 5966 6315 -18 21 57 0 0 chr18 14397460 14397495 -72280053 + AT_rich Low_complexity Low_complexity 1 35 0 324 0 0 0 chr18 14397861 14397897 -72279651 + (TA)n Simple_repeat Simple_repeat 2 37 0 1117 122 6 0 chr18 14398358 14398530 -72279018 + AluY SINE Alu 139 311 0 762 286 60 20 chr18 14398616 14398972 -72278576 + L1MC4 LINE L1 6548 7010 -897 437 244 57 71 chr18 14398974 14399024 -72278524 + L1MC4 LINE L1 7551 7600 -442 2053 108 41 7 chr18 14399024 14399319 -72278229 + AluSx SINE Alu 1 305 -7 437 244 57 71 chr18 14399319 14399531 -72278017 + L1MC4 LINE L1 7600 7918 -124 254 266 36 65 chr18 14399563 14399579 -72277969 + L1MC4 LINE L1 7902 7917 -125 195 42 0 0 chr18 14399579 14399603 -72277945 + (CAGAGA)n Simple_repeat Simple_repeat 6 29 0 254 266 36 65 chr18 14399603 14399725 -72277823 + L1MC4 LINE L1 7917 8036 -6 446 269 0 69 chr18 14401775 14401826 -72275722 + L2 LINE L2 3138 3191 -81 2141 67 15 0 chr18 14401826 14402094 -72275454 - AluY SINE Alu 0 311 40 446 269 0 69 chr18 14402094 14402187 -72275361 + L2 LINE L2 3191 3272 0 295 333 69 29 chr18 14402248 14402422 -72275126 - MIR SINE MIR -19 243 63 330 26 0 0 chr18 14402842 14402881 -72274667 + (TC)n Simple_repeat Simple_repeat 1 39 0 2304 54 20 3 chr18 14402881 14403176 -72274372 - AluY SINE Alu -11 300 1 22 0 0 0 chr18 14404316 14404338 -72273210 + AT_rich Low_complexity Low_complexity 1 22 0 1871 173 7 0 chr18 14404342 14404648 -72272900 + AluJo SINE Alu 5 312 0 22 0 0 0 chr18 14404648 14404670 -72272878 + AT_rich Low_complexity Low_complexity 1 22 0 4654 53 4 0 chr18 14406217 14406762 -72270786 - L1PA7 LINE L1 -1 6153 5607 256 167 28 0 chr18 14407005 14407077 -72270471 + (TA)n Simple_repeat Simple_repeat 1 74 0 419 228 93 93 chr18 14407816 14407899 -72269649 + MER112 DNA MER1_type 10 92 -168 2264 97 0 0 chr18 14407899 14408209 -72269339 - AluY SINE Alu 0 310 1 419 228 93 93 chr18 14408209 14408317 -72269231 + MER112 DNA MER1_type 91 202 -58 2254 104 0 0 chr18 14409274 14409563 -72267985 - AluSq SINE Alu -22 291 3 862 173 0 0 chr18 14409968 14410101 -72267447 - FLAM_C SINE Alu 0 133 1 276 107 53 120 chr18 14410723 14410798 -72266750 + L1MA7 LINE L1 6221 6290 -1 1503 242 91 36 chr18 14412240 14412715 -72264833 + MLT1D LTR MaLR 4 504 -1 1614 195 20 0 chr18 14412947 14413239 -72264309 + MLT1A1 LTR MaLR 62 359 -6 196 273 23 0 chr18 14413242 14413286 -72264262 - MIR SINE MIR -1 261 217 547 261 81 5 chr18 14413736 14413947 -72263601 - SST1 Satellite centromeric -150 1413 1187 345 316 71 19 chr18 14413949 14414104 -72263444 - MIR SINE MIR -55 207 45 407 288 14 27 chr18 14414183 14414329 -72263219 - L2 LINE L2 -1 3312 3169 183 273 55 18 chr18 14414319 14414374 -72263174 - L2 LINE L2 -10 3303 3247 * 206 207 17 0 chr18 14415572 14415630 -72261918 + (TA)n Simple_repeat Simple_repeat 1 59 0 392 67 17 0 chr18 14415691 14415751 -72261797 + (CA)n Simple_repeat Simple_repeat 2 62 0 25 65 0 0 chr18 14416633 14416679 -72260869 + AT_rich Low_complexity Low_complexity 1 46 0 462 242 33 26 chr18 14417417 14417570 -72259978 - L1MDb LINE L1 -3376 3164 3011 1592 229 38 17 chr18 14417585 14417608 -72259940 - L1MDb LINE L1 -3843 2697 2676 2602 39 0 23 chr18 14417608 14417918 -72259630 - AluY SINE Alu -8 303 1 1592 229 38 17 chr18 14417918 14418397 -72259151 - L1MDb LINE L1 -3864 2676 2191 207 250 0 0 chr18 14418398 14418438 -72259110 + (TG)n Simple_repeat Simple_repeat 1 40 0 250 100 0 20 chr18 14418438 14418488 -72259060 - LTR66 LTR ERVL -172 438 390 2070 208 66 112 chr18 14418493 14419625 -72257923 - L1MDb LINE L1 -4364 2176 1119 2446 67 0 0 chr18 14419625 14419922 -72257626 - AluSx SINE Alu -15 297 1 2070 208 66 112 chr18 14419922 14420202 -72257346 - L1MDb LINE L1 -5421 1119 828 244 333 67 11 chr18 14420264 14420354 -72257194 - L1MDb LINE L1 -5647 896 802 502 269 51 46 chr18 14420581 14420756 -72256792 - L1MDb LINE L1 -6197 343 168 294 193 14 184 chr18 14420752 14420964 -72256584 - L1MEc LINE L1 -5831 565 390 * 393 253 0 0 chr18 14421107 14421194 -72256354 + L1ME LINE L1 5592 5678 -488 * 2242 238 43 13 chr18 14421191 14421872 -72255676 - L1MEc LINE L1 -1056 5159 4459 1243 261 79 30 chr18 14421881 14421921 -72255627 - L1MEc LINE L1 -2369 3846 3809 2409 65 0 7 chr18 14421921 14422213 -72255335 + AluY SINE Alu 1 290 -21 1243 261 79 30 chr18 14422213 14422704 -72254844 - L1MEc LINE L1 -2406 3809 3289 1012 207 55 8 chr18 14422687 14422943 -72254605 - L1MEc LINE L1 -3183 3032 2765 * 1263 235 44 15 chr18 14422944 14423285 -72254263 - L1MEc LINE L1 -5797 599 249 3187 240 103 31 chr18 14423293 14423498 -72254050 - Charlie1a DNA MER1_type -1597 1164 975 2359 92 3 0 chr18 14423498 14423804 -72253744 - AluY SINE Alu -4 307 1 3187 240 103 31 chr18 14423804 14424675 -72252873 - Charlie1a DNA MER1_type -1786 975 10 411 21 0 0 chr18 14424953 14425001 -72252547 + (TA)n Simple_repeat Simple_repeat 2 49 0 667 230 186 56 chr18 14425281 14425704 -72251844 - MLT1E2 LTR MaLR -175 449 2 232 323 45 65 chr18 14425717 14425863 -72251685 + MIR SINE MIR 66 208 -54 2065 121 0 3 chr18 14425863 14426153 -72251395 + AluSx SINE Alu 1 289 -23 232 323 45 65 chr18 14426153 14426207 -72251341 + MIR SINE MIR 208 262 0 189 206 111 48 chr18 14426215 14426278 -72251270 + MIR SINE MIR 190 256 -6 6237 210 77 115 chr18 14426547 14427238 -72250310 + L1ME1 LINE L1 2410 3126 -3020 1896 206 97 95 chr18 14427238 14427890 -72249658 + MLT1E1 LTR MaLR 2 654 0 6237 210 77 115 chr18 14427890 14428295 -72249253 + L1ME1 LINE L1 3126 3545 -2601 1059 178 0 11 chr18 14428295 14428475 -72249073 + FRAM SINE Alu 1 174 -2 6237 210 77 115 chr18 14428475 14429141 -72248407 + L1ME1 LINE L1 3545 4235 -1911 1817 66 4 0 chr18 14429141 14429368 -72248180 + AluY SINE Alu 78 305 -6 6237 210 77 115 chr18 14429368 14429564 -72247984 + L1ME1 LINE L1 4235 4437 -1709 594 152 0 0 chr18 14429564 14429656 -72247892 + AluY SINE Alu 213 304 -7 6237 210 77 115 chr18 14429656 14430308 -72247240 + L1ME1 LINE L1 4437 5170 -976 2534 73 0 0 chr18 14430308 14430610 -72246938 + AluY SINE Alu 1 302 -9 6237 210 77 115 chr18 14430610 14430797 -72246751 + L1ME1 LINE L1 5170 5363 -783 1743 214 113 7 chr18 14430798 14431205 -72246343 + L1ME1 LINE L1 5438 5887 -279 409 134 15 15 chr18 14431284 14431351 -72246197 + Tigger5 DNA MER2_type 2254 2320 -3 271 169 271 0 chr18 14431354 14431413 -72246135 - Tigger5 DNA MER2_type -2248 75 1 315 260 40 67 chr18 14431413 14431563 -72245985 + L1ME1 LINE L1 5905 6050 -116 1194 339 46 26 chr18 14431564 14432168 -72245380 - HERVL LTR ERVL -2089 3396 2781 2196 100 4 0 chr18 14432758 14433039 -72244509 + AluSg SINE Alu 1 282 -28 391 332 77 44 chr18 14433352 14433716 -72243832 - MLT1K LTR MaLR -19 569 194 414 108 0 0 chr18 14434109 14434174 -72243374 + (TCCA)n Simple_repeat Simple_repeat 3 67 0 403 299 33 8 chr18 14434174 14434329 -72243219 - MER5B DNA MER1_type -28 161 4 2246 108 0 3 chr18 14434793 14435090 -72242458 - AluSq SINE Alu -17 296 1 238 373 103 14 chr18 14436223 14436572 -72240976 - L2 LINE L2 -699 2615 2236 630 312 73 37 chr18 14437355 14437924 -72239624 + L1MC4a LINE L1 5262 5837 -359 2644 17 0 0 chr18 14437976 14438263 -72239285 - AluYa5 SINE Alu -5 306 20 991 209 10 2 chr18 14441451 14441746 -72235802 + MER7A DNA MER2_type 1 346 0 248 195 24 49 chr18 14441811 14441893 -72235655 + L1ME4a LINE L1 3711 3790 -2356 1023 151 0 23 chr18 14441893 14442065 -72235483 + AluSg/x SINE Alu 136 303 -9 2925 270 40 8 chr18 14442068 14443123 -72234425 + L1ME4a LINE L1 3784 4871 -1275 440 249 127 19 chr18 14443280 14443485 -72234063 + L1ME4a LINE L1 5881 6107 -14 305 256 135 78 chr18 14445541 14445781 -72231767 + MIR SINE MIR 12 261 -1 239 269 140 55 chr18 14445796 14445951 -72231597 - MIR SINE MIR -45 163 39 562 190 40 27 chr18 14446503 14446706 -72230842 - LTR37A LTR ERV1 0 426 252 255 196 0 0 chr18 14446880 14446936 -72230612 + L1MA9 LINE L1 6257 6312 0 2270 56 7 0 chr18 14447065 14447353 -72230195 - L1PA5 LINE L1 -1 6153 5864 22 0 0 0 chr18 14447450 14447472 -72230076 + AT_rich Low_complexity Low_complexity 1 22 0 203 155 84 28 chr18 14448271 14448413 -72229135 + (TA)n Simple_repeat Simple_repeat 2 151 0 609 14 0 0 chr18 14448533 14448603 -72228945 + (CA)n Simple_repeat Simple_repeat 1 70 0 686 151 0 0 chr18 14448603 14448709 -72228839 + MER1B DNA MER1_type 69 174 -123 617 252 19 23 chr18 14448957 14449215 -72228333 + L1M4 LINE L1 4232 4488 -1658 1482 218 47 21 chr18 14449225 14449610 -72227938 + L1MC2 LINE L1 5918 6312 -32 1087 209 94 36 chr18 14450552 14450725 -72226823 + MLT2B1 LTR ERVL 1 163 -352 2129 139 0 35 chr18 14450725 14451071 -72226477 + MER1B DNA MER1_type 4 337 0 1087 209 94 36 chr18 14451071 14451268 -72226280 + MLT2B1 LTR ERVL 163 440 -75 222 37 0 0 chr18 14451305 14451332 -72226216 + (TG)n Simple_repeat Simple_repeat 2 28 0 259 275 22 0 chr18 14451366 14451457 -72226091 - L1MC4 LINE L1 -1336 6706 6614 240 184 0 0 chr18 14451457 14451506 -72226042 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 278 135 77 0 chr18 14451515 14451567 -72225981 + MLT2B1 LTR ERVL 465 520 0 203 312 55 73 chr18 14451812 14451921 -72225627 + L2 LINE L2 3139 3245 -27 2320 57 0 30 chr18 14452667 14452965 -72224583 - AluY SINE Alu -22 289 1 2267 171 42 15 chr18 14453688 14454169 -72223379 - L1MA7 LINE L1 -1 6290 5797 240 182 65 13 chr18 14454342 14454496 -72223052 + (TA)n Simple_repeat Simple_repeat 1 162 0 2120 112 3 3 chr18 14455895 14456199 -72221349 - AluSx SINE Alu -8 304 1 21 0 0 0 chr18 14456215 14456236 -72221312 + AT_rich Low_complexity Low_complexity 1 21 0 276 272 58 10 chr18 14457395 14457498 -72220050 - MER103 DNA DNA -19 147 40 1170 241 52 32 chr18 14457548 14457950 -72219598 + LTR53 LTR ERVL 96 505 -14 495 190 121 0 chr18 14458104 14458220 -72219328 - MER7A DNA MER2_type -218 128 1 1809 175 48 0 chr18 14458797 14459128 -72218420 + MER7A DNA MER2_type 1 345 -1 1404 216 58 6 chr18 14459382 14459882 -72217666 + L1M4 LINE L1 2823 3348 -2798 347 218 194 14 chr18 14459882 14460093 -72217455 - L1M4 LINE L1 -1563 4583 4335 668 243 34 0 chr18 14460185 14460391 -72217157 + L1M4 LINE L1 3426 3638 -2508 339 189 23 76 chr18 14460375 14460507 -72217041 - L1M4 LINE L1 -3199 2947 2823 * 3562 242 77 27 chr18 14460655 14463027 -72214521 + L1ME1 LINE L1 3650 6135 -31 1146 286 119 42 chr18 14463313 14463669 -72213879 - L2 LINE L2 -2 3311 2984 2272 102 0 16 chr18 14463669 14463982 -72213566 + AluSq SINE Alu 1 308 -5 1146 286 119 42 chr18 14463982 14464628 -72212920 - L2 LINE L2 -329 2984 2232 1420 193 17 121 chr18 14465393 14465798 -72211750 - MLT1A1 LTR MaLR 0 365 3 357 62 0 0 chr18 14465803 14465851 -72211697 + (CA)n Simple_repeat Simple_repeat 2 49 0 336 273 46 45 chr18 14466740 14466893 -72210655 - MIR3 SINE MIR -22 186 26 201 130 53 47 chr18 14468014 14468183 -72209365 + (CA)n Simple_repeat Simple_repeat 2 171 0 369 92 50 25 chr18 14468229 14468348 -72209200 + (CA)n Simple_repeat Simple_repeat 1 122 0 280 103 39 77 chr18 14468441 14468597 -72208951 + (CACAC)n Simple_repeat Simple_repeat 1 150 0 253 211 0 0 chr18 14468868 14468920 -72208628 + LTR30 LTR ERV1 1 52 -670 2015 143 54 27 chr18 14468920 14469363 -72208185 + LTR12 LTR ERV1 55 468 -246 220 242 117 17 chr18 14473055 14473175 -72204373 - L2 LINE L2 -225 3047 2916 23 0 0 0 chr18 14474073 14474096 -72203452 + AT_rich Low_complexity Low_complexity 1 23 0 186 189 0 0 chr18 14474216 14474253 -72203295 + (TCTA)n Simple_repeat Simple_repeat 2 38 0 2848 16 0 0 chr18 14479628 14479946 -72197602 + AluYb8 SINE Alu 1 318 0 302 294 24 0 chr18 14480039 14480124 -72197424 - L2 LINE L2 -2 3311 3225 659 234 226 11 chr18 14480157 14480422 -72197126 - L2 LINE L2 -338 2976 2655 2016 157 0 6 chr18 14480856 14481168 -72196380 + AluSx SINE Alu 1 310 -2 305 298 28 35 chr18 14482834 14482975 -72194573 + L2 LINE L2 3173 3312 -1 246 348 34 0 chr18 14483111 14483200 -72194348 + MIR SINE MIR 81 172 -90 2189 128 0 0 chr18 14483251 14483548 -72194000 - AluSg SINE Alu -13 297 1 29 21 0 21 chr18 14483548 14483559 -72193989 + AT_rich Low_complexity Low_complexity 1 11 -35 2306 89 3 0 chr18 14483559 14483850 -72193698 - AluY SINE Alu -19 292 1 29 21 0 21 chr18 14483850 14483885 -72193663 + AT_rich Low_complexity Low_complexity 11 46 0 38 22 0 0 chr18 14483922 14483967 -72193581 + AT_rich Low_complexity Low_complexity 1 45 0 1397 148 3 42 chr18 14484087 14484371 -72193177 - PABL_B LTR ERV1 -55 612 340 3930 70 39 28 chr18 14484371 14485408 -72192140 - MER11A LTR ERVK 0 1266 1 1539 113 10 79 chr18 14485436 14485525 -72192023 - PABL_B LTR ERV1 -395 272 178 2282 79 6 44 chr18 14485525 14485840 -72191708 - AluY SINE Alu -8 303 1 1539 113 10 79 chr18 14485840 14486042 -72191506 - PABL_B LTR ERV1 -489 178 1 1224 180 99 31 chr18 14486313 14486635 -72190913 + MER2 DNA MER2_type 1 344 0 352 270 206 21 chr18 14486664 14486853 -72190695 + MIR SINE MIR 8 231 -31 207 367 0 25 chr18 14486975 14487054 -72190494 - MIR SINE MIR -174 88 12 217 253 0 67 chr18 14487557 14487632 -72189916 - L2 LINE L2 -215 3098 3029 207 314 141 70 chr18 14487781 14488583 -72188965 - L2 LINE L2 -413 2901 2043 186 310 35 35 chr18 14490018 14490131 -72187417 - MIR SINE MIR -78 130 18 458 220 39 99 chr18 14490414 14490455 -72187093 - MER58B DNA MER1_type -2079 341 299 2198 94 0 0 chr18 14490455 14490732 -72186816 + AluSx SINE Alu 26 302 -10 458 220 39 99 chr18 14490732 14490750 -72186798 - MER58B DNA MER1_type -2121 299 281 243 0 0 0 chr18 14490750 14490777 -72186771 + (TG)n Simple_repeat Simple_repeat 2 28 0 458 220 39 99 chr18 14490777 14490898 -72186650 - MER58B DNA MER1_type -2139 281 171 299 304 70 32 chr18 14492472 14492629 -72184919 + MIR SINE MIR 6 164 -62 488 297 108 11 chr18 14492684 14492869 -72184679 + MIR SINE MIR 60 262 0 2125 149 30 25 chr18 14493186 14493548 -72184000 + THE1B LTR MaLR 1 364 0 1317 143 49 0 chr18 14494312 14494556 -72182992 + LTR62 LTR ERVK 1 256 -463 364 97 0 16 chr18 14494555 14494617 -72182931 + LTR62 LTR ERVK 369 429 -290 * 1409 241 61 18 chr18 14494769 14495212 -72182336 + LTR40b LTR ERVL 1 462 0 2272 142 0 0 chr18 14495507 14495818 -72181730 - AluSx SINE Alu -1 311 1 1893 156 3 10 chr18 14495921 14496223 -72181325 + AluSq SINE Alu 3 302 -11 1621 31 5 0 chr18 14496234 14496430 -72181118 + L1PA4 LINE L1 5951 6147 -8 260 262 8 24 chr18 14496813 14496939 -72180609 - LTR16A1 LTR ERVL -8 449 326 2398 96 0 0 chr18 14496941 14497242 -72180306 + AluSx SINE Alu 1 301 -11 415 244 30 8 chr18 14497387 14497518 -72180030 - LTR16A1 LTR ERVL -322 135 2 229 324 69 10 chr18 14499523 14499625 -72177923 + L2 LINE L2 3126 3233 -39 2400 162 47 2 chr18 14500412 14500819 -72176729 - MSTA LTR MaLR -3 425 1 249 325 15 86 chr18 14501815 14502012 -72175536 - L2 LINE L2 -56 3216 3034 1192 212 70 28 chr18 14502136 14502495 -72175053 + MLT1A2 LTR MaLR 1 374 0 2150 135 3 0 chr18 14502983 14503295 -72174253 - AluSq SINE Alu 0 313 1 2699 152 22 12 chr18 14503295 14503795 -72173753 - L1PB4 LINE L1 -6 6150 5646 314 275 0 117 chr18 14503796 14503916 -72173632 + L1 LINE L1 862 967 -5882 365 292 30 12 chr18 14506208 14506376 -72171172 - MER104 DNA Tc2 -6 174 4 2315 121 0 6 chr18 14506620 14506934 -72170614 + AluSx SINE Alu 1 312 0 23 54 0 0 chr18 14508793 14508830 -72168718 + AT_rich Low_complexity Low_complexity 1 37 0 26 0 0 0 chr18 14508840 14508866 -72168682 + AT_rich Low_complexity Low_complexity 1 26 0 373 287 31 5 chr18 14509192 14509387 -72168161 + L1 LINE L1 4427 4626 -2222 464 343 62 16 chr18 14509554 14509939 -72167609 + L1 LINE L1 4825 5227 -1621 262 143 0 0 chr18 14509966 14510008 -72167540 + MLT1I LTR MaLR 368 409 0 180 0 0 0 chr18 14510034 14510054 -72167494 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 1907 134 3 7 chr18 14510056 14510340 -72167208 - AluSx SINE Alu -29 283 1 261 0 0 0 chr18 14510576 14510605 -72166943 + (CAAG)n Simple_repeat Simple_repeat 3 31 0 3566 176 58 15 chr18 14510605 14511323 -72166225 - MER21B LTR ERV1 -114 749 1 346 291 39 16 chr18 14511894 14512021 -72165527 + L2 LINE L2 1341 1470 -1844 296 309 29 58 chr18 14512030 14512308 -72165240 - L1M4 LINE L1 -2452 3694 3425 955 201 120 37 chr18 14512341 14512724 -72164824 + LTR56 LTR ERV1 11 425 -20 682 287 52 43 chr18 14512801 14513149 -72164399 - L1M4 LINE L1 -2739 3407 3057 3084 134 44 11 chr18 14513294 14513845 -72163703 + LTR24B LTR ERV1 1 569 -7 493 342 12 8 chr18 14513845 14514085 -72163463 + LTR24B-int LTR ERV1 1 241 -4882 2204 120 0 0 chr18 14514099 14514400 -72163148 + AluSg SINE Alu 2 302 -8 297 240 0 56 chr18 14514448 14514573 -72162975 + LTR24B-int LTR ERV1 422 539 -4584 574 348 22 28 chr18 14516982 14517341 -72160207 + LTR56-int LTR ERV1 150 506 -4141 1217 58 58 42 chr18 14519065 14519256 -72158292 - L1PB1 LINE L1 -2 6149 5956 332 351 41 36 chr18 14519300 14519713 -72157835 + MER110-int LTR ERV1 2142 2556 -2091 5947 141 37 8 chr18 14519826 14521136 -72156412 - L1MA2 LINE L1 0 7723 6379 1608 160 25 9 chr18 14521146 14521465 -72156083 + THE1C LTR MaLR 52 375 0 9059 157 23 8 chr18 14521506 14523349 -72154199 - L1MA2 LINE L1 -1196 6369 4498 560 256 0 0 chr18 14523349 14523478 -72154070 - FRAM SINE Alu -5 171 43 1201 127 5 0 chr18 14523482 14523942 -72153606 - GSATX Satellite centromeric 0 462 1 612 170 0 0 chr18 14523942 14524036 -72153512 - FLAM_C SINE Alu -15 128 35 3973 181 25 21 chr18 14524038 14525569 -72151979 - L1MA2 LINE L1 -3060 4505 2964 2987 207 25 18 chr18 14525565 14526746 -72150802 - L1MA2 LINE L1 -6770 795 23 * 2217 101 0 7 chr18 14527337 14527634 -72149914 + AluSc SINE Alu 1 295 -14 1715 186 0 17 chr18 14527638 14527934 -72149614 - AluJb SINE Alu -10 302 12 1613 204 62 52 chr18 14528508 14528988 -72148560 + MER66A LTR ERV1 100 478 0 1018 245 60 38 chr18 14528988 14529405 -72148143 - MER65B LTR ERV1 -8 523 98 921 219 140 54 chr18 14529560 14530080 -72147468 - MER41B LTR ERV1 -8 490 100 2979 171 80 2 chr18 14530446 14531020 -72146528 - LTR31 LTR ERV1 0 619 1 26 0 0 0 chr18 14532640 14532666 -72144882 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr18 14533833 14533855 -72143693 + AT_rich Low_complexity Low_complexity 1 22 0 914 195 0 0 chr18 14534086 14534245 -72143303 - FRAM SINE Alu -3 163 5 2234 122 3 0 chr18 14534634 14534945 -72142603 + AluSx SINE Alu 1 312 0 420 363 32 32 chr18 14535282 14535530 -72142018 + L1MEd LINE L1 1008 1255 -4864 1232 238 64 49 chr18 14536298 14537067 -72140481 - L1M4 LINE L1 -3561 2821 2031 295 268 195 21 chr18 14537202 14537392 -72140156 + MLT1H LTR MaLR 311 533 -16 2415 120 72 2 chr18 14537742 14538160 -72139388 - MER4C LTR ERV1 -18 447 1 1614 235 26 19 chr18 14538444 14538869 -72138679 + L1MC4 LINE L1 7431 7858 -184 21 0 0 0 chr18 14539056 14539077 -72138471 + AT_rich Low_complexity Low_complexity 1 21 0 2307 98 0 0 chr18 14539765 14540061 -72137487 + AluSq SINE Alu 3 298 -15 1109 163 0 0 chr18 14540467 14540645 -72136903 - AluSg/x SINE Alu 0 312 135 804 79 0 0 chr18 14540648 14540749 -72136799 + AluSg SINE Alu 30 130 -180 221 136 0 23 chr18 14541563 14541607 -72135941 + (CA)n Simple_repeat Simple_repeat 2 44 0 590 288 22 78 chr18 14542166 14542485 -72135063 - L2 LINE L2 -819 2495 2195 2440 108 19 11 chr18 14542541 14542902 -72134646 - THE1B LTR MaLR 0 364 1 2453 84 0 0 chr18 14542946 14543254 -72134294 - AluSx SINE Alu -4 308 1 303 309 111 21 chr18 14543331 14543574 -72133974 - LTR33 LTR ERVL -32 489 225 265 115 148 33 chr18 14544394 14544455 -72133093 + MER3 DNA MER1_type 139 206 -3 400 292 119 6 chr18 14544753 14544921 -72132627 + MIR SINE MIR 5 191 -71 2015 113 55 3 chr18 14546422 14546715 -72130833 - AluSc SINE Alu -1 308 1 359 244 33 0 chr18 14547378 14547468 -72130080 + MLT1D-int LTR MaLR 1279 1371 0 2523 166 55 25 chr18 14547468 14547957 -72129591 + MLT1D LTR MaLR 1 504 -1 2404 62 0 33 chr18 14548994 14549301 -72128247 - AluY SINE Alu -14 297 1 1746 151 14 14 chr18 14550018 14550309 -72127239 - AluJb SINE Alu -21 291 1 21 0 0 0 chr18 14551322 14551343 -72126205 + AT_rich Low_complexity Low_complexity 1 21 0 531 176 0 0 chr18 14551456 14551547 -72126001 - L1MC/D LINE L1 -799 5814 5724 1891 118 0 27 chr18 14551548 14551845 -72125703 - Tigger4(Zombi) DNA MER2_type 0 2731 2443 267 184 0 0 chr18 14551868 14551917 -72125631 - Tigger4(Zombi) DNA MER2_type -2125 606 558 8958 230 43 21 chr18 14551917 14554652 -72122896 - L1MC/D LINE L1 -744 5682 2921 394 164 0 0 chr18 14554669 14554742 -72122806 - L1MC/D LINE L1 -3980 2446 2374 1963 80 104 7 chr18 14554743 14555042 -72122506 - L1PA7 LINE L1 -4 6150 5823 3963 152 202 10 chr18 14555246 14556216 -72121332 - L1MC/D LINE L1 -4210 2216 1061 1333 197 180 0 chr18 14556506 14556800 -72120748 + MER7A DNA MER2_type 1 345 -1 680 298 31 0 chr18 14556857 14557085 -72120463 + HERV16 LTR ERVL 1 235 -4761 961 341 51 29 chr18 14557198 14557790 -72119758 + HERV16 LTR ERVL 364 968 -4028 529 297 93 24 chr18 14557800 14558046 -72119502 + HERV16 LTR ERVL 1928 2127 -2869 30 59 0 0 chr18 14558674 14558725 -72118823 + AT_rich Low_complexity Low_complexity 1 51 0 23 54 0 0 chr18 14559057 14559094 -72118454 + AT_rich Low_complexity Low_complexity 1 37 0 521 268 113 0 chr18 14559457 14559625 -72117923 + L1MEc LINE L1 65 251 -6145 2085 233 118 54 chr18 14559637 14560057 -72117491 + L1MEc LINE L1 444 836 -5379 1189 156 9 5 chr18 14560057 14560281 -72117267 + L1MB3 LINE L1 5955 6179 -4 2085 233 118 54 chr18 14560281 14560785 -72116763 + L1MEc LINE L1 836 1398 -4817 183 304 48 48 chr18 14561465 14561590 -72115958 - MIR SINE MIR -50 212 88 277 249 166 65 chr18 14561676 14561905 -72115643 + L2 LINE L2 3004 3255 -58 2156 105 0 10 chr18 14562108 14562403 -72115145 + AluY SINE Alu 1 292 -19 2269 49 11 3 chr18 14562469 14562752 -72114796 - MER4E LTR ERV1 0 766 482 4537 69 10 16 chr18 14562752 14563792 -72113756 - MER11A LTR ERVK 0 1266 1 2621 58 26 24 chr18 14563792 14564122 -72113426 - MER4E LTR ERV1 -280 486 153 2826 96 112 0 chr18 14564122 14564558 -72112990 + LTR19A LTR ERV1 1 485 -1 2621 58 26 24 chr18 14564558 14564606 -72112942 - MER4E LTR ERV1 -613 153 107 10091 71 15 54 chr18 14564606 14566039 -72111509 + SVA Other Other 10 1386 0 771 213 118 28 chr18 14566039 14566326 -72111222 + L1MCa LINE L1 1275 1587 -4839 2548 166 130 30 chr18 14566337 14566837 -72110711 - MER44D DNA MER2_type 0 605 1 2190 235 97 31 chr18 14566839 14567358 -72110190 + L1MCa LINE L1 1691 2174 -4252 186 43 0 0 chr18 14567358 14567381 -72110167 + (GA)n Simple_repeat Simple_repeat 1 23 0 2190 235 97 31 chr18 14567381 14567985 -72109563 + L1MCa LINE L1 2174 2880 -3546 1584 241 46 35 chr18 14567997 14568716 -72108832 + L1MA9 LINE L1 2975 3704 -3861 746 152 0 16 chr18 14568716 14568841 -72108707 + FLAM_C SINE Alu 1 123 -20 26 0 0 0 chr18 14568841 14568867 -72108681 + AT_rich Low_complexity Low_complexity 1 26 0 2555 239 10 6 chr18 14568868 14569541 -72108007 + L1MA9 LINE L1 3690 4365 -3200 1180 152 5 0 chr18 14569563 14569760 -72107788 + L1PB1 LINE L1 3 200 -6663 * 14936 173 57 26 chr18 14569752 14575437 -72102111 + L1PB1 LINE L1 625 6520 -347 273 57 0 0 chr18 14575437 14575472 -72102076 + (TG)n Simple_repeat Simple_repeat 2 36 0 14936 173 57 26 chr18 14575472 14575832 -72101716 + L1PB1 LINE L1 6520 6867 0 10914 179 32 14 chr18 14575809 14578610 -72098938 + L1MA9 LINE L1 4340 7217 -514 * 285 98 0 0 chr18 14578610 14578651 -72098897 + (CA)n Simple_repeat Simple_repeat 2 42 0 10914 179 32 14 chr18 14578651 14579175 -72098373 + L1MA9 LINE L1 7217 7730 -1 1327 252 79 17 chr18 14579177 14581363 -72096185 + L1ME1 LINE L1 3120 5488 -678 3100 174 59 23 chr18 14581369 14581980 -72095568 - MER39 LTR ERV1 0 707 75 1701 237 15 2 chr18 14582008 14582404 -72095144 + L1ME1 LINE L1 5488 5888 -278 2764 231 36 20 chr18 14582409 14582641 -72094907 + L1ME2 LINE L1 5397 5624 -540 2353 82 0 3 chr18 14582641 14582945 -72094603 - AluY SINE Alu -8 303 1 2764 231 36 20 chr18 14582945 14583167 -72094381 + L1ME2 LINE L1 5624 5841 -323 3886 113 68 52 chr18 14583167 14583847 -72093701 - LTR8 LTR ERV1 0 691 1 2764 231 36 20 chr18 14583847 14584131 -72093417 + L1ME2 LINE L1 5841 6148 -16 2251 108 0 3 chr18 14584398 14584703 -72092845 - AluSq SINE Alu -9 304 1 1544 186 55 10 chr18 14584723 14585013 -72092535 - AluJb SINE Alu -9 303 1 1942 97 7 25 chr18 14585375 14585653 -72091895 - AluSx SINE Alu -11 301 29 32 0 0 0 chr18 14585843 14585875 -72091673 + AT_rich Low_complexity Low_complexity 1 32 0 557 266 57 0 chr18 14585923 14586081 -72091467 + LTR68 LTR ERV1 571 737 -3 256 230 71 0 chr18 14586091 14586204 -72091344 - L1M4 LINE L1 -3129 3017 2897 25 31 0 0 chr18 14586215 14586247 -72091301 + AT_rich Low_complexity Low_complexity 1 32 0 471 289 32 26 chr18 14586298 14586488 -72091060 + MER39 LTR ERV1 517 707 0 230 125 0 163 chr18 14586488 14586568 -72090980 - L1MB3 LINE L1 -11 6172 6106 2683 155 81 60 chr18 14588018 14588376 -72089172 - LTR24B LTR ERV1 -2 633 284 1853 107 46 32 chr18 14588376 14588657 -72088891 + AluSx SINE Alu 1 285 -27 553 121 132 0 chr18 14588566 14588657 -72088891 + AluSc SINE Alu 180 304 0 199 0 0 0 chr18 14588657 14588679 -72088869 + (CAAA)n Simple_repeat Simple_repeat 2 176 0 2683 155 81 60 chr18 14588679 14588903 -72088645 - LTR24B LTR ERV1 -350 285 1 343 150 0 0 chr18 14589070 14589130 -72088418 - L1MB4 LINE L1 -1 6179 6120 2603 184 30 0 chr18 14589130 14589663 -72087885 + MER34C LTR ERV1 37 585 0 1387 146 8 19 chr18 14589663 14589924 -72087624 - L1MB3 LINE L1 -59 6124 5867 467 311 61 0 chr18 14589924 14590104 -72087444 + MER34 LTR ERV1 1 191 -351 1598 144 51 31 chr18 14590109 14590462 -72087086 - THE1C LTR MaLR 0 375 16 679 197 49 7 chr18 14590553 14590733 -72086815 - L1MB3 LINE L1 -315 5868 5683 2454 54 0 3 chr18 14590794 14591091 -72086457 - AluY SINE Alu -15 296 1 29 94 0 0 chr18 14591228 14591313 -72086235 + AT_rich Low_complexity Low_complexity 1 85 0 2343 239 58 42 chr18 14591333 14592296 -72085252 - L1MC4 LINE L1 -63 7979 7001 335 319 52 9 chr18 14592296 14592412 -72085136 - L1M4 LINE L1 -2367 3779 3659 21 0 0 0 chr18 14592631 14592652 -72084896 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 14592738 14592766 -72084782 + AT_rich Low_complexity Low_complexity 1 28 0 410 308 19 42 chr18 14592908 14593168 -72084380 - L1M4 LINE L1 -3139 3007 2754 2405 147 61 16 chr18 14593697 14594139 -72083409 + LTR24 LTR ERV1 6 467 0 1669 168 69 52 chr18 14594217 14594621 -72082927 - MSTC LTR MaLR -17 411 1 211 179 51 0 chr18 14594802 14594841 -72082707 - L2 LINE L2 -16 3256 3216 507 167 10 0 chr18 14594972 14595068 -72082480 + FLAM_A SINE Alu 45 141 -1 404 331 47 17 chr18 14595151 14595323 -72082225 - MER5A DNA MER1_type -6 183 7 2181 137 3 0 chr18 14595570 14595876 -72081672 + AluSx SINE Alu 4 310 -2 23 0 0 0 chr18 14596043 14596066 -72081482 + AT_rich Low_complexity Low_complexity 1 23 0 240 324 141 27 chr18 14596381 14596566 -72080982 + MIR SINE MIR 2 207 -55 1580 151 46 3 chr18 14599117 14599402 -72078146 - AluJo SINE Alu -15 297 1 832 189 0 0 chr18 14601973 14602132 -72075416 - THE1C-int LTR MaLR -848 803 645 454 161 0 11 chr18 14602130 14602217 -72075331 - THE1C-int LTR MaLR -1565 86 1 * 1952 117 57 41 chr18 14602217 14602586 -72074962 - THE1C LTR MaLR 0 375 1 243 313 87 9 chr18 14602965 14603080 -72074468 - L2 LINE L2 -6 3307 3184 181 333 0 0 chr18 14603108 14603159 -72074389 + L2 LINE L2 3145 3195 -77 2447 77 0 7 chr18 14604969 14605279 -72072269 + AluY SINE Alu 1 308 -3 300 48 0 0 chr18 14605291 14605333 -72072215 + AluY SINE Alu 1 42 -261 206 61 0 30 chr18 14605333 14605366 -72072182 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 1392 304 56 16 chr18 14605421 14606118 -72071430 + L1MEc LINE L1 450 1174 -5222 314 344 65 7 chr18 14606120 14606274 -72071274 + L1MEc LINE L1 1173 1335 -4880 1286 236 90 26 chr18 14606289 14606743 -72070805 + L1ME LINE L1 5122 5545 -621 2107 123 7 3 chr18 14606743 14607044 -72070504 + AluSq SINE Alu 1 302 -11 1286 236 90 26 chr18 14607044 14607183 -72070365 + L1ME LINE L1 5545 5674 -492 1274 199 99 22 chr18 14607183 14607545 -72070003 + MLT1B LTR MaLR 1 390 0 1286 236 90 26 chr18 14607545 14607613 -72069935 + L1ME LINE L1 5674 5812 -354 416 302 71 54 chr18 14607693 14607988 -72069560 - L1ME1 LINE L1 -52 6114 5815 394 272 60 33 chr18 14608736 14608920 -72068628 - MIR3 SINE MIR -4 204 16 202 303 0 61 chr18 14609594 14609693 -72067855 - MIR SINE MIR -62 200 108 411 300 36 21 chr18 14611181 14611321 -72066227 + MIR SINE MIR 2 143 -119 610 273 28 94 chr18 14612705 14613139 -72064409 - MLT1J LTR MaLR -18 493 52 1116 256 28 13 chr18 14613217 14613615 -72063933 + L1ME3A LINE L1 4659 5062 -1084 1609 259 123 13 chr18 14613674 14614449 -72063099 + L1PBa LINE L1 13 872 -5991 2057 160 32 3 chr18 14616454 14616830 -72060718 + L1PA16 LINE L1 5780 6166 0 22 35 0 0 chr18 14617003 14617032 -72060516 + AT_rich Low_complexity Low_complexity 1 29 0 23 68 0 0 chr18 14617112 14617156 -72060392 + AT_rich Low_complexity Low_complexity 1 44 0 378 298 41 40 chr18 14617561 14617743 -72059805 + L1ME3A LINE L1 5763 5939 -227 35 54 0 0 chr18 14618367 14618423 -72059125 + AT_rich Low_complexity Low_complexity 1 56 0 785 188 0 0 chr18 14618694 14618827 -72058721 + FLAM_C SINE Alu 1 133 0 34 0 0 0 chr18 14618827 14618861 -72058687 + AT_rich Low_complexity Low_complexity 1 34 0 1294 191 6 98 chr18 14618865 14619190 -72058358 + AluJo SINE Alu 1 295 -17 1003 162 13 0 chr18 14619582 14619736 -72057812 - AluJb SINE Alu -20 292 137 1847 226 29 7 chr18 14619882 14620290 -72057258 + MER54A LTR ERVL 484 900 -1 23 54 0 0 chr18 14621878 14621915 -72055633 + AT_rich Low_complexity Low_complexity 1 37 0 664 282 48 61 chr18 14621957 14622397 -72055151 + ERVL LTR ERVL 2451 2884 -2880 507 288 24 12 chr18 14622638 14622808 -72054740 + ERVL LTR ERVL 3168 3339 -2146 949 263 86 68 chr18 14622856 14623730 -72053818 + L1ME LINE L1 237 1166 -5049 2165 161 75 0 chr18 14623730 14624128 -72053420 + MSTC LTR MaLR 1 428 0 949 263 86 68 chr18 14624128 14624718 -72052830 + L1ME LINE L1 1166 1744 -4471 431 287 161 8 chr18 14624815 14625076 -72052472 + L1ME LINE L1 1960 2260 -4136 535 312 75 0 chr18 14625106 14625494 -72052054 + L1ME LINE L1 2205 2621 -3594 272 218 0 0 chr18 14625494 14625549 -72051999 - MER58 DNA MER1_type -1 2419 2365 799 271 74 17 chr18 14625629 14626050 -72051498 + L1ME LINE L1 2630 3074 -3141 206 236 36 0 chr18 14626184 14626239 -72051309 + L2 LINE L2 3216 3272 0 26 0 0 0 chr18 14626446 14626472 -72051076 + AT_rich Low_complexity Low_complexity 1 26 0 2402 118 0 0 chr18 14626726 14627039 -72050509 - AluSq SINE Alu 0 313 1 298 309 121 34 chr18 14627391 14627540 -72050008 + L2 LINE L2 2923 3084 -188 2282 98 0 0 chr18 14627583 14627878 -72049670 - AluSc SINE Alu -14 295 1 950 208 194 59 chr18 14630204 14630541 -72047007 - MLT1D LTR MaLR -2 503 90 2121 82 11 0 chr18 14630541 14630810 -72046738 + AluSg1 SINE Alu 21 292 -17 950 208 194 59 chr18 14630810 14630915 -72046633 - MLT1D LTR MaLR -415 90 1 1375 185 54 67 chr18 14630973 14631346 -72046202 - MLT1A2 LTR MaLR -6 368 1 373 246 8 8 chr18 14634286 14634416 -72043132 + CT-rich Low_complexity Low_complexity 2 131 0 245 269 51 39 chr18 14634541 14634619 -72042929 + MIR SINE MIR 154 232 -30 1292 245 68 25 chr18 14634768 14635253 -72042295 - MER73 LTR ERVL -24 620 115 183 284 34 57 chr18 14636047 14636135 -72041413 - L3 LINE CR1 -7 1570 1485 228 296 14 0 chr18 14636632 14636703 -72040845 + L2 LINE L2 3242 3313 0 633 274 79 70 chr18 14637183 14637599 -72039949 - LTR16C LTR ERVL -8 483 64 1917 130 30 0 chr18 14639015 14639284 -72038264 + AluSx SINE Alu 1 277 -35 186 43 0 0 chr18 14639284 14639307 -72038241 + (TAAAA)n Simple_repeat Simple_repeat 5 27 0 24 0 0 0 chr18 14639764 14639788 -72037760 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr18 14639939 14639965 -72037583 + AT_rich Low_complexity Low_complexity 1 26 0 14533 128 31 11 chr18 14640650 14640768 -72036780 - Tigger1 DNA MER2_type 0 2418 2304 1739 38 85 4 chr18 14640768 14641003 -72036545 + L1PA5 LINE L1 5901 6154 0 14533 128 31 11 chr18 14641003 14641967 -72035581 - Tigger1 DNA MER2_type -114 2304 1361 3234 92 20 4 chr18 14641967 14642426 -72035122 - L1PA10 LINE L1 -7 6161 5696 14533 128 31 11 chr18 14642426 14643691 -72033857 - Tigger1 DNA MER2_type -1057 1361 23 307 278 78 0 chr18 14644410 14644500 -72033048 - MIR3 SINE MIR -15 193 97 189 107 0 0 chr18 14644940 14644968 -72032580 + (CA)n Simple_repeat Simple_repeat 2 29 0 3392 249 100 59 chr18 14645567 14647303 -72030245 - L1ME1 LINE L1 -48 6118 4225 2232 84 0 19 chr18 14647303 14647613 -72029935 + AluY SINE Alu 1 304 -7 3392 249 100 59 chr18 14647613 14648599 -72028949 - L1ME1 LINE L1 -1941 4225 3281 529 191 111 30 chr18 14648604 14648803 -72028745 - L1ME1 LINE L1 -3037 3109 2895 980 136 0 0 chr18 14648804 14648944 -72028604 - AluYb8 SINE Alu -178 140 1 1120 256 101 12 chr18 14648945 14649449 -72028099 - L1ME1 LINE L1 -3413 2733 2185 5440 222 40 74 chr18 14649949 14651441 -72026107 + L1 LINE L1 1 1441 -5408 1616 133 8 0 chr18 14651438 14651702 -72025846 - L1P4 LINE L1 -581 5582 5317 * 845 163 84 9 chr18 14651703 14651918 -72025630 + L1 LINE L1 1812 2042 -4807 * 1788 172 15 3 chr18 14651914 14652251 -72025297 + L1PA15-16 LINE L1 2499 2839 -4010 2718 185 55 48 chr18 14652252 14653416 -72024132 - LTR12 LTR ERV1 -133 1523 5 9835 237 24 23 chr18 14653416 14656276 -72021272 + L1 LINE L1 2835 5695 -1153 * 13884 189 29 11 chr18 14656273 14659946 -72017602 + L1MA4A LINE L1 2742 6490 -515 1718 150 17 22 chr18 14659946 14660293 -72017255 - MER4A LTR ERV1 0 664 261 731 70 0 20 chr18 14660293 14660393 -72017155 - MER4A LTR ERV1 -566 98 1 3101 124 16 12 chr18 14660393 14660907 -72016641 + L1MA4A LINE L1 6485 7000 -5 889 200 50 34 chr18 14661688 14662127 -72015421 - MLT1F1 LTR MaLR 0 567 7 266 272 87 33 chr18 14662548 14662732 -72014816 - MER21-int LTR ERV1 -1942 2249 2056 * 276 331 8 0 chr18 14662655 14662776 -72014772 - MERVL LTR ERVL -2078 3407 3286 281 228 0 0 chr18 14662919 14662976 -72014572 - L1MEc LINE L1 -4320 2243 2187 386 89 0 0 chr18 14663208 14663264 -72014284 - AluSc SINE Alu -6 293 238 886 305 60 13 chr18 14663285 14663822 -72013726 - L1MEc LINE L1 -4703 1681 1120 273 300 125 3 chr18 14664137 14664440 -72013108 - L1MEc LINE L1 -4657 1653 1314 26 30 0 0 chr18 14664566 14664599 -72012949 + AT_rich Low_complexity Low_complexity 1 33 0 3686 61 0 2 chr18 14664603 14665075 -72012473 - L1PA5 LINE L1 0 6154 5684 284 307 126 24 chr18 14665083 14665575 -72011973 - L1MEc LINE L1 -5005 1114 573 326 240 19 39 chr18 14665587 14665741 -72011807 - L1ME LINE L1 -2989 3091 2941 1855 119 0 0 chr18 14665742 14666020 -72011528 - L1P LINE L1 -3251 2895 2618 1570 241 67 87 chr18 14666024 14666141 -72011407 - L1ME LINE L1 -3141 2939 2821 2134 104 0 0 chr18 14666141 14666420 -72011128 - AluSc SINE Alu -30 279 1 1570 241 67 87 chr18 14666420 14667130 -72010418 - L1ME LINE L1 -3259 2821 2183 2798 13 0 0 chr18 14667130 14667435 -72010113 - AluYa5 SINE Alu -5 306 2 1570 241 67 87 chr18 14667435 14667930 -72009618 - L1ME LINE L1 -3897 2183 1680 3778 174 30 3 chr18 14667942 14668576 -72008972 + L1PA15-16 LINE L1 6 656 -6193 * 9074 220 36 7 chr18 14668572 14670846 -72006702 + L1 LINE L1 2994 5332 -814 752 136 0 0 chr18 14670846 14670980 -72006568 + AluSc SINE Alu 174 307 0 5414 116 16 1 chr18 14670983 14671801 -72005747 + L1PA16 LINE L1 5327 6156 -10 616 171 24 0 chr18 14671814 14671937 -72005611 - L1MB8 LINE L1 -6 6172 6047 613 257 127 73 chr18 14671955 14673017 -72004531 - L1ME LINE L1 -4443 1637 544 612 315 30 68 chr18 14673303 14673732 -72003816 - L1ME LINE L1 -5645 425 13 765 286 69 43 chr18 14673774 14674078 -72003470 - L1MEd LINE L1 -5571 548 237 586 340 201 7 chr18 14674123 14674690 -72002858 + L2 LINE L2 2234 2910 -404 1320 247 12 12 chr18 14675049 14675373 -72002175 - MER58B DNA MER1_type -3 338 15 242 314 196 24 chr18 14676049 14676304 -72001244 - L2 LINE L2 -17 3296 2998 3168 49 10 0 chr18 14676520 14676925 -72000623 + L1PA4 LINE L1 5743 6151 -4 21 71 0 0 chr18 14677345 14677387 -72000161 + AT_rich Low_complexity Low_complexity 1 42 0 295 310 26 26 chr18 14678040 14678153 -71999395 + MIR SINE MIR 18 130 -78 391 35 12 176 chr18 14678212 14678297 -71999251 - MADE1 DNA Mariner -4 76 6 2016 140 0 26 chr18 14678412 14678719 -71998829 - AluJo SINE Alu -13 299 1 1720 152 26 10 chr18 14678803 14679105 -71998443 + MER44D DNA MER2_type 33 609 0 22 0 0 0 chr18 14679182 14679204 -71998344 + AT_rich Low_complexity Low_complexity 1 22 0 27 49 0 0 chr18 14680554 14680595 -71996953 + AT_rich Low_complexity Low_complexity 1 41 0 3038 247 33 4 chr18 14680598 14682124 -71995424 - L1MD1 LINE L1 0 6636 5013 249 247 27 68 chr18 14682113 14682259 -71995289 + L1M4 LINE L1 2393 2532 -3614 * 301 206 123 0 chr18 14682296 14682369 -71995179 - L1MD1 LINE L1 -1552 4988 4907 * 7410 189 106 102 chr18 14682368 14682637 -71994911 - L1MD1 LINE L1 -3901 2639 2372 522 0 0 0 chr18 14682637 14682695 -71994853 + (TA)n Simple_repeat Simple_repeat 2 59 0 7410 189 106 102 chr18 14682695 14682938 -71994610 - L1MD1 LINE L1 -4168 2372 2131 1713 169 110 13 chr18 14682938 14683328 -71994220 + MSTA LTR MaLR 1 428 0 7410 189 106 102 chr18 14683328 14683760 -71993788 - L1MD1 LINE L1 -4409 2131 1702 1084 173 0 0 chr18 14683760 14683922 -71993626 + FRAM SINE Alu 1 158 -18 7410 189 106 102 chr18 14683922 14684029 -71993519 - L1MD1 LINE L1 -4838 1702 1597 1580 186 0 47 chr18 14684029 14684347 -71993201 + AluJo SINE Alu 1 303 -9 7410 189 106 102 chr18 14684347 14685743 -71991805 - L1MD1 LINE L1 -4943 1597 19 200 146 0 83 chr18 14686195 14686243 -71991305 + (GGAA)n Simple_repeat Simple_repeat 1 44 0 424 250 36 7 chr18 14688645 14688785 -71988763 - L1ME1 LINE L1 -5 6161 6018 1525 213 18 21 chr18 14688786 14689167 -71988381 + L1MD3 LINE L1 7553 7932 -63 743 240 66 99 chr18 14689169 14689594 -71987954 - MLT1E LTR MaLR -62 531 121 1867 146 42 3 chr18 14689649 14689771 -71987777 + AluJo SINE Alu 1 117 -195 222 37 0 0 chr18 14689771 14689798 -71987750 + (TAA)n Simple_repeat Simple_repeat 2 28 0 1867 146 42 3 chr18 14689798 14689963 -71987585 + AluJo SINE Alu 117 299 -13 221 308 26 26 chr18 14690135 14690213 -71987335 - MIR SINE MIR -86 122 45 2007 162 131 13 chr18 14690457 14690840 -71986708 - MSTA LTR MaLR 0 428 1 206 61 0 30 chr18 14691181 14691214 -71986334 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 185 250 0 0 chr18 14691911 14691947 -71985601 - MIR3 SINE MIR -15 193 158 2524 58 0 0 chr18 14692059 14692354 -71985194 - AluY SINE Alu -16 295 1 43 85 0 0 chr18 14693550 14693656 -71983892 + AT_rich Low_complexity Low_complexity 1 106 0 235 180 20 0 chr18 14693659 14693709 -71983839 + Charlie1a DNA MER1_type 79 129 -1326 32351 110 11 55 chr18 14693727 14695669 -71981879 - L1PA7 LINE L1 0 6154 4127 1467 115 19 0 chr18 14695669 14695850 -71981698 - AluY SINE Alu -1 310 123 315 0 0 0 chr18 14695850 14695885 -71981663 + (TG)n Simple_repeat Simple_repeat 2 36 0 1467 115 19 0 chr18 14695885 14695912 -71981636 - AluY SINE Alu -188 123 98 32351 110 11 55 chr18 14695912 14700443 -71977105 - L1PA7 LINE L1 -2027 4127 9 4895 186 71 79 chr18 14700451 14701805 -71975743 + Charlie1a DNA MER1_type 113 1455 0 372 275 50 31 chr18 14704762 14704922 -71972626 + MIR SINE MIR 87 249 -13 346 199 33 73 chr18 14705127 14705178 -71972370 + MER103 DNA DNA 3 54 -112 2522 54 0 6 chr18 14705178 14705491 -71972057 + AluY SINE Alu 1 311 0 346 199 33 73 chr18 14705491 14705590 -71971958 + MER103 DNA DNA 54 147 -19 414 277 0 51 chr18 14706582 14706719 -71970829 - L2 LINE L2 -12 3301 3172 240 35 0 0 chr18 14706910 14706939 -71970609 + (TG)n Simple_repeat Simple_repeat 1 29 0 1911 237 85 106 chr18 14707704 14708307 -71969241 + MLT1G LTR MaLR 6 590 0 737 130 43 0 chr18 14709651 14709766 -71967782 - AluSg/x SINE Alu -18 294 175 461 180 5 3 chr18 14709768 14709850 -71967698 - AluJ/FLAM SINE Alu -233 69 5 714 272 25 16 chr18 14710092 14710335 -71967213 - LTR16A1 LTR ERVL 0 457 213 183 42 0 0 chr18 14710337 14710361 -71967187 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 190 364 148 11 chr18 14711592 14711680 -71965868 - MIR SINE MIR -93 115 16 792 311 86 22 chr18 14711846 14712251 -71965297 - L3 LINE CR1 -3 1574 1144 508 264 42 100 chr18 14713025 14713355 -71964193 + LTR16A LTR ERVL 139 449 -1 297 0 0 0 chr18 14713355 14713388 -71964160 + (TG)n Simple_repeat Simple_repeat 1 33 0 488 30 0 15 chr18 14713388 14713455 -71964093 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 606 208 64 8 chr18 14713503 14713628 -71963920 + MER2 DNA MER2_type 2 133 -212 1290 158 15 0 chr18 14713905 14714107 -71963441 + MER2 DNA MER2_type 139 343 -2 374 328 109 0 chr18 14714498 14714681 -71962867 + MIR3 SINE MIR 4 206 -2 219 316 0 13 chr18 14714842 14714921 -71962627 + L2 LINE L2 3195 3272 0 224 261 228 0 chr18 14715507 14715599 -71961949 + MIR SINE MIR 124 236 -26 335 344 70 0 chr18 14716218 14716375 -71961173 + HERVL LTR ERVL 5159 5326 -328 252 218 11 46 chr18 14717562 14717649 -71959899 - MIR SINE MIR -33 229 146 218 119 24 0 chr18 14718630 14718672 -71958876 + A-rich Low_complexity Low_complexity 3 45 0 2230 118 80 9 chr18 14718704 14719042 -71958506 + THE1B LTR MaLR 1 362 -2 1077 298 116 65 chr18 14719469 14720783 -71956765 + L2 LINE L2 1873 3256 -16 22 35 0 0 chr18 14721405 14721434 -71956114 + AT_rich Low_complexity Low_complexity 1 29 0 237 241 36 109 chr18 14721976 14722113 -71955435 - MIR SINE MIR -113 149 23 * 618 355 31 0 chr18 14722077 14722305 -71955243 + MIR SINE MIR 10 244 -18 431 282 1 32 chr18 14722297 14722442 -71955106 - MER5A DNA MER1_type -5 184 33 * 24 0 0 0 chr18 14724059 14724083 -71953465 + AT_rich Low_complexity Low_complexity 1 24 0 203 161 18 36 chr18 14724130 14724186 -71953362 + (CATATA)n Simple_repeat Simple_repeat 3 57 0 962 141 120 33 chr18 14724643 14724827 -71952721 + L1PB4 LINE L1 5945 6144 -12 1865 160 7 0 chr18 14725876 14726169 -71951379 - AluJo SINE Alu -16 296 2 2541 61 0 0 chr18 14728043 14728339 -71949209 - AluY SINE Alu -15 296 1 5126 225 76 40 chr18 14728345 14730299 -71947249 + L1ME1 LINE L1 3550 5616 -550 1818 147 6 39 chr18 14730299 14730611 -71946937 + AluJb SINE Alu 1 302 -10 5126 225 76 40 chr18 14730611 14731174 -71946374 + L1ME1 LINE L1 5616 6157 -9 568 256 40 68 chr18 14731184 14731434 -71946114 + L2 LINE L2 3027 3269 -44 2487 43 0 0 chr18 14731500 14731817 -71945731 - AluY SINE Alu 0 317 1 312 299 103 0 chr18 14731901 14731998 -71945550 + MIR3 SINE MIR 67 173 -35 271 147 15 15 chr18 14736551 14736592 -71940956 + GA-rich Low_complexity Low_complexity 1 44 -24 2070 128 3 6 chr18 14736592 14736904 -71940644 + AluSx SINE Alu 1 311 -1 271 147 15 15 chr18 14736904 14736930 -71940618 + GA-rich Low_complexity Low_complexity 43 68 0 671 273 71 6 chr18 14738361 14738544 -71939004 + MER58A DNA MER1_type 27 221 -3 24 0 0 0 chr18 14740500 14740524 -71937024 + AT_rich Low_complexity Low_complexity 1 24 0 28 0 0 0 chr18 14740539 14740567 -71936981 + AT_rich Low_complexity Low_complexity 1 28 0 1914 142 7 3 chr18 14740573 14740861 -71936687 - AluSc SINE Alu -20 289 1 313 283 83 8 chr18 14744724 14744844 -71932704 + L2 LINE L2 3140 3268 -4 195 284 37 12 chr18 14745189 14745270 -71932278 - MIR SINE MIR -117 145 63 1622 172 39 18 chr18 14745919 14746204 -71931344 + AluJo SINE Alu 1 291 -21 23 0 0 0 chr18 14746918 14746941 -71930607 + AT_rich Low_complexity Low_complexity 1 23 0 1593 164 98 4 chr18 14747011 14747286 -71930262 - AluJo SINE Alu -11 301 1 1013 161 6 0 chr18 14747652 14747820 -71929728 + FRAM SINE Alu 1 169 -7 320 274 165 59 chr18 14748007 14748346 -71929202 + LTR16A LTR ERVL 76 450 0 443 320 93 27 chr18 14748785 14749085 -71928463 + ERVL LTR ERVL 490 809 -4187 940 271 53 5 chr18 14749115 14749565 -71927983 + MLT1H1 LTR MaLR 4 517 -38 322 313 47 20 chr18 14749597 14749747 -71927801 + ERVL LTR ERVL 873 1026 -3970 348 338 51 25 chr18 14749961 14750198 -71927350 + ERVL LTR ERVL 4311 4553 -1211 274 343 154 13 chr18 14750614 14750714 -71926834 + L2 LINE L2 3048 3132 -181 312 27 0 0 chr18 14750714 14750751 -71926797 + (TC)n Simple_repeat Simple_repeat 2 38 0 274 343 154 13 chr18 14750751 14750883 -71926665 + L2 LINE L2 3132 3313 0 246 215 51 25 chr18 14751168 14751247 -71926301 + MIR SINE MIR 72 152 -110 4094 128 47 10 chr18 14752400 14753081 -71924467 - Tigger3(Golem) DNA MER2_type 0 3029 2324 1015 181 6 6 chr18 14753167 14753344 -71924204 - Tigger3(Golem) DNA MER2_type -2799 230 54 552 138 84 48 chr18 14753344 14753511 -71924037 + L1M1 LINE L1 3366 3538 -4027 525 259 110 47 chr18 14753548 14754249 -71923299 + HSREP522 Satellite telomeric 1 745 -1 1812 122 0 8 chr18 14755545 14755799 -71921749 - AluSx SINE Alu -15 297 46 210 37 0 0 chr18 14755843 14755870 -71921678 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 220 229 36 24 chr18 14755948 14756031 -71921517 + CT-rich Low_complexity Low_complexity 1 84 0 931 70 0 0 chr18 14756907 14757022 -71920526 - MER11C LTR ERVK 0 1071 957 8638 54 24 2 chr18 14757030 14758078 -71919470 - MER11C LTR ERVK 0 1071 1 1508 155 25 22 chr18 14758407 14758685 -71918863 + HUERS-P1 LTR ERV1 2076 2354 -3592 717 166 30 24 chr18 14758684 14758853 -71918695 + HUERS-P1 LTR ERV1 1839 2008 -6112 * 7358 187 94 80 chr18 14758842 14759327 -71918221 + HUERS-P1 LTR ERV1 2715 3192 -3136 306 73 0 0 chr18 14759327 14759368 -71918180 + (CA)n Simple_repeat Simple_repeat 2 42 0 7358 187 94 80 chr18 14759368 14760489 -71917059 + HUERS-P1 LTR ERV1 3192 4296 -2032 1972 155 0 0 chr18 14760489 14760773 -71916775 + AluSx SINE Alu 5 288 -24 7358 187 94 80 chr18 14760773 14761465 -71916083 + HUERS-P1 LTR ERV1 4296 4977 -1351 2236 91 0 17 chr18 14761465 14761763 -71915785 + AluSg SINE Alu 1 293 -17 7358 187 94 80 chr18 14761763 14762118 -71915430 + HUERS-P1 LTR ERV1 4977 5804 -524 751 181 29 7 chr18 14762178 14762316 -71915232 + HUERS-P1 LTR ERV1 6083 6223 -108 292 247 118 0 chr18 14762418 14762503 -71915045 + HUERS-P1 LTR ERV1 5954 6048 -215 383 288 88 6 chr18 14762832 14763002 -71914546 - MIR SINE MIR -31 231 48 2469 77 0 0 chr18 14763080 14763391 -71914157 + AluY SINE Alu 1 311 0 306 264 0 47 chr18 14763494 14763509 -71914039 + HsTC2 DNA Tc2 1798 1812 -86 1627 117 5 5 chr18 14763509 14763731 -71913817 - AluSx SINE Alu -90 222 1 306 264 0 47 chr18 14763731 14763821 -71913727 + HsTC2 DNA Tc2 1812 1898 0 28 0 0 0 chr18 14764393 14764421 -71913127 + AT_rich Low_complexity Low_complexity 1 28 0 715 179 86 130 chr18 14765140 14765509 -71912039 - LTR61 LTR ERV1 -4 591 101 34090 241 26 20 chr18 14765611 14773295 -71904253 - HERV3 LTR ERV1 0 8426 702 729 219 12 19 chr18 14773774 14773934 -71903614 - MER58A DNA MER1_type -26 198 40 258 217 96 12 chr18 14774085 14774168 -71903380 + MER103 DNA DNA 26 115 -51 6241 139 22 57 chr18 14775277 14776412 -71901136 - Tigger7 DNA MER2_type -1 2486 1392 6148 150 69 16 chr18 14776412 14777581 -71899967 - Tigger3b DNA MER2_type 0 1231 1 290 235 41 10 chr18 14777582 14777680 -71899868 + MIR SINE MIR 107 207 -55 342 0 0 0 chr18 14778024 14778062 -71899486 + (CA)n Simple_repeat Simple_repeat 1 38 0 2334 74 10 10 chr18 14778274 14778583 -71898965 - AluY SINE Alu -2 309 1 830 267 87 38 chr18 14778627 14779155 -71898393 - MLT1G1 LTR MaLR 0 555 1 227 237 0 79 chr18 14779234 14779310 -71898238 - L2 LINE L2 0 3272 3203 640 265 63 13 chr18 14779413 14779651 -71897897 + MIR SINE MIR 13 262 0 514 286 13 39 chr18 14780467 14780614 -71896934 - MIR SINE MIR -21 241 102 2378 49 42 0 chr18 14780614 14780898 -71896650 + AluY SINE Alu 1 296 -15 514 286 13 39 chr18 14780898 14780976 -71896572 - MIR SINE MIR -160 102 23 2647 142 34 0 chr18 14781254 14781662 -71895886 - MSTB LTR MaLR -4 422 1 207 0 0 0 chr18 14782022 14782045 -71895503 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 225 341 119 0 chr18 14782198 14782324 -71895224 - MIR3 SINE MIR -3 205 65 213 286 0 14 chr18 14782774 14782844 -71894704 - MIR3 SINE MIR 0 208 140 203 331 134 0 chr18 14783381 14783523 -71894025 + MIR3 SINE MIR 42 202 -6 1303 236 103 21 chr18 14784692 14785159 -71892389 + MLT1D LTR MaLR 1 505 0 195 129 0 0 chr18 14786561 14786592 -71890956 + (CA)n Simple_repeat Simple_repeat 2 32 0 1381 157 172 35 chr18 14787087 14787430 -71890118 + MLT1B LTR MaLR 1 390 0 191 114 29 0 chr18 14788510 14788545 -71889003 + GA-rich Low_complexity Low_complexity 4 39 0 969 127 0 8 chr18 14788691 14788825 -71888723 + AluJb SINE Alu 158 290 -22 794 123 19 7 chr18 14788825 14788979 -71888569 + GA-rich Low_complexity Low_complexity 2 157 0 754 117 0 29 chr18 14788988 14789125 -71888423 + L1MA2 LINE L1 6172 6304 0 405 0 0 0 chr18 14790151 14790196 -71887352 + (TAAAAA)n Simple_repeat Simple_repeat 1 45 0 2528 72 0 0 chr18 14790456 14790760 -71886788 + AluY SINE Alu 1 304 -7 971 156 0 24 chr18 14792003 14792170 -71885378 - FRAM SINE Alu -14 162 1 2269 105 7 3 chr18 14792404 14792710 -71884838 + AluSx SINE Alu 1 307 -5 305 240 50 58 chr18 14792781 14792902 -71884646 + MIR SINE MIR 23 142 -66 716 188 54 16 chr18 14793463 14793649 -71883899 + Charlie5 DNA MER1_type 2393 2585 -27 189 0 0 0 chr18 14794103 14794124 -71883424 + (A)n Simple_repeat Simple_repeat 1 21 0 305 240 50 58 chr18 14794194 14794315 -71883233 + MIR SINE MIR 23 142 -66 716 188 54 16 chr18 14794877 14795063 -71882485 + Charlie5 DNA MER1_type 2432 2624 0 234 0 0 0 chr18 14796386 14796412 -71881136 + (TAA)n Simple_repeat Simple_repeat 2 27 0 543 313 116 24 chr18 14796434 14797029 -71880519 + L1M4 LINE L1 3548 4197 -1949 587 230 14 4 chr18 14797036 14797262 -71880286 + GA-rich Low_complexity Low_complexity 1 228 0 226 291 60 52 chr18 14797351 14797719 -71879829 + L1M4 LINE L1 4298 4668 -1478 363 315 62 11 chr18 14798112 14798330 -71879218 + L1ME LINE L1 3473 3698 -2448 276 303 84 50 chr18 14798338 14798599 -71878949 + L1ME LINE L1 5265 5534 -587 2216 272 89 20 chr18 14798700 14799659 -71877889 + L1M4 LINE L1 3095 4119 -2027 384 295 108 6 chr18 14800977 14801143 -71876405 - MIR SINE MIR -60 202 20 388 260 20 0 chr18 14801543 14801643 -71875905 + MER5A DNA MER1_type 1 102 -87 262 254 14 14 chr18 14802934 14803005 -71874543 + MER110-int LTR ERV1 1225 1295 -5506 2183 152 75 0 chr18 14803668 14804043 -71873505 - MER57A LTR ERV1 0 403 1 911 148 0 28 chr18 14804054 14804196 -71873352 + AluJo SINE Alu 2 139 -173 210 153 34 17 chr18 14804443 14804502 -71873046 + (TA)n Simple_repeat Simple_repeat 1 60 0 251 344 84 46 chr18 14804678 14805001 -71872547 + MER110-int LTR ERV1 166 500 -4147 396 301 28 49 chr18 14805023 14805253 -71872295 + MER110-int LTR ERV1 825 3183 -3612 362 336 0 10 chr18 14806471 14806575 -71870973 + MER110-int LTR ERV1 2277 2379 -2268 693 137 7 41 chr18 14806606 14806752 -71870796 - AluSg/x SINE Alu -30 279 139 279 145 43 0 chr18 14806878 14806947 -71870601 + C-rich Low_complexity Low_complexity 3 74 0 1373 170 0 17 chr18 14807196 14807437 -71870111 + AluJb SINE Alu 15 251 -61 1888 99 6 84 chr18 14807509 14807831 -71869717 - AluSc SINE Alu -12 297 1 455 222 138 83 chr18 14807832 14807917 -71869631 - L1ME2 LINE L1 -34 6130 6051 2199 108 10 3 chr18 14807917 14808222 -71869326 - AluSp SINE Alu -6 307 1 455 222 138 83 chr18 14808222 14808439 -71869109 - L1ME2 LINE L1 -113 6051 5811 2324 95 3 0 chr18 14808708 14809004 -71868544 - AluY SINE Alu -14 297 1 2248 110 3 0 chr18 14809238 14809537 -71868011 + AluSg SINE Alu 1 300 -10 1126 164 49 36 chr18 14809560 14809660 -71867888 - MER30 DNA MER1_type -2 228 131 2067 145 3 0 chr18 14809660 14809971 -71867577 + AluSx SINE Alu 1 312 0 2142 105 10 14 chr18 14809980 14810276 -71867272 + AluSq SINE Alu 1 295 -18 1126 164 49 36 chr18 14810276 14810390 -71867158 - MER30 DNA MER1_type -106 124 1 1721 169 97 28 chr18 14811088 14811520 -71866028 - LTR48 LTR ERV1 -1 786 325 2017 122 10 23 chr18 14811965 14812269 -71865279 - AluSx SINE Alu -5 307 8 2034 135 10 0 chr18 14812688 14812977 -71864571 + AluSq SINE Alu 1 292 -21 360 177 13 0 chr18 14813343 14813422 -71864126 - L1MB2 LINE L1 -10 6161 6082 1937 98 3 110 chr18 14813427 14813753 -71863795 - AluSg1 SINE Alu -18 291 1 2262 105 3 0 chr18 14813755 14814051 -71863497 - AluSp SINE Alu -11 302 6 450 0 0 0 chr18 14814067 14814117 -71863431 + (TG)n Simple_repeat Simple_repeat 1 50 0 2058 123 0 0 chr18 14814117 14814393 -71863155 - AluSg1 SINE Alu -33 276 1 2136 117 31 0 chr18 14815080 14815371 -71862177 - AluSq SINE Alu -13 300 1 1916 119 68 20 chr18 14815371 14815546 -71862002 - AluSx SINE Alu -3 309 113 2273 112 0 3 chr18 14815546 14815850 -71861698 - AluSg SINE Alu -7 303 1 1916 119 68 20 chr18 14815850 14815969 -71861579 - AluSx SINE Alu -199 113 1 2217 119 0 0 chr18 14818462 14818773 -71858775 - AluY SINE Alu 0 311 1 241 213 32 53 chr18 14819855 14819949 -71857599 + MIR SINE MIR 41 132 -76 264 179 30 45 chr18 14820821 14820888 -71856660 + AluSp/q SINE Alu 164 229 -74 560 199 22 15 chr18 14820919 14821055 -71856493 + AluSp/q SINE Alu 176 312 -1 32 0 0 0 chr18 14821088 14821120 -71856428 + AT_rich Low_complexity Low_complexity 1 32 0 1149 104 146 57 chr18 14821234 14821480 -71856068 - AluJo SINE Alu 0 319 55 1975 155 0 10 chr18 14821638 14821942 -71855606 + AluSx SINE Alu 1 301 -11 1221 116 0 12 chr18 14822315 14822487 -71855061 - AluJo/FRAM SINE Alu -7 305 136 1408 178 51 17 chr18 14822489 14822781 -71854767 - AluJo SINE Alu -10 302 1 1438 149 7 90 chr18 14823156 14823311 -71854237 + AluJo SINE Alu 1 121 -191 2116 135 3 0 chr18 14823311 14823614 -71853934 + AluSg SINE Alu 1 304 -6 1438 149 7 90 chr18 14823614 14823759 -71853789 + AluJo SINE Alu 121 276 -36 1080 121 40 0 chr18 14823758 14823907 -71853641 - AluSc SINE Alu -52 257 103 * 1215 144 0 92 chr18 14823916 14824145 -71853403 + AluSg/x SINE Alu 98 305 -7 199 309 49 37 chr18 14824235 14824397 -71853151 + MIR SINE MIR 78 241 -21 446 163 37 141 chr18 14824434 14824518 -71853030 + MIR SINE MIR 24 90 -172 2454 95 0 0 chr18 14824518 14824823 -71852725 - AluSg SINE Alu -3 307 3 446 163 37 141 chr18 14824823 14824873 -71852675 + MIR SINE MIR 90 144 -118 309 51 0 0 chr18 14824934 14824973 -71852575 + (TG)n Simple_repeat Simple_repeat 2 40 0 702 174 26 0 chr18 14824977 14825092 -71852456 - FLAM_C SINE Alu -23 120 3 1239 153 0 0 chr18 14825105 14825295 -71852253 - AluSg/x SINE Alu -18 292 103 407 176 0 88 chr18 14825295 14825397 -71852151 - AluSq SINE Alu -113 200 108 1337 82 11 11 chr18 14825397 14825581 -71851967 - AluSp SINE Alu -14 299 116 4540 126 46 22 chr18 14825608 14827273 -71850275 - SVA Other Other -518 1170 432 1968 164 18 0 chr18 14827413 14827755 -71849793 + L1MB7 LINE L1 5621 5968 -216 740 261 133 41 chr18 14827755 14828145 -71849403 - L1MCa LINE L1 -959 5605 5180 316 278 17 15 chr18 14828167 14828345 -71849203 - L1MEc LINE L1 -4887 1366 1135 2461 78 0 10 chr18 14828349 14828658 -71848890 - AluY SINE Alu -5 306 1 376 237 43 0 chr18 14828659 14828752 -71848796 - L1MD1 LINE L1 -34 6208 6112 1410 173 4 5 chr18 14828756 14829063 -71848485 + MER2 DNA MER2_type 5 345 0 1586 213 17 47 chr18 14829064 14829472 -71848076 - L1MD2 LINE L1 -132 6227 5832 573 237 75 26 chr18 14829456 14829722 -71847826 - L1MEc LINE L1 -5308 1088 810 * 5850 59 14 7 chr18 14830980 14831705 -71845843 - SVA Other Other -1 1385 656 392 248 0 34 chr18 14831705 14831822 -71845726 - L1MEc LINE L1 -5581 815 703 2111 100 7 10 chr18 14831822 14832131 -71845417 + L1PB1 LINE L1 5844 6151 0 564 183 16 8 chr18 14832529 14832655 -71844893 + MIR SINE MIR 82 208 -54 283 327 60 7 chr18 14833045 14833195 -71844353 - L1MCa LINE L1 -1533 5031 4874 801 288 71 9 chr18 14833248 14833571 -71843977 - HAL1 LINE L1 -690 1817 1475 3987 239 32 53 chr18 14834189 14834717 -71842831 - L1MCa LINE L1 -2393 4171 3634 1793 175 0 26 chr18 14834717 14835020 -71842528 - AluJo SINE Alu -11 301 7 3987 239 32 53 chr18 14835020 14835894 -71841654 - L1MCa LINE L1 -2930 3634 2798 2186 145 94 8 chr18 14835894 14836288 -71841260 - MSTA LTR MaLR 0 428 1 401 119 0 0 chr18 14836312 14836371 -71841177 - Tigger4(Zombi) DNA MER2_type -2671 60 2 408 197 16 57 chr18 14836373 14836495 -71841053 + ERVL LTR ERVL 5348 5464 -300 369 236 104 9 chr18 14836516 14836622 -71840926 - L1MCa LINE L1 -3938 2807 2692 1799 176 181 19 chr18 14836731 14837255 -71840293 - L1MCa LINE L1 -3947 2617 2058 6001 122 11 30 chr18 14837377 14839129 -71838419 - L1PA14 LINE L1 -12 6149 4417 2460 78 0 7 chr18 14839129 14839437 -71838111 - AluY SINE Alu -4 307 2 6001 122 11 30 chr18 14839437 14839580 -71837968 - L1PA14 LINE L1 -1744 4417 4273 1408 172 66 12 chr18 14840427 14841189 -71836359 - L1MCa LINE L1 -4460 2104 1115 3481 128 21 26 chr18 14841222 14841799 -71835749 - MER4B LTR ERV1 -36 574 1 1379 201 39 15 chr18 14841799 14842132 -71835416 - L1MCa LINE L1 -4928 1117 777 1315 263 38 23 chr18 14842129 14842521 -71835027 - L1MCa LINE L1 -6028 536 139 * 574 289 142 42 chr18 14842596 14843216 -71834332 - HAL1 LINE L1 -1663 844 163 2278 67 0 26 chr18 14843228 14843541 -71834007 - AluY SINE Alu -6 305 1 728 87 0 0 chr18 14843541 14843633 -71833915 - AluSg1 SINE Alu -216 93 2 1937 57 0 8 chr18 14843640 14843938 -71833610 - AluY SINE Alu 0 336 41 674 296 117 0 chr18 14844217 14844423 -71833125 - MIR SINE MIR -5 257 28 1674 162 7 3 chr18 14846117 14846407 -71831141 + AluJb SINE Alu 1 291 -21 1900 126 0 30 chr18 14846754 14847055 -71830493 - AluSg1 SINE Alu -17 292 1 1992 126 13 7 chr18 14847726 14848036 -71829512 - AluSx SINE Alu 0 312 1 2157 110 3 0 chr18 14848414 14848722 -71828826 + AluSc SINE Alu 1 309 0 497 215 89 15 chr18 14849069 14849204 -71828344 - MER110-int LTR ERV1 -52 4595 4451 3583 147 22 7 chr18 14849204 14849789 -71827759 + MER4D LTR ERV1 1 594 -309 2063 80 0 17 chr18 14849799 14850086 -71827462 - AluY SINE Alu -29 282 1 5487 114 16 37 chr18 14850141 14850975 -71826573 + MER50-int LTR ERV1 6382 7197 -8 3959 138 60 26 chr18 14850975 14851429 -71826119 + MER50 LTR ERV1 1 488 -246 1848 96 20 55 chr18 14851429 14851744 -71825804 + AluSx SINE Alu 1 305 0 3959 138 60 26 chr18 14851744 14851971 -71825577 + MER50 LTR ERV1 488 706 -28 2360 96 77 8 chr18 14852089 14852442 -71825106 + MER51B LTR ERV1 1 377 0 2569 166 68 40 chr18 14852798 14853370 -71824178 - LTR49 LTR ERV1 -7 588 1 3284 117 34 2 chr18 14853454 14853952 -71823596 + MER75 DNA T2_type 1 514 0 1117 278 64 84 chr18 14854041 14854330 -71823218 + MER110-int LTR ERV1 3761 4054 -593 2314 81 3 0 chr18 14854330 14854638 -71822910 + AluY SINE Alu 1 309 -2 1117 278 64 84 chr18 14854638 14855053 -71822495 + MER110-int LTR ERV1 4054 4451 -196 1140 158 8 142 chr18 14855057 14855093 -71822455 - MER4D LTR ERV1 0 886 847 2270 67 0 14 chr18 14855093 14855390 -71822158 - AluY SINE Alu -18 293 1 1140 158 8 142 chr18 14855390 14855714 -71821834 - MER4D LTR ERV1 -39 847 548 1003 114 0 78 chr18 14855714 14855881 -71821667 + AluSq SINE Alu 1 154 -159 315 71 0 0 chr18 14856025 14856067 -71821481 + (A)n Simple_repeat Simple_repeat 1 42 0 1019 71 0 0 chr18 14856074 14856200 -71821348 + AluSc SINE Alu 9 134 -175 2259 101 0 0 chr18 14856200 14856508 -71821040 + AluY SINE Alu 1 308 -3 608 184 92 96 chr18 14856508 14856740 -71820808 - MER4-int LTR ERV1 -1768 4563 4331 1848 141 14 0 chr18 14856740 14857030 -71820518 - AluSx SINE Alu -18 294 1 608 184 92 96 chr18 14857030 14857058 -71820490 - MER4-int LTR ERV1 -2000 4331 4304 542 237 100 36 chr18 14857223 14857472 -71820076 - MER4-int LTR ERV1 -1993 2943 2679 281 134 0 30 chr18 14857540 14857607 -71819941 - MER4-int LTR ERV1 -2807 3791 3727 497 319 70 22 chr18 14857794 14858023 -71819525 + MIR SINE MIR 23 262 0 418 298 26 0 chr18 14858031 14858145 -71819403 + L2 LINE L2 3193 3309 -4 617 297 12 0 chr18 14858982 14859147 -71818401 - MIR SINE MIR -68 194 28 255 323 16 40 chr18 14859149 14859273 -71818275 - L2 LINE L2 0 3313 3193 300 330 69 16 chr18 14859374 14859562 -71817986 - MIR SINE MIR -54 208 11 1948 146 7 0 chr18 14860083 14860378 -71817170 + AluSx SINE Alu 1 297 -15 477 0 0 0 chr18 14860693 14860746 -71816802 + (CA)n Simple_repeat Simple_repeat 2 54 0 615 255 18 58 chr18 14860777 14861055 -71816493 - AluSg1 SINE Alu -40 269 3 609 258 74 37 chr18 14861254 14861471 -71816077 - MIR SINE MIR -17 245 21 755 299 34 19 chr18 14861524 14861845 -71815703 - MLT1I LTR MaLR -10 399 74 2291 83 6 16 chr18 14863399 14863712 -71813836 - AluSg SINE Alu 0 310 1 2144 103 3 6 chr18 14863779 14864090 -71813458 - AluSg SINE Alu 0 310 1 290 284 7 28 chr18 14864092 14864233 -71813315 - MER113 DNA MER1_type? -290 231 94 383 340 93 25 chr18 14864723 14865002 -71812546 - L1 LINE L1 -3182 2964 2667 218 171 0 0 chr18 14865640 14865675 -71811873 + CT-rich Low_complexity Low_complexity 1 35 0 229 156 78 0 chr18 14865690 14865754 -71811794 + CT-rich Low_complexity Low_complexity 5 73 0 1124 119 15 20 chr18 14865880 14866082 -71811466 - AluSc SINE Alu -108 201 1 5487 114 16 37 chr18 14866137 14866971 -71810577 + MER50-int LTR ERV1 6382 7197 -8 3959 138 60 26 chr18 14866971 14867425 -71810123 + MER50 LTR ERV1 1 488 -246 1848 96 20 55 chr18 14867425 14867740 -71809808 + AluSx SINE Alu 1 305 0 3959 138 60 26 chr18 14867740 14867967 -71809581 + MER50 LTR ERV1 488 706 -28 2360 96 77 8 chr18 14868085 14868438 -71809110 + MER51B LTR ERV1 1 377 0 2569 166 68 40 chr18 14868794 14869366 -71808182 - LTR49 LTR ERV1 -7 588 1 3284 117 34 2 chr18 14869450 14869948 -71807600 + MER75 DNA T2_type 1 514 0 562 256 31 44 chr18 14870037 14870197 -71807351 + MER110-int LTR ERV1 3761 3918 -729 1920 105 0 48 chr18 14870326 14870620 -71806928 + AluSq SINE Alu 1 280 -33 4014 116 22 7 chr18 14870620 14871215 -71806333 - MER4D LTR ERV1 -299 604 1 497 215 89 15 chr18 14871215 14871350 -71806198 + MER110-int LTR ERV1 4451 4595 -52 2161 108 3 0 chr18 14871700 14872006 -71805542 - AluSc SINE Alu -2 307 1 1979 124 13 7 chr18 14872384 14872690 -71804858 + AluSx SINE Alu 1 308 -4 1164 183 12 1 chr18 14873177 14873396 -71804152 - L1PA10 LINE L1 -325 5843 5621 4354 110 42 28 chr18 14873534 14874699 -71802849 + SVA Other Other 432 1170 -216 818 236 92 18 chr18 14874711 14874995 -71802553 + L1ME2 LINE L1 5811 6115 -49 427 272 27 14 chr18 14874894 14875041 -71802507 + L1MA10 LINE L1 6176 6324 -10 * 224 157 20 0 chr18 14875420 14875471 -71802077 + T-rich Low_complexity Low_complexity 5 56 0 344 263 86 43 chr18 14875478 14875687 -71801861 + L1ME3A LINE L1 5743 5960 -210 1908 234 78 21 chr18 14876088 14876601 -71800947 + MLT1F LTR MaLR 1 542 0 505 273 25 20 chr18 14876601 14876799 -71800749 + MLT1F-int LTR MaLR 3 201 -1170 240 105 193 0 chr18 14877274 14877331 -71800217 + MLT1F-int LTR MaLR 827 894 -477 683 260 92 74 chr18 14877508 14877846 -71799702 + MLT1F-int LTR MaLR 1028 1371 0 1387 234 18 24 chr18 14877846 14878179 -71799369 + MLT1F LTR MaLR 1 331 -211 258 229 0 16 chr18 14878179 14878240 -71799308 + MLT1F LTR MaLR 481 540 -2 446 234 117 22 chr18 14878376 14878513 -71799035 + MLT1F LTR MaLR 385 534 -8 1791 119 0 25 chr18 14878767 14879053 -71798495 - AluSx SINE Alu 0 312 34 617 320 43 23 chr18 14880484 14880787 -71796761 - L2 LINE L2 -1384 1930 1622 261 180 98 0 chr18 14881200 14881261 -71796287 - MIR3 SINE MIR -18 190 124 840 172 7 20 chr18 14882856 14883007 -71794541 + FRAM SINE Alu 5 153 -13 637 330 118 44 chr18 14883437 14884693 -71792855 + L2 LINE L2 1311 2659 -655 188 257 33 124 chr18 14885081 14885291 -71792257 + L2 LINE L2 3123 3313 0 376 237 22 74 chr18 14885404 14885539 -71792009 - MER94 DNA DNA -1 133 6 389 342 81 47 chr18 14885887 14886121 -71791427 + L3 LINE CR1 1290 1531 -46 24 32 0 0 chr18 14886496 14886527 -71791021 + AT_rich Low_complexity Low_complexity 1 31 0 3771 152 17 2 chr18 14887499 14888093 -71789455 + LTR26 LTR ERV1 1 603 0 330 281 18 132 chr18 14888537 14888704 -71788844 - MIR3 SINE MIR -14 194 47 321 293 93 38 chr18 14889132 14889458 -71788090 - L2 LINE L2 -217 3096 2711 562 241 109 68 chr18 14892852 14893163 -71784385 - MER102a DNA MER1_type 0 330 7 225 0 0 0 chr18 14894788 14894813 -71782735 + (GA)n Simple_repeat Simple_repeat 1 25 0 501 213 77 68 chr18 14894938 14895159 -71782389 - MER4C LTR ERV1 -4 461 270 481 177 44 26 chr18 14895226 14895339 -71782209 - MER4C LTR ERV1 -346 119 5 2297 160 133 22 chr18 14897830 14898366 -71779182 - LTR49 LTR ERV1 0 595 1 347 273 135 59 chr18 14899142 14899431 -71778117 + LTR16A1 LTR ERVL 146 456 -1 566 249 17 62 chr18 14899627 14899804 -71777744 + MER63A DNA MER1_type 40 208 -2 773 319 99 25 chr18 14900367 14901073 -71776475 - L2 LINE L2 -340 2974 2217 3868 152 29 37 chr18 14901166 14901645 -71775903 + L1MC1 LINE L1 5613 6085 -248 2145 109 3 0 chr18 14901645 14901928 -71775620 + AluSx SINE Alu 12 295 -17 3868 152 29 37 chr18 14901928 14902170 -71775378 + L1MC1 LINE L1 6085 6328 -5 765 255 81 91 chr18 14902371 14903074 -71774474 + HAL1 LINE L1 1812 2507 0 304 246 0 0 chr18 14903161 14903222 -71774326 - L2 LINE L2 -18 3295 3235 828 132 31 19 chr18 14903926 14904085 -71773463 - L1MA7 LINE L1 -4 6287 6127 896 281 73 35 chr18 14904087 14904486 -71773062 + REP3 LTR ERV 56 469 -93 1515 133 21 0 chr18 14904519 14904753 -71772795 + L1M2 LINE L1 5567 5805 -486 906 209 0 0 chr18 14905598 14905761 -71771787 + FRAM SINE Alu 1 162 -14 2206 93 3 10 chr18 14905765 14906054 -71771494 + AluSp SINE Alu 1 287 -26 22 0 0 0 chr18 14906054 14906076 -71771472 + AT_rich Low_complexity Low_complexity 1 22 0 241 235 69 20 chr18 14906205 14906307 -71771241 - L1MC5 LINE L1 -65 7896 7790 854 210 89 71 chr18 14906331 14906669 -71770879 - L1ME2 LINE L1 -10 6088 5745 * 7939 255 90 16 chr18 14906667 14907910 -71769638 - L1ME2 LINE L1 -735 5363 4213 1732 148 10 58 chr18 14907910 14908221 -71769327 + AluJo SINE Alu 1 296 -16 7939 255 90 16 chr18 14908221 14909894 -71767654 - L1ME2 LINE L1 -1885 4213 2231 1257 232 119 26 chr18 14909894 14910321 -71767227 + MLT1C LTR MaLR 1 467 0 1475 200 62 17 chr18 14910329 14910684 -71766864 - MLT1A2 LTR MaLR -3 371 1 788 245 67 32 chr18 14910685 14911028 -71766520 - L1ME2 LINE L1 -3985 2276 1922 796 197 14 53 chr18 14911028 14911236 -71766312 - MER3 DNA MER1_type 0 209 10 1641 279 68 42 chr18 14911236 14911441 -71766107 - L1ME2 LINE L1 -4357 1904 1706 2570 58 3 3 chr18 14911441 14911751 -71765797 + AluY SINE Alu 1 310 -1 1641 279 68 42 chr18 14911751 14913084 -71764464 - L1ME2 LINE L1 -4555 1706 271 448 202 229 0 chr18 14913088 14913197 -71764351 + MER45A DNA AcHobo 5 138 -40 1924 157 0 23 chr18 14913230 14913530 -71764018 + AluJo SINE Alu 1 293 -19 250 251 147 58 chr18 14913742 14913933 -71763615 + L2 LINE L2 3106 3313 0 1869 93 16 74 chr18 14914187 14914499 -71763049 + AluSx SINE Alu 1 294 -18 21 71 0 0 chr18 14915838 14915880 -71761668 + GC_rich Low_complexity Low_complexity 1 42 0 32 75 0 0 chr18 14916162 14916229 -71761319 + GC_rich Low_complexity Low_complexity 1 67 0 7916 17 0 0 chr18 14916645 14917940 -71759608 - L1PA3 LINE L1 0 6155 4857 338 311 47 17 chr18 14918609 14918816 -71758732 + HAL1b LINE L1 416 1693 -722 988 119 35 7 chr18 14918825 14918968 -71758580 + AluJb SINE Alu 9 155 -157 650 200 9 0 chr18 14919010 14919125 -71758423 - AluSq/x SINE Alu -192 120 5 509 194 0 11 chr18 14919943 14920036 -71757512 + AluJo/FLAM SINE Alu 27 118 -194 1883 172 10 0 chr18 14920036 14920333 -71757215 - AluJb SINE Alu -12 300 1 1566 168 61 71 chr18 14920902 14921296 -71756252 - MLT1B LTR MaLR 0 390 1 494 245 0 0 chr18 14921307 14921409 -71756139 - Charlie8 DNA MER1_type -2172 245 144 285 183 0 0 chr18 14922076 14922136 -71755412 + (CA)n Simple_repeat Simple_repeat 1 60 0 2447 67 0 10 chr18 14922404 14922702 -71754846 + AluY SINE Alu 1 295 -16 257 272 177 19 chr18 14923091 14923249 -71754299 + MIR SINE MIR 15 197 -65 1985 108 3 67 chr18 14923439 14923753 -71753795 + AluSx SINE Alu 1 294 -18 2362 103 0 3 chr18 14924394 14924696 -71752852 + AluSc SINE Alu 1 301 -8 1857 123 7 67 chr18 14925353 14925698 -71751850 - AluSx SINE Alu 0 327 1 1422 172 47 41 chr18 14925883 14926202 -71751346 + L1MC1 LINE L1 5998 6318 -15 214 296 40 72 chr18 14927147 14927272 -71750276 - L2 LINE L2 -14 3258 3138 1902 110 107 0 chr18 14927492 14927764 -71749784 + AluSx SINE Alu 1 301 -11 2190 120 0 0 chr18 14929018 14929326 -71748222 + AluSx SINE Alu 1 308 -4 360 0 0 0 chr18 14929978 14930018 -71747530 + (CA)n Simple_repeat Simple_repeat 1 40 0 5106 156 46 57 chr18 14930966 14931933 -71745615 - L1MA10 LINE L1 0 6334 5379 2024 124 3 0 chr18 14931933 14932215 -71745333 - AluSx SINE Alu -7 305 23 5106 156 46 57 chr18 14932215 14932340 -71745208 - L1MA10 LINE L1 -955 5379 5254 5207 136 48 0 chr18 14932355 14933187 -71744361 - Tigger1 DNA MER2_type -1 2417 1546 1151 143 0 0 chr18 14933204 14933358 -71744190 - AluJb SINE Alu -26 286 133 10040 129 21 13 chr18 14933358 14934894 -71742654 - Tigger1 DNA MER2_type -869 1549 2 8099 187 24 11 chr18 14934895 14936503 -71741045 - L1MA10 LINE L1 -905 5241 3614 2928 229 30 24 chr18 14936618 14937051 -71740497 - L1M4c LINE L1 -4516 1625 1196 2359 75 0 0 chr18 14937051 14937357 -71740191 - AluY SINE Alu 0 306 1 2928 229 30 24 chr18 14937357 14938114 -71739434 - L1M4c LINE L1 -4945 1196 605 802 344 55 34 chr18 14938318 14938734 -71738814 - L1M4c LINE L1 -5716 425 1 2284 166 26 19 chr18 14939332 14939830 -71737718 - MER89 LTR ERV1 -3 556 1 1295 161 62 127 chr18 14940373 14941037 -71736511 - MER4A LTR ERV1 -2 463 1 1896 143 33 13 chr18 14941052 14941352 -71736196 + AluJb SINE Alu 2 307 -5 2725 42 0 6 chr18 14941360 14941672 -71735876 + AluY SINE Alu 1 310 -1 462 307 38 33 chr18 14941672 14941875 -71735673 - L2 LINE L2 -211 3102 2896 204 271 51 17 chr18 14941942 14942001 -71735547 - L2 LINE L2 -689 2625 2565 2154 102 6 28 chr18 14942005 14942368 -71735180 + L1PA13 LINE L1 5316 5676 -487 4021 103 220 137 chr18 14942368 14943652 -71733896 - pTR5 LTR ERV1 0 2438 743 3386 99 23 4 chr18 14943652 14944137 -71733411 + L1PA13 LINE L1 5670 6163 0 233 210 37 12 chr18 14944319 14944400 -71733148 - L1ME4a LINE L1 0 6121 6039 263 207 17 0 chr18 14945193 14945251 -71732297 - L2 LINE L2 -800 2514 2456 425 310 161 0 chr18 14946166 14946321 -71731227 - MER5A DNA MER1_type 0 189 10 6723 186 31 6 chr18 14946341 14947655 -71729893 - Cheshire DNA MER1_type 0 2420 1074 1396 111 0 10 chr18 14947655 14947854 -71729694 + AluSq SINE Alu 1 197 -116 534 164 0 82 chr18 14947865 14947987 -71729561 - AluSq SINE Alu -158 155 44 * 617 136 0 0 chr18 14947985 14948119 -71729429 + AluSq SINE Alu 199 332 0 2845 203 94 14 chr18 14948120 14948772 -71728776 - Cheshire DNA MER1_type -1333 1087 384 2012 109 0 32 chr18 14948772 14948913 -71728635 + AluSx SINE Alu 1 145 -167 2422 72 3 0 chr18 14948913 14949218 -71728330 + AluSp SINE Alu 1 306 -7 2012 109 0 32 chr18 14949218 14949389 -71728159 + AluSx SINE Alu 145 303 -9 1079 177 84 18 chr18 14949404 14949630 -71727918 - Cheshire DNA MER1_type -2179 241 1 454 160 11 32 chr18 14950199 14950291 -71727257 - MLT1D LTR MaLR -8 497 408 1141 110 0 7 chr18 14950291 14950446 -71727102 - MSTA LTR MaLR 0 428 275 252 163 0 0 chr18 14950450 14950493 -71727055 - L1ME4a LINE L1 -441 5903 5861 474 232 0 0 chr18 14950502 14950597 -71726951 - MLT1B LTR MaLR 0 390 296 4060 177 40 1 chr18 14950597 14951314 -71726234 - ERVL LTR ERVL -1973 3791 3047 2396 135 34 3 chr18 14951314 14951692 -71725856 + MLT1B LTR MaLR 1 390 0 2967 124 66 0 chr18 14951698 14952151 -71725397 - L1MC2 LINE L1 -397 5947 5465 969 185 99 22 chr18 14952170 14952402 -71725146 - L1MC2 LINE L1 -1223 4923 4674 303 160 0 0 chr18 14952409 14952459 -71725089 + LTR67 LTR ERVL 479 528 -29 595 137 78 0 chr18 14953574 14953676 -71723872 + AluJo SINE Alu 66 175 -137 1247 121 29 0 chr18 14953924 14954130 -71723418 - LTR56 LTR ERV1 -121 324 113 1418 186 49 0 chr18 14954134 14954398 -71723150 + AluJo SINE Alu 6 282 -30 586 120 51 171 chr18 14954404 14954562 -71722986 - LTR56 LTR ERV1 -298 147 9 216 326 134 52 chr18 14955582 14955889 -71721659 + L2 LINE L2 2948 3279 -34 1264 214 10 53 chr18 14955901 14956205 -71721343 - MER4D LTR ERV1 -11 892 602 782 93 0 0 chr18 14956206 14956343 -71721205 - AluY SINE Alu 0 311 175 2087 110 3 3 chr18 14956345 14956644 -71720904 - AluSx SINE Alu -13 299 1 2153 123 0 0 chr18 14956667 14956977 -71720571 + AluSx SINE Alu 2 311 -1 355 152 0 0 chr18 14957013 14957090 -71720458 - MER4D LTR ERV1 -588 284 100 1450 164 28 45 chr18 14957135 14957327 -71720221 - MER49 LTR ERV1 -640 283 96 2172 95 0 3 chr18 14957327 14957632 -71719916 - AluSx SINE Alu -8 304 1 1450 164 28 45 chr18 14957632 14957726 -71719822 - MER49 LTR ERV1 -827 96 2 4118 164 34 44 chr18 14957839 14958720 -71718828 - L1MB7 LINE L1 -23 6161 5290 1586 155 177 14 chr18 14959707 14960069 -71717479 + L1PB4 LINE L1 5734 6156 0 2289 76 10 0 chr18 14960320 14960622 -71716926 - AluSc SINE Alu -2 307 3 2034 130 0 16 chr18 14961219 14961534 -71716014 - AluSq SINE Alu -3 310 1 1780 156 0 13 chr18 14961666 14961967 -71715581 + AluJb SINE Alu 15 311 -1 323 94 0 19 chr18 14961967 14962020 -71715528 + (GGAA)n Simple_repeat Simple_repeat 1 52 0 1717 171 7 0 chr18 14962298 14962578 -71714970 + AluJo SINE Alu 1 282 -30 246 221 138 69 chr18 14962886 14963271 -71714277 + L1MC5 LINE L1 7623 7998 -43 649 139 0 0 chr18 14963271 14963379 -71714169 - L1MA3 LINE L1 0 6305 6198 246 221 138 69 chr18 14963379 14963419 -71714129 + L1MC5 LINE L1 7998 8034 -7 409 286 43 14 chr18 14963818 14963958 -71713590 + MER91A DNA MER1_type 1 144 -52 1693 110 0 4 chr18 14964695 14964932 -71712616 - AluSq SINE Alu -77 236 1 641 262 13 86 chr18 14965358 14965671 -71711877 - L1MC4 LINE L1 0 8042 7753 1798 313 68 28 chr18 14965780 14966252 -71711296 - L1MC4 LINE L1 -460 7582 7130 282 29 0 0 chr18 14966252 14966287 -71711261 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 1798 313 68 28 chr18 14966287 14966905 -71710643 - L1MC4 LINE L1 -912 7130 6449 279 398 32 8 chr18 14967698 14967821 -71709727 + L2 LINE L2 3132 3257 -15 189 0 0 0 chr18 14967825 14967846 -71709702 + (TGAA)n Simple_repeat Simple_repeat 4 24 0 1431 133 0 4 chr18 14968031 14968264 -71709284 - L1MB3 LINE L1 0 6183 5952 185 244 23 93 chr18 14968318 14968404 -71709144 + L2 LINE L2 3183 3262 -10 275 281 18 35 chr18 14968552 14968666 -71708882 - MIR SINE MIR -41 221 110 1713 156 0 4 chr18 14970913 14971189 -71706359 - AluJb SINE Alu -30 282 8 25 83 0 0 chr18 14971606 14971666 -71705882 + AT_rich Low_complexity Low_complexity 1 60 0 1857 159 3 0 chr18 14972513 14972815 -71704733 + AluJo SINE Alu 2 304 -8 289 282 128 26 chr18 14974519 14974636 -71702912 + MIR SINE MIR 119 247 -15 21 0 0 0 chr18 14974667 14974688 -71702860 + AT_rich Low_complexity Low_complexity 1 21 0 2183 107 0 3 chr18 14975027 14975336 -71702212 + AluSx SINE Alu 1 308 -4 427 323 72 66 chr18 14975689 14976023 -71701525 - L2 LINE L2 0 3272 2937 218 364 68 21 chr18 14976775 14977113 -71700435 - L2 LINE L2 -1362 1952 1599 21 36 0 0 chr18 14979397 14979425 -71698123 + AT_rich Low_complexity Low_complexity 1 28 0 2128 97 0 10 chr18 14980317 14980617 -71696931 + AluSx SINE Alu 1 297 -15 357 62 0 0 chr18 14981172 14981220 -71696328 + (TG)n Simple_repeat Simple_repeat 2 49 0 2186 47 22 7 chr18 14981450 14981759 -71695789 - AluY SINE Alu 0 313 1 35 24 0 0 chr18 14982694 14982736 -71694812 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr18 14983183 14983211 -71694337 + AT_rich Low_complexity Low_complexity 1 28 0 1079 295 125 16 chr18 14983392 14983954 -71693594 - L2 LINE L2 -414 2900 2278 357 319 217 15 chr18 14983974 14984445 -71693103 - L2 LINE L2 -1318 1996 1431 2266 99 0 0 chr18 14985075 14985387 -71692161 + AluSx SINE Alu 1 312 0 539 317 81 5 chr18 14986987 14987173 -71690375 + MIR SINE MIR 34 233 -29 1533 231 141 70 chr18 14989302 14989595 -71687953 - L1MC4 LINE L1 0 8042 7771 1595 108 173 11 chr18 14989595 14989855 -71687693 - AluSx SINE Alu 0 302 1 1533 231 141 70 chr18 14989855 14990284 -71687264 - L1MC4 LINE L1 -271 7771 7261 2099 127 0 7 chr18 14990284 14990591 -71686957 - AluSx SINE Alu -7 305 1 1533 231 141 70 chr18 14990591 14990634 -71686914 - L1MC4 LINE L1 -781 7261 7222 1154 149 127 19 chr18 14990719 14990987 -71686561 + AluSg1 SINE Alu 11 307 -2 2736 160 31 8 chr18 14991464 14991982 -71685566 - L1MA4 LINE L1 -4 6296 5767 2337 82 3 3 chr18 14994503 14994797 -71682751 + AluSp SINE Alu 1 294 -19 2406 53 0 4 chr18 14994797 14995104 -71682444 + AluY SINE Alu 1 306 0 321 57 133 0 chr18 14995395 14995553 -71681995 + (TA)n Simple_repeat Simple_repeat 1 179 0 36 53 0 0 chr18 14995554 14995611 -71681937 + AT_rich Low_complexity Low_complexity 1 57 0 26 30 0 0 chr18 14996465 14996498 -71681050 + AT_rich Low_complexity Low_complexity 1 33 0 33 25 0 0 chr18 14996627 14996667 -71680881 + AT_rich Low_complexity Low_complexity 1 40 0 2291 94 10 10 chr18 14997303 14997610 -71679938 + AluSq SINE Alu 1 307 -6 191 275 0 0 chr18 14997808 14997848 -71679700 - L2 LINE L2 -31 3241 3202 1950 127 0 20 chr18 14998080 14998372 -71679176 - AluSx SINE Alu -7 305 20 287 253 79 73 chr18 14998917 14999095 -71678453 - MIR3 SINE MIR -9 199 21 350 197 13 0 chr18 14999158 14999234 -71678314 + MER116 DNA Mariner 1 77 -3 1548 175 3 58 chr18 14999852 15000161 -71677387 + AluJo SINE Alu 1 292 -20 802 241 73 17 chr18 15000240 15000472 -71677076 + MIR SINE MIR 7 251 -11 397 318 138 0 chr18 15000899 15001088 -71676460 - MIR SINE MIR -28 234 20 1994 163 0 3 chr18 15002794 15003101 -71674447 + AluJo SINE Alu 2 307 -5 421 287 101 16 chr18 15004156 15004344 -71673204 - MIR SINE MIR -46 216 13 219 210 40 50 chr18 15004911 15005011 -71672537 + MIR3 SINE MIR 89 187 -21 204 292 97 18 chr18 15006040 15006153 -71671395 - L2 LINE L2 0 3272 3151 23 33 0 0 chr18 15006737 15006767 -71670781 + AT_rich Low_complexity Low_complexity 1 30 0 249 269 124 21 chr18 15007017 15007162 -71670386 + MIR SINE MIR 103 262 0 914 241 49 40 chr18 15008255 15008403 -71669145 + L1ME3A LINE L1 5667 5812 -358 2254 123 0 0 chr18 15008403 15008712 -71668836 + AluSx SINE Alu 1 309 -3 914 241 49 40 chr18 15008712 15008965 -71668583 + L1ME3A LINE L1 5812 5962 -208 449 255 144 0 chr18 15009591 15009744 -71667804 + MIR SINE MIR 31 205 -57 985 196 84 33 chr18 15009977 15010252 -71667296 - MER33 DNA MER1_type -22 302 14 2398 87 0 10 chr18 15012806 15013118 -71664430 - AluY SINE Alu -1 310 2 712 106 0 29 chr18 15013346 15013450 -71664098 + FLAM_C SINE Alu 21 121 -22 2478 70 0 7 chr18 15013959 15014261 -71663287 + AluY SINE Alu 1 300 -11 409 269 62 28 chr18 15014512 15014657 -71662891 - MER5B DNA MER1_type -2 176 27 2199 77 3 80 chr18 15014958 15015283 -71662265 + AluSx SINE Alu 1 300 -12 264 59 0 0 chr18 15015283 15015317 -71662231 + (TA)n Simple_repeat Simple_repeat 2 35 0 2478 74 7 3 chr18 15017015 15017325 -71660223 - AluY SINE Alu 0 311 1 252 143 0 0 chr18 15018536 15018578 -71658970 + (TCCC)n Simple_repeat Simple_repeat 1 42 0 2076 116 0 7 chr18 15018578 15018854 -71658694 - AluSx SINE Alu -38 274 1 471 268 16 0 chr18 15018968 15019091 -71658457 + L2 LINE L2 3187 3311 -2 1739 150 47 61 chr18 15019365 15019666 -71657882 + L1M3 LINE L1 4964 5268 -912 1723 164 3 24 chr18 15019666 15019964 -71657584 + AluJo SINE Alu 5 296 -16 1739 150 47 61 chr18 15019964 15020012 -71657536 + L1M3 LINE L1 5268 5315 -865 2005 101 56 7 chr18 15020012 15020298 -71657250 + AluSc SINE Alu 1 300 -9 1739 150 47 61 chr18 15020298 15020496 -71657052 + L1M3 LINE L1 5315 5520 -660 198 103 0 0 chr18 15020918 15020947 -71656601 + (A)n Simple_repeat Simple_repeat 1 29 0 180 231 0 0 chr18 15021332 15021384 -71656164 + CT-rich Low_complexity Low_complexity 4 55 0 451 222 36 11 chr18 15022253 15022410 -71655138 - MLT1J2 LTR MaLR -189 220 48 227 235 0 0 chr18 15024778 15024829 -71652719 - Tigger4(Zombi) DNA MER2_type -2680 51 1 2113 99 27 17 chr18 15025231 15025523 -71652025 - AluSg SINE Alu -15 295 1 2435 70 0 0 chr18 15026878 15027191 -71650357 - AluSq SINE Alu 0 313 1 1041 195 102 5 chr18 15027808 15028023 -71649525 + MER46A DNA MER2_type 1 236 0 271 204 34 23 chr18 15028167 15028255 -71649293 + CT-rich Low_complexity Low_complexity 6 94 0 196 214 41 10 chr18 15028448 15028546 -71649002 + (TAGA)n Simple_repeat Simple_repeat 3 103 0 413 280 13 13 chr18 15029385 15029535 -71648013 - L2 LINE L2 -6 3307 3158 1550 132 0 9 chr18 15029552 15029779 -71647769 + AluSx SINE Alu 1 225 -87 961 287 139 5 chr18 15029791 15030202 -71647346 - L2 LINE L2 -544 2770 2305 2345 157 45 0 chr18 15031343 15031770 -71645778 - L1MB3 LINE L1 -1 6182 5737 288 176 0 40 chr18 15031823 15031897 -71645651 - L1PB4 LINE L1 -2 6154 6084 225 143 0 61 chr18 15031992 15032041 -71645507 - L1PB4 LINE L1 -27 6129 6084 * 230 170 0 57 chr18 15032036 15032089 -71645459 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15032084 15032137 -71645411 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15032228 15032281 -71645267 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15032416 15032469 -71645079 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15033040 15033093 -71644455 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15033088 15033141 -71644407 - L1PB4 LINE L1 -23 6133 6084 227 140 0 60 chr18 15033187 15033237 -71644311 - L1PB4 LINE L1 -26 6130 6084 * 240 151 0 57 chr18 15033232 15033285 -71644263 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15033280 15033333 -71644215 - L1PB4 LINE L1 -23 6133 6084 * 238 151 0 57 chr18 15033373 15033426 -71644122 - L1PB4 LINE L1 -23 6133 6084 230 170 0 57 chr18 15033421 15033474 -71644074 - L1PB4 LINE L1 -23 6133 6084 * 248 132 0 57 chr18 15033517 15033570 -71643978 - L1PB4 LINE L1 -23 6133 6084 5120 153 21 5 chr18 15033664 15034819 -71642729 - L1PB4 LINE L1 -26 6130 4961 262 85 185 0 chr18 15035018 15035073 -71642475 - L1PA13 LINE L1 0 6163 6100 589 118 32 0 chr18 15035074 15035167 -71642381 - L1PA13 LINE L1 -211 5952 5857 547 93 0 0 chr18 15035167 15035242 -71642306 - AluS SINE Alu -229 83 9 1742 106 0 0 chr18 15035243 15035470 -71642078 + AluSg/x SINE Alu 82 308 -2 350 113 81 0 chr18 15035473 15035535 -71642013 - L1PA13 LINE L1 -300 5863 5797 1638 263 179 3 chr18 15035535 15036265 -71641283 - L2 LINE L2 -566 2748 1890 2702 182 22 23 chr18 15036914 15037258 -71640290 + L1MB8 LINE L1 5625 5969 -209 2098 133 3 7 chr18 15037258 15037560 -71639988 + AluSx SINE Alu 1 301 -11 2702 182 22 23 chr18 15037560 15037770 -71639778 + L1MB8 LINE L1 5969 6178 0 1596 186 0 0 chr18 15037776 15038045 -71639503 + AluSx SINE Alu 43 311 -1 1748 164 0 14 chr18 15038392 15038685 -71638863 + AluJo SINE Alu 1 289 -23 204 244 0 0 chr18 15039814 15039859 -71637689 - MIR SINE MIR -196 66 22 1148 224 5 89 chr18 15040709 15040845 -71636703 + L1ME1 LINE L1 4266 4412 -1734 2468 72 3 0 chr18 15040845 15041137 -71636411 + AluSx SINE Alu 1 293 -19 1148 224 5 89 chr18 15041137 15041257 -71636291 + L1ME1 LINE L1 4412 4541 -1605 2209 118 0 3 chr18 15041257 15041554 -71635994 + AluSg SINE Alu 1 296 -14 1148 224 5 89 chr18 15041554 15041743 -71635805 + L1ME1 LINE L1 4541 4674 -1472 1725 194 40 62 chr18 15041821 15042015 -71635533 + L1ME1 LINE L1 4672 4869 -1277 998 146 0 29 chr18 15042015 15042186 -71635362 + FRAM SINE Alu 1 166 0 1725 194 40 62 chr18 15042186 15042526 -71635022 + L1ME1 LINE L1 4869 5196 -950 2186 129 0 10 chr18 15042526 15042837 -71634711 + AluSx SINE Alu 1 308 -4 1725 194 40 62 chr18 15042837 15042852 -71634696 + L1ME1 LINE L1 5196 5210 -936 2013 168 12 35 chr18 15042838 15042894 -71634654 + L1MA6 LINE L1 5895 5951 -349 2052 131 3 20 chr18 15042894 15043199 -71634349 + AluSq SINE Alu 1 300 -13 2013 168 12 35 chr18 15043199 15043548 -71634000 + L1MA6 LINE L1 5951 6291 -9 2139 106 126 50 chr18 15043548 15043946 -71633602 - MSTA LTR MaLR 0 428 1 22 35 0 0 chr18 15043947 15043976 -71633572 + AT_rich Low_complexity Low_complexity 1 29 0 417 164 52 79 chr18 15043976 15044218 -71633330 + L1M3 LINE L1 5152 5448 -735 2658 220 59 22 chr18 15044426 15044839 -71632709 + L1ME1 LINE L1 5383 5779 -387 2070 107 10 10 chr18 15044839 15045149 -71632399 - AluY SINE Alu -1 310 1 2658 220 59 22 chr18 15045149 15045168 -71632380 + L1ME1 LINE L1 5779 5796 -370 1515 127 0 0 chr18 15045168 15045396 -71632152 + AluSg/x SINE Alu 82 309 -3 2658 220 59 22 chr18 15045396 15045645 -71631903 + L1ME1 LINE L1 5796 6090 -76 313 273 120 46 chr18 15045812 15046028 -71631520 + MIR SINE MIR 21 252 -10 1819 110 45 3 chr18 15046147 15046438 -71631110 - AluSx SINE Alu -3 309 7 1152 130 65 51 chr18 15046509 15046725 -71630823 + AluSx SINE Alu 1 219 -93 1098 245 96 43 chr18 15048405 15048874 -71628674 - MER34 LTR ERV1 -48 494 1 749 196 74 81 chr18 15048930 15049226 -71628322 + L1MC5 LINE L1 7622 7915 -46 368 280 265 0 chr18 15049880 15050069 -71627479 + MIR SINE MIR 3 241 -21 375 113 19 0 chr18 15050769 15050822 -71626726 + AluJb SINE Alu 58 111 -191 186 43 0 0 chr18 15050854 15050877 -71626671 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1553 136 3 35 chr18 15050890 15051176 -71626372 + AluJb SINE Alu 12 288 -24 291 54 0 0 chr18 15051364 15051401 -71626147 + (T)n Simple_repeat Simple_repeat 1 37 0 533 260 40 17 chr18 15052008 15052181 -71625367 + MER69A DNA AcHobo 1 177 0 2236 97 0 0 chr18 15052967 15053266 -71624282 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr18 15053918 15053939 -71623609 + AT_rich Low_complexity Low_complexity 1 21 0 2337 88 3 0 chr18 15054010 15054317 -71623231 + AluSx SINE Alu 1 308 -4 703 86 0 53 chr18 15054799 15054951 -71622597 + (GGA)n Simple_repeat Simple_repeat 2 145 0 429 317 91 0 chr18 15055265 15055508 -71622040 - L2 LINE L2 -896 2418 2154 2025 120 7 3 chr18 15055892 15056201 -71621347 + AluSx SINE Alu 1 310 -2 2526 46 0 0 chr18 15056251 15056554 -71620994 + AluY SINE Alu 1 303 -8 1069 115 6 0 chr18 15056818 15056975 -71620573 + FRAM SINE Alu 1 157 -19 501 243 237 17 chr18 15057342 15057519 -71620029 + MIR SINE MIR 37 252 -10 180 322 161 0 chr18 15057532 15057619 -71619929 - MIR SINE MIR -66 142 42 212 326 102 10 chr18 15058194 15058292 -71619256 + L2 LINE L2 3146 3252 -20 2054 112 17 0 chr18 15058292 15058588 -71618960 + AluSx SINE Alu 4 304 -8 1059 39 0 0 chr18 15058844 15058971 -71618577 - AluSp/q SINE Alu -9 304 178 3095 179 22 8 chr18 15059113 15059705 -71617843 + L1MB7 LINE L1 5559 6158 -26 2143 109 0 6 chr18 15061137 15061448 -71616100 + AluSq SINE Alu 1 309 -4 1794 110 40 0 chr18 15061606 15061879 -71615669 - AluSx SINE Alu -17 295 12 367 153 17 0 chr18 15061981 15062040 -71615508 - AluJ/FLAM SINE Alu -242 60 1 22 0 0 0 chr18 15062782 15062804 -71614744 + AT_rich Low_complexity Low_complexity 1 22 0 1649 148 37 30 chr18 15063147 15063445 -71614103 + AluJo SINE Alu 1 300 -12 274 296 31 0 chr18 15063778 15063876 -71613672 + L1ME2 LINE L1 6049 6149 -15 817 197 0 0 chr18 15064055 15064187 -71613361 + FLAM_A SINE Alu 1 132 -1 26 64 0 0 chr18 15064251 15064298 -71613250 + AT_rich Low_complexity Low_complexity 1 47 0 1679 171 3 7 chr18 15064574 15064861 -71612687 + AluJo SINE Alu 3 288 -24 2040 104 3 10 chr18 15064872 15065188 -71612360 + AluSp SINE Alu 1 314 0 447 280 95 5 chr18 15065234 15065423 -71612125 - MIR SINE MIR -4 258 53 190 320 53 13 chr18 15065466 15065541 -71612007 - L2 LINE L2 -9 3263 3186 1650 93 38 118 chr18 15065673 15065986 -71611562 - AluSg SINE Alu -22 288 1 4423 175 25 17 chr18 15066025 15066568 -71610980 + L1MB8 LINE L1 5186 5738 -440 1737 143 36 0 chr18 15066568 15066848 -71610700 + AluJb SINE Alu 1 290 -22 4423 175 25 17 chr18 15066848 15067240 -71610308 + L1MB8 LINE L1 5738 6126 -52 243 182 0 0 chr18 15067701 15067745 -71609803 - L1M4 LINE L1 -326 5848 5805 342 250 26 13 chr18 15067816 15067892 -71609656 + L2 LINE L2 3237 3313 0 1719 153 3 32 chr18 15067971 15068279 -71609269 + AluJo SINE Alu 1 299 -13 877 159 7 8 chr18 15068303 15068472 -71609076 + L1MB7 LINE L1 5678 5847 -337 1935 146 7 3 chr18 15069574 15069883 -71607665 - AluJb SINE Alu -2 310 1 1920 107 24 24 chr18 15070079 15070377 -71607171 + AluSx SINE Alu 1 298 -14 232 164 246 0 chr18 15070939 15071000 -71606548 - L1MC1 LINE L1 -13 6320 6245 282 56 0 0 chr18 15071011 15071047 -71606501 + (T)n Simple_repeat Simple_repeat 1 36 0 2188 88 0 26 chr18 15071284 15071589 -71605959 - AluSp SINE Alu -16 297 1 3359 130 37 2 chr18 15071623 15072131 -71605417 - MER1A DNA MER1_type -1 526 1 843 232 6 0 chr18 15072359 15072523 -71605025 + FRAM SINE Alu 1 165 -1 1872 111 0 90 chr18 15072525 15072868 -71604680 + AluSx SINE Alu 1 312 0 2250 91 3 0 chr18 15073002 15073298 -71604250 + AluSp SINE Alu 3 299 -14 2304 87 0 0 chr18 15073460 15073759 -71603789 + AluSq SINE Alu 1 299 -14 2085 103 7 0 chr18 15074141 15074472 -71603076 - AluSq SINE Alu 0 333 1 448 158 21 0 chr18 15075041 15075136 -71602412 + GA-rich Low_complexity Low_complexity 2 98 0 205 200 22 22 chr18 15075361 15075406 -71602142 - MIR SINE MIR -110 152 108 321 117 0 0 chr18 15075713 15075773 -71601775 + (TA)n Simple_repeat Simple_repeat 1 60 0 261 0 0 0 chr18 15075772 15075801 -71601747 + (CA)n Simple_repeat Simple_repeat 2 30 0 * 1099 157 5 26 chr18 15075803 15075994 -71601554 - AluJo SINE Alu -40 272 86 722 211 90 0 chr18 15076027 15076183 -71601365 - FRAM SINE Alu -6 170 1 232 163 58 0 chr18 15076278 15076364 -71601184 + (TA)n Simple_repeat Simple_repeat 1 91 0 354 282 218 40 chr18 15077275 15077601 -71599947 - L2 LINE L2 -846 2468 2085 188 283 43 130 chr18 15077709 15077757 -71599791 - L3 LINE CR1 -582 995 944 2051 136 0 0 chr18 15077757 15078067 -71599481 - AluSx SINE Alu -2 310 1 188 283 43 130 chr18 15078067 15078156 -71599392 - L3 LINE CR1 -633 944 870 850 254 30 0 chr18 15078247 15078448 -71599100 + MIR SINE MIR 56 262 0 2037 139 0 0 chr18 15078530 15078840 -71598708 + AluSx SINE Alu 1 310 -2 2264 84 0 7 chr18 15083126 15083425 -71594123 - AluSx SINE Alu -15 297 1 2181 106 3 0 chr18 15083801 15084102 -71593446 + AluSp SINE Alu 2 303 -10 1756 120 38 3 chr18 15084224 15084391 -71593157 - AluSx SINE Alu -11 301 118 201 39 0 0 chr18 15084391 15084417 -71593131 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1756 120 38 3 chr18 15084417 15084540 -71593008 - AluSx SINE Alu -194 118 1 224 196 0 18 chr18 15084706 15084762 -71592786 + CT-rich Low_complexity Low_complexity 5 59 0 997 200 0 0 chr18 15084772 15084947 -71592601 - FAM SINE Alu 0 175 1 1098 109 19 0 chr18 15085540 15085696 -71591852 - AluSc SINE Alu -20 289 131 285 29 0 0 chr18 15086501 15086535 -71591013 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1522 176 11 0 chr18 15086537 15086815 -71590733 - AluJo SINE Alu -31 281 1 469 251 0 22 chr18 15087666 15087849 -71589699 + (TG)n Simple_repeat Simple_repeat 2 180 0 227 241 35 0 chr18 15087986 15088044 -71589504 - MER5A DNA MER1_type -95 94 35 204 366 79 40 chr18 15088268 15088571 -71588977 + L2 LINE L2 2645 2959 -355 278 291 44 76 chr18 15088682 15088840 -71588708 + L2 LINE L2 3161 3313 0 442 275 136 34 chr18 15089183 15089563 -71587985 + MLT1J LTR MaLR 1 359 -87 185 253 58 35 chr18 15089728 15089815 -71587733 + L2 LINE L2 2979 3067 -205 1721 157 3 7 chr18 15090319 15090612 -71586936 - AluJb SINE Alu -20 292 1 265 270 101 0 chr18 15091499 15091588 -71585960 + MIR SINE MIR 117 214 -48 714 213 60 124 chr18 15092490 15092563 -71584985 + MLT2B2 LTR ERVL 1 77 -337 2067 112 7 0 chr18 15092563 15092858 -71584690 + AluSx SINE Alu 1 297 -15 714 213 60 124 chr18 15092858 15093132 -71584416 + MLT2B2 LTR ERVL 77 326 -88 534 256 72 6 chr18 15093709 15093889 -71583659 - MIR SINE MIR -15 247 56 228 259 93 19 chr18 15094308 15094416 -71583132 + L2 LINE L2 2965 3080 -192 268 262 20 74 chr18 15095422 15095571 -71581977 + HAL1 LINE L1 636 776 -1731 1133 149 50 30 chr18 15095673 15095874 -71581674 + AluJb SINE Alu 97 301 -11 945 261 122 21 chr18 15095874 15096299 -71581249 + L2 LINE L2 2319 2786 -528 2598 77 0 0 chr18 15096399 15096709 -71580839 + AluSq SINE Alu 1 310 -3 2488 53 0 0 chr18 15097838 15098163 -71579385 - AluSg SINE Alu 0 325 1 1242 144 34 24 chr18 15098167 15098375 -71579173 - AluSc SINE Alu -16 293 84 692 211 90 0 chr18 15098408 15098564 -71578984 - FRAM SINE Alu -6 170 1 232 163 58 0 chr18 15098659 15098745 -71578803 + (TA)n Simple_repeat Simple_repeat 1 91 0 2481 88 0 0 chr18 15099228 15099536 -71578012 - AluSg1 SINE Alu -1 308 1 1326 181 113 4 chr18 15099541 15099807 -71577741 - AluJo SINE Alu -17 295 1 2116 123 0 49 chr18 15099878 15100186 -71577362 + AluSx SINE Alu 1 293 -19 21 57 0 19 chr18 15100224 15100262 -71577286 + AT_rich Low_complexity Low_complexity 1 39 -13 659 190 41 0 chr18 15100262 15100383 -71577165 + FLAM_C SINE Alu 1 126 -7 21 57 0 19 chr18 15100383 15100397 -71577151 + AT_rich Low_complexity Low_complexity 39 52 0 21 0 0 0 chr18 15100442 15100463 -71577085 + AT_rich Low_complexity Low_complexity 1 21 0 2319 106 0 0 chr18 15100541 15100842 -71576706 + AluSq SINE Alu 1 301 -12 2386 95 0 19 chr18 15100851 15101166 -71576382 + AluSq SINE Alu 1 309 -4 2539 71 0 0 chr18 15101175 15101486 -71576062 + AluY SINE Alu 1 311 0 305 283 75 0 chr18 15101901 15102007 -71575541 - L3b LINE CR1 -202 1381 1268 687 138 0 113 chr18 15102051 15102210 -71575338 - AluJb SINE Alu -170 142 2 2094 120 7 0 chr18 15102700 15102992 -71574556 + AluSg SINE Alu 1 294 -16 1458 133 39 192 chr18 15103131 15103431 -71574117 + MLT1B LTR MaLR 3 347 -43 2277 130 24 0 chr18 15103431 15103809 -71573739 - L1PA16 LINE L1 -4 6162 5776 1658 173 39 29 chr18 15103809 15104115 -71573433 - AluJb SINE Alu 0 312 4 1458 133 39 192 chr18 15104115 15104271 -71573277 + MLT1B LTR MaLR 345 390 0 2469 60 3 35 chr18 15105000 15105316 -71572232 - AluY SINE Alu -5 306 1 423 262 81 7 chr18 15105630 15105779 -71571769 - L3 LINE CR1 -77 1500 1341 1136 104 13 0 chr18 15105779 15105933 -71571615 - AluY SINE Alu -21 290 135 476 254 30 30 chr18 15106012 15106177 -71571371 - MER69A DNA AcHobo -3 174 10 1198 129 0 11 chr18 15106335 15106513 -71571035 + AluSp SINE Alu 136 311 -2 767 106 97 2 chr18 15106514 15106724 -71570824 - MER51B LTR ERV1 -112 265 1 321 298 149 21 chr18 15106773 15107008 -71570540 - L3 LINE CR1 -696 881 617 297 223 53 21 chr18 15107071 15107165 -71570383 - MER76 LTR ERV -275 413 317 687 126 27 0 chr18 15107173 15107284 -71570264 + AluSg SINE Alu 5 118 -192 2256 125 0 0 chr18 15107310 15107606 -71569942 + AluSx SINE Alu 1 296 -16 206 75 25 25 chr18 15107606 15107646 -71569902 + (TA)n Simple_repeat Simple_repeat 1 40 0 647 199 20 109 chr18 15107685 15107884 -71569664 - MER76 LTR ERV -447 241 61 2924 162 33 13 chr18 15107884 15108428 -71569120 + LTR10A LTR ERV1 1 555 -54 380 143 16 0 chr18 15108440 15108503 -71569045 - MER76 LTR ERV -624 64 1 553 246 28 7 chr18 15108522 15108664 -71568884 - MER20 DNA MER1_type 0 219 75 239 227 0 0 chr18 15109030 15109074 -71568474 - tRNA-Ala-GCG tRNA tRNA -29 46 3 23 54 0 0 chr18 15109479 15109516 -71568032 + AT_rich Low_complexity Low_complexity 1 37 0 31 26 0 0 chr18 15109642 15109680 -71567868 + AT_rich Low_complexity Low_complexity 1 38 0 194 137 41 27 chr18 15109687 15109760 -71567788 + (TATAA)n Simple_repeat Simple_repeat 1 74 0 381 287 127 7 chr18 15110261 15110411 -71567137 - MLT1A1 LTR MaLR -2 363 196 202 291 0 0 chr18 15111433 15111488 -71566060 - MIR SINE MIR -108 154 100 365 306 57 13 chr18 15111896 15112053 -71565495 + MIR SINE MIR 99 262 0 27 0 0 0 chr18 15112353 15112380 -71565168 + AT_rich Low_complexity Low_complexity 1 27 0 288 0 0 0 chr18 15112387 15112419 -71565129 + (TG)n Simple_repeat Simple_repeat 1 32 0 * 297 0 0 0 chr18 15112418 15112451 -71565097 + (GA)n Simple_repeat Simple_repeat 1 33 0 250 193 8 160 chr18 15113266 15113385 -71564163 + AluJ/FLAM SINE Alu 1 101 -201 1583 165 110 32 chr18 15115280 15115354 -71562194 - MER69 DNA AcHobo -2 2524 2457 1861 137 29 29 chr18 15115354 15115481 -71562067 + AluSq SINE Alu 2 128 -185 2687 46 0 3 chr18 15115481 15115788 -71561760 + AluY SINE Alu 1 306 -5 1861 137 29 29 chr18 15115788 15115967 -71561581 + AluSq SINE Alu 127 308 -5 1583 165 110 32 chr18 15115967 15116366 -71561182 - MER69 DNA AcHobo -69 2457 2014 1248 265 152 20 chr18 15116374 15116868 -71560680 - MER69 DNA AcHobo -1967 559 1 254 267 84 46 chr18 15117678 15117809 -71559739 - HAL1 LINE L1 -370 2137 2002 598 217 70 0 chr18 15117888 15118045 -71559503 - MER5A DNA MER1_type 0 189 22 1811 131 0 26 chr18 15118111 15118416 -71559132 - AluSx SINE Alu -2 310 14 2003 122 14 7 chr18 15118694 15119022 -71558526 - AluJo SINE Alu 0 330 1 1851 123 33 63 chr18 15119546 15119713 -71557835 - AluSx SINE Alu -18 294 138 2332 96 0 3 chr18 15119713 15120014 -71557534 - AluSx SINE Alu -12 300 1 1851 123 33 63 chr18 15120014 15120147 -71557401 - AluSx SINE Alu -174 138 3 577 231 0 0 chr18 15120182 15120341 -71557207 + FLAM_A SINE Alu 1 159 0 2942 10 0 0 chr18 15120545 15120856 -71556692 + AluYa5 SINE Alu 1 311 0 278 145 226 0 chr18 15120868 15120930 -71556618 + L1MC1 LINE L1 6245 6320 -13 1787 117 38 45 chr18 15121493 15121656 -71555892 - AluSx SINE Alu -14 298 136 2247 109 7 3 chr18 15121656 15121958 -71555590 - AluSq SINE Alu -10 303 1 1787 117 38 45 chr18 15121958 15122084 -71555464 - AluSx SINE Alu -176 136 11 2327 100 3 3 chr18 15122358 15122658 -71554890 + AluSc SINE Alu 1 300 -9 2313 66 40 23 chr18 15122658 15122959 -71554589 + AluY SINE Alu 1 306 -5 1458 133 39 192 chr18 15123687 15123843 -71553705 - MLT1B LTR MaLR 0 390 212 1658 173 39 29 chr18 15123843 15124149 -71553399 + AluJb SINE Alu 4 312 0 2335 127 21 0 chr18 15124149 15124528 -71553020 + L1PA16 LINE L1 5776 6162 -4 1458 133 39 192 chr18 15124528 15124828 -71552720 - MLT1B LTR MaLR -176 214 3 1916 140 7 3 chr18 15124967 15125260 -71552288 - AluSg SINE Alu -16 294 1 687 138 0 113 chr18 15125750 15125909 -71551639 + AluJb SINE Alu 2 142 -170 305 283 75 0 chr18 15125953 15126059 -71551489 + L3b LINE CR1 1268 1381 -202 2516 67 0 3 chr18 15126474 15126786 -71550762 - AluY SINE Alu 0 311 1 2486 61 7 3 chr18 15126817 15127127 -71550421 - AluY SINE Alu 0 311 1 1023 106 0 0 chr18 15127129 15127261 -71550287 - AluY SINE Alu -179 132 1 2234 102 3 3 chr18 15127263 15127557 -71549991 - AluSx SINE Alu -18 294 1 232 300 0 17 chr18 15127558 15127618 -71549930 - L2 LINE L2 -12 3301 3243 335 303 21 41 chr18 15127712 15127857 -71549691 - MIR SINE MIR -119 143 2 2517 70 0 0 chr18 15128173 15128475 -71549073 - AluSc SINE Alu -7 302 1 411 209 0 87 chr18 15129838 15130081 -71547467 + (CGGGG)n Simple_repeat Simple_repeat 1 221 0 2470 74 7 0 chr18 15131120 15131418 -71546130 + AluSq SINE Alu 1 300 -13 1553 167 110 32 chr18 15133092 15133166 -71544382 - MER69 DNA AcHobo -2 2524 2457 1960 132 29 26 chr18 15133166 15133293 -71544255 + AluSp SINE Alu 2 127 -186 2704 45 0 3 chr18 15133293 15133602 -71543946 + AluY SINE Alu 1 308 -3 1960 132 29 26 chr18 15133602 15133784 -71543764 + AluSp SINE Alu 127 312 -1 1553 167 110 32 chr18 15133784 15134183 -71543365 - MER69 DNA AcHobo -69 2457 2014 1248 265 152 20 chr18 15134191 15134685 -71542863 - MER69 DNA AcHobo -1967 559 1 254 267 84 46 chr18 15135495 15135626 -71541922 - HAL1 LINE L1 -370 2137 2002 598 217 70 0 chr18 15135705 15135862 -71541686 - MER5A DNA MER1_type 0 189 22 1340 255 73 23 chr18 15135881 15135928 -71541620 - L1ME LINE L1 -360 5810 5767 2252 129 0 0 chr18 15135928 15136238 -71541310 - AluSx SINE Alu -2 310 1 1340 255 73 23 chr18 15136238 15136609 -71540939 - L1ME LINE L1 -403 5767 5367 2586 75 0 0 chr18 15136609 15136914 -71540634 - AluSx SINE Alu -7 305 1 1340 255 73 23 chr18 15136914 15136933 -71540615 - L1ME LINE L1 -803 5367 5350 945 261 122 21 chr18 15137014 15137439 -71540109 - L2 LINE L2 -528 2786 2319 1133 149 50 30 chr18 15137439 15137640 -71539908 - AluJb SINE Alu -11 301 97 268 262 20 74 chr18 15137742 15137891 -71539657 - HAL1 LINE L1 -1731 776 636 228 259 93 19 chr18 15138897 15139005 -71538543 - L2 LINE L2 -192 3080 2965 534 256 72 6 chr18 15139424 15139604 -71537944 + MIR SINE MIR 56 247 -15 731 204 58 121 chr18 15140181 15140455 -71537093 - MLT2D LTR ERVL -88 326 77 2223 112 7 0 chr18 15140455 15140750 -71536798 - AluSx SINE Alu -15 297 1 731 204 58 121 chr18 15140750 15140823 -71536725 - MLT2D LTR ERVL -337 77 1 251 270 101 0 chr18 15141725 15141814 -71535734 - MIR SINE MIR -48 214 117 1881 161 3 7 chr18 15142701 15143000 -71534548 + AluJb SINE Alu 1 298 -14 190 253 58 35 chr18 15143498 15143585 -71533963 - L2 LINE L2 -205 3067 2979 449 275 136 34 chr18 15143750 15144130 -71533418 - MLT1J LTR MaLR -87 395 1 284 291 44 76 chr18 15144473 15144631 -71532917 - L2 LINE L2 0 3313 3161 227 366 79 40 chr18 15144742 15145045 -71532503 - L2 LINE L2 -355 2959 2645 231 241 35 0 chr18 15145269 15145327 -71532221 + MER5A DNA MER1_type 35 94 -95 393 245 20 7 chr18 15145433 15145584 -71531964 + (CA)n Simple_repeat Simple_repeat 1 153 0 207 125 0 0 chr18 15145608 15145648 -71531900 + (CA)n Simple_repeat Simple_repeat 2 41 0 1655 176 11 0 chr18 15146494 15146808 -71530740 + AluJo SINE Alu 1 317 0 24 0 0 0 chr18 15147527 15147551 -71529997 + GC_rich Low_complexity Low_complexity 1 24 0 1041 150 16 16 chr18 15148756 15148949 -71528599 - AluJo SINE Alu 0 312 120 2581 60 0 0 chr18 15149215 15149514 -71528034 - AluY SINE Alu -12 299 1 2219 98 3 0 chr18 15149559 15149846 -71527702 + AluSg SINE Alu 11 298 -12 1778 160 42 7 chr18 15151095 15151382 -71526166 + AluJb SINE Alu 5 301 -11 335 161 0 0 chr18 15151382 15151438 -71526110 + L1M2 LINE L1 5509 5564 -727 369 113 5 5 chr18 15151439 15151509 -71526039 + Alu SINE Alu 241 298 -4 2473 84 0 6 chr18 15151511 15151822 -71525726 + AluSq SINE Alu 1 309 -4 268 250 92 58 chr18 15151827 15151947 -71525601 + MIR3 SINE MIR 67 190 -18 2160 142 0 16 chr18 15151964 15152281 -71525267 + AluSx SINE Alu 1 312 0 2271 97 21 0 chr18 15153135 15153425 -71524123 - AluSx SINE Alu -16 296 1 1184 144 0 0 chr18 15153936 15154103 -71523445 + FRAM SINE Alu 1 164 -12 2263 87 3 3 chr18 15155450 15155739 -71521809 + AluSg SINE Alu 1 289 -21 489 245 115 0 chr18 15155836 15155975 -71521573 + MER3 DNA MER1_type 42 196 -13 979 56 28 33 chr18 15156155 15156335 -71521213 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 202 94 0 31 chr18 15156335 15156367 -71521181 + (TTCC)n Simple_repeat Simple_repeat 1 31 0 1264 144 0 0 chr18 15156367 15156554 -71520994 - AluSp SINE Alu -2 311 125 2166 80 15 101 chr18 15156554 15156891 -71520657 - AluSq SINE Alu 0 313 6 198 270 145 72 chr18 15157251 15157403 -71520145 - L2 LINE L2 -822 2492 2330 1157 198 14 0 chr18 15157685 15157897 -71519651 + AluJo SINE Alu 90 304 -8 192 273 106 0 chr18 15157977 15158043 -71519505 - L2 LINE L2 -1036 2278 2206 574 252 59 71 chr18 15164954 15165026 -71512522 + MIR SINE MIR 1 72 -190 2314 96 24 0 chr18 15165026 15165319 -71512229 - AluSx SINE Alu -12 300 1 574 252 59 71 chr18 15165319 15165484 -71512064 + MIR SINE MIR 72 235 -27 198 103 0 0 chr18 15165611 15165640 -71511908 + (TC)n Simple_repeat Simple_repeat 2 30 0 334 210 78 60 chr18 15165900 15166067 -71511481 - L1MC5 LINE L1 -189 7772 7603 302 324 48 9 chr18 15166068 15166173 -71511375 - L1MC5 LINE L1 -1228 6733 6625 2089 144 0 10 chr18 15166180 15166492 -71511056 - AluSx SINE Alu -3 309 1 2422 97 3 0 chr18 15166532 15166841 -71510707 - AluSq SINE Alu -3 310 1 2675 183 45 36 chr18 15167173 15167421 -71510127 - Charlie1 DNA MER1_type -112 2649 2405 1715 168 16 10 chr18 15167421 15167725 -71509823 - AluJo SINE Alu -6 306 1 2675 183 45 36 chr18 15167725 15167859 -71509689 - Charlie1 DNA MER1_type -356 2405 2274 2009 129 3 45 chr18 15167859 15168168 -71509380 - AluSx SINE Alu -16 296 1 2675 183 45 36 chr18 15168168 15168473 -71509075 - Charlie1 DNA MER1_type -487 2274 1955 2043 135 18 0 chr18 15168491 15168773 -71508775 - AluSx SINE Alu -25 287 1 300 27 0 0 chr18 15168776 15168813 -71508735 + (ATTG)n Simple_repeat Simple_repeat 4 40 0 2149 115 4 0 chr18 15168814 15169093 -71508455 - AluSp SINE Alu -33 280 1 342 314 66 87 chr18 15169097 15169524 -71508024 - HAL1 LINE L1 -1187 1320 903 1600 175 28 11 chr18 15169710 15169995 -71507553 + AluJo SINE Alu 1 290 -22 1744 162 40 3 chr18 15170119 15170415 -71507133 - AluSx SINE Alu -5 307 1 353 262 43 59 chr18 15170619 15170806 -71506742 - L1MB5 LINE L1 0 6174 5991 2222 73 42 14 chr18 15170847 15171135 -71506413 + AluSx SINE Alu 1 296 -16 1663 209 17 17 chr18 15171754 15171789 -71505759 - MLT1A1 LTR MaLR -10 355 321 2713 155 7 2 chr18 15171789 15172215 -71505333 + MSTA LTR MaLR 1 428 0 1663 209 17 17 chr18 15172215 15172534 -71505014 - MLT1A1 LTR MaLR -43 322 1 1933 119 58 0 chr18 15172611 15172889 -71504659 + AluSx SINE Alu 1 294 -18 437 263 26 40 chr18 15173182 15173334 -71504214 - MIR SINE MIR -65 197 48 2361 93 0 3 chr18 15173586 15173886 -71503662 + AluSx SINE Alu 1 299 -13 233 190 139 0 chr18 15173887 15173966 -71503582 - L1MC4 LINE L1 -58 7984 7895 433 148 0 0 chr18 15174582 15174643 -71502905 + AluS SINE Alu 2 62 -256 1804 136 7 15 chr18 15175070 15175343 -71502205 - AluJo SINE Alu -41 271 1 181 258 113 16 chr18 15175355 15175417 -71502131 - L2 LINE L2 -1 3271 3204 1289 27 0 0 chr18 15175434 15175582 -71501966 + L1PA5 LINE L1 5995 6142 -12 28 0 0 0 chr18 15175582 15175610 -71501938 + AT_rich Low_complexity Low_complexity 1 28 0 900 169 26 18 chr18 15175853 15176169 -71501379 - MLT1B LTR MaLR 0 390 1 339 234 200 69 chr18 15176390 15176447 -71501101 - MER3 DNA MER1_type 0 209 161 2504 66 0 0 chr18 15176447 15176749 -71500799 + AluSg SINE Alu 1 302 -8 339 234 200 69 chr18 15176749 15176761 -71500787 - MER3 DNA MER1_type -48 161 152 2290 105 0 19 chr18 15176761 15177075 -71500473 + AluSx SINE Alu 5 312 0 339 234 200 69 chr18 15177075 15177179 -71500369 - MER3 DNA MER1_type -57 152 12 2272 101 3 0 chr18 15178877 15179175 -71498373 + AluSg SINE Alu 1 299 -11 2241 100 20 13 chr18 15180163 15180464 -71497084 - AluSx SINE Alu -9 303 1 228 172 75 0 chr18 15182527 15182620 -71494928 + (TA)n Simple_repeat Simple_repeat 1 100 0 380 247 73 33 chr18 15183797 15183947 -71493601 + MIR SINE MIR 106 261 -1 602 266 97 52 chr18 15185316 15185564 -71491984 + MIR SINE MIR 2 260 -2 277 204 0 0 chr18 15185656 15185705 -71491843 - L2 LINE L2 0 3313 3265 2169 97 3 36 chr18 15186038 15186346 -71491202 - AluSc SINE Alu -11 298 1 2363 75 3 0 chr18 15186422 15186716 -71490832 - AluY SINE Alu -16 295 1 2393 86 0 22 chr18 15186725 15187038 -71490510 - AluSq SINE Alu -7 306 1 2338 103 0 0 chr18 15187047 15187349 -71490199 - AluSq SINE Alu -11 302 1 21 0 0 0 chr18 15187427 15187448 -71490100 + AT_rich Low_complexity Low_complexity 1 21 0 710 190 41 0 chr18 15187507 15187628 -71489920 - FLAM_C SINE Alu -7 126 1 2112 123 0 49 chr18 15187704 15188012 -71489536 - AluSx SINE Alu -19 293 1 1321 181 113 4 chr18 15188083 15188349 -71489199 + AluJo SINE Alu 1 295 -17 2457 91 0 0 chr18 15188354 15188662 -71488886 + AluSg1 SINE Alu 1 308 -1 408 261 23 0 chr18 15188696 15188784 -71488764 + L1MC4 LINE L1 6614 6703 -1339 2536 64 0 0 chr18 15188787 15189083 -71488465 - AluY SINE Alu -15 296 1 381 43 0 0 chr18 15189707 15189754 -71487794 + (TG)n Simple_repeat Simple_repeat 2 48 0 263 167 0 0 chr18 15189866 15189908 -71487640 + Alu SINE Alu 1 42 -259 230 250 0 15 chr18 15189910 15189978 -71487570 + (TGAA)n Simple_repeat Simple_repeat 1 67 0 1528 156 13 70 chr18 15190206 15190399 -71487149 - AluJb SINE Alu -3 309 139 2218 115 0 7 chr18 15190399 15190703 -71486845 + AluSq SINE Alu 1 302 -11 1528 156 13 70 chr18 15190703 15190824 -71486724 - AluJb SINE Alu -173 139 13 2268 96 20 10 chr18 15191917 15192218 -71485330 - AluSx SINE Alu -8 304 1 228 172 75 0 chr18 15194282 15194375 -71483173 + (TA)n Simple_repeat Simple_repeat 1 100 0 380 247 73 33 chr18 15195553 15195703 -71481845 + MIR SINE MIR 106 261 -1 602 266 97 52 chr18 15197072 15197320 -71480228 + MIR SINE MIR 2 260 -2 277 204 0 0 chr18 15197412 15197461 -71480087 - L2 LINE L2 0 3313 3265 2169 97 3 36 chr18 15197794 15198102 -71479446 - AluSc SINE Alu -11 298 1 2586 51 0 0 chr18 15198178 15198471 -71479077 - AluY SINE Alu -18 293 1 2155 139 0 3 chr18 15198530 15198839 -71478709 - AluSx SINE Alu -4 308 1 2192 119 3 3 chr18 15199421 15199724 -71477824 + AluSx SINE Alu 1 303 -9 212 140 0 40 chr18 15199987 15200037 -71477511 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1450 156 80 0 chr18 15200048 15200286 -71477262 - AluJb SINE Alu -12 300 44 2161 118 3 34 chr18 15200287 15200609 -71476939 + AluSx SINE Alu 1 312 0 1855 122 33 63 chr18 15200617 15200752 -71476796 + AluSx SINE Alu 1 138 -174 2307 100 0 3 chr18 15200752 15201053 -71476495 + AluSx SINE Alu 1 300 -12 1855 122 33 63 chr18 15201053 15201220 -71476328 + AluSx SINE Alu 138 294 -18 1992 122 14 7 chr18 15201744 15202072 -71475476 + AluJo SINE Alu 1 330 0 2514 62 7 13 chr18 15202295 15202602 -71474946 + AluSp SINE Alu 1 305 -8 579 106 0 75 chr18 15202618 15202712 -71474836 + AluJ/FLAM SINE Alu 2 88 -224 1690 138 12 0 chr18 15202847 15203094 -71474454 + AluSx SINE Alu 54 303 -9 2165 99 32 0 chr18 15203099 15203383 -71474165 + AluSc SINE Alu 2 294 -15 2457 57 0 0 chr18 15203387 15203712 -71473836 + AluSg SINE Alu 1 325 0 2525 74 0 3 chr18 15204841 15205152 -71472396 - AluSq SINE Alu -3 310 1 234 91 0 0 chr18 15205187 15205220 -71472328 + (TG)n Simple_repeat Simple_repeat 1 33 0 289 231 22 15 chr18 15205248 15205382 -71472166 + CT-rich Low_complexity Low_complexity 2 136 0 1022 200 0 0 chr18 15205382 15205557 -71471991 - FAM SINE Alu 0 175 1 1296 100 18 0 chr18 15206150 15206320 -71471228 - AluSc SINE Alu -6 303 131 2448 84 0 3 chr18 15206544 15206854 -71470694 - AluSc SINE Alu 0 309 1 26 50 0 0 chr18 15207109 15207149 -71470399 + AT_rich Low_complexity Low_complexity 1 40 0 2231 105 3 10 chr18 15207212 15207244 -71470304 - AluY SINE Alu 0 311 280 341 22 22 0 chr18 15207244 15207290 -71470258 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2231 105 3 10 chr18 15207290 15207562 -71469986 - AluY SINE Alu -31 280 9 643 93 9 9 chr18 15207570 15207672 -71469876 + (TTCC)n Simple_repeat Simple_repeat 2 104 0 2257 82 3 3 chr18 15207672 15207954 -71469594 - AluSq SINE Alu -31 282 1 2538 63 0 0 chr18 15208195 15208498 -71469050 + AluY SINE Alu 1 303 -8 1593 168 33 15 chr18 15208500 15208774 -71468774 + AluJb SINE Alu 1 279 -33 378 0 0 0 chr18 15208774 15208816 -71468732 + (CA)n Simple_repeat Simple_repeat 1 42 0 2322 115 0 6 chr18 15208879 15209191 -71468357 + AluSx SINE Alu 1 310 -2 308 254 0 14 chr18 15209261 15209332 -71468216 + MIR SINE MIR 55 124 -138 1699 189 0 7 chr18 15209367 15209682 -71467866 + AluJo SINE Alu 1 313 0 808 204 72 136 chr18 15209719 15210234 -71467314 + MLT1F LTR MaLR 1 482 -60 2381 99 0 3 chr18 15210306 15210610 -71466938 - AluSg SINE Alu -7 303 1 315 194 14 0 chr18 15210690 15210762 -71466786 + HsTC2 DNA Tc2 1823 1895 -3 3442 173 67 85 chr18 15210972 15211055 -71466493 + MER21A LTR ERV1 13 96 -835 2196 123 0 0 chr18 15211055 15211362 -71466186 - AluSx SINE Alu 0 307 1 3442 173 67 85 chr18 15211362 15212187 -71465361 + MER21A LTR ERV1 96 906 -25 1159 149 6 0 chr18 15212518 15212693 -71464855 + AluJb SINE Alu 134 309 -3 2167 104 7 7 chr18 15212860 15213140 -71464408 - AluSx SINE Alu -32 280 1 2349 94 3 3 chr18 15213298 15213595 -71463953 + AluSx SINE Alu 1 297 -15 2452 77 3 0 chr18 15213807 15214105 -71463443 + AluSx SINE Alu 2 300 -12 2286 92 3 7 chr18 15214282 15214587 -71462961 - AluSp SINE Alu -9 304 1 366 224 26 49 chr18 15214677 15214791 -71462757 + MLT1D LTR MaLR 1 99 -406 1818 234 108 64 chr18 15214809 15215514 -71462034 + MER21B LTR ERV1 19 754 -109 2418 92 0 3 chr18 15215560 15215863 -71461685 - AluSq SINE Alu -11 302 1 1106 232 79 30 chr18 15215883 15216223 -71461325 + MLT1D LTR MaLR 136 470 -35 730 191 0 0 chr18 15216241 15216377 -71461171 - FRAM SINE Alu -4 172 37 3380 101 21 0 chr18 15216494 15216969 -71460579 + LTR19A LTR ERV1 1 485 -1 2320 71 0 7 chr18 15216969 15217252 -71460296 - AluSx SINE Alu -31 281 1 2530 68 3 0 chr18 15217703 15217997 -71459551 + AluSp SINE Alu 1 295 -18 2213 90 7 20 chr18 15218660 15218959 -71458589 + AluSx SINE Alu 5 299 -13 359 94 0 0 chr18 15219824 15219877 -71457671 - FRAM/FAM SINE Alu -86 80 28 2372 93 0 7 chr18 15221761 15222062 -71455486 - AluSx SINE Alu -13 299 1 1360 251 48 43 chr18 15222456 15222994 -71454554 - MER34 LTR ERV1 0 542 2 377 203 169 8 chr18 15223445 15223563 -71453985 - L2 LINE L2 -5 3308 3172 303 28 0 0 chr18 15223978 15224014 -71453534 + (CA)n Simple_repeat Simple_repeat 1 36 0 2295 114 0 0 chr18 15224905 15225202 -71452346 - AluSx SINE Alu -15 297 1 2266 100 7 23 chr18 15226106 15226415 -71451133 - AluSx SINE Alu -8 304 1 1840 168 0 19 chr18 15227489 15227799 -71449749 + AluJo SINE Alu 1 304 -8 216 180 0 82 chr18 15228986 15229047 -71448501 - MIR SINE MIR -76 132 77 2070 126 0 23 chr18 15229420 15229556 -71447992 + AluSq SINE Alu 1 139 -174 2389 84 19 0 chr18 15229556 15229864 -71447684 + AluYb8 SINE Alu 1 314 -4 2379 110 0 0 chr18 15229866 15230174 -71447374 + AluSq SINE Alu 1 308 -5 2070 126 0 23 chr18 15230174 15230336 -71447212 + AluSq SINE Alu 140 295 -18 1822 157 21 0 chr18 15230754 15231034 -71446514 + AluJb SINE Alu 1 286 -26 195 146 0 0 chr18 15231034 15231075 -71446473 + (CA)n Simple_repeat Simple_repeat 1 41 0 2533 74 0 0 chr18 15231157 15231466 -71446082 - AluY SINE Alu -2 309 1 1368 205 30 21 chr18 15231549 15231663 -71445885 - MER2 DNA MER2_type -3 341 230 1909 131 13 48 chr18 15231663 15231977 -71445571 + AluJb SINE Alu 10 312 0 1368 205 30 21 chr18 15231977 15232199 -71445349 - MER2 DNA MER2_type -114 230 2 2399 90 0 0 chr18 15232262 15232562 -71444986 + AluSx SINE Alu 1 300 -12 237 65 0 0 chr18 15232614 15232645 -71444903 + MIR3 SINE MIR 154 184 -24 2370 102 0 0 chr18 15233267 15233572 -71443976 - AluSg SINE Alu -5 305 1 1403 165 0 4 chr18 15233873 15234110 -71443438 - MER46A DNA MER2_type 0 236 1 261 284 136 39 chr18 15234766 15234921 -71442627 - MIR SINE MIR -70 192 23 424 233 78 0 chr18 15234989 15235092 -71442456 + MER81 DNA DNA 2 112 -2 232 351 30 0 chr18 15236329 15236463 -71441085 + L1MB8 LINE L1 5802 5939 -239 1430 71 0 0 chr18 15236466 15236635 -71440913 + AluSg/x SINE Alu 131 299 -13 346 130 0 0 chr18 15236635 15236689 -71440859 + Alu SINE Alu 246 299 -3 1663 209 17 17 chr18 15237363 15237398 -71440150 - MLT1A1 LTR MaLR -10 355 321 2749 150 7 2 chr18 15237398 15237824 -71439724 + MSTA LTR MaLR 1 428 0 1663 209 17 17 chr18 15237824 15238143 -71439405 - MLT1A1 LTR MaLR -43 322 1 1910 122 58 0 chr18 15238220 15238498 -71439050 + AluSx SINE Alu 1 294 -18 437 263 26 40 chr18 15238791 15238943 -71438605 - MIR SINE MIR -65 197 48 324 212 15 109 chr18 15239130 15239195 -71438353 - L1MC4 LINE L1 -6 8036 7989 2376 90 0 3 chr18 15239195 15239495 -71438053 + AluSx SINE Alu 1 299 -13 324 212 15 109 chr18 15239495 15239566 -71437982 - L1MC4 LINE L1 -53 7989 7913 1815 181 3 3 chr18 15240192 15240495 -71437053 + AluJo SINE Alu 1 303 -9 1940 145 7 13 chr18 15240588 15240891 -71436657 - AluJo SINE Alu -11 301 1 181 258 113 16 chr18 15240903 15240965 -71436583 - L2 LINE L2 -1 3271 3204 1259 46 0 0 chr18 15240982 15241133 -71436415 + L1PA5 LINE L1 5995 6145 -9 30 0 0 0 chr18 15241133 15241163 -71436385 + AT_rich Low_complexity Low_complexity 1 30 0 900 166 26 18 chr18 15241406 15241722 -71435826 - MLT1B LTR MaLR 0 390 1 2519 63 0 0 chr18 15242000 15242302 -71435246 + AluSg SINE Alu 1 302 -8 2274 108 0 19 chr18 15242314 15242628 -71434920 + AluSx SINE Alu 5 312 0 281 242 16 0 chr18 15242670 15242732 -71434816 - MER3 DNA MER1_type -135 74 12 2285 100 3 0 chr18 15244429 15244728 -71432820 + AluSg SINE Alu 1 300 -10 2268 96 20 10 chr18 15245713 15246014 -71431534 - AluSx SINE Alu -8 304 1 228 172 75 0 chr18 15248077 15248170 -71429378 + (TA)n Simple_repeat Simple_repeat 1 100 0 380 247 73 33 chr18 15249346 15249496 -71428052 + MIR SINE MIR 106 261 -1 602 266 97 52 chr18 15250865 15251113 -71426435 + MIR SINE MIR 2 260 -2 277 204 0 0 chr18 15251205 15251254 -71426294 - L2 LINE L2 0 3313 3265 2169 97 3 36 chr18 15251587 15251895 -71425653 - AluSc SINE Alu -11 298 1 2596 51 0 0 chr18 15251971 15252265 -71425283 - AluY SINE Alu -17 294 1 2155 139 0 3 chr18 15252324 15252633 -71424915 - AluSx SINE Alu -4 308 1 2192 119 3 3 chr18 15253215 15253518 -71424030 + AluSx SINE Alu 1 303 -9 212 140 0 40 chr18 15253781 15253831 -71423717 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1450 156 80 0 chr18 15253842 15254080 -71423468 - AluJb SINE Alu -12 300 44 2116 124 3 37 chr18 15254081 15254404 -71423144 + AluSx SINE Alu 1 312 0 2221 90 13 17 chr18 15254411 15254711 -71422837 + AluSp SINE Alu 1 299 -14 262 163 0 0 chr18 15254711 15254754 -71422794 - AluJb SINE Alu -242 60 18 1001 148 68 12 chr18 15256171 15256333 -71421215 - AluJo SINE Alu -138 174 4 647 181 17 0 chr18 15256373 15256489 -71421059 + MLT1B LTR MaLR 273 390 0 2545 72 0 0 chr18 15257232 15257539 -71420009 - AluY SINE Alu -4 307 1 2155 139 0 3 chr18 15257598 15257907 -71419641 - AluSx SINE Alu -4 308 1 2192 119 3 3 chr18 15258490 15258793 -71418755 + AluSx SINE Alu 1 303 -9 212 140 0 40 chr18 15259056 15259106 -71418442 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1531 156 58 0 chr18 15259117 15259360 -71418188 - AluJb SINE Alu -12 300 44 2161 118 3 34 chr18 15259361 15259683 -71417865 + AluSx SINE Alu 1 312 0 1845 123 13 26 chr18 15259691 15259993 -71417555 + AluSp SINE Alu 1 298 -15 262 163 0 0 chr18 15259993 15260036 -71417512 - AluJb SINE Alu -242 60 18 2186 120 0 19 chr18 15261452 15261761 -71415787 + AluSg SINE Alu 1 303 -7 342 0 0 0 chr18 15261861 15261899 -71415649 + (GAAA)n Simple_repeat Simple_repeat 4 41 0 2358 175 106 58 chr18 15261899 15262005 -71415543 - LTR8A LTR ERV1 -43 684 584 1887 88 69 110 chr18 15262005 15262324 -71415224 - AluSg SINE Alu 0 310 5 2358 175 106 58 chr18 15262324 15262870 -71414678 - LTR8A LTR ERV1 -143 584 1 234 0 0 0 chr18 15262911 15262937 -71414611 + (TTA)n Simple_repeat Simple_repeat 3 28 0 1623 153 7 43 chr18 15262940 15263222 -71414326 - AluJb SINE Alu -23 289 18 4233 87 0 19 chr18 15263231 15263672 -71413876 + MER41A LTR ERV1 1 430 -124 2708 48 0 0 chr18 15263672 15263982 -71413566 - AluY SINE Alu -1 310 1 4233 87 0 19 chr18 15263982 15264105 -71413443 + MER41A LTR ERV1 430 554 0 450 225 56 21 chr18 15264123 15264265 -71413283 + L1ME3A LINE L1 5230 5376 -770 1202 125 6 6 chr18 15264288 15264464 -71413084 - AluSq SINE Alu -13 300 125 2149 115 14 3 chr18 15264522 15264818 -71412730 + AluSq SINE Alu 1 299 -14 961 109 7 15 chr18 15264834 15264971 -71412577 + AluJo SINE Alu 1 136 -176 618 205 23 2 chr18 15264992 15265136 -71412412 + MLT1F1 LTR MaLR 1 144 -411 644 188 192 20 chr18 15265149 15265256 -71412292 + MLT1F1 LTR MaLR 248 335 -232 3784 186 135 6 chr18 15265256 15265987 -71411561 - LTR1B LTR ERV1 0 826 1 644 188 192 20 chr18 15265987 15266120 -71411428 + MLT1F1 LTR MaLR 335 565 -2 1099 270 49 18 chr18 15266121 15266510 -71411038 + L1ME3A LINE L1 5436 5836 -334 2485 191 21 8 chr18 15266512 15267034 -71410514 + LTR27 LTR ERV1 2 501 0 287 167 76 0 chr18 15267120 15267186 -71410362 - LTR50 LTR ERVL -8 787 717 2280 70 35 0 chr18 15267190 15267476 -71410072 + AluY SINE Alu 1 296 -15 1231 132 118 77 chr18 15267486 15267603 -71409945 + AluJo SINE Alu 4 115 -187 279 0 0 0 chr18 15267603 15267634 -71409914 + (TG)n Simple_repeat Simple_repeat 1 31 0 1231 132 118 77 chr18 15267634 15267710 -71409838 + AluJo SINE Alu 115 186 -116 1885 144 0 0 chr18 15267710 15267974 -71409574 - AluJb SINE Alu -18 294 31 1231 132 118 77 chr18 15267974 15268066 -71409482 + AluJo SINE Alu 186 302 0 739 228 40 0 chr18 15268482 15268631 -71408917 + FRAM SINE Alu 6 160 -16 25 23 0 23 chr18 15269901 15269922 -71407626 + AT_rich Low_complexity Low_complexity 1 21 -21 2053 143 0 3 chr18 15269922 15270223 -71407325 + AluSx SINE Alu 1 300 -12 25 23 0 23 chr18 15270223 15270244 -71407304 + AT_rich Low_complexity Low_complexity 21 42 0 366 295 18 0 chr18 15270245 15270357 -71407191 + L1ME3A LINE L1 6052 6165 -5 2192 96 18 0 chr18 15271182 15271463 -71406085 + AluSg SINE Alu 1 286 -24 1723 138 10 24 chr18 15271821 15272110 -71405438 + AluJb SINE Alu 11 295 -17 1661 161 49 35 chr18 15272246 15272532 -71405016 - AluJo SINE Alu -22 290 1 2214 115 3 6 chr18 15272797 15273109 -71404439 - AluY SINE Alu 0 311 1 596 188 79 59 chr18 15273113 15273315 -71404233 + LTR50 LTR ERVL 1 206 -589 674 232 115 47 chr18 15273371 15273550 -71403998 + LTR50 LTR ERVL 430 595 -200 2586 139 66 2 chr18 15273550 15273975 -71403573 - LTR47A LTR ERVL 0 452 1 674 232 115 47 chr18 15273975 15274043 -71403505 + LTR50 LTR ERVL 595 657 -138 2175 99 51 3 chr18 15274043 15274335 -71403213 - AluSq SINE Alu -7 306 1 674 232 115 47 chr18 15274335 15274350 -71403198 + LTR50 LTR ERVL 657 670 -125 2419 103 3 0 chr18 15274350 15274662 -71402886 - AluSp SINE Alu 0 313 1 674 232 115 47 chr18 15274662 15274737 -71402811 + LTR50 LTR ERVL 670 792 -3 1835 136 29 58 chr18 15275016 15275325 -71402223 - AluJb SINE Alu -12 300 1 2514 51 0 35 chr18 15275330 15275641 -71401907 - AluY SINE Alu -11 300 1 457 262 81 7 chr18 15275955 15276104 -71401444 - L3 LINE CR1 -77 1500 1341 1125 104 13 0 chr18 15276104 15276258 -71401290 - AluY SINE Alu -21 290 135 454 230 33 33 chr18 15276337 15276489 -71401059 - MER69A DNA AcHobo -3 174 23 1269 131 0 0 chr18 15276660 15276836 -71400712 + AluSp SINE Alu 136 311 -2 761 106 97 2 chr18 15276837 15277047 -71400501 - MER51B LTR ERV1 -112 265 1 359 298 149 21 chr18 15277096 15277331 -71400217 - L3 LINE CR1 -696 881 617 280 223 53 21 chr18 15277394 15277488 -71400060 - MER76 LTR ERV -275 413 317 735 126 27 0 chr18 15277496 15277607 -71399941 + AluSg SINE Alu 5 118 -192 25 0 0 0 chr18 15277607 15277632 -71399916 + AT_rich Low_complexity Low_complexity 1 25 0 2248 125 0 0 chr18 15277632 15277928 -71399620 + AluSx SINE Alu 1 296 -16 206 75 25 25 chr18 15277928 15277968 -71399580 + (TA)n Simple_repeat Simple_repeat 1 40 0 614 200 25 110 chr18 15278007 15278205 -71399343 - MER76 LTR ERV -447 241 61 2882 154 35 15 chr18 15278205 15278749 -71398799 + LTR10A LTR ERV1 1 555 -54 373 159 16 0 chr18 15278761 15278824 -71398724 - MER76 LTR ERV -624 64 1 949 210 23 14 chr18 15278843 15279057 -71398491 - MER20 DNA MER1_type 0 219 4 231 237 9 140 chr18 15279346 15279460 -71398088 + L2 LINE L2 3141 3239 -33 234 322 63 40 chr18 15279484 15279643 -71397905 - L2 LINE L2 -1208 2106 1941 2255 121 0 0 chr18 15279643 15279940 -71397608 + AluSg SINE Alu 1 297 -13 234 322 63 40 chr18 15279940 15279954 -71397594 - L2 LINE L2 -1373 1941 1929 1260 163 93 0 chr18 15279994 15280251 -71397297 - LTR35 LTR ERV1 -169 449 169 1941 128 53 0 chr18 15280259 15280540 -71397008 + AluSq SINE Alu 1 296 -17 216 175 0 25 chr18 15280543 15280583 -71396965 + C-rich Low_complexity Low_complexity 5 43 0 10122 29 15 172 chr18 15280583 15282263 -71395285 + SVA Other Other 1 1422 0 185 23 70 23 chr18 15282341 15282384 -71395164 + A-rich Low_complexity Low_complexity 1 45 0 197 288 34 0 chr18 15282640 15282699 -71394849 - L2 LINE L2 -2941 373 313 279 54 0 0 chr18 15282699 15282736 -71394812 + (TG)n Simple_repeat Simple_repeat 1 37 0 2137 113 10 0 chr18 15283017 15283140 -71394408 + AluSx SINE Alu 1 121 -191 183 80 0 0 chr18 15283140 15283165 -71394383 + (TA)n Simple_repeat Simple_repeat 2 26 0 2137 113 10 0 chr18 15283165 15283332 -71394216 + AluSx SINE Alu 121 294 -18 21 82 0 0 chr18 15283340 15283389 -71394159 + AT_rich Low_complexity Low_complexity 1 49 0 310 243 133 49 chr18 15283389 15283615 -71393933 + L1MC5 LINE L1 7499 7743 -218 2284 113 0 0 chr18 15283621 15283913 -71393635 - AluSx SINE Alu -20 292 1 22 35 0 0 chr18 15284055 15284084 -71393464 + AT_rich Low_complexity Low_complexity 1 29 0 703 167 75 0 chr18 15284957 15285077 -71392471 - FLAM_C SINE Alu -2 131 3 2263 95 0 77 chr18 15285105 15285442 -71392106 - AluY SINE Alu 0 311 1 1778 155 36 11 chr18 15286392 15286670 -71390878 + AluJo SINE Alu 1 285 -27 2430 76 3 0 chr18 15286670 15286972 -71390576 - AluY SINE Alu -8 303 1 2368 98 0 19 chr18 15286981 15287297 -71390251 - AluSq SINE Alu -3 310 1 180 0 0 0 chr18 15287461 15287481 -71390067 + (A)n Simple_repeat Simple_repeat 1 20 0 422 259 80 92 chr18 15287481 15287606 -71389942 + MIR SINE MIR 20 142 -120 2301 109 3 3 chr18 15287606 15287918 -71389630 - AluSp SINE Alu -1 312 1 422 259 80 92 chr18 15287918 15288031 -71389517 + MIR SINE MIR 142 255 -7 1359 184 159 0 chr18 15288190 15288435 -71389113 + AluJo SINE Alu 1 284 -18 1539 159 6 86 chr18 15288552 15288891 -71388657 - AluJo SINE Alu 0 312 1 2453 100 0 0 chr18 15289120 15289430 -71388118 - AluSx SINE Alu -2 310 1 218 260 39 39 chr18 15289741 15289818 -71387730 - MIR SINE MIR -69 139 63 2244 185 38 119 chr18 15290955 15291078 -71386470 + LTR8A LTR ERV1 34 165 -562 1997 126 3 11 chr18 15291078 15291400 -71386148 - AluSx SINE Alu 0 320 1 2244 185 38 119 chr18 15291400 15291939 -71385609 + LTR8A LTR ERV1 165 631 -96 2221 118 0 23 chr18 15291939 15292243 -71385305 - AluSx SINE Alu -15 297 1 2244 185 38 119 chr18 15292243 15292333 -71385215 + LTR8A LTR ERV1 631 727 0 2247 111 0 13 chr18 15292958 15293094 -71384454 + AluSq SINE Alu 1 137 -176 2166 107 7 3 chr18 15293094 15293385 -71384163 + AluSx SINE Alu 1 292 -20 2247 111 0 13 chr18 15293385 15293555 -71383993 + AluSq SINE Alu 137 303 -10 2153 84 3 34 chr18 15293654 15293975 -71383573 + AluY SINE Alu 1 311 0 1998 158 0 3 chr18 15294251 15294562 -71382986 - AluSx SINE Alu 0 312 3 2223 115 7 0 chr18 15294592 15294888 -71382660 + AluSx SINE Alu 1 298 -14 406 263 26 0 chr18 15295124 15295238 -71382310 + MER94 DNA DNA 17 133 -1 2377 230 60 37 chr18 15296093 15296558 -71380990 + MER50 LTR ERV1 14 502 -232 2640 61 0 0 chr18 15296558 15296869 -71380679 + AluY SINE Alu 1 311 0 2377 230 60 37 chr18 15296869 15297108 -71380440 + MER50 LTR ERV1 502 734 0 213 316 16 0 chr18 15297171 15297254 -71380294 + GA-rich Low_complexity Low_complexity 1 84 0 1966 166 0 13 chr18 15297338 15297652 -71379896 - AluJb SINE Alu -2 310 1 2166 127 0 22 chr18 15297688 15298003 -71379545 + AluSx SINE Alu 2 309 -3 1928 128 4 4 chr18 15298060 15298333 -71379215 + AluSx SINE Alu 3 275 -37 279 71 0 0 chr18 15298337 15298379 -71379169 + (CAAAA)n Simple_repeat Simple_repeat 1 42 0 24 0 0 0 chr18 15299517 15299541 -71378007 + AT_rich Low_complexity Low_complexity 1 24 0 2517 57 10 0 chr18 15299608 15299906 -71377642 + AluSp SINE Alu 1 301 -12 189 0 0 0 chr18 15299930 15299951 -71377597 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2258 130 90 72 chr18 15299981 15300578 -71376970 + MER4B LTR ERV1 1 778 -1 1060 183 0 86 chr18 15300589 15300846 -71376702 - AluJo SINE Alu -77 235 1 25 0 0 0 chr18 15301859 15301884 -71375664 + GC_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr18 15301918 15301939 -71375609 + GC_rich Low_complexity Low_complexity 1 21 0 184 348 0 0 chr18 15302520 15302566 -71374982 + L2 LINE L2 3215 3260 -12 433 293 10 29 chr18 15302681 15302886 -71374662 + L1MC5 LINE L1 7269 7469 -492 810 109 16 31 chr18 15302891 15303019 -71374529 + FAM SINE Alu 42 167 -18 541 238 47 104 chr18 15303033 15303137 -71374411 + L1MC5 LINE L1 7515 7623 -338 2395 68 0 36 chr18 15303137 15303446 -71374102 + AluY SINE Alu 1 298 -13 541 238 47 104 chr18 15303446 15303715 -71373833 + L1MC5 LINE L1 7623 7864 -97 1698 198 59 67 chr18 15303715 15304224 -71373324 + MLT1D LTR MaLR 1 505 0 541 238 47 104 chr18 15304224 15304273 -71373275 + L1MC5 LINE L1 7864 7914 -47 2130 107 21 10 chr18 15304275 15304564 -71372984 + AluSg SINE Alu 2 293 -17 2225 119 3 0 chr18 15304824 15305126 -71372422 - AluSx SINE Alu -9 303 1 2149 104 0 27 chr18 15305446 15305745 -71371803 + AluSq SINE Alu 3 293 -20 1728 173 7 7 chr18 15305823 15306118 -71371430 - AluSx SINE Alu -17 295 1 561 272 8 0 chr18 15306134 15306259 -71371289 - FLAM_A SINE Alu -16 126 1 355 167 0 0 chr18 15306507 15306561 -71370987 + AluS SINE Alu 29 82 -221 739 228 40 0 chr18 15306709 15306858 -71370690 - FRAM SINE Alu -16 160 6 1205 136 118 77 chr18 15307275 15307367 -71370181 - AluJo SINE Alu 0 302 215 1885 144 0 0 chr18 15307367 15307631 -71369917 + AluJb SINE Alu 31 294 -18 1205 136 118 77 chr18 15307631 15307707 -71369841 - AluJo SINE Alu -87 215 144 279 0 0 0 chr18 15307707 15307738 -71369810 + (CA)n Simple_repeat Simple_repeat 1 31 0 1205 136 118 77 chr18 15307738 15307855 -71369693 - AluJo SINE Alu -158 144 4 2280 70 35 0 chr18 15307865 15308151 -71369397 - AluY SINE Alu -15 296 1 287 167 76 0 chr18 15308155 15308221 -71369327 + LTR50 LTR ERVL 717 787 -8 2485 191 21 8 chr18 15308307 15308829 -71368719 - LTR27 LTR ERV1 0 501 2 1099 270 49 18 chr18 15308831 15309220 -71368328 - L1ME3A LINE L1 -334 5836 5436 572 147 186 0 chr18 15309221 15309350 -71368198 - MLT1F LTR MaLR -2 540 388 3575 184 134 16 chr18 15309354 15310091 -71367457 + LTR1B LTR ERV1 1 824 -2 618 197 24 2 chr18 15310265 15310401 -71367147 - MLT1F1 LTR MaLR -419 136 1 961 109 7 15 chr18 15310422 15310559 -71366989 - AluJo SINE Alu -176 136 1 2014 135 14 3 chr18 15310575 15310871 -71366677 - AluSq SINE Alu -14 299 1 561 272 8 0 chr18 15310887 15311012 -71366536 - FLAM_A SINE Alu -16 126 1 1455 181 30 23 chr18 15311260 15311526 -71366022 + AluSx SINE Alu 29 296 -16 1230 243 71 38 chr18 15311877 15312326 -71365222 - MLT1E1 LTR MaLR -51 603 140 251 266 0 0 chr18 15312304 15312368 -71365180 + Alu SINE Alu 230 293 -7 * 2124 123 0 7 chr18 15312429 15312729 -71364819 - AluSx SINE Alu -14 298 1 2150 95 21 3 chr18 15312759 15313044 -71364504 + AluSx SINE Alu 1 290 -22 2325 103 0 7 chr18 15313146 15313447 -71364101 + AluSg SINE Alu 1 299 -11 1870 139 3 42 chr18 15313517 15313826 -71363722 + AluJb SINE Alu 1 297 -15 1896 172 8 72 chr18 15314864 15315254 -71362294 + MLT1A1 LTR MaLR 1 365 0 1102 150 30 33 chr18 15315389 15315623 -71361925 + AluJb SINE Alu 1 304 -8 273 222 0 0 chr18 15315623 15315686 -71361862 + GA-rich Low_complexity Low_complexity 3 65 0 2509 77 0 0 chr18 15315889 15316200 -71361348 + AluY SINE Alu 1 311 0 426 298 9 0 chr18 15316231 15316345 -71361203 + MIR SINE MIR 148 262 0 799 169 0 22 chr18 15316849 15316985 -71360563 - FLAM_C SINE Alu 0 133 1 2287 116 0 0 chr18 15317315 15317617 -71359931 - AluSx SINE Alu -10 302 1 1311 146 12 61 chr18 15318237 15318483 -71359065 + AluJo SINE Alu 79 312 0 251 263 38 0 chr18 15318493 15318573 -71358975 + Charlie2 DNA MER1_type 2780 2862 0 2484 73 7 0 chr18 15318654 15318957 -71358591 - AluY SINE Alu -6 305 1 1399 98 0 5 chr18 15319133 15319317 -71358231 + AluSg/x SINE Alu 130 312 0 232 246 15 62 chr18 15319387 15319452 -71358096 - L2 LINE L2 -10 3262 3201 2806 201 35 24 chr18 15319460 15319611 -71357937 + MER82 DNA MER2_type 11 159 -494 2402 94 0 0 chr18 15319611 15319908 -71357640 - AluSx SINE Alu -15 297 1 2806 201 35 24 chr18 15319908 15319947 -71357601 + MER82 DNA MER2_type 159 196 -457 2539 65 0 0 chr18 15319947 15320254 -71357294 - AluY SINE Alu -4 307 1 2806 201 35 24 chr18 15320254 15320698 -71356850 + MER82 DNA MER2_type 196 653 0 2970 176 32 23 chr18 15320750 15321365 -71356183 + Tigger3b DNA MER2_type 1 621 -610 180 97 0 0 chr18 15321367 15321398 -71356150 + (TA)n Simple_repeat Simple_repeat 1 31 0 2104 112 24 0 chr18 15321418 15321580 -71355968 - AluY SINE Alu -17 294 120 183 42 0 0 chr18 15321580 15321604 -71355944 + (TTTTG)n Simple_repeat Simple_repeat 5 28 0 2104 112 24 0 chr18 15321604 15321728 -71355820 - AluY SINE Alu -191 120 1 1041 197 11 0 chr18 15321747 15321951 -71355597 + FRAM SINE Alu 1 202 0 3009 118 83 19 chr18 15321952 15322275 -71355273 + Tigger3b DNA MER2_type 617 918 -2111 2370 67 7 0 chr18 15322275 15322581 -71354967 - AluSp SINE Alu 0 308 1 3009 118 83 19 chr18 15322581 15322834 -71354714 + Tigger3b DNA MER2_type 918 1231 -1 1394 121 40 0 chr18 15322871 15323094 -71354454 + AluSx SINE Alu 1 232 -80 396 0 0 0 chr18 15323205 15323249 -71354299 + (TA)n Simple_repeat Simple_repeat 2 45 0 1906 133 13 70 chr18 15323472 15323788 -71353760 - AluSx SINE Alu -14 298 1 212 352 29 9 chr18 15323942 15324047 -71353501 + MIR SINE MIR 39 145 -117 469 286 85 8 chr18 15324590 15324849 -71352699 + L1ME LINE L1 5544 5822 -299 1792 141 0 0 chr18 15324943 15325191 -71352357 + AluSx SINE Alu 49 296 -16 190 79 26 26 chr18 15325406 15325444 -71352104 + (TCCC)n Simple_repeat Simple_repeat 3 40 0 1084 128 66 43 chr18 15325452 15325663 -71351885 - L1MC1 LINE L1 -11 6322 6107 4129 131 39 6 chr18 15325665 15326278 -71351270 - L1MC1 LINE L1 -261 6072 5421 2061 116 32 0 chr18 15326278 15326562 -71350986 - AluSg SINE Alu -17 293 1 4129 131 39 6 chr18 15326562 15326675 -71350873 - L1MC1 LINE L1 -912 5421 5313 2316 98 7 0 chr18 15326728 15327025 -71350523 - AluSp SINE Alu -14 299 1 203 216 0 0 chr18 15327235 15327272 -71350276 - L2 LINE L2 0 3313 3277 1786 168 0 32 chr18 15328260 15328576 -71348972 - AluJo SINE Alu -6 306 1 2102 132 7 3 chr18 15329797 15330107 -71347441 - AluY SINE Alu 0 311 1 2305 101 10 0 chr18 15330117 15330414 -71347134 - AluSq SINE Alu -13 300 1 236 275 246 0 chr18 15330564 15330706 -71346842 + MER5A DNA MER1_type 7 183 -6 1749 159 42 10 chr18 15331846 15332135 -71345413 - AluJb SINE Alu -14 298 1 2242 121 10 0 chr18 15332278 15332575 -71344973 + AluSx SINE Alu 1 300 -12 1093 169 109 5 chr18 15333060 15333261 -71344287 + AluJo SINE Alu 29 250 -62 1401 162 0 4 chr18 15333262 15333490 -71344058 + AluJo SINE Alu 85 311 -1 209 282 128 0 chr18 15334049 15334127 -71343421 + MIR SINE MIR 29 116 -92 1102 219 60 98 chr18 15334219 15334699 -71342849 - MER4C LTR ERV1 -3 462 1 302 271 153 0 chr18 15335128 15335246 -71342302 + MIR SINE MIR 69 204 -58 1909 160 0 0 chr18 15335627 15335909 -71341639 + AluSx SINE Alu 20 301 -11 198 286 18 0 chr18 15336807 15336863 -71340685 - MIR3 SINE MIR -8 200 144 1854 130 98 0 chr18 15337566 15337842 -71339706 - AluSx SINE Alu -9 303 1 408 235 50 8 chr18 15338055 15338174 -71339374 - MER65A LTR ERV1 -321 124 1 2319 86 0 7 chr18 15338356 15338647 -71338901 + AluSq SINE Alu 1 289 -24 25 0 0 0 chr18 15339323 15339348 -71338200 + GC_rich Low_complexity Low_complexity 1 25 0 2038 141 7 0 chr18 15340300 15340605 -71336943 + AluSq SINE Alu 1 307 -6 204 40 0 0 chr18 15340958 15340983 -71336565 + (T)n Simple_repeat Simple_repeat 1 25 0 487 248 54 16 chr18 15341318 15341447 -71336101 + MIR SINE MIR 59 192 -70 686 264 78 78 chr18 15341459 15341981 -71335567 - MER34 LTR ERV1 -4 538 17 849 220 34 70 chr18 15342062 15342549 -71334999 - MER34-int LTR ERV1 -164 6167 4415 289 245 104 19 chr18 15342582 15342688 -71334860 - LTR37A LTR ERV1 -309 117 3 1359 158 19 9 chr18 15342722 15342937 -71334611 + AluJo SINE Alu 4 220 -92 367 195 39 0 chr18 15342947 15343024 -71334524 - AluJ/FRAM SINE Alu -4 298 219 280 350 51 26 chr18 15343125 15343242 -71334306 + L2 LINE L2 3123 3242 -30 230 219 16 31 chr18 15343247 15343311 -71334237 - MIR SINE MIR 0 262 200 626 263 103 39 chr18 15343314 15343721 -71333827 + MER34 LTR ERV1 13 445 -97 880 142 15 0 chr18 15343724 15343858 -71333690 - AluJo SINE Alu -176 136 1 2321 100 3 7 chr18 15343864 15344164 -71333384 - AluSx SINE Alu -11 301 3 269 204 39 48 chr18 15344171 15344274 -71333274 + MER34 LTR ERV1 432 533 -9 320 245 106 45 chr18 15344348 15344593 -71332955 + MER34-int LTR ERV1 72 331 -6000 850 263 117 57 chr18 15344717 15345379 -71332169 + MER34-int LTR ERV1 452 1024 -5307 1003 210 92 48 chr18 15345404 15345761 -71331787 - MLT1A2 LTR MaLR -1 373 1 1486 141 0 39 chr18 15345764 15345905 -71331643 - MLT1A2-int LTR MaLR 0 1735 1607 1591 148 43 36 chr18 15345905 15346209 -71331339 + AluJb SINE Alu 1 306 -6 1486 141 0 39 chr18 15346209 15346323 -71331225 - MLT1A2-int LTR MaLR -128 1607 1490 483 132 0 0 chr18 15346328 15346396 -71331152 - MER41B LTR ERV1 0 635 568 2054 131 3 0 chr18 15346397 15346679 -71330869 + AluSx SINE Alu 1 283 -29 790 307 80 60 chr18 15347785 15349087 -71328461 - HSREP522 Satellite telomeric 0 1328 1 213 289 53 0 chr18 15349661 15349737 -71327811 - MIR3 SINE MIR -34 174 95 3062 240 102 14 chr18 15351323 15353152 -71324396 - L1MDa LINE L1 -3055 3485 1496 309 331 129 13 chr18 15353444 15353755 -71323793 + L2 LINE L2 2842 3188 -125 48 18 0 0 chr18 15354222 15354277 -71323271 + AT_rich Low_complexity Low_complexity 1 55 0 21 0 0 0 chr18 15354309 15354330 -71323218 + AT_rich Low_complexity Low_complexity 1 21 0 549 250 142 12 chr18 15355106 15355346 -71322202 + L1ME3A LINE L1 3887 4157 -1989 536 289 178 20 chr18 15355427 15355877 -71321671 + L1ME3A LINE L1 4757 5277 -869 22 0 0 0 chr18 15356543 15356565 -71320983 + AT_rich Low_complexity Low_complexity 1 22 0 1958 133 3 0 chr18 15357381 15357666 -71319882 - AluSx SINE Alu -26 286 1 5124 171 1 4 chr18 15357666 15358491 -71319057 + L1PA12 LINE L1 1035 1857 -5724 1900 207 121 16 chr18 15358493 15358923 -71318625 - L1PA12 LINE L1 -6259 1322 848 11115 131 17 25 chr18 15358956 15359214 -71318334 + L1PA12 LINE L1 1014 1273 -6308 465 19 0 0 chr18 15359214 15359268 -71318280 + (CACAG)n Simple_repeat Simple_repeat 3 56 0 11115 131 17 25 chr18 15359268 15359329 -71318219 + L1PA12 LINE L1 1273 1333 -6248 1998 137 7 3 chr18 15359329 15359628 -71317920 + AluSg SINE Alu 4 303 -7 11115 131 17 25 chr18 15359628 15361076 -71316472 + L1PA12 LINE L1 1333 2768 -4813 44348 39 5 3 chr18 15361077 15362868 -71314680 + L1P2 LINE L1 39 1825 -4330 2361 84 0 7 chr18 15362868 15363165 -71314383 - AluY SINE Alu -16 295 1 44348 39 5 3 chr18 15363165 15367104 -71310444 + L1P2 LINE L1 1825 5780 -375 236 268 18 0 chr18 15369583 15369639 -71307909 + (TGGA)n Simple_repeat Simple_repeat 4 60 0 1038 146 12 18 chr18 15371445 15371616 -71305932 - AluSx SINE Alu -22 290 121 180 0 0 0 chr18 15371845 15371865 -71305683 + (A)n Simple_repeat Simple_repeat 1 20 0 971 146 0 0 chr18 15372318 15372455 -71305093 - AluSx SINE Alu -175 137 1 939 289 144 15 chr18 15372682 15373266 -71304282 + L1ME3A LINE L1 5499 6157 -13 2073 99 10 24 chr18 15373671 15374002 -71303546 + AluSc SINE Alu 1 327 0 200 352 0 45 chr18 15374058 15374146 -71303402 + MIR3 SINE MIR 119 202 -6 44030 31 22 1 chr18 15375231 15381104 -71296444 + L1PA2 LINE L1 1 6001 -154 1267 20 0 0 chr18 15381219 15381365 -71296183 + L1PA2 LINE L1 6007 6152 -3 1407 237 52 42 chr18 15381378 15381706 -71295842 - L1ME1 LINE L1 -137 6029 5693 5887 182 39 9 chr18 15381706 15382902 -71294646 + Tigger3b DNA MER2_type 1 1231 0 1407 237 52 42 chr18 15382902 15383075 -71294473 - L1ME1 LINE L1 -473 5693 5523 22 35 0 0 chr18 15383192 15383221 -71294327 + AT_rich Low_complexity Low_complexity 1 29 0 661 231 59 27 chr18 15383981 15384202 -71293346 - L1MB4 LINE L1 -1 6179 5952 2528 213 44 59 chr18 15386543 15387061 -71290487 - L1MB4 LINE L1 -192 5988 5464 2221 92 0 11 chr18 15387061 15387364 -71290184 + AluY SINE Alu 1 300 0 2216 109 0 0 chr18 15387373 15387666 -71289882 + AluSg SINE Alu 1 293 -17 2528 213 44 59 chr18 15387666 15388164 -71289384 - L1MB4 LINE L1 -724 5456 4981 356 294 9 9 chr18 15389543 15389652 -71287896 + MIR SINE MIR 6 114 -148 21 0 0 0 chr18 15390038 15390059 -71287489 + AT_rich Low_complexity Low_complexity 1 21 0 185 286 0 0 chr18 15390592 15390648 -71286900 - MIR3 SINE MIR 0 208 153 409 261 126 67 chr18 15390946 15391009 -71286539 + L1ME LINE L1 5410 5468 -653 1311 162 8 17 chr18 15391009 15391244 -71286304 + MER46A DNA MER2_type 1 233 -3 409 261 126 67 chr18 15391244 15391570 -71285978 + L1ME LINE L1 5468 5822 -299 2492 62 0 10 chr18 15392061 15392367 -71285181 - AluY SINE Alu -8 303 1 304 308 40 16 chr18 15392911 15393158 -71284390 - L1M4 LINE L1 -2641 3505 3253 1684 158 0 28 chr18 15393321 15393605 -71283943 - AluSx SINE Alu -2 310 35 778 274 142 12 chr18 15393777 15394179 -71283369 - L1MB4 LINE L1 -2100 5708 5255 206 0 69 0 chr18 15394202 15394231 -71283317 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 31 44 0 0 chr18 15394279 15394324 -71283224 + AT_rich Low_complexity Low_complexity 1 45 0 207 0 0 0 chr18 15395104 15395127 -71282421 + (TG)n Simple_repeat Simple_repeat 2 24 0 308 226 91 58 chr18 15395926 15396137 -71281411 + L1ME LINE L1 5568 5794 -327 211 325 65 35 chr18 15397550 15397603 -71279945 - MIR3 SINE MIR -3 205 155 2288 79 0 4 chr18 15397603 15397907 -71279641 + AluSc SINE Alu 1 303 0 211 325 65 35 chr18 15397907 15398021 -71279527 - MIR3 SINE MIR -53 155 32 291 155 47 14 chr18 15399853 15400001 -71277547 + (TA)n Simple_repeat Simple_repeat 1 153 0 278 244 26 13 chr18 15400033 15400111 -71277437 - MER103 DNA DNA -65 101 23 302 274 0 32 chr18 15402384 15402479 -71275069 - HAL1 LINE L1 -1600 907 816 2314 70 6 35 chr18 15403253 15403569 -71273979 - AluY SINE Alu -4 307 1 23 0 0 0 chr18 15403831 15403854 -71273694 + AT_rich Low_complexity Low_complexity 1 23 0 293 268 103 0 chr18 15404332 15404429 -71273119 + MER117 DNA MER1_type 46 152 -45 23 0 0 0 chr18 15406020 15406043 -71271505 + AT_rich Low_complexity Low_complexity 1 23 0 9125 191 69 9 chr18 15406131 15411351 -71266197 - L1MA2 LINE L1 0 7723 2035 * 40219 75 12 4 chr18 15411345 15417442 -71260106 - L1PA6 LINE L1 -2 6152 3 9060 202 41 14 chr18 15417454 15419177 -71258371 - L1PA13 LINE L1 -3756 3041 1216 186 43 0 0 chr18 15419177 15419200 -71258348 + (CAG)n Simple_repeat Simple_repeat 1 23 0 9060 202 41 14 chr18 15419200 15419877 -71257671 - L1PA13 LINE L1 -5581 1216 559 2259 121 0 0 chr18 15420111 15420408 -71257140 + AluSx SINE Alu 1 297 -15 211 261 43 0 chr18 15421933 15422002 -71255546 - L2 LINE L2 -1 3312 3241 261 320 27 34 chr18 15422191 15422338 -71255210 - L2 LINE L2 -212 3060 2915 182 298 201 50 chr18 15422448 15423130 -71254418 - L2 LINE L2 -543 2771 1987 291 290 74 6 chr18 15424177 15424339 -71253209 + MIR SINE MIR 51 223 -39 2028 37 24 0 chr18 15424851 15425097 -71252451 - L1PA4 LINE L1 0 6155 5904 259 230 40 30 chr18 15425586 15425686 -71251862 - L1MB7 LINE L1 -34 6150 6050 45079 37 2 6 chr18 15425694 15431697 -71245851 + L1PA3 LINE L1 1 5978 -177 1133 216 96 34 chr18 15431937 15432261 -71245287 - MER2 DNA MER2_type 0 344 1 578 62 12 0 chr18 15433386 15433466 -71244082 + L1MA5 LINE L1 6218 6298 -2 203 0 0 36 chr18 15434796 15434824 -71242724 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2140 107 4 0 chr18 15434828 15435109 -71242439 - AluSq SINE Alu -31 282 1 235 234 0 54 chr18 15435482 15435559 -71241989 + MIR SINE MIR 57 130 -78 287 143 0 18 chr18 15435942 15435998 -71241550 + (TTTTC)n Simple_repeat Simple_repeat 5 59 0 2235 124 0 0 chr18 15436008 15436314 -71241234 - AluSx SINE Alu -6 306 1 4982 203 53 44 chr18 15436547 15437894 -71239654 - L1 LINE L1 -2002 4144 2785 604 249 73 47 chr18 15438025 15438367 -71239181 + HSREP522 Satellite telomeric 2 352 -152 199 150 0 62 chr18 15439233 15439313 -71238235 + (CCCTG)n Simple_repeat Simple_repeat 2 76 0 206 204 0 97 chr18 15439379 15439575 -71237973 + (GCCTG)n Simple_repeat Simple_repeat 2 178 0 * 374 198 6 68 chr18 15439463 15439640 -71237908 + (CCCTG)n Simple_repeat Simple_repeat 1 166 0 317 304 41 0 chr18 15439724 15439895 -71237653 + (CCCTAG)n Simple_repeat Simple_repeat 2 179 0 235 203 25 0 chr18 15440131 15440210 -71237338 + (CCCTAG)n Simple_repeat Simple_repeat 2 82 0 216 157 0 59 chr18 15440249 15440351 -71237197 + (CCCTG)n Simple_repeat Simple_repeat 1 96 0 499 253 47 0 chr18 15440514 15440684 -71236864 + (CCCTAG)n Simple_repeat Simple_repeat 1 178 0 280 293 42 18 chr18 15440697 15440864 -71236684 + (CCCTAG)n Simple_repeat Simple_repeat 2 172 0 292 196 0 81 chr18 15440962 15441110 -71236438 + (CCCTG)n Simple_repeat Simple_repeat 1 136 0 184 138 0 35 chr18 15441134 15441192 -71236356 + (CCCTG)n Simple_repeat Simple_repeat 1 56 0 233 224 0 68 chr18 15441280 15441427 -71236121 + (GCCTG)n Simple_repeat Simple_repeat 3 139 0 198 143 0 71 chr18 15441439 15441537 -71236011 + (CCCTG)n Simple_repeat Simple_repeat 2 92 0 269 170 0 89 chr18 15441715 15441827 -71235721 + (CCCTG)n Simple_repeat Simple_repeat 1 102 0 * 423 243 53 0 chr18 15441744 15441896 -71235652 + (CCCTAG)n Simple_repeat Simple_repeat 1 160 0 391 274 42 0 chr18 15441907 15442075 -71235473 + (CCCTAG)n Simple_repeat Simple_repeat 6 180 0 * 474 165 0 82 chr18 15441973 15442167 -71235381 + (CCCTG)n Simple_repeat Simple_repeat 3 180 0 405 267 43 6 chr18 15442130 15442291 -71235257 + (CCCTAG)n Simple_repeat Simple_repeat 6 172 0 * 27 29 0 0 chr18 15442306 15442340 -71235208 + AT_rich Low_complexity Low_complexity 1 34 0 351 247 23 92 chr18 15442404 15442578 -71234970 - MIR SINE MIR 0 262 101 957 103 0 15 chr18 15442581 15442717 -71234831 + AluSq/x SINE Alu 1 134 -178 1258 293 21 21 chr18 15442723 15443378 -71234170 - L1P LINE L1 -855 5291 4618 555 266 43 77 chr18 15443384 15443517 -71234031 - L1MA6 LINE L1 -12 6288 6152 2453 94 3 0 chr18 15443517 15443825 -71233723 + AluSg SINE Alu 1 309 -1 555 266 43 77 chr18 15443825 15444018 -71233530 - L1MA6 LINE L1 -148 6152 5973 181 146 42 0 chr18 15445796 15445844 -71231704 + (CTAGGG)n Simple_repeat Simple_repeat 2 51 0 250 138 0 46 chr18 15445880 15445945 -71231603 + (CAGGG)n Simple_repeat Simple_repeat 1 62 0 2273 56 0 4 chr18 15446028 15446298 -71231250 - AluY SINE Alu -14 297 29 11546 198 67 39 chr18 15446398 15449717 -71227831 + L1PA12 LINE L1 2144 5688 -1896 433 188 0 0 chr18 15449717 15449786 -71227762 + AluS SINE Alu 228 296 -16 11546 198 67 39 chr18 15449786 15450186 -71227362 + L1PA12 LINE L1 5688 6075 -1509 2177 141 0 3 chr18 15450187 15450500 -71227048 + AluSx SINE Alu 1 312 0 5672 204 50 13 chr18 15451675 15452986 -71224562 + L1 LINE L1 2785 4144 -2002 1599 211 43 28 chr18 15452998 15453380 -71224168 - HSREP522 Satellite telomeric -158 387 1 917 250 79 75 chr18 15454093 15454750 -71222798 + HSREP522 Satellite telomeric 1 659 -99 6364 104 12 27 chr18 15454977 15456221 -71221327 + L1PA14 LINE L1 4924 6160 -1 1302 214 88 76 chr18 15456983 15457404 -71220144 + MSTB LTR MaLR 1 426 0 577 288 72 8 chr18 15457543 15457779 -71219769 - MER112 DNA MER1_type -3 253 3 186 128 0 0 chr18 15458017 15458056 -71219492 + (TC)n Simple_repeat Simple_repeat 1 39 0 545 183 202 0 chr18 15458057 15458161 -71219387 - FLAM_C SINE Alu -8 125 1 558 260 59 33 chr18 15458307 15458499 -71219049 - L1MC3 LINE L1 -20 6146 5962 400 175 0 60 chr18 15459416 15459599 -71217949 + (TG)n Simple_repeat Simple_repeat 1 172 0 212 338 149 22 chr18 15460792 15461068 -71216480 + L2 LINE L2 1722 2067 -1247 2117 106 0 3 chr18 15461068 15461378 -71216170 - AluSq SINE Alu 0 309 1 212 338 149 22 chr18 15461378 15461503 -71216045 + L2 LINE L2 2067 2175 -1139 315 264 113 54 chr18 15461709 15462088 -71215460 + HSREP522 Satellite telomeric 1 401 -96 1686 85 69 41 chr18 15462675 15462921 -71214627 - AluSx SINE Alu -13 299 47 360 303 97 6 chr18 15464966 15465141 -71212407 + Charlie8 DNA MER1_type 95 285 -2132 467 252 101 27 chr18 15466095 15466309 -71211239 + MIR SINE MIR 7 231 -31 679 162 9 0 chr18 15467619 15467724 -71209824 + U6 snRNA snRNA 1 106 -1 182 336 80 8 chr18 15468418 15468543 -71209005 - MIR SINE MIR -47 215 82 2059 187 39 42 chr18 15469263 15469697 -71207851 - Tigger2a DNA MER2_type 0 434 2 23 0 0 0 chr18 15470054 15470077 -71207471 + AT_rich Low_complexity Low_complexity 1 23 0 22 80 0 0 chr18 15472519 15472569 -71204979 + AT_rich Low_complexity Low_complexity 1 50 0 721 181 16 0 chr18 15474611 15474738 -71202810 - THE1-int LTR MaLR -424 1156 1028 30 0 0 0 chr18 15476314 15476344 -71201204 + AT_rich Low_complexity Low_complexity 1 30 0 425 287 108 27 chr18 15476760 15477018 -71200530 + L1ME LINE L1 5381 5659 -462 2020 137 63 33 chr18 15477388 15477752 -71199796 - THE1C LTR MaLR 0 375 1 5417 148 22 14 chr18 15477752 15478650 -71198898 - THE1C-int LTR MaLR 0 1580 676 479 228 181 0 chr18 15478933 15479060 -71198488 - MER58B DNA MER1_type 0 341 192 261 0 0 0 chr18 15479142 15479171 -71198377 + (A)n Simple_repeat Simple_repeat 1 29 0 843 326 30 9 chr18 15479336 15479762 -71197786 - L1 LINE L1 -1489 4657 4223 277 270 22 11 chr18 15480854 15480943 -71196605 + MIR SINE MIR 23 112 -150 355 301 64 29 chr18 15480972 15481145 -71196403 - MIR SINE MIR -53 209 31 2111 110 27 0 chr18 15485863 15486162 -71191386 + AluSx SINE Alu 1 307 -5 618 330 35 15 chr18 15487317 15487578 -71189970 + L2 LINE L2 1777 2042 -1272 353 185 49 0 chr18 15487580 15487661 -71189887 - L1P LINE L1 -3049 3097 3013 * 3213 172 35 44 chr18 15487660 15487707 -71189841 + L1PA13 LINE L1 3803 3849 -2297 2220 93 14 7 chr18 15487707 15487998 -71189550 + AluSc SINE Alu 1 293 -16 3213 172 35 44 chr18 15487998 15488635 -71188913 + L1PA13 LINE L1 3849 4481 -1665 1405 123 0 0 chr18 15488637 15488824 -71188724 + AluSq SINE Alu 75 261 -52 5403 121 41 22 chr18 15488951 15489722 -71187826 + L1PA13 LINE L1 4549 5304 -859 1841 145 27 0 chr18 15489722 15490018 -71187530 - AluSx SINE Alu -8 304 1 5403 121 41 22 chr18 15490018 15490169 -71187379 + L1PA13 LINE L1 5304 5451 -712 2176 117 3 0 chr18 15490169 15490468 -71187080 + AluSg SINE Alu 1 300 -10 5403 121 41 22 chr18 15490468 15491118 -71186430 + L1PA13 LINE L1 5451 6148 -15 707 274 36 14 chr18 15491242 15491461 -71186087 + MIR SINE MIR 6 229 -33 333 339 45 28 chr18 15492602 15492779 -71184769 + L2 LINE L2 2563 2742 -572 643 208 34 13 chr18 15492904 15493053 -71184495 - L1MA10 LINE L1 -11 6323 6172 389 225 192 22 chr18 15493050 15493232 -71184316 - L1ME LINE L1 -560 6104 5892 * 1040 131 156 0 chr18 15493238 15493437 -71184111 + Tigger4(Zombi) DNA MER2_type 2502 2731 0 1035 222 87 87 chr18 15493437 15493956 -71183592 - L1ME LINE L1 -1365 5279 4761 377 276 0 11 chr18 15494075 15494162 -71183386 - MER58 DNA MER1_type -66 275 190 1419 359 121 7 chr18 15494232 15495174 -71182374 - L1ME LINE L1 -1939 4705 3657 1577 194 78 3 chr18 15495185 15495504 -71182044 - MLT1A1 LTR MaLR -22 343 1 1474 259 55 18 chr18 15495511 15495550 -71181998 - L1MEc LINE L1 -3016 3628 3592 204 67 0 0 chr18 15495550 15495580 -71181968 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1474 259 55 18 chr18 15495580 15496724 -71180824 - L1MEc LINE L1 -3052 3592 2387 320 270 109 15 chr18 15496747 15496884 -71180664 - L1MEc LINE L1 -4904 1638 1489 1173 286 95 39 chr18 15497017 15497682 -71179866 - L1MEc LINE L1 -5655 1170 469 256 363 85 64 chr18 15497684 15498026 -71179522 + L2 LINE L2 2924 3272 0 372 281 146 30 chr18 15498508 15498810 -71178738 - L1ME4a LINE L1 -278 5843 5507 1730 156 6 31 chr18 15498840 15499160 -71178388 - AluSx SINE Alu 0 312 1 22 35 0 0 chr18 15499580 15499609 -71177939 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr18 15500144 15500182 -71177366 + AT_rich Low_complexity Low_complexity 1 38 0 185 180 0 148 chr18 15500672 15500733 -71176815 + MIR SINE MIR 175 226 -36 316 320 52 0 chr18 15503021 15503174 -71174374 - L2 LINE L2 -432 2882 2722 23 33 0 0 chr18 15503489 15503519 -71174029 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr18 15503816 15503857 -71173691 + AT_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr18 15503882 15503904 -71173644 + AT_rich Low_complexity Low_complexity 1 22 0 2012 110 0 23 chr18 15504589 15504890 -71172658 + AluSx SINE Alu 1 294 -18 829 216 23 6 chr18 15505101 15505277 -71172271 - MER58A DNA MER1_type -7 217 39 2446 65 0 3 chr18 15505277 15505583 -71171965 + AluY SINE Alu 1 305 -6 21 36 0 0 chr18 15505602 15505630 -71171918 + AT_rich Low_complexity Low_complexity 1 28 0 1903 126 11 4 chr18 15505833 15506110 -71171438 - AluSx SINE Alu -33 279 1 883 218 0 6 chr18 15506110 15506289 -71171259 - MER46B DNA MER2_type -181 55 3 339 65 0 0 chr18 15506841 15506887 -71170661 + (TG)n Simple_repeat Simple_repeat 2 47 0 1779 229 74 88 chr18 15507095 15507942 -71169606 - L1M4 LINE L1 -1471 4675 3841 27 0 0 0 chr18 15507961 15507988 -71169560 + AT_rich Low_complexity Low_complexity 1 27 0 3783 186 75 8 chr18 15508068 15508930 -71168618 - L1MB4 LINE L1 -7 6173 5254 1103 23 8 0 chr18 15509537 15509670 -71167878 - L1PA5 LINE L1 -1 6153 6020 370 288 93 14 chr18 15509863 15510002 -71167546 + MIR SINE MIR 110 259 -3 2371 46 0 0 chr18 15510069 15510381 -71167167 - AluY SINE Alu 0 312 1 308 191 206 8 chr18 15561910 15562036 -71115512 - L1ME3A LINE L1 -53 6117 5967 1457 161 55 20 chr18 15562048 15562303 -71115245 - AluJo SINE Alu -16 296 33 946 128 39 19 chr18 15562303 15562459 -71115089 - AluSg/x SINE Alu -9 301 143 2331 99 0 0 chr18 15562467 15562760 -71114788 - AluSg SINE Alu -17 293 1 214 367 13 0 chr18 15563014 15563093 -71114455 - L2 LINE L2 0 3272 3193 245 350 110 5 chr18 15564372 15564572 -71112976 + MIR SINE MIR 2 222 -40 257 216 0 0 chr18 15564887 15564938 -71112610 + MER3 DNA MER1_type 40 90 -119 * 792 193 14 90 chr18 15564899 15564961 -71112587 - MER3 DNA MER1_type -4 205 140 2084 84 46 32 chr18 15564961 15565245 -71112303 + AluSq SINE Alu 7 294 -19 792 193 14 90 chr18 15565245 15565394 -71112154 - MER3 DNA MER1_type -69 140 10 2157 85 0 50 chr18 15565442 15565761 -71111787 + AluY SINE Alu 1 303 -8 2115 142 0 0 chr18 15565765 15566060 -71111488 + AluJb SINE Alu 1 295 -17 2160 131 3 16 chr18 15566062 15566375 -71111173 + AluSc SINE Alu 1 309 0 2610 68 0 0 chr18 15566380 15566689 -71110859 + AluY SINE Alu 1 309 -2 2038 54 0 35 chr18 15567104 15567363 -71110185 - AluY SINE Alu -10 301 52 2108 125 0 7 chr18 15567614 15567901 -71109647 + AluSx SINE Alu 23 307 -5 2359 82 10 3 chr18 15569080 15569373 -71108175 - AluSq SINE Alu -18 295 1 285 29 0 0 chr18 15570900 15570934 -71106614 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 2016 143 0 10 chr18 15570934 15571234 -71106314 + AluSx SINE Alu 1 297 -15 21 57 0 0 chr18 15571628 15571663 -71105885 + AT_rich Low_complexity Low_complexity 1 35 0 478 298 0 0 chr18 15571910 15572024 -71105524 - MIR SINE MIR -1 261 148 431 217 62 1 chr18 15572259 15572364 -71105184 - MIR SINE MIR -97 111 2 238 305 21 21 chr18 15572391 15572486 -71105062 - MIR SINE MIR -2 260 166 1564 147 96 7 chr18 15572572 15572844 -71104704 + AluSx SINE Alu 1 296 -16 2246 109 0 3 chr18 15572844 15573147 -71104401 + AluSg1 SINE Alu 1 302 -7 650 224 73 18 chr18 15573447 15573612 -71103936 + MER5A DNA MER1_type 14 187 -2 508 192 15 15 chr18 15573965 15574095 -71103453 - MER20B DNA MER1_type -111 672 543 301 352 66 19 chr18 15574215 15574428 -71103120 - L1ME LINE L1 -378 5743 5521 604 310 81 66 chr18 15575613 15576110 -71101438 - L1ME3A LINE L1 -215 5947 5444 1715 170 27 14 chr18 15576153 15576447 -71101101 - AluJo SINE Alu -14 298 1 1011 184 50 18 chr18 15576923 15577141 -71100407 + L1M4c LINE L1 3 227 -6157 276 299 28 2 chr18 15577228 15577309 -71100239 - MIR SINE MIR -46 162 80 2505 65 0 7 chr18 15577346 15577652 -71099896 - AluY SINE Alu -7 304 1 644 206 29 18 chr18 15577656 15577826 -71099722 + MER104 DNA Tc2 9 180 0 288 284 72 98 chr18 15579019 15579213 -71098335 - MIR SINE MIR -24 238 50 1740 178 19 10 chr18 15579246 15579363 -71098185 + AluJo SINE Alu 1 115 -197 2536 74 6 0 chr18 15579363 15579674 -71097874 + AluSp SINE Alu 1 313 0 1740 178 19 10 chr18 15579674 15579865 -71097683 + AluJo SINE Alu 115 312 0 468 171 0 0 chr18 15580033 15580109 -71097439 - AluSg/x SINE Alu -18 292 217 2090 97 0 4 chr18 15580109 15580376 -71097172 - AluSx SINE Alu -44 268 3 1956 105 72 0 chr18 15580926 15581202 -71096346 + AluSx SINE Alu 1 296 -16 2566 18 0 0 chr18 15581251 15581571 -71095977 + AluY SINE Alu 1 320 0 1927 193 88 47 chr18 15581571 15582080 -71095468 - MER67C LTR ERV1 -107 603 74 279 290 77 34 chr18 15582413 15582550 -71094998 - MIR SINE MIR -60 148 30 204 330 66 0 chr18 15582643 15582734 -71094814 - MIR SINE MIR -163 99 3 * 251 369 30 54 chr18 15582734 15582847 -71094701 + MIR SINE MIR 82 190 -72 922 84 42 12 chr18 15582941 15583107 -71094441 + CT-rich Low_complexity Low_complexity 4 174 0 200 167 0 0 chr18 15583107 15583137 -71094411 + polypyrimidine Low_complexity Low_complexity 4 33 0 1548 188 84 0 chr18 15583141 15583428 -71094120 - AluJb SINE Alu -1 311 1 243 268 57 49 chr18 15583438 15583561 -71093987 - L3b LINE CR1 -115 1468 1345 610 250 108 17 chr18 15583621 15583797 -71093751 - MIR SINE MIR -62 200 9 2288 119 0 3 chr18 15583980 15584291 -71093257 - AluSx SINE Alu -2 310 1 1545 208 10 13 chr18 15584448 15584756 -71092792 - AluJo SINE Alu -5 307 1 189 0 0 0 chr18 15585474 15585495 -71092053 + (T)n Simple_repeat Simple_repeat 1 21 0 982 191 59 80 chr18 15586333 15586441 -71091107 + AluJo SINE Alu 14 123 -189 1374 168 70 37 chr18 15586441 15586617 -71090931 - AluJb SINE Alu -4 308 116 2109 74 52 0 chr18 15586617 15586888 -71090660 + AluY SINE Alu 1 285 -26 1374 168 70 37 chr18 15586888 15587009 -71090539 - AluJb SINE Alu -196 116 1 982 191 59 80 chr18 15587009 15587188 -71090360 + AluJo SINE Alu 123 295 -17 2378 99 0 0 chr18 15587437 15587741 -71089807 - AluSx SINE Alu -8 304 1 22 0 0 0 chr18 15587755 15587777 -71089771 + AT_rich Low_complexity Low_complexity 1 22 0 1076 236 58 17 chr18 15588107 15588454 -71089094 - L1MB8 LINE L1 0 6178 5818 2165 80 70 0 chr18 15588964 15589250 -71088298 - AluY SINE Alu -5 306 1 2239 114 0 0 chr18 15589250 15589548 -71088000 - AluSx SINE Alu -14 298 1 238 240 140 0 chr18 15589632 15589732 -71087816 - L1MB8 LINE L1 -2017 5791 5678 1713 214 119 8 chr18 15589758 15590244 -71087304 - Charlie1a DNA MER1_type 0 1455 916 1162 132 11 26 chr18 15590260 15590449 -71087099 + AluJo SINE Alu 43 228 -84 228 262 16 0 chr18 15590488 15590549 -71086999 - Charlie1a DNA MER1_type -562 893 832 1588 244 31 70 chr18 15590577 15590640 -71086908 - Charlie1a DNA MER1_type -2063 698 634 2326 115 0 0 chr18 15590640 15590944 -71086604 - AluSx SINE Alu -8 304 1 1588 244 31 70 chr18 15590944 15591496 -71086052 - Charlie1a DNA MER1_type -2127 634 107 2053 119 0 18 chr18 15591504 15591789 -71085759 + AluSx SINE Alu 1 280 -32 1728 195 7 3 chr18 15591988 15592290 -71085258 - AluJo SINE Alu -9 303 1 2278 106 10 6 chr18 15592306 15592617 -71084931 - AluSx SINE Alu 0 312 1 396 262 43 24 chr18 15592649 15592813 -71084735 - L1MC5 LINE L1 -51 7910 7744 1595 169 6 42 chr18 15593340 15593676 -71083872 - AluJo SINE Alu 0 312 3 2464 93 0 0 chr18 15593695 15594005 -71083543 - AluY SINE Alu -1 310 1 2275 121 3 0 chr18 15594227 15594534 -71083014 - AluSq SINE Alu -5 308 1 191 286 100 14 chr18 15595047 15595117 -71082431 + MIR SINE MIR 25 100 -108 491 307 64 32 chr18 15595213 15595558 -71081990 + L1ME4a LINE L1 5608 5963 -158 1317 153 6 138 chr18 15595967 15596102 -71081446 + AluJo SINE Alu 1 152 -160 2272 93 0 13 chr18 15596102 15596403 -71081145 + AluSg SINE Alu 1 297 -13 2346 96 0 0 chr18 15596406 15596697 -71080851 + AluSx SINE Alu 1 291 -21 1317 153 6 138 chr18 15596697 15596717 -71080831 + AluJo SINE Alu 154 175 -137 2105 68 43 7 chr18 15596717 15596998 -71080550 + AluY SINE Alu 1 291 -20 1317 153 6 138 chr18 15596998 15597026 -71080522 + AluJo SINE Alu 175 295 -17 674 106 7 113 chr18 15597026 15597177 -71080371 + AluJb SINE Alu 161 295 -17 279 51 0 0 chr18 15597660 15597699 -71079849 - Alu SINE Alu -13 289 251 334 205 39 13 chr18 15597700 15597778 -71079770 + L1MEc LINE L1 137 216 -6180 1274 233 97 38 chr18 15597821 15597935 -71079613 + L1MEc LINE L1 2364 2470 -3745 1786 166 17 3 chr18 15597935 15598224 -71079324 - AluJo SINE Alu -19 293 1 342 0 0 0 chr18 15598230 15598268 -71079280 + (TTA)n Simple_repeat Simple_repeat 3 40 0 1274 233 97 38 chr18 15598268 15598652 -71078896 + L1MEc LINE L1 2474 2899 -3316 428 196 21 0 chr18 15598654 15598751 -71078797 + FLAM_A SINE Alu 43 141 -1 250 189 63 9 chr18 15598753 15598864 -71078684 + L1MEc LINE L1 3176 3292 -2923 645 101 0 30 chr18 15598902 15599001 -71078547 + AluS SINE Alu 2 97 -215 353 206 11 0 chr18 15599005 15599097 -71078451 + GA-rich Low_complexity Low_complexity 2 94 0 925 75 17 0 chr18 15599097 15599217 -71078331 + AluSg SINE Alu 1 122 -188 807 270 4 4 chr18 15599344 15599592 -71077956 + L1MB8 LINE L1 2362 2609 -3537 228 35 0 0 chr18 15599593 15599622 -71077926 + (TG)n Simple_repeat Simple_repeat 2 30 0 2543 78 3 0 chr18 15599627 15599936 -71077612 - AluSp SINE Alu -3 310 1 1013 188 0 0 chr18 15599944 15600098 -71077450 - AluJb SINE Alu -25 287 134 1904 167 0 0 chr18 15600107 15600400 -71077148 + AluSq SINE Alu 13 305 -8 2312 211 22 10 chr18 15600400 15600992 -71076556 + L1MB8 LINE L1 2622 3223 -2923 2181 122 0 0 chr18 15600992 15601280 -71076268 + AluSg SINE Alu 1 288 -22 746 223 0 0 chr18 15601289 15601428 -71076120 - FRAM SINE Alu -38 138 1 296 233 42 25 chr18 15601429 15601544 -71076004 - L1 LINE L1 -2806 3340 3223 2365 94 0 3 chr18 15601544 15601843 -71075705 + AluY SINE Alu 1 298 -13 820 103 0 26 chr18 15601853 15601970 -71075578 - AluSg/x SINE Alu -9 301 188 2087 110 3 14 chr18 15601970 15602252 -71075296 + AluSg SINE Alu 13 291 -19 539 185 19 0 chr18 15602252 15602360 -71075188 + L1MB8 LINE L1 4484 4593 -1553 402 151 0 0 chr18 15602398 15602471 -71075077 + CT-rich Low_complexity Low_complexity 3 75 0 1091 217 99 31 chr18 15602472 15602817 -71074731 + L1MB8 LINE L1 4613 4994 -1152 1662 215 3 3 chr18 15602817 15603119 -71074429 - AluJo SINE Alu -10 302 1 1091 217 99 31 chr18 15603119 15603197 -71074351 + L1MB8 LINE L1 4994 5065 -1081 2069 159 0 0 chr18 15603217 15603507 -71074041 + AluSx SINE Alu 1 290 -22 * 2227 47 65 4 chr18 15603506 15603781 -71073767 + AluY SINE Alu 19 310 -1 1186 196 66 28 chr18 15603789 15604106 -71073442 + L1MB8 LINE L1 5844 6172 -6 2406 157 89 98 chr18 15604111 15604794 -71072754 + L1MB7 LINE L1 5321 5997 -187 679 158 30 15 chr18 15605121 15605254 -71072294 + AluJo SINE Alu 2 136 -176 2285 115 0 3 chr18 15605254 15605559 -71071989 + AluSx SINE Alu 1 304 -8 1746 149 3 55 chr18 15605561 15605704 -71071844 + AluSg1 SINE Alu 2 122 -187 2600 65 0 0 chr18 15605704 15606010 -71071538 + AluY SINE Alu 1 306 -5 1746 149 3 55 chr18 15606010 15606174 -71071374 + AluSg1 SINE Alu 122 293 -16 2348 100 0 10 chr18 15606283 15606594 -71070954 - AluY SINE Alu -1 310 3 2007 101 45 3 chr18 15606596 15606882 -71070666 - AluSx SINE Alu -14 298 1 2028 159 0 3 chr18 15606970 15607278 -71070270 + AluSx SINE Alu 1 307 -5 1819 167 39 0 chr18 15607483 15607764 -71069784 - AluJo SINE Alu -20 292 1 2067 89 64 4 chr18 15608649 15608930 -71068618 - AluSq SINE Alu -15 298 1 1283 190 3 100 chr18 15609002 15609190 -71068358 - AluJo SINE Alu -12 290 144 2252 101 0 14 chr18 15609190 15609487 -71068061 + AluSc SINE Alu 1 293 -16 1283 190 3 100 chr18 15609487 15609619 -71067929 - AluJo SINE Alu -158 144 1 282 350 34 0 chr18 15610291 15610408 -71067140 - L2 LINE L2 -1 3271 3151 331 354 8 8 chr18 15610419 15610546 -71067002 - MER5A DNA MER1_type -6 183 57 356 324 159 6 chr18 15610856 15611038 -71066510 - MIR SINE MIR -41 221 12 234 0 0 0 chr18 15611052 15611078 -71066470 + (T)n Simple_repeat Simple_repeat 1 26 0 288 0 0 0 chr18 15611277 15611309 -71066239 + (A)n Simple_repeat Simple_repeat 1 32 0 322 226 22 4 chr18 15611310 15611365 -71066183 + (TA)n Simple_repeat Simple_repeat 1 54 -481 1793 183 3 0 chr18 15611365 15611655 -71065893 - AluJo SINE Alu -21 291 1 322 226 22 4 chr18 15611655 15611836 -71065712 + (TA)n Simple_repeat Simple_repeat 54 535 0 305 213 66 123 chr18 15611840 15611962 -71065586 - L1MC4 LINE L1 -1339 6703 6589 828 170 9 77 chr18 15612023 15612087 -71065461 + L1M4c LINE L1 2320 2387 -3995 2043 157 0 0 chr18 15612087 15612387 -71065161 + AluJb SINE Alu 1 300 -12 828 170 9 77 chr18 15612387 15612585 -71064963 + L1M4c LINE L1 2387 2562 -3820 2239 89 24 3 chr18 15612585 15612877 -71064671 + AluY SINE Alu 1 298 -13 828 170 9 77 chr18 15612877 15612925 -71064623 + L1M4c LINE L1 2562 2612 -3770 2429 106 0 0 chr18 15612925 15613236 -71064312 + AluSx SINE Alu 1 311 -1 2219 95 7 13 chr18 15613365 15613670 -71063878 - AluSg SINE Alu -2 308 6 2248 120 3 0 chr18 15613674 15613973 -71063575 - AluSx SINE Alu -12 300 1 293 328 116 11 chr18 15614183 15614626 -71062922 - L2 LINE L2 -1005 2309 1752 2662 46 0 0 chr18 15615359 15615663 -71061885 - AluY SINE Alu -7 304 1 25 0 0 0 chr18 15615665 15615690 -71061858 + AT_rich Low_complexity Low_complexity 1 25 0 1767 190 36 22 chr18 15616667 15616970 -71060578 + MLT1A1 LTR MaLR 1 311 -54 883 79 79 0 chr18 15616970 15617097 -71060451 + MER85 DNA T2_type 3 139 0 1767 190 36 22 chr18 15617097 15617151 -71060397 + MLT1A1 LTR MaLR 311 363 -2 422 157 12 0 chr18 15617186 15617269 -71060279 + CT-rich Low_complexity Low_complexity 3 86 0 2085 153 0 3 chr18 15617289 15617602 -71059946 - AluSx SINE Alu 0 312 1 2331 102 3 0 chr18 15617968 15618261 -71059287 + AluSx SINE Alu 1 294 -18 226 297 58 45 chr18 15618290 15618445 -71059103 - L2 LINE L2 -2600 714 558 364 298 29 18 chr18 15618596 15618767 -71058781 + MER5B DNA MER1_type 4 176 -2 320 167 17 0 chr18 15618816 15618876 -71058672 + U7 snRNA snRNA 1 61 -2 1704 125 52 37 chr18 15618950 15619222 -71058326 + AluJo SINE Alu 7 282 -30 2486 81 0 7 chr18 15619222 15619529 -71058019 - AluSx SINE Alu -7 305 1 2270 87 40 0 chr18 15619556 15619854 -71057694 + AluSg SINE Alu 1 310 0 396 274 64 13 chr18 15620518 15620675 -71056873 - MER5A DNA MER1_type -4 185 21 633 169 0 77 chr18 15620860 15620990 -71056558 + AluJo SINE Alu 6 125 -187 339 179 0 0 chr18 15620990 15621057 -71056491 + GA-rich Low_complexity Low_complexity 3 69 0 874 156 0 72 chr18 15621073 15621253 -71056295 + AluJo SINE Alu 129 295 -17 2274 76 40 23 chr18 15621446 15621747 -71055801 + AluSq SINE Alu 1 306 -7 2055 93 4 0 chr18 15621895 15622153 -71055395 - AluSx SINE Alu -53 259 1 22 0 0 0 chr18 15622167 15622189 -71055359 + AT_rich Low_complexity Low_complexity 1 22 0 229 253 71 10 chr18 15622298 15622397 -71055151 - MER105 DNA DNA -80 124 20 1128 247 53 12 chr18 15622526 15622866 -71054682 - L1MB7 LINE L1 -13 6171 5818 2114 125 0 7 chr18 15623376 15623663 -71053885 - AluSx SINE Alu -5 307 23 1872 84 0 38 chr18 15623914 15624175 -71053373 + AluY SINE Alu 52 302 -9 2122 142 0 0 chr18 15624179 15624474 -71053074 + AluJb SINE Alu 1 295 -17 2166 131 3 16 chr18 15624476 15624789 -71052759 + AluSc SINE Alu 1 309 0 2564 58 0 0 chr18 15624794 15625088 -71052460 + AluY SINE Alu 1 294 -17 2052 153 16 0 chr18 15625936 15626243 -71051305 + AluSx SINE Alu 1 312 0 591 120 28 51 chr18 15628787 15629587 -71047961 + (TG)n Simple_repeat Simple_repeat 1 781 0 325 198 206 8 chr18 15630934 15631060 -71046488 - L1ME3A LINE L1 -53 6117 5967 1482 157 55 20 chr18 15631072 15631327 -71046221 - AluJo SINE Alu -16 296 33 988 135 39 0 chr18 15631327 15631483 -71046065 - AluSg/x SINE Alu -6 304 143 2348 102 0 0 chr18 15631490 15631785 -71045763 - AluSg SINE Alu -15 295 1 201 367 13 0 chr18 15632039 15632118 -71045430 - L2 LINE L2 0 3272 3193 216 350 110 5 chr18 15633397 15633597 -71043951 + MIR SINE MIR 2 222 -40 264 216 0 0 chr18 15633912 15633963 -71043585 + MER3 DNA MER1_type 40 90 -119 * 805 193 14 90 chr18 15633924 15633986 -71043562 - MER3 DNA MER1_type -4 205 140 2094 84 46 32 chr18 15633986 15634270 -71043278 + AluSq SINE Alu 7 294 -19 805 193 14 90 chr18 15634270 15634419 -71043129 - MER3 DNA MER1_type -69 140 10 2523 60 0 38 chr18 15634467 15634782 -71042766 + AluY SINE Alu 1 303 -8 2122 142 0 0 chr18 15634786 15635081 -71042467 + AluJb SINE Alu 1 295 -17 2166 131 3 16 chr18 15635083 15635396 -71042152 + AluSc SINE Alu 1 309 0 2564 58 0 0 chr18 15635401 15635695 -71041853 + AluY SINE Alu 1 294 -17 2052 153 16 0 chr18 15636543 15636850 -71040698 + AluSx SINE Alu 1 312 0 591 120 28 51 chr18 15639394 15640194 -71037354 + (TG)n Simple_repeat Simple_repeat 1 781 0 26 0 0 0 chr18 15640586 15640612 -71036936 + GC_rich Low_complexity Low_complexity 1 26 0 186 43 0 0 chr18 15642408 15642431 -71035117 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1162 186 59 21 chr18 15642448 15642551 -71034997 - AluJo SINE Alu -58 254 156 2514 49 3 16 chr18 15642551 15642857 -71034691 - AluY SINE Alu -9 302 1 1162 186 59 21 chr18 15642857 15642990 -71034558 - AluJo SINE Alu -156 156 9 195 320 135 19 chr18 15644113 15644269 -71033279 + MIR SINE MIR 77 250 -12 837 114 32 63 chr18 15644467 15644501 -71033047 - L1PB4 LINE L1 -5 6151 6117 2250 104 0 13 chr18 15644501 15644808 -71032740 - AluSx SINE Alu -9 303 1 837 114 32 63 chr18 15644808 15644931 -71032617 - L1PB4 LINE L1 -39 6117 5999 794 173 81 0 chr18 15644933 15645106 -71032442 - L1PB4 LINE L1 -353 5803 5617 937 192 6 0 chr18 15645286 15645453 -71032095 + FRAM SINE Alu 9 176 0 1542 148 36 68 chr18 15645453 15645647 -71031901 - L1PB4 LINE L1 -571 5585 5386 2190 129 0 0 chr18 15645647 15645950 -71031598 - AluSg SINE Alu -7 303 1 1542 148 36 68 chr18 15645950 15645980 -71031568 - L1PB4 LINE L1 -770 5386 5357 1785 175 3 13 chr18 15645980 15646294 -71031254 + AluJb SINE Alu 1 311 -1 1542 148 36 68 chr18 15646294 15646499 -71031049 - L1PB4 LINE L1 -799 5357 5166 2213 106 0 10 chr18 15646522 15646814 -71030734 - AluY SINE Alu -22 289 1 355 235 30 83 chr18 15647335 15647467 -71030081 - L2 LINE L2 -2 3311 3187 245 273 182 50 chr18 15647556 15647776 -71029772 + L3 LINE CR1 1261 1509 -68 204 225 0 0 chr18 15648594 15648634 -71028914 - L3 LINE CR1 -15 1562 1523 202 225 0 0 chr18 15648600 15648640 -71028908 - MIR3 SINE MIR -25 183 144 * 2353 92 3 0 chr18 15648643 15648949 -71028599 - AluSp SINE Alu -5 308 2 2070 128 0 3 chr18 15649452 15649741 -71027807 + AluSx SINE Alu 1 288 -24 207 0 0 0 chr18 15649744 15649767 -71027781 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1495 141 23 62 chr18 15649783 15650087 -71027461 + AluJo SINE Alu 1 292 -20 2219 56 19 75 chr18 15650097 15650419 -71027129 + AluSp SINE Alu 5 308 -5 2030 107 0 0 chr18 15651157 15651419 -71026129 - AluSx SINE Alu -50 262 1 917 142 0 8 chr18 15651455 15651589 -71025959 - FLAM_C SINE Alu 0 133 1 2006 109 39 3 chr18 15651768 15652052 -71025496 - AluSq SINE Alu -19 294 1 10990 103 67 87 chr18 15652550 15653880 -71023668 - Tigger1 DNA MER2_type -351 2067 628 984 161 0 19 chr18 15653880 15654042 -71023506 - FRAM SINE Alu -7 169 11 10990 103 67 87 chr18 15654042 15654632 -71022916 - Tigger1 DNA MER2_type -1790 628 28 1635 105 5 0 chr18 15655123 15655342 -71022206 - AluSg/x SINE Alu -2 308 89 709 92 0 0 chr18 15655350 15655437 -71022111 + AluSq SINE Alu 121 207 -106 403 241 0 0 chr18 15655431 15655510 -71022038 - FLAM_A SINE Alu -53 79 1 * 27 49 0 0 chr18 15657744 15657785 -71019763 + AT_rich Low_complexity Low_complexity 1 41 0 1859 122 68 14 chr18 15659219 15659514 -71018034 + AluSq SINE Alu 1 311 -2 240 233 0 0 chr18 15660104 15660177 -71017371 + GA-rich Low_complexity Low_complexity 3 75 0 2356 87 0 3 chr18 15662560 15662860 -71014688 - AluY SINE Alu -12 299 1 2248 108 0 0 chr18 15662921 15663209 -71014339 - AluSc SINE Alu -21 288 1 2210 117 0 7 chr18 15664065 15664364 -71013184 - AluJb SINE Alu -15 297 1 1993 134 24 0 chr18 15665967 15666257 -71011291 - AluSx SINE Alu -15 297 1 2570 68 0 0 chr18 15666957 15667268 -71010280 - AluY SINE Alu 0 311 1 2469 68 0 10 chr18 15667454 15667765 -71009783 + AluY SINE Alu 1 308 -3 2360 84 3 0 chr18 15669555 15669851 -71007697 + AluSp SINE Alu 1 297 -16 257 196 0 0 chr18 15670527 15670578 -71006970 + L1MC4 LINE L1 6653 6703 -1339 233 301 0 54 chr18 15670588 15670681 -71006867 - L1MC4 LINE L1 -1339 6703 6616 243 232 0 0 chr18 15670705 15670761 -71006787 - L1MC4 LINE L1 -1339 6703 6648 1502 192 3 21 chr18 15670764 15671055 -71006493 - AluJo SINE Alu -24 288 3 1596 190 3 21 chr18 15672036 15672326 -71005222 - AluJo SINE Alu -27 285 1 513 274 37 32 chr18 15674254 15674310 -71003238 + MIR SINE MIR 46 100 -162 1334 190 88 0 chr18 15674310 15674584 -71002964 - AluJo SINE Alu -14 298 1 513 274 37 32 chr18 15674584 15674717 -71002831 + MIR SINE MIR 100 236 -26 373 274 104 0 chr18 15674772 15674878 -71002670 + L2 LINE L2 3197 3313 0 2275 119 0 0 chr18 15674935 15675245 -71002303 + AluSg SINE Alu 1 310 0 2183 97 0 17 chr18 15675421 15675711 -71001837 - AluSg SINE Alu -25 285 1 24 0 0 0 chr18 15675813 15675837 -71001711 + AT_rich Low_complexity Low_complexity 1 24 0 1039 109 0 0 chr18 15675837 15675975 -71001573 - L1PA10 LINE L1 0 6168 6031 2285 97 7 10 chr18 15676129 15676438 -71001110 + AluSx SINE Alu 1 308 -4 2209 110 10 0 chr18 15676801 15677102 -71000446 + AluSp SINE Alu 1 304 -9 27 100 0 0 chr18 15677506 15677596 -70999952 + AT_rich Low_complexity Low_complexity 1 90 0 565 158 87 8 chr18 15678165 15678292 -70999256 + MER3 DNA MER1_type 65 201 -8 379 261 6 30 chr18 15679172 15679337 -70998211 + (TG)n Simple_repeat Simple_repeat 1 161 0 289 220 0 27 chr18 15679380 15679532 -70998016 + (TG)n Simple_repeat Simple_repeat 1 147 0 209 216 0 0 chr18 15679995 15680032 -70997516 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 2057 155 3 0 chr18 15680034 15680344 -70997204 - AluJo SINE Alu 0 312 2 307 259 6 6 chr18 15680959 15681056 -70996492 - MIR3 SINE MIR -14 194 97 409 193 117 62 chr18 15681340 15681485 -70996063 + MIR SINE MIR 110 262 0 1604 81 0 0 chr18 15681919 15682116 -70995432 + AluSq SINE Alu 1 197 -116 24 77 0 0 chr18 15682307 15682359 -70995189 + AT_rich Low_complexity Low_complexity 1 52 0 203 220 34 0 chr18 15682398 15682457 -70995091 + GA-rich Low_complexity Low_complexity 1 61 0 2215 89 7 7 chr18 15683021 15683314 -70994234 - AluSc SINE Alu -16 293 1 189 0 0 0 chr18 15683337 15683358 -70994190 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2001 119 0 60 chr18 15683811 15684129 -70993419 - AluJb SINE Alu -11 301 3 21 0 0 0 chr18 15684437 15684458 -70993090 + AT_rich Low_complexity Low_complexity 1 21 0 813 136 0 0 chr18 15685647 15685765 -70991783 + AluJb SINE Alu 1 118 -194 207 0 0 0 chr18 15685772 15685795 -70991753 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr18 15685808 15685836 -70991712 + AT_rich Low_complexity Low_complexity 1 28 0 2276 87 0 7 chr18 15685978 15686278 -70991270 - AluY SINE Alu -13 298 1 1097 186 93 22 chr18 15687402 15687628 -70989920 + MIR SINE MIR 5 246 -16 1263 171 73 43 chr18 15687630 15687728 -70989820 + MER44D DNA MER2_type 3 97 -2394 2115 134 0 0 chr18 15687728 15688026 -70989522 - AluSx SINE Alu -14 298 1 1263 171 73 43 chr18 15688026 15688254 -70989294 + MER44D DNA MER2_type 97 609 0 2078 93 53 30 chr18 15688263 15688565 -70988983 - AluSg SINE Alu -1 309 1 422 152 40 40 chr18 15688614 15688713 -70988835 + L1MB7 LINE L1 6077 6175 -9 2378 71 0 10 chr18 15689777 15690074 -70987474 + AluY SINE Alu 1 294 -17 304 291 101 28 chr18 15690491 15690670 -70986878 + L1ME4a LINE L1 5717 5908 -213 5221 175 168 1 chr18 15691187 15692369 -70985179 + L1 LINE L1 3478 4856 -1290 603 194 28 0 chr18 15692370 15692478 -70985070 - FRAM SINE Alu -9 167 57 255 332 100 36 chr18 15692525 15692745 -70984803 - L2 LINE L2 -25 3247 3014 357 293 8 38 chr18 15693540 15693673 -70983875 - MIR SINE MIR -70 192 64 2158 101 0 0 chr18 15694303 15694580 -70982968 - AluSx SINE Alu -35 277 1 422 262 0 0 chr18 15694583 15694667 -70982881 - FRAM/FAM SINE Alu -93 83 1 1801 159 0 26 chr18 15694768 15695076 -70982472 - AluJo SINE Alu -2 310 11 380 339 62 8 chr18 15695152 15695282 -70982266 - MIR SINE MIR -106 156 20 267 244 13 26 chr18 15695288 15695366 -70982182 + AluJ/FRAM SINE Alu 220 296 -6 2584 40 0 40 chr18 15695421 15695743 -70981805 + AluY SINE Alu 1 309 -2 876 59 25 8 chr18 15695744 15695862 -70981686 + AluY SINE Alu 103 222 -89 272 240 0 10 chr18 15696264 15696360 -70981188 + (TG)n Simple_repeat Simple_repeat 2 96 0 21 36 0 0 chr18 15696501 15696529 -70981019 + AT_rich Low_complexity Low_complexity 1 28 0 509 167 0 33 chr18 15696533 15696766 -70980782 + AluJo SINE Alu 2 286 -26 206 276 118 33 chr18 15696836 15696987 -70980561 - MIR SINE MIR -63 145 20 617 294 161 26 chr18 15698030 15698537 -70979011 + L2 LINE L2 2728 3308 -5 420 264 101 71 chr18 15698705 15699042 -70978506 - L3 LINE CR1 -66 1511 1165 3118 158 54 20 chr18 15699149 15699758 -70977790 + L1MB4 LINE L1 5550 6179 -1 262 102 102 20 chr18 15699931 15699980 -70977568 + MER5A DNA MER1_type 9 61 -128 2095 94 4 7 chr18 15700025 15700300 -70977248 - AluSg SINE Alu -8 302 29 3556 165 63 18 chr18 15700610 15701289 -70976259 + L1MB8 LINE L1 5464 6173 -5 2133 75 7 11 chr18 15701875 15702155 -70975393 - AluY SINE Alu -32 279 1 325 200 44 0 chr18 15702157 15702247 -70975301 + L1ME2 LINE L1 4977 5070 -1076 284 57 0 0 chr18 15702392 15702427 -70975121 + U2 snRNA snRNA 1 35 -153 2971 193 73 46 chr18 15702427 15703336 -70974212 + L1ME2 LINE L1 5153 6164 0 344 167 61 15 chr18 15703425 15703491 -70974057 + MLT1A2 LTR MaLR 321 374 0 402 21 0 0 chr18 15703896 15703943 -70973605 + (CA)n Simple_repeat Simple_repeat 2 48 0 1634 216 60 3 chr18 15703986 15704356 -70973192 + L1MB4 LINE L1 5783 6173 -7 261 272 120 0 chr18 15704630 15704722 -70972826 + L2 LINE L2 1954 2056 -1258 492 181 142 13 chr18 15704847 15705002 -70972546 - L2 LINE L2 -1827 1487 1313 2369 92 0 0 chr18 15705039 15705333 -70972215 - AluSx SINE Alu -18 294 1 436 151 96 0 chr18 15705479 15705552 -70971996 + AluJ/FLAM SINE Alu 3 82 -230 181 250 0 0 chr18 15705738 15705774 -70971774 + L2 LINE L2 3255 3290 -23 2127 120 7 0 chr18 15706291 15706582 -70970966 + AluSx SINE Alu 1 293 -19 497 233 0 19 chr18 15707375 15707478 -70970070 + MER5B DNA MER1_type 60 160 -18 324 252 0 156 chr18 15707496 15707631 -70969917 - L2 LINE L2 -1 3312 3199 376 245 93 22 chr18 15707652 15707791 -70969757 - MER102b DNA MER1_type -51 290 142 644 164 15 52 chr18 15707897 15708031 -70969517 + AluJo/FLAM SINE Alu 1 129 -173 2378 102 0 0 chr18 15708031 15708336 -70969212 + AluSc SINE Alu 1 305 -4 1702 184 6 16 chr18 15708351 15708666 -70968882 + AluJo SINE Alu 1 312 0 489 258 146 60 chr18 15708685 15708857 -70968691 + L1M4 LINE L1 2163 2319 -3827 2311 110 0 0 chr18 15708857 15709158 -70968390 + AluSx SINE Alu 1 301 -11 489 258 146 60 chr18 15709158 15709354 -70968194 + L1M4 LINE L1 2319 2563 -3583 713 200 8 23 chr18 15709358 15709488 -70968060 + FLAM_A SINE Alu 1 128 -5 22 0 0 30 chr18 15709488 15709501 -70968047 + AT_rich Low_complexity Low_complexity 1 13 -19 2081 80 0 83 chr18 15709501 15709813 -70967735 - AluSg SINE Alu -24 286 1 22 0 0 30 chr18 15709813 15709832 -70967716 + AT_rich Low_complexity Low_complexity 13 32 0 670 283 67 9 chr18 15710144 15710367 -70967181 + MIR SINE MIR 27 262 0 237 65 0 0 chr18 15710644 15710675 -70966873 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1915 151 0 11 chr18 15710678 15710963 -70966585 - AluJo SINE Alu -30 282 1 1965 138 11 0 chr18 15711885 15712168 -70965380 - AluSx SINE Alu -24 288 3 569 262 30 18 chr18 15713105 15713317 -70964231 - L1ME4a LINE L1 -232 5889 5673 336 271 84 24 chr18 15713314 15713480 -70964068 - L1ME LINE L1 -385 5736 5561 * 1387 159 85 15 chr18 15713488 15713615 -70963933 + AluJo SINE Alu 1 118 -194 2128 120 0 7 chr18 15713615 15713898 -70963650 + AluSx SINE Alu 1 281 -31 1387 159 85 15 chr18 15713898 15714041 -70963507 + AluJo SINE Alu 118 290 -22 1813 160 7 7 chr18 15714048 15714342 -70963206 + AluJb SINE Alu 8 301 -11 639 164 190 0 chr18 15714422 15714538 -70963010 - FLAM_C SINE Alu -4 139 2 349 316 91 16 chr18 15714548 15714625 -70962923 - MIR SINE MIR -55 207 137 2036 147 7 0 chr18 15714625 15714932 -70962616 + AluSx SINE Alu 1 309 -3 349 316 91 16 chr18 15714932 15715041 -70962507 - MIR SINE MIR -125 137 7 2070 125 6 16 chr18 15715088 15715400 -70962148 + AluSx SINE Alu 1 309 -3 2360 84 3 0 chr18 15717190 15717486 -70960062 + AluSp SINE Alu 1 297 -16 238 163 41 0 chr18 15718162 15718211 -70959337 + L1MC4 LINE L1 6653 6703 -1339 314 271 9 0 chr18 15718223 15718330 -70959218 + (TACG)n Simple_repeat Simple_repeat 4 111 0 243 232 0 0 chr18 15718332 15718388 -70959160 - L1MC4 LINE L1 -1339 6703 6648 1502 192 3 21 chr18 15718391 15718682 -70958866 - AluJo SINE Alu -24 288 3 267 105 0 0 chr18 15718959 15718997 -70958551 - Alu SINE Alu -263 39 2 1164 168 21 116 chr18 15719131 15719241 -70958307 - MER33 DNA MER1_type -2263 322 203 1697 181 0 19 chr18 15719241 15719555 -70957993 - AluJo SINE Alu -4 308 1 1164 168 21 116 chr18 15719555 15719632 -70957916 - MER33 DNA MER1_type -2382 203 120 1927 128 32 3 chr18 15719632 15719914 -70957634 - AluSx SINE Alu -22 290 1 1164 168 21 116 chr18 15719914 15720053 -70957495 - MER33 DNA MER1_type -2465 120 26 1007 297 62 37 chr18 15720371 15720852 -70956696 - L2 LINE L2 -12 3301 2809 499 243 243 0 chr18 15720859 15721003 -70956545 - MER5A DNA MER1_type -1 188 10 1412 193 48 108 chr18 15721040 15721521 -70956027 - L2 LINE L2 -1102 2212 1761 2095 213 105 18 chr18 15721525 15721558 -70955990 - MLT1F LTR MaLR 0 542 513 1925 140 3 35 chr18 15721558 15721872 -70955676 + AluJb SINE Alu 1 304 -8 2095 213 105 18 chr18 15721872 15722332 -70955216 - MLT1F LTR MaLR -29 513 6 2946 242 53 24 chr18 15722337 15723239 -70954309 - L2 LINE L2 -1552 1762 835 21 0 0 0 chr18 15723419 15723440 -70954108 + AT_rich Low_complexity Low_complexity 1 21 0 2423 66 3 3 chr18 15723544 15723846 -70953702 - AluY SINE Alu -9 302 1 2208 75 3 41 chr18 15724349 15724642 -70952906 - AluSp SINE Alu -31 282 1 2348 81 10 10 chr18 15724676 15724984 -70952564 + AluY SINE Alu 1 308 -3 25 0 0 0 chr18 15724984 15725009 -70952539 + AT_rich Low_complexity Low_complexity 1 25 0 2200 127 3 0 chr18 15725013 15725320 -70952228 + AluSg SINE Alu 1 308 -2 584 209 25 13 chr18 15725322 15725480 -70952068 + L1M4 LINE L1 4164 4323 -1823 685 183 33 0 chr18 15725480 15725600 -70951948 + FLAM_C SINE Alu 2 125 -8 470 219 35 0 chr18 15725630 15725744 -70951804 + L1M4 LINE L1 4489 4606 -1540 1562 155 125 11 chr18 15726386 15726650 -70950898 + AluJo SINE Alu 1 294 -8 1077 73 0 0 chr18 15727231 15727367 -70950181 + AluSq/x SINE Alu 1 136 -176 2508 74 0 0 chr18 15727367 15727665 -70949883 + AluY SINE Alu 1 298 -13 270 83 21 0 chr18 15727665 15727713 -70949835 + L1MA1 LINE L1 6250 6298 -4 432 340 34 5 chr18 15727931 15728137 -70949411 - L1ME LINE L1 -369 5752 5541 264 248 97 44 chr18 15728239 15728352 -70949196 - MIR SINE MIR -41 221 103 2001 146 65 19 chr18 15728397 15728719 -70948829 - MER1B DNA MER1_type 0 337 1 307 220 220 62 chr18 15728780 15728957 -70948591 - MER63 DNA MER1_type -2 1060 4 860 265 186 42 chr18 15729110 15729630 -70947918 + L2 LINE L2 4 598 -2716 1691 139 60 4 chr18 15729764 15730031 -70947517 - AluJb SINE Alu -30 282 1 2272 100 0 3 chr18 15730303 15730604 -70946944 + AluSq SINE Alu 1 300 -13 2250 107 0 0 chr18 15731296 15731594 -70945954 + AluSg SINE Alu 1 298 -12 3357 166 67 31 chr18 15731612 15732328 -70945220 + L1MB7 LINE L1 5427 6168 -16 1521 174 78 64 chr18 15732824 15733260 -70944288 - MSTB2 LTR MaLR -1 456 15 2221 102 17 0 chr18 15734051 15734346 -70943202 + AluSx SINE Alu 1 300 -12 1562 155 125 11 chr18 15734885 15735149 -70942399 + AluJo SINE Alu 1 294 -8 1956 98 0 82 chr18 15735730 15735866 -70941682 + AluSx SINE Alu 1 147 -165 2529 81 0 0 chr18 15735866 15736175 -70941373 + AluY SINE Alu 1 309 -2 1956 98 0 82 chr18 15736175 15736385 -70941163 + AluSx SINE Alu 147 312 0 22 56 0 0 chr18 15736568 15736604 -70940944 + AT_rich Low_complexity Low_complexity 1 36 0 640 154 331 0 chr18 15737321 15737490 -70940058 - MER46A DNA MER2_type -11 225 1 998 81 0 22 chr18 15737690 15737826 -70939722 - AluSq/x SINE Alu -179 133 1 1495 194 24 7 chr18 15737911 15738200 -70939348 - AluJb SINE Alu -18 294 1 180 0 0 0 chr18 15738201 15738221 -70939327 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 763 165 8 16 chr18 15738221 15738342 -70939206 - FLAM_C SINE Alu -22 121 2 1121 248 88 20 chr18 15738464 15738815 -70938733 - L1MB5 LINE L1 -1174 4972 4598 3521 200 19 29 chr18 15738816 15739206 -70938342 + L1MB5 LINE L1 4943 5336 -838 2100 151 11 22 chr18 15739206 15739570 -70937978 + L1PB4 LINE L1 5797 6156 0 3521 200 19 29 chr18 15739570 15740068 -70937480 + L1MB5 LINE L1 5336 5816 -358 2332 103 3 0 chr18 15740068 15740379 -70937169 + AluSp SINE Alu 2 313 0 3521 200 19 29 chr18 15740379 15740596 -70936952 + L1MB5 LINE L1 5816 6034 -140 2129 113 3 3 chr18 15740659 15740959 -70936589 - AluSc SINE Alu -9 300 1 1725 177 3 7 chr18 15740959 15741241 -70936307 + AluJb SINE Alu 3 284 -28 205 368 26 13 chr18 15741359 15741435 -70936113 + MER5A DNA MER1_type 40 116 -73 356 315 39 97 chr18 15741787 15742095 -70935453 + L1ME4a LINE L1 5511 5800 -2008 2221 111 0 7 chr18 15742107 15742414 -70935134 + AluY SINE Alu 5 309 -2 219 308 98 31 chr18 15742554 15742778 -70934770 + L2 LINE L2 1923 2161 -1153 212 343 152 0 chr18 15742939 15743038 -70934510 + L2 LINE L2 3154 3267 -5 422 223 58 65 chr18 15743260 15743399 -70934149 + MIR3 SINE MIR 25 162 -46 2345 103 0 0 chr18 15743502 15743804 -70933744 + AluSq SINE Alu 1 302 -11 1468 277 27 27 chr18 15744066 15744540 -70933008 - L2 LINE L2 -262 3051 2576 2014 137 0 26 chr18 15744540 15744853 -70932695 + AluJb SINE Alu 1 305 -7 1468 277 27 27 chr18 15744853 15744939 -70932609 - L2 LINE L2 -737 2576 2491 646 261 116 6 chr18 15745031 15745349 -70932199 + L1ME4a LINE L1 5757 6109 -12 32 0 0 0 chr18 15745349 15745381 -70932167 + AT_rich Low_complexity Low_complexity 1 32 0 2163 120 3 3 chr18 15745434 15745735 -70931813 - AluSx SINE Alu -11 301 1 390 282 128 49 chr18 15746148 15746512 -70931036 + MLT1H LTR MaLR 1 376 -33 337 271 136 0 chr18 15746547 15746665 -70930883 + MIR SINE MIR 69 202 -60 2262 121 0 0 chr18 15746694 15747000 -70930548 + AluSx SINE Alu 1 306 -6 2412 94 0 3 chr18 15747142 15747451 -70930097 + AluSc SINE Alu 1 308 -1 2095 120 3 7 chr18 15747953 15748252 -70929296 - AluSq SINE Alu -15 298 1 1488 199 42 83 chr18 15748912 15749078 -70928470 + L1ME1 LINE L1 5724 5895 -271 2430 81 0 7 chr18 15749078 15749386 -70928162 + AluSx SINE Alu 1 306 -6 1488 199 42 83 chr18 15749386 15749677 -70927871 + L1ME1 LINE L1 5895 6162 -4 2138 95 20 10 chr18 15749822 15750117 -70927431 - AluSx SINE Alu -14 298 1 188 378 71 20 chr18 15750285 15750383 -70927165 + L2 LINE L2 3121 3223 -49 2185 160 21 6 chr18 15750485 15750817 -70926731 + MER1B DNA MER1_type 1 337 0 1774 143 3 88 chr18 15751001 15751330 -70926218 - AluJo SINE Alu -11 301 1 2076 103 3 72 chr18 15751360 15751679 -70925869 + AluSx SINE Alu 1 297 -15 201 74 0 0 chr18 15752043 15752070 -70925478 + (T)n Simple_repeat Simple_repeat 1 27 0 2130 110 3 0 chr18 15752767 15753092 -70924456 - AluSp SINE Alu 0 326 1 1485 206 14 3 chr18 15753112 15753403 -70924145 - AluJb SINE Alu -12 300 7 598 333 56 51 chr18 15753430 15753824 -70923724 + L2 LINE L2 2918 3313 0 1820 163 3 10 chr18 15754502 15754803 -70922745 + AluJo SINE Alu 1 299 -13 1236 273 60 15 chr18 15754864 15755267 -70922281 + LTR16A LTR ERVL 16 436 -14 309 235 61 83 chr18 15755484 15755616 -70921932 + MLT1K LTR MaLR 103 231 -357 593 251 18 35 chr18 15755738 15755909 -70921639 + MLT1K LTR MaLR 405 572 -16 316 333 35 35 chr18 15756286 15756484 -70921064 + MIR SINE MIR 64 261 -1 22 35 0 0 chr18 15757122 15757151 -70920397 + AT_rich Low_complexity Low_complexity 1 29 0 1713 175 11 0 chr18 15757298 15757578 -70919970 - AluJb SINE Alu -28 284 2 541 274 9 0 chr18 15757616 15757729 -70919819 + AluJb SINE Alu 137 250 -62 957 155 0 128 chr18 15757729 15757987 -70919561 + AluJo SINE Alu 85 309 -3 216 182 0 0 chr18 15758603 15758647 -70918901 + (CA)n Simple_repeat Simple_repeat 2 45 0 1263 299 127 3 chr18 15758872 15759441 -70918107 + L1MC4a LINE L1 5257 5895 -1913 14121 116 60 42 chr18 15760556 15760606 -70916942 + Tigger1 DNA MER2_type 1 49 -2369 2057 114 7 13 chr18 15760606 15760905 -70916643 - AluSx SINE Alu -15 297 1 14121 116 60 42 chr18 15760905 15762954 -70914594 + Tigger1 DNA MER2_type 49 2152 -266 811 216 68 0 chr18 15762954 15763116 -70914432 - FAM SINE Alu -1 174 2 14121 116 60 42 chr18 15763116 15763388 -70914160 + Tigger1 DNA MER2_type 2152 2417 -1 1493 189 30 27 chr18 15763961 15764262 -70913286 + AluJo SINE Alu 1 302 -10 2587 50 0 3 chr18 15764264 15764593 -70912955 + AluY SINE Alu 1 328 0 23 0 0 0 chr18 15764597 15764620 -70912928 + AT_rich Low_complexity Low_complexity 1 23 0 369 0 0 0 chr18 15765327 15765368 -70912180 + (CA)n Simple_repeat Simple_repeat 2 42 0 316 323 133 57 chr18 15765540 15765819 -70911729 + L2 LINE L2 2914 3213 -59 294 293 41 32 chr18 15765819 15765942 -70911606 + MIR SINE MIR 137 260 -2 2258 97 3 19 chr18 15765972 15766282 -70911266 - AluSc SINE Alu -4 305 1 210 272 201 30 chr18 15766320 15766489 -70911059 - L3 LINE CR1 -238 1339 1142 28 48 0 0 chr18 15766811 15766853 -70910695 + AT_rich Low_complexity Low_complexity 1 42 0 2397 62 31 0 chr18 15767059 15767347 -70910201 + AluY SINE Alu 1 297 -14 361 286 122 96 chr18 15767514 15767891 -70909657 - L2 LINE L2 -79 3193 2807 425 310 94 27 chr18 15768150 15768362 -70909186 - L2 LINE L2 -1 3312 3073 2498 61 0 3 chr18 15768362 15768658 -70908890 + AluY SINE Alu 1 295 -16 425 310 94 27 chr18 15768658 15768742 -70908806 - L2 LINE L2 -240 3073 2996 1106 163 237 29 chr18 15769646 15769891 -70907657 - AluJo SINE Alu -6 296 1 24 53 0 0 chr18 15770013 15770051 -70907497 + AT_rich Low_complexity Low_complexity 1 38 0 825 173 0 0 chr18 15770342 15770475 -70907073 - FLAM_C SINE Alu 0 133 1 216 239 296 0 chr18 15770859 15770930 -70906618 + MIR SINE MIR 105 196 -66 481 210 30 10 chr18 15772700 15772800 -70904748 - U13 snRNA snRNA -2 102 1 369 0 0 0 chr18 15773207 15773248 -70904300 + (CA)n Simple_repeat Simple_repeat 2 42 0 21 0 0 0 chr18 15773314 15773335 -70904213 + AT_rich Low_complexity Low_complexity 1 21 0 1160 186 57 49 chr18 15773661 15773925 -70903623 + MLT2B3 LTR ERVL 1 266 -288 809 153 0 0 chr18 15773923 15774047 -70903501 + MLT2B3 LTR ERVL 385 508 -46 * 516 173 25 0 chr18 15774053 15774134 -70903414 - FLAM_A SINE Alu -59 83 1 385 109 0 0 chr18 15774149 15774204 -70903344 + MLT2B3 LTR ERVL 461 515 0 244 256 81 0 chr18 15774211 15774297 -70903251 - MIR SINE MIR -5 257 165 23 0 0 0 chr18 15774316 15774339 -70903209 + AT_rich Low_complexity Low_complexity 1 23 0 2166 134 0 0 chr18 15774953 15775258 -70902290 + AluSg SINE Alu 1 305 -5 413 295 80 72 chr18 15775521 15775758 -70901790 - MIR SINE MIR -2 260 22 326 236 5 62 chr18 15776645 15776837 -70900711 + MER112 DNA MER1_type 1 259 -1 1557 239 67 15 chr18 15776856 15777333 -70900215 + L1M4 LINE L1 4194 4695 -1451 469 279 25 0 chr18 15777335 15777457 -70900091 - MIR SINE MIR -133 129 5 303 301 48 0 chr18 15777602 15777685 -70899863 + MIR3 SINE MIR 81 167 -41 453 301 123 8 chr18 15777740 15777976 -70899572 + L2 LINE L2 2115 2377 -937 747 174 0 0 chr18 15777980 15778089 -70899459 - FLAM_A SINE Alu -33 109 1 667 256 117 40 chr18 15778092 15778365 -70899183 + L2 LINE L2 2455 2748 -566 279 326 136 45 chr18 15778364 15778436 -70899112 - L2 LINE L2 -2 3311 3247 * 2379 98 75 26 chr18 15778436 15778783 -70898765 + THE1B LTR MaLR 1 364 0 279 326 136 45 chr18 15778783 15778845 -70898703 - L2 LINE L2 -66 3247 3192 369 62 0 0 chr18 15778845 15778893 -70898655 + (CA)n Simple_repeat Simple_repeat 2 49 0 279 326 136 45 chr18 15778893 15778925 -70898623 - L2 LINE L2 -121 3192 3164 2223 113 13 7 chr18 15778925 15779235 -70898313 + AluSx SINE Alu 1 312 0 279 326 136 45 chr18 15779235 15779397 -70898151 - L2 LINE L2 -149 3164 2951 2277 106 0 0 chr18 15779662 15779954 -70897594 - AluSq SINE Alu -21 292 1 1238 205 5 0 chr18 15780019 15780224 -70897324 + Tigger7 DNA MER2_type 1 206 -2281 507 187 0 0 chr18 15780227 15780302 -70897246 - AluS SINE Alu -236 77 3 1929 242 103 26 chr18 15780303 15781063 -70896485 - L1MEc LINE L1 -3166 3049 2232 1589 172 0 46 chr18 15781079 15781257 -70896291 - MER33 DNA MER1_type -2273 312 156 2231 98 14 7 chr18 15781257 15781553 -70895995 - AluSx SINE Alu -14 298 1 1589 172 0 46 chr18 15781553 15781719 -70895829 - MER33 DNA MER1_type -2429 156 1 236 260 78 42 chr18 15781719 15781911 -70895637 - L1MEc LINE L1 -4138 2258 2060 2239 122 0 3 chr18 15782094 15782406 -70895142 - AluSx SINE Alu -1 311 1 547 175 10 10 chr18 15782586 15782683 -70894865 - AluJb SINE Alu -35 277 181 226 234 138 21 chr18 15782686 15782780 -70894768 - L1MEc LINE L1 -4752 1644 1540 1932 151 3 25 chr18 15783466 15783785 -70893763 - AluSx SINE Alu 0 312 1 991 118 0 22 chr18 15783790 15783926 -70893622 - FLAM_C SINE Alu 0 133 1 434 292 9 0 chr18 15784149 15784262 -70893286 + 7SK RNA RNA 6 119 -74 2370 64 0 0 chr18 15785269 15785570 -70891978 - AluY SINE Alu 0 301 1 1547 147 117 26 chr18 15785636 15785909 -70891639 + AluJo SINE Alu 5 302 -10 231 61 0 0 chr18 15786896 15786929 -70890619 + (TC)n Simple_repeat Simple_repeat 2 34 0 1770 124 94 0 chr18 15786947 15787235 -70890313 + AluSx SINE Alu 7 319 0 329 315 92 38 chr18 15787262 15787446 -70890102 + MIR SINE MIR 54 247 -15 1873 160 7 16 chr18 15787886 15788193 -70889355 - AluJb SINE Alu -2 310 7 2240 99 3 0 chr18 15788687 15789030 -70888518 - AluSc SINE Alu 0 348 5 222 189 54 14 chr18 15789439 15789513 -70888035 + L2 LINE L2 1712 1788 -1526 525 159 0 34 chr18 15789673 15789761 -70887787 - AluJo SINE Alu -7 305 221 1115 171 11 0 chr18 15789761 15789936 -70887612 - AluJo SINE Alu -124 188 12 506 342 144 13 chr18 15789955 15790426 -70887122 + L2 LINE L2 1805 2337 -977 441 273 0 60 chr18 15790431 15790581 -70886967 + L2 LINE L2 3169 3309 -4 22 0 0 0 chr18 15790631 15790653 -70886895 + AT_rich Low_complexity Low_complexity 1 22 0 2238 81 10 17 chr18 15790706 15791004 -70886544 + AluY SINE Alu 1 296 -15 6229 121 23 237 chr18 15791014 15791774 -70885774 + L1MA3 LINE L1 13 598 -6967 1818 180 122 22 chr18 15791774 15792191 -70885357 + LTR2B LTR ERV1 32 490 0 6229 121 23 237 chr18 15792191 15792989 -70884559 + L1MA3 LINE L1 598 1565 -6000 7609 143 25 116 chr18 15793017 15793306 -70884242 + L1MA3 LINE L1 4447 4761 -2804 2384 96 3 0 chr18 15793306 15793607 -70883941 + AluSg1 SINE Alu 1 302 -7 7609 143 25 116 chr18 15793607 15794078 -70883470 + L1MA3 LINE L1 4761 5273 -2292 3356 133 18 2 chr18 15794078 15794567 -70882981 + LOR1a LTR ERV1 1 497 0 7609 143 25 116 chr18 15794567 15795705 -70881843 + L1MA3 LINE L1 5273 6174 -1391 4673 81 78 38 chr18 15795715 15796988 -70880560 - pTR5 LTR ERV1 0 2468 1524 189 74 0 0 chr18 15796993 15797020 -70880528 + (TA)n Simple_repeat Simple_repeat 1 27 0 1815 139 0 20 chr18 15797054 15797357 -70880191 + L1MA3 LINE L1 6158 6454 -1111 6223 144 163 81 chr18 15797363 15798930 -70878618 - pTR5 LTR ERV1 0 2438 744 4729 118 22 0 chr18 15798930 15799854 -70877694 + L1MA3 LINE L1 6453 7398 -326 2000 139 0 7 chr18 15799856 15800185 -70877363 + AluSx SINE Alu 1 327 0 1310 123 33 16 chr18 15800185 15800418 -70877130 + L1MA3 LINE L1 7481 7724 0 2456 67 13 0 chr18 15800557 15800855 -70876693 - AluSp SINE Alu -11 302 1 1182 229 15 34 chr18 15800922 15801250 -70876298 - MER46C DNA MER2_type -4 334 13 328 275 0 0 chr18 15801491 15801571 -70875977 - Charlie4a DNA MER1_type 0 508 429 1046 173 0 16 chr18 15801572 15801757 -70875791 - AluJ SINE Alu -9 303 122 1127 101 24 6 chr18 15801784 15801953 -70875595 - L1PA10 LINE L1 0 6168 5997 889 177 0 14 chr18 15801953 15802100 -70875448 - AluJ SINE Alu -167 145 1 1102 212 120 11 chr18 15802105 15802463 -70875085 - Charlie4a DNA MER1_type -74 434 38 716 186 43 7 chr18 15802612 15802752 -70874796 - FAM SINE Alu -16 169 25 1488 226 20 11 chr18 15803768 15804118 -70873430 + L1MC2 LINE L1 28 380 -6046 3411 177 149 37 chr18 15804128 15804657 -70872891 + L1MC2 LINE L1 1152 1620 -4806 2239 124 3 0 chr18 15804657 15804964 -70872584 - AluSx SINE Alu -4 308 1 3411 177 149 37 chr18 15804964 15805044 -70872504 + L1MC2 LINE L1 1620 1690 -4736 1983 95 4 0 chr18 15805044 15805306 -70872242 + AluSg SINE Alu 1 263 -47 195 69 0 0 chr18 15805308 15805337 -70872211 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 2237 111 0 7 chr18 15805344 15805650 -70871898 + AluSx SINE Alu 1 304 -8 3411 177 149 37 chr18 15805650 15806319 -70871229 + L1MC2 LINE L1 1695 4105 -2321 1681 229 35 0 chr18 15806314 15806799 -70870749 + L1MC2 LINE L1 4467 4968 -1458 * 3759 182 33 12 chr18 15806801 15807554 -70869994 - ERVL LTR ERVL -3707 2057 1289 2342 80 7 10 chr18 15808349 15808648 -70868900 + AluY SINE Alu 1 298 -13 282 284 27 0 chr18 15809863 15809937 -70867611 - MIR SINE MIR -71 191 116 286 390 75 5 chr18 15810023 15810236 -70867312 - L3 LINE CR1 -444 1133 906 1840 100 0 0 chr18 15810371 15810610 -70866938 - AluY SINE Alu -18 293 55 250 354 130 22 chr18 15810928 15810949 -70866599 - L3 LINE CR1 -759 818 801 2208 126 0 0 chr18 15810949 15811243 -70866305 - AluSx SINE Alu -18 294 1 250 354 130 22 chr18 15811243 15811444 -70866104 - L3 LINE CR1 -776 801 572 447 353 82 40 chr18 15811632 15812037 -70865511 - L2 LINE L2 0 3272 2851 594 214 16 8 chr18 15812181 15812307 -70865241 - FLAM_A SINE Alu -6 127 1 1123 164 15 25 chr18 15812307 15812508 -70865040 + AluJo SINE Alu 110 308 -4 2778 166 90 8 chr18 15812524 15813506 -70864042 + L1MC2 LINE L1 5045 6111 -513 874 140 76 137 chr18 15813504 15813605 -70863943 + L1MC2 LINE L1 6330 6436 -188 * 2512 66 0 0 chr18 15813605 15813907 -70863641 - AluY SINE Alu -9 302 1 874 140 76 137 chr18 15813907 15814119 -70863429 + L1MC2 LINE L1 6436 6624 0 1165 294 192 28 chr18 15814145 15815083 -70862465 - L2 LINE L2 -630 2684 1593 31 0 0 0 chr18 15815162 15815193 -70862355 + AT_rich Low_complexity Low_complexity 1 31 0 1265 156 194 4 chr18 15815231 15815490 -70862058 - AluJo SINE Alu 0 304 1 1074 186 60 35 chr18 15815601 15815791 -70861757 + L1M4 LINE L1 4451 4652 -1494 2310 84 7 0 chr18 15815791 15816087 -70861461 + AluSx SINE Alu 1 298 -14 1074 186 60 35 chr18 15816087 15816181 -70861367 + L1M4 LINE L1 4652 4742 -1404 535 168 158 0 chr18 15816187 15816288 -70861260 + FLAM_C SINE Alu 3 119 -14 1276 137 5 5 chr18 15816304 15816501 -70861047 + AluSx SINE Alu 1 197 -115 24 77 0 0 chr18 15816692 15816744 -70860804 + AT_rich Low_complexity Low_complexity 1 52 0 203 220 34 0 chr18 15816783 15816842 -70860706 + GA-rich Low_complexity Low_complexity 1 61 0 2208 89 7 7 chr18 15817406 15817699 -70859849 - AluSc SINE Alu -16 293 1 189 0 0 0 chr18 15817722 15817743 -70859805 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2020 119 0 60 chr18 15818196 15818515 -70859033 - AluJb SINE Alu -10 302 3 21 0 0 0 chr18 15818823 15818844 -70858704 + AT_rich Low_complexity Low_complexity 1 21 0 813 136 0 0 chr18 15820033 15820151 -70857397 + AluJb SINE Alu 1 118 -194 207 0 0 0 chr18 15820158 15820181 -70857367 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 21 36 0 0 chr18 15820194 15820222 -70857326 + AT_rich Low_complexity Low_complexity 1 28 0 2458 75 0 0 chr18 15820353 15820661 -70856887 - AluY SINE Alu -3 308 1 1105 186 93 22 chr18 15821785 15822011 -70855537 + MIR SINE MIR 5 246 -16 1117 174 73 43 chr18 15822013 15822111 -70855437 + MER44D DNA MER2_type 3 97 -2394 2120 134 0 0 chr18 15822111 15822409 -70855139 - AluSx SINE Alu -14 298 1 1117 174 73 43 chr18 15822409 15822637 -70854911 + MER44D DNA MER2_type 97 609 0 2081 93 53 30 chr18 15822646 15822948 -70854600 - AluSg SINE Alu -1 309 1 375 130 43 43 chr18 15823004 15823096 -70854452 + L1MB7 LINE L1 6084 6175 -9 2327 70 0 13 chr18 15824160 15824458 -70853090 + AluY SINE Alu 1 294 -17 308 291 101 28 chr18 15824874 15825053 -70852495 + L1ME4a LINE L1 5717 5908 -213 511 268 22 7 chr18 15825581 15825719 -70851829 - MIR SINE MIR -118 144 5 310 301 48 0 chr18 15825864 15825947 -70851601 + MIR3 SINE MIR 81 167 -41 462 301 123 8 chr18 15826002 15826238 -70851310 + L2 LINE L2 2115 2377 -937 708 174 0 0 chr18 15826242 15826351 -70851197 - FLAM_A SINE Alu -33 109 1 682 256 117 40 chr18 15826354 15826627 -70850921 + L2 LINE L2 2455 2748 -566 273 261 101 50 chr18 15826626 15826698 -70850850 - L2 LINE L2 -2 3270 3188 * 2214 98 75 26 chr18 15826698 15827045 -70850503 + THE1B LTR MaLR 1 364 0 273 261 101 50 chr18 15827045 15827091 -70850457 - L2 LINE L2 -84 3188 3146 369 62 0 0 chr18 15827107 15827155 -70850393 + (CA)n Simple_repeat Simple_repeat 2 49 0 1319 176 13 54 chr18 15827187 15827500 -70850048 + AluSx SINE Alu 1 300 -12 569 225 123 59 chr18 15828287 15828523 -70849025 + MIR SINE MIR 11 261 -1 220 322 100 0 chr18 15828590 15828680 -70848868 - L2 LINE L2 -42 3230 3132 506 240 41 87 chr18 15828867 15829076 -70848472 - MIR SINE MIR -15 247 47 239 370 66 33 chr18 15829135 15829316 -70848232 + MIR3 SINE MIR 1 187 -21 317 335 155 6 chr18 15829425 15829586 -70847962 + MER5A DNA MER1_type 5 189 0 1920 134 86 36 chr18 15829727 15830144 -70847404 - L1MB8 LINE L1 -10 6168 5731 22 0 0 0 chr18 15830151 15830173 -70847375 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 15830505 15830527 -70847021 + AT_rich Low_complexity Low_complexity 1 22 0 1878 130 7 11 chr18 15830756 15831033 -70846515 - AluSx SINE Alu -36 276 1 1116 278 49 19 chr18 15831622 15832267 -70845281 - L2 LINE L2 -87 3226 2496 1264 92 12 0 chr18 15832268 15832432 -70845116 - AluSg/x SINE Alu -50 262 97 390 225 141 79 chr18 15832536 15832763 -70844785 - L2 LINE L2 -936 2378 2138 431 250 100 62 chr18 15832977 15833137 -70844411 - MIR3 SINE MIR -35 173 8 772 182 0 0 chr18 15833395 15833527 -70844021 - FLAM_A SINE Alu -1 132 1 286 343 89 91 chr18 15834058 15834199 -70843349 - L2 LINE L2 -7 3265 3125 2313 80 13 13 chr18 15834199 15834510 -70843038 + AluSp SINE Alu 1 311 -2 286 343 89 91 chr18 15834510 15834806 -70842742 - L2 LINE L2 -147 3125 2829 325 182 109 153 chr18 15834863 15835203 -70842345 + L1ME4a LINE L1 5758 6082 -39 414 75 30 30 chr18 15835227 15835294 -70842254 + Tigger2 DNA MER2_type 3 69 -2649 * 1670 126 141 40 chr18 15835284 15835529 -70842019 + Tigger2 DNA MER2_type 2273 2492 -226 1628 144 0 92 chr18 15835529 15835835 -70841713 + AluJo SINE Alu 3 280 -32 204 40 0 0 chr18 15835835 15835860 -70841688 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1670 126 141 40 chr18 15835860 15836018 -70841530 + Tigger2 DNA MER2_type 2491 2718 0 409 321 88 0 chr18 15836152 15836289 -70841259 - L2 LINE L2 -3 3269 3121 31 26 0 0 chr18 15837248 15837286 -70840262 + AT_rich Low_complexity Low_complexity 1 38 0 441 0 0 0 chr18 15837797 15837846 -70839702 + (CA)n Simple_repeat Simple_repeat 2 50 0 325 227 55 18 chr18 15839382 15839492 -70838056 + MLT1L LTR MaLR 410 523 -92 1317 202 187 45 chr18 15839537 15839899 -70837649 - L1MC4 LINE L1 0 8042 7733 1546 172 20 53 chr18 15839899 15840201 -70837347 - AluJo SINE Alu -16 296 5 1317 202 187 45 chr18 15840201 15840431 -70837117 - L1MC4 LINE L1 -309 7733 7366 1962 216 49 47 chr18 15840431 15841023 -70836525 + MLT1E LTR MaLR 1 593 0 1255 201 67 56 chr18 15841028 15841366 -70836182 - L1MC4 LINE L1 -681 7361 7015 1635 180 10 7 chr18 15841366 15841661 -70835887 - AluJo SINE Alu -16 296 1 1255 201 67 56 chr18 15841661 15841754 -70835794 - L1MC4 LINE L1 -1027 7015 6925 1837 127 24 31 chr18 15841778 15842070 -70835478 + AluSx SINE Alu 1 290 -22 807 216 60 19 chr18 15842250 15842518 -70835030 - L1MB7 LINE L1 -131 6053 5775 * 991 222 22 22 chr18 15842514 15842789 -70834759 - L1MC4 LINE L1 -1115 6927 6653 1634 151 47 26 chr18 15843626 15843970 -70833578 - MER47A DNA MER2_type 0 366 16 3350 201 48 47 chr18 15843993 15844244 -70833304 + MER21B LTR ERV1 1 250 -613 2313 104 0 0 chr18 15844244 15844542 -70833006 - AluSg SINE Alu -12 298 1 3350 201 48 47 chr18 15844542 15845104 -70832444 + MER21B LTR ERV1 250 815 -48 233 301 54 21 chr18 15845280 15845373 -70832175 - L2 LINE L2 -2 3311 3216 268 265 0 29 chr18 15845394 15845462 -70832086 + L2 LINE L2 2685 2750 -564 1962 171 77 0 chr18 15845463 15845891 -70831657 + L1MB2 LINE L1 5686 6146 -25 2064 100 43 10 chr18 15845906 15846205 -70831343 + AluSc SINE Alu 1 309 0 927 241 94 82 chr18 15846471 15846994 -70830554 + L2 LINE L2 2736 3287 -26 327 271 10 10 chr18 15847003 15847099 -70830449 + GA-rich Low_complexity Low_complexity 2 97 0 2212 121 0 0 chr18 15847202 15847499 -70830049 - AluSx SINE Alu -15 297 1 2217 113 0 3 chr18 15848786 15849095 -70828453 - AluSx SINE Alu 0 312 5 261 189 94 0 chr18 16049118 16049171 -70628377 - L1MA3 LINE L1 -69 6236 6179 4231 209 58 84 chr18 16049175 16050121 -70627427 - L1M4 LINE L1 -874 5336 4444 2315 93 7 0 chr18 16050121 16050421 -70627127 - AluSc SINE Alu -3 306 5 4231 209 58 84 chr18 16050421 16051041 -70626507 - L1M4 LINE L1 -1766 4444 3810 12848 113 24 22 chr18 16051041 16051666 -70625882 + Tigger1 DNA MER2_type 1 623 -1795 2126 125 0 10 chr18 16051666 16051970 -70625578 + AluSx SINE Alu 1 301 -11 12848 113 24 22 chr18 16051970 16052331 -70625217 + Tigger1 DNA MER2_type 623 982 -1436 2424 53 0 20 chr18 16052331 16052632 -70624916 + AluY SINE Alu 7 301 -10 12848 113 24 22 chr18 16052632 16053610 -70623938 + Tigger1 DNA MER2_type 982 1970 -448 439 237 101 0 chr18 16053610 16053749 -70623799 - L1MEc LINE L1 -4174 2043 1891 821 160 0 0 chr18 16053751 16053876 -70623672 + FLAM_C SINE Alu 1 125 -8 5895 85 35 28 chr18 16053888 16054073 -70623475 - L1PB2 LINE L1 -2 6149 5967 1803 140 19 42 chr18 16054073 16054380 -70623168 - AluSx SINE Alu -12 300 1 5895 85 35 28 chr18 16054380 16055176 -70622372 - L1PB2 LINE L1 -184 5967 5161 544 202 109 0 chr18 16055263 16055382 -70622166 - FLAM_C SINE Alu -1 132 1 2111 132 0 20 chr18 16055502 16055806 -70621742 - AluSx SINE Alu -14 298 1 380 290 20 0 chr18 16055807 16055907 -70621641 - L1MEc LINE L1 -5130 1006 905 262 346 38 15 chr18 16056027 16056160 -70621388 - L1M4 LINE L1 -5218 913 778 473 253 176 28 chr18 16056412 16056646 -70620902 - L1M4 LINE L1 -5621 510 4 764 203 30 24 chr18 16056916 16057180 -70620368 + MLT1D LTR MaLR 114 427 -78 780 154 0 37 chr18 16057210 16057346 -70620202 + FLAM_C SINE Alu 2 132 -11 316 127 45 31 chr18 16057368 16057443 -70620105 + MLT1D LTR MaLR 437 503 -2 671 240 91 5 chr18 16059290 16059498 -70618050 + MIR SINE MIR 37 262 0 1508 96 30 0 chr18 16059530 16059727 -70617821 + AluSx SINE Alu 1 203 -109 903 257 95 3 chr18 16060760 16061064 -70616484 - L1MEc LINE L1 -6030 366 35 1018 242 42 24 chr18 16061251 16061676 -70615872 + L1M4 LINE L1 2903 3335 -2811 723 176 37 59 chr18 16061672 16061859 -70615689 + L1MB4 LINE L1 5998 6180 0 * 2270 80 6 48 chr18 16062026 16062338 -70615210 - AluY SINE Alu -12 299 1 612 120 0 0 chr18 16062392 16062484 -70615064 - AluSg/x SINE Alu 0 309 218 555 156 0 0 chr18 16063093 16063183 -70614365 + AluSg/x SINE Alu 219 308 -4 2145 88 25 50 chr18 16063205 16063522 -70614026 + AluSx SINE Alu 1 309 -3 361 120 0 0 chr18 16063971 16064021 -70613527 - AluSp/q SINE Alu -38 265 216 2248 94 14 0 chr18 16064021 16064309 -70613239 - AluSp SINE Alu -21 292 1 265 233 0 0 chr18 16064313 16064373 -70613175 - FLAM_A SINE Alu -2 131 72 2349 88 20 0 chr18 16064616 16064921 -70612627 + AluSp SINE Alu 1 311 -2 2086 135 0 3 chr18 16064945 16065248 -70612300 + AluSx SINE Alu 1 302 -10 1630 154 75 34 chr18 16065549 16065841 -70611707 - AluJo SINE Alu -2 310 7 561 182 23 53 chr18 16066010 16066142 -70611406 - FLAM_C SINE Alu -5 128 1 29 0 0 0 chr18 16066486 16066515 -70611033 + AT_rich Low_complexity Low_complexity 1 29 0 1019 144 48 0 chr18 16066537 16066704 -70610844 - FRAM SINE Alu -3 173 1 2115 129 3 0 chr18 16066728 16067015 -70610533 - AluSg SINE Alu -22 288 1 2257 101 0 3 chr18 16067016 16067313 -70610235 - AluSx SINE Alu -16 296 1 2317 100 0 3 chr18 16068495 16068796 -70608752 + AluSx SINE Alu 1 300 -12 239 266 137 24 chr18 16068904 16069028 -70608520 + MER5B DNA MER1_type 18 155 -23 1758 174 0 28 chr18 16069052 16069369 -70608179 + AluJo SINE Alu 1 308 -4 26 0 0 0 chr18 16069766 16069792 -70607756 + AT_rich Low_complexity Low_complexity 1 26 0 2465 87 0 0 chr18 16070012 16070323 -70607225 + AluY SINE Alu 1 311 0 2464 84 0 10 chr18 16070557 16070866 -70606682 - AluSx SINE Alu -6 306 1 189 0 0 0 chr18 16071177 16071198 -70606350 + (T)n Simple_repeat Simple_repeat 1 21 0 225 0 0 0 chr18 16071323 16071348 -70606200 + (A)n Simple_repeat Simple_repeat 1 25 0 13004 60 11 0 chr18 16071348 16072921 -70604627 - HERVL LTR ERVL -2748 2906 1317 1078 158 12 0 chr18 16072944 16073115 -70604433 + AluSg/x SINE Alu 137 309 -1 541 153 0 0 chr18 16073115 16073213 -70604335 + L1MCa LINE L1 1830 1927 -4499 1649 193 0 14 chr18 16073724 16074014 -70603534 + AluJb SINE Alu 1 286 -26 780 62 0 0 chr18 16074060 16074156 -70603392 + HY3 scRNA scRNA 1 96 -5 2726 42 0 0 chr18 16074190 16074499 -70603049 + AluY SINE Alu 1 309 -2 1037 152 49 0 chr18 16074634 16074798 -70602750 - FRAM SINE Alu -4 172 1 326 161 0 74 chr18 16074802 16074883 -70602665 - MLT1B LTR MaLR -217 173 99 3045 60 58 28 chr18 16074884 16075315 -70602233 - MLT2A1 LTR ERVL 0 444 1 16983 102 21 12 chr18 16075315 16076868 -70600680 - ERVL LTR ERVL 0 5654 4117 1874 124 8 4 chr18 16076868 16077127 -70600421 - AluSx SINE Alu -28 284 25 16983 102 21 12 chr18 16077127 16077165 -70600383 - ERVL LTR ERVL -1537 4117 4081 2560 41 0 3 chr18 16077165 16077460 -70600088 + AluY SINE Alu 1 294 -17 16983 102 21 12 chr18 16077460 16078592 -70598956 - ERVL LTR ERVL -1573 4081 2933 2577 66 0 0 chr18 16078593 16078898 -70598650 + AluY SINE Alu 1 305 -6 2071 141 3 0 chr18 16079028 16079327 -70598221 + AluSx SINE Alu 1 300 -12 818 156 0 8 chr18 16079503 16079631 -70597917 + FLAM_C SINE Alu 1 127 -16 2127 116 30 0 chr18 16080412 16080715 -70596833 + AluSq SINE Alu 1 312 -1 533 311 144 30 chr18 16080840 16081313 -70596235 + L1MC4 LINE L1 7453 7979 -63 1445 197 28 3 chr18 16081466 16081750 -70595798 + AluJb SINE Alu 1 291 -21 728 274 36 8 chr18 16081898 16082172 -70595376 + L1ME3A LINE L1 5637 5919 -251 813 218 41 6 chr18 16082178 16082348 -70595200 + L1ME3A LINE L1 5994 6169 -1 2207 118 0 10 chr18 16082352 16082658 -70594890 + AluSq SINE Alu 1 303 -10 272 283 47 9 chr18 16082743 16082849 -70594699 - L2 LINE L2 -10 3303 3194 2356 99 0 0 chr18 16082849 16083141 -70594407 + AluSq SINE Alu 1 292 -21 1854 105 4 35 chr18 16083144 16083402 -70594146 + AluSx SINE Alu 1 250 -62 1666 142 7 22 chr18 16083405 16083679 -70593869 + AluJb SINE Alu 41 310 -2 301 264 150 18 chr18 16083679 16083846 -70593702 - L2 LINE L2 -253 3060 2872 398 173 240 10 chr18 16083915 16084019 -70593529 + MER3 DNA MER1_type 77 204 -5 293 114 91 0 chr18 16083980 16084024 -70593524 - MER3 DNA MER1_type -119 90 43 * 1804 125 59 3 chr18 16084112 16084399 -70593149 + AluSx SINE Alu 1 303 -9 491 191 108 70 chr18 16084694 16084851 -70592697 + LTR45 LTR ERV1 352 514 -11 301 218 269 10 chr18 16084863 16085056 -70592492 - L2 LINE L2 -544 2770 2528 21 0 0 0 chr18 16085691 16085712 -70591836 + AT_rich Low_complexity Low_complexity 1 21 0 2281 87 3 23 chr18 16086103 16086413 -70591135 + AluY SINE Alu 1 304 -7 1181 130 0 0 chr18 16086877 16087038 -70590510 - AluSg/x SINE Alu -18 292 132 1996 157 3 3 chr18 16087038 16087343 -70590205 - AluSx SINE Alu -7 305 1 538 228 66 35 chr18 16087443 16087671 -70589877 + L1MC5 LINE L1 7302 7536 -425 1436 104 145 8 chr18 16087680 16087919 -70589629 + HSMAR2 DNA Mariner 2 278 -1024 2352 77 3 3 chr18 16087919 16088216 -70589332 + AluY SINE Alu 1 297 -14 1946 125 3 40 chr18 16088225 16088361 -70589187 + AluSx SINE Alu 1 141 -171 2128 127 0 3 chr18 16088361 16088660 -70588888 + AluSq SINE Alu 1 298 -15 1946 125 3 40 chr18 16088660 16088819 -70588729 + AluSx SINE Alu 141 285 -27 2244 71 11 4 chr18 16088820 16089101 -70588447 + AluSg SINE Alu 4 286 -24 199 0 65 0 chr18 16089106 16089137 -70588411 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 2386 80 0 29 chr18 16089146 16089458 -70588090 + AluSq SINE Alu 1 303 -10 195 42 0 0 chr18 16089574 16089598 -70587950 + (A)n Simple_repeat Simple_repeat 1 24 0 225 238 71 24 chr18 16089599 16089633 -70587915 + MIR SINE MIR 174 205 -57 2162 115 3 7 chr18 16089633 16089929 -70587619 + AluSp SINE Alu 2 296 -17 225 238 71 24 chr18 16089929 16089978 -70587570 + MIR SINE MIR 205 261 -1 1471 185 52 31 chr18 16090009 16090296 -70587252 - AluJb SINE Alu -19 293 1 2402 79 0 10 chr18 16091038 16091343 -70586205 + AluY SINE Alu 1 302 -9 2210 92 0 57 chr18 16091792 16092107 -70585441 - AluSx SINE Alu -15 297 1 1156 219 81 35 chr18 16092233 16092603 -70584945 - L2 LINE L2 -8 3305 2919 252 0 0 0 chr18 16092689 16092717 -70584831 + (CA)n Simple_repeat Simple_repeat 2 29 0 282 56 0 0 chr18 16092717 16092753 -70584795 + (TC)n Simple_repeat Simple_repeat 1 36 0 193 261 15 85 chr18 16092777 16092907 -70584641 + L2 LINE L2 2253 2373 -941 2329 109 0 6 chr18 16092931 16093244 -70584304 + AluSx SINE Alu 2 312 0 2890 156 34 22 chr18 16093246 16093356 -70584192 + L1MB2 LINE L1 5322 5429 -742 1827 123 28 0 chr18 16093356 16093632 -70583916 + AluSg SINE Alu 21 303 0 2090 115 24 7 chr18 16093632 16093928 -70583620 + AluSx SINE Alu 1 301 -11 2890 156 34 22 chr18 16093928 16094353 -70583195 + L1MB2 LINE L1 5428 5865 -306 1742 153 32 59 chr18 16094353 16094725 -70582823 - MLT1A1 LTR MaLR 0 365 4 351 44 0 0 chr18 16096400 16096445 -70581103 + (CA)n Simple_repeat Simple_repeat 2 46 0 366 130 0 0 chr18 16097232 16097286 -70580262 - AluSq SINE Alu -5 297 244 1426 101 5 0 chr18 16097288 16097476 -70580072 - AluSq SINE Alu -124 189 1 2416 77 3 0 chr18 16097598 16097898 -70579650 + AluSx SINE Alu 1 301 -11 431 162 61 88 chr18 16098405 16098553 -70578995 - L1MB7 LINE L1 -26 6158 6015 2407 91 0 0 chr18 16098566 16098864 -70578684 - AluSx SINE Alu -14 298 1 1846 183 19 3 chr18 16098898 16099258 -70578290 - L1MB7 LINE L1 -182 6002 5637 230 114 0 23 chr18 16099294 16099338 -70578210 + (CA)n Simple_repeat Simple_repeat 2 44 0 972 182 16 11 chr18 16099359 16099546 -70578002 - MLT2B1 LTR ERVL -40 480 293 939 145 63 0 chr18 16099558 16099717 -70577831 - FRAM SINE Alu 0 176 8 817 223 35 10 chr18 16099717 16099914 -70577634 - MLT2B1 LTR ERVL -318 202 1 1742 165 19 33 chr18 16099922 16100235 -70577313 - L1MB7 LINE L1 -542 5642 5332 2421 54 10 7 chr18 16100235 16100533 -70577015 - AluY SINE Alu -12 299 1 1742 165 19 33 chr18 16100533 16100704 -70576844 - L1MB7 LINE L1 -852 5332 5160 180 0 0 0 chr18 16100724 16100744 -70576804 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2075 103 7 0 chr18 16100751 16101024 -70576524 - AluSx SINE Alu -37 275 1 1956 116 7 14 chr18 16101571 16101889 -70575659 - AluSq SINE Alu 0 316 1 1279 172 9 43 chr18 16102084 16102316 -70575232 + AluJo SINE Alu 6 229 -83 269 266 104 45 chr18 16102354 16102576 -70574972 - L1ME4a LINE L1 -23 6098 5864 2363 82 0 7 chr18 16103168 16103462 -70574086 - AluSq SINE Alu -21 292 1 22 99 0 0 chr18 16103551 16103622 -70573926 + AT_rich Low_complexity Low_complexity 1 71 0 203 259 19 0 chr18 16103997 16104051 -70573497 + L2 LINE L2 3218 3272 0 1314 170 0 14 chr18 16104420 16104632 -70572916 + AluJb SINE Alu 1 209 -103 276 270 174 0 chr18 16104637 16104752 -70572796 + L2 LINE L2 2526 2660 -654 2184 91 3 7 chr18 16105067 16105391 -70572157 + AluY SINE Alu 1 323 0 2284 86 7 0 chr18 16105646 16105936 -70571612 + AluSq SINE Alu 1 292 -21 1664 148 41 0 chr18 16106023 16106331 -70571217 + AluJo SINE Alu 1 319 0 357 189 270 18 chr18 16106763 16106874 -70570674 - L2 LINE L2 -6 3307 3169 950 140 33 56 chr18 16106890 16106943 -70570605 + L1MA8 LINE L1 6079 6132 -159 2268 103 0 19 chr18 16106943 16107262 -70570286 + AluSq SINE Alu 1 313 0 950 140 33 56 chr18 16107262 16107422 -70570126 + L1MA8 LINE L1 6132 6287 -4 2160 119 0 22 chr18 16108109 16108428 -70569120 - AluSx SINE Alu 0 312 1 195 100 0 0 chr18 16109881 16109911 -70567637 + (TATAG)n Simple_repeat Simple_repeat 2 31 0 373 240 138 63 chr18 16109911 16110165 -70567383 - MLT1K LTR MaLR -5 583 311 326 215 160 109 chr18 16110491 16110747 -70566801 + MLT1L LTR MaLR 243 615 0 2552 63 7 0 chr18 16110798 16111097 -70566451 - AluY SINE Alu -10 301 1 332 298 65 0 chr18 16111419 16111543 -70566005 + L1MC5 LINE L1 7311 7442 -519 575 274 77 11 chr18 16111551 16111764 -70565784 - MLT1B LTR MaLR -3 379 155 228 67 0 0 chr18 16111765 16111795 -70565753 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 1653 192 7 0 chr18 16111815 16112102 -70565446 + AluJb SINE Alu 1 289 -23 214 273 192 10 chr18 16112448 16112547 -70565001 + L2 LINE L2 3197 3313 0 26 0 0 0 chr18 16112923 16112949 -70564599 + AT_rich Low_complexity Low_complexity 1 26 0 1928 100 63 0 chr18 16113177 16113446 -70564102 + AluSq SINE Alu 25 310 -3 280 291 122 33 chr18 16113527 16113708 -70563840 - L2 LINE L2 -1128 2186 1972 2109 108 8 101 chr18 16113708 16114086 -70563462 + MER61A LTR ERV1 1 343 0 280 291 122 33 chr18 16114086 16114175 -70563373 - L2 LINE L2 -1342 1972 1892 1641 184 33 10 chr18 16114260 16114564 -70562984 + AluJo SINE Alu 1 311 -1 32 56 0 14 chr18 16114767 16114793 -70562755 + AT_rich Low_complexity Low_complexity 1 26 -44 2437 92 0 3 chr18 16114793 16115097 -70562451 + AluSx SINE Alu 1 303 -9 32 56 0 14 chr18 16115097 16115141 -70562407 + AT_rich Low_complexity Low_complexity 26 70 0 1534 179 48 11 chr18 16115257 16115530 -70562018 - AluJb SINE Alu -29 283 1 1421 109 0 5 chr18 16115813 16116006 -70561542 + AluSg/x SINE Alu 121 312 0 1737 152 3 76 chr18 16116139 16116469 -70561079 - AluJb SINE Alu -6 306 1 2203 114 23 7 chr18 16116596 16116902 -70560646 - AluSx SINE Alu -1 311 1 1839 134 19 39 chr18 16117044 16117351 -70560197 + AluSx SINE Alu 1 301 -11 325 300 24 35 chr18 16117401 16117480 -70560068 + L1ME4a LINE L1 5748 5826 -295 2019 96 0 11 chr18 16117480 16117751 -70559797 + AluSq SINE Alu 32 299 -14 325 300 24 35 chr18 16117751 16117841 -70559707 + L1ME4a LINE L1 5826 5915 -206 215 21 0 83 chr18 16117967 16118015 -70559533 + (TA)n Simple_repeat Simple_repeat 2 45 0 807 98 0 0 chr18 16118015 16118117 -70559431 - AluSg/x SINE Alu -22 290 189 1046 98 0 0 chr18 16118117 16118249 -70559299 - AluY SINE Alu -179 132 1 808 186 7 7 chr18 16118249 16118394 -70559154 - AluJb SINE Alu -166 146 2 373 100 0 0 chr18 16118405 16118455 -70559093 - Alu SINE Alu -4 296 247 2319 95 0 7 chr18 16118459 16118763 -70558785 - AluSp SINE Alu -11 302 1 24 53 0 0 chr18 16118939 16118977 -70558571 + AT_rich Low_complexity Low_complexity 1 38 0 2208 99 20 0 chr18 16118986 16119280 -70558268 - AluSp SINE Alu -13 300 1 951 229 114 40 chr18 16119555 16119618 -70557930 + MER2 DNA MER2_type 26 83 -262 2141 102 14 3 chr18 16119618 16119911 -70557637 - AluSx SINE Alu -16 296 1 951 229 114 40 chr18 16119911 16120144 -70557404 + MER2 DNA MER2_type 83 344 -1 208 270 322 23 chr18 16120529 16120703 -70556845 - MIR SINE MIR -12 250 25 2150 111 13 3 chr18 16121435 16121733 -70555815 - AluSx SINE Alu -11 301 1 2195 79 55 7 chr18 16121942 16122233 -70555315 + AluY SINE Alu 1 305 -6 779 177 109 6 chr18 16122637 16122812 -70554736 - MER3 DNA MER1_type -2 207 15 2160 115 14 0 chr18 16122813 16123109 -70554439 + AluY SINE Alu 1 300 -11 2248 109 3 0 chr18 16123765 16124069 -70553479 - AluSx SINE Alu -7 305 1 2476 66 0 0 chr18 16124433 16124735 -70552813 - AluY SINE Alu -9 302 1 463 265 194 67 chr18 16125518 16125690 -70551858 + L2 LINE L2 2526 2675 -638 2022 108 44 20 chr18 16125690 16125986 -70551562 - AluSg SINE Alu -7 303 1 463 265 194 67 chr18 16125986 16126014 -70551534 + L2 LINE L2 2675 2698 -615 2264 115 0 0 chr18 16126014 16126310 -70551238 + AluSx SINE Alu 1 296 -16 463 265 194 67 chr18 16126310 16126770 -70550778 + L2 LINE L2 2698 3276 -37 1718 155 0 11 chr18 16126811 16127082 -70550466 - AluJo SINE Alu -22 290 23 746 218 24 29 chr18 16127261 16127431 -70550117 + FRAM SINE Alu 4 172 -4 2142 83 0 0 chr18 16127517 16127781 -70549767 + AluSc SINE Alu 35 298 -11 1423 200 4 12 chr18 16127831 16128086 -70549462 - AluJo SINE Alu -30 282 30 2301 67 3 17 chr18 16128686 16128986 -70548562 - AluY SINE Alu -6 305 10 760 167 0 51 chr18 16129556 16129694 -70547854 - FLAM_C SINE Alu -1 132 2 297 0 0 0 chr18 16129833 16129866 -70547682 + (CA)n Simple_repeat Simple_repeat 1 33 0 2211 90 4 0 chr18 16130204 16130507 -70547041 + AluSc SINE Alu 1 304 0 235 393 0 0 chr18 16130629 16130718 -70546830 - L2 LINE L2 -21 3251 3163 37 62 0 0 chr18 16132130 16132195 -70545353 + AT_rich Low_complexity Low_complexity 1 65 0 393 94 0 0 chr18 16132195 16132283 -70545265 - Alu SINE Alu 0 306 227 1226 108 0 12 chr18 16132283 16132449 -70545099 - AluSq SINE Alu -149 164 1 692 202 23 0 chr18 16132451 16132580 -70544968 - AluJo/FLAM SINE Alu -170 132 1 211 253 33 88 chr18 16132648 16132739 -70544809 + L2 LINE L2 3186 3271 -1 335 254 114 47 chr18 16135435 16135628 -70541920 + MIR SINE MIR 56 261 -1 2361 52 17 0 chr18 16135830 16136119 -70541429 + AluSg SINE Alu 2 295 -15 198 0 0 0 chr18 16136745 16136767 -70540781 + (A)n Simple_repeat Simple_repeat 1 22 0 247 217 94 128 chr18 16137712 16137728 -70539820 - L1ME4a LINE L1 -5 6116 6101 2174 171 31 98 chr18 16137728 16138177 -70539371 + MER4A LTR ERV1 1 396 -204 1833 65 9 0 chr18 16138177 16138393 -70539155 - AluSc SINE Alu -53 256 39 2174 171 31 98 chr18 16138393 16138586 -70538962 + MER4A LTR ERV1 396 600 0 247 217 94 128 chr18 16138586 16138749 -70538799 - L1ME4a LINE L1 -20 6101 5943 2164 126 0 0 chr18 16138786 16139080 -70538468 - AluSx SINE Alu -18 294 1 822 240 6 0 chr18 16139131 16139302 -70538246 - FRAM SINE Alu -8 168 1 279 0 0 0 chr18 16139377 16139408 -70538140 + (A)n Simple_repeat Simple_repeat 1 31 0 243 61 0 0 chr18 16140803 16140836 -70536712 + (TATG)n Simple_repeat Simple_repeat 2 34 0 2137 93 0 50 chr18 16140836 16141136 -70536412 - AluSx SINE Alu -27 285 1 257 315 56 0 chr18 16141296 16141385 -70536163 + MLT1J LTR MaLR 109 202 -309 1962 136 0 41 chr18 16142265 16142582 -70534966 - AluSx SINE Alu -8 304 1 306 0 0 0 chr18 16142590 16142624 -70534924 + (T)n Simple_repeat Simple_repeat 1 34 0 2155 107 3 10 chr18 16142991 16143290 -70534258 - AluSg SINE Alu -13 297 1 1620 184 0 39 chr18 16143330 16143635 -70533913 + AluJo SINE Alu 1 293 -19 2048 126 31 0 chr18 16143857 16144151 -70533397 - AluJb SINE Alu -9 303 1 257 263 99 64 chr18 16144252 16144423 -70533125 + L1MEd LINE L1 2 178 -5941 264 295 67 0 chr18 16144543 16144648 -70532900 - L1M4 LINE L1 -879 5267 5156 1775 119 44 71 chr18 16144747 16145041 -70532507 + AluSg SINE Alu 1 286 -24 1543 168 13 42 chr18 16145141 16145451 -70532097 - AluJb SINE Alu -11 301 1 29 90 0 0 chr18 16145801 16145879 -70531669 + AT_rich Low_complexity Low_complexity 1 78 0 1531 181 22 7 chr18 16145880 16146150 -70531398 + AluJo SINE Alu 1 274 -38 1955 141 0 10 chr18 16146181 16146478 -70531070 + AluSg SINE Alu 1 294 -16 534 214 54 166 chr18 16146739 16146950 -70530598 + L2 LINE L2 1617 1753 -1561 1938 132 3 14 chr18 16146950 16147238 -70530310 - AluJo SINE Alu -24 288 4 534 214 54 166 chr18 16147238 16147471 -70530077 + L2 LINE L2 1753 2011 -1303 262 356 90 43 chr18 16148655 16148991 -70528557 + L2 LINE L2 2183 2502 -812 1956 159 0 6 chr18 16148991 16149305 -70528243 - AluJb SINE Alu 0 312 1 262 356 90 43 chr18 16149305 16149727 -70527821 + L2 LINE L2 2502 2976 -338 1493 162 72 32 chr18 16149941 16150219 -70527329 + AluJo SINE Alu 1 289 -23 886 209 19 0 chr18 16150702 16150860 -70526688 + FRAM SINE Alu 1 161 -5 405 0 0 0 chr18 16151151 16151196 -70526352 + (TG)n Simple_repeat Simple_repeat 2 46 0 1608 160 11 14 chr18 16151210 16151491 -70526057 - L1MB1 LINE L1 -44 6124 5845 959 283 128 33 chr18 16151730 16152019 -70525529 + L1M4 LINE L1 2445 2705 -3441 2430 88 0 0 chr18 16152019 16152314 -70525234 + AluSp SINE Alu 1 295 -18 959 283 128 33 chr18 16152314 16152554 -70524994 + L1M4 LINE L1 2705 2921 -3225 2021 139 0 7 chr18 16152554 16152855 -70524693 - AluSx SINE Alu -13 299 1 959 283 128 33 chr18 16152855 16153326 -70524222 + L1M4 LINE L1 2921 3541 -2605 504 242 17 0 chr18 16153348 16153468 -70524080 + L1M4 LINE L1 3716 3837 -2309 2180 113 10 6 chr18 16153478 16153789 -70523759 - AluSx SINE Alu 0 312 1 2796 192 84 74 chr18 16153796 16154031 -70523517 - L1ME1 LINE L1 -18 6148 5917 2417 97 0 0 chr18 16154031 16154341 -70523207 - AluSx SINE Alu -2 310 1 2796 192 84 74 chr18 16154341 16154914 -70522634 - L1ME1 LINE L1 -249 5917 5332 661 204 22 0 chr18 16154928 16155065 -70522483 - L1MB5 LINE L1 -9 6165 6026 1728 196 0 3 chr18 16155735 16156026 -70521522 - AluJb SINE Alu -20 292 3 1011 176 17 29 chr18 16156043 16156281 -70521267 - L1MB7 LINE L1 -5 6179 5945 2260 115 0 0 chr18 16156756 16157052 -70520496 - AluSx SINE Alu -16 296 1 2139 97 0 7 chr18 16158007 16158286 -70519262 + AluSx SINE Alu 1 277 -35 239 333 14 0 chr18 16158603 16158672 -70518876 - L2 LINE L2 -1 3271 3202 1919 116 13 36 chr18 16158680 16158982 -70518566 + AluSx SINE Alu 1 295 -17 1587 179 0 8 chr18 16159109 16159366 -70518182 - AluJb SINE Alu -57 255 1 266 255 75 78 chr18 16159912 16160206 -70517342 + L2 LINE L2 2373 2665 -649 264 284 163 7 chr18 16160378 16160519 -70517029 + L2 LINE L2 2915 3077 -195 2259 78 0 10 chr18 16160643 16160938 -70516610 - AluY SINE Alu -19 292 1 1541 233 60 87 chr18 16161908 16162521 -70515027 + L1ME3A LINE L1 5521 6117 -53 1060 304 108 20 chr18 16162607 16163295 -70514253 + L1MC4a LINE L1 5261 6008 -1800 1809 140 25 32 chr18 16165718 16166003 -70511545 - AluJb SINE Alu -29 283 1 2255 119 0 0 chr18 16166060 16166353 -70511195 + AluSx SINE Alu 1 293 -19 644 156 8 0 chr18 16166353 16166481 -70511067 + GA-rich Low_complexity Low_complexity 1 129 0 317 299 38 25 chr18 16166518 16166675 -70510873 + LTR16C LTR ERVL 330 488 -3 494 349 65 11 chr18 16167628 16167903 -70509645 + HERV16 LTR ERVL 1048 1337 -3659 338 301 0 0 chr18 16168182 16168265 -70509283 + HERV16 LTR ERVL 1719 1801 -3853 1807 316 82 58 chr18 16168394 16168836 -70508712 + HERV16 LTR ERVL 1998 2428 -3336 2370 78 0 0 chr18 16168836 16169144 -70508404 + AluSx SINE Alu 2 309 0 2197 124 0 0 chr18 16169144 16169442 -70508106 + AluSg SINE Alu 1 298 -12 1807 316 82 58 chr18 16169442 16169868 -70507680 + HERV16 LTR ERVL 2428 2903 -2861 2015 147 7 0 chr18 16169868 16170175 -70507373 + AluSx SINE Alu 1 309 -3 1807 316 82 58 chr18 16170175 16170423 -70507125 + HERV16 LTR ERVL 2903 3144 -2620 1302 208 170 43 chr18 16170687 16171086 -70506462 + MLT2B1 LTR ERVL 2 451 -69 248 0 31 0 chr18 16171086 16171118 -70506430 + (TC)n Simple_repeat Simple_repeat 2 34 0 3539 127 28 68 chr18 16171134 16171353 -70506195 + Tigger3b DNA MER2_type 6 232 -2796 1911 156 0 0 chr18 16171353 16171628 -70505920 + AluSx SINE Alu 6 280 -32 276 30 0 0 chr18 16171629 16171662 -70505886 + (TAAAA)n Simple_repeat Simple_repeat 2 34 0 3539 127 28 68 chr18 16171662 16171986 -70505562 + Tigger3b DNA MER2_type 232 520 -2508 760 177 23 0 chr18 16171986 16172116 -70505432 - FLAM_A SINE Alu 0 133 1 3539 127 28 68 chr18 16172116 16172255 -70505293 + Tigger3b DNA MER2_type 520 663 -568 275 192 0 0 chr18 16172313 16172365 -70505183 - AluJb SINE Alu -14 288 237 1520 165 35 93 chr18 16172394 16172928 -70504620 + MER41B LTR ERV1 132 469 -9 1340 197 8 0 chr18 16172932 16173166 -70504382 - AluJb SINE Alu -71 241 6 386 127 55 55 chr18 16173169 16173220 -70504328 + Tigger3b DNA MER2_type 649 699 -2330 1757 160 0 21 chr18 16173220 16173508 -70504040 + AluJo SINE Alu 1 282 -30 386 127 55 55 chr18 16173508 16173566 -70503982 + Tigger3b DNA MER2_type 698 758 -474 1566 190 3 34 chr18 16173579 16173874 -70503674 - AluJb SINE Alu -26 286 1 383 190 40 39 chr18 16173887 16173990 -70503558 - L1ME LINE L1 -344 5777 5702 2040 124 21 0 chr18 16173990 16174281 -70503267 + AluSx SINE Alu 1 297 -15 1934 83 76 0 chr18 16176522 16176809 -70500739 + AluSx SINE Alu 1 307 0 471 152 27 9 chr18 16177006 16177118 -70500430 + GA-rich Low_complexity Low_complexity 3 116 0 216 0 0 0 chr18 16177860 16177884 -70499664 + (TA)n Simple_repeat Simple_repeat 2 25 0 2436 80 3 0 chr18 16177884 16178186 -70499362 - AluSx SINE Alu -9 303 1 266 257 40 0 chr18 16178276 16178350 -70499198 - L1M4 LINE L1 -1545 4601 4525 282 227 76 50 chr18 16178426 16178545 -70499003 - MIR SINE MIR 0 262 141 211 254 0 0 chr18 16178623 16178678 -70498870 + G-rich Low_complexity Low_complexity 4 58 0 1888 143 7 7 chr18 16181911 16182211 -70495337 - AluJb SINE Alu -12 300 1 351 0 0 0 chr18 16182382 16182421 -70495127 + (CA)n Simple_repeat Simple_repeat 2 40 0 1163 198 18 4 chr18 16182572 16182799 -70494749 + AluJo SINE Alu 76 305 -7 2215 73 4 0 chr18 16182820 16183094 -70494454 + AluY SINE Alu 22 296 -15 503 214 0 0 chr18 16183197 16183286 -70494262 + Tigger3(Golem) DNA MER2_type 4 92 -2937 204 190 17 17 chr18 16183288 16183346 -70494202 + T-rich Low_complexity Low_complexity 3 60 0 4316 115 50 34 chr18 16183387 16183636 -70493912 + Tigger3(Golem) DNA MER2_type 2277 2520 -508 2016 147 0 3 chr18 16183636 16183942 -70493606 + AluSx SINE Alu 1 305 -7 4316 115 50 34 chr18 16183942 16184432 -70493116 + Tigger3(Golem) DNA MER2_type 2520 3028 0 439 277 34 0 chr18 16184487 16184635 -70492913 - MIR SINE MIR -28 234 82 1789 148 0 68 chr18 16184704 16185028 -70492520 + AluJo SINE Alu 3 304 -8 2148 117 3 32 chr18 16185350 16185666 -70491882 - AluSx SINE Alu -5 307 1 2284 119 3 0 chr18 16185883 16186194 -70491354 - AluSx SINE Alu 0 312 1 6269 77 14 28 chr18 16186807 16186895 -70490653 + L1PB1 LINE L1 4980 5068 -1083 2614 65 0 0 chr18 16186895 16187203 -70490345 + AluY SINE Alu 1 308 -3 6269 77 14 28 chr18 16187203 16187931 -70489617 + L1PB1 LINE L1 5068 5804 -347 365 86 17 0 chr18 16187931 16187989 -70489559 + (TA)n Simple_repeat Simple_repeat 1 59 0 6269 77 14 28 chr18 16187989 16188232 -70489316 + L1PB1 LINE L1 5804 6022 -129 2129 82 57 0 chr18 16188232 16188512 -70489036 + AluSx SINE Alu 1 296 -16 6269 77 14 28 chr18 16188512 16188639 -70488909 + L1PB1 LINE L1 6022 6149 -2 22 0 0 0 chr18 16188639 16188661 -70488887 + AT_rich Low_complexity Low_complexity 1 22 0 2078 123 0 7 chr18 16189420 16189752 -70487796 + AluSx SINE Alu 1 330 0 191 200 89 0 chr18 16190000 16190045 -70487503 + MIR SINE MIR 204 252 -10 * 243 217 0 0 chr18 16190015 16190061 -70487487 + L2 LINE L2 3227 3272 0 745 197 22 0 chr18 16190798 16190935 -70486613 + AluJo SINE Alu 2 141 -171 2156 111 14 0 chr18 16190935 16191269 -70486279 + AluSx SINE Alu 1 312 0 387 41 0 0 chr18 16191598 16191647 -70485901 + (CA)n Simple_repeat Simple_repeat 1 49 0 403 159 0 0 chr18 16191647 16191710 -70485838 - AluSq SINE Alu -114 199 137 2384 70 0 13 chr18 16193028 16193326 -70484222 + AluY SINE Alu 1 294 -17 2221 124 0 7 chr18 16193335 16193642 -70483906 + AluSx SINE Alu 1 305 -7 345 279 188 13 chr18 16194569 16194723 -70482825 + MER5A DNA MER1_type 9 189 0 324 232 239 32 chr18 16194725 16194916 -70482632 + MIR3 SINE MIR 9 211 -28 2542 68 0 0 chr18 16195262 16195573 -70481975 + AluY SINE Alu 1 311 0 345 346 16 16 chr18 16195835 16195962 -70481586 - MIR SINE MIR -109 153 27 319 206 16 0 chr18 16196016 16196079 -70481469 - MER5B DNA MER1_type 0 178 115 1559 216 27 12 chr18 16196080 16196562 -70480986 + L1ME2 LINE L1 5208 5703 -461 300 243 57 36 chr18 16196568 16196708 -70480840 - MLT1G LTR MaLR 0 590 448 332 171 185 122 chr18 16196746 16196951 -70480597 - MLT1G LTR MaLR -209 346 129 1358 168 94 83 chr18 16196956 16197330 -70480218 - MLT1B LTR MaLR -5 385 8 366 255 69 0 chr18 16197340 16197442 -70480106 - MLT1G LTR MaLR -472 118 10 1570 236 40 20 chr18 16197445 16197889 -70479659 + L1ME2 LINE L1 5705 6157 -7 2075 99 0 57 chr18 16198590 16198904 -70478644 - AluSx SINE Alu -16 296 1 488 283 111 60 chr18 16198950 16199501 -70478047 - L1ME4a LINE L1 0 6121 5543 387 320 151 33 chr18 16199815 16200057 -70477491 - L2 LINE L2 0 3313 3101 2187 135 0 0 chr18 16200057 16200353 -70477195 + AluSx SINE Alu 5 300 -12 387 320 151 33 chr18 16200353 16200593 -70476955 - L2 LINE L2 -212 3101 2688 709 141 0 0 chr18 16200593 16200692 -70476856 + AluJb SINE Alu 191 289 -23 221 231 19 0 chr18 16200696 16200748 -70476800 - L2 LINE L2 -621 2693 2641 2719 257 138 28 chr18 16200764 16201947 -70475601 - L2 LINE L2 -1136 2178 866 1097 288 120 18 chr18 16201959 16202417 -70475131 - L2 LINE L2 -2808 506 2 511 265 128 0 chr18 16202686 16202890 -70474658 - HAL1 LINE L1 -861 1646 1417 749 176 10 2 chr18 16203192 16203398 -70474150 - MER8 DNA MER2_type 0 239 1 1179 198 22 0 chr18 16204537 16204769 -70472779 - MLT1D LTR MaLR -268 237 1 187 176 29 0 chr18 16205241 16205275 -70472273 - L2 LINE L2 -14 3299 3265 240 263 0 0 chr18 16205933 16205990 -70471558 + MIR3 SINE MIR 151 207 -1 1079 228 58 69 chr18 16206723 16207122 -70470426 + LTR40a LTR ERVL 1 343 -119 983 154 0 6 chr18 16207131 16207293 -70470255 + FRAM SINE Alu 1 159 -17 2023 121 10 0 chr18 16207494 16207800 -70469748 - AluSx SINE Alu -3 309 1 1840 181 28 43 chr18 16208191 16208589 -70468959 - MLT2C1 LTR ERVL 0 397 6 2122 93 4 0 chr18 16208594 16208895 -70468653 + AluSc SINE Alu 1 302 0 10368 177 56 36 chr18 16208907 16209868 -70467680 - ERVL-C1 LTR ERVL -7 5757 4817 1636 168 0 48 chr18 16209868 16210177 -70467371 - AluJo SINE Alu -18 294 1 10368 177 56 36 chr18 16210177 16211358 -70466190 - ERVL-C1 LTR ERVL -947 4817 3572 * 10435 202 116 77 chr18 16211354 16211799 -70465749 - ERVL-C1 LTR ERVL -2652 3112 2685 1628 196 30 67 chr18 16211799 16212135 -70465413 + MLT1B LTR MaLR 1 321 -69 2089 114 10 0 chr18 16212135 16212433 -70465115 + AluSx SINE Alu 1 301 -11 1628 196 30 67 chr18 16212433 16212499 -70465049 + MLT1B LTR MaLR 321 388 -2 10435 202 116 77 chr18 16212499 16212740 -70464808 - ERVL-C1 LTR ERVL -3079 2685 2455 189 301 9 80 chr18 16212740 16212853 -70464695 + L3 LINE CR1 1460 1564 -13 10435 202 116 77 chr18 16212853 16213931 -70463617 - ERVL-C1 LTR ERVL -3309 2455 1420 183 219 0 24 chr18 16213931 16213972 -70463576 - L2 LINE L2 -40 3273 3234 10435 202 116 77 chr18 16213972 16215029 -70462519 - ERVL-C1 LTR ERVL -4344 1420 20 2197 73 0 10 chr18 16215029 16215330 -70462218 + AluY SINE Alu 1 298 -13 1368 187 36 70 chr18 16215376 16215734 -70461814 - MLT2C2 LTR ERVL 0 464 119 2085 113 0 3 chr18 16215752 16216062 -70461486 - AluSx SINE Alu -3 309 1 860 240 92 62 chr18 16216072 16216376 -70461172 + LTR47B LTR ERVL 31 343 -100 691 146 0 49 chr18 16216411 16216534 -70461014 + LTR47B LTR ERVL 327 443 0 836 122 0 0 chr18 16216534 16216657 -70460891 - MLT2C2 LTR ERVL -341 123 1 809 247 14 22 chr18 16216657 16216880 -70460668 + L1ME3A LINE L1 5948 6168 -2 1801 138 17 10 chr18 16217027 16217317 -70460231 - AluJo SINE Alu -19 293 2 2188 110 0 0 chr18 16217605 16217906 -70459642 - AluSx SINE Alu -11 301 1 287 261 108 23 chr18 16218361 16218491 -70459057 + LTR33A LTR ERVL 329 469 -54 * 376 203 2 2 chr18 16218490 16218580 -70458968 - AluS SINE Alu 0 301 226 801 112 15 37 chr18 16218601 16218735 -70458813 - AluSq/x SINE Alu -180 132 2 4495 143 28 8 chr18 16218735 16218782 -70458766 + L1MC1 LINE L1 5555 5600 -733 1660 140 50 20 chr18 16218782 16219082 -70458466 + AluJb SINE Alu 1 309 -3 4495 143 28 8 chr18 16219082 16219798 -70457750 + L1MC1 LINE L1 5600 6333 0 288 210 25 25 chr18 16219798 16219879 -70457669 - L1MC3 LINE L1 -1755 6030 5950 27 81 0 0 chr18 16219879 16219941 -70457607 + AT_rich Low_complexity Low_complexity 1 62 0 209 354 143 0 chr18 16220256 16220403 -70457145 + L2 LINE L2 202 369 -2945 414 228 11 67 chr18 16221027 16221207 -70456341 + (CGGGG)n Simple_repeat Simple_repeat 5 174 0 2185 67 0 58 chr18 16222152 16222479 -70455069 - AluSg SINE Alu -2 308 1 2573 42 0 3 chr18 16222755 16223066 -70454482 - AluY SINE Alu -1 310 1 1283 193 58 18 chr18 16223070 16223335 -70454213 - L1MB4 LINE L1 -43 6137 5849 1810 156 13 19 chr18 16223335 16223649 -70453899 - AluJb SINE Alu 0 312 1 1283 193 58 18 chr18 16223649 16223717 -70453831 - L1MB4 LINE L1 -331 5849 5785 327 330 119 23 chr18 16223867 16224043 -70453505 - L1MB4 LINE L1 -400 5721 5529 978 145 75 6 chr18 16224139 16224298 -70453250 - FAM SINE Alu -4 171 2 882 246 112 14 chr18 16224333 16224618 -70452930 - MER82 DNA MER2_type 0 653 341 239 182 0 171 chr18 16224660 16224716 -70452832 + L2 LINE L2 3241 3278 -35 2089 108 0 0 chr18 16224716 16225004 -70452544 - AluSx SINE Alu -24 288 1 239 182 0 171 chr18 16225004 16225035 -70452513 + L2 LINE L2 3278 3313 0 2061 106 10 7 chr18 16225541 16225843 -70451705 - AluSx SINE Alu -9 303 1 2729 194 86 73 chr18 16225850 16226085 -70451463 - L1ME1 LINE L1 -18 6148 5917 2272 100 0 0 chr18 16226085 16226395 -70451153 - AluSx SINE Alu -2 310 1 2729 194 86 73 chr18 16226395 16226966 -70450582 - L1ME1 LINE L1 -249 5917 5332 646 204 22 0 chr18 16226980 16227117 -70450431 - L1MB5 LINE L1 -9 6165 6026 1476 212 0 7 chr18 16227787 16228079 -70449469 - AluJb SINE Alu -20 292 3 1093 170 13 13 chr18 16228107 16228331 -70449217 - L1MB7 LINE L1 -16 6168 5945 38 22 0 0 chr18 16228831 16228876 -70448672 + AT_rich Low_complexity Low_complexity 1 45 0 2338 64 7 0 chr18 16228881 16229176 -70448372 + AluY SINE Alu 1 297 -14 415 211 125 39 chr18 16229205 16229309 -70448239 + AluJo SINE Alu 120 232 -70 1644 53 5 5 chr18 16230187 16230394 -70447154 + AluY SINE Alu 89 295 -16 2255 95 0 0 chr18 16230459 16230754 -70446794 + AluSp SINE Alu 1 295 -18 309 311 17 34 chr18 16230791 16230910 -70446638 + MIR3 SINE MIR 66 182 -26 1345 141 38 0 chr18 16231094 16231307 -70446241 - AluJb SINE Alu -77 235 15 4312 160 57 29 chr18 16231328 16231384 -70446164 - L1MB4 LINE L1 0 6180 6127 2165 115 0 6 chr18 16231384 16231698 -70445850 - AluSx SINE Alu 0 312 1 4312 160 57 29 chr18 16231698 16232567 -70444981 - L1MB4 LINE L1 -53 6127 5239 617 126 29 10 chr18 16232567 16232670 -70444878 - MER46A DNA MER2_type -1 235 131 683 104 10 0 chr18 16232696 16232792 -70444756 - AluJ/FLAM SINE Alu -214 98 2 870 194 0 0 chr18 16232793 16232937 -70444611 - MER46A DNA MER2_type -92 144 1 464 194 69 69 chr18 16232796 16232956 -70444592 + MER46A DNA MER2_type 4 163 -73 * 765 183 27 21 chr18 16232956 16233142 -70444406 - L1MB4 LINE L1 -924 5222 5036 292 214 55 76 chr18 16233143 16233288 -70444260 - LTR26 LTR ERV1 0 603 462 816 187 43 16 chr18 16233654 16233841 -70443707 - L1MB4 LINE L1 -1212 4934 4743 4273 148 35 4 chr18 16234114 16234803 -70442745 - MER50 LTR ERV1 -24 710 1 1833 143 3 0 chr18 16234988 16235275 -70442273 - AluSx SINE Alu -21 291 4 1454 166 90 11 chr18 16235426 16235703 -70441845 + AluJo SINE Alu 1 299 -13 1690 166 0 16 chr18 16235768 16236081 -70441467 - AluJo SINE Alu 0 312 5 255 283 208 9 chr18 16236323 16236429 -70441119 - MIR SINE MIR -133 129 3 26 30 0 0 chr18 16236438 16236471 -70441077 + AT_rich Low_complexity Low_complexity 1 33 0 180 179 77 0 chr18 16236825 16236864 -70440684 + L2 LINE L2 110 151 -3163 231 36 0 0 chr18 16237017 16237045 -70440503 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1833 150 0 0 chr18 16237045 16237325 -70440223 - AluSx SINE Alu -32 280 1 310 248 8 40 chr18 16237349 16237474 -70440074 - L1MC4a LINE L1 -1916 5892 5772 21 0 0 0 chr18 16237686 16237707 -70439841 + AT_rich Low_complexity Low_complexity 1 21 0 272 245 32 90 chr18 16237887 16237946 -70439602 - HAL1b LINE L1 -411 937 876 2091 115 0 10 chr18 16237946 16238251 -70439297 - AluSx SINE Alu -10 302 1 272 245 32 90 chr18 16238251 16238319 -70439229 - HAL1b LINE L1 -472 876 822 2336 75 3 0 chr18 16238319 16238624 -70438924 - AluY SINE Alu -5 306 1 272 245 32 90 chr18 16238624 16238683 -70438865 - HAL1b LINE L1 -526 822 761 329 251 147 21 chr18 16238829 16239020 -70438528 - HAL1 LINE L1 -860 1647 1433 238 249 132 71 chr18 16239381 16239392 -70438156 - HAL1 LINE L1 -1126 1381 1372 2181 103 3 6 chr18 16239392 16239704 -70437844 - AluSx SINE Alu -1 311 1 238 249 132 71 chr18 16239704 16239715 -70437833 - HAL1 LINE L1 -1135 1372 1363 1326 177 57 23 chr18 16239715 16240014 -70437534 - AluJb SINE Alu -3 309 1 238 249 132 71 chr18 16240014 16240408 -70437140 - HAL1 LINE L1 -1144 1363 921 2368 200 82 38 chr18 16240408 16240944 -70436604 + MER82 DNA MER2_type 1 569 -84 2197 110 7 0 chr18 16240944 16241253 -70436295 + AluSx SINE Alu 1 311 -1 2368 200 82 38 chr18 16241253 16241341 -70436207 + MER82 DNA MER2_type 569 652 -1 238 249 132 71 chr18 16241341 16241459 -70436089 - HAL1 LINE L1 -1586 921 812 1857 117 22 0 chr18 16242245 16242519 -70435029 + AluSp SINE Alu 1 280 -33 21 0 0 0 chr18 16242520 16242541 -70435007 + GC_rich Low_complexity Low_complexity 1 21 0 715 124 83 33 chr18 16242595 16242716 -70434832 + FLAM_A SINE Alu 1 127 -6 2208 108 0 0 chr18 16242720 16243015 -70434533 + AluSc SINE Alu 1 295 -14 1088 123 12 0 chr18 16243058 16243220 -70434328 + AluSg/x SINE Alu 137 300 -12 31 26 0 0 chr18 16243281 16243319 -70434229 + AT_rich Low_complexity Low_complexity 1 38 0 1649 162 13 26 chr18 16243724 16244032 -70433516 - AluJo SINE Alu -3 309 6 205 348 0 33 chr18 16244652 16244744 -70432804 - L2 LINE L2 -6 3307 3219 1683 70 0 5 chr18 16244744 16244958 -70432590 + AluSq SINE Alu 82 294 -19 305 284 163 7 chr18 16245082 16245223 -70432325 - L2 LINE L2 -195 3077 2915 360 255 75 78 chr18 16245396 16245690 -70431858 - L2 LINE L2 -649 2665 2373 1485 179 0 8 chr18 16246236 16246493 -70431055 + AluJb SINE Alu 1 255 -57 2256 86 14 0 chr18 16246620 16246912 -70430636 - AluSx SINE Alu -16 296 1 449 322 55 40 chr18 16247031 16247230 -70430318 - MLT1L LTR MaLR -75 540 339 2160 114 0 0 chr18 16247582 16247890 -70429658 - AluSc SINE Alu -1 308 1 347 234 181 32 chr18 16248058 16248237 -70429311 - MIR SINE MIR -56 206 6 2252 103 3 0 chr18 16248294 16248604 -70428944 - AluSp SINE Alu -2 311 1 304 272 143 0 chr18 16249204 16249351 -70428197 - L2 LINE L2 -863 2451 2284 898 217 75 37 chr18 16249362 16249776 -70427772 - MLT1E LTR MaLR -3 590 1 181 217 67 50 chr18 16249824 16249884 -70427664 - MIR SINE MIR -196 66 6 2259 52 3 39 chr18 16249996 16250303 -70427245 + AluY SINE Alu 1 296 -15 242 243 0 14 chr18 16250308 16250378 -70427170 - MER5A DNA MER1_type -83 106 38 2123 93 36 0 chr18 16250756 16251035 -70426513 + AluSq SINE Alu 2 290 -23 1839 173 3 0 chr18 16251140 16251440 -70426108 - AluJo SINE Alu -11 301 1 1186 182 25 125 chr18 16251518 16251951 -70425597 - MLT1B LTR MaLR 0 390 1 7174 53 5 21 chr18 16252380 16253298 -70424250 - SVA Other Other 0 1386 483 1200 84 57 58 chr18 16253412 16254005 -70423543 - SVA Other Other -520 866 433 3951 35 0 214 chr18 16254023 16254832 -70422716 - SVA Other Other -520 866 231 2223 114 0 19 chr18 16255163 16255478 -70422070 - AluSx SINE Alu -3 309 1 213 121 0 0 chr18 16255750 16255783 -70421765 + (TATATG)n Simple_repeat Simple_repeat 6 38 0 23 68 0 0 chr18 16258986 16259030 -70418518 + AT_rich Low_complexity Low_complexity 1 44 0 23 86 0 0 chr18 16259865 16259923 -70417625 + AT_rich Low_complexity Low_complexity 1 58 0 300 321 0 0 chr18 16260040 16260171 -70417377 + T-rich Low_complexity Low_complexity 1 131 0 180 0 0 0 chr18 16260240 16260260 -70417288 + (TCC)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr18 16260865 16260887 -70416661 + (T)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr18 16260958 16260982 -70416566 + AT_rich Low_complexity Low_complexity 1 24 0 1818 147 10 16 chr18 16261507 16261814 -70415734 - AluJo SINE Alu -7 305 1 263 242 158 11 chr18 16262108 16262203 -70415345 - L2 LINE L2 -25 3288 3180 870 241 57 24 chr18 16262681 16262932 -70414616 - MIR SINE MIR -1 261 5 397 154 53 12 chr18 16263516 16263685 -70413863 + (TG)n Simple_repeat Simple_repeat 2 177 0 200 318 131 19 chr18 16266099 16266206 -70411342 + L2 LINE L2 3152 3270 -2 640 145 14 80 chr18 16266654 16266792 -70410756 + MER2 DNA MER2_type 3 131 -214 828 186 13 6 chr18 16266792 16266948 -70410600 - FAM SINE Alu -19 166 10 458 255 117 32 chr18 16266978 16267166 -70410382 + MIR SINE MIR 30 233 -29 187 214 24 24 chr18 16267237 16267279 -70410269 - L2 LINE L2 -49 3223 3182 723 313 147 6 chr18 16267358 16267671 -70409877 - L2 LINE L2 0 3313 2957 260 340 165 5 chr18 16267744 16267956 -70409592 - L2 LINE L2 -548 2766 2521 2662 26 3 13 chr18 16268363 16268673 -70408875 - AluY SINE Alu -4 307 1 2763 264 94 30 chr18 16268826 16270513 -70407035 - L2 LINE L2 0 3313 1513 3318 95 26 51 chr18 16270517 16271023 -70406525 - LTR15 LTR ERV1 0 493 1 2024 147 0 13 chr18 16271034 16271334 -70406214 - AluSx SINE Alu -16 296 1 450 213 195 41 chr18 16271680 16271849 -70405699 + MIR SINE MIR 2 196 -66 377 257 44 0 chr18 16272156 16272269 -70405279 + MER113 DNA MER1_type? 3 120 -401 243 0 0 0 chr18 16273401 16273428 -70404120 + (T)n Simple_repeat Simple_repeat 1 27 0 762 200 0 16 chr18 16273444 16273569 -70403979 - FLAM_C SINE Alu -10 123 1 2234 94 7 0 chr18 16273982 16274270 -70403278 + AluSx SINE Alu 1 290 -22 2054 99 0 57 chr18 16275013 16275327 -70402221 - AluSx SINE Alu -16 296 1 248 265 122 71 chr18 16275373 16275924 -70401624 - L1ME4a LINE L1 0 6121 5543 519 297 173 35 chr18 16276238 16276480 -70401068 - L2 LINE L2 0 3313 3106 2226 134 0 0 chr18 16276480 16276785 -70400763 + AluSx SINE Alu 5 309 -3 519 297 173 35 chr18 16276785 16277017 -70400531 - L2 LINE L2 -207 3106 2688 748 141 0 0 chr18 16277017 16277116 -70400432 + AluJb SINE Alu 191 289 -23 210 250 18 0 chr18 16277116 16277172 -70400376 - L2 LINE L2 -617 2697 2641 2614 257 138 28 chr18 16277188 16278371 -70399177 - L2 LINE L2 -1136 2178 866 1067 288 120 18 chr18 16278383 16278841 -70398707 - L2 LINE L2 -2808 506 2 552 265 128 0 chr18 16279110 16279314 -70398234 - HAL1 LINE L1 -861 1646 1417 752 194 9 1 chr18 16279616 16279822 -70397726 - MER8 DNA MER2_type 0 239 1 1823 154 0 20 chr18 16282012 16282318 -70395230 - AluJb SINE Alu -12 300 1 734 180 0 43 chr18 16282327 16282466 -70395082 - FLAM_A SINE Alu 0 133 1 2151 130 0 0 chr18 16282860 16283153 -70394395 + AluSx SINE Alu 1 293 -19 1491 173 101 0 chr18 16283198 16283475 -70394073 + AluJb SINE Alu 1 305 -7 1394 258 28 80 chr18 16283782 16283874 -70393674 + L1MC1 LINE L1 5112 5207 -1126 2386 81 3 0 chr18 16283874 16284172 -70393376 + AluSp SINE Alu 1 299 -14 1394 258 28 80 chr18 16284172 16285470 -70392078 + L1MC1 LINE L1 5207 6004 -329 3964 166 36 54 chr18 16284174 16284254 -70393294 + L1MB7 LINE L1 5361 5441 -743 2382 104 0 0 chr18 16284254 16284563 -70392985 + AluSx SINE Alu 1 309 -3 3964 166 36 54 chr18 16284563 16284822 -70392726 + L1MB7 LINE L1 5441 5703 -481 1626 147 21 39 chr18 16284822 16285137 -70392411 - AluSx SINE Alu 0 310 1 3964 166 36 54 chr18 16285137 16285609 -70391939 + L1MB7 LINE L1 5703 6159 -25 306 244 179 8 chr18 16285617 16285848 -70391700 - L1MC4 LINE L1 -48 7994 7612 276 321 22 0 chr18 16285950 16286084 -70391464 - L1MC5 LINE L1 -524 7437 7301 269 271 114 14 chr18 16286466 16286606 -70390942 - MLT1K LTR MaLR -53 535 382 319 200 23 123 chr18 16286606 16286736 -70390812 + L2 LINE L2 3191 3307 -6 1105 235 23 5 chr18 16287225 16287442 -70390106 + MER58A DNA MER1_type 1 221 -3 25 31 0 0 chr18 16287530 16287562 -70389986 + AT_rich Low_complexity Low_complexity 1 32 0 2297 111 0 0 chr18 16289057 16289355 -70388193 - AluSx SINE Alu -14 298 1 367 325 27 32 chr18 16289566 16289754 -70387794 - L2 LINE L2 -337 2977 2791 264 211 0 0 chr18 16289811 16289863 -70387685 - MER46C DNA MER2_type -286 52 1 233 372 9 0 chr18 16289867 16289980 -70387568 - L1ME LINE L1 -444 5957 5844 194 150 25 0 chr18 16290086 16290126 -70387422 + CT-rich Low_complexity Low_complexity 3 43 0 1684 262 87 62 chr18 16290827 16291735 -70385813 - L1MC4 LINE L1 -23 8019 7089 22 0 0 0 chr18 16291977 16291999 -70385549 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 16293068 16293090 -70384458 + AT_rich Low_complexity Low_complexity 1 22 0 4391 198 38 40 chr18 16293090 16293131 -70384417 - L1MB2 LINE L1 -3 6168 6128 2062 118 38 0 chr18 16293131 16293420 -70384128 - AluSx SINE Alu -12 300 1 4391 198 38 40 chr18 16293420 16295304 -70382244 - L1MB2 LINE L1 -43 6128 4257 3535 229 43 43 chr18 16295274 16295677 -70381871 - L1ME LINE L1 -1086 5060 4658 * 2195 137 0 6 chr18 16295677 16295990 -70381558 - AluSx SINE Alu -1 311 1 3535 229 43 43 chr18 16295990 16297241 -70380307 - L1ME LINE L1 -1488 4658 3442 10866 173 71 37 chr18 16297257 16297761 -70379787 - L1MCa LINE L1 -3452 2974 2488 2228 103 0 0 chr18 16297761 16298070 -70379478 - AluSc SINE Alu 0 309 1 2177 120 0 7 chr18 16298072 16298381 -70379167 - AluSx SINE Alu -5 307 1 10866 173 71 37 chr18 16298381 16298519 -70379029 - L1MCa LINE L1 -3938 2488 2356 1783 170 7 0 chr18 16298519 16298826 -70378722 - AluJo SINE Alu 0 309 1 10866 173 71 37 chr18 16298826 16301038 -70376510 - L1MCa LINE L1 -4070 2356 5 1191 216 71 51 chr18 16301248 16301697 -70375851 - MLT1C LTR MaLR 0 467 10 2315 74 0 0 chr18 16301816 16302129 -70375419 - AluSq SINE Alu 0 313 1 201 328 16 16 chr18 16302159 16302223 -70375325 - MIR SINE MIR -169 93 30 2789 13 0 0 chr18 16304553 16304856 -70372692 - AluYa5 SINE Alu -8 303 1 1314 243 55 82 chr18 16305826 16306439 -70371109 + L1ME3A LINE L1 5521 6117 -53 841 304 89 21 chr18 16306585 16307204 -70370344 + L1MC4a LINE L1 5340 6000 -1808 2332 80 0 38 chr18 16307835 16308148 -70369400 + AluY SINE Alu 1 301 -10 2764 81 0 6 chr18 16308579 16308936 -70368612 - THE1A LTR MaLR 0 355 1 1869 166 0 3 chr18 16309172 16309467 -70368081 + AluJb SINE Alu 1 294 -18 1801 156 14 0 chr18 16310869 16311151 -70366397 - AluJo SINE Alu -14 298 13 625 210 0 0 chr18 16311314 16311433 -70366115 - FLAM_A SINE Alu -10 132 14 425 324 86 8 chr18 16312028 16312227 -70365321 + MIR SINE MIR 45 262 0 2225 97 7 7 chr18 16312482 16312780 -70364768 + AluSx SINE Alu 1 298 -14 190 276 67 52 chr18 16312842 16312976 -70364572 - L2 LINE L2 -330 2942 2807 26 50 0 0 chr18 16314622 16314662 -70362886 + AT_rich Low_complexity Low_complexity 1 40 0 1970 118 43 26 chr18 16314870 16315174 -70362374 - AluSx SINE Alu -3 309 1 498 271 129 17 chr18 16315793 16316226 -70361322 - L1ME3A LINE L1 0 6239 5753 543 250 120 3 chr18 16316259 16316663 -70360885 - L1ME3A LINE L1 -548 5691 5245 1659 266 107 51 chr18 16316663 16317170 -70360378 - L1ME3A LINE L1 -1234 4981 4504 1562 56 47 0 chr18 16317170 16317385 -70360163 - L1MA2 LINE L1 0 6304 6080 1659 266 107 51 chr18 16317385 16318601 -70358947 - L1ME3A LINE L1 -1711 4504 3136 372 293 85 18 chr18 16318669 16318833 -70358715 - L1ME3A LINE L1 -3297 2918 2744 247 283 50 0 chr18 16318914 16319013 -70358535 - L1ME3A LINE L1 -3597 2618 2515 584 248 132 9 chr18 16319072 16319302 -70358246 - L1MEc LINE L1 -3714 2501 2301 2264 131 103 3 chr18 16319302 16319691 -70357857 - MSTA LTR MaLR 0 428 1 584 248 132 9 chr18 16319691 16319894 -70357654 - L1MEc LINE L1 -3914 2301 2062 241 253 116 7 chr18 16320149 16320295 -70357253 - L1MEc LINE L1 -4688 1708 1547 237 269 74 29 chr18 16320818 16320993 -70356555 - L1MEc LINE L1 -5934 271 89 3440 193 41 7 chr18 16321402 16322111 -70355437 + MER44D DNA MER2_type 1 605 0 21 0 0 0 chr18 16323214 16323235 -70354313 + AT_rich Low_complexity Low_complexity 1 21 0 2274 112 0 0 chr18 16323883 16324187 -70353361 - AluSx SINE Alu -8 304 1 250 298 101 18 chr18 16324279 16324507 -70353041 - HAL1b LINE L1 -849 499 253 267 79 0 0 chr18 16324659 16324697 -70352851 + (TG)n Simple_repeat Simple_repeat 1 38 0 2372 82 7 0 chr18 16324846 16325150 -70352398 - AluY SINE Alu -5 306 1 301 221 70 42 chr18 16325303 16325478 -70352070 + MLT1H LTR MaLR 1 140 -409 462 245 141 41 chr18 16325580 16325870 -70351678 - L1ME LINE L1 -297 5824 5506 1686 182 7 7 chr18 16326992 16327299 -70350249 - AluJo SINE Alu -5 307 1 852 131 0 0 chr18 16327311 16327433 -70350115 - FLAM_C SINE Alu -9 124 3 331 351 32 19 chr18 16327434 16327588 -70349960 - L2 LINE L2 -599 2715 2560 300 267 250 0 chr18 16327837 16327953 -70349595 + MIR SINE MIR 7 151 -111 2454 80 0 3 chr18 16328303 16328603 -70348945 + AluSq SINE Alu 1 299 -14 24 32 0 0 chr18 16331238 16331269 -70346279 + AT_rich Low_complexity Low_complexity 1 31 0 24 53 0 0 chr18 16332755 16332793 -70344755 + AT_rich Low_complexity Low_complexity 1 38 0 455 274 29 29 chr18 16333067 16333242 -70344306 + MER5B DNA MER1_type 4 178 0 2807 154 93 20 chr18 16333367 16333927 -70343621 - MER7C DNA MER2_type 0 602 2 1914 169 7 3 chr18 16333952 16334248 -70343300 + AluJo SINE Alu 3 299 -13 2101 136 0 0 chr18 16334347 16334641 -70342907 + AluSx SINE Alu 1 294 -18 742 245 10 16 chr18 16335006 16335198 -70342350 - MER20 DNA MER1_type 0 219 29 357 159 29 14 chr18 16335383 16335452 -70342096 - MER5B DNA MER1_type 0 178 109 335 254 174 35 chr18 16335722 16335895 -70341653 - L1ME LINE L1 -557 5609 5410 7041 123 39 10 chr18 16335909 16337128 -70340420 - L1MA1 LINE L1 -6 6296 5114 2401 90 0 0 chr18 16337128 16337427 -70340121 - AluSg SINE Alu -11 299 1 7041 123 39 10 chr18 16337427 16337639 -70339909 - L1MA1 LINE L1 -1188 5114 4910 2492 67 0 3 chr18 16337639 16337939 -70339609 + AluY SINE Alu 1 299 -12 7041 123 39 10 chr18 16337939 16338486 -70339062 - L1MA1 LINE L1 -1392 4910 4255 432 0 0 0 chr18 16340271 16340319 -70337229 + (TG)n Simple_repeat Simple_repeat 1 48 0 1368 173 53 17 chr18 16340330 16340630 -70336918 - MER2 DNA MER2_type 0 345 35 2213 100 14 0 chr18 16343198 16343488 -70334060 + AluSx SINE Alu 1 294 -18 1521 181 72 23 chr18 16346864 16347212 -70330336 - MLT1A1 LTR MaLR 0 365 1 1147 185 75 90 chr18 16348341 16348604 -70328944 + MSTD LTR MaLR 1 257 -139 2372 72 0 3 chr18 16348604 16348896 -70328652 + AluSc SINE Alu 1 291 -18 1147 185 75 90 chr18 16348896 16349032 -70328516 + MSTD LTR MaLR 257 394 -2 385 299 61 49 chr18 16349048 16349212 -70328336 - MIR SINE MIR -74 188 23 840 210 14 23 chr18 16349269 16349483 -70328065 + MER20 DNA MER1_type 1 212 -7 2140 96 38 0 chr18 16349543 16349834 -70327714 - AluSc SINE Alu -7 302 1 2139 123 3 0 chr18 16350101 16350402 -70327146 - AluSx SINE Alu -10 302 1 1292 139 98 0 chr18 16350562 16350777 -70326771 + MER46A DNA MER2_type 1 236 0 299 255 38 9 chr18 16351104 16351210 -70326338 - L1MC4 LINE L1 -1 8041 7933 24 0 0 0 chr18 16351241 16351265 -70326283 + AT_rich Low_complexity Low_complexity 1 24 0 5718 46 4 0 chr18 16351265 16351945 -70325603 - L1PA7 LINE L1 -11 6143 5461 207 0 0 0 chr18 16351946 16351969 -70325579 + (TTG)n Simple_repeat Simple_repeat 2 24 0 23623 56 13 2 chr18 16351969 16355765 -70321783 - L1PA6 LINE L1 -16 6138 2310 515 266 5 27 chr18 16356233 16356417 -70321131 + AluJb SINE Alu 120 299 -13 375 127 55 55 chr18 16356418 16356476 -70321072 - Tigger3b DNA MER2_type -2271 758 698 1599 167 0 21 chr18 16356476 16356764 -70320784 - AluJo SINE Alu -30 282 1 375 127 55 55 chr18 16356764 16356815 -70320733 - Tigger3b DNA MER2_type -2330 699 649 1253 197 8 0 chr18 16356818 16357052 -70320496 + AluJb SINE Alu 6 241 -71 2658 158 49 32 chr18 16357056 16357576 -70319972 - MER41B LTR ERV1 -9 596 101 320 188 0 0 chr18 16357576 16357640 -70319908 + AluJb SINE Alu 237 300 -2 2450 106 35 60 chr18 16357686 16357825 -70319723 - Tigger3b DNA MER2_type -2365 663 522 760 177 23 0 chr18 16357825 16357955 -70319593 + FLAM_A SINE Alu 1 133 0 2450 106 35 60 chr18 16357955 16358279 -70319269 - Tigger3b DNA MER2_type -2506 522 212 276 30 0 0 chr18 16358279 16358312 -70319236 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1437 179 11 7 chr18 16358313 16358587 -70318961 - AluSx SINE Alu -32 280 6 1302 190 9 0 chr18 16358588 16358809 -70318739 - Tigger3b DNA MER2_type -1003 228 6 248 0 31 0 chr18 16358826 16358858 -70318690 + (GA)n Simple_repeat Simple_repeat 2 34 0 1321 208 170 43 chr18 16358858 16359257 -70318291 - MLT2B1 LTR ERVL -69 451 2 1857 315 82 58 chr18 16359521 16359769 -70317779 - ERVL LTR ERVL -2620 3144 2903 1903 147 7 0 chr18 16359769 16360076 -70317472 - AluSx SINE Alu -3 309 1 1857 315 82 58 chr18 16360076 16360502 -70317046 - ERVL LTR ERVL -2861 2903 2489 2076 124 0 0 chr18 16360502 16360800 -70316748 - AluSg SINE Alu -12 298 1 183 80 0 0 chr18 16360800 16360825 -70316723 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2240 78 0 0 chr18 16360825 16361108 -70316440 - AluSx SINE Alu -28 284 2 1857 315 82 58 chr18 16361108 16361550 -70315998 - ERVL LTR ERVL -3274 2490 1998 334 301 0 0 chr18 16361679 16361762 -70315786 - ERVL LTR ERVL -3853 1801 1719 508 349 65 11 chr18 16362041 16362316 -70315232 - ERVL LTR ERVL -3659 1337 1048 351 293 38 25 chr18 16363269 16363426 -70314122 - LTR16C LTR ERVL -3 488 330 644 156 8 0 chr18 16363463 16363591 -70313957 + CT-rich Low_complexity Low_complexity 1 129 0 2127 119 0 0 chr18 16363591 16363884 -70313664 - AluSx SINE Alu -19 293 1 1649 152 25 32 chr18 16363941 16364260 -70313288 + AluJb SINE Alu 1 317 0 288 0 0 0 chr18 16364320 16364352 -70313196 + (CGG)n Simple_repeat Simple_repeat 3 34 0 369 212 0 1 chr18 16365599 16365668 -70311880 + AluJ/FLAM SINE Alu 1 62 -240 1873 156 3 0 chr18 16365773 16366074 -70311474 + AluJb SINE Alu 1 302 -10 1153 254 35 71 chr18 16366158 16366552 -70310996 + LTR16C LTR ERVL 112 491 0 251 181 68 105 chr18 16366561 16366629 -70310919 + L1M1 LINE L1 5615 5684 -437 1547 114 34 14 chr18 16366629 16366926 -70310622 + AluSp SINE Alu 1 303 -10 251 181 68 105 chr18 16366926 16367004 -70310544 + L1M1 LINE L1 5684 5755 -366 2279 60 0 0 chr18 16367035 16367341 -70310207 - AluY SINE Alu 0 306 1 307 364 31 52 chr18 16367430 16367665 -70309883 - L2 LINE L2 -710 2604 2375 2235 93 3 0 chr18 16367665 16367966 -70309582 - AluSq SINE Alu -11 302 1 307 364 31 52 chr18 16367966 16368016 -70309532 - L2 LINE L2 -939 2375 2325 234 150 0 0 chr18 16368089 16368129 -70309419 + MLT1D LTR MaLR 466 505 0 810 239 69 62 chr18 16368158 16368447 -70309101 + LTR33 LTR ERVL 231 521 0 1652 163 21 7 chr18 16368575 16368864 -70308684 + AluJo SINE Alu 6 298 -14 691 260 69 10 chr18 16369691 16370014 -70307534 - L1ME LINE L1 -702 5468 5122 987 214 131 48 chr18 16370169 16370581 -70306967 - MLT1C LTR MaLR -16 451 6 381 224 28 37 chr18 16370590 16370697 -70306851 - LTR41 LTR ERVL -328 445 340 890 182 13 0 chr18 16370742 16370901 -70306647 - LTR41 LTR ERVL -612 161 1 997 144 6 6 chr18 16370977 16371137 -70306411 - AluSg/x SINE Alu -16 296 137 1479 165 84 0 chr18 16371137 16371398 -70306150 - AluSg SINE Alu -21 289 7 2606 26 0 0 chr18 16371409 16371713 -70305835 - AluY SINE Alu -7 304 1 24 0 0 0 chr18 16372072 16372096 -70305452 + AT_rich Low_complexity Low_complexity 1 24 0 792 188 27 116 chr18 16372124 16372417 -70305131 - L1ME3 LINE L1 -3 6159 5893 312 260 120 108 chr18 16372422 16372674 -70304874 - L1ME LINE L1 -1228 4918 4659 1611 239 75 64 chr18 16372675 16373148 -70304400 - L1M4 LINE L1 -1328 4818 4352 2062 84 42 0 chr18 16373148 16373433 -70304115 + AluY SINE Alu 2 298 -13 1611 239 75 64 chr18 16373433 16373500 -70304048 - L1M4 LINE L1 -1794 4352 4287 873 154 0 0 chr18 16373500 16373630 -70303918 - FLAM_C SINE Alu -3 130 1 1611 239 75 64 chr18 16373630 16373834 -70303714 - L1M4 LINE L1 -1859 4287 4065 1794 251 114 6 chr18 16373838 16374388 -70303160 + L1ME3A LINE L1 5556 6165 -5 1442 201 42 45 chr18 16374558 16374917 -70302631 - MLT1A1 LTR MaLR -5 360 3 617 262 17 12 chr18 16375607 16375779 -70301769 - MER5A DNA MER1_type 0 189 17 679 218 90 0 chr18 16376268 16376424 -70301124 + MER3 DNA MER1_type 1 123 -86 243 200 0 38 chr18 16377039 16377119 -70300429 + (CCCCG)n Simple_repeat Simple_repeat 5 81 0 22 0 0 0 chr18 16377562 16377584 -70299964 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr18 16377724 16377755 -70299793 + GC_rich Low_complexity Low_complexity 1 31 0 23 33 0 0 chr18 16377867 16377897 -70299651 + GC_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr18 16377946 16377967 -70299581 + GC_rich Low_complexity Low_complexity 1 21 0 423 264 176 8 chr18 16378193 16378432 -70299116 - L1ME2 LINE L1 -9 6155 5877 201 372 16 0 chr18 16379339 16379460 -70298088 - L2 LINE L2 0 3313 3191 218 230 264 0 chr18 16379500 16379587 -70297961 - L2 LINE L2 0 3272 3163 1996 112 7 7 chr18 16380007 16380294 -70297254 - AluSx SINE Alu -17 295 9 243 338 91 7 chr18 16380301 16380455 -70297093 - L2 LINE L2 -595 2719 2553 698 302 184 22 chr18 16380500 16381039 -70296509 - L2 LINE L2 -955 2359 1734 349 292 151 53 chr18 16381035 16381368 -70296180 + L2 LINE L2 2701 3068 -204 * 289 258 16 0 chr18 16381918 16381980 -70295568 + L2 LINE L2 3249 3311 -2 220 316 75 30 chr18 16382007 16382140 -70295408 - L2 LINE L2 -1638 1676 1538 868 219 12 0 chr18 16382152 16382321 -70295227 + AluJb SINE Alu 135 305 -7 660 156 15 67 chr18 16382578 16382713 -70294835 - FRAM SINE Alu -7 169 42 2101 100 0 17 chr18 16382770 16383070 -70294478 - AluSx SINE Alu -17 295 1 1525 168 75 7 chr18 16383073 16383400 -70294148 - AluJb SINE Alu 0 347 1 2197 71 6 59 chr18 16383401 16383725 -70293823 - AluY SINE Alu -4 307 1 276 312 88 16 chr18 16384174 16384299 -70293249 + L2 LINE L2 3138 3271 -1 401 280 126 7 chr18 16384312 16384455 -70293093 - MIR3 SINE MIR -14 194 35 1273 167 40 57 chr18 16384976 16385276 -70292272 - AluJo SINE Alu -17 295 1 593 108 0 0 chr18 16385287 16385370 -70292178 - AluJo SINE Alu -9 303 221 * 812 182 81 0 chr18 16385369 16385517 -70292031 - AluJo SINE Alu -151 161 2 7381 24 0 334 chr18 16386128 16388209 -70289339 - SVA Other Other 0 1386 1 2207 107 0 0 chr18 16388217 16388516 -70289032 - AluSx SINE Alu -13 299 1 268 81 27 0 chr18 16388867 16388904 -70288644 + Alu SINE Alu 1 38 -264 1906 137 19 3 chr18 16389376 16389683 -70287865 - AluSx SINE Alu 0 312 1 462 261 150 39 chr18 16389683 16389989 -70287559 + L1MC4a LINE L1 4963 5302 -844 526 261 153 5 chr18 16389992 16390382 -70287166 + L1MC4a LINE L1 5356 5923 -1885 21 57 0 0 chr18 16390603 16390638 -70286910 + AT_rich Low_complexity Low_complexity 1 35 0 2377 63 0 3 chr18 16390647 16390947 -70286601 + AluY SINE Alu 2 300 -11 333 0 0 0 chr18 16390955 16390992 -70286556 + (TC)n Simple_repeat Simple_repeat 2 38 0 * 1107 123 0 0 chr18 16390991 16391196 -70286352 + (TA)n Simple_repeat Simple_repeat 1 205 0 25 51 0 0 chr18 16391890 16391929 -70285619 + AT_rich Low_complexity Low_complexity 1 39 0 1482 183 56 0 chr18 16391998 16392283 -70285265 + AluJo SINE Alu 3 303 -9 1907 140 7 0 chr18 16392289 16392589 -70284959 - AluSx SINE Alu -10 302 1 490 104 0 0 chr18 16392654 16392721 -70284827 + AluS SINE Alu 1 67 -246 * 623 82 0 12 chr18 16392719 16392804 -70284744 - AluY SINE Alu -226 85 2 1964 108 0 38 chr18 16392909 16393224 -70284324 + AluSx SINE Alu 9 311 -1 1475 177 0 18 chr18 16394103 16394421 -70283127 - AluJo SINE Alu 0 317 5 236 284 202 18 chr18 16394660 16394769 -70282779 - MIR SINE MIR -131 131 3 26 30 0 0 chr18 16394778 16394811 -70282737 + AT_rich Low_complexity Low_complexity 1 33 0 180 179 77 0 chr18 16395165 16395204 -70282344 + L2 LINE L2 110 151 -3163 231 36 0 0 chr18 16395356 16395384 -70282164 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 1833 150 0 0 chr18 16395384 16395664 -70281884 - AluSx SINE Alu -32 280 1 310 248 8 40 chr18 16395688 16395813 -70281735 - L1MC4a LINE L1 -1916 5892 5772 21 0 0 0 chr18 16396025 16396046 -70281502 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr18 16396206 16396237 -70281311 + AT_rich Low_complexity Low_complexity 1 31 0 1929 108 0 41 chr18 16396454 16396770 -70280778 + AluSx SINE Alu 9 311 -1 1355 132 11 95 chr18 16397649 16397957 -70279591 - AluJb SINE Alu 0 317 33 2071 93 19 16 chr18 16397966 16398276 -70279272 - AluY SINE Alu 0 311 1 2437 171 115 14 chr18 16398276 16398521 -70279027 - L1MB7 LINE L1 -22 6162 5943 396 0 0 0 chr18 16398521 16398565 -70278983 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 2271 53 4 0 chr18 16398565 16398846 -70278702 - AluY SINE Alu -29 282 1 2437 171 115 14 chr18 16398846 16399156 -70278392 - L1MB7 LINE L1 -240 5944 5550 1277 124 52 71 chr18 16399164 16399431 -70278117 - AluSx SINE Alu -5 307 46 792 128 0 0 chr18 16399432 16399541 -70278007 - AluSq/x SINE Alu -202 110 2 1510 183 48 7 chr18 16399548 16399838 -70277710 - AluJb SINE Alu -10 302 1 2160 93 0 13 chr18 16400303 16400603 -70276945 + AluSc SINE Alu 1 296 -13 431 259 52 46 chr18 16400931 16401105 -70276443 - L1ME LINE L1 -302 5819 5645 23 33 0 0 chr18 16401152 16401182 -70276366 + AT_rich Low_complexity Low_complexity 1 30 0 1059 129 10 81 chr18 16401288 16401499 -70276049 + MER20 DNA MER1_type 22 219 0 1528 188 24 24 chr18 16401529 16401821 -70275727 - AluJo SINE Alu -18 294 3 382 296 103 62 chr18 16402075 16402542 -70275006 - MLT1J LTR MaLR 0 511 26 2394 112 0 0 chr18 16402542 16402854 -70274694 + AluSx SINE Alu 1 312 0 300 347 116 36 chr18 16403482 16403733 -70273815 + L1 LINE L1 4700 4970 -1176 746 191 8 0 chr18 16403862 16403993 -70273555 + FLAM_C SINE Alu 1 132 -1 1797 102 0 31 chr18 16404275 16404390 -70273158 - AluSq SINE Alu -65 248 131 2066 115 27 0 chr18 16404390 16404686 -70272862 - AluSg SINE Alu -6 304 1 2137 110 7 16 chr18 16404689 16404997 -70272551 - AluSx SINE Alu -7 305 1 1797 102 0 31 chr18 16404997 16405133 -70272415 - AluSq SINE Alu -184 129 1 620 286 46 21 chr18 16405429 16405667 -70271881 + MIR SINE MIR 2 245 -17 21 36 0 0 chr18 16405720 16405748 -70271800 + AT_rich Low_complexity Low_complexity 1 28 0 238 246 127 45 chr18 16405960 16406094 -70271454 - L1ME4a LINE L1 -20 6101 5957 21 0 0 0 chr18 16406300 16406321 -70271227 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 16406433 16406461 -70271087 + AT_rich Low_complexity Low_complexity 1 28 0 1581 176 72 32 chr18 16407467 16407813 -70269735 - L1MD2 LINE L1 -1 6358 5999 2268 110 0 3 chr18 16407924 16408225 -70269323 - AluSx SINE Alu -12 300 1 1486 122 0 0 chr18 16409938 16410134 -70267414 - AluSx SINE Alu -116 196 1 386 347 121 43 chr18 16410161 16410614 -70266934 + L2 LINE L2 2033 2449 -865 1959 160 0 3 chr18 16410614 16410926 -70266622 - AluJb SINE Alu -1 311 1 386 347 121 43 chr18 16410926 16411348 -70266200 + L2 LINE L2 2449 2976 -338 1497 158 72 32 chr18 16411562 16411840 -70265708 + AluJo SINE Alu 1 289 -23 180 333 0 0 chr18 16411888 16411936 -70265612 - L2 LINE L2 -9 3263 3216 943 209 19 0 chr18 16412323 16412481 -70265067 + FRAM SINE Alu 1 161 -5 351 0 0 0 chr18 16412772 16412811 -70264737 + (TG)n Simple_repeat Simple_repeat 2 40 0 1620 160 11 14 chr18 16412825 16413106 -70264442 - L1MB1 LINE L1 -44 6124 5845 1022 286 120 39 chr18 16413345 16413488 -70264060 + L1M4 LINE L1 2445 2575 -3571 2916 13 0 0 chr18 16413488 16413805 -70263743 - AluYb8 SINE Alu -1 317 1 1022 286 120 39 chr18 16413805 16413963 -70263585 + L1M4 LINE L1 2575 2719 -3427 2435 85 0 0 chr18 16413963 16414258 -70263290 + AluSp SINE Alu 1 295 -18 1022 286 120 39 chr18 16414258 16414497 -70263051 + L1M4 LINE L1 2719 2937 -3209 2037 131 10 3 chr18 16414497 16414794 -70262754 - AluSx SINE Alu -13 299 1 1022 286 120 39 chr18 16414794 16415265 -70262283 + L1M4 LINE L1 2937 3541 -2605 1099 256 60 73 chr18 16415287 16415415 -70262133 + L1M4 LINE L1 3716 3844 -2302 2273 116 0 0 chr18 16415415 16415726 -70261822 - AluSq SINE Alu -2 311 1 1099 256 60 73 chr18 16415726 16416093 -70261455 + L1M4 LINE L1 3844 4205 -1941 896 233 80 29 chr18 16416173 16416659 -70260889 - MLT1G3 LTR MaLR -8 534 1 27 0 0 0 chr18 16417070 16417097 -70260451 + AT_rich Low_complexity Low_complexity 1 27 0 1884 100 85 21 chr18 16417104 16417385 -70260163 + AluSq SINE Alu 1 299 -14 560 321 93 35 chr18 16417498 16417841 -70259707 + L3 LINE CR1 1190 1552 -25 1384 246 134 40 chr18 16418118 16419278 -70258270 + L1MD3 LINE L1 6544 7995 0 3698 211 111 31 chr18 16419294 16421234 -70256314 + L1MD2 LINE L1 4120 6223 -136 509 271 106 58 chr18 16422295 16422624 -70254924 + L2 LINE L2 2828 3172 -141 2444 78 3 0 chr18 16422797 16423093 -70254455 + AluSp SINE Alu 2 298 -15 186 296 227 11 chr18 16423434 16423522 -70254026 + L2 LINE L2 2499 2605 -709 260 272 32 13 chr18 16425971 16426129 -70251419 + T-rich Low_complexity Low_complexity 5 165 0 229 208 138 39 chr18 16429072 16429202 -70248346 + L1M LINE L1 5276 5418 -762 2173 96 14 0 chr18 16429326 16429618 -70247930 + AluSq SINE Alu 1 296 -17 1258 208 0 71 chr18 16429862 16430117 -70247431 - MER8 DNA MER2_type -1 238 2 252 211 19 0 chr18 16430397 16430449 -70247099 - L2 LINE L2 0 3272 3220 328 269 28 28 chr18 16430547 16430655 -70246893 - MIR SINE MIR -56 206 99 2266 116 0 0 chr18 16430655 16430956 -70246592 - AluSx SINE Alu -11 301 1 2147 93 0 7 chr18 16431911 16432190 -70245358 + AluSx SINE Alu 1 277 -35 258 333 14 0 chr18 16432507 16432576 -70244972 - L2 LINE L2 -1 3271 3202 2028 131 14 0 chr18 16432584 16432875 -70244673 + AluSx SINE Alu 1 295 -17 293 344 66 8 chr18 16433672 16433794 -70243754 + LTR67 LTR ERVL 429 557 0 1984 104 63 0 chr18 16434568 16434837 -70242711 + AluSx SINE Alu 1 286 -26 442 113 0 0 chr18 16434838 16434900 -70242648 + Alu SINE Alu 240 301 -10 456 228 30 74 chr18 16435034 16435236 -70242312 - L1MC5 LINE L1 -614 7347 7155 933 231 24 129 chr18 16435256 16435477 -70242071 - L1MC5 LINE L1 -888 6920 6678 2010 110 41 10 chr18 16435477 16435768 -70241780 - AluSx SINE Alu -12 300 1 933 231 24 129 chr18 16435768 16435804 -70241744 - L1MC5 LINE L1 -1130 6678 6640 2176 119 3 0 chr18 16435804 16436097 -70241451 + AluJb SINE Alu 1 294 -18 933 231 24 129 chr18 16436097 16436440 -70241108 - L1MC5 LINE L1 -1168 6640 6476 508 289 59 71 chr18 16436717 16437292 -70240256 - HAL1b LINE L1 -715 633 66 21 0 0 0 chr18 16437294 16437315 -70240233 + AT_rich Low_complexity Low_complexity 1 21 0 1601 159 42 17 chr18 16437317 16437606 -70239942 + AluJo SINE Alu 1 296 -16 2490 68 0 0 chr18 16437644 16437940 -70239608 - AluY SINE Alu -15 296 1 21 0 0 0 chr18 16438048 16438069 -70239479 + AT_rich Low_complexity Low_complexity 1 21 0 2248 115 0 0 chr18 16438133 16438429 -70239119 + AluSx SINE Alu 1 296 -16 318 308 145 0 chr18 16438431 16438548 -70239000 + L1ME1 LINE L1 5945 6078 -88 2180 106 0 0 chr18 16438600 16438882 -70238666 - AluSx SINE Alu -30 282 1 452 299 111 14 chr18 16439442 16439659 -70237889 + MIR SINE MIR 10 247 -15 195 129 0 0 chr18 16439802 16439833 -70237715 + (CATA)n Simple_repeat Simple_repeat 4 34 0 258 95 0 0 chr18 16439871 16439913 -70237635 + (TTGG)n Simple_repeat Simple_repeat 2 43 0 1623 168 21 21 chr18 16439913 16440199 -70237349 - AluJo SINE Alu -26 286 1 25 31 0 0 chr18 16441209 16441241 -70236307 + AT_rich Low_complexity Low_complexity 1 32 0 2152 125 0 3 chr18 16441322 16441611 -70235937 - AluSx SINE Alu -24 288 1 664 215 34 62 chr18 16441946 16442123 -70235425 + MIR SINE MIR 31 202 -60 245 284 126 38 chr18 16443078 16443261 -70234287 + L2 LINE L2 2665 2863 -451 192 354 61 24 chr18 16443579 16443661 -70233887 - L2 LINE L2 -2973 341 257 497 285 20 7 chr18 16443684 16443835 -70233713 - MIR SINE MIR 0 262 110 855 220 41 65 chr18 16445349 16445640 -70231908 - L1ME1 LINE L1 -20 6146 5863 2335 100 0 0 chr18 16445891 16446191 -70231357 - AluSp SINE Alu -13 300 1 2379 78 0 7 chr18 16446847 16447142 -70230406 - AluSq SINE Alu -19 294 2 751 226 157 0 chr18 16447225 16447442 -70230106 + MIR SINE MIR 12 262 0 490 270 20 7 chr18 16448180 16448328 -70229220 + MIR SINE MIR 113 262 0 1696 172 34 20 chr18 16448683 16448979 -70228569 - AluJb SINE Alu -11 301 2 267 333 35 23 chr18 16449465 16449551 -70227997 - MLT1J LTR MaLR -102 409 325 2176 96 0 0 chr18 16449551 16449862 -70227686 - AluSc SINE Alu 0 319 9 1860 134 33 0 chr18 16449865 16450191 -70227357 - AluSx SINE Alu 0 335 1 267 333 35 23 chr18 16450191 16450272 -70227276 - MLT1J LTR MaLR -187 324 234 343 241 13 13 chr18 16450326 16450405 -70227143 - MLT1L LTR MaLR -388 227 149 453 180 40 40 chr18 16452284 16452384 -70225164 - L1MCa LINE L1 -3948 2478 2379 2191 111 7 0 chr18 16452385 16452683 -70224865 - AluSq SINE Alu -13 300 1 628 249 47 75 chr18 16453784 16453997 -70223551 + MIR SINE MIR 39 245 -17 1006 175 11 11 chr18 16454384 16454561 -70222987 + AluJo SINE Alu 127 303 -9 1484 98 5 0 chr18 16454627 16454820 -70222728 - AluSp SINE Alu -20 293 100 2071 125 4 0 chr18 16454820 16455101 -70222447 - AluSx SINE Alu -29 283 2 180 310 130 0 chr18 16455700 16455800 -70221748 - MIR SINE MIR -30 232 120 2177 83 10 17 chr18 16456218 16456506 -70221042 - AluSc SINE Alu -23 286 1 1109 107 65 0 chr18 16456506 16456675 -70220873 - L1MA6 LINE L1 -1 6299 6120 21 0 0 0 chr18 16456678 16456699 -70220849 + AT_rich Low_complexity Low_complexity 1 21 0 232 59 59 0 chr18 16456747 16456781 -70220767 + L1MA6 LINE L1 6119 6154 -146 1718 176 3 14 chr18 16456807 16457096 -70220452 - AluJb SINE Alu -22 290 5 1379 179 123 3 chr18 16457098 16457406 -70220142 - L1MA6 LINE L1 -173 6127 5783 6384 116 95 90 chr18 16457506 16458811 -70218737 + pTR5 LTR ERV1 1127 2438 0 332 185 143 0 chr18 16458886 16459005 -70218543 + L1MB3 LINE L1 6041 6176 -7 23 0 0 0 chr18 16459175 16459198 -70218350 + AT_rich Low_complexity Low_complexity 1 23 0 1613 212 51 15 chr18 16459301 16459712 -70217836 + L1MC3 LINE L1 7352 7777 -8 246 257 118 15 chr18 16459727 16459863 -70217685 + HAL1b LINE L1 89 238 -1110 284 155 31 93 chr18 16459897 16459994 -70217554 - FRAM SINE Alu -8 158 68 2111 138 0 0 chr18 16460047 16460359 -70217189 - AluSx SINE Alu 0 312 1 481 291 46 52 chr18 16460671 16461066 -70216482 - L1MC5 LINE L1 -384 7577 7235 503 212 53 132 chr18 16461111 16461235 -70216313 - L1MC5 LINE L1 -733 7228 7096 1791 141 7 14 chr18 16461235 16461525 -70216023 + AluJo SINE Alu 1 288 -24 503 212 53 132 chr18 16461525 16461671 -70215877 - L1MC5 LINE L1 -865 7096 6993 2236 89 7 0 chr18 16461671 16461997 -70215551 - AluSx SINE Alu 0 328 1 503 212 53 132 chr18 16461997 16462102 -70215446 - L1MC5 LINE L1 -968 6993 6881 198 0 0 0 chr18 16462505 16462527 -70215021 + (TCCA)n Simple_repeat Simple_repeat 1 22 0 2079 72 65 0 chr18 16462926 16463203 -70214345 + AluSg SINE Alu 1 295 -15 4937 288 73 29 chr18 16463761 16466651 -70210897 - HERVL-F LTR ERVL -2036 3618 443 340 235 8 84 chr18 16466628 16466658 -70210890 - HERVL-F LTR ERVL -5624 140 109 * 1719 169 10 7 chr18 16466658 16466953 -70210595 - AluJb SINE Alu -16 296 1 340 235 8 84 chr18 16466953 16467041 -70210507 - HERVL-F LTR ERVL -5655 109 31 438 191 0 103 chr18 16467075 16467211 -70210337 - MLT2F LTR ERVL -2 661 540 446 248 89 5 chr18 16467305 16467597 -70209951 - MLT2F LTR ERVL -300 363 1 2275 94 0 16 chr18 16468176 16468485 -70209063 + AluSp SINE Alu 1 304 -9 1036 236 26 66 chr18 16469006 16469354 -70208194 - MLT1A2 LTR MaLR -1 373 40 450 272 3 5 chr18 16469567 16469691 -70207857 + L1ME3 LINE L1 6037 6159 -11 2089 111 7 0 chr18 16469701 16470005 -70207543 - AluSp SINE Alu 0 306 1 2009 147 171 8 chr18 16470034 16470402 -70207146 - MSTA LTR MaLR 0 428 1 246 32 0 0 chr18 16470740 16470771 -70206777 + (T)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr18 16470781 16470802 -70206746 + AT_rich Low_complexity Low_complexity 1 21 0 1748 110 4 0 chr18 16470925 16471162 -70206386 - AluSq SINE Alu -75 238 1 704 249 78 87 chr18 16471172 16471529 -70206019 + L1M4 LINE L1 3852 4205 -1941 896 233 80 29 chr18 16471609 16472095 -70205453 - MLT1G3 LTR MaLR -8 534 1 27 0 0 0 chr18 16472506 16472533 -70205015 + AT_rich Low_complexity Low_complexity 1 27 0 1937 99 82 18 chr18 16472540 16472822 -70204726 + AluSq SINE Alu 1 300 -13 560 321 93 35 chr18 16472935 16473278 -70204270 + L3 LINE CR1 1190 1552 -25 1369 247 137 43 chr18 16473557 16474718 -70202830 + L1MD3 LINE L1 6544 7995 0 3698 211 111 31 chr18 16474734 16476674 -70200874 + L1MD2 LINE L1 4120 6223 -136 509 271 106 58 chr18 16477735 16478064 -70199484 + L2 LINE L2 2828 3172 -141 2426 78 3 0 chr18 16478237 16478531 -70199017 + AluSp SINE Alu 2 296 -17 186 296 227 11 chr18 16478872 16478960 -70198588 + L2 LINE L2 2499 2605 -709 260 272 32 13 chr18 16481408 16481566 -70195982 + T-rich Low_complexity Low_complexity 5 165 0 229 208 138 39 chr18 16484509 16484639 -70192909 + L1M LINE L1 5276 5418 -762 2209 110 0 13 chr18 16484763 16485063 -70192485 + AluSx SINE Alu 1 296 -16 2234 94 7 0 chr18 16485806 16486094 -70191454 - AluSx SINE Alu -22 290 1 717 200 0 24 chr18 16486507 16486632 -70190916 + FLAM_C SINE Alu 1 122 -11 198 0 0 0 chr18 16486648 16486670 -70190878 + (A)n Simple_repeat Simple_repeat 1 22 0 44 0 0 0 chr18 16486796 16486840 -70190708 + AT_rich Low_complexity Low_complexity 1 44 0 13745 167 109 20 chr18 16486840 16488481 -70189067 - L1M2 LINE L1 -519 7200 5706 2277 92 31 0 chr18 16488481 16488773 -70188775 + AluSc SINE Alu 1 301 -8 13745 167 109 20 chr18 16488773 16488937 -70188611 - L1M2 LINE L1 -2013 5706 5558 2243 118 0 0 chr18 16488937 16489234 -70188314 - AluSx SINE Alu -15 297 1 13745 167 109 20 chr18 16489234 16490089 -70187459 - L1M2 LINE L1 -2161 5558 4780 1777 140 61 0 chr18 16490089 16490382 -70187166 - AluSx SINE Alu -1 311 1 13745 167 109 20 chr18 16490382 16491911 -70185637 - L1M2 LINE L1 -2939 4780 2638 22 35 0 0 chr18 16492053 16492082 -70185466 + AT_rich Low_complexity Low_complexity 1 29 0 25 65 0 0 chr18 16492174 16492220 -70185328 + AT_rich Low_complexity Low_complexity 1 46 0 26 0 0 0 chr18 16492474 16492500 -70185048 + AT_rich Low_complexity Low_complexity 1 26 0 1794 166 0 3 chr18 16492555 16492844 -70184704 + AluJb SINE Alu 17 304 -8 1852 115 31 4 chr18 16492916 16493177 -70184371 - AluSx SINE Alu -44 268 1 1435 117 41 160 chr18 16494477 16494820 -70182728 + AluYb8 SINE Alu 1 302 -6 2385 101 0 0 chr18 16494965 16495272 -70182276 - AluSg SINE Alu -3 307 1 287 252 138 0 chr18 16495355 16495478 -70182070 - MER112 DNA MER1_type 0 260 121 4643 77 9 40 chr18 16495486 16496161 -70181387 + L1PA13 LINE L1 5490 6143 -20 215 256 26 13 chr18 16496169 16496247 -70181301 + (TATG)n Simple_repeat Simple_repeat 4 82 0 1409 175 36 4 chr18 16496386 16496638 -70180910 + AluJb SINE Alu 4 263 -49 1070 144 24 5 chr18 16497724 16497911 -70179637 - L1ME LINE L1 -469 5700 5515 714 194 21 0 chr18 16497998 16498142 -70179406 - L1MB7 LINE L1 0 6184 6038 568 255 28 28 chr18 16498166 16498378 -70179170 - L1MC4 LINE L1 -369 7673 7462 363 222 0 14 chr18 16498656 16498728 -70178820 - FLAM SINE Alu -10 123 53 2132 107 4 7 chr18 16498814 16499095 -70178453 + AluSx SINE Alu 1 280 -32 2011 141 0 3 chr18 16499486 16499776 -70177772 + AluSx SINE Alu 1 289 -23 2348 102 0 0 chr18 16501518 16501821 -70175727 + AluSx SINE Alu 1 303 -9 2401 91 0 0 chr18 16501828 16502125 -70175423 + AluSc SINE Alu 1 297 -12 373 231 48 19 chr18 16503761 16503865 -70173683 - MIR SINE MIR -6 256 150 1502 137 74 33 chr18 16504185 16504455 -70173093 + AluJo SINE Alu 2 282 -30 216 67 0 0 chr18 16504469 16504499 -70173049 + (TC)n Simple_repeat Simple_repeat 1 30 0 294 143 0 0 chr18 16504502 16504551 -70172997 + (CATA)n Simple_repeat Simple_repeat 2 50 0 40 59 0 0 chr18 16504556 16504624 -70172924 + AT_rich Low_complexity Low_complexity 1 68 0 933 119 7 21 chr18 16505835 16505978 -70171570 + FLAM_C SINE Alu 1 141 -2 557 219 78 1 chr18 16506957 16507108 -70170440 - MIR SINE MIR -56 152 32 1888 89 8 12 chr18 16509032 16509280 -70168268 + AluSq SINE Alu 46 292 -21 2148 105 0 0 chr18 16509528 16509813 -70167735 + AluSc SINE Alu 1 285 -24 303 312 251 10 chr18 16510045 16510654 -70166894 + L2 LINE L2 1770 2525 -789 1289 115 71 53 chr18 16510697 16510923 -70166625 - MER30 DNA MER1_type 0 230 1 275 422 20 7 chr18 16511173 16511320 -70166228 - L2 LINE L2 -2 3270 3122 1196 224 80 42 chr18 16512020 16512445 -70165103 - MLT2B2 LTR ERVL 0 515 75 332 194 0 0 chr18 16512541 16512608 -70164940 - MLT2B2 LTR ERVL -487 67 1 2230 116 0 3 chr18 16513059 16513360 -70164188 + AluSq SINE Alu 1 300 -13 274 206 0 103 chr18 16513466 16513534 -70164014 - MER2 DNA MER2_type 0 345 285 2267 77 0 74 chr18 16513586 16513923 -70163625 + AluSx SINE Alu 1 312 0 180 0 0 0 chr18 16513931 16513951 -70163597 + (G)n Simple_repeat Simple_repeat 1 20 0 953 95 32 0 chr18 16514051 16514177 -70163371 - AluSp SINE Alu -183 130 1 338 254 140 57 chr18 16514962 16515080 -70162468 + HAL1 LINE L1 812 919 -1588 2562 197 83 40 chr18 16515080 16515168 -70162380 - MER82 DNA MER2_type -1 652 569 2156 126 7 0 chr18 16515168 16515477 -70162071 - AluSx SINE Alu -1 311 1 2562 197 83 40 chr18 16515477 16516013 -70161535 - MER82 DNA MER2_type -84 569 1 338 254 140 57 chr18 16516013 16516402 -70161146 + HAL1 LINE L1 919 1361 -1146 1421 174 57 23 chr18 16516407 16516706 -70160842 + AluJb SINE Alu 1 309 -3 2227 110 3 0 chr18 16516717 16517016 -70160532 + AluSx SINE Alu 1 300 -12 31 26 0 0 chr18 16517076 16517114 -70160434 + AT_rich Low_complexity Low_complexity 1 38 0 1754 162 13 26 chr18 16517519 16517827 -70159721 - AluJo SINE Alu -3 309 6 1263 125 0 24 chr18 16518547 16518783 -70158765 + AluSq SINE Alu 83 313 0 1373 216 71 51 chr18 16518902 16519351 -70158197 + MLT1C LTR MaLR 10 467 0 10866 179 68 37 chr18 16519561 16521773 -70155775 + L1MCa LINE L1 5 2145 -4281 1784 170 7 0 chr18 16521773 16522080 -70155468 + AluJo SINE Alu 1 309 0 10866 179 68 37 chr18 16522080 16522218 -70155330 + L1MCa LINE L1 2145 2277 -4149 2177 120 0 7 chr18 16522218 16522527 -70155021 + AluSx SINE Alu 1 307 -5 2229 103 0 0 chr18 16522529 16522838 -70154710 + AluSc SINE Alu 1 309 0 10866 179 68 37 chr18 16522838 16523342 -70154206 + L1MCa LINE L1 2277 2974 -3452 822 261 43 11 chr18 16523358 16523638 -70153910 + L1MCa LINE L1 3722 4010 -2416 15245 111 18 16 chr18 16523803 16526107 -70151441 - L1P LINE L1 -3825 2321 12 8996 86 27 9 chr18 16526112 16526168 -70151380 - L1P3 LINE L1 -671 5798 5744 2105 100 0 45 chr18 16526168 16526477 -70151071 - AluSc SINE Alu -14 295 1 8996 86 27 9 chr18 16526477 16527798 -70149750 - L1P3 LINE L1 -725 5744 4402 1455 122 14 0 chr18 16527786 16527999 -70149549 - L1P3 LINE L1 -6245 216 1 * 1495 151 70 8 chr18 16529525 16529784 -70147764 + AluJo SINE Alu 1 275 -37 189 94 0 0 chr18 16529790 16529822 -70147726 + (TAAA)n Simple_repeat Simple_repeat 4 35 0 21 0 0 0 chr18 16530774 16530795 -70146753 + AT_rich Low_complexity Low_complexity 1 21 0 232 265 200 12 chr18 16531023 16531133 -70146415 + MIR SINE MIR 39 167 -68 24 67 0 0 chr18 16531447 16531492 -70146056 + AT_rich Low_complexity Low_complexity 1 45 0 497 232 191 29 chr18 16531511 16531851 -70145697 + L1ME4a LINE L1 5678 6072 -49 184 221 151 35 chr18 16532321 16532407 -70145141 - L2 LINE L2 -40 3232 3137 260 231 46 108 chr18 16532457 16532587 -70144961 - L2 LINE L2 -216 3056 2935 546 222 144 6 chr18 16533207 16533374 -70144174 + MIR SINE MIR 67 256 -6 529 241 133 6 chr18 16533403 16533569 -70143979 - MIR SINE MIR -74 188 2 1225 236 50 105 chr18 16534013 16534225 -70143323 - L1MC4 LINE L1 -2 8040 7818 2201 104 7 16 chr18 16534225 16534532 -70143016 + AluY SINE Alu 1 304 -7 1225 236 50 105 chr18 16534532 16534815 -70142733 - L1MC4 LINE L1 -224 7818 7572 2408 227 197 11 chr18 16535319 16536263 -70141285 - L1MC4 LINE L1 -283 7576 6442 1349 151 0 35 chr18 16536421 16536653 -70140895 - AluJo SINE Alu -88 224 1 243 0 0 0 chr18 16538966 16538993 -70138555 + (T)n Simple_repeat Simple_repeat 1 27 0 1053 9 0 0 chr18 16539001 16539114 -70138434 - SVA Other Other -6 1380 1268 2135 67 7 7 chr18 16539114 16539383 -70138165 - LTR5 LTR ERVK -639 330 62 5095 61 12 6 chr18 16539484 16540137 -70137411 - SVA Other Other -725 661 5 23 33 0 0 chr18 16540367 16540397 -70137151 + AT_rich Low_complexity Low_complexity 1 30 0 1192 187 7 9 chr18 16540612 16540902 -70136646 - MER2 DNA MER2_type -3 342 2 210 217 120 87 chr18 16541749 16541841 -70135707 + MIR SINE MIR 49 143 -119 1366 175 49 140 chr18 16541901 16542330 -70135218 + MER47B DNA MER2_type 3 392 -26 1808 153 7 14 chr18 16544618 16544912 -70132636 - AluJb SINE Alu -20 292 1 957 119 0 14 chr18 16545419 16545562 -70131986 + FRAM SINE Alu 32 172 -4 939 186 60 64 chr18 16546794 16547095 -70130453 + L1 LINE L1 4487 4761 -1385 309 310 107 65 chr18 16547208 16547424 -70130124 + L1MB5 LINE L1 1018 1242 -5607 253 155 29 19 chr18 16547432 16547535 -70130013 + (CCA)n Simple_repeat Simple_repeat 3 106 0 180 0 0 0 chr18 16547671 16547691 -70129857 + (CCA)n Simple_repeat Simple_repeat 3 22 0 226 316 209 13 chr18 16547968 16548126 -70129422 - MIR SINE MIR -21 241 53 660 231 8 0 chr18 16548138 16548259 -70129289 + FLAM_A SINE Alu 1 122 -20 21 0 0 0 chr18 16548259 16548280 -70129268 + AT_rich Low_complexity Low_complexity 1 21 0 3187 156 10 8 chr18 16548821 16549567 -70127981 + L1PA16 LINE L1 4740 5484 -682 532 106 0 0 chr18 16549568 16549634 -70127914 + AluJb SINE Alu 86 151 -161 1103 166 0 6 chr18 16549635 16549810 -70127738 + AluSc SINE Alu 119 292 -17 4230 136 50 11 chr18 16549811 16550475 -70127073 + L1PA16 LINE L1 5476 6165 -1 264 252 135 14 chr18 16550529 16550751 -70126797 + L1MB5 LINE L1 3723 3971 -2877 1455 217 42 28 chr18 16551112 16551472 -70126076 + L1MB5 LINE L1 5303 5667 -1181 1898 203 40 88 chr18 16551472 16552043 -70125505 - MLT2B3 LTR ERVL 0 554 11 2270 98 0 3 chr18 16552050 16552347 -70125201 - AluY SINE Alu -15 296 1 3696 181 33 15 chr18 16552373 16553382 -70124166 + L1MB5 LINE L1 5660 6687 -189 1690 243 65 22 chr18 16555264 16555798 -70121750 - L1ME2 LINE L1 -84 6080 5524 195 275 92 18 chr18 16556225 16556334 -70121214 - L2 LINE L2 -203 3069 2953 211 259 0 0 chr18 16556647 16556705 -70120843 - L2 LINE L2 -925 2389 2332 2479 61 7 0 chr18 16557538 16557831 -70119717 - AluY SINE Alu -16 295 1 1760 166 3 11 chr18 16557863 16558147 -70119401 + AluJb SINE Alu 1 282 -30 22 35 0 0 chr18 16558223 16558252 -70119296 + AT_rich Low_complexity Low_complexity 1 29 0 288 219 176 42 chr18 16559591 16559710 -70117838 + MIR SINE MIR 105 239 -23 189 0 0 0 chr18 16559721 16559742 -70117806 + (CAT)n Simple_repeat Simple_repeat 1 21 0 2120 110 14 0 chr18 16560383 16560687 -70116861 + AluSq SINE Alu 1 308 0 2119 115 3 14 chr18 16562929 16563064 -70114484 + AluSx SINE Alu 1 136 -176 2352 86 0 0 chr18 16563064 16563354 -70114194 + AluSc SINE Alu 1 290 -19 2119 115 3 14 chr18 16563354 16563514 -70114034 + AluSx SINE Alu 136 293 -19 252 0 0 0 chr18 16563755 16563783 -70113765 + (TG)n Simple_repeat Simple_repeat 2 29 0 2257 123 0 0 chr18 16564800 16565093 -70112455 + AluSq SINE Alu 1 293 -20 2021 136 10 0 chr18 16567062 16567357 -70110191 - AluSx SINE Alu -14 298 1 239 327 69 0 chr18 16567628 16567729 -70109819 + L2 LINE L2 2232 2339 -975 208 346 29 19 chr18 16568586 16568690 -70108858 - MIR SINE MIR 0 262 158 180 0 0 0 chr18 16568796 16568816 -70108732 + (CTGGGG)n Simple_repeat Simple_repeat 3 22 0 338 239 25 4 chr18 16568847 16568942 -70108606 - MIR SINE MIR -76 132 38 1003 262 168 20 chr18 16570081 16570592 -70106956 + MLT1E LTR MaLR 7 593 0 2111 94 30 30 chr18 16570778 16571075 -70106473 - AluSq SINE Alu -16 297 1 2128 106 0 17 chr18 16573103 16573404 -70104144 + AluY SINE Alu 14 309 -2 2064 133 3 3 chr18 16573488 16573788 -70103760 - AluJo SINE Alu -4 308 9 2416 98 299 117 chr18 16574887 16575496 -70102052 - pTR5 LTR ERV1 0 2438 1719 291 28 0 0 chr18 16575633 16575669 -70101879 + (A)n Simple_repeat Simple_repeat 1 36 0 423 0 0 0 chr18 16575734 16575781 -70101767 + (CATA)n Simple_repeat Simple_repeat 2 48 0 223 300 91 18 chr18 16575854 16576074 -70101474 - L2 LINE L2 -167 3146 2911 2236 99 0 0 chr18 16576233 16576556 -70100992 - AluSx SINE Alu 0 323 1 469 230 177 0 chr18 16576574 16576711 -70100837 + FLAM_C SINE Alu 1 157 0 347 194 51 31 chr18 16578936 16579034 -70098514 + MIR SINE MIR 101 200 -62 3488 122 53 32 chr18 16579047 16579668 -70097880 - MER51A LTR ERV1 0 634 1 314 236 93 93 chr18 16580173 16580357 -70097191 + L1MC5 LINE L1 7502 7691 -270 1243 149 178 4 chr18 16580357 16580632 -70096916 + AluJo SINE Alu 1 317 0 314 236 93 93 chr18 16580632 16580766 -70096782 + L1MC5 LINE L1 7690 7823 -138 24 0 0 0 chr18 16580777 16580801 -70096747 + AT_rich Low_complexity Low_complexity 1 24 0 2412 73 0 10 chr18 16581799 16582100 -70095448 - AluY SINE Alu -13 298 1 1732 174 13 13 chr18 16583176 16583475 -70094073 + AluJb SINE Alu 1 299 -13 1194 181 34 38 chr18 16583535 16583568 -70093980 - MLT1E3 LTR MaLR 0 624 592 3242 136 4 2 chr18 16583568 16584062 -70093486 - LOR1a LTR ERV1 -2 495 1 1194 181 34 38 chr18 16584062 16584293 -70093255 - MLT1E3 LTR MaLR -32 592 361 575 256 35 69 chr18 16584349 16584552 -70092996 + MER8 DNA MER2_type 11 206 -33 329 190 64 5 chr18 16584606 16584720 -70092828 - MLT1E3 LTR MaLR -385 269 90 4240 193 47 29 chr18 16584728 16585598 -70091950 + L1MB2 LINE L1 4657 5580 -591 2093 155 36 65 chr18 16585598 16586043 -70091505 - MSTB1 LTR MaLR 0 432 1 4240 193 47 29 chr18 16586043 16586645 -70090903 + L1MB2 LINE L1 5580 6170 -1 339 260 13 0 chr18 16586667 16586744 -70090804 + L2 LINE L2 3236 3313 0 21 36 0 0 chr18 16586814 16586842 -70090706 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr18 16586981 16587021 -70090527 + AT_rich Low_complexity Low_complexity 1 40 0 325 191 0 8 chr18 16587042 16587120 -70090428 - L1MB2 LINE L1 -258 5913 5852 466 132 0 0 chr18 16587121 16587189 -70090359 - L1MB2 LINE L1 -547 5624 5557 1229 181 38 62 chr18 16587189 16587477 -70090071 + MSTB1 LTR MaLR 1 281 -151 1829 229 24 4 chr18 16587496 16587999 -70089549 - L1M4c LINE L1 -3038 2932 2420 * 3080 140 34 34 chr18 16587986 16588571 -70088977 - L1MA4 LINE L1 -400 6082 5498 6000 119 44 0 chr18 16588576 16589532 -70088016 - L1PA13 LINE L1 -11 6152 5189 1893 140 46 3 chr18 16589532 16589881 -70087667 - L1MA4 LINE L1 -1414 4914 4551 1827 121 15 50 chr18 16589885 16590223 -70087325 - THE1C LTR MaLR -49 326 1 21 36 0 0 chr18 16590951 16590979 -70086569 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr18 16591256 16591278 -70086270 + AT_rich Low_complexity Low_complexity 1 22 0 602 175 32 2 chr18 16592806 16592947 -70084601 + L1ME LINE L1 5622 5730 -434 10371 190 36 24 chr18 16592960 16593242 -70084306 - L1MA4 LINE L1 -1766 4562 4285 2035 157 0 0 chr18 16593242 16593535 -70084013 + AluSx SINE Alu 1 293 -19 10371 190 36 24 chr18 16593535 16594131 -70083417 - L1MA4 LINE L1 -2043 4285 3698 2198 78 0 41 chr18 16594131 16594448 -70083100 - AluY SINE Alu 0 305 1 10371 190 36 24 chr18 16594448 16597145 -70080403 - L1MA4 LINE L1 -2630 3698 910 1251 217 91 31 chr18 16597145 16597431 -70080117 + AluJo SINE Alu 1 303 -9 10371 190 36 24 chr18 16597431 16598349 -70079199 - L1MA4 LINE L1 -5418 910 4 2322 234 31 81 chr18 16598345 16598914 -70078634 - L1M4c LINE L1 -4516 1385 858 * 1967 162 0 6 chr18 16598914 16599228 -70078320 - AluJb SINE Alu 0 312 1 2322 234 31 81 chr18 16599228 16599678 -70077870 - L1M4c LINE L1 -5043 858 387 436 333 69 43 chr18 16599833 16600226 -70077322 - L1M4c LINE L1 -5487 404 2 337 108 12 145 chr18 16600711 16600751 -70076797 - L1MB3 LINE L1 -11 6172 6147 2511 63 3 0 chr18 16600751 16601052 -70076496 - AluY SINE Alu -9 302 1 337 108 12 145 chr18 16601052 16601094 -70076454 - L1MB3 LINE L1 -36 6147 6101 271 278 62 0 chr18 16601305 16601402 -70076146 - MIR SINE MIR -62 146 44 382 342 0 0 chr18 16602549 16602666 -70074882 + MIR3 SINE MIR 44 160 -48 742 98 0 0 chr18 16603014 16603116 -70074432 - FRAM SINE Alu -40 136 35 359 264 72 61 chr18 16603562 16603849 -70073699 - MER31-int LTR ERV1 -1139 5493 3542 15606 172 37 16 chr18 16605221 16608590 -70068958 + L1PB1 LINE L1 3 3298 -3569 1982 102 4 8 chr18 16608590 16608906 -70068642 + AluSg1 SINE Alu 14 328 0 15606 172 37 16 chr18 16608906 16611384 -70066164 + L1PB1 LINE L1 3298 6175 -692 1758 150 0 0 chr18 16611384 16611651 -70065897 + AluSx SINE Alu 36 302 -10 15606 172 37 16 chr18 16611651 16612359 -70065189 + L1PB1 LINE L1 6175 6866 -1 25 65 0 0 chr18 16612359 16612405 -70065143 + AT_rich Low_complexity Low_complexity 1 46 0 1944 138 7 3 chr18 16612439 16612746 -70064802 - AluSq SINE Alu 0 308 1 839 167 0 0 chr18 16613137 16613269 -70064279 + FLAM_C SINE Alu 1 132 -1 394 194 32 0 chr18 16614022 16614115 -70063433 - LTR37B LTR ERV1 -11 457 362 1064 232 95 77 chr18 16614320 16614773 -70062775 + MER87 LTR ERV1 80 540 -1 400 265 111 47 chr18 16615432 16615775 -70061773 + L1ME LINE L1 43 407 -5663 1441 206 92 92 chr18 16615926 16616383 -70061165 + MER101 LTR ERV1 11 467 -7 882 232 74 14 chr18 16616479 16616763 -70060785 - L1MA9 LINE L1 -71 6241 5941 1671 156 34 0 chr18 16617785 16618048 -70059500 - AluJb SINE Alu -38 274 3 692 172 0 22 chr18 16618750 16618786 -70058762 - L1MA10 LINE L1 -1 6333 6298 2331 171 20 34 chr18 16618786 16619226 -70058322 + Tigger2a DNA MER2_type 1 434 0 692 172 0 22 chr18 16619226 16619323 -70058225 - L1MA10 LINE L1 -36 6298 6203 3443 188 49 26 chr18 16619389 16620122 -70057426 + L1MB8 LINE L1 5423 6172 -6 397 230 0 96 chr18 16620339 16620381 -70057167 - L1MA10 LINE L1 -11 6323 6279 2336 99 0 0 chr18 16620381 16620675 -70056873 - AluSg SINE Alu -16 294 1 397 230 0 96 chr18 16620675 16620767 -70056781 - L1MA10 LINE L1 -55 6279 6202 2984 106 25 5 chr18 16620774 16621208 -70056340 + MER4C LTR ERV1 23 465 0 1370 225 70 54 chr18 16621211 16621581 -70055967 - L1ME1 LINE L1 -123 6043 5661 3553 183 54 16 chr18 16621581 16622287 -70055261 - MER44D DNA MER2_type 0 605 1 1370 225 70 54 chr18 16622287 16622418 -70055130 - L1ME1 LINE L1 -505 5661 5534 2289 96 0 7 chr18 16623004 16623305 -70054243 + AluSx SINE Alu 1 299 -13 634 232 63 11 chr18 16623492 16623682 -70053866 - L1MD2 LINE L1 -1 6358 6159 253 304 13 0 chr18 16623682 16623761 -70053787 + MER94 DNA DNA 26 105 -29 371 310 52 6 chr18 16624059 16624233 -70053315 + MIR SINE MIR 35 216 -46 205 146 0 73 chr18 16625651 16625706 -70051842 + MIR SINE MIR 97 147 -61 269 280 212 26 chr18 16628185 16628563 -70048985 + L1MC4a LINE L1 5869 6316 -1492 21 57 0 0 chr18 16629253 16629288 -70048260 + AT_rich Low_complexity Low_complexity 1 35 0 2375 110 0 0 chr18 16629540 16629849 -70047699 - AluSc SINE Alu 0 309 1 312 277 62 0 chr18 16629950 16630062 -70047486 + L1MC/D LINE L1 4959 5077 -1069 678 196 7 7 chr18 16630121 16630264 -70047284 - L1MB3 LINE L1 -1 6182 6040 315 235 142 29 chr18 16630350 16630553 -70046995 + L1MC/D LINE L1 5255 5482 -688 1007 173 0 0 chr18 16630762 16630918 -70046630 + AluJb SINE Alu 136 291 -21 272 202 186 24 chr18 16630951 16631009 -70046539 + L1MC/D LINE L1 5614 5661 -2147 381 75 0 0 chr18 16631009 16631062 -70046486 + (TG)n Simple_repeat Simple_repeat 1 53 0 272 202 186 24 chr18 16631062 16631127 -70046421 + L1MC/D LINE L1 5661 5757 -2051 356 202 20 20 chr18 16631927 16632042 -70045506 + MLT1H LTR MaLR 11 127 -422 233 250 36 12 chr18 16632291 16632375 -70045173 + MLT1H1 LTR MaLR 413 498 -57 27 49 0 0 chr18 16632375 16632416 -70045132 + AT_rich Low_complexity Low_complexity 1 41 0 1050 154 0 6 chr18 16632546 16632715 -70044833 - AluSq SINE Alu -7 306 139 1750 117 34 0 chr18 16632715 16632954 -70044594 - AluSq SINE Alu -66 247 1 767 258 85 16 chr18 16633837 16634198 -70043350 + L1ME3A LINE L1 5582 5968 -202 1302 234 112 18 chr18 16634248 16634633 -70042915 + LTR40b LTR ERVL 1 421 -41 1857 153 0 7 chr18 16634805 16635087 -70042461 + AluJb SINE Alu 1 280 -32 2552 27 17 3 chr18 16635631 16635926 -70041622 - AluY SINE Alu -12 299 1 4784 175 26 18 chr18 16636219 16637648 -70039900 - L1MB3 LINE L1 -2 6181 4733 22 0 0 0 chr18 16637668 16637690 -70039858 + AT_rich Low_complexity Low_complexity 1 22 0 390 304 24 0 chr18 16637740 16637865 -70039683 - MER63 DNA MER1_type -307 755 2 472 271 25 38 chr18 16638138 16638372 -70039176 - HAL1b LINE L1 -916 432 261 2270 110 10 0 chr18 16638496 16638788 -70038760 - AluSx SINE Alu -17 295 1 1768 184 31 3 chr18 16638820 16639146 -70038402 - L1MB5 LINE L1 0 6174 5840 2160 209 102 89 chr18 16639147 16639296 -70038252 - L1M4c LINE L1 -4606 2353 2208 180 0 0 0 chr18 16639296 16639316 -70038232 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 2160 209 102 89 chr18 16639316 16640038 -70037510 - L1M4c LINE L1 -4751 2208 1498 1400 214 33 10 chr18 16640038 16640337 -70037211 - AluJo SINE Alu -6 306 1 2160 209 102 89 chr18 16640337 16640651 -70036897 - L1M4c LINE L1 -5461 1498 1190 1273 135 16 10 chr18 16640724 16640916 -70036632 - AluSc SINE Alu -8 301 109 2262 172 57 63 chr18 16641028 16641535 -70036013 - MLT1D LTR MaLR -1 504 1 456 316 22 0 chr18 16641541 16641677 -70035871 + L1ME3 LINE L1 5602 5740 -2068 834 282 29 0 chr18 16641682 16641927 -70035621 + MIR SINE MIR 1 252 -10 2254 121 0 0 chr18 16642042 16642340 -70035208 - AluSq SINE Alu -15 298 1 296 231 55 0 chr18 16642340 16642431 -70035117 + L1ME3 LINE L1 5858 5953 -209 554 284 173 22 chr18 16642944 16643531 -70034017 + L2 LINE L2 2615 3304 -9 2146 102 0 53 chr18 16643851 16644173 -70033375 - AluSx SINE Alu -7 305 1 580 258 53 16 chr18 16644655 16644845 -70032703 - L1MC2 LINE L1 -4 6340 6144 1123 178 10 10 chr18 16644864 16645066 -70032482 + AluJo SINE Alu 25 226 -86 2907 141 2 5 chr18 16645066 16645555 -70031993 - L1MC1 LINE L1 -215 6118 5600 347 308 128 14 chr18 16645830 16646041 -70031507 - L1MC4 LINE L1 -1036 7006 6772 21 0 0 0 chr18 16646270 16646291 -70031257 + AT_rich Low_complexity Low_complexity 1 21 0 505 298 60 35 chr18 16647359 16647678 -70029870 + MLT1K LTR MaLR 253 579 -9 263 292 208 0 chr18 16647817 16647985 -70029563 + L3 LINE CR1 1056 1258 -319 397 220 101 0 chr18 16648691 16648800 -70028748 + L2 LINE L2 3192 3311 -2 600 167 20 0 chr18 16648851 16648953 -70028595 + MLT1A1 LTR MaLR 262 365 0 4193 121 10 0 chr18 16649039 16649651 -70027897 - L1PA13 LINE L1 -11 6152 5535 7442 46 1 4 chr18 16649901 16651611 -70025937 + L1PA5 LINE L1 4411 6154 0 896 98 0 0 chr18 16652083 16652205 -70025343 - AluSg SINE Alu -188 122 1 5652 155 29 23 chr18 16652568 16653945 -70023603 - L1MA5A LINE L1 -1 6296 4907 466 49 0 0 chr18 16653945 16654006 -70023542 - L1PA11 LINE L1 -17 6157 6097 5652 155 29 23 chr18 16654006 16654319 -70023229 - L1MA5A LINE L1 -1390 4907 4597 7075 169 31 10 chr18 16654327 16655804 -70021744 + L1MA5A LINE L1 3120 4627 -1519 2295 84 0 14 chr18 16656072 16656382 -70021166 - AluSq SINE Alu 0 306 1 203 163 47 0 chr18 16658290 16658333 -70019215 - L2 LINE L2 -557 2757 2713 1697 187 0 13 chr18 16658636 16658941 -70018607 + AluJb SINE Alu 3 303 -9 182 241 130 0 chr18 16659086 16659140 -70018408 - L2 LINE L2 -9 3263 3203 209 178 254 17 chr18 16659322 16659440 -70018108 - L2 LINE L2 -313 3000 2855 275 229 16 0 chr18 16660398 16660459 -70017089 + MER5A DNA MER1_type 128 189 0 1180 191 9 5 chr18 16661596 16661811 -70015737 + MER20 DNA MER1_type 1 216 -3 771 182 142 0 chr18 16661877 16662025 -70015523 + FRAM SINE Alu 1 169 -7 216 97 0 0 chr18 16663124 16663155 -70014393 + (TCCCC)n Simple_repeat Simple_repeat 2 32 0 1709 167 19 7 chr18 16663159 16663429 -70014119 - AluJo SINE Alu -39 273 1 210 37 0 0 chr18 16663635 16663662 -70013886 + (TCCC)n Simple_repeat Simple_repeat 2 28 0 218 336 160 19 chr18 16664756 16665024 -70012524 - L3 LINE CR1 -126 1451 1146 183 214 36 71 chr18 16665368 16665424 -70012124 + L2 LINE L2 3210 3263 -9 602 244 28 69 chr18 16666569 16666786 -70010762 + MIR SINE MIR 32 239 -23 354 338 73 9 chr18 16668015 16668234 -70009314 + L2 LINE L2 2432 2664 -650 417 278 30 38 chr18 16668999 16669132 -70008416 - MER5A DNA MER1_type -3 186 55 579 163 16 65 chr18 16670900 16671023 -70006525 - FLAM_A SINE Alu -3 139 23 1456 205 33 16 chr18 16673100 16673407 -70004141 + AluJo SINE Alu 1 312 0 222 321 18 9 chr18 16673877 16673989 -70003559 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 207 0 0 0 chr18 16674915 16674938 -70002610 + (T)n Simple_repeat Simple_repeat 1 23 0 7250 55 2 0 chr18 16675045 16676083 -70001465 + L1PA5 LINE L1 5115 6154 0 852 234 75 19 chr18 16676427 16676735 -70000813 - L1ME3 LINE L1 -13 6149 5825 2196 62 16 29 chr18 16676752 16677058 -70000490 - L1PA10 LINE L1 -4 6164 5863 787 94 16 0 chr18 16677058 16677186 -70000362 + L1P LINE L1 5285 5414 -760 546 262 29 32 chr18 16677194 16677473 -70000075 - L1ME3 LINE L1 -344 5818 5451 405 254 33 8 chr18 16678078 16678200 -69999348 - MLT2E LTR ERVL -501 127 3 196 220 85 17 chr18 16678982 16679041 -69998507 - MIR SINE MIR -82 180 118 247 267 59 59 chr18 16679608 16679709 -69997839 - L2 LINE L2 -3 3310 3210 2481 53 0 0 chr18 16679923 16680241 -69997307 + AluY SINE Alu 1 318 0 620 204 166 6 chr18 16680900 16681057 -69996491 + MIR SINE MIR 81 262 0 335 219 89 41 chr18 16682027 16682173 -69995375 + L1ME4a LINE L1 5965 6117 -4 2252 97 3 23 chr18 16682476 16682784 -69994764 - AluSp SINE Alu -11 302 1 466 297 13 32 chr18 16683918 16684073 -69993475 - MIR SINE MIR -38 224 73 2379 84 7 3 chr18 16685073 16685372 -69992176 + AluSx SINE Alu 1 300 -12 357 252 0 0 chr18 16686723 16686826 -69990722 + (TG)n Simple_repeat Simple_repeat 1 103 0 310 339 77 8 chr18 16686838 16686968 -69990580 + L2 LINE L2 3116 3254 -18 2343 103 10 0 chr18 16687084 16687394 -69990154 - AluSp SINE Alu 0 313 1 21 0 0 0 chr18 16687761 16687782 -69989766 + AT_rich Low_complexity Low_complexity 1 21 0 221 259 0 0 chr18 16688079 16688133 -69989415 + T-rich Low_complexity Low_complexity 5 58 0 279 208 39 26 chr18 16688190 16688267 -69989281 - L2 LINE L2 -7 3306 3229 272 290 0 0 chr18 16689971 16690033 -69987515 + polypyrimidine Low_complexity Low_complexity 3 64 0 186 133 0 0 chr18 16690992 16691022 -69986526 + (T)n Simple_repeat Simple_repeat 1 30 0 2413 89 0 3 chr18 16692228 16692521 -69985027 - AluSp SINE Alu -16 297 6 211 202 246 70 chr18 16693015 16693129 -69984419 - L2 LINE L2 0 3272 3139 546 286 110 73 chr18 16693294 16693759 -69983789 - L2 LINE L2 -611 2703 2222 1718 155 30 30 chr18 16698094 16698391 -69979157 + AluJo SINE Alu 1 297 -15 2479 80 10 0 chr18 16699503 16699802 -69977746 + AluSc SINE Alu 1 302 -7 27 0 0 0 chr18 16701070 16701097 -69976451 + AT_rich Low_complexity Low_complexity 1 27 0 732 124 0 0 chr18 16701097 16701210 -69976338 - L1PB4 LINE L1 -13 6143 6031 461 259 162 41 chr18 16701846 16702043 -69975505 - MIR SINE MIR -21 241 21 249 108 0 0 chr18 16702588 16702625 -69974923 + (T)n Simple_repeat Simple_repeat 1 37 0 344 292 134 12 chr18 16702725 16702896 -69974652 - L1ME LINE L1 -474 5647 5456 468 35 0 0 chr18 16703087 16703145 -69974403 + (TAAAA)n Simple_repeat Simple_repeat 4 61 0 2276 142 19 16 chr18 16703931 16704305 -69973243 - THE1C LTR MaLR 0 375 1 370 127 2 60 chr18 16705012 16705087 -69972461 + AluJo SINE Alu 74 135 -167 389 292 89 18 chr18 16705659 16705827 -69971721 + MIR SINE MIR 69 248 -14 1496 217 28 25 chr18 16706339 16706703 -69970845 + MLT1A1 LTR MaLR 1 365 0 309 267 118 25 chr18 16706812 16706973 -69970575 + Charlie7 DNA MER1_type 2435 2610 -2 200 278 35 70 chr18 16708336 16708451 -69969097 + MIR SINE MIR 18 128 -80 858 233 0 0 chr18 16708600 16708772 -69968776 + FAM SINE Alu 1 172 -3 1433 106 23 0 chr18 16709269 16709487 -69968061 + L1MA1 LINE L1 6080 6302 0 262 357 54 0 chr18 16709489 16709601 -69967947 - L2 LINE L2 -12 3260 3143 2004 157 0 3 chr18 16709721 16710026 -69967522 - AluSg SINE Alu -6 304 1 1830 254 92 25 chr18 16710044 16710598 -69966950 - MLT1E LTR MaLR -2 591 1 180 118 59 0 chr18 16711715 16711749 -69965799 - L3 LINE CR1 -290 1287 1252 302 219 32 148 chr18 16712426 16712581 -69964967 + L2 LINE L2 3172 3308 -5 425 228 94 40 chr18 16713949 16714098 -69963450 + MIR SINE MIR 28 184 -78 1759 152 0 8 chr18 16714849 16715113 -69962435 + AluJo SINE Alu 24 285 -27 198 0 0 0 chr18 16715133 16715155 -69962393 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 2703 80 14 3 chr18 16715594 16715945 -69961603 - THE1A LTR MaLR 0 355 1 11934 93 19 0 chr18 16715945 16717496 -69960052 - THE1A-int LTR MaLR 0 1580 1 2500 85 38 0 chr18 16717496 16717838 -69959710 - THE1A LTR MaLR 0 355 1 385 178 14 0 chr18 16719607 16719680 -69957868 + L1M3 LINE L1 5508 5581 -602 1974 142 17 3 chr18 16719680 16720026 -69957522 - L1MB3 LINE L1 -42 6141 5791 1494 158 4 4 chr18 16720092 16720326 -69957222 - AluJo SINE Alu -8 304 71 1047 51 22 14 chr18 16727758 16727896 -69949652 + MER85 DNA T2_type 1 139 0 194 307 107 36 chr18 16728217 16728357 -69949191 - MIR3 SINE MIR -21 187 38 248 280 63 69 chr18 16729621 16729796 -69947752 - MIR3 SINE MIR -7 201 28 1063 269 3 3 chr18 16730022 16730305 -69947243 - MLT1B LTR MaLR 0 390 108 578 139 0 0 chr18 16730323 16730402 -69947146 - AluJo SINE Alu -232 80 2 25 51 0 0 chr18 16730413 16730452 -69947096 + AT_rich Low_complexity Low_complexity 1 39 0 291 273 32 29 chr18 16730604 16730737 -69946811 + MIR SINE MIR 17 151 -57 1875 148 7 20 chr18 16731249 16731547 -69946001 + AluJo SINE Alu 7 300 -12 233 240 47 6 chr18 16732269 16732440 -69945108 + (ATGGTG)n Simple_repeat Simple_repeat 3 180 0 1817 178 7 3 chr18 16733293 16733586 -69943962 + AluJo SINE Alu 1 294 -18 238 333 41 7 chr18 16734856 16735003 -69942545 - MER103 DNA DNA -13 153 2 204 321 12 12 chr18 16736480 16736648 -69940900 + (TTATG)n Simple_repeat Simple_repeat 5 172 0 1043 164 12 0 chr18 16736981 16737146 -69940402 - AluJo SINE Alu -17 295 129 232 175 0 12 chr18 16737150 16737236 -69940312 + CT-rich Low_complexity Low_complexity 1 84 0 769 180 0 0 chr18 16737236 16737358 -69940190 - AluJo SINE Alu -187 125 4 15855 128 38 32 chr18 16738688 16741157 -69936391 + Tigger2 DNA MER2_type 2 2489 -229 1694 172 7 10 chr18 16741157 16741448 -69936100 - AluJb SINE Alu -22 290 1 15855 128 38 32 chr18 16741448 16741679 -69935869 + Tigger2 DNA MER2_type 2489 2717 -1 843 295 64 52 chr18 16741964 16742445 -69935103 - L1MC4a LINE L1 -1982 5826 5340 1633 151 3 46 chr18 16743792 16744096 -69933452 + AluJo SINE Alu 6 296 -16 406 289 63 25 chr18 16744612 16744771 -69932777 + MIR SINE MIR 7 171 -91 1612 140 94 38 chr18 16745502 16745560 -69931988 + MER46B DNA MER2_type 1 54 -2677 2513 57 0 13 chr18 16745560 16745861 -69931687 - AluY SINE Alu -14 297 1 1612 140 94 38 chr18 16745861 16746144 -69931404 + MER46B DNA MER2_type 54 236 0 1774 191 23 0 chr18 16746193 16746492 -69931056 + AluJo SINE Alu 1 306 -6 207 0 0 0 chr18 16747619 16747642 -69929906 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 508 207 147 0 chr18 16748623 16748739 -69928809 - AluJo SINE Alu -178 134 2 1136 323 114 22 chr18 16749032 16749238 -69928310 + L1MEc LINE L1 785 971 -5244 2322 82 34 0 chr18 16749238 16749531 -69928017 + AluSp SINE Alu 1 303 -10 1136 323 114 22 chr18 16749531 16750917 -69926631 + L1MEc LINE L1 971 2483 -3732 684 212 104 5 chr18 16751386 16751608 -69925940 + L1ME4a LINE L1 5877 6120 -1 2143 104 0 0 chr18 16751995 16752263 -69925285 - AluSx SINE Alu -18 294 27 182 308 19 58 chr18 16752968 16753072 -69924476 - MIR SINE MIR -84 178 79 638 270 5 15 chr18 16753321 16753525 -69924023 - MER113 DNA MER1_type? -313 208 7 22 0 0 0 chr18 16753644 16753666 -69923882 + AT_rich Low_complexity Low_complexity 1 22 0 334 261 35 35 chr18 16754248 16754363 -69923185 - L3 LINE CR1 -90 1487 1373 1841 152 23 13 chr18 16755310 16755656 -69921892 + AluSx SINE Alu 1 349 0 21 36 0 0 chr18 16755705 16755733 -69921815 + AT_rich Low_complexity Low_complexity 1 28 0 962 187 11 57 chr18 16756019 16756302 -69921246 - AluSx SINE Alu -8 304 35 209 254 28 0 chr18 16756331 16756402 -69921146 + T-rich Low_complexity Low_complexity 2 74 0 1917 136 3 23 chr18 16756886 16757188 -69920360 - AluSx SINE Alu -16 296 1 294 151 19 0 chr18 16757510 16757563 -69919985 - AluYb8 SINE Alu -120 188 135 333 147 167 140 chr18 16757780 16757930 -69919618 + MER96B DNA MER1_type? 1 154 -263 902 113 8 0 chr18 16758106 16758230 -69919318 + AluSx SINE Alu 60 184 -128 2156 103 0 20 chr18 16758374 16758675 -69918873 - AluY SINE Alu -16 295 1 866 162 269 139 chr18 16758912 16759500 -69918048 - MER4A LTR ERV1 0 664 1 224 162 0 0 chr18 16759941 16759978 -69917570 + MIR SINE MIR 118 154 -108 2305 70 0 48 chr18 16759983 16760299 -69917249 - AluY SINE Alu -10 301 1 3679 144 31 24 chr18 16760331 16761005 -69916543 - LTR34 LTR ERV1 0 699 21 1040 86 0 0 chr18 16761006 16761134 -69916414 - AluY SINE Alu -17 294 167 4056 156 51 7 chr18 16762120 16762812 -69914736 + MER72 LTR ERV1 1 722 0 23 33 0 0 chr18 16763108 16763138 -69914410 + AT_rich Low_complexity Low_complexity 1 30 0 1621 259 75 19 chr18 16763161 16763736 -69913812 - L1MC4a LINE L1 -1901 5907 5301 356 324 75 54 chr18 16763747 16764096 -69913452 - L1MC4a LINE L1 -994 5152 4797 2283 67 10 27 chr18 16764195 16764495 -69913053 - AluY SINE Alu -16 295 1 281 270 99 27 chr18 16764533 16764796 -69912752 - L1MC4a LINE L1 -1487 4659 4378 4471 166 84 15 chr18 16764839 16765646 -69911902 + MER21B LTR ERV1 1 863 0 180 176 0 0 chr18 16765658 16765692 -69911856 + A-rich Low_complexity Low_complexity 2 35 0 803 179 0 0 chr18 16766108 16766231 -69911317 - FLAM_A SINE Alu -8 125 3 6347 181 33 16 chr18 16766475 16768467 -69909081 - L1MC1 LINE L1 0 6333 4291 2034 143 10 3 chr18 16768467 16768767 -69908781 - AluY SINE Alu -9 302 1 6347 181 33 16 chr18 16768767 16769155 -69908393 - L1MC1 LINE L1 -2042 4291 3911 785 262 144 59 chr18 16769615 16770107 -69907441 - HAL1b LINE L1 -442 906 373 1876 135 58 4 chr18 16770120 16770485 -69907063 - MSTB1 LTR MaLR -3 429 4 317 347 52 26 chr18 16770537 16770845 -69906703 - HAL1 LINE L1 -1097 1410 1095 201 195 24 0 chr18 16771007 16771048 -69906500 + CT-rich Low_complexity Low_complexity 1 42 0 280 248 124 54 chr18 16771743 16771847 -69905701 - MIR SINE MIR -119 143 27 1150 166 185 50 chr18 16771847 16772106 -69905442 + AluJo SINE Alu 1 294 -8 280 248 124 54 chr18 16772106 16772130 -69905418 - MIR SINE MIR -235 27 6 2071 108 28 3 chr18 16773446 16773734 -69903814 - AluSc SINE Alu -14 295 1 21 36 0 0 chr18 16773857 16773885 -69903663 + AT_rich Low_complexity Low_complexity 1 28 0 8545 200 36 15 chr18 16774000 16776697 -69900851 - L1MB2 LINE L1 -1 6170 3423 225 0 0 0 chr18 16776714 16776739 -69900809 + (T)n Simple_repeat Simple_repeat 1 25 0 266 160 0 0 chr18 16776761 16776811 -69900737 - L1M4 LINE L1 -1722 4488 4439 * 1325 216 12 37 chr18 16776806 16777306 -69900242 - L1M4 LINE L1 -3741 2469 1983 44015 47 3 1 chr18 16777326 16783451 -69894097 - L1PA4 LINE L1 -7 6148 8 1338 186 50 9 chr18 16783461 16783845 -69893703 - L1M4 LINE L1 -4239 1973 1476 8283 100 13 9 chr18 16783846 16785800 -69891748 - L1PA8 LINE L1 0 6172 4212 5407 102 9 0 chr18 16785803 16786556 -69890992 + L1PA8 LINE L1 3445 4204 -1942 2565 228 41 62 chr18 16786553 16787519 -69890029 - L1M4 LINE L1 -4521 1610 605 * 239 263 40 50 chr18 16787553 16787652 -69889896 - L1M4 LINE L1 -5854 254 157 233 200 0 33 chr18 16788150 16788210 -69889338 - L1M4 LINE L1 -6082 59 2 1082 192 0 0 chr18 16788293 16788465 -69889083 + FAM SINE Alu 4 175 0 1605 162 38 35 chr18 16789868 16790158 -69887390 - AluJo SINE Alu -21 291 1 600 284 65 38 chr18 16790165 16790563 -69886985 - LTR16A1 LTR ERVL -1 456 48 371 263 58 73 chr18 16790774 16790979 -69886569 - L1ME3A LINE L1 -1 6169 5968 2184 115 0 6 chr18 16791080 16791392 -69886156 + AluSx SINE Alu 1 310 -2 628 202 55 0 chr18 16791489 16791598 -69885950 - FLAM_C SINE Alu -14 119 5 2017 239 88 56 chr18 16791658 16792544 -69885004 - L1MC5 LINE L1 -491 7470 6614 532 340 123 60 chr18 16792947 16793696 -69883852 + L3 LINE CR1 626 1421 -156 1288 73 34 34 chr18 16795382 16795559 -69881989 - AluY SINE Alu -87 224 48 2350 80 30 0 chr18 16797283 16797582 -69879966 + AluY SINE Alu 1 308 -3 28 0 0 0 chr18 16797942 16797970 -69879578 + AT_rich Low_complexity Low_complexity 1 28 0 292 252 81 16 chr18 16798400 16798523 -69879025 + L1ME4a LINE L1 5977 6107 -14 1798 154 3 30 chr18 16798566 16798865 -69878683 - AluJo SINE Alu -21 291 1 2204 88 3 3 chr18 16800012 16800295 -69877253 - AluSg SINE Alu -27 283 1 894 171 0 19 chr18 16800299 16800457 -69877091 - FRAM SINE Alu -17 159 5 193 316 60 77 chr18 16800954 16801188 -69876360 - L3 LINE CR1 -57 1520 1291 886 159 0 43 chr18 16802100 16802263 -69875285 + AluJb SINE Alu 138 293 -19 568 107 0 0 chr18 16803151 16803226 -69874322 - AluJ/FLAM SINE Alu -236 76 2 192 259 148 37 chr18 16803473 16803554 -69873994 - L2 LINE L2 -46 3226 3137 274 274 0 14 chr18 16803825 16803898 -69873650 - L2 LINE L2 -546 2768 2697 233 239 0 0 chr18 16804495 16804541 -69873007 + MER112 DNA MER1_type 209 254 -6 2284 127 0 0 chr18 16804923 16805230 -69872318 - AluSg SINE Alu -3 307 1 2141 117 20 7 chr18 16805708 16806006 -69871542 + AluSx SINE Alu 1 302 -10 354 308 41 18 chr18 16806990 16807159 -69870389 + MER58A DNA MER1_type 45 217 -7 207 0 0 0 chr18 16807377 16807400 -69870148 + (TG)n Simple_repeat Simple_repeat 2 24 0 473 165 66 0 chr18 16808650 16808741 -69868807 + MER5A DNA MER1_type 13 109 -80 225 242 20 61 chr18 16808808 16808907 -69868641 + MER5A DNA MER1_type 21 115 -74 * 313 182 34 45 chr18 16808821 16808909 -69868639 - MER5A DNA MER1_type -20 169 83 458 279 39 0 chr18 16813231 16813360 -69864188 - MIR SINE MIR -47 215 82 524 238 16 32 chr18 16813722 16813848 -69863700 + L2 LINE L2 3189 3312 -1 217 151 75 0 chr18 16814173 16814226 -69863322 + (CCCG)n Simple_repeat Simple_repeat 1 57 0 186 318 95 56 chr18 16814753 16814932 -69862616 + MIR3 SINE MIR 22 207 -1 1795 160 33 16 chr18 16815423 16815730 -69861818 - AluJo SINE Alu 0 312 1 183 259 190 0 chr18 16815801 16815859 -69861689 - MIR3 SINE MIR -28 180 112 22 0 0 0 chr18 16816236 16816258 -69861290 + AT_rich Low_complexity Low_complexity 1 22 0 423 98 0 0 chr18 16816968 16817029 -69860519 + (TG)n Simple_repeat Simple_repeat 2 62 0 1994 183 14 19 chr18 16818649 16819080 -69858468 - L1MA7 LINE L1 -12 6279 5851 3920 136 15 2 chr18 16819080 16819820 -69857728 - L1MA8 LINE L1 -369 5922 5176 25 0 0 0 chr18 16820214 16820239 -69857309 + AT_rich Low_complexity Low_complexity 1 25 0 2244 89 3 7 chr18 16820719 16821011 -69856537 - AluSp SINE Alu -2 311 21 628 154 8 43 chr18 16821132 16821249 -69856299 + FLAM_C SINE Alu 2 114 -29 643 33 0 33 chr18 16821253 16821345 -69856203 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 199 304 54 43 chr18 16822701 16822793 -69854755 + MIR SINE MIR 41 133 -75 518 281 6 6 chr18 16824348 16824519 -69853029 - L1MA6 LINE L1 0 6300 6130 320 267 118 52 chr18 16824787 16824922 -69852626 - MER5B DNA MER1_type -13 165 22 509 296 158 10 chr18 16826092 16826477 -69851071 - L1ME4a LINE L1 -123 5998 5557 227 310 131 7 chr18 16827195 16827340 -69850208 + L3b LINE CR1 1163 1325 -258 361 271 28 0 chr18 16827642 16827749 -69849799 + MER103 DNA DNA 39 148 -18 189 282 165 24 chr18 16827917 16828002 -69849546 - L2 LINE L2 -9 3263 3167 22 0 0 0 chr18 16828863 16828885 -69848663 + AT_rich Low_complexity Low_complexity 1 22 0 347 266 98 40 chr18 16829443 16829616 -69847932 + MIR SINE MIR 70 252 -10 187 145 0 48 chr18 16829803 16829865 -69847683 + (TGGGGG)n Simple_repeat Simple_repeat 6 64 0 274 339 0 0 chr18 16829870 16830018 -69847530 + G-rich Low_complexity Low_complexity 1 148 0 868 232 110 8 chr18 16830548 16830698 -69846850 + MER2 DNA MER2_type 64 197 -148 2122 139 3 0 chr18 16830698 16831000 -69846548 - AluJo SINE Alu -9 303 1 868 232 110 8 chr18 16831000 16831103 -69846445 + MER2 DNA MER2_type 197 343 -2 2064 85 0 28 chr18 16831344 16831626 -69845922 - AluY SINE Alu -3 308 35 645 236 0 0 chr18 16831661 16831784 -69845764 - FLAM_C SINE Alu -20 123 1 276 223 191 11 chr18 16832561 16832655 -69844893 + L1MB3 LINE L1 6068 6178 -5 1598 156 156 0 chr18 16833174 16833443 -69844105 + AluJo SINE Alu 1 311 -1 751 292 9 23 chr18 16833507 16833726 -69843822 + MIR SINE MIR 47 262 0 465 331 136 19 chr18 16835038 16835413 -69842135 - L2 LINE L2 0 3313 2895 239 310 0 0 chr18 16836848 16836919 -69840629 + L2 LINE L2 3201 3271 -1 393 291 200 6 chr18 16836975 16837150 -69840398 + L3 LINE CR1 549 757 -820 301 277 54 24 chr18 16837191 16837357 -69840191 + L1ME4a LINE L1 5764 5934 -187 458 155 134 10 chr18 16837745 16837842 -69839706 + MIR3 SINE MIR 71 179 -29 2322 88 0 3 chr18 16838734 16839031 -69838517 + AluY SINE Alu 1 296 -15 30 27 0 0 chr18 16839333 16839370 -69838178 + AT_rich Low_complexity Low_complexity 1 37 0 445 351 135 5 chr18 16839370 16839592 -69837956 - MIR SINE MIR -2 260 10 1640 165 6 62 chr18 16839638 16839960 -69837588 - AluJo SINE Alu -8 304 1 262 178 0 0 chr18 16841730 16841775 -69835773 + 5S rRNA rRNA 1 45 -76 259 269 35 48 chr18 16842157 16842302 -69835246 + MER104 DNA Tc2 37 179 -1 2133 144 0 0 chr18 16842313 16842612 -69834936 + AluJb SINE Alu 3 301 -11 2094 113 3 10 chr18 16842677 16842969 -69834579 - AluSg SINE Alu 0 310 21 259 260 0 39 chr18 16843019 16843096 -69834452 + CT-rich Low_complexity Low_complexity 3 76 0 185 0 40 0 chr18 16843375 16843400 -69834148 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1381 263 72 95 chr18 16843929 16844717 -69832831 + L1MC4 LINE L1 7042 7801 -10 1950 163 0 13 chr18 16845187 16845500 -69832048 + AluJb SINE Alu 1 309 -3 2834 91 0 0 chr18 16845646 16846010 -69831538 + THE1B LTR MaLR 1 364 0 1829 154 23 23 chr18 16846065 16846364 -69831184 - AluJb SINE Alu -13 299 1 206 371 98 24 chr18 16846442 16846647 -69830901 + L2 LINE L2 2824 3043 -229 390 298 48 8 chr18 16846735 16846859 -69830689 - L2 LINE L2 -2 3311 3183 390 267 133 15 chr18 16846900 16847035 -69830513 + L2 LINE L2 3162 3312 -1 593 185 8 15 chr18 16848005 16848135 -69829413 + FLAM_C SINE Alu 1 129 -4 313 282 63 42 chr18 16848426 16848568 -69828980 + MIR SINE MIR 23 167 -95 258 143 0 20 chr18 16849299 16849348 -69828200 + AluSp SINE Alu 137 184 -119 1039 234 31 16 chr18 16851062 16851319 -69826229 - MIR SINE MIR 0 262 2 2653 43 0 7 chr18 16851648 16851952 -69825596 - AluY SINE Alu -9 302 1 274 23 47 0 chr18 16852047 16852090 -69825458 + (TG)n Simple_repeat Simple_repeat 2 46 0 513 325 42 0 chr18 16852792 16852958 -69824590 + Tigger8 DNA MER2_type 16 188 -478 206 355 91 0 chr18 16852974 16853084 -69824464 - L2 LINE L2 -3 3269 3150 364 160 21 106 chr18 16853618 16853712 -69823836 - AluJ/FRAM SINE Alu 0 302 217 628 302 11 0 chr18 16853723 16853905 -69823643 - MIR SINE MIR -46 216 33 381 276 20 0 chr18 16853925 16854023 -69823525 + MIR3 SINE MIR 106 205 -3 189 340 187 7 chr18 16854689 16854839 -69822709 - MIR SINE MIR -34 228 52 1911 160 0 3 chr18 16856630 16856924 -69820624 + AluJo SINE Alu 1 293 -19 2317 120 0 0 chr18 16857426 16857734 -69819814 + AluSx SINE Alu 1 308 -4 2341 128 0 0 chr18 16858068 16858380 -69819168 + AluSq SINE Alu 1 312 -1 253 310 52 43 chr18 16858918 16859034 -69818514 - L2 LINE L2 -261 3011 2895 462 278 18 30 chr18 16859229 16859398 -69818150 - L2 LINE L2 -1 3312 3146 2251 75 4 11 chr18 16861120 16861435 -69816113 + AluSc SINE Alu 1 313 0 265 59 0 0 chr18 16861401 16861461 -69816087 + (TAAA)n Simple_repeat Simple_repeat 3 62 0 1870 280 185 22 chr18 16862233 16863658 -69813890 - L2 LINE L2 -16 3297 1643 232 264 146 9 chr18 16864078 16864188 -69813360 - MIR3 SINE MIR -51 157 33 302 271 8 57 chr18 16864792 16864914 -69812634 + L1ME3A LINE L1 6046 6161 -9 357 303 90 13 chr18 16864915 16865070 -69812478 + L2 LINE L2 2694 2860 -454 1966 170 0 0 chr18 16866925 16867231 -69810317 - AluJo SINE Alu -6 306 1 374 277 84 26 chr18 16868157 16868312 -69809236 + MIR3 SINE MIR 43 206 -2 399 325 38 12 chr18 16869095 16869255 -69808293 + MER5B DNA MER1_type 1 164 -14 1758 189 3 3 chr18 16869655 16869961 -69807587 - AluJo SINE Alu -6 306 1 182 240 0 80 chr18 16870197 16870272 -69807276 + MIR SINE MIR 136 204 -58 * 217 226 0 94 chr18 16870263 16870316 -69807232 - L2 LINE L2 0 3272 3225 221 262 155 39 chr18 16870415 16870518 -69807030 + L2 LINE L2 3199 3313 0 271 270 175 15 chr18 16871340 16871477 -69806071 - MIR3 SINE MIR -8 200 42 204 281 22 45 chr18 16871903 16871992 -69805556 - MIR SINE MIR -62 146 60 270 256 160 32 chr18 16874085 16874210 -69803338 + MIR SINE MIR 104 244 -18 222 232 0 18 chr18 16874454 16874510 -69803038 + CT-rich Low_complexity Low_complexity 3 57 0 273 273 164 65 chr18 16876352 16876719 -69800829 - L2 LINE L2 0 3272 2870 302 243 15 107 chr18 16877685 16877891 -69799657 - L1MC5 LINE L1 -302 7659 7473 183 80 0 0 chr18 16877923 16877948 -69799600 + (TCC)n Simple_repeat Simple_repeat 1 25 0 714 255 180 29 chr18 16877982 16878433 -69799115 - L1MC5 LINE L1 -519 7442 6924 1448 136 21 4 chr18 16878571 16878814 -69798734 + Tigger2 DNA MER2_type 2462 2708 -10 200 222 0 123 chr18 16878925 16879006 -69798542 + L2 LINE L2 3202 3272 0 432 291 11 6 chr18 16879435 16879610 -69797938 + (TG)n Simple_repeat Simple_repeat 1 176 0 233 261 9 0 chr18 16879685 16879800 -69797748 + (TG)n Simple_repeat Simple_repeat 1 116 0 529 201 0 12 chr18 16879826 16879995 -69797553 + (TG)n Simple_repeat Simple_repeat 1 167 0 288 233 14 0 chr18 16880009 16880082 -69797466 + (TG)n Simple_repeat Simple_repeat 2 75 0 795 298 11 0 chr18 16880094 16880285 -69797263 + MIR SINE MIR 67 259 -3 248 281 215 22 chr18 16880355 16880490 -69797058 - MIR SINE MIR -56 206 46 190 336 67 10 chr18 16885128 16885232 -69792316 - L2 LINE L2 -480 2834 2725 306 312 73 0 chr18 16885255 16885364 -69792184 - MIR3 SINE MIR -25 183 67 1643 189 8 47 chr18 16885378 16885423 -69792125 - MLT1A1 LTR MaLR 0 365 320 2086 166 83 8 chr18 16885423 16885821 -69791727 + MSTA LTR MaLR 1 428 0 1643 189 8 47 chr18 16885821 16886155 -69791393 - MLT1A1 LTR MaLR -45 320 1 256 246 0 0 chr18 16886971 16887032 -69790516 - MIR SINE MIR -48 214 154 183 229 57 57 chr18 16888124 16888194 -69789354 + L3 LINE CR1 1389 1458 -119 257 340 50 57 chr18 16890710 16890869 -69786679 + L2 LINE L2 3079 3236 -36 1718 184 74 41 chr18 16891166 16891907 -69785641 - MER21A LTR ERV1 -6 925 2 2055 161 39 114 chr18 16892770 16893240 -69784308 + MLT1D LTR MaLR 1 505 0 1726 160 3 72 chr18 16893240 16893571 -69783977 + AluJo SINE Alu 1 308 -4 2313 116 3 0 chr18 16893580 16893891 -69783657 - AluSx SINE Alu 0 312 1 2055 161 39 114 chr18 16893891 16893956 -69783592 + MLT1D LTR MaLR 437 505 0 1975 150 7 0 chr18 16894399 16894699 -69782849 - AluJo SINE Alu -10 302 1 229 269 84 42 chr18 16894901 16895068 -69782480 - Charlie7 DNA MER1_type -7 2605 2432 4633 92 13 13 chr18 16895639 16896273 -69781275 - MER51A LTR ERV1 0 634 1 198 0 0 0 chr18 16898985 16899007 -69778541 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 409 291 178 5 chr18 16900065 16900278 -69777270 + L2 LINE L2 3059 3308 -5 1051 168 0 25 chr18 16900393 16900590 -69776958 + AluJb SINE Alu 1 192 -120 278 324 104 35 chr18 16901114 16901287 -69776261 - MIR SINE MIR -50 212 28 202 215 15 15 chr18 16901287 16901352 -69776196 + CT-rich Low_complexity Low_complexity 4 68 0 2258 155 48 12 chr18 16902049 16902462 -69775086 + MSTA LTR MaLR 1 428 0 1231 177 53 60 chr18 16903426 16903726 -69773822 - AluJo SINE Alu -4 298 1 2065 134 7 0 chr18 16905023 16905314 -69772234 + AluJo SINE Alu 3 295 -17 286 261 33 43 chr18 16906283 16906375 -69771173 - MIR3 SINE MIR -28 180 90 330 259 24 0 chr18 16906848 16906933 -69770615 + MER5A DNA MER1_type 17 103 -86 235 324 57 0 chr18 16907042 16907147 -69770401 + L2 LINE L2 2648 2758 -556 5459 193 35 17 chr18 16907154 16908015 -69769533 + L1MC1 LINE L1 4330 5174 -1159 2232 135 0 0 chr18 16908015 16908327 -69769221 + AluSx SINE Alu 1 312 0 5459 193 35 17 chr18 16908327 16909414 -69768134 + L1MC1 LINE L1 5174 6319 -14 242 269 15 15 chr18 16910337 16910404 -69767144 - L2 LINE L2 0 3313 3247 1864 194 122 21 chr18 16911345 16911830 -69765718 - LTR48 LTR ERV1 -248 539 6 375 241 115 65 chr18 16912304 16912528 -69765020 - MIR SINE MIR -14 248 7 1203 145 100 90 chr18 16913019 16913309 -69764239 + AluJb SINE Alu 1 293 -9 245 333 15 59 chr18 16913724 16913859 -69763689 - L2 LINE L2 -4 3268 3140 974 154 0 0 chr18 16914411 16914560 -69762988 + FRAM SINE Alu 5 153 -23 271 200 62 15 chr18 16915411 16915476 -69762072 + L1MB5 LINE L1 6098 6165 -9 405 256 120 0 chr18 16915619 16915752 -69761796 - L1M3 LINE L1 -667 5513 5365 186 329 286 12 chr18 16916278 16916439 -69761109 - L2 LINE L2 -1 3312 3108 2690 138 27 35 chr18 16917519 16917821 -69759727 - MER41E LTR ERV1 0 512 214 2344 101 7 0 chr18 16917821 16918127 -69759421 - AluSp SINE Alu -5 308 1 2690 138 27 35 chr18 16918127 16918309 -69759239 - MER41E LTR ERV1 -298 214 32 1012 174 12 81 chr18 16918901 16919148 -69758400 + MER46A DNA MER2_type 6 235 -1 1660 151 65 18 chr18 16921522 16921800 -69755748 + AluJo SINE Alu 1 291 -21 460 261 34 17 chr18 16923179 16923298 -69754250 + AluJb SINE Alu 109 229 -83 455 346 67 54 chr18 16924771 16925086 -69752462 + L3b LINE CR1 1262 1580 -3 278 250 181 75 chr18 16925068 16925228 -69752320 - L3b LINE CR1 -114 1469 1293 * 1955 132 17 10 chr18 16925877 16926172 -69751376 - AluJb SINE Alu -14 298 2 207 0 0 0 chr18 16930179 16930202 -69747346 + (TCTG)n Simple_repeat Simple_repeat 1 23 0 30 45 0 0 chr18 16932467 16932511 -69745037 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr18 16932596 16932624 -69744924 + AT_rich Low_complexity Low_complexity 1 28 0 641 353 62 0 chr18 16932631 16932875 -69744673 - MIR SINE MIR 0 262 4 2282 114 0 13 chr18 16933109 16933424 -69744124 - AluSx SINE Alu -1 311 1 2448 240 49 47 chr18 16933999 16934231 -69743317 - Tigger6a DNA MER2_type -523 1074 844 2482 81 3 0 chr18 16934231 16934540 -69743008 + AluY SINE Alu 2 311 0 2448 240 49 47 chr18 16934540 16934916 -69742632 - Tigger6a DNA MER2_type -753 844 461 1333 38 6 0 chr18 16934916 16935076 -69742472 - L1PA5 LINE L1 -2 6152 5992 2448 240 49 47 chr18 16935076 16935280 -69742268 - Tigger6a DNA MER2_type -1136 461 259 1515 91 24 0 chr18 16935272 16935482 -69742066 + Tigger1 DNA MER2_type 909 1123 -1295 * 580 232 0 8 chr18 16935482 16935607 -69741941 - Tigger6a DNA MER2_type -825 258 135 14812 131 14 20 chr18 16935634 16935869 -69741679 + Tigger1 DNA MER2_type 21 256 -2162 3273 97 15 7 chr18 16935869 16936331 -69741217 - L1PB2 LINE L1 -4 6147 5682 14812 131 14 20 chr18 16936331 16937714 -69739834 + Tigger1 DNA MER2_type 256 1620 -798 1551 200 0 35 chr18 16937714 16938024 -69739524 + AluJo SINE Alu 1 299 -13 14812 131 14 20 chr18 16938024 16938818 -69738730 + Tigger1 DNA MER2_type 1620 2418 0 482 236 0 0 chr18 16938823 16938929 -69738619 - Tigger6a DNA MER2_type -976 107 2 374 272 120 25 chr18 16938971 16939129 -69738419 + MIR3 SINE MIR 34 206 -2 1074 137 27 0 chr18 16939189 16939372 -69738176 + L1PB2 LINE L1 5964 6151 0 1997 96 78 0 chr18 16939946 16940217 -69737331 + AluSg SINE Alu 1 292 -18 611 244 103 38 chr18 16942878 16943091 -69734457 + MIR SINE MIR 30 256 -6 1710 155 10 41 chr18 16944492 16944812 -69732736 - AluJo SINE Alu 0 311 1 1982 168 0 3 chr18 16945539 16945848 -69731700 - AluJo SINE Alu -4 308 1 971 285 79 53 chr18 16946366 16946431 -69731117 - L1MEd LINE L1 -4862 1257 1195 2475 63 13 0 chr18 16946431 16946731 -69730817 - AluY SINE Alu -7 304 1 971 285 79 53 chr18 16946731 16947560 -69729988 - L1MEd LINE L1 -4924 1195 441 384 351 106 43 chr18 16947605 16947981 -69729567 - L1MEd LINE L1 -5717 402 3 1995 143 0 17 chr18 16948176 16948477 -69729071 + AluSx SINE Alu 1 296 -16 1883 159 7 0 chr18 16949268 16949558 -69727990 + AluJo SINE Alu 1 292 -20 244 278 122 35 chr18 16950617 16950732 -69726816 + MIR SINE MIR 94 218 -44 227 303 13 0 chr18 16951791 16951867 -69725681 + MLT1E3 LTR MaLR 1 77 -577 499 223 111 31 chr18 16951893 16952231 -69725317 + MLT1E3 LTR MaLR 102 529 -125 345 143 0 121 chr18 16953246 16953337 -69724211 - MLT1H LTR MaLR 0 549 470 318 322 131 16 chr18 16953850 16954033 -69723515 + MIR SINE MIR 35 238 -24 21 0 0 0 chr18 16954741 16954762 -69722786 + AT_rich Low_complexity Low_complexity 1 21 0 256 330 104 35 chr18 16955380 16955553 -69721995 - MIR SINE MIR -50 212 28 202 215 15 15 chr18 16955553 16955618 -69721930 + CT-rich Low_complexity Low_complexity 4 68 0 201 211 126 63 chr18 16956939 16957023 -69720525 - MIR SINE MIR -34 228 136 1992 133 0 0 chr18 16957023 16957309 -69720239 - AluSx SINE Alu -26 286 1 388 220 40 0 chr18 16957551 16957651 -69719897 - MER5A DNA MER1_type -77 112 9 1158 168 102 16 chr18 16960040 16960284 -69717264 + AluJo SINE Alu 17 281 -31 22 0 0 0 chr18 16960284 16960306 -69717242 + AT_rich Low_complexity Low_complexity 1 22 0 286 195 177 44 chr18 16961758 16961871 -69715677 - L2 LINE L2 -1 3312 3185 6180 261 38 37 chr18 16963374 16965941 -69711607 - L1ME1 LINE L1 -5 6161 3599 455 89 0 114 chr18 16965941 16965995 -69711553 - Tigger3(Golem) DNA MER2_type -82 2956 2912 2229 119 3 45 chr18 16965995 16966347 -69711201 - MER1B DNA MER1_type 0 337 1 455 89 0 114 chr18 16966347 16966371 -69711177 - Tigger3(Golem) DNA MER2_type -126 2912 2887 323 237 0 0 chr18 16966372 16966431 -69711117 - Tigger3(Golem) DNA MER2_type -2970 59 1 6180 261 38 37 chr18 16966431 16966474 -69711074 - L1ME1 LINE L1 -2567 3599 3558 213 39 0 0 chr18 16966474 16966500 -69711048 + (TG)n Simple_repeat Simple_repeat 1 26 0 6180 261 38 37 chr18 16966500 16967119 -69710429 - L1ME1 LINE L1 -2608 3558 2888 1787 159 7 3 chr18 16967223 16967519 -69710029 - AluSx SINE Alu -15 297 1 354 256 103 73 chr18 16969827 16970061 -69707487 + L1ME LINE L1 5541 5781 -340 1488 167 0 72 chr18 16970465 16970783 -69706765 + AluJo SINE Alu 2 296 -16 347 283 40 84 chr18 16972419 16972645 -69704903 + MIR SINE MIR 27 242 -20 273 146 12 24 chr18 16973580 16973662 -69703886 + L1ME4a LINE L1 6036 6116 -5 207 318 15 0 chr18 16974686 16974752 -69702796 + MIR SINE MIR 78 144 -118 1391 128 0 0 chr18 16975081 16975277 -69702271 - AluJo SINE Alu -32 280 85 6883 163 146 30 chr18 16976083 16977576 -69699972 - MER52A LTR ERV1 0 1755 1 391 309 61 12 chr18 16978520 16978685 -69698863 + MIR SINE MIR 8 180 -82 2024 172 90 0 chr18 16980458 16980848 -69696700 - MSTB LTR MaLR -1 425 1 203 250 0 0 chr18 16982805 16982845 -69694703 + L2 LINE L2 3264 3303 -10 27 29 0 0 chr18 16982935 16982969 -69694579 + AT_rich Low_complexity Low_complexity 1 34 0 2232 204 82 2 chr18 16983465 16983955 -69693593 + L1MC3 LINE L1 7087 7615 -170 650 166 45 2 chr18 16985444 16985577 -69691971 - L1MC3 LINE L1 -458 7537 7195 1698 172 3 13 chr18 16985708 16986016 -69691532 + AluJo SINE Alu 1 305 -7 2160 103 0 0 chr18 16986107 16986398 -69691150 - AluY SINE Alu -20 291 1 313 237 0 136 chr18 16988175 16988352 -69689196 + L1MC4 LINE L1 6551 6703 -1339 379 261 109 7 chr18 16988413 16988551 -69688997 + MIR3 SINE MIR 33 184 -24 188 283 33 0 chr18 16989693 16989753 -69687795 + MIR SINE MIR 82 143 -65 341 212 44 88 chr18 16990821 16990934 -69686614 + MIR SINE MIR 84 191 -71 317 190 80 57 chr18 16991134 16991260 -69686288 - L1MA7 LINE L1 0 6312 6176 * 823 172 37 6 chr18 16991259 16991422 -69686126 - L1MA9 LINE L1 -231 6081 5914 24 0 0 0 chr18 16992575 16992599 -69684949 + AT_rich Low_complexity Low_complexity 1 24 0 1109 192 107 4 chr18 16992629 16992863 -69684685 - AluJo SINE Alu -39 273 16 225 0 0 0 chr18 16993278 16993303 -69684245 + (A)n Simple_repeat Simple_repeat 1 25 0 2253 89 0 0 chr18 16995066 16995359 -69682189 - AluSc SINE Alu -16 293 1 190 237 132 0 chr18 16995659 16995735 -69681813 - MIR SINE MIR -74 134 49 21 82 0 0 chr18 16996441 16996490 -69681058 + AT_rich Low_complexity Low_complexity 1 49 0 784 239 133 79 chr18 16996674 16996701 -69680847 - MLT1J LTR MaLR -74 541 517 2115 98 3 35 chr18 16996701 16997018 -69680530 + AluSx SINE Alu 1 307 -5 784 239 133 79 chr18 16997018 16997365 -69680183 - MLT1J LTR MaLR -98 517 38 2073 122 0 3 chr18 16998300 16998611 -69678937 + AluSx SINE Alu 1 310 -2 240 236 0 18 chr18 16999451 16999506 -69678042 + T-rich Low_complexity Low_complexity 3 56 0 1954 152 0 3 chr18 16999508 16999817 -69677731 - AluJo SINE Alu -3 309 2 2294 89 0 0 chr18 17000330 17000633 -69676915 - AluY SINE Alu -8 303 1 776 225 99 5 chr18 17000719 17000910 -69676638 - MER6B DNA MER2_type 0 210 2 1885 135 0 0 chr18 17001777 17002098 -69675450 - AluSx SINE Alu 0 325 5 971 94 0 0 chr18 17002100 17002228 -69675320 - AluSq/x SINE Alu -175 137 10 219 292 69 14 chr18 17003129 17003201 -69674347 + L2 LINE L2 3141 3216 -56 6751 78 7 7 chr18 17003778 17004769 -69672779 - L1PB1 LINE L1 -2 6149 5158 2416 68 3 0 chr18 17004839 17005149 -69672399 + AluY SINE Alu 1 311 0 225 0 0 0 chr18 17007525 17007550 -69669998 + (T)n Simple_repeat Simple_repeat 1 25 0 261 0 0 0 chr18 17007679 17007708 -69669840 + (T)n Simple_repeat Simple_repeat 1 29 0 2295 89 0 0 chr18 17007761 17008063 -69669485 + AluY SINE Alu 1 302 -9 2113 147 14 3 chr18 17009815 17010170 -69667378 - MER46B DNA MER2_type 0 236 3 245 376 0 9 chr18 17010660 17010769 -69666779 + (TG)n Simple_repeat Simple_repeat 1 108 0 1611 173 7 16 chr18 17011555 17011862 -69665686 - AluJo SINE Alu -3 309 6 24 77 0 0 chr18 17012056 17012108 -69665440 + AT_rich Low_complexity Low_complexity 1 52 0 378 312 41 94 chr18 17013025 17013419 -69664129 + L2 LINE L2 2882 3254 -18 2120 109 7 0 chr18 17014978 17015282 -69662266 + AluSx SINE Alu 1 306 -6 1230 154 109 8 chr18 17015494 17015741 -69661807 + AluSx SINE Alu 39 310 -2 1932 151 0 16 chr18 17017858 17018175 -69659373 - AluSx SINE Alu 0 312 1 543 228 0 0 chr18 17018916 17019096 -69658452 + (TG)n Simple_repeat Simple_repeat 1 180 0 285 250 21 5 chr18 17019134 17019330 -69658218 + (TG)n Simple_repeat Simple_repeat 1 199 0 411 68 0 0 chr18 17020363 17020422 -69657126 + (TG)n Simple_repeat Simple_repeat 2 60 0 573 243 83 35 chr18 17020505 17020674 -69656874 - MER5B DNA MER1_type -1 177 1 284 291 95 40 chr18 17020799 17020947 -69656601 - MIR SINE MIR -59 203 48 760 224 127 13 chr18 17021162 17021390 -69656158 + MER112 DNA MER1_type 1 254 -6 22 70 0 0 chr18 17021941 17021984 -69655564 + AT_rich Low_complexity Low_complexity 1 43 0 1934 142 16 0 chr18 17021992 17022295 -69655253 + AluSx SINE Alu 1 308 -4 294 179 0 0 chr18 17022507 17022563 -69654985 + (TCCA)n Simple_repeat Simple_repeat 2 57 0 509 200 33 0 chr18 17022598 17022688 -69654860 - FLAM_A SINE Alu -27 115 23 941 198 0 0 chr18 17022753 17022915 -69654633 - FAM SINE Alu -13 162 1 1346 167 97 4 chr18 17023365 17023623 -69653925 + AluSx SINE Alu 1 282 -30 207 0 0 0 chr18 17024413 17024436 -69653112 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2209 78 10 0 chr18 17024443 17024750 -69652798 - AluSg SINE Alu 0 310 1 341 288 148 16 chr18 17026641 17026898 -69650650 - L1ME3A LINE L1 -38 6132 5842 238 245 128 103 chr18 17029205 17029409 -69648139 + MER20 DNA MER1_type 8 216 -3 228 35 0 0 chr18 17030983 17031012 -69646536 + (T)n Simple_repeat Simple_repeat 1 29 0 2165 106 0 0 chr18 17031065 17031367 -69646181 + AluY SINE Alu 1 302 -9 2161 146 11 3 chr18 17033116 17033472 -69644076 - MER46B DNA MER2_type 0 236 3 245 376 0 9 chr18 17033962 17034071 -69643477 + (TG)n Simple_repeat Simple_repeat 1 108 0 1611 173 7 16 chr18 17034857 17035164 -69642384 - AluJo SINE Alu -3 309 6 24 77 0 0 chr18 17035358 17035410 -69642138 + AT_rich Low_complexity Low_complexity 1 52 0 378 312 41 94 chr18 17036327 17036721 -69640827 + L2 LINE L2 2882 3254 -18 2111 109 7 0 chr18 17038280 17038583 -69638965 + AluSx SINE Alu 1 305 -7 1271 146 109 8 chr18 17038795 17039042 -69638506 + AluSx SINE Alu 39 310 -2 986 169 45 0 chr18 17039254 17039431 -69638117 - MER5A DNA MER1_type -4 185 1 259 270 63 0 chr18 17039480 17039543 -69638005 - L2 LINE L2 -2 3311 3245 1951 148 0 16 chr18 17041069 17041386 -69636162 - AluSx SINE Alu 0 312 1 543 228 0 0 chr18 17042126 17042306 -69635242 + (TG)n Simple_repeat Simple_repeat 1 180 0 249 281 10 10 chr18 17042344 17042440 -69635108 + (TG)n Simple_repeat Simple_repeat 1 96 0 289 188 24 0 chr18 17042452 17042537 -69635011 + (TG)n Simple_repeat Simple_repeat 1 87 0 411 68 0 0 chr18 17043559 17043618 -69633930 + (TG)n Simple_repeat Simple_repeat 2 60 0 573 243 83 35 chr18 17043701 17043870 -69633678 - MER5B DNA MER1_type -1 177 1 284 291 95 40 chr18 17043995 17044143 -69633405 - MIR SINE MIR -59 203 48 760 224 127 13 chr18 17044358 17044586 -69632962 + MER112 DNA MER1_type 1 254 -6 22 70 0 0 chr18 17045137 17045180 -69632368 + AT_rich Low_complexity Low_complexity 1 43 0 1934 142 16 0 chr18 17045188 17045491 -69632057 + AluSx SINE Alu 1 308 -4 294 179 0 0 chr18 17045703 17045759 -69631789 + (TCCA)n Simple_repeat Simple_repeat 2 57 0 509 200 33 0 chr18 17045794 17045884 -69631664 - FLAM_A SINE Alu -27 115 23 941 198 0 0 chr18 17045949 17046111 -69631437 - FAM SINE Alu -13 162 1 213 39 0 0 chr18 17046866 17046892 -69630656 + (A)n Simple_repeat Simple_repeat 1 26 0 3522 235 89 56 chr18 17046943 17047716 -69629832 - L1MEc LINE L1 -2508 3707 2961 826 176 0 0 chr18 17047716 17047847 -69629701 - FLAM_C SINE Alu -2 131 1 3522 235 89 56 chr18 17047847 17049008 -69628540 - L1MEc LINE L1 -3254 2961 1733 2075 269 65 21 chr18 17049021 17049705 -69627843 - L1M4c LINE L1 -4436 2702 1834 216 0 0 0 chr18 17049705 17049729 -69627819 + (TC)n Simple_repeat Simple_repeat 1 24 0 2075 269 65 21 chr18 17049729 17049994 -69627554 - L1M4c LINE L1 -5304 1834 1582 7676 191 36 38 chr18 17050006 17051672 -69625876 - L1M4c LINE L1 -5179 1680 18 2343 73 0 3 chr18 17051685 17051988 -69625560 - AluY SINE Alu -9 302 1 636 220 0 25 chr18 17052193 17052311 -69625237 - FLAM_A SINE Alu -25 117 3 22 35 0 0 chr18 17052311 17052340 -69625208 + AT_rich Low_complexity Low_complexity 1 29 0 213 315 54 0 chr18 17052572 17052664 -69624884 - MIR SINE MIR -73 135 39 1664 126 14 0 chr18 17053417 17053706 -69623842 + L1PA16 LINE L1 5237 5529 -637 1343 64 0 0 chr18 17053706 17053879 -69623669 + AluY SINE Alu 137 309 -2 3840 149 12 6 chr18 17053879 17054525 -69623023 + L1PA16 LINE L1 5514 6163 -3 806 87 0 17 chr18 17054691 17054806 -69622742 - AluSx SINE Alu -8 304 192 948 118 7 0 chr18 17054808 17054944 -69622604 - AluSx SINE Alu -175 137 1 203 156 44 0 chr18 17054958 17055003 -69622545 + A-rich Low_complexity Low_complexity 2 48 0 948 241 24 24 chr18 17055624 17055873 -69621675 + MIR SINE MIR 13 261 -1 1670 180 0 0 chr18 17057431 17057714 -69619834 - AluJo SINE Alu -29 283 1 418 165 35 0 chr18 17058144 17058229 -69619319 - MER5A DNA MER1_type -95 94 7 330 212 45 0 chr18 17058245 17058311 -69619237 - MIR SINE MIR -71 191 123 679 239 74 19 chr18 17059335 17059566 -69617982 + MIR SINE MIR 7 252 -10 5127 61 0 9 chr18 17059618 17060270 -69617278 - L1PA8 LINE L1 0 6172 5527 1306 50 0 33 chr18 17060270 17060452 -69617096 + L1P3 LINE L1 5301 5476 -678 345 47 0 0 chr18 17061712 17061755 -69615793 + (TG)n Simple_repeat Simple_repeat 2 44 0 1880 133 3 29 chr18 17061887 17062202 -69615346 + AluSx SINE Alu 1 307 -5 333 0 0 0 chr18 17062462 17062499 -69615049 + (T)n Simple_repeat Simple_repeat 1 37 0 22 35 0 0 chr18 17062505 17062534 -69615014 + GC_rich Low_complexity Low_complexity 1 29 0 768 201 88 6 chr18 17064162 17064321 -69613227 - FAM SINE Alu -3 172 1 312 291 13 0 chr18 17064322 17064401 -69613147 + MIR SINE MIR 66 145 -117 1991 128 3 0 chr18 17064557 17064861 -69612687 - AluSx SINE Alu -7 305 1 741 142 0 9 chr18 17071396 17071509 -69606039 - FLAM_C SINE Alu -11 132 21 330 321 95 32 chr18 17071923 17072396 -69605152 + L1MC/D LINE L1 5258 5760 -2048 261 0 0 0 chr18 17073830 17073859 -69603689 + (A)n Simple_repeat Simple_repeat 1 29 0 30 0 0 0 chr18 17073869 17073899 -69603649 + AT_rich Low_complexity Low_complexity 1 30 0 467 114 0 0 chr18 17074710 17074780 -69602768 - L1MB1 LINE L1 -1 6167 6098 1525 148 21 81 chr18 17075196 17075528 -69602020 + AluJo SINE Alu 1 312 0 2191 98 3 0 chr18 17075530 17075827 -69601721 + AluSg1 SINE Alu 1 298 -11 361 161 16 0 chr18 17076629 17076691 -69600857 + MER116 DNA Mariner 3 65 -15 617 260 164 49 chr18 17077023 17077083 -69600465 + Charlie8 DNA MER1_type 36 88 -2329 2061 107 33 3 chr18 17077083 17077382 -69600166 + AluSx SINE Alu 1 308 -4 617 260 164 49 chr18 17077382 17077748 -69599800 + Charlie8 DNA MER1_type 88 511 -1906 1757 166 0 7 chr18 17078937 17079226 -69598322 - AluJo SINE Alu -25 287 1 474 275 23 0 chr18 17079330 17079461 -69598087 - MARNA DNA Mariner -239 347 214 24 0 0 0 chr18 17079718 17079742 -69597806 + AT_rich Low_complexity Low_complexity 1 24 0 180 146 24 24 chr18 17080750 17080791 -69596757 + MIR SINE MIR 109 149 -113 530 283 119 13 chr18 17080806 17081032 -69596516 + MER112 DNA MER1_type 5 254 -6 6714 195 26 72 chr18 17081295 17081741 -69595807 + L1 LINE L1 3322 3787 -2359 2010 115 3 0 chr18 17081741 17082027 -69595521 + AluSx SINE Alu 1 287 -25 6714 195 26 72 chr18 17082027 17082248 -69595300 + L1 LINE L1 3787 4017 -2129 7740 147 78 123 chr18 17082248 17084085 -69593463 - MER52A LTR ERV1 0 1755 1 6714 195 26 72 chr18 17084085 17085214 -69592334 + L1 LINE L1 4017 5036 -1110 986 234 98 11 chr18 17085216 17085502 -69592046 - MLT1A1 LTR MaLR -1 364 54 342 0 0 0 chr18 17086027 17086065 -69591483 + (TG)n Simple_repeat Simple_repeat 1 38 0 919 234 62 9 chr18 17086262 17086489 -69591059 + MER8 DNA MER2_type 1 239 0 2115 118 0 13 chr18 17086581 17086894 -69590654 - AluSx SINE Alu -2 310 2 2123 125 0 0 chr18 17086896 17087193 -69590355 - AluSq SINE Alu -16 297 1 200 59 29 0 chr18 17087201 17087235 -69590313 + (TTTTTG)n Simple_repeat Simple_repeat 2 36 0 2427 72 0 0 chr18 17087679 17087984 -69589564 + AluSx SINE Alu 1 305 -7 312 291 13 0 chr18 17088140 17088219 -69589329 - MIR SINE MIR -117 145 66 768 201 88 6 chr18 17088220 17088379 -69589169 + FAM SINE Alu 1 172 -3 357 317 97 26 chr18 17089847 17090074 -69587474 + L1ME4a LINE L1 5715 5957 -164 2217 75 0 23 chr18 17090100 17090406 -69587142 + AluY SINE Alu 1 299 -12 579 133 33 11 chr18 17091276 17091366 -69586182 + FLAM_C SINE Alu 25 116 -27 283 192 23 41 chr18 17091367 17091539 -69586009 + (TAGA)n Simple_repeat Simple_repeat 4 172 0 185 65 32 0 chr18 17091953 17091984 -69585564 + (TA)n Simple_repeat Simple_repeat 2 33 0 2534 39 7 3 chr18 17094992 17095299 -69582249 + AluY SINE Alu 1 308 -3 216 0 0 0 chr18 17095299 17095323 -69582225 + (T)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr18 17095445 17095467 -69582081 + GC_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr18 17095487 17095513 -69582035 + (A)n Simple_repeat Simple_repeat 1 26 0 180 0 0 0 chr18 17095513 17095533 -69582015 + (TA)n Simple_repeat Simple_repeat 2 21 0 1047 119 13 6 chr18 17095974 17096133 -69581415 + FRAM SINE Alu 1 157 -19 313 128 0 0 chr18 17097372 17097419 -69580129 + AluSg/x SINE Alu 85 131 -169 1656 151 62 7 chr18 17097423 17097714 -69579834 + AluSx SINE Alu 1 307 -5 252 0 0 0 chr18 17103104 17103132 -69574416 + (CTG)n Simple_repeat Simple_repeat 2 29 0 324 345 64 25 chr18 17105963 17106166 -69571382 + L3 LINE CR1 1331 1541 -36 295 294 166 0 chr18 17106187 17106350 -69571198 + L1M4 LINE L1 4207 4396 -1750 21 36 0 0 chr18 17107970 17107998 -69569550 + AT_rich Low_complexity Low_complexity 1 28 0 181 348 170 28 chr18 17108280 17108421 -69569127 + MIR SINE MIR 23 183 -79 2287 91 10 3 chr18 17108506 17108804 -69568744 + AluSc SINE Alu 1 300 -9 2216 68 0 11 chr18 17108929 17109208 -69568340 + AluY SINE Alu 26 301 -10 7645 192 37 38 chr18 17109221 17110886 -69566662 + L1M4b LINE L1 18 1680 -5179 2154 269 65 22 chr18 17110896 17111164 -69566384 + L1M4b LINE L1 1580 1835 -5303 234 0 0 0 chr18 17111164 17111190 -69566358 + (GA)n Simple_repeat Simple_repeat 1 26 0 2154 269 65 22 chr18 17111190 17111874 -69565674 + L1M4b LINE L1 1835 2702 -4436 3707 236 89 56 chr18 17111887 17113049 -69564499 + L1MEc LINE L1 1733 2960 -3255 864 177 0 0 chr18 17113049 17113179 -69564369 + FLAM_C SINE Alu 2 131 -2 3707 236 89 56 chr18 17113179 17113952 -69563596 + L1MEc LINE L1 2960 3707 -2508 272 268 73 0 chr18 17114339 17114421 -69563127 - L1MC4 LINE L1 -1340 6702 6615 27 62 0 0 chr18 17114504 17114552 -69562996 + AT_rich Low_complexity Low_complexity 1 48 0 1751 185 3 7 chr18 17114772 17115080 -69562468 + AluJb SINE Alu 1 307 -5 225 0 0 0 chr18 17120730 17120755 -69556793 + (CTG)n Simple_repeat Simple_repeat 2 26 0 324 345 64 25 chr18 17123585 17123788 -69553760 + L3 LINE CR1 1331 1541 -36 295 294 166 0 chr18 17123809 17123972 -69553576 + L1MEc LINE L1 4276 4465 -1750 21 36 0 0 chr18 17125592 17125620 -69551928 + AT_rich Low_complexity Low_complexity 1 28 0 182 358 159 26 chr18 17125902 17126053 -69551495 + MIR SINE MIR 23 193 -69 2364 93 0 0 chr18 17126127 17126429 -69551119 + AluY SINE Alu 1 302 -9 1948 100 8 0 chr18 17126551 17126810 -69550738 + AluSx SINE Alu 26 286 -26 1747 83 0 0 chr18 17126948 17127165 -69550383 + AluSq SINE Alu 72 288 -25 4467 35 6 0 chr18 17127165 17127681 -69549867 + HERV17 LTR ERV1 5501 6019 -2607 294 77 0 0 chr18 17127674 17127713 -69549835 + HERV17 LTR ERV1 7510 7548 -1078 * 2492 48 0 0 chr18 17127703 17127995 -69549553 + HERV17 LTR ERV1 8335 8626 0 2711 40 3 6 chr18 17127995 17128322 -69549226 + LTR17 LTR ERV1 1 326 -454 261 0 0 0 chr18 17128322 17128351 -69549197 + (A)n Simple_repeat Simple_repeat 1 29 0 29 0 0 0 chr18 17128361 17128390 -69549158 + AT_rich Low_complexity Low_complexity 1 29 0 2066 134 0 3 chr18 17129204 17129502 -69548046 - AluSc SINE Alu -12 297 1 598 258 99 39 chr18 17130595 17130828 -69546720 - L1MC4 LINE L1 -402 7640 7394 1521 182 143 53 chr18 17130836 17130972 -69546576 - LTR2B LTR ERV1 0 490 368 2609 49 0 3 chr18 17130972 17131276 -69546272 - AluY SINE Alu -8 303 1 1521 182 143 53 chr18 17131276 17131382 -69546166 - LTR2B LTR ERV1 -122 368 273 276 53 0 0 chr18 17131382 17131420 -69546128 + (CAGAA)n Simple_repeat Simple_repeat 1 38 0 1521 182 143 53 chr18 17131420 17131594 -69545954 - LTR2B LTR ERV1 -217 273 35 22 0 0 0 chr18 17132067 17132089 -69545459 + AT_rich Low_complexity Low_complexity 1 22 0 2143 75 26 62 chr18 17132186 17132491 -69545057 - AluSp SINE Alu -19 294 1 465 278 44 83 chr18 17135115 17135367 -69542181 + MIR SINE MIR 21 262 0 2048 137 0 3 chr18 17136186 17136486 -69541062 + AluSx SINE Alu 1 299 -13 1593 92 0 9 chr18 17136488 17136705 -69540843 + AluY SINE Alu 1 215 -96 225 0 0 0 chr18 17137213 17137238 -69540310 + (A)n Simple_repeat Simple_repeat 1 25 0 2004 128 4 0 chr18 17139267 17139568 -69537980 + AluSq SINE Alu 1 302 0 1689 144 6 98 chr18 17139582 17139909 -69537639 + AluJo SINE Alu 4 300 -2 1190 234 224 8 chr18 17139924 17140398 -69537150 + L2 LINE L2 1766 2341 -973 1881 176 11 26 chr18 17140404 17140751 -69536797 - MER7A DNA MER2_type -6 340 1 1734 280 130 43 chr18 17140751 17141621 -69535927 + L2 LINE L2 2342 3293 -20 2246 93 0 7 chr18 17142542 17142833 -69534715 + AluSp SINE Alu 1 289 -24 724 117 0 25 chr18 17142995 17143115 -69534433 + LTR9B LTR ERV1 445 561 -83 22 35 0 0 chr18 17143202 17143231 -69534317 + AT_rich Low_complexity Low_complexity 1 29 0 1099 79 0 0 chr18 17143400 17143540 -69534008 + AluSp/q SINE Alu 164 303 -10 2066 134 0 3 chr18 17144242 17144540 -69533008 - AluSc SINE Alu -12 297 1 598 258 99 39 chr18 17147117 17147350 -69530198 - L1MC4 LINE L1 -402 7640 7394 1497 178 143 59 chr18 17147358 17147497 -69530051 - LTR2B LTR ERV1 0 490 364 2632 53 0 0 chr18 17147497 17147800 -69529748 - AluY SINE Alu -8 303 1 1497 178 143 59 chr18 17147800 17147906 -69529642 - LTR2B LTR ERV1 -126 364 268 276 53 0 0 chr18 17147906 17147944 -69529604 + (CAGAA)n Simple_repeat Simple_repeat 1 38 0 1497 178 143 59 chr18 17147944 17148118 -69529430 - LTR2B LTR ERV1 -222 268 35 22 0 0 0 chr18 17148591 17148613 -69528935 + AT_rich Low_complexity Low_complexity 1 22 0 2163 72 26 62 chr18 17148710 17149016 -69528532 - AluSp SINE Alu -18 295 1 465 278 44 83 chr18 17151639 17151891 -69525657 + MIR SINE MIR 21 262 0 2076 133 0 3 chr18 17152711 17153011 -69524537 + AluSx SINE Alu 1 299 -13 2250 121 0 0 chr18 17153013 17153319 -69524229 + AluSx SINE Alu 1 306 -6 727 212 88 0 chr18 17153845 17153982 -69523566 + FAM SINE Alu 1 149 -36 21 36 0 0 chr18 17153990 17154018 -69523530 + AT_rich Low_complexity Low_complexity 1 28 0 2196 96 10 13 chr18 17154540 17154841 -69522707 + AluSx SINE Alu 1 300 -12 1992 210 93 35 chr18 17154853 17155484 -69522064 + L1MC2 LINE L1 2337 3054 -3092 4443 154 21 35 chr18 17155484 17156274 -69521274 + MER4E LTR ERV1 1 779 0 1992 210 93 35 chr18 17156274 17156606 -69520942 + L1MC2 LINE L1 3054 3365 -2781 2433 116 57 44 chr18 17156618 17157069 -69520479 + LTR56 LTR ERV1 8 467 0 1318 229 71 47 chr18 17157072 17157539 -69520009 + L1MC2 LINE L1 3371 3848 -2298 554 165 21 0 chr18 17157565 17157662 -69519886 + LTR59 LTR ERV1 4 102 -495 2390 219 70 57 chr18 17157674 17158388 -69519160 + MER50 LTR ERV1 12 734 0 1634 134 39 42 chr18 17158389 17158552 -69518996 + LTR59 LTR ERV1 122 285 -312 2317 196 183 108 chr18 17158552 17159501 -69518047 + LTR28 LTR ERV1 1 1020 0 1634 134 39 42 chr18 17159501 17159644 -69517904 + LTR59 LTR ERV1 285 427 -170 746 199 44 0 chr18 17159632 17159768 -69517780 + LTR34 LTR ERV1 558 699 0 * 1584 177 42 82 chr18 17159768 17160220 -69517328 + L1MC2 LINE L1 3845 4278 -1868 40654 67 16 3 chr18 17160231 17166298 -69511250 + L1PA5 LINE L1 11 6151 -3 1109 225 96 60 chr18 17166289 17166756 -69510792 + L1MC2 LINE L1 4252 4735 -1411 * 595 213 53 18 chr18 17166743 17166912 -69510636 + L1MC2 LINE L1 5089 5263 -883 * 486 189 273 8 chr18 17166915 17167047 -69510501 + Tigger3(Golem) DNA MER2_type 1 167 -2862 * 2816 123 306 8 chr18 17167044 17167635 -69509913 + Tigger3(Golem) DNA MER2_type 2263 3029 0 1937 141 41 3 chr18 17167635 17167975 -69509573 + L1MC2 LINE L1 5267 5619 -725 857 133 192 0 chr18 17167975 17168126 -69509422 + AluSg/x SINE Alu 122 301 -9 1519 151 64 4 chr18 17168127 17168392 -69509156 + L1MC2 LINE L1 5622 5902 -442 2353 93 3 0 chr18 17168494 17168795 -69508753 + AluSx SINE Alu 1 302 -10 3778 120 51 83 chr18 17168895 17169677 -69507871 + L1MA4 LINE L1 5533 6289 -11 2411 70 10 0 chr18 17171600 17171901 -69505647 + AluSg SINE Alu 3 306 -4 554 258 163 34 chr18 17172157 17172366 -69505182 - MIR SINE MIR 0 262 27 1894 204 3 8 chr18 17172902 17173254 -69504294 + MLT2C1 LTR ERVL 1 350 -47 269 188 0 43 chr18 17173281 17173350 -69504198 + MLT2C1 LTR ERVL 455 520 0 760 309 92 9 chr18 17173350 17173687 -69503861 + ERVL-C1 LTR ERVL 1 365 -5399 1129 76 14 0 chr18 17173687 17173832 -69503716 + AluSg/x SINE Alu 163 309 -3 1416 223 35 20 chr18 17173836 17174261 -69503287 + ERVL-C1 LTR ERVL 365 868 -4896 * 7639 190 40 11 chr18 17174259 17175525 -69502023 + ERVL-C1 LTR ERVL 1404 2791 -2973 2664 169 47 0 chr18 17175525 17175969 -69501579 + MLT1C LTR MaLR 1 465 -2 7639 190 40 11 chr18 17175969 17176614 -69500934 + ERVL-C1 LTR ERVL 2791 3415 -2349 318 279 108 27 chr18 17176638 17176749 -69500799 + MIR SINE MIR 13 132 -130 318 306 30 37 chr18 17178154 17178288 -69499260 + MIR3 SINE MIR 70 202 -6 1444 242 62 14 chr18 17178452 17178820 -69498728 - MLT1E LTR MaLR -8 585 200 751 105 0 0 chr18 17179242 17179337 -69498211 + AluJ/FLAM SINE Alu 5 99 -213 252 337 50 0 chr18 17179442 17179543 -69498005 - Tigger8 DNA MER2_type -526 140 35 269 262 267 33 chr18 17179606 17179775 -69497773 - MLT1L LTR MaLR -4 611 483 2049 143 52 27 chr18 17179775 17180140 -69497408 - THE1C LTR MaLR 0 375 2 269 262 267 33 chr18 17180140 17180180 -69497368 - MLT1L LTR MaLR -132 483 353 967 189 24 29 chr18 17180558 17180764 -69496784 - MER3 DNA MER1_type -4 205 1 1836 142 24 3 chr18 17181331 17181619 -69495929 + 7SLRNA srpRNA srpRNA 21 314 -6 212 229 14 29 chr18 17181623 17181693 -69495855 + (TATATG)n Simple_repeat Simple_repeat 2 70 0 378 267 91 68 chr18 17181715 17181936 -69495612 + L1ME4a LINE L1 5619 5844 -277 733 179 8 0 chr18 17182830 17182947 -69494601 + FRAM SINE Alu 33 150 -26 414 0 0 0 chr18 17182948 17182994 -69494554 + (TG)n Simple_repeat Simple_repeat 2 47 0 237 308 88 36 chr18 17183893 17183914 -69493634 - HAL1b LINE L1 -740 608 590 1894 189 33 17 chr18 17183914 17184273 -69493275 - MLT1A1 LTR MaLR 0 365 1 237 308 88 36 chr18 17184273 17184501 -69493047 - HAL1b LINE L1 -758 590 346 2106 124 10 0 chr18 17185324 17185630 -69491918 - AluSx SINE Alu -3 309 1 2089 188 60 143 chr18 17185751 17186236 -69491312 - LTR8A LTR ERV1 0 727 326 2144 145 0 0 chr18 17186236 17186539 -69491009 + AluSx SINE Alu 1 303 -9 2089 188 60 143 chr18 17186539 17186815 -69490733 - LTR8A LTR ERV1 -401 326 29 1228 255 69 56 chr18 17186942 17187538 -69490010 - L2 LINE L2 0 3313 2708 190 314 50 16 chr18 17187567 17187688 -69489860 - L2 LINE L2 -1967 1347 1223 1214 223 151 72 chr18 17188069 17188546 -69489002 + MER21B LTR ERV1 5 626 -305 379 191 51 51 chr18 17188548 17188672 -69488876 - LTR26E LTR ERV1 -1 610 482 3394 83 9 7 chr18 17188672 17189105 -69488443 - MER57B LTR ERV1 0 434 1 17217 95 85 57 chr18 17189106 17190952 -69486596 - MER57B-int LTR ERV1 -1 7536 5582 2249 118 0 0 chr18 17190952 17191249 -69486299 + AluSx SINE Alu 1 297 -15 17217 95 85 57 chr18 17191249 17192213 -69485335 - MER57B-int LTR ERV1 -1955 5582 4647 8309 146 61 21 chr18 17192214 17193717 -69483831 - MER57B-int LTR ERV1 -3194 4343 2781 957 134 13 32 chr18 17193713 17193870 -69483678 - MER57B-int LTR ERV1 -4908 2629 2476 * 5529 145 11 3 chr18 17193875 17194742 -69482806 - MER57B-int LTR ERV1 -4382 2331 709 481 91 0 15 chr18 17194731 17194797 -69482751 - MER57B-int LTR ERV1 -6127 1410 1346 * 1298 97 0 6 chr18 17194791 17194966 -69482582 - MER57B-int LTR ERV1 -6570 967 794 * 4495 130 25 12 chr18 17194960 17195631 -69481917 - MER57B-int LTR ERV1 -6857 680 1 2636 118 52 10 chr18 17195635 17196041 -69481507 - MER57B LTR ERV1 -9 425 3 1403 211 32 40 chr18 17196042 17196461 -69481087 - LTR26E LTR ERV1 -116 505 11 1262 215 77 24 chr18 17196479 17196777 -69480771 + MER21B LTR ERV1 528 841 -22 800 115 39 39 chr18 17197619 17197726 -69479822 + FLAM_C SINE Alu 2 111 -201 2597 104 63 65 chr18 17197726 17198186 -69479362 - LTR46 LTR ERV1 0 460 2 800 115 39 39 chr18 17198186 17198208 -69479340 + FLAM_C SINE Alu 110 131 -181 2319 100 3 0 chr18 17198424 17198735 -69478813 - AluSx SINE Alu 0 312 1 2434 139 80 23 chr18 17198736 17199356 -69478192 - L1M1 LINE L1 -743 5403 4837 1722 167 39 0 chr18 17199907 17200188 -69477360 - AluJb SINE Alu -19 293 2 1682 205 148 7 chr18 17200516 17200920 -69476628 - MER119 DNA MER1_type -7 576 116 2215 97 0 3 chr18 17201224 17201522 -69476026 + AluSq SINE Alu 1 297 -16 656 198 0 0 chr18 17202305 17202411 -69475137 - AluJb SINE Alu -20 292 187 2174 98 0 54 chr18 17202845 17203162 -69474386 - AluSg SINE Alu -10 300 1 2187 94 14 3 chr18 17203492 17203780 -69473768 - AluSx SINE Alu -21 291 1 251 232 24 73 chr18 17203780 17203862 -69473686 - MIR SINE MIR -49 213 136 2243 125 45 31 chr18 17204022 17204381 -69473167 + THE1B LTR MaLR 1 364 0 241 143 0 20 chr18 17205795 17205844 -69471704 + L1ME4a LINE L1 6072 6119 -2 2121 132 3 3 chr18 17207362 17207657 -69469891 + AluSx SINE Alu 1 295 -17 322 251 231 39 chr18 17207697 17208052 -69469496 + L1MC4 LINE L1 6790 7212 -749 318 280 89 45 chr18 17208078 17208235 -69469313 + L1MC4 LINE L1 7310 7473 -569 1880 174 157 14 chr18 17208237 17208930 -69468618 - Charlie1a DNA MER1_type -1 1454 579 714 131 175 0 chr18 17208931 17209068 -69468480 - MER1B DNA MER1_type -1 338 178 525 169 0 0 chr18 17209055 17209144 -69468404 - MER1B DNA MER1_type -242 95 7 * 1753 208 80 29 chr18 17209145 17209601 -69467947 - Charlie1a DNA MER1_type -2175 586 102 2013 141 0 13 chr18 17209601 17209906 -69467642 + AluSx SINE Alu 1 301 -11 1753 208 80 29 chr18 17209906 17209934 -69467614 - Charlie1a DNA MER1_type -2659 102 77 1876 141 21 7 chr18 17210489 17210773 -69466775 - AluJb SINE Alu -24 288 1 1966 143 14 10 chr18 17212162 17212455 -69465093 + AluJo SINE Alu 5 298 -14 2434 35 3 0 chr18 17213145 17213476 -69464072 + AluY SINE Alu 1 332 0 23 101 0 0 chr18 17214002 17214081 -69463467 + AT_rich Low_complexity Low_complexity 1 79 0 1435 187 29 6 chr18 17214789 17215105 -69462443 - L1 LINE L1 -1068 5078 4756 469 374 75 3 chr18 17215107 17215489 -69462059 + L2 LINE L2 2702 3123 -190 1023 152 6 6 chr18 17215498 17215663 -69461885 - FRAM SINE Alu 0 166 2 1348 70 0 12 chr18 17215692 17215863 -69461685 + AluY SINE Alu 99 267 -44 349 288 248 56 chr18 17215981 17216537 -69461011 - L2 LINE L2 -710 2604 1942 254 234 0 117 chr18 17217069 17217146 -69460402 + L2 LINE L2 3246 3313 0 1157 163 28 28 chr18 17217193 17217408 -69460140 - MER20 DNA MER1_type -1 218 4 231 245 66 112 chr18 17217750 17217832 -69459716 - MIR SINE MIR -47 215 131 1680 183 16 13 chr18 17217832 17218143 -69459405 - AluJo SINE Alu 0 312 1 231 245 66 112 chr18 17218143 17218290 -69459258 - MIR SINE MIR -131 131 7 2143 110 3 3 chr18 17219423 17219714 -69457834 + AluSx SINE Alu 3 293 -19 1245 173 3 116 chr18 17220362 17220680 -69456868 - AluJb SINE Alu -30 282 1 1699 188 7 10 chr18 17221139 17221432 -69456116 + AluJb SINE Alu 1 292 -20 6987 49 8 7 chr18 17221445 17222755 -69454793 + L1PA5 LINE L1 4850 6154 0 1720 132 14 10 chr18 17222755 17223043 -69454505 + L1PA16 LINE L1 5775 6063 -103 472 164 133 8 chr18 17223038 17223166 -69454382 + L1MEc LINE L1 194 337 -6059 * 724 146 14 7 chr18 17223276 17223420 -69454128 - L1M4c LINE L1 -5654 730 586 234 146 0 0 chr18 17223419 17223460 -69454088 - L1M4c LINE L1 -6326 58 18 * 261 0 0 0 chr18 17223624 17223653 -69453895 + (T)n Simple_repeat Simple_repeat 1 29 0 339 345 44 20 chr18 17224378 17224581 -69452967 - L2 LINE L2 -181 3091 2884 791 230 125 35 chr18 17225357 17225726 -69451822 + Charlie4a DNA MER1_type 28 429 -79 2263 82 10 0 chr18 17225821 17226114 -69451434 + AluY SINE Alu 1 296 -15 2324 90 0 3 chr18 17226123 17226423 -69451125 + AluY SINE Alu 1 299 -12 315 0 0 0 chr18 17226451 17226486 -69451062 + (CA)n Simple_repeat Simple_repeat 2 36 0 1682 174 21 7 chr18 17226859 17227146 -69450402 + AluJb SINE Alu 1 291 -21 182 333 18 0 chr18 17227792 17227849 -69449699 - L2 LINE L2 -91 3222 3165 416 202 193 0 chr18 17228013 17228127 -69449421 - MIR SINE MIR -57 205 70 13045 128 51 13 chr18 17229607 17231910 -69445638 - Tigger1 DNA MER2_type 0 2418 28 262 206 10 29 chr18 17232192 17232294 -69445254 + T-rich Low_complexity Low_complexity 5 104 0 783 253 9 31 chr18 17234240 17234301 -69443247 + MER58A DNA MER1_type 1 62 -2358 2356 137 36 63 chr18 17234301 17234746 -69442802 - Tigger2a DNA MER2_type -1 433 1 783 253 9 31 chr18 17234746 17234913 -69442635 + MER58A DNA MER1_type 62 224 0 6384 222 107 19 chr18 17234913 17235331 -69442217 - L1ME1 LINE L1 -214 5952 5572 2121 117 3 22 chr18 17235331 17235647 -69441901 - AluSg SINE Alu 0 310 1 6384 222 107 19 chr18 17235647 17238173 -69439375 - L1ME1 LINE L1 -594 5572 2744 629 89 40 0 chr18 17238168 17238269 -69439279 - L1M LINE L1 -877 5426 5322 * 2214 97 0 3 chr18 17238269 17238558 -69438990 - AluSc SINE Alu -21 288 1 201 74 0 0 chr18 17238694 17238721 -69438827 + (A)n Simple_repeat Simple_repeat 1 27 0 860 113 0 0 chr18 17238721 17238836 -69438712 - AluJb SINE Alu -195 117 3 796 214 31 5 chr18 17238837 17239061 -69438487 - L1ME1 LINE L1 -3602 2544 2315 630 156 0 58 chr18 17239067 17239221 -69438327 - L1MB8 LINE L1 -5 6173 6029 476 227 0 0 chr18 17239222 17239319 -69438229 - AluJb SINE Alu -82 230 134 1537 243 93 60 chr18 17239479 17239841 -69437707 - L1ME3A LINE L1 -52 6118 5769 1446 161 154 0 chr18 17239841 17240139 -69437409 - MER2 DNA MER2_type 0 344 1 1537 243 93 60 chr18 17240139 17240231 -69437317 - L1ME3A LINE L1 -401 5769 5682 2176 132 0 0 chr18 17240231 17240542 -69437006 - AluSx SINE Alu -1 311 1 1537 243 93 60 chr18 17240542 17240749 -69436799 - L1ME3A LINE L1 -488 5682 5434 739 288 105 9 chr18 17240744 17241192 -69436356 - L1ME3A LINE L1 -1755 4391 3901 * 2927 130 33 28 chr18 17241193 17241803 -69435745 + MER4B LTR ERV1 1 779 0 241 302 93 0 chr18 17242226 17242312 -69435236 + L2 LINE L2 3178 3271 -42 22 0 0 0 chr18 17242411 17242433 -69435115 + AT_rich Low_complexity Low_complexity 1 22 0 9117 57 3 8 chr18 17242435 17244407 -69433141 - L1PA5 LINE L1 -17 6137 4171 1513 82 29 37 chr18 17246250 17246326 -69431222 + L1MA1 LINE L1 6060 6135 -167 2009 107 44 0 chr18 17246326 17246620 -69430928 + AluSx SINE Alu 1 306 0 1513 82 29 37 chr18 17246620 17246787 -69430761 + L1MA1 LINE L1 6135 6302 0 274 263 87 48 chr18 17247365 17247722 -69429826 + LTR16A1 LTR ERVL 86 456 -1 1424 153 38 83 chr18 17247830 17247901 -69429647 - Charlie5 DNA MER1_type -11 2613 2540 759 147 9 0 chr18 17247901 17248017 -69429531 + FLAM_C SINE Alu 1 117 -16 1424 153 38 83 chr18 17248017 17248344 -69429204 - Charlie5 DNA MER1_type -84 2540 2233 438 246 61 0 chr18 17248346 17248460 -69429088 - Charlie5 DNA MER1_type -2491 121 1 1049 160 0 10 chr18 17248567 17248767 -69428781 - MER96B DNA MER1_type? -219 198 1 2167 104 0 7 chr18 17250016 17250360 -69427188 + AluSq SINE Alu 1 313 0 433 220 56 4 chr18 17250495 17250608 -69426940 + MIR SINE MIR 51 164 -62 252 323 98 24 chr18 17250659 17250823 -69426725 - MER5A DNA MER1_type -6 183 8 1670 88 0 9 chr18 17251146 17251372 -69426176 - AluSq SINE Alu -16 297 74 841 210 12 0 chr18 17251719 17251881 -69425667 - FAM SINE Alu -11 164 1 727 176 23 0 chr18 17252189 17252320 -69425228 - AluJo SINE Alu -178 134 1 598 204 78 31 chr18 17252587 17252778 -69424770 + L1MCa LINE L1 162 361 -6203 1185 179 19 31 chr18 17252806 17253081 -69424467 - LTR26E LTR ERV1 0 622 269 292 193 48 0 chr18 17253081 17253164 -69424384 + L1MCa LINE L1 1089 1175 -4870 * 1797 126 3 0 chr18 17253162 17253447 -69424101 - L1PA16 LINE L1 -308 5858 5573 949 178 25 5 chr18 17253448 17253673 -69423875 + L1PA16 LINE L1 5869 6097 -66 342 69 0 17 chr18 17253643 17253701 -69423847 + L1PA13 LINE L1 6103 6159 -4 * 2326 176 45 40 chr18 17253679 17254086 -69423462 + L1MCa LINE L1 1157 1561 -5003 5686 60 23 3 chr18 17254086 17254833 -69422715 - MER4E LTR ERV1 0 766 5 245 75 25 0 chr18 17254833 17254873 -69422675 + (TA)n Simple_repeat Simple_repeat 1 41 0 2036 117 20 13 chr18 17254879 17255179 -69422369 - AluSx SINE Alu -10 302 1 2326 176 45 40 chr18 17255179 17255388 -69422160 + L1MCa LINE L1 1565 1784 -4780 1785 147 102 108 chr18 17255385 17255914 -69421634 + L1MC2 LINE L1 5683 6208 -136 * 2236 123 0 0 chr18 17255974 17256276 -69421272 + AluSx SINE Alu 1 302 -10 505 178 85 12 chr18 17256294 17256426 -69421122 + L1MC2 LINE L1 6209 7785 0 2076 80 36 28 chr18 17256675 17257193 -69420355 + MER4A LTR ERV1 1 610 0 4944 156 46 5 chr18 17257454 17258319 -69419229 - MER4D LTR ERV1 -2 901 1 330 231 54 31 chr18 17261931 17262061 -69415487 - L1ME4a LINE L1 -11 6110 5978 2254 114 3 0 chr18 17262496 17262795 -69414753 - AluSx SINE Alu -12 300 1 295 256 134 12 chr18 17262803 17262975 -69414573 - L1ME4a LINE L1 -297 5824 5632 1845 162 0 13 chr18 17263085 17263388 -69414160 - AluJo SINE Alu -13 299 1 2238 115 0 0 chr18 17263846 17264141 -69413407 - AluSx SINE Alu -17 295 1 357 264 32 16 chr18 17266152 17266277 -69411271 - MLT1K LTR MaLR -10 578 452 257 276 155 46 chr18 17266449 17266623 -69410925 - MLT1K LTR MaLR -277 311 119 237 65 0 0 chr18 17267195 17267226 -69410322 + (T)n Simple_repeat Simple_repeat 1 31 0 2774 29 3 0 chr18 17267421 17267731 -69409817 - AluY SINE Alu 0 311 1 352 251 172 60 chr18 17268709 17268924 -69408624 + MIR SINE MIR 14 252 -10 283 282 48 10 chr18 17269090 17269193 -69408355 + MIR SINE MIR 106 212 -50 445 139 0 0 chr18 17271368 17271440 -69406108 + AluJ/FRAM SINE Alu 228 299 -13 2456 223 29 23 chr18 17271440 17272172 -69405376 + L1M4 LINE L1 2536 3271 -2875 5615 223 37 16 chr18 17272174 17273692 -69403856 + L1M4 LINE L1 3059 4607 -1539 1545 140 32 4 chr18 17273705 17273984 -69403564 + L1MB7 LINE L1 5898 6184 0 513 88 0 0 chr18 17274103 17274183 -69403365 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 207 167 0 0 chr18 17274208 17274244 -69403304 - MIR SINE MIR -71 191 156 852 201 30 6 chr18 17274248 17274412 -69403136 - MER74A LTR ERVL -390 168 1 300 241 63 0 chr18 17274413 17274492 -69403056 + MLT1L LTR MaLR 531 614 -1 2208 146 6 3 chr18 17274499 17274841 -69402707 + MER2 DNA MER2_type 1 343 -1 2003 130 8 81 chr18 17274996 17275073 -69402475 + L1PA16 LINE L1 5721 5802 -364 4355 37 4 9 chr18 17275073 17275615 -69401933 + L1PA4 LINE L1 5617 6155 0 2003 130 8 81 chr18 17275615 17275907 -69401641 + L1PA16 LINE L1 5802 6063 -103 525 164 133 8 chr18 17275902 17276030 -69401518 + L1MEc LINE L1 194 337 -6059 * 765 137 7 14 chr18 17276140 17276286 -69401262 - L1M4c LINE L1 -5654 730 586 252 163 0 0 chr18 17276283 17276326 -69401222 - L1M4c LINE L1 -6324 60 18 * 398 274 102 6 chr18 17278970 17279127 -69398421 - MIR SINE MIR -2 260 89 1209 227 105 19 chr18 17279708 17280069 -69397479 - L1ME3A LINE L1 -133 6037 5646 1612 118 47 106 chr18 17280070 17280410 -69397138 + MSTB1 LTR MaLR 1 320 -112 3105 258 13 29 chr18 17280637 17281398 -69396150 + L1PA15 LINE L1 2 750 -6037 2074 129 0 4 chr18 17281522 17281802 -69395746 + AluSg SINE Alu 1 279 -31 248 197 0 15 chr18 17281819 17281885 -69395663 + GA-rich Low_complexity Low_complexity 4 68 0 360 361 69 4 chr18 17281897 17282214 -69395334 - L2 LINE L2 -218 3054 2702 2902 156 68 31 chr18 17282220 17282762 -69394786 + L1 LINE L1 4758 5327 -842 1737 129 0 31 chr18 17282762 17283056 -69394492 + AluSc SINE Alu 1 285 -24 2902 156 68 31 chr18 17283056 17283160 -69394388 + L1 LINE L1 5327 5426 -743 213 94 0 0 chr18 17283312 17283344 -69394204 + (A)n Simple_repeat Simple_repeat 1 32 0 16604 214 33 16 chr18 17283384 17285917 -69391631 + L1PA15 LINE L1 1652 4143 -2673 1982 73 27 100 chr18 17285917 17286246 -69391302 + AluYb8 SINE Alu 9 313 -5 16604 214 33 16 chr18 17286246 17288672 -69388876 + L1PA15 LINE L1 4143 6691 -125 338 153 14 56 chr18 17288689 17288761 -69388787 + LTR9 LTR ERV1 458 526 -86 811 110 37 7 chr18 17288774 17288910 -69388638 + L1PA15 LINE L1 6676 6815 -1 855 132 0 0 chr18 17288912 17289033 -69388515 + MSTB1 LTR MaLR 310 430 -2 783 238 130 68 chr18 17289034 17289513 -69388035 - L1ME LINE L1 -536 5634 5186 2155 107 6 31 chr18 17289513 17289832 -69387716 - AluY SINE Alu 0 311 1 783 238 130 68 chr18 17289832 17290255 -69387293 - L1ME LINE L1 -984 5186 4631 2162 204 7 26 chr18 17290489 17290910 -69386638 - MSTB LTR MaLR -6 420 8 6421 211 84 18 chr18 17290915 17291295 -69386253 - MSTB-int LTR MaLR 0 1580 1227 1754 156 58 33 chr18 17291295 17291660 -69385888 - THE1C LTR MaLR 0 375 2 6421 211 84 18 chr18 17291660 17292759 -69384789 - MSTB-int LTR MaLR -353 1227 3 2512 158 16 12 chr18 17292761 17293185 -69384363 - MSTB LTR MaLR 0 426 1 2179 113 10 3 chr18 17293395 17293687 -69383861 - AluSq SINE Alu -18 295 2 1563 210 0 13 chr18 17293939 17294239 -69383309 - AluJo SINE Alu -16 296 1 2431 68 0 39 chr18 17294344 17294672 -69382876 - AluY SINE Alu 0 316 1 1458 191 0 4 chr18 17295154 17295384 -69382164 - MER8 DNA MER2_type -10 229 1 43 20 0 0 chr18 17295621 17295671 -69381877 + AT_rich Low_complexity Low_complexity 1 50 0 2021 126 3 57 chr18 17295777 17296095 -69381453 + AluSg SINE Alu 1 301 -9 3958 46 0 12 chr18 17296096 17296576 -69380972 + L1PA8A LINE L1 5658 6131 0 6513 162 16 8 chr18 17296577 17298652 -69378896 + L1MA4 LINE L1 4181 6280 -20 333 0 0 0 chr18 17298708 17298745 -69378803 + (TG)n Simple_repeat Simple_repeat 2 38 0 841 115 15 0 chr18 17299650 17299780 -69377768 + FLAM_C SINE Alu 2 133 0 190 300 189 0 chr18 17301882 17301972 -69375576 + MIR SINE MIR 31 137 -71 611 165 0 0 chr18 17302086 17302189 -69375359 + AluSg/x SINE Alu 207 309 0 863 194 161 0 chr18 17304038 17304167 -69373381 + MER3 DNA MER1_type 1 108 -101 2408 82 0 13 chr18 17304167 17304470 -69373078 - AluY SINE Alu -12 299 1 209 56 0 28 chr18 17304477 17304513 -69373035 + (TTTAA)n Simple_repeat Simple_repeat 1 35 0 863 194 161 0 chr18 17304513 17304555 -69372993 + MER3 DNA MER1_type 113 209 0 511 229 124 52 chr18 17304555 17304710 -69372838 - MLT1J LTR MaLR -6 505 324 589 169 97 48 chr18 17304710 17304834 -69372714 - FLAM_A SINE Alu -3 130 1 511 229 124 52 chr18 17304834 17304927 -69372621 - MLT1J LTR MaLR -187 324 239 723 290 26 41 chr18 17304954 17305447 -69372101 - HAL1 LINE L1 -1185 1322 837 323 249 44 94 chr18 17305902 17306083 -69371465 - HAL1 LINE L1 -2299 208 37 1388 188 100 4 chr18 17306635 17306906 -69370642 + AluJb SINE Alu 3 299 -13 182 298 8 99 chr18 17306941 17306997 -69370551 - MIR SINE MIR -54 208 169 2264 105 6 10 chr18 17306997 17307311 -69370237 + AluSq SINE Alu 1 313 0 182 298 8 99 chr18 17307311 17307385 -69370163 - MIR SINE MIR -93 169 90 285 167 0 0 chr18 17307563 17307617 -69369931 + (TG)n Simple_repeat Simple_repeat 2 55 0 1017 292 22 18 chr18 17308404 17308762 -69368786 + L1MC/D LINE L1 5395 5751 -766 2861 125 109 27 chr18 17309195 17309682 -69367866 - MER1A DNA MER1_type 0 527 1 4351 18 0 6 chr18 17310102 17310602 -69366946 + L1HS LINE L1 5659 6155 0 2513 43 0 20 chr18 17311205 17311506 -69366042 - AluY SINE Alu -16 295 1 2420 99 0 0 chr18 17312182 17312485 -69365063 - AluSx SINE Alu -9 303 1 754 152 18 0 chr18 17314788 17314900 -69362648 + AluJo SINE Alu 79 192 -120 1775 172 17 0 chr18 17315037 17315333 -69362215 - AluJb SINE Alu -11 301 1 425 246 48 0 chr18 17315353 17315479 -69362069 - L1M4 LINE L1 -2196 3950 3819 30 59 0 0 chr18 17315570 17315621 -69361927 + AT_rich Low_complexity Low_complexity 1 51 0 2351 90 0 22 chr18 17316240 17316552 -69360996 + AluY SINE Alu 1 305 -6 337 219 91 109 chr18 17317053 17317159 -69360389 + MIR SINE MIR 50 152 -110 2394 82 3 0 chr18 17317159 17317453 -69360095 - AluY SINE Alu -16 295 1 337 219 91 109 chr18 17317453 17317556 -69359992 + MIR SINE MIR 152 255 -7 1982 168 6 12 chr18 17317576 17317921 -69359627 - MLT1A1 LTR MaLR -4 361 19 183 277 0 108 chr18 17318023 17318106 -69359442 + MIR SINE MIR 177 250 -12 2313 279 63 33 chr18 17318279 17318906 -69358642 + L1ME LINE L1 492 1098 -5442 1822 123 4 12 chr18 17318906 17319158 -69358390 + AluSx SINE Alu 47 296 -16 2313 279 63 33 chr18 17319158 17319826 -69357722 + L1ME LINE L1 1098 1820 -4720 743 302 60 16 chr18 17319849 17320167 -69357381 + L1ME LINE L1 511 842 -5698 1332 288 43 43 chr18 17320180 17320479 -69357069 + L1ME LINE L1 1872 2169 -4371 2329 95 0 0 chr18 17320479 17320809 -69356739 + AluY SINE Alu 1 311 0 1332 288 43 43 chr18 17320809 17321343 -69356205 + L1ME LINE L1 2169 2677 -3863 1722 148 3 23 chr18 17321343 17321647 -69355901 + AluSc SINE Alu 5 302 -7 1332 288 43 43 chr18 17321647 17321754 -69355794 + L1ME LINE L1 2677 2782 -3758 2294 101 0 10 chr18 17321843 17322151 -69355397 - AluSx SINE Alu 0 312 8 1447 282 60 24 chr18 17322155 17323093 -69354455 + L1MDa LINE L1 48 1102 -5438 2109 138 0 0 chr18 17323709 17324013 -69353535 + AluSx SINE Alu 1 304 -8 207 0 0 0 chr18 17324132 17324155 -69353393 + (TG)n Simple_repeat Simple_repeat 1 23 0 2721 137 70 9 chr18 17324753 17325213 -69352335 + L1PA16 LINE L1 5657 6144 -22 665 198 181 22 chr18 17325285 17325512 -69352036 + L1MD2 LINE L1 15 277 -6146 1510 154 89 4 chr18 17325540 17325820 -69351728 + AluJb SINE Alu 1 302 0 931 128 13 1 chr18 17325823 17325976 -69351572 + L1MA10 LINE L1 6006 6301 -2 408 256 218 0 chr18 17325980 17326136 -69351412 + L1MD2 LINE L1 266 455 -5968 1855 290 76 50 chr18 17326260 17327954 -69349594 + L1MD2 LINE L1 649 2602 -4520 * 2445 244 121 35 chr18 17327942 17328860 -69348688 + L1MD2 LINE L1 6106 7102 -52 192 97 0 0 chr18 17328860 17328891 -69348657 + (T)n Simple_repeat Simple_repeat 1 31 0 960 177 0 28 chr18 17329803 17329984 -69347564 - FRAM SINE Alu 0 40 1 367 310 106 32 chr18 17330251 17330712 -69346836 - L2 LINE L2 -667 2647 2153 353 250 57 0 chr18 17330722 17330810 -69346738 - MLT1G LTR MaLR -433 157 65 2310 54 18 7 chr18 17331179 17331457 -69346091 - AluY SINE Alu -14 297 17 202 222 19 19 chr18 17332425 17332479 -69345069 + (TG)n Simple_repeat Simple_repeat 1 54 0 7185 61 7 1 chr18 17332907 17334349 -69343199 - L1PA7 LINE L1 0 6154 4713 26 30 0 0 chr18 17334374 17334407 -69343141 + AT_rich Low_complexity Low_complexity 1 33 0 274 151 19 0 chr18 17334561 17334614 -69342934 + L1M4 LINE L1 2500 2553 -3593 1242 197 53 43 chr18 17334626 17334926 -69342622 - MLT1B LTR MaLR -9 381 79 186 43 0 0 chr18 17335034 17335057 -69342491 + (A)n Simple_repeat Simple_repeat 1 23 0 32022 107 18 54 chr18 17337000 17343384 -69334164 + L1PA7 LINE L1 12 6154 0 231 191 59 29 chr18 17344036 17344104 -69333444 - L1MEc LINE L1 -3571 2644 2575 4273 119 73 8 chr18 17344127 17344839 -69332709 - L1MA4 LINE L1 -9 6291 5534 723 193 7 0 chr18 17344839 17344989 -69332559 - L1MEc LINE L1 -3613 2602 2452 711 230 116 26 chr18 17344991 17345495 -69332053 - L1MEc LINE L1 -3709 2523 1987 24 0 0 0 chr18 17345593 17345617 -69331931 + AT_rich Low_complexity Low_complexity 1 24 0 1797 117 13 49 chr18 17345703 17346011 -69331537 + AluY SINE Alu 1 297 -14 353 250 57 0 chr18 17346380 17346468 -69331080 + MLT1G LTR MaLR 65 157 -433 367 310 106 32 chr18 17346478 17346939 -69330609 + L2 LINE L2 2153 2647 -667 996 193 0 0 chr18 17347206 17347382 -69330166 + FRAM SINE Alu 1 40 0 180 0 0 0 chr18 17350620 17350640 -69326908 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 206 152 0 22 chr18 17351804 17351850 -69325698 + GA-rich Low_complexity Low_complexity 2 46 0 273 235 68 30 chr18 17352644 17352776 -69324772 - L1ME4a LINE L1 -11 6110 5974 478 284 50 25 chr18 17352779 17353170 -69324378 - MLT1J2 LTR MaLR -2 448 6 987 231 154 19 chr18 17353486 17353811 -69323737 - MER93b LTR ERV1 0 373 5 838 167 0 0 chr18 17354012 17354138 -69323410 + FLAM_C SINE Alu 1 126 -17 754 252 56 0 chr18 17354159 17354373 -69323175 + MIR SINE MIR 20 245 -17 722 254 77 27 chr18 17354528 17354788 -69322760 + L1MC4a LINE L1 5763 6035 -1773 21 0 0 0 chr18 17354866 17354887 -69322661 + AT_rich Low_complexity Low_complexity 1 21 0 273 273 0 0 chr18 17355189 17355266 -69322282 - MIR SINE MIR -75 187 111 2014 182 35 16 chr18 17356494 17356929 -69320619 - L1MB7 LINE L1 0 6995 6553 1712 204 73 54 chr18 17356929 17357450 -69320098 + MER51C LTR ERV1 1 640 0 1730 218 77 0 chr18 17357450 17357868 -69319680 - L1MB7 LINE L1 -439 6556 6107 2452 216 90 110 chr18 17357905 17358314 -69319234 - L1MB7 LINE L1 -5189 1670 1254 1720 161 7 20 chr18 17358314 17358612 -69318936 - AluJo SINE Alu -12 300 7 2452 216 90 110 chr18 17358612 17359352 -69318196 - L1MB7 LINE L1 -5605 1254 544 829 210 103 4 chr18 17359515 17359805 -69317743 - MLT1E1 LTR MaLR -2 652 289 2037 206 168 42 chr18 17360053 17360869 -69316679 + LTR28 LTR ERV1 1 822 -4 253 319 50 34 chr18 17360984 17361103 -69316445 - MLT1E LTR MaLR -292 301 181 891 181 0 19 chr18 17361149 17361309 -69316239 - AluJo SINE Alu -155 157 1 555 191 259 7 chr18 17361309 17361456 -69316092 - MLT1E LTR MaLR -409 184 1 519 200 110 39 chr18 17361457 17361612 -69315936 + MIR SINE MIR 97 262 0 468 0 0 0 chr18 17363383 17363435 -69314113 + (CA)n Simple_repeat Simple_repeat 2 53 0 360 59 0 0 chr18 17363435 17363486 -69314062 + (TC)n Simple_repeat Simple_repeat 2 52 0 525 113 0 12 chr18 17364104 17364184 -69313364 - MADE1 DNA Mariner -1 79 1 2881 139 29 4 chr18 17365551 17366032 -69311516 + L1PB4 LINE L1 5658 6150 -6 290 333 36 18 chr18 17366800 17366911 -69310637 - MER81 DNA DNA 0 114 2 1036 255 101 25 chr18 17367298 17367781 -69309767 + MLT2B1 LTR ERVL 1 520 0 420 235 0 12 chr18 17368903 17368988 -69308560 - AluJ/FLAM SINE Alu -227 85 2 27 29 0 0 chr18 17369495 17369529 -69308019 + AT_rich Low_complexity Low_complexity 1 34 0 327 302 26 86 chr18 17369558 17369790 -69307758 - MIR SINE MIR -13 249 32 476 252 63 0 chr18 17370723 17370866 -69306682 - LTR16B LTR ERVL -112 352 201 1003 306 48 8 chr18 17371066 17371422 -69306126 - L1MC4a LINE L1 -1979 5829 5460 320 235 37 0 chr18 17372452 17372533 -69305015 - MLT2B1 LTR ERVL -436 84 1 446 0 19 0 chr18 17372612 17372666 -69304882 + (CA)n Simple_repeat Simple_repeat 2 56 0 776 165 8 8 chr18 17372666 17372793 -69304755 - AluJb SINE Alu -45 267 141 336 83 0 0 chr18 17373935 17373983 -69303565 + (TG)n Simple_repeat Simple_repeat 1 48 0 229 313 23 47 chr18 17374267 17374395 -69303153 + MIR SINE MIR 138 262 0 25 31 0 0 chr18 17376371 17376403 -69301145 + AT_rich Low_complexity Low_complexity 1 32 0 302 348 6 0 chr18 17376563 17376724 -69300824 + L1ME4a LINE L1 5657 5818 -303 22404 181 99 10 chr18 17376750 17383635 -69293913 + L1MA1 LINE L1 11 7557 -164 2061 98 0 26 chr18 17383900 17384207 -69293341 + AluY SINE Alu 1 299 -12 7422 162 22 8 chr18 17384209 17384377 -69293171 + L1MA4 LINE L1 3993 4157 -2143 7031 42 6 29 chr18 17384377 17385094 -69292454 + L1PA8A LINE L1 4697 5429 -702 1572 95 0 0 chr18 17385094 17385304 -69292244 + AluSc SINE Alu 82 291 -18 7031 42 6 29 chr18 17385304 17385583 -69291965 + L1PA8A LINE L1 5429 5713 -418 2050 110 0 57 chr18 17385583 17385901 -69291647 + AluSc SINE Alu 1 300 -9 7031 42 6 29 chr18 17385901 17386382 -69291166 + L1PA8A LINE L1 5713 6131 0 7422 162 22 8 chr18 17386382 17388458 -69289090 + L1MA4 LINE L1 4157 6280 -20 333 0 0 0 chr18 17388514 17388551 -69288997 + (TG)n Simple_repeat Simple_repeat 2 38 0 239 222 19 0 chr18 17388581 17388635 -69288913 + L1ME4a LINE L1 5986 6040 -81 * 5829 176 20 14 chr18 17388630 17389727 -69287821 - L1MC3 LINE L1 -1 7784 6681 1844 234 25 42 chr18 17389725 17390337 -69287211 - L1M4 LINE L1 -985 5161 4561 * 392 217 23 85 chr18 17392038 17392167 -69285381 - MIR SINE MIR -63 199 79 257 205 0 26 chr18 17394406 17394484 -69283064 + (TATG)n Simple_repeat Simple_repeat 3 78 0 261 248 0 64 chr18 17397340 17397449 -69280099 + GA-rich Low_complexity Low_complexity 4 105 0 301 246 68 51 chr18 17397577 17397695 -69279853 - MIR SINE MIR -24 238 119 220 261 185 0 chr18 17397714 17397806 -69279742 - L2 LINE L2 -518 2796 2688 279 289 10 10 chr18 17397840 17397937 -69279611 - L2 LINE L2 -1445 1869 1773 1414 186 46 49 chr18 17397950 17398107 -69279441 - L1MA9 LINE L1 -30 6282 6126 1882 132 3 10 chr18 17398107 17398436 -69279112 - AluSx SINE Alu 0 312 1 1414 186 46 49 chr18 17398436 17398648 -69278900 - L1MA9 LINE L1 -186 6126 5914 188 297 209 13 chr18 17398801 17399040 -69278508 - L2 LINE L2 -1642 1672 1387 1664 183 3 0 chr18 17399787 17400082 -69277466 - AluJb SINE Alu -16 296 1 366 328 55 0 chr18 17400198 17400326 -69277222 - L2 LINE L2 -2 3270 3136 432 245 105 56 chr18 17400618 17400761 -69276787 + MIR SINE MIR 12 161 -101 628 235 104 94 chr18 17400763 17400819 -69276729 + MLT1I LTR MaLR 1 55 -354 2327 74 0 0 chr18 17400819 17401118 -69276430 - AluY SINE Alu -10 301 3 628 235 104 94 chr18 17401118 17401472 -69276076 + MLT1I LTR MaLR 55 409 0 338 161 36 0 chr18 17401489 17401545 -69276003 + MIR SINE MIR 184 241 -21 234 250 54 65 chr18 17402089 17402181 -69275367 - MIR3 SINE MIR -23 185 95 353 265 59 10 chr18 17402415 17402517 -69275031 - LTR33 LTR ERVL -5 516 410 505 242 83 0 chr18 17402626 17402783 -69274765 - LTR33 LTR ERVL -350 171 2 1356 195 227 5 chr18 17402783 17403189 -69274359 + LTR54B LTR ERV1 1 496 -2 309 333 9 9 chr18 17403855 17403969 -69273579 - MIR3 SINE MIR -9 199 86 956 221 90 27 chr18 17404922 17405221 -69272327 + Charlie2 DNA MER1_type 2545 2862 0 2136 130 0 3 chr18 17406964 17407264 -69270284 + AluSc SINE Alu 1 299 -10 230 137 20 78 chr18 17407435 17407450 -69270098 + Alu SINE Alu 120 131 -172 2177 103 10 13 chr18 17407450 17407760 -69269788 + AluSg1 SINE Alu 1 309 0 1748 90 26 0 chr18 17407794 17408066 -69269482 + L1PA10 LINE L1 5911 6188 0 702 125 10 0 chr18 17408601 17408705 -69268843 + THE1C LTR MaLR 271 375 0 948 269 100 28 chr18 17409674 17410128 -69267420 + MLT1G1 LTR MaLR 55 587 -6 265 296 0 70 chr18 17412847 17412907 -69264641 + MER5B DNA MER1_type 1 51 -127 2368 92 10 0 chr18 17412907 17413202 -69264346 + AluSg SINE Alu 1 298 -12 265 296 0 70 chr18 17413202 17413256 -69264292 + MER5B DNA MER1_type 51 107 -71 1126 277 75 39 chr18 17414315 17414852 -69262696 + MLT1F1 LTR MaLR 3 567 0 245 340 0 21 chr18 17414970 17415067 -69262481 + MIR SINE MIR 71 165 -97 296 156 0 0 chr18 17415248 17415293 -69262255 - MER116 DNA Mariner 0 80 36 314 335 24 59 chr18 17415424 17415594 -69261954 + L2 LINE L2 2986 3149 -123 436 161 0 43 chr18 17415736 17415829 -69261719 - AluJ/FRAM SINE Alu -3 309 221 211 272 238 27 chr18 17417238 17417385 -69260163 + MER5B DNA MER1_type 1 178 0 401 304 121 12 chr18 17417525 17417857 -69259691 - HAL1 LINE L1 -110 2397 2030 970 290 175 21 chr18 17417950 17418560 -69258988 - HAL1 LINE L1 -620 1887 1184 229 148 115 0 chr18 17418601 17418662 -69258886 - MSTB1 LTR MaLR -85 347 280 203 0 37 0 chr18 17419308 17419335 -69258213 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2286 97 0 0 chr18 17419410 17419699 -69257849 - AluY SINE Alu -22 289 1 1960 121 14 0 chr18 17419828 17420142 -69257406 - AluSx SINE Alu 0 318 1 2549 62 0 3 chr18 17420739 17421048 -69256500 - AluY SINE Alu -3 308 1 187 327 93 19 chr18 17421082 17421244 -69256304 - MIR3 SINE MIR -2 206 33 1660 107 63 80 chr18 17421922 17422222 -69255326 - AluSq SINE Alu -18 295 1 882 252 9 0 chr18 17422928 17423142 -69254406 + L1M4 LINE L1 2346 2561 -3585 2293 138 37 22 chr18 17423142 17423548 -69254000 + L1MB3 LINE L1 5770 6181 -2 22 0 0 0 chr18 17423590 17423612 -69253936 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 17423754 17423778 -69253770 + AT_rich Low_complexity Low_complexity 1 24 0 833 287 17 11 chr18 17423831 17424116 -69253432 + L1ME LINE L1 5318 5604 -592 240 286 14 0 chr18 17424447 17424517 -69253031 + L3 LINE CR1 881 951 -626 591 307 46 0 chr18 17424624 17424840 -69252708 + L1ME LINE L1 5598 5822 -344 1967 207 16 22 chr18 17424997 17425077 -69252471 + MLT1A1 LTR MaLR 1 80 -285 2342 77 0 32 chr18 17425077 17425390 -69252158 + AluY SINE Alu 1 303 -8 1967 207 16 22 chr18 17425390 17425676 -69251872 + MLT1A1 LTR MaLR 80 365 0 253 154 13 39 chr18 17425776 17425854 -69251694 + (TTA)n Simple_repeat Simple_repeat 2 77 0 254 318 31 70 chr18 17425929 17426058 -69251490 - MIR SINE MIR -68 140 17 225 290 32 32 chr18 17426217 17426310 -69251238 + L2 LINE L2 2766 2858 -456 923 61 24 24 chr18 17426320 17426484 -69251064 + (TTTC)n Simple_repeat Simple_repeat 4 167 0 234 91 0 0 chr18 17426484 17426517 -69251031 + (TCCC)n Simple_repeat Simple_repeat 3 35 0 434 302 66 40 chr18 17426524 17426559 -69250989 + L2 LINE L2 2828 2861 -452 2012 132 17 3 chr18 17426559 17426848 -69250700 - AluSc SINE Alu -16 293 1 434 302 66 40 chr18 17426848 17427113 -69250435 + L2 LINE L2 2861 3136 -177 2252 117 0 0 chr18 17427707 17428006 -69249542 - AluSx SINE Alu -13 299 1 21 57 0 0 chr18 17428012 17428047 -69249501 + AT_rich Low_complexity Low_complexity 1 35 0 5519 241 102 32 chr18 17428438 17430253 -69247295 - L1ME1 LINE L1 -113 6122 4436 249 108 0 0 chr18 17430253 17430290 -69247258 + (TATG)n Simple_repeat Simple_repeat 4 40 0 5519 241 102 32 chr18 17430290 17430597 -69246951 - L1ME1 LINE L1 -1799 4436 4152 2001 100 43 4 chr18 17430597 17430878 -69246670 - AluSg SINE Alu -18 292 1 5519 241 102 32 chr18 17430878 17431582 -69245966 - L1ME1 LINE L1 -2083 4152 3094 2188 177 47 0 chr18 17431583 17431967 -69245581 + Tigger1 DNA MER2_type 1 402 -2016 1117 281 11 30 chr18 17431974 17432437 -69245111 - L1ME1 LINE L1 -4680 1716 1263 830 281 22 0 chr18 17432469 17432693 -69244855 - LTR40c LTR ERVL -230 235 7 3860 279 61 31 chr18 17432745 17434013 -69243535 - HERVL40 LTR ERVL -492 5038 3733 213 154 0 0 chr18 17434118 17434157 -69243391 + CT-rich Low_complexity Low_complexity 2 40 0 822 205 12 12 chr18 17434701 17434867 -69242681 + L1PA13 LINE L1 1292 1457 -5330 13269 209 35 23 chr18 17434872 17436730 -69240818 + L1PA13 LINE L1 2434 4347 -2450 399 21 0 0 chr18 17436730 17436778 -69240770 + (CAAAA)n Simple_repeat Simple_repeat 5 52 0 13269 209 35 23 chr18 17436778 17438028 -69239520 + L1PA13 LINE L1 4347 5580 -1217 1376 283 67 58 chr18 17438053 17439007 -69238541 + L1MB8 LINE L1 755 1716 -4668 307 232 22 101 chr18 17439085 17439223 -69238325 + L1MB8 LINE L1 1533 1659 -4723 690 196 81 51 chr18 17439232 17439448 -69238100 - LTR41 LTR ERVL 0 795 553 242 265 15 0 chr18 17439448 17439516 -69238032 - L1M4 LINE L1 -283 5901 5833 342 209 3 12 chr18 17439529 17439638 -69237910 + L1MB8 LINE L1 1577 1651 -4733 1026 195 5 0 chr18 17439638 17439828 -69237720 - L1MB5 LINE L1 -348 5826 5636 1567 192 258 12 chr18 17439828 17440324 -69237224 - L1MCa LINE L1 -4764 1662 1035 2084 67 19 7 chr18 17440324 17440617 -69236931 - AluY SINE Alu 0 311 17 1567 192 258 12 chr18 17440617 17440631 -69236917 - L1MCa LINE L1 -5391 1035 1026 202 222 19 19 chr18 17441585 17441639 -69235909 + (TG)n Simple_repeat Simple_repeat 1 54 0 7516 61 7 1 chr18 17442067 17443509 -69234039 - L1PA7 LINE L1 0 6154 4713 26 30 0 0 chr18 17443534 17443567 -69233981 + AT_rich Low_complexity Low_complexity 1 33 0 276 151 19 0 chr18 17443721 17443774 -69233774 + L1MB8 LINE L1 2736 2789 -3593 1624 202 71 33 chr18 17443786 17444153 -69233395 - MLT1B LTR MaLR -9 381 1 393 227 118 0 chr18 17444159 17444269 -69233279 + L1MB8 LINE L1 2794 2916 -3466 741 264 57 3 chr18 17444270 17444569 -69232979 + L1MB8 LINE L1 3230 3544 -2838 6004 153 23 32 chr18 17444575 17445050 -69232498 + L1MA9 LINE L1 5164 5642 -670 2401 130 13 24 chr18 17445050 17445427 -69232121 - THE1C LTR MaLR -2 373 1 6004 153 23 32 chr18 17445427 17446106 -69231442 + L1MA9 LINE L1 5642 6312 0 6666 194 40 26 chr18 17446110 17446756 -69230792 + L1MB8 LINE L1 3975 4610 -1804 2174 125 0 3 chr18 17446756 17447067 -69230481 + AluSg SINE Alu 1 310 0 6666 194 40 26 chr18 17447067 17447078 -69230470 + L1MB8 LINE L1 4610 4619 -1795 1967 96 13 32 chr18 17447078 17447392 -69230156 + AluY SINE Alu 1 308 -3 6666 194 40 26 chr18 17447392 17448597 -69228951 + L1MB8 LINE L1 4619 5855 -559 2011 163 12 6 chr18 17448599 17448937 -69228611 - MLT1A1 LTR MaLR -3 362 23 2170 172 78 23 chr18 17448982 17449459 -69228089 + L1MB8 LINE L1 5884 6386 -28 2521 65 0 0 chr18 17450237 17450546 -69227002 + AluY SINE Alu 1 309 -2 214 283 61 20 chr18 17452275 17452374 -69225174 + L3 LINE CR1 1177 1279 -298 202 308 83 41 chr18 17452525 17452694 -69224854 + MIR SINE MIR 14 189 -73 643 202 173 69 chr18 17452771 17453117 -69224431 + MLT1D LTR MaLR 1 382 -123 817 233 102 0 chr18 17453887 17454102 -69223446 - MLT1F1 LTR MaLR 0 567 331 233 146 21 0 chr18 17454172 17454220 -69223328 + GA-rich Low_complexity Low_complexity 1 49 0 1891 173 57 22 chr18 17454624 17454995 -69222553 + MLT1B LTR MaLR 7 390 0 204 40 0 0 chr18 17455470 17455495 -69222053 + (TCC)n Simple_repeat Simple_repeat 3 27 0 210 128 0 0 chr18 17455622 17455661 -69221887 + (T)n Simple_repeat Simple_repeat 1 39 0 41084 29 17 1 chr18 17455665 17461698 -69215850 - L1HS LINE L1 -2 6153 1 189 107 0 0 chr18 17461698 17461726 -69215822 + (T)n Simple_repeat Simple_repeat 1 28 0 181 263 163 12 chr18 17462554 17462634 -69214914 - L2 LINE L2 0 3313 3222 272 218 18 0 chr18 17463286 17463341 -69214207 - MER94 DNA DNA -78 56 1 327 294 91 50 chr18 17464354 17464575 -69212973 + L2 LINE L2 2082 2311 -1003 783 240 45 45 chr18 17464601 17464744 -69212804 - MIR SINE MIR -40 222 77 6460 181 4 34 chr18 17464744 17466782 -69210766 + L1PA15 LINE L1 4150 6160 -5 783 240 45 45 chr18 17466782 17466859 -69210689 - MIR SINE MIR -184 78 2 609 355 113 10 chr18 17466980 17467290 -69210258 + MER115 DNA AcHobo 74 415 -278 1094 202 270 8 chr18 17467302 17467850 -69209698 + LTR50 LTR ERVL 11 793 -2 21 36 0 0 chr18 17468756 17468784 -69208764 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr18 17468805 17468841 -69208707 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr18 17469049 17469074 -69208474 + AT_rich Low_complexity Low_complexity 1 25 0 394 202 75 0 chr18 17469256 17469350 -69208198 - L1 LINE L1 -2491 3655 3555 5135 150 56 42 chr18 17469350 17470344 -69207204 + L1MA8 LINE L1 4327 5306 -985 3127 110 24 2 chr18 17470344 17470763 -69206785 + MSTA LTR MaLR 1 428 0 5135 150 56 42 chr18 17470763 17471703 -69205845 + L1MA8 LINE L1 5306 6290 -1 27 49 0 0 chr18 17471727 17471768 -69205780 + AT_rich Low_complexity Low_complexity 1 41 0 526 335 24 14 chr18 17472113 17472322 -69205226 + MIR SINE MIR 38 248 -14 1655 159 115 16 chr18 17472920 17473234 -69204314 - MER2 DNA MER2_type 0 345 1 226 281 0 31 chr18 17473767 17473831 -69203717 + L1M3c LINE L1 1 62 -6079 310 203 40 0 chr18 17473992 17474066 -69203482 + L1M4 LINE L1 48 124 -6418 2159 105 0 11 chr18 17476710 17477029 -69200519 - AluSx SINE Alu 0 316 1 23 0 0 0 chr18 17477043 17477066 -69200482 + AT_rich Low_complexity Low_complexity 1 23 0 1003 320 61 11 chr18 17477227 17477748 -69199800 - L2 LINE L2 -32 3281 2741 598 328 30 4 chr18 17477744 17477979 -69199569 + L2 LINE L2 3041 3281 -32 * 1950 64 29 6 chr18 17478039 17478305 -69199243 + THE1A LTR MaLR 105 355 0 259 264 112 24 chr18 17480453 17480578 -69196970 + MLT1K LTR MaLR 156 291 -297 833 226 8 75 chr18 17481099 17481364 -69196184 - L1MC4 LINE L1 -1071 6971 6725 48 60 0 0 chr18 17482081 17482164 -69195384 + AT_rich Low_complexity Low_complexity 1 83 0 451 113 0 0 chr18 17482200 17482262 -69195286 - Alu SINE Alu -13 296 235 35841 57 4 3 chr18 17482262 17486753 -69190795 - L1P LINE L1 -1639 4507 11 812 171 8 0 chr18 17486794 17486917 -69190631 + FLAM_C SINE Alu 2 125 -18 333 334 87 42 chr18 17487576 17487911 -69189637 - L1ME3A LINE L1 -27 6143 5794 6131 112 13 30 chr18 17487935 17488771 -69188777 - L1PA16 LINE L1 -11 6155 5341 1576 172 28 21 chr18 17488771 17489061 -69188487 - AluJo SINE Alu -20 292 1 6131 112 13 30 chr18 17489061 17489762 -69187786 - L1PA16 LINE L1 -825 5341 4629 6560 77 13 41 chr18 17489763 17490744 -69186804 - SVA Other Other 0 1386 433 5886 65 20 61 chr18 17490811 17491714 -69185834 - SVA Other Other -520 866 1 859 181 18 0 chr18 17491749 17491920 -69185628 - L1 LINE L1 -1510 4636 4463 231 288 55 0 chr18 17491930 17492003 -69185545 - L1ME3A LINE L1 -373 5789 5713 594 273 116 34 chr18 17492096 17492825 -69184723 - L1ME3A LINE L1 -606 5556 4752 2397 156 15 7 chr18 17493393 17493796 -69183752 - L1MC1 LINE L1 -1 6332 5927 2616 124 23 5 chr18 17493801 17494197 -69183351 - Tigger1 DNA MER2_type 0 2418 2016 1123 195 144 57 chr18 17496334 17496667 -69180881 - MLT1A1 LTR MaLR -3 362 1 1647 128 78 43 chr18 17497030 17497312 -69180236 + AluJo SINE Alu 13 304 -8 347 233 94 56 chr18 17497477 17497657 -69179891 - L1ME4a LINE L1 0 6121 5935 2547 58 0 0 chr18 17497692 17497987 -69179561 + AluY SINE Alu 1 295 -16 238 224 69 0 chr18 17500207 17500265 -69177283 - L2 LINE L2 -15 3257 3196 26 30 0 0 chr18 17500834 17500867 -69176681 + AT_rich Low_complexity Low_complexity 1 33 0 225 189 0 0 chr18 17501616 17501653 -69175895 - MIR SINE MIR -7 255 219 283 314 12 0 chr18 17503174 17503260 -69174288 - MLT1L LTR MaLR -92 523 437 361 293 8 32 chr18 17503672 17503774 -69173774 - MER5B DNA MER1_type -27 151 51 216 0 0 0 chr18 17503774 17503798 -69173750 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 361 293 8 32 chr18 17503798 17503818 -69173730 - MER5B DNA MER1_type -127 51 32 1197 268 88 40 chr18 17507180 17507601 -69169947 + MLT1J LTR MaLR 28 468 -43 8470 156 30 22 chr18 17508194 17509855 -69167693 + L1M4c LINE L1 7 1681 -4703 461 206 105 67 chr18 17509857 17510066 -69167482 + MER21B LTR ERV1 632 848 -15 403 260 29 10 chr18 17510555 17510659 -69166889 - L2 LINE L2 -2 3311 3206 1080 179 55 119 chr18 17510711 17511181 -69166367 - LTR8A LTR ERV1 0 727 288 1405 221 14 32 chr18 17511903 17512408 -69165140 - LTR24-int LTR ERV1 -4471 652 17 884 141 27 137 chr18 17512424 17512686 -69164862 - LTR24 LTR ERV1 0 467 235 2167 143 19 5 chr18 17512686 17513065 -69164483 - LTR45 LTR ERV1 -1 524 141 3947 210 28 8 chr18 17514088 17514925 -69162623 + L1PA13 LINE L1 1 853 -5934 21 0 0 0 chr18 17515157 17515178 -69162370 + AT_rich Low_complexity Low_complexity 1 21 0 220 343 87 39 chr18 17515742 17515949 -69161599 + L2 LINE L2 3097 3313 0 1397 258 82 2 chr18 17516397 17516846 -69160702 - MER110 LTR ERV1 -6 485 1 38774 66 8 2 chr18 17517404 17523525 -69154023 - L1PA5 LINE L1 -3 6151 5 500 307 74 31 chr18 17523525 17523851 -69153697 - MER110-int LTR ERV1 -468 4179 3840 993 265 60 41 chr18 17523900 17524386 -69153162 - MER110-int LTR ERV1 -889 3758 3264 2355 69 31 0 chr18 17524408 17524697 -69152851 - AluY SINE Alu -13 298 1 436 190 13 0 chr18 17524889 17524968 -69152580 + MLT1D LTR MaLR 1 80 -425 1811 254 45 29 chr18 17525032 17525873 -69151675 - L1MEc LINE L1 -2329 4628 3774 5147 149 14 9 chr18 17525878 17527202 -69150346 - L1PA16 LINE L1 -5 6161 4829 1224 122 75 23 chr18 17527202 17527416 -69150132 - THE1B LTR MaLR -139 225 1 1274 187 44 3 chr18 17527416 17527710 -69149838 - L1 LINE L1 -1369 4777 4472 1157 256 7 10 chr18 17527717 17528135 -69149413 - L1MEc LINE L1 -3182 3775 3359 2277 98 38 0 chr18 17528197 17528543 -69149005 - L1PA14 LINE L1 -86 6075 5717 1061 276 78 18 chr18 17528548 17529272 -69148276 - L1MEc LINE L1 -3603 3354 2627 1955 168 0 23 chr18 17529311 17529656 -69147892 - MER1B DNA MER1_type 0 337 1 4268 270 24 50 chr18 17529975 17531512 -69146036 - L1MEc LINE L1 -5352 1507 11 22 70 0 0 chr18 17532222 17532265 -69145283 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr18 17532744 17532773 -69144775 + AT_rich Low_complexity Low_complexity 1 29 0 885 283 72 12 chr18 17532855 17533286 -69144262 - L1M3c LINE L1 -4770 1371 915 945 257 64 20 chr18 17534752 17535209 -69142339 - L1MC/D LINE L1 -650 5592 5114 292 259 61 57 chr18 17535882 17536144 -69141404 + L1ME2 LINE L1 5875 6137 -27 23 54 0 0 chr18 17537662 17537699 -69139849 + AT_rich Low_complexity Low_complexity 1 37 0 31 44 0 0 chr18 17537729 17537774 -69139774 + AT_rich Low_complexity Low_complexity 1 45 0 8269 185 26 12 chr18 17537774 17540481 -69137067 - L1PA16 LINE L1 -89 6077 3327 672 282 8 0 chr18 17540474 17540715 -69136833 - L1MC/D LINE L1 -3319 2827 2585 * 1742 210 38 13 chr18 17540813 17541053 -69136495 - L1P LINE L1 -3505 2641 2408 2435 87 3 6 chr18 17541053 17541365 -69136183 - AluY SINE Alu 0 311 1 1742 210 38 13 chr18 17541365 17541660 -69135888 - L1P LINE L1 -3738 2408 2087 1985 211 15 47 chr18 17541670 17542206 -69135342 + MER67B LTR ERV1 131 649 -12 185 266 0 13 chr18 17542218 17542297 -69135251 + (CATATA)n Simple_repeat Simple_repeat 4 81 0 321 306 16 8 chr18 17542332 17542453 -69135095 - HAL1 LINE L1 -1616 891 770 192 269 15 60 chr18 17542944 17543011 -69134537 - MIR SINE MIR -31 231 168 186 43 0 0 chr18 17544109 17544132 -69133416 + (CA)n Simple_repeat Simple_repeat 2 24 0 39830 58 6 1 chr18 17544793 17550907 -69126641 + L1PA5 LINE L1 3 6148 -6 22 0 0 0 chr18 17550907 17550929 -69126619 + AT_rich Low_complexity Low_complexity 1 22 0 2193 117 0 0 chr18 17553039 17553377 -69124171 - AluSx SINE Alu 0 338 1 3109 66 21 0 chr18 17554272 17554696 -69122852 - THE1B-int LTR MaLR -1147 433 1 1968 137 71 31 chr18 17554696 17555046 -69122502 - THE1B LTR MaLR 0 364 1 274 291 0 47 chr18 17555787 17555873 -69121675 - MIR SINE MIR -82 180 99 23 0 0 0 chr18 17556363 17556386 -69121162 + AT_rich Low_complexity Low_complexity 1 23 0 2165 122 0 45 chr18 17557728 17558081 -69119467 - MER1B DNA MER1_type 0 337 1 234 294 11 0 chr18 17558508 17558600 -69118948 + L1MC1 LINE L1 3786 3878 -2268 4705 216 42 11 chr18 17559068 17560122 -69117426 + L1MC1 LINE L1 4488 5508 -825 2550 72 0 0 chr18 17560122 17560426 -69117122 - AluSc SINE Alu -5 304 1 4705 216 42 11 chr18 17560426 17561065 -69116483 + L1MC1 LINE L1 5508 6247 -86 2345 140 39 25 chr18 17561065 17561502 -69116046 - MER65A LTR ERV1 0 445 3 4705 216 42 11 chr18 17561502 17561591 -69115957 + L1MC1 LINE L1 6247 6332 -1 21 0 0 0 chr18 17561614 17561635 -69115913 + AT_rich Low_complexity Low_complexity 1 21 0 28 71 0 0 chr18 17561759 17561815 -69115733 + AT_rich Low_complexity Low_complexity 1 56 0 22 0 0 0 chr18 17561847 17561869 -69115679 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr18 17562429 17562459 -69115089 + AT_rich Low_complexity Low_complexity 1 30 0 1200 161 92 82 chr18 17562487 17562779 -69114769 - AluJo SINE Alu -17 295 1 2020 139 0 0 chr18 17562874 17563193 -69114355 + AluSx SINE Alu 1 319 0 467 198 12 0 chr18 17563434 17563520 -69114028 + AluS SINE Alu 1 87 -225 1125 284 65 43 chr18 17565250 17566270 -69111278 + L1M1 LINE L1 12 1041 -6524 243 313 113 0 chr18 17566274 17566424 -69111124 + L1 LINE L1 652 818 -6671 242 255 0 0 chr18 17566562 17566613 -69110935 + L1 LINE L1 1884 1934 -4631 308 174 42 55 chr18 17566615 17566730 -69110818 + L1 LINE L1 2314 2434 -4131 * 1136 189 28 2 chr18 17566713 17567176 -69110372 + L1 LINE L1 5076 5590 -1975 26 30 0 0 chr18 17567198 17567231 -69110317 + AT_rich Low_complexity Low_complexity 1 33 0 288 266 68 47 chr18 17569299 17569491 -69108057 + L1ME2 LINE L1 5873 6068 -96 30 27 0 0 chr18 17569541 17569578 -69107970 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr18 17570997 17571029 -69106519 + AT_rich Low_complexity Low_complexity 1 32 0 324 301 172 45 chr18 17571373 17572283 -69105265 - L2 LINE L2 -51 3262 2224 495 167 0 0 chr18 17572540 17572624 -69104924 + MER67A LTR ERV1 1 84 -459 2039 205 86 31 chr18 17572664 17573249 -69104299 + MER67B LTR ERV1 45 661 0 234 143 14 43 chr18 17573253 17573323 -69104225 + (CATATA)n Simple_repeat Simple_repeat 4 71 0 1739 177 22 64 chr18 17573354 17573761 -69103787 - MER57A LTR ERV1 0 403 14 298 289 58 36 chr18 17573773 17573998 -69103550 - HAL1 LINE L1 -1509 998 769 1894 216 35 6 chr18 17574089 17574574 -69102974 - L1 LINE L1 -1990 5575 5077 1001 208 63 9 chr18 17574571 17574903 -69102645 - L1 LINE L1 -4139 2552 2097 * 310 302 43 0 chr18 17575087 17575226 -69102322 - L1 LINE L1 -6683 806 662 1305 269 65 37 chr18 17575452 17576248 -69101300 - L1 LINE L1 -6646 843 13 993 193 0 0 chr18 17576322 17576488 -69101060 - FRAM SINE Alu -12 164 1 2100 124 3 3 chr18 17577968 17578266 -69099282 - AluSx SINE Alu -14 298 1 2397 219 133 24 chr18 17579786 17580664 -69096884 + L1MD2 LINE L1 5254 6227 -132 424 269 57 36 chr18 17580721 17580914 -69096634 - MIR SINE MIR -3 259 63 198 103 0 0 chr18 17581919 17581948 -69095600 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 1989 143 0 3 chr18 17581988 17582275 -69095273 - AluSx SINE Alu -26 286 1 24 0 0 0 chr18 17582452 17582476 -69095072 + AT_rich Low_complexity Low_complexity 1 24 0 874 243 106 29 chr18 17582921 17583411 -69094137 + L1M4 LINE L1 2538 3065 -3081 6903 224 42 19 chr18 17586337 17587982 -69089566 + L1M1 LINE L1 14 1695 -5870 621 238 27 7 chr18 17587983 17588130 -69089418 + LTR28 LTR ERV1 1 150 -870 342 200 97 18 chr18 17588181 17588308 -69089240 + MER52A LTR ERV1 545 658 -136 2885 214 40 10 chr18 17588308 17588615 -69088933 + L1M1 LINE L1 3502 3798 -3767 2225 89 0 80 chr18 17588615 17588942 -69088606 + AluSp SINE Alu 1 301 -12 2885 214 40 10 chr18 17588942 17589554 -69087994 + L1M1 LINE L1 3798 4451 -3114 2760 202 21 16 chr18 17589574 17590529 -69087019 + L1PB2 LINE L1 4577 5529 -622 2061 107 23 3 chr18 17590538 17590847 -69086701 + L1PB2 LINE L1 5829 6143 -8 4984 184 64 62 chr18 17590867 17591029 -69086519 + L1M1 LINE L1 4513 4673 -2892 2117 128 0 6 chr18 17591029 17591341 -69086207 + AluSx SINE Alu 1 310 -2 4984 184 64 62 chr18 17591341 17592767 -69084781 + L1M1 LINE L1 4673 6103 -1462 1063 121 35 15 chr18 17592781 17592980 -69084568 - L1MA3 LINE L1 -398 5907 5705 608 121 0 10 chr18 17592980 17593079 -69084469 + MER4A LTR ERV1 1 98 -566 1413 131 93 24 chr18 17593079 17593400 -69084148 + MER4A LTR ERV1 263 664 0 2350 199 38 6 chr18 17593400 17594370 -69083178 - L1MA3 LINE L1 -597 5708 4706 1774 170 50 10 chr18 17594373 17594756 -69082792 + L1MA2 LINE L1 5907 6304 0 30 27 0 0 chr18 17594756 17594793 -69082755 + AT_rich Low_complexity Low_complexity 1 37 0 273 250 92 58 chr18 17594995 17595115 -69082433 + L1MB2 LINE L1 206 329 -5562 406 272 60 9 chr18 17595179 17595411 -69082137 + L1MB2 LINE L1 4436 4679 -1291 * 846 253 86 9 chr18 17595409 17595733 -69081815 + L1MB2 LINE L1 5499 5847 -148 308 183 115 0 chr18 17595729 17595763 -69081785 + L1MB2 LINE L1 2543 2572 -3398 * 743 107 41 0 chr18 17595763 17595884 -69081664 - L1PA13 LINE L1 -3 6160 6035 308 183 115 0 chr18 17595884 17595953 -69081595 + L1MB2 LINE L1 2572 2658 -3312 1694 267 69 23 chr18 17595995 17596531 -69081017 + L1MB2 LINE L1 4332 4842 -1165 2062 134 0 14 chr18 17596531 17596822 -69080726 + AluSq SINE Alu 1 287 -26 1694 267 69 23 chr18 17596822 17597282 -69080266 + L1MB2 LINE L1 4842 5369 -638 859 222 52 71 chr18 17597291 17597373 -69080175 + L1MB2 LINE L1 5458 5540 -455 2108 166 49 7 chr18 17597373 17597784 -69079764 - MSTA LTR MaLR 0 428 1 859 222 52 71 chr18 17597784 17597872 -69079676 + L1MB2 LINE L1 5540 5628 -367 2340 86 0 0 chr18 17597872 17598164 -69079384 - AluY SINE Alu -19 292 1 859 222 52 71 chr18 17598164 17598357 -69079191 + L1MB2 LINE L1 5628 5815 -180 758 299 31 98 chr18 17598353 17599130 -69078418 + L1MA9 LINE L1 123 847 -5108 * 3120 239 65 29 chr18 17599208 17599440 -69078108 + L1MA9 LINE L1 3981 4203 -1831 590 240 0 0 chr18 17599440 17599561 -69077987 - FLAM_C SINE Alu -11 122 2 3120 239 65 29 chr18 17599561 17600557 -69076991 + L1MA9 LINE L1 4203 5254 -780 2463 189 93 44 chr18 17600560 17601292 -69076256 + L1MA9 LINE L1 5406 6173 -27 301 233 111 74 chr18 17601325 17601514 -69076034 + MER6 DNA MER2_type -64 852 -13 210 271 0 14 chr18 17601521 17601591 -69075957 + (TA)n Simple_repeat Simple_repeat 2 70 0 1192 97 15 46 chr18 17601760 17601955 -69075593 - MER30B DNA MER1_type 0 190 2 2089 36 0 0 chr18 17602589 17602836 -69074712 - L1PA5 LINE L1 -3 6151 5905 180 0 0 0 chr18 17603025 17603045 -69074503 + (A)n Simple_repeat Simple_repeat 1 20 0 1847 151 14 7 chr18 17603243 17603527 -69074021 + AluSx SINE Alu 1 286 -26 2488 72 0 10 chr18 17603696 17604000 -69073548 + AluSq SINE Alu 1 301 -12 304 294 73 29 chr18 17604596 17604732 -69072816 + MER5B DNA MER1_type 13 154 -24 257 342 174 6 chr18 17604762 17604923 -69072625 - MER5A DNA MER1_type 0 189 2 225 220 38 121 chr18 17605131 17605263 -69072285 - MIR SINE MIR -9 253 133 2310 94 0 3 chr18 17605495 17605792 -69071756 - AluSq SINE Alu -17 296 1 1506 222 79 22 chr18 17607762 17607814 -69069734 - MER67C LTR ERV1 -5 705 657 2314 49 0 14 chr18 17607814 17608100 -69069448 + AluY SINE Alu 1 302 0 181 0 0 0 chr18 17608100 17608120 -69069428 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1506 222 79 22 chr18 17608120 17608497 -69069051 - MER67C LTR ERV1 -53 657 156 315 0 0 0 chr18 17608497 17608532 -69069016 + (CA)n Simple_repeat Simple_repeat 2 36 0 1506 222 79 22 chr18 17608532 17608698 -69068850 - MER67C LTR ERV1 -554 156 1 997 237 82 9 chr18 17609445 17609762 -69067786 - MER21B LTR ERV1 -107 756 417 536 242 52 58 chr18 17609817 17610243 -69067305 + MER92B LTR ERV1 54 516 -120 1383 253 34 23 chr18 17611348 17611735 -69065813 + MER93a LTR ERV1 2 392 -10 525 234 140 9 chr18 17612664 17612736 -69064812 - MER33 DNA MER1_type -2275 310 249 1831 127 58 0 chr18 17612736 17613027 -69064521 + AluSg SINE Alu 3 310 0 525 234 140 9 chr18 17613027 17613176 -69064372 - MER33 DNA MER1_type -2336 249 60 519 274 45 25 chr18 17613495 17613652 -69063896 + MER5B DNA MER1_type 1 160 -18 187 242 136 30 chr18 17613828 17613894 -69063654 - L2 LINE L2 -9 3263 3191 401 303 130 10 chr18 17614129 17614337 -69063211 - L1ME3A LINE L1 -2 6168 5936 301 285 111 35 chr18 17614343 17614487 -69063061 - L1MC5 LINE L1 -33 7928 7774 29 70 0 0 chr18 17616662 17616719 -69060829 + AT_rich Low_complexity Low_complexity 1 57 0 1976 94 77 0 chr18 17617130 17617417 -69060131 + AluSg SINE Alu 1 309 -1 1292 190 25 65 chr18 17619309 17619630 -69057918 + AluJo SINE Alu 1 308 -4 231 298 12 60 chr18 17619909 17619993 -69057555 - L2 LINE L2 0 3313 3234 1847 142 6 39 chr18 17620177 17620488 -69057060 + AluSx SINE Alu 1 301 -11 974 104 0 0 chr18 17620490 17620624 -69056924 + AluSq/x SINE Alu 1 134 -179 1805 141 3 10 chr18 17621231 17621535 -69056013 - AluSx SINE Alu -10 302 1 2052 123 3 0 chr18 17621546 17621839 -69055709 - AluSg SINE Alu -16 294 1 246 136 0 0 chr18 17627311 17627355 -69050193 + (GGGA)n Simple_repeat Simple_repeat 1 44 0 223 324 73 15 chr18 17630132 17630268 -69047280 - MIR SINE MIR -97 165 22 1699 115 0 0 chr18 17630986 17631220 -69046328 - AluSq SINE Alu -79 234 1 571 258 48 22 chr18 17631227 17631456 -69046092 - L1M4 LINE L1 -3069 3077 2843 1093 214 14 14 chr18 17631634 17631854 -69045694 + MER58A DNA MER1_type 4 223 -1 1348 160 64 29 chr18 17631863 17632176 -69045372 + MER33 DNA MER1_type 1 324 0 24 67 0 0 chr18 17632748 17632793 -69044755 + AT_rich Low_complexity Low_complexity 1 45 0 2224 74 0 0 chr18 17634085 17634399 -69043149 - AluY SINE Alu 0 315 2 1912 122 7 20 chr18 17634412 17634716 -69042832 - AluSg1 SINE Alu -9 300 1 333 330 53 44 chr18 17634806 17635012 -69042536 - L1ME LINE L1 -386 5735 5528 2011 105 17 7 chr18 17635054 17635349 -69042199 - AluSg SINE Alu -12 298 1 23 78 0 0 chr18 17635543 17635594 -69041954 + AT_rich Low_complexity Low_complexity 1 51 0 1900 140 0 0 chr18 17637420 17637712 -69039836 - AluSx SINE Alu -14 298 7 8593 221 53 23 chr18 17638045 17638677 -69038871 + L1MC4a LINE L1 2658 3270 -2876 1812 153 10 3 chr18 17638677 17638972 -69038576 + AluSx SINE Alu 1 297 -15 8593 221 53 23 chr18 17638972 17640905 -69036643 + L1MC4a LINE L1 3270 5299 -847 2105 123 0 0 chr18 17641041 17641341 -69036207 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr18 17641485 17641507 -69036041 + AT_rich Low_complexity Low_complexity 1 22 0 2730 131 45 98 chr18 17641578 17642198 -69035350 + L1MB2 LINE L1 5584 6170 -1 41845 67 9 3 chr18 17642475 17647887 -69029661 + L1P2 LINE L1 13 5443 -712 1687 234 77 11 chr18 17647906 17648371 -69029177 - L1ME1 LINE L1 -9 6157 5662 878 135 26 47 chr18 17648606 17648799 -69028749 - L1MA9 LINE L1 0 6312 6124 342 365 48 23 chr18 17648800 17649238 -69028310 + L1MC4a LINE L1 5452 5900 -1908 1230 125 21 0 chr18 17649405 17649597 -69027951 - AluSg/x SINE Alu 0 310 115 2093 114 7 0 chr18 17649624 17649921 -69027627 + AluSp SINE Alu 1 299 -14 1007 149 47 56 chr18 17650012 17650227 -69027321 + L1MB7 LINE L1 5885 6097 -87 335 131 0 57 chr18 17650258 17650380 -69027168 + (CAGGG)n Simple_repeat Simple_repeat 2 116 0 383 153 0 95 chr18 17650404 17650593 -69026955 + (CAGGG)n Simple_repeat Simple_repeat 1 171 0 * 394 270 49 0 chr18 17650487 17650650 -69026898 + (CTAGGG)n Simple_repeat Simple_repeat 1 171 0 341 161 0 91 chr18 17650608 17651012 -69026536 + (CAGGG)n Simple_repeat Simple_repeat 1 367 0 * 201 119 0 94 chr18 17651094 17651253 -69026295 + (CAGGG)n Simple_repeat Simple_repeat 1 144 0 376 229 72 6 chr18 17651312 17651478 -69026070 + (CTAGGG)n Simple_repeat Simple_repeat 2 178 0 203 174 0 47 chr18 17651552 17651638 -69025910 + (CAGGG)n Simple_repeat Simple_repeat 5 86 0 43097 53 5 1 chr18 17651783 17657664 -69019884 - L1PA6 LINE L1 -246 5908 11 769 171 8 0 chr18 17657705 17657828 -69019720 + FLAM_C SINE Alu 2 125 -18 436 323 96 48 chr18 17658487 17658821 -69018727 - L1ME3A LINE L1 -27 6143 5794 5459 119 12 2 chr18 17658845 17659677 -69017871 - L1PA16 LINE L1 -11 6155 5316 503 174 0 56 chr18 17659777 17659921 -69017627 + L1P3 LINE L1 1463 1598 -4863 28705 55 3 11 chr18 17660152 17663965 -69013583 + L1P3 LINE L1 1753 5536 -925 28 29 0 0 chr18 17665247 17665282 -69012266 + AT_rich Low_complexity Low_complexity 1 35 0 2039 142 3 0 chr18 17665324 17665633 -69011915 - AluSx SINE Alu -2 310 1 274 189 47 31 chr18 17665645 17665772 -69011776 + (TA)n Simple_repeat Simple_repeat 1 129 0 306 326 43 7 chr18 17665974 17666115 -69011433 + L1ME LINE L1 5531 5676 -445 24 77 0 0 chr18 17666689 17666741 -69010807 + AT_rich Low_complexity Low_complexity 1 52 0 241 236 18 0 chr18 17666818 17666873 -69010675 - L2 LINE L2 -1 3271 3216 360 214 114 64 chr18 17667329 17667469 -69010079 - MER104 DNA Tc2 0 180 34 1684 186 0 7 chr18 17667569 17667865 -69009683 + AluJo SINE Alu 1 294 -18 466 249 181 49 chr18 17667869 17668074 -69009474 - MIR SINE MIR -11 251 20 245 274 129 48 chr18 17669752 17669876 -69007672 - MER5A DNA MER1_type 0 189 56 290 207 125 51 chr18 17669888 17669994 -69007554 + FLAM_A SINE Alu 1 124 -9 21 57 0 0 chr18 17670652 17670687 -69006861 + AT_rich Low_complexity Low_complexity 1 35 0 395 266 83 21 chr18 17670911 17671146 -69006402 + Charlie8 DNA MER1_type 81 1416 -1001 21 0 0 0 chr18 17671527 17671548 -69006000 + AT_rich Low_complexity Low_complexity 1 21 0 200 270 191 17 chr18 17672210 17672325 -69005223 - L2 LINE L2 0 3272 3138 2070 123 11 0 chr18 17673019 17673303 -69004245 - AluSc SINE Alu -22 287 1 237 132 0 0 chr18 17673352 17673390 -69004158 + (TTG)n Simple_repeat Simple_repeat 2 39 0 594 169 127 0 chr18 17674224 17674366 -69003182 - FLAM_C SINE Alu 0 157 1 21 0 0 0 chr18 17675181 17675202 -69002346 + AT_rich Low_complexity Low_complexity 1 21 0 578 208 0 0 chr18 17675318 17675424 -69002124 + U6 snRNA snRNA 1 106 -1 184 380 57 19 chr18 17676046 17676204 -69001344 - MIR SINE MIR -42 220 57 22 0 0 0 chr18 17676691 17676713 -69000835 + AT_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr18 17676941 17676983 -69000565 + AT_rich Low_complexity Low_complexity 1 42 0 1895 200 33 12 chr18 17676983 17677408 -69000140 - Tigger2a DNA MER2_type 0 434 1 263 300 0 0 chr18 17677663 17677723 -68999825 + (CA)n Simple_repeat Simple_repeat 2 61 0 853 187 0 0 chr18 17678018 17678157 -68999391 - FAM SINE Alu -25 160 22 1365 152 0 103 chr18 17678238 17678540 -68999008 - AluJb SINE Alu -41 271 1 2532 198 46 7 chr18 17678904 17679445 -68998103 - MER68 LTR ERV1 0 562 1 23 54 0 0 chr18 17679478 17679515 -68998033 + AT_rich Low_complexity Low_complexity 1 37 0 24 96 0 0 chr18 17679674 17679747 -68997801 + AT_rich Low_complexity Low_complexity 1 73 0 27 0 0 0 chr18 17679851 17679878 -68997670 + AT_rich Low_complexity Low_complexity 1 27 0 2166 110 7 10 chr18 17680001 17680310 -68997238 - AluSx SINE Alu -4 308 1 31 0 0 0 chr18 17680310 17680341 -68997207 + AT_rich Low_complexity Low_complexity 1 31 0 1900 156 17 0 chr18 17680378 17680673 -68996875 - AluSq SINE Alu -13 300 1 2399 153 4 40 chr18 17680683 17681139 -68996409 - L1MC1 LINE L1 0 6333 5894 882 125 44 0 chr18 17682143 17682279 -68995269 - Tigger7 DNA MER2_type 0 2491 2350 662 140 57 38 chr18 17682279 17682436 -68995112 + MER21A LTR ERV1 748 907 -24 628 224 0 24 chr18 17682880 17683005 -68994543 - FLAM_A SINE Alu -15 127 6 288 350 80 31 chr18 17683161 17683387 -68994161 - MIR SINE MIR -6 256 20 184 352 57 0 chr18 17684012 17684100 -68993448 - MIR SINE MIR -121 141 49 25 0 0 0 chr18 17685075 17685100 -68992448 + AT_rich Low_complexity Low_complexity 1 25 0 661 196 0 0 chr18 17686406 17686513 -68991035 + FLAM_A SINE Alu 1 107 -35 1904 137 0 67 chr18 17686766 17687080 -68990468 + AluSx SINE Alu 1 293 -19 801 202 42 75 chr18 17687376 17687589 -68989959 - AluJb SINE Alu -94 218 13 28 71 0 0 chr18 17687685 17687741 -68989807 + AT_rich Low_complexity Low_complexity 1 56 0 6260 41 14 0 chr18 17687972 17688732 -68988816 - L1PA5 LINE L1 -8 6146 5376 1600 199 0 7 chr18 17689118 17689400 -68988148 - AluJb SINE Alu -30 282 3 1327 240 0 24 chr18 17689434 17689730 -68987818 + AluJo SINE Alu 1 289 -23 2222 108 0 3 chr18 17689926 17690223 -68987325 + AluY SINE Alu 1 296 -15 250 195 195 12 chr18 17691093 17691175 -68986373 - MER5A DNA MER1_type -83 106 10 294 148 0 0 chr18 17693353 17693407 -68984141 + (TG)n Simple_repeat Simple_repeat 1 54 0 1841 172 0 0 chr18 17694400 17694703 -68982845 - AluSx SINE Alu -4 308 6 22 56 0 0 chr18 17694815 17694851 -68982697 + AT_rich Low_complexity Low_complexity 1 36 0 2000 140 7 0 chr18 17696472 17696792 -68980756 + AluSp SINE Alu 1 322 0 1908 162 7 0 chr18 17697223 17697525 -68980023 + AluSx SINE Alu 1 304 -8 194 225 0 0 chr18 17697807 17697847 -68979701 + L2 LINE L2 3262 3301 -12 1395 236 30 0 chr18 17698070 17698366 -68979182 - AluJo SINE Alu -7 305 1 26 30 0 0 chr18 17699055 17699088 -68978460 + AT_rich Low_complexity Low_complexity 1 33 0 625 58 23 0 chr18 17701088 17701174 -68976374 + L1PA5 LINE L1 6066 6153 -1 183 129 0 0 chr18 17702475 17702506 -68975042 + (A)n Simple_repeat Simple_repeat 1 31 0 21 57 0 0 chr18 17702749 17702784 -68974764 + AT_rich Low_complexity Low_complexity 1 35 0 24 53 0 0 chr18 17702850 17702888 -68974660 + AT_rich Low_complexity Low_complexity 1 38 0 24 67 0 0 chr18 17702964 17703009 -68974539 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr18 17703197 17703219 -68974329 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2002 139 0 3 chr18 17703225 17703520 -68974028 - AluSq SINE Alu -19 294 1 548 281 76 11 chr18 17703634 17703884 -68973664 + L1M2 LINE L1 5396 5659 -478 28 0 0 0 chr18 17703955 17703983 -68973565 + AT_rich Low_complexity Low_complexity 1 28 0 2684 135 88 11 chr18 17706988 17709108 -68968440 + SVA Other Other 343 868 -606 2455 145 44 77 chr18 17709881 17710425 -68967123 + SVA Other Other 343 868 -518 1920 168 65 17 chr18 17710469 17710886 -68966662 + SVA Other Other 432 868 -518 5415 123 60 30 chr18 17710932 17711858 -68965690 + SVA Other Other 433 1386 0 287 255 27 82 chr18 17712328 17712512 -68965036 + L1MC4 LINE L1 5862 6035 -2007 * 960 244 40 15 chr18 17712383 17712657 -68964891 + L1MB7 LINE L1 5904 6184 0 389 320 51 6 chr18 17713379 17713535 -68964013 - L2 LINE L2 -430 2884 2722 1900 219 81 26 chr18 17714598 17715091 -68962457 - L1MB8 LINE L1 -6 6172 5653 1456 186 10 24 chr18 17716193 17716489 -68961059 + AluJo SINE Alu 1 292 -20 2194 139 0 3 chr18 17716918 17717228 -68960320 + AluSx SINE Alu 1 309 -3 2241 118 0 3 chr18 17717576 17717880 -68959668 + AluSg SINE Alu 1 303 -7 204 111 0 0 chr18 17719133 17719169 -68958379 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1680 128 87 4 chr18 17719173 17719439 -68958109 - AluSg SINE Alu -22 288 1 343 186 0 14 chr18 17719701 17719771 -68957777 + MER34C LTR ERV1 423 491 -94 21 36 0 0 chr18 17719777 17719805 -68957743 + AT_rich Low_complexity Low_complexity 1 28 0 1949 148 3 58 chr18 17720320 17720650 -68956898 + AluSq SINE Alu 1 312 -1 3217 115 44 0 chr18 17721036 17721516 -68956032 - L1PA10 LINE L1 -13 6155 5655 1248 228 91 25 chr18 17721612 17721976 -68955572 - MER4E LTR ERV1 -391 388 1 1220 209 70 13 chr18 17722205 17722521 -68955027 - L1MB8 LINE L1 -12 6166 5833 2109 157 75 5 chr18 17722521 17722932 -68954616 - MER61C LTR ERV1 0 434 11 2473 196 42 45 chr18 17722941 17724005 -68953543 - L1MB8 LINE L1 -342 5836 4771 709 315 94 10 chr18 17725350 17725658 -68951890 - MLT1G1 LTR MaLR -34 561 228 263 275 0 29 chr18 17725660 17725729 -68951819 - MLT1G1 LTR MaLR -419 111 45 1282 163 89 0 chr18 17725766 17726036 -68951512 - L1MA5 LINE L1 -6 6294 6001 989 243 31 12 chr18 17726103 17726362 -68951186 - AluJo SINE Alu -48 264 1 2972 211 31 32 chr18 17726362 17727486 -68950062 - L1MA5 LINE L1 -354 5946 4824 1446 211 17 27 chr18 17727640 17727934 -68949614 - AluJo SINE Alu -16 296 6 390 257 0 0 chr18 17730358 17730459 -68947089 - L1MA9 LINE L1 -49 6263 6163 2013 144 3 3 chr18 17731409 17731707 -68945841 - AluSg SINE Alu -12 298 1 221 221 0 103 chr18 17731816 17732011 -68945537 + (CAGGA)n Simple_repeat Simple_repeat 3 177 0 * 346 230 79 6 chr18 17731888 17732053 -68945495 + (CTAGGG)n Simple_repeat Simple_repeat 2 178 0 295 240 0 73 chr18 17732014 17732193 -68945355 + (CAGGC)n Simple_repeat Simple_repeat 4 169 0 * 459 152 0 94 chr18 17732116 17732307 -68945241 + (CAGGG)n Simple_repeat Simple_repeat 2 174 0 466 291 30 0 chr18 17732315 17732480 -68945068 + (CTAGGG)n Simple_repeat Simple_repeat 3 172 0 326 303 29 11 chr18 17732512 17732687 -68944861 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 465 245 50 0 chr18 17732763 17733002 -68944546 + (CTAGGG)n Simple_repeat Simple_repeat 1 251 0 398 263 53 12 chr18 17733094 17733265 -68944283 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 371 294 47 0 chr18 17733283 17733453 -68944095 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 210 168 0 59 chr18 17733597 17733698 -68943850 + (CAGGG)n Simple_repeat Simple_repeat 1 95 0 231 202 36 0 chr18 17733726 17733810 -68943738 + (CTAGGG)n Simple_repeat Simple_repeat 2 88 0 377 163 0 113 chr18 17733846 17734049 -68943499 + (CAGGG)n Simple_repeat Simple_repeat 1 180 0 281 143 0 113 chr18 17734094 17734262 -68943286 + (CAGGG)n Simple_repeat Simple_repeat 1 149 0 202 167 8 56 chr18 17734302 17734428 -68943120 + (CAGGG)n Simple_repeat Simple_repeat 1 120 0 320 161 0 51 chr18 17734630 17734767 -68942781 + (CAGGG)n Simple_repeat Simple_repeat 2 131 0 681 239 88 53 chr18 17735604 17735943 -68941605 - HSREP522 Satellite telomeric -152 352 2 5316 219 58 8 chr18 17736074 17737374 -68940174 + L1 LINE L1 2785 4148 -1998 881 173 0 52 chr18 17737374 17737622 -68939926 - HSREP522 Satellite telomeric 0 504 270 5046 120 56 18 chr18 17737764 17738778 -68938770 + SVA Other Other 433 1300 -86 34 0 0 0 chr18 17738881 17738915 -68938633 + AT_rich Low_complexity Low_complexity 1 34 0 246 302 39 23 chr18 17740483 17740612 -68936936 + MLT1L LTR MaLR 126 256 -359 744 292 67 25 chr18 17741859 17742060 -68935488 - L1M4 LINE L1 -2527 3619 3428 2311 106 0 10 chr18 17742060 17742372 -68935176 - AluSc SINE Alu 0 309 1 744 292 67 25 chr18 17742372 17742650 -68934898 - L1M4 LINE L1 -2718 3428 3120 354 168 11 42 chr18 17743122 17743217 -68934331 - L1M4 LINE L1 -2988 3158 3067 * 3911 215 38 16 chr18 17743196 17743605 -68933943 - L1 LINE L1 -2228 3918 3520 194 62 31 0 chr18 17743605 17743637 -68933911 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 3911 215 38 16 chr18 17743637 17744314 -68933234 - L1 LINE L1 -2626 3520 2808 233 125 0 0 chr18 17744334 17744374 -68933174 + Alu SINE Alu 262 301 -1 1111 135 16 2 chr18 17744392 17744641 -68932907 - MER57B LTR ERV1 -4 430 126 863 206 101 38 chr18 17744741 17745008 -68932540 - MSTA LTR MaLR -69 359 76 411 255 11 0 chr18 17745013 17745107 -68932441 + MST-int LTR MaLR 976 1070 -581 * 581 187 53 33 chr18 17745104 17745254 -68932294 + THE1-int LTR MaLR 1039 1191 -389 315 179 18 0 chr18 17745242 17745298 -68932250 - THE1-int LTR MaLR -613 967 911 * 3785 102 29 6 chr18 17745369 17745919 -68931629 + LTR6A LTR ERV1 1 563 -1 492 168 21 0 chr18 17745950 17746045 -68931503 - MSTA LTR MaLR -331 97 1 1305 168 57 51 chr18 17746045 17746378 -68931170 - MSTA-int LTR MaLR 0 1651 1317 240 312 75 0 chr18 17746384 17746477 -68931071 - MSTA LTR MaLR -269 159 60 444 198 126 81 chr18 17746513 17746624 -68930924 - MSTA LTR MaLR -248 116 1 530 188 9 0 chr18 17746624 17746736 -68930812 - MSTA-int LTR MaLR 0 1651 1539 4779 234 67 30 chr18 17746736 17748044 -68929504 - MSTA-int LTR MaLR -262 1389 34 478 195 180 8 chr18 17748051 17748179 -68929369 + MST-int LTR MaLR 510 659 -992 949 234 60 15 chr18 17748215 17748484 -68929064 - MSTA LTR MaLR -52 376 96 754 231 193 21 chr18 17748504 17748747 -68928801 + THE1-int LTR MaLR 907 1191 -389 265 214 18 0 chr18 17748735 17748791 -68928757 - THE1-int LTR MaLR -613 967 911 * 283 213 33 0 chr18 17748908 17748969 -68928579 - MSTA LTR MaLR -363 65 3 1122 229 43 43 chr18 17748971 17749298 -68928250 - MSTA-int LTR MaLR 0 1651 1325 296 255 113 9 chr18 17749298 17749404 -68928144 - MSTA LTR MaLR -252 176 60 436 237 21 0 chr18 17749453 17749550 -68927998 - MSTA LTR MaLR -329 99 1 5926 231 69 21 chr18 17749550 17751095 -68926453 - MSTA-int LTR MaLR 0 1651 32 520 193 148 30 chr18 17751089 17751248 -68926300 + MST-int LTR MaLR 461 661 -963 * 858 250 55 49 chr18 17751256 17751564 -68925984 - MSTA LTR MaLR -43 385 76 703 228 191 21 chr18 17751568 17751809 -68925739 + THE1-int LTR MaLR 907 1188 -392 489 179 20 1 chr18 17751946 17752049 -68925499 - MSTA LTR MaLR -323 103 1 1054 237 16 38 chr18 17752050 17752367 -68925181 - MSTA-int LTR MaLR -1 1650 1341 326 240 53 13 chr18 17752373 17752448 -68925100 - MSTA LTR MaLR -257 171 94 444 219 10 0 chr18 17752520 17752616 -68924932 - MSTA LTR MaLR -331 97 1 624 143 18 0 chr18 17752616 17752728 -68924820 - MSTA-int LTR MaLR 0 1651 1538 286 233 8 45 chr18 17752744 17752877 -68924671 + (CACCC)n Simple_repeat Simple_repeat 3 130 0 418 202 42 34 chr18 17752881 17753000 -68924548 - MSTA LTR MaLR -308 120 1 1636 174 21 53 chr18 17753000 17753379 -68924169 - MSTA-int LTR MaLR 0 1651 1285 899 181 6 11 chr18 17753483 17753660 -68923888 + MST-int LTR MaLR 1476 1651 0 387 242 50 0 chr18 17753660 17753759 -68923789 + MSTA LTR MaLR 1 104 -324 308 226 32 0 chr18 17753835 17753897 -68923651 + MSTA LTR MaLR 96 159 -269 1432 208 3 40 chr18 17753904 17754251 -68923297 + MSTA-int LTR MaLR 1318 1651 0 506 168 21 0 chr18 17754251 17754346 -68923202 + MSTA LTR MaLR 1 97 -331 243 214 18 0 chr18 17754440 17754496 -68923052 + THE1-int LTR MaLR 911 967 -613 * 982 176 189 20 chr18 17754484 17754728 -68922820 - THE1-int LTR MaLR -389 1191 907 858 234 82 12 chr18 17754743 17754999 -68922549 + MSTA LTR MaLR 95 368 -60 356 259 27 48 chr18 17755035 17755182 -68922366 - THE1-int LTR MaLR -972 608 465 * 5936 227 48 42 chr18 17755179 17756793 -68920755 + MSTA-int LTR MaLR 28 1651 0 349 242 11 0 chr18 17756793 17756888 -68920660 + MSTA LTR MaLR 1 96 -332 211 173 13 67 chr18 17756908 17756983 -68920565 + G-rich Low_complexity Low_complexity 4 74 0 353 222 0 0 chr18 17756996 17757059 -68920489 + MSTA LTR MaLR 97 159 -269 1360 217 6 43 chr18 17757066 17757411 -68920137 + MSTA-int LTR MaLR 1318 1649 -2 527 144 31 21 chr18 17757413 17757510 -68920038 + MSTA LTR MaLR 1 98 -330 239 232 18 0 chr18 17757605 17757661 -68919887 + THE1-int LTR MaLR 911 967 -613 * 627 248 190 28 chr18 17757614 17757893 -68919655 - THE1-int LTR MaLR -368 1283 907 626 185 106 7 chr18 17757894 17758045 -68919503 + MSTA LTR MaLR 64 229 -199 472 208 50 0 chr18 17758086 17758206 -68919342 - THE1-int LTR MaLR -992 588 463 * 4582 229 39 35 chr18 17758199 17759729 -68917819 + MST-int LTR MaLR 27 1579 -72 243 154 0 0 chr18 17759733 17759772 -68917776 + MST-int LTR MaLR 623 661 -990 313 173 0 0 chr18 17759806 17759858 -68917690 - MSTA LTR MaLR -52 376 325 389 158 26 0 chr18 17759871 17759947 -68917601 + MST-int LTR MaLR 1574 1651 0 406 232 10 0 chr18 17759947 17760046 -68917502 + MSTA LTR MaLR 1 100 -328 323 205 45 89 chr18 17760082 17760194 -68917354 + MSTA LTR MaLR 65 171 -257 1362 219 3 46 chr18 17760194 17760541 -68917007 + MSTA-int LTR MaLR 1320 1651 0 556 135 21 10 chr18 17760541 17760637 -68916911 + MSTA LTR MaLR 1 97 -331 239 232 18 0 chr18 17760722 17760778 -68916770 + MST-int LTR MaLR 979 1035 -616 * 607 253 188 22 chr18 17760776 17761005 -68916543 - THE1-int LTR MaLR -402 1178 912 1082 225 87 30 chr18 17761005 17761303 -68916245 + MSTA LTR MaLR 60 374 -54 374 253 52 39 chr18 17761321 17761475 -68916073 - THE1-int LTR MaLR -963 617 462 * 6070 228 55 24 chr18 17761469 17763045 -68914503 + MSTA-int LTR MaLR 28 1651 0 402 232 10 0 chr18 17763045 17763144 -68914404 + MSTA LTR MaLR 1 100 -328 589 154 36 0 chr18 17763266 17763376 -68914172 + MST-int LTR MaLR 1538 1651 0 449 200 21 0 chr18 17763376 17763471 -68914077 + MSTA LTR MaLR 1 97 -331 271 280 53 13 chr18 17763543 17763618 -68913930 + MSTA LTR MaLR 94 171 -257 1172 227 16 35 chr18 17763624 17763941 -68913607 + MST-int LTR MaLR 1341 1651 0 368 175 48 58 chr18 17763943 17764046 -68913502 + MSTA LTR MaLR 3 104 -324 317 175 18 0 chr18 17764121 17764178 -68913370 + MSTA-int LTR MaLR 910 967 -613 * 470 197 51 43 chr18 17764169 17764286 -68913262 - THE1-int LTR MaLR -392 1188 1071 1839 154 7 0 chr18 17764397 17764689 -68912859 - AluSg SINE Alu -16 294 1 565 180 27 0 chr18 17765182 17765293 -68912255 + MST-int LTR MaLR 1538 1651 0 445 208 10 0 chr18 17765293 17765389 -68912159 + MSTA LTR MaLR 1 97 -331 297 213 41 107 chr18 17765414 17765536 -68912012 + MSTA LTR MaLR 58 171 -257 1138 226 16 38 chr18 17765542 17765860 -68911688 + MSTA-int LTR MaLR 1341 1651 0 460 198 19 5 chr18 17765860 17765964 -68911584 + MSTA LTR MaLR 1 119 -334 777 224 191 21 chr18 17766103 17766344 -68911204 - THE1-int LTR MaLR -392 1188 907 912 239 51 47 chr18 17766367 17766643 -68910905 + MSTA LTR MaLR 96 372 -56 555 183 148 30 chr18 17766663 17766822 -68910726 - MST-int LTR MaLR -963 661 461 * 4657 258 80 7 chr18 17766812 17768082 -68909466 + MSTA-int LTR MaLR 28 1389 -262 501 207 9 0 chr18 17768078 17768194 -68909354 + MSTA-int LTR MaLR 1535 1651 0 * 431 209 9 36 chr18 17768194 17768304 -68909244 + MSTA LTR MaLR 1 107 -321 331 262 103 9 chr18 17768341 17768448 -68909100 + MSTA LTR MaLR 60 176 -252 548 242 12 51 chr18 17768450 17768694 -68908854 + MST-int LTR MaLR 1029 1651 0 483 179 21 0 chr18 17768694 17768789 -68908759 + MSTA LTR MaLR 1 97 -331 3588 122 27 5 chr18 17768820 17769371 -68908177 - LTR6A LTR ERV1 -1 563 1 335 310 10 0 chr18 17769634 17769734 -68907814 - THE1-int LTR MaLR -573 1007 907 1112 232 56 4 chr18 17769758 17770025 -68907523 + MSTA LTR MaLR 96 376 -52 525 222 39 26 chr18 17770042 17770195 -68907353 - THE1-int LTR MaLR -963 617 463 * 5600 227 54 37 chr18 17770190 17771719 -68905829 + MSTA-int LTR MaLR 28 1583 -68 243 154 0 0 chr18 17771719 17771758 -68905790 + MST-int LTR MaLR 623 661 -990 290 167 0 37 chr18 17771800 17771854 -68905694 - MSTA LTR MaLR -60 368 317 387 158 26 0 chr18 17771856 17771932 -68905616 + MST-int LTR MaLR 1574 1651 0 428 232 10 0 chr18 17771932 17772031 -68905517 + MSTA LTR MaLR 1 100 -328 350 234 149 0 chr18 17772076 17772183 -68905365 + MSTA LTR MaLR 58 180 -248 1366 211 3 41 chr18 17772183 17772524 -68905024 + MSTA-int LTR MaLR 1324 1651 0 518 138 43 11 chr18 17772524 17772618 -68904930 + MSTA LTR MaLR 1 97 -331 521 259 184 25 chr18 17772751 17772990 -68904558 - MST-int LTR MaLR -399 1252 976 890 264 63 7 chr18 17772998 17773282 -68904266 + MSTA LTR MaLR 75 374 -54 368 235 160 10 chr18 17773300 17773454 -68904094 - MST-int LTR MaLR -963 661 462 5958 239 52 22 chr18 17773454 17775025 -68902523 + MSTA-int LTR MaLR 34 1651 0 426 221 11 0 chr18 17775025 17775120 -68902428 + MSTA LTR MaLR 1 96 -332 502 207 27 0 chr18 17775247 17775358 -68902190 + MST-int LTR MaLR 1538 1651 0 427 226 11 0 chr18 17775361 17775454 -68902094 + MSTA LTR MaLR 4 97 -331 246 259 54 62 chr18 17775489 17775601 -68901947 + MSTA LTR MaLR 61 171 -257 1204 189 31 53 chr18 17775607 17775925 -68901623 + MSTA-int LTR MaLR 1341 1651 0 462 179 23 5 chr18 17775927 17776031 -68901517 + MSTA LTR MaLR 3 113 -262 315 190 17 0 chr18 17776118 17776176 -68901372 + THE1-int LTR MaLR 910 968 -612 * 762 228 191 21 chr18 17776166 17776407 -68901141 - THE1-int LTR MaLR -392 1188 907 814 245 85 41 chr18 17776411 17776705 -68900843 + MSTA LTR MaLR 66 372 -56 534 201 156 10 chr18 17776725 17776876 -68900672 - MST-int LTR MaLR -963 661 466 * 835 209 11 7 chr18 17776872 17777076 -68900472 + MSTA-int LTR MaLR 28 230 -1269 * 4493 229 76 26 chr18 17777074 17778240 -68899308 + MSTA-int LTR MaLR 427 1651 0 469 175 31 10 chr18 17778240 17778337 -68899211 + MSTA LTR MaLR 1 99 -329 289 275 99 0 chr18 17778386 17778477 -68899071 + MSTA LTR MaLR 60 159 -269 1236 220 36 42 chr18 17778483 17778820 -68898728 + MSTA-int LTR MaLR 1317 1651 0 307 197 33 0 chr18 17778822 17778883 -68898665 + MSTA LTR MaLR 3 65 -363 259 208 21 0 chr18 17779014 17779062 -68898486 + MST-int LTR MaLR 987 1035 -616 * 690 238 195 22 chr18 17779060 17779291 -68898257 - THE1-int LTR MaLR -402 1178 908 957 249 63 7 chr18 17779296 17779581 -68897967 + MSTA LTR MaLR 76 376 -52 494 212 167 8 chr18 17779617 17779749 -68897799 - MST-int LTR MaLR -992 659 507 * 4722 238 68 25 chr18 17779747 17781053 -68896495 + MSTA-int LTR MaLR 28 1389 -262 517 207 9 0 chr18 17781049 17781165 -68896383 + MSTA-int LTR MaLR 1535 1651 0 * 456 204 20 10 chr18 17781165 17781263 -68896285 + MSTA LTR MaLR 1 99 -329 272 280 103 9 chr18 17781312 17781419 -68896129 + MSTA LTR MaLR 60 176 -252 1244 201 50 43 chr18 17781421 17781744 -68895804 + MSTA-int LTR MaLR 1327 1651 0 482 179 21 0 chr18 17781744 17781839 -68895709 + MSTA LTR MaLR 1 97 -331 3749 108 29 4 chr18 17781870 17782419 -68895129 - LTR6A LTR ERV1 -1 563 1 295 200 36 0 chr18 17782490 17782545 -68895003 + THE1-int LTR MaLR 911 967 -613 * 772 191 191 56 chr18 17782533 17782784 -68894764 - THE1-int LTR MaLR -389 1191 907 1001 209 99 32 chr18 17782788 17783070 -68894478 + MSTA LTR MaLR 76 376 -52 331 266 37 9 chr18 17783112 17783221 -68894327 - THE1-int LTR MaLR -1003 577 466 5685 233 56 38 chr18 17783225 17784815 -68892733 + MSTA-int LTR MaLR 34 1651 0 400 232 50 0 chr18 17784815 17784914 -68892634 + MSTA LTR MaLR 1 104 -324 334 210 32 0 chr18 17784989 17785051 -68892497 + MSTA LTR MaLR 96 159 -269 330 145 0 43 chr18 17785058 17785127 -68892421 + MSTA-int LTR MaLR 1318 1383 -268 242 284 14 0 chr18 17785229 17785303 -68892245 - LTR6B LTR ERV1 -342 216 142 320 179 18 0 chr18 17785475 17785531 -68892017 + MSTA-int LTR MaLR 911 967 -613 * 830 203 198 21 chr18 17785519 17785761 -68891787 - THE1-int LTR MaLR -389 1191 907 993 201 95 35 chr18 17785765 17786049 -68891499 + MSTA LTR MaLR 76 376 -52 303 284 37 9 chr18 17786091 17786200 -68891348 - THE1-int LTR MaLR -1003 577 466 5575 233 56 40 chr18 17786204 17787797 -68889751 + MSTA-int LTR MaLR 34 1651 0 380 242 50 0 chr18 17787797 17787896 -68889652 + MSTA LTR MaLR 1 104 -324 305 242 32 0 chr18 17787971 17788033 -68889515 + MSTA LTR MaLR 96 159 -269 1341 220 6 40 chr18 17788040 17788386 -68889162 + MSTA-int LTR MaLR 1318 1651 0 539 158 21 0 chr18 17788386 17788481 -68889067 + MSTA LTR MaLR 1 97 -331 230 234 21 0 chr18 17788580 17788627 -68888921 + THE1-int LTR MaLR 917 964 -616 530 221 25 22 chr18 17788631 17788860 -68888688 - THE1-int LTR MaLR -405 1175 907 937 223 82 12 chr18 17788875 17789131 -68888417 + MSTA LTR MaLR 95 368 -60 417 259 21 14 chr18 17789167 17789310 -68888238 - THE1-int LTR MaLR -972 608 465 * 6061 222 50 43 chr18 17789307 17790920 -68886628 + MSTA-int LTR MaLR 28 1651 0 376 242 10 0 chr18 17790920 17791019 -68886529 + MSTA LTR MaLR 1 100 -328 297 257 9 55 chr18 17791077 17791186 -68886362 + MSTA LTR MaLR 56 159 -269 1424 198 9 48 chr18 17791193 17791526 -68886022 + MST-int LTR MaLR 1318 1637 -14 502 155 21 10 chr18 17791542 17791639 -68885909 + MSTA LTR MaLR 1 98 -330 640 241 198 25 chr18 17791781 17792018 -68885530 - THE1-int LTR MaLR -392 1188 911 1145 180 98 27 chr18 17792018 17792313 -68885235 + MSTA LTR MaLR 61 376 -52 507 240 32 26 chr18 17792330 17792484 -68885064 - THE1-int LTR MaLR -963 617 463 * 5326 242 52 36 chr18 17792479 17794010 -68883538 + MSTA-int LTR MaLR 28 1583 -68 237 154 0 0 chr18 17794010 17794049 -68883499 + MST-int LTR MaLR 623 661 -990 346 161 0 32 chr18 17794083 17794145 -68883403 - MSTA LTR MaLR -52 376 317 377 171 26 0 chr18 17794147 17794223 -68883325 + MST-int LTR MaLR 1574 1651 0 373 263 10 0 chr18 17794223 17794322 -68883226 + MSTA LTR MaLR 1 100 -328 326 204 83 46 chr18 17794368 17794476 -68883072 + MSTA LTR MaLR 65 176 -252 1416 197 12 50 chr18 17794476 17794816 -68882732 + MSTA-int LTR MaLR 1325 1651 0 526 152 30 17 chr18 17794816 17794925 -68882623 + MSTA LTR MaLR 1 113 -251 742 181 242 44 chr18 17795051 17795278 -68882270 - THE1-int LTR MaLR -402 1178 907 931 240 66 28 chr18 17795282 17795570 -68881978 + MSTA LTR MaLR 76 374 -54 368 255 145 9 chr18 17795588 17795743 -68881805 - MST-int LTR MaLR -963 661 463 * 6475 221 57 24 chr18 17795738 17797309 -68880239 + MSTA-int LTR MaLR 28 1651 0 408 202 42 34 chr18 17797309 17797428 -68880120 + MSTA LTR MaLR 1 120 -308 213 195 49 24 chr18 17797432 17797514 -68880034 + (GGGTG)n Simple_repeat Simple_repeat 2 85 0 205 217 22 0 chr18 17797572 17797618 -68879930 + T-rich Low_complexity Low_complexity 5 51 0 207 326 30 15 chr18 17797682 17797817 -68879731 + CT-rich Low_complexity Low_complexity 6 142 0 1030 137 6 16 chr18 17798101 17798283 -68879265 + AluSg/x SINE Alu 119 298 -11 1896 143 17 0 chr18 17798461 17798762 -68878786 + AluSx SINE Alu 1 306 -6 4437 178 29 26 chr18 17798798 17799939 -68877609 + L1PA16 LINE L1 5026 6166 0 2084 125 0 0 chr18 17800092 17800395 -68877153 - AluSc SINE Alu -6 303 1 21 0 0 0 chr18 17800757 17800778 -68876770 + AT_rich Low_complexity Low_complexity 1 21 0 244 258 225 45 chr18 17801306 17801484 -68876064 + L2 LINE L2 2836 3045 -227 1210 216 229 15 chr18 17802341 17802799 -68874749 - L1MC4 LINE L1 -668 7374 6819 324 209 56 44 chr18 17803353 17803539 -68874009 - HSAT5 Satellite Satellite 0 188 1 227 258 0 45 chr18 17803620 17803709 -68873839 - HSAT5 Satellite Satellite -1 85 1 284 215 12 47 chr18 17803728 17803921 -68873627 - HSAT5 Satellite Satellite -1 186 1 237 222 0 0 chr18 17804317 17804380 -68873168 + (CA)n Simple_repeat Simple_repeat 2 64 0 2057 99 90 44 chr18 17804624 17805059 -68872489 - SN5 Other centromeric 0 455 1 1335 237 98 6 chr18 17807138 17807475 -68870073 + MSTA LTR MaLR 1 368 -60 1271 198 8 0 chr18 17807492 17807740 -68869808 + MSTA-int LTR MaLR 1 250 -1401 * 1378 175 8 12 chr18 17807737 17807989 -68869559 + MSTA-int LTR MaLR 1401 1651 0 1313 242 26 47 chr18 17807989 17808373 -68869175 + MSTA LTR MaLR 1 376 -52 470 218 157 7 chr18 17808398 17808545 -68869003 - MST-int LTR MaLR -981 670 502 256 297 30 0 chr18 17808536 17808637 -68868911 + MSTA-int LTR MaLR 28 131 -1449 * 283 164 36 0 chr18 17808754 17808809 -68868739 + MSTA-int LTR MaLR 979 1035 -616 * 875 211 198 21 chr18 17808797 17809039 -68868509 - MSTA-int LTR MaLR -389 1191 907 1261 204 63 7 chr18 17809044 17809328 -68868220 + MSTA LTR MaLR 77 376 -52 500 224 149 2 chr18 17809344 17809495 -68868053 - MSTA-int LTR MaLR -963 661 466 * 5435 247 61 22 chr18 17809491 17811056 -68866492 + MSTA-int LTR MaLR 27 1651 0 376 242 10 0 chr18 17811056 17811155 -68866393 + MSTA LTR MaLR 1 100 -328 4032 227 48 13 chr18 17811318 17812292 -68865256 - MSTA-int LTR MaLR -616 1035 28 364 241 145 9 chr18 17812287 17812442 -68865106 + MST-int LTR MaLR 463 661 -963 * 1058 246 52 17 chr18 17812460 17812749 -68864799 - MSTA LTR MaLR -54 374 76 770 215 224 21 chr18 17812753 17812990 -68864558 + THE1-int LTR MaLR 907 1191 -389 526 152 30 17 chr18 17813105 17813214 -68864334 - MSTA LTR MaLR -251 113 1 1138 234 4 8 chr18 17813214 17813478 -68864070 - MSTA-int LTR MaLR 0 1651 1069 310 278 101 18 chr18 17813492 17813661 -68863887 - MSTA LTR MaLR -188 240 58 374 263 10 0 chr18 17813706 17813805 -68863743 - MSTA LTR MaLR -328 100 1 375 100 33 0 chr18 17813805 17813865 -68863683 - MSTA-int LTR MaLR 0 1651 1590 346 161 0 32 chr18 17813882 17813944 -68863604 + MSTA LTR MaLR 317 376 -52 237 154 0 0 chr18 17813978 17814017 -68863531 - MSTA-int LTR MaLR -990 661 623 5338 233 52 37 chr18 17814017 17815550 -68861998 - MSTA-int LTR MaLR -68 1583 28 495 229 39 26 chr18 17815545 17815698 -68861850 + THE1-int LTR MaLR 463 617 -963 * 1002 234 80 20 chr18 17815715 17816014 -68861534 - MSTA LTR MaLR -52 376 60 614 235 205 26 chr18 17816015 17816249 -68861299 + THE1-int LTR MaLR 913 1188 -392 273 133 33 50 chr18 17816239 17816299 -68861249 - THE1-int LTR MaLR -612 968 910 * 507 156 21 10 chr18 17816392 17816488 -68861060 - MSTA LTR MaLR -331 97 1 1335 222 3 42 chr18 17816503 17816836 -68860712 - MSTA-int LTR MaLR -14 1637 1318 355 231 0 0 chr18 17816843 17816908 -68860640 - MSTA LTR MaLR -269 159 95 264 239 52 30 chr18 17816919 17817053 -68860495 + C-rich Low_complexity Low_complexity 4 140 0 372 253 10 0 chr18 17817069 17817168 -68860380 - MSTA LTR MaLR -328 100 1 5920 226 50 42 chr18 17817168 17818780 -68858768 - MSTA-int LTR MaLR 0 1651 28 403 194 146 62 chr18 17818777 17818921 -68858627 + THE1-int LTR MaLR 465 661 -990 * 847 234 82 12 chr18 17818963 17819219 -68858329 - MSTA LTR MaLR -60 368 95 788 217 189 20 chr18 17819234 17819478 -68858070 + THE1-int LTR MaLR 907 1191 -389 242 232 18 0 chr18 17819466 17819522 -68858026 - MST-int LTR MaLR -616 1035 979 * 516 168 21 0 chr18 17819605 17819700 -68857848 - MSTA LTR MaLR -331 97 1 1305 225 3 40 chr18 17819700 17820047 -68857501 - MSTA-int LTR MaLR 0 1651 1318 297 266 85 0 chr18 17820054 17820148 -68857400 - MSTA LTR MaLR -269 159 58 447 208 19 38 chr18 17820185 17820291 -68857257 - MSTA LTR MaLR -324 104 1 5611 236 54 38 chr18 17820291 17821883 -68855665 - MSTA-int LTR MaLR 0 1651 34 296 284 37 9 chr18 17821887 17821996 -68855552 + THE1-int LTR MaLR 466 577 -1003 985 196 76 54 chr18 17822038 17822314 -68855234 - MSTA LTR MaLR -52 376 95 576 244 180 56 chr18 17822327 17822577 -68854971 + MST-int LTR MaLR 976 1256 -395 3844 96 27 5 chr18 17822692 17823243 -68854305 + LTR6A LTR ERV1 1 563 -1 440 189 21 0 chr18 17823274 17823369 -68854179 - MSTA LTR MaLR -331 97 1 1268 211 40 46 chr18 17823369 17823696 -68853852 - MSTA-int LTR MaLR 0 1651 1327 318 255 85 11 chr18 17823698 17823792 -68853756 - MSTA LTR MaLR -252 176 76 511 194 10 0 chr18 17823849 17823947 -68853601 - MSTA LTR MaLR -329 99 1 532 198 9 0 chr18 17823947 17824063 -68853485 - MSTA-int LTR MaLR 0 1651 1535 * 4790 243 69 25 chr18 17824059 17825363 -68852185 - MSTA-int LTR MaLR -262 1389 28 496 212 167 8 chr18 17825361 17825493 -68852055 + MST-int LTR MaLR 507 659 -992 * 1035 234 52 7 chr18 17825529 17825798 -68851750 - MSTA LTR MaLR -52 376 96 597 258 189 21 chr18 17825818 17826051 -68851497 + THE1-int LTR MaLR 907 1178 -402 253 245 19 0 chr18 17826049 17826102 -68851446 - THE1-int LTR MaLR -613 967 914 * 320 194 29 2 chr18 17826208 17826282 -68851266 - MSTA LTR MaLR -356 76 3 1213 231 36 33 chr18 17826285 17826618 -68850930 - MSTA-int LTR MaLR -1 1650 1317 293 256 105 0 chr18 17826624 17826710 -68850838 - MSTA LTR MaLR -269 159 65 525 186 21 0 chr18 17826763 17826860 -68850688 - MSTA LTR MaLR -329 99 1 4489 233 76 22 chr18 17826860 17828023 -68849525 - MSTA-int LTR MaLR 0 1651 427 838 205 11 7 chr18 17828021 17828225 -68849323 - MSTA-int LTR MaLR -1269 102 28 * 572 188 156 10 chr18 17828221 17828372 -68849176 + MSTA-int LTR MaLR 466 661 -963 * 274 259 86 9 chr18 17828380 17828496 -68849052 - MSTA LTR MaLR -43 385 261 549 226 226 43 chr18 17828608 17828838 -68848710 - THE1-int LTR MaLR -402 1178 907 931 214 72 51 chr18 17828851 17829127 -68848421 + MSTA LTR MaLR 95 376 -52 293 284 37 9 chr18 17829169 17829278 -68848270 - THE1-int LTR MaLR -1003 577 466 5579 226 56 38 chr18 17829282 17830872 -68846676 + MSTA-int LTR MaLR 34 1651 0 386 242 50 0 chr18 17830872 17830971 -68846577 + MSTA LTR MaLR 1 104 -324 309 226 32 0 chr18 17831047 17831109 -68846439 + MSTA LTR MaLR 96 159 -269 1427 210 3 40 chr18 17831116 17831463 -68846085 + MSTA-int LTR MaLR 1318 1651 0 505 168 21 0 chr18 17831463 17831558 -68845990 + MSTA LTR MaLR 1 97 -331 276 196 18 0 chr18 17831652 17831708 -68845840 + THE1-int LTR MaLR 911 967 -613 * 990 180 189 20 chr18 17831696 17831940 -68845608 - THE1-int LTR MaLR -389 1191 907 889 216 74 16 chr18 17831944 17832211 -68845337 + MSTA LTR MaLR 75 368 -60 382 200 150 36 chr18 17832253 17832393 -68845155 - MST-int LTR MaLR -990 661 506 * 6133 223 51 45 chr18 17832390 17834005 -68843543 + MSTA-int LTR MaLR 28 1651 0 382 222 22 11 chr18 17834010 17834100 -68843448 + MSTA LTR MaLR 9 99 -329 311 230 130 10 chr18 17834149 17834249 -68843299 + MSTA LTR MaLR 60 171 -257 1082 221 92 20 chr18 17834257 17834560 -68842988 + MSTA-int LTR MaLR 1327 1651 0 348 193 102 0 chr18 17834560 17834648 -68842900 + MSTA LTR MaLR 1 97 -331 263 167 155 24 chr18 17834697 17834781 -68842767 + THE1-int LTR MaLR 921 967 -613 * 761 238 189 20 chr18 17834769 17835013 -68842535 - THE1-int LTR MaLR -389 1191 907 484 260 58 24 chr18 17835017 17835215 -68842333 + MSTA LTR MaLR 75 285 -141 321 230 12 6 chr18 17835199 17835305 -68842243 - HSAT5 Satellite Satellite -1 106 1 * 251 263 38 12 chr18 17835379 17835459 -68842089 - HSAT5 Satellite Satellite -2 84 3 333 181 36 48 chr18 17835541 17835624 -68841924 - HSAT5 Satellite Satellite -4 82 1 635 183 0 3 chr18 17835849 17836012 -68841536 - HSAT5 Satellite Satellite 0 162 1 244 280 99 21 chr18 17840120 17840271 -68837277 + MIR SINE MIR 45 208 -54 1152 263 19 3 chr18 17840615 17840927 -68836621 + LTR16C LTR ERVL 146 462 -29 391 322 0 0 chr18 17841050 17841168 -68836380 - MIR SINE MIR -122 140 23 441 339 133 0 chr18 17841312 17841530 -68836018 - MIR SINE MIR -1 261 15 475 235 143 14 chr18 17841819 17842036 -68835512 - LTR33 LTR ERVL 0 521 277 471 315 112 8 chr18 17842916 17843183 -68834365 + L2 LINE L2 2995 3289 -24 1548 183 193 10 chr18 17843225 17843614 -68833934 + LTR46 LTR ERV1 1 460 0 297 304 128 8 chr18 17843615 17843740 -68833808 - MIR3 SINE MIR -51 157 18 757 280 67 64 chr18 17844129 17844566 -68832982 + MLT1K LTR MaLR 76 586 -2 500 153 276 0 chr18 17844810 17844908 -68832640 - FLAM_C SINE Alu -17 126 2 261 151 0 0 chr18 17844960 17845013 -68832535 + (TG)n Simple_repeat Simple_repeat 1 53 0 255 309 0 24 chr18 17845026 17845110 -68832438 + MIR SINE MIR 161 242 -20 198 208 167 0 chr18 17845118 17845190 -68832358 - L3 LINE CR1 -1430 147 64 234 91 0 0 chr18 17845296 17845329 -68832219 + (TA)n Simple_repeat Simple_repeat 1 33 0 1312 206 24 40 chr18 17845966 17846262 -68831286 + AluJb SINE Alu 1 291 -11 24 53 0 0 chr18 17846262 17846300 -68831248 + AT_rich Low_complexity Low_complexity 1 38 0 3326 128 18 2 chr18 17847990 17848499 -68829049 - L1PB1 LINE L1 -4 6147 5631 1456 292 37 5 chr18 17849252 17849659 -68827889 - MER70A LTR ERVL -49 423 4 300 259 0 126 chr18 17849670 17849813 -68827735 + L1ME LINE L1 2346 2470 -3676 389 307 80 49 chr18 17850016 17850280 -68827268 + L1ME LINE L1 5352 5623 -547 836 130 16 0 chr18 17850305 17850427 -68827121 + MSTB LTR MaLR 1 124 -302 993 152 162 0 chr18 17850427 17850522 -68827026 + MER30 DNA MER1_type 1 79 -151 396 0 0 0 chr18 17850522 17850566 -68826982 + (CA)n Simple_repeat Simple_repeat 2 45 0 993 152 162 0 chr18 17850566 17850668 -68826880 + MER30 DNA MER1_type 79 230 0 * 1451 163 59 42 chr18 17850668 17850973 -68826575 + MSTB LTR MaLR 117 426 0 1218 203 14 28 chr18 17851719 17852005 -68825543 + AluJo SINE Alu 1 282 -30 23 78 0 0 chr18 17853587 17853638 -68823910 + AT_rich Low_complexity Low_complexity 1 51 0 41 36 0 0 chr18 17854205 17854260 -68823288 + AT_rich Low_complexity Low_complexity 1 55 0 283 359 85 32 chr18 17854484 17854860 -68822688 - L2 LINE L2 -470 2844 2449 319 208 15 0 chr18 17856475 17856605 -68820943 + (TG)n Simple_repeat Simple_repeat 2 133 0 631 261 53 0 chr18 17857623 17857810 -68819738 - MER67D LTR ERV1 -114 400 225 26 0 0 0 chr18 17857810 17857836 -68819712 + AT_rich Low_complexity Low_complexity 1 26 0 1799 148 10 10 chr18 17858063 17858374 -68819174 + AluSx SINE Alu 1 311 -1 183 281 37 61 chr18 17859750 17859832 -68817716 + L3 LINE CR1 1354 1433 -144 2041 176 22 16 chr18 17860148 17860511 -68817037 + MLT1A1 LTR MaLR 1 365 0 4975 51 106 125 chr18 17861815 17862724 -68814824 - SVA Other Other -439 947 57 222 37 0 0 chr18 17862724 17862751 -68814797 + (GGGAGA)n Simple_repeat Simple_repeat 1 27 0 904 221 39 0 chr18 17865232 17865413 -68812135 - MER5A DNA MER1_type 0 189 2 1923 139 26 23 chr18 17867126 17867436 -68810112 - AluSx SINE Alu -1 311 1 937 165 125 76 chr18 17867476 17867700 -68809848 - MER46A DNA MER2_type 0 236 2 182 233 0 0 chr18 17868878 17868921 -68808627 + MIR SINE MIR 99 141 -67 195 42 0 0 chr18 17869579 17869603 -68807945 + (A)n Simple_repeat Simple_repeat 1 24 0 614 222 33 39 chr18 17872993 17873036 -68804512 - MIR SINE MIR -97 165 123 4569 120 32 32 chr18 17873036 17873727 -68803821 + LTR8 LTR ERV1 1 691 0 614 222 33 39 chr18 17873727 17873836 -68803712 - MIR SINE MIR -139 123 14 1657 79 0 9 chr18 17874273 17874489 -68803059 + L1PA6 LINE L1 5940 6153 -1 418 312 74 16 chr18 17874735 17874963 -68802585 + MIR SINE MIR 22 261 -1 831 216 51 31 chr18 17875051 17875306 -68802242 + LTR37B LTR ERV1 209 468 0 281 248 40 50 chr18 17875673 17875774 -68801774 - MLT2E LTR ERVL -497 131 32 424 283 13 53 chr18 17876033 17876249 -68801299 + MIR SINE MIR 1 209 -53 2243 103 7 0 chr18 17876380 17876670 -68800878 + AluSq SINE Alu 1 292 -21 2275 71 11 0 chr18 17876908 17877216 -68800332 + AluSp SINE Alu 1 311 0 1328 187 45 84 chr18 17877453 17877812 -68799736 + MLT1A1 LTR MaLR 21 365 0 1722 195 0 3 chr18 17878125 17878579 -68798969 - AluJo SINE Alu 0 453 1 2752 147 44 16 chr18 17878749 17879247 -68798301 + L1MB2 LINE L1 5658 6169 -2 29 28 0 0 chr18 17880030 17880066 -68797482 + AT_rich Low_complexity Low_complexity 1 36 0 1212 225 82 62 chr18 17880355 17880769 -68796779 - MLT1C LTR MaLR 0 467 42 1932 185 3 62 chr18 17880769 17880813 -68796735 + MLT1A1 LTR MaLR 5 50 -315 2098 106 42 0 chr18 17880813 17881096 -68796452 - AluSx SINE Alu -17 295 1 1932 185 3 62 chr18 17881096 17881435 -68796113 + MLT1A1 LTR MaLR 50 365 0 1212 225 82 62 chr18 17881435 17881473 -68796075 - MLT1C LTR MaLR -425 42 6 24 53 0 0 chr18 17881748 17881786 -68795762 + AT_rich Low_complexity Low_complexity 1 38 0 308 292 73 10 chr18 17881966 17882062 -68795486 - L2 LINE L2 -20 3252 3151 2334 92 0 0 chr18 17882340 17882654 -68794894 + L1PA7 LINE L1 5846 6159 0 199 415 15 7 chr18 17883901 17884036 -68793512 + MIR SINE MIR 18 153 -109 964 318 68 21 chr18 17884053 17884537 -68793011 - LTR33 LTR ERVL -12 509 3 432 344 8 54 chr18 17884730 17884971 -68792577 + MLT1K LTR MaLR 277 506 -82 585 269 123 62 chr18 17884989 17885395 -68792153 - LTR33A LTR ERVL -92 431 1 2809 6 0 6 chr18 17885673 17885985 -68791563 - AluYa5 SINE Alu -1 310 1 210 329 154 13 chr18 17886356 17886505 -68791043 + MIR3 SINE MIR 16 185 -23 23 0 0 0 chr18 17886965 17886988 -68790560 + AT_rich Low_complexity Low_complexity 1 23 0 1044 173 60 5 chr18 17887540 17887725 -68789823 - L1PA16 LINE L1 -9 6157 5963 2170 136 0 0 chr18 17887934 17888228 -68789320 + AluSg SINE Alu 1 294 -16 2124 289 58 40 chr18 17890586 17891254 -68786294 + L2 LINE L2 1745 2430 -884 597 276 74 0 chr18 17891254 17891417 -68786131 - MER96 DNA MER1_type 0 175 1 2124 289 58 40 chr18 17891417 17891520 -68786028 + L2 LINE L2 2430 2530 -784 1625 210 6 3 chr18 17891693 17892012 -68785536 - L1MC2 LINE L1 -1 6343 6024 231 348 45 11 chr18 17892368 17892457 -68785091 + L2 LINE L2 3125 3216 -56 206 32 32 0 chr18 17893203 17893234 -68784314 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 3559 5 0 0 chr18 17893236 17893603 -68783945 - SVA Other Other -20 1366 1000 280 244 26 78 chr18 17894448 17894563 -68782985 - MIR SINE MIR -42 220 112 239 302 88 33 chr18 17894971 17895153 -68782395 - L3 LINE CR1 -170 1407 1216 427 290 15 95 chr18 17896505 17896705 -68780843 + MIR3 SINE MIR 20 203 -5 519 104 0 13 chr18 17897198 17897275 -68780273 + MADE1 DNA Mariner 1 76 -4 396 312 38 38 chr18 17897577 17897763 -68779785 - MER5A DNA MER1_type 0 189 4 229 309 48 68 chr18 17897800 17898007 -68779541 + L2 LINE L2 1255 1457 -1857 658 248 81 6 chr18 17898557 17898718 -68778830 + L1MC4 LINE L1 6689 6861 -1181 464 308 17 6 chr18 17899361 17899533 -68778015 + L1MC4 LINE L1 7724 7897 -145 785 267 130 51 chr18 17900146 17900456 -68777092 + L1ME3A LINE L1 5657 6018 -152 1952 151 7 10 chr18 17900456 17900748 -68776800 + AluSx SINE Alu 1 291 -21 785 267 130 51 chr18 17900748 17900905 -68776643 + L1ME3A LINE L1 6018 6161 -9 209 182 0 0 chr18 17900934 17900967 -68776581 + (CA)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr18 17901212 17901233 -68776315 + AT_rich Low_complexity Low_complexity 1 21 0 2286 100 3 3 chr18 17901371 17901672 -68775876 - AluSc SINE Alu -8 301 1 21 0 0 0 chr18 17901673 17901694 -68775854 + AT_rich Low_complexity Low_complexity 1 21 0 401 340 76 35 chr18 17901799 17902222 -68775326 - MLT1L LTR MaLR -2 613 174 1867 155 3 3 chr18 17902680 17902971 -68774577 - AluSx SINE Alu -21 291 1 240 291 50 57 chr18 17903019 17903160 -68774388 - MLT1L LTR MaLR -458 157 18 21 36 0 0 chr18 17903265 17903293 -68774255 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr18 17904465 17904494 -68773054 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18 17904873 17904894 -68772654 + AT_rich Low_complexity Low_complexity 1 21 0 211 333 0 0 chr18 17905402 17905450 -68772098 - L2 LINE L2 -15 3257 3210 472 133 0 13 chr18 17905488 17905563 -68771985 + MADE1 DNA Mariner 2 75 -5 453 217 0 0 chr18 17906168 17906251 -68771297 - MER5B DNA MER1_type -4 174 92 888 221 99 6 chr18 17907044 17907216 -68770332 - MER5A DNA MER1_type -1 188 1 1884 231 118 32 chr18 17908396 17909225 -68768323 + LTR1B LTR ERV1 1 826 0 452 248 9 0 chr18 17909481 17909594 -68767954 - LTR43 LTR ERV1 -306 296 183 30 0 0 0 chr18 17909866 17909896 -68767652 + AT_rich Low_complexity Low_complexity 1 30 0 1894 112 8 4 chr18 17910185 17910445 -68767103 - AluSq SINE Alu 0 313 46 1752 184 59 6 chr18 17910824 17911161 -68766387 - MLT1A1 LTR MaLR 0 365 11 2223 119 0 0 chr18 17911279 17911572 -68765976 - AluSg SINE Alu -17 293 1 488 274 34 29 chr18 17911706 17911881 -68765667 + LTR16A1 LTR ERVL 282 457 0 24 0 0 0 chr18 17911903 17911927 -68765621 + AT_rich Low_complexity Low_complexity 1 24 0 877 164 0 0 chr18 17911927 17912055 -68765493 - FLAM_C SINE Alu -15 128 1 297 365 0 7 chr18 17912638 17912775 -68764773 - HERV16 LTR ERVL -4335 661 526 2155 89 7 0 chr18 17912832 17913143 -68764405 - AluSp SINE Alu 0 323 11 1522 194 153 22 chr18 17913411 17913824 -68763724 - MLT1C LTR MaLR 0 467 1 591 253 161 8 chr18 17914008 17914257 -68763291 - LTR16A1 LTR ERVL -3 454 168 219 235 20 0 chr18 17915247 17915298 -68762250 - MIR SINE MIR -76 132 81 21 0 0 0 chr18 17915298 17915319 -68762229 + AT_rich Low_complexity Low_complexity 1 21 0 617 76 0 0 chr18 17967615 17967694 -68709854 + AluSg/x SINE Alu 218 296 -13 1421 224 13 7 chr18 17967730 17968034 -68709514 - AluJo SINE Alu -6 306 1 776 201 0 7 chr18 17968036 17968175 -68709373 - AluJo SINE Alu -174 138 1 718 214 31 6 chr18 17968307 17968466 -68709082 - FRAM SINE Alu -13 163 1 26 0 0 0 chr18 17968671 17968697 -68708851 + AT_rich Low_complexity Low_complexity 1 26 0 4152 232 37 28 chr18 17969685 17969909 -68707639 - L1P LINE L1 -1033 5113 4893 2058 128 10 0 chr18 17969909 17970207 -68707341 - AluSq SINE Alu -9 304 4 4152 232 37 28 chr18 17970207 17970280 -68707268 - L1P LINE L1 -1253 4893 4822 7439 26 8 14 chr18 17970280 17971419 -68706129 - L1PA3 LINE L1 0 6155 5043 4152 232 37 28 chr18 17971419 17972275 -68705273 - L1P LINE L1 -1324 4822 3948 466 113 0 14 chr18 17972277 17972348 -68705200 - L1P LINE L1 -2325 3821 3752 209 184 0 26 chr18 17972353 17972429 -68705119 + (TATATG)n Simple_repeat Simple_repeat 5 78 0 506 111 0 74 chr18 17972440 17972630 -68704918 + (TATATG)n Simple_repeat Simple_repeat 5 180 0 242 220 0 0 chr18 17972631 17972690 -68704858 + (TA)n Simple_repeat Simple_repeat 2 60 0 1798 234 66 45 chr18 17972921 17973092 -68704456 + L1MB7 LINE L1 5222 5388 -790 1593 164 3 35 chr18 17973092 17973379 -68704169 + AluJb SINE Alu 22 299 -13 1798 234 66 45 chr18 17973379 17973899 -68703649 + L1MB7 LINE L1 5388 5926 -252 444 219 0 93 chr18 17973914 17974065 -68703483 + L1MB7 LINE L1 6039 6175 -9 1450 223 24 14 chr18 17975934 17976225 -68701323 + AluJo SINE Alu 1 294 -8 974 209 138 18 chr18 17976345 17976627 -68700921 + MER33 DNA MER1_type 8 323 -1 423 250 56 9 chr18 17977269 17977377 -68700171 - Tigger1 DNA MER2_type 0 2418 2306 393 213 25 0 chr18 17977374 17977454 -68700094 - Tigger1 DNA MER2_type -370 2048 1967 * 10940 139 26 30 chr18 17977554 17977778 -68699770 - Tigger1 DNA MER2_type -449 1969 1746 2211 109 13 0 chr18 17977778 17978081 -68699467 - AluSp SINE Alu -6 307 1 10940 139 26 30 chr18 17978081 17978364 -68699184 - Tigger1 DNA MER2_type -672 1746 1463 2071 117 3 0 chr18 17978364 17978654 -68698894 - AluSg SINE Alu -19 291 1 10940 139 26 30 chr18 17978654 17978688 -68698860 - Tigger1 DNA MER2_type -955 1463 1430 1238 209 13 40 chr18 17978688 17978989 -68698559 + AluJb SINE Alu 1 293 -19 10940 139 26 30 chr18 17978989 17980397 -68697151 - Tigger1 DNA MER2_type -988 1430 26 1765 152 24 17 chr18 17980976 17981265 -68696283 + AluSx SINE Alu 1 291 -21 1790 142 7 40 chr18 17981609 17981735 -68695813 + AluSg SINE Alu 3 132 -178 186 43 0 0 chr18 17981735 17981758 -68695790 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1790 142 7 40 chr18 17981758 17981933 -68695615 + AluSg SINE Alu 132 294 -16 289 279 76 38 chr18 17982444 17982602 -68694946 - L1ME LINE L1 -313 5808 5645 4602 152 24 57 chr18 17982932 17983274 -68694274 - L1MA5A LINE L1 -5 6292 5940 2183 99 10 10 chr18 17983274 17983586 -68693962 - AluSx SINE Alu 0 312 1 4602 152 24 57 chr18 17983586 17984040 -68693508 - L1MA5A LINE L1 -357 5940 5529 2271 77 0 0 chr18 17984040 17984326 -68693222 + AluY SINE Alu 13 298 -13 4602 152 24 57 chr18 17984326 17984463 -68693085 - L1MA5A LINE L1 -768 5529 5389 393 162 63 54 chr18 17984463 17984574 -68692974 + Charlie4 DNA MER1_type 1825 1936 -25 255 31 0 0 chr18 17984589 17984621 -68692927 + (CA)n Simple_repeat Simple_repeat 1 32 0 332 328 26 9 chr18 17984644 17984760 -68692788 + MIR SINE MIR 16 133 -129 241 305 25 84 chr18 17984770 17984973 -68692575 + Charlie8 DNA MER1_type 1 191 -2226 335 360 138 25 chr18 17985565 17985921 -68691627 - L2 LINE L2 -8 3264 2869 290 333 39 114 chr18 17986828 17987285 -68690263 + L2 LINE L2 2844 3266 -6 191 388 27 14 chr18 17987435 17987582 -68689966 - L2 LINE L2 -336 2977 2829 329 322 89 23 chr18 17987631 17988025 -68689523 + L1MC4a LINE L1 5596 6015 -1793 795 114 0 0 chr18 17988560 17988674 -68688874 + L1PA16 LINE L1 6044 6157 -9 2226 119 44 3 chr18 17988678 17989038 -68688510 - L1MA4 LINE L1 -26 6274 5900 3642 164 11 18 chr18 17989110 17989767 -68687781 + L1MA4 LINE L1 5490 6141 -159 192 182 0 0 chr18 17989800 17989844 -68687704 + (TA)n Simple_repeat Simple_repeat 1 44 0 634 209 18 18 chr18 17989884 17990047 -68687501 + L1ME3A LINE L1 4539 4701 -1445 2490 160 0 14 chr18 17990169 17990613 -68686935 + L1PA15 LINE L1 5723 6160 -5 1575 266 76 46 chr18 17990815 17991803 -68685745 + L1ME3A LINE L1 4967 5987 -183 1517 259 55 28 chr18 17991926 17992398 -68685150 + MLT1D LTR MaLR 21 505 0 251 200 29 57 chr18 17992411 17992481 -68685067 + L1ME3A LINE L1 6098 6165 -5 240 390 10 0 chr18 17992531 17992631 -68684917 - L2 LINE L2 -9 3304 3204 2065 306 17 28 chr18 17993180 17993887 -68683661 + L1M2 LINE L1 402 1100 -6466 8056 210 83 24 chr18 17994081 17996859 -68680689 + L1M2 LINE L1 2804 5752 -1813 742 72 0 27 chr18 17996859 17996970 -68680578 - L1PA13 LINE L1 -2 6161 6054 1165 163 41 0 chr18 17996976 17997197 -68680351 + L1MA6 LINE L1 6071 6300 0 303 303 62 19 chr18 17997215 17997377 -68680171 + MLT1J2 LTR MaLR 280 448 -2 233 292 56 11 chr18 17997823 17997912 -68679636 - L2 LINE L2 -940 2374 2282 561 294 136 27 chr18 17998197 17998527 -68679021 - LTR33 LTR ERVL -123 398 33 253 277 0 12 chr18 17999391 17999474 -68678074 - MLT1H LTR MaLR 0 549 468 601 204 30 58 chr18 17999666 17999869 -68677679 - MER63 DNA MER1_type -9 1679 1 552 196 45 8 chr18 18000023 18000156 -68677392 + L1MD2 LINE L1 5797 5934 -425 314 326 39 16 chr18 18000234 18000363 -68677185 - L2 LINE L2 0 3272 3141 466 198 12 0 chr18 18000785 18000866 -68676682 + MER2 DNA MER2_type 6 87 -258 247 241 138 0 chr18 18001036 18001123 -68676425 + L1ME LINE L1 5556 5654 -467 372 43 0 0 chr18 18001162 18001208 -68676340 + (TA)n Simple_repeat Simple_repeat 2 47 0 26 0 0 0 chr18 18001341 18001367 -68676181 + AT_rich Low_complexity Low_complexity 1 26 0 381 290 41 76 chr18 18001405 18001719 -68675829 + L1M4 LINE L1 3613 3915 -2231 2571 159 20 56 chr18 18002054 18002606 -68674942 - L1PA16 LINE L1 0 6166 5635 562 241 25 12 chr18 18002642 18002804 -68674744 + L1MB7 LINE L1 2 165 -6377 431 213 89 35 chr18 18002818 18002987 -68674561 + L1MB7 LINE L1 1984 2161 -4485 554 237 5 39 chr18 18003016 18003223 -68674325 + L1MB7 LINE L1 2281 2480 -4166 2656 225 40 28 chr18 18003239 18003573 -68673975 + L1MB7 LINE L1 2534 2863 -3781 348 83 0 0 chr18 18003573 18003621 -68673927 + (TA)n Simple_repeat Simple_repeat 1 48 0 1974 25 14 79 chr18 18003621 18003901 -68673647 - L1PA4 LINE L1 -16 6139 5878 2656 225 40 28 chr18 18003901 18004489 -68673059 + L1MB7 LINE L1 2862 3465 -3179 * 3676 202 43 24 chr18 18004484 18005579 -68671969 + L1MB7 LINE L1 5543 6656 -26 279 0 0 0 chr18 18005944 18005975 -68671573 + (CAA)n Simple_repeat Simple_repeat 3 33 0 2221 97 3 10 chr18 18006176 18006464 -68671084 + AluSp SINE Alu 4 291 -58 608 13 26 0 chr18 18006464 18006540 -68671008 + (CATAA)n Simple_repeat Simple_repeat 2 79 0 2221 97 3 10 chr18 18006540 18006599 -68670949 + AluSp SINE Alu 291 349 0 22 0 0 0 chr18 18006700 18006722 -68670826 + AT_rich Low_complexity Low_complexity 1 22 0 439 287 199 13 chr18 18006942 18007395 -68670153 + L1MEc LINE L1 942 1369 -4846 580 286 12 24 chr18 18007565 18007817 -68669731 + L1MEc LINE L1 2312 2560 -3655 1513 211 31 29 chr18 18007840 18008253 -68669295 + L1MC3 LINE L1 5650 6063 -1722 202 91 45 23 chr18 18008996 18009040 -68668508 + (CAGAGA)n Simple_repeat Simple_repeat 1 45 0 23 33 0 0 chr18 18009191 18009221 -68668327 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr18 18009419 18009444 -68668104 + AT_rich Low_complexity Low_complexity 1 25 0 627 155 0 70 chr18 18009444 18009573 -68667975 - L1PB3 LINE L1 0 6154 6035 23 0 0 0 chr18 18009778 18009801 -68667747 + AT_rich Low_complexity Low_complexity 1 23 0 238 261 46 0 chr18 18011289 18011354 -68666194 + L2 LINE L2 3204 3271 -1 1576 169 52 43 chr18 18011971 18012297 -68665251 + MER44D DNA MER2_type 5 603 -6 923 242 85 7 chr18 18013138 18013431 -68664117 - L1ME3A LINE L1 -1 6169 5854 1029 246 41 41 chr18 18015058 18015223 -68662325 + L1 LINE L1 1996 2160 -5405 1736 189 0 10 chr18 18015223 18015536 -68662012 + AluSx SINE Alu 3 312 0 1029 246 41 41 chr18 18015536 18015764 -68661784 + L1 LINE L1 2159 2389 -5176 * 4636 200 37 62 chr18 18015747 18016405 -68661143 + L1 LINE L1 5405 6011 -1554 2071 125 0 0 chr18 18016405 18016700 -68660848 + AluSg SINE Alu 1 295 -15 4636 200 37 62 chr18 18016700 18017423 -68660125 + L1 LINE L1 6011 6751 -814 350 296 30 12 chr18 18017999 18018168 -68659380 + CT-rich Low_complexity Low_complexity 2 173 0 444 244 75 72 chr18 18019536 18020001 -68657547 + HSREP522 Satellite telomeric 1 466 -160 398 250 0 24 chr18 18021145 18021269 -68656279 + CT-rich Low_complexity Low_complexity 3 123 0 1442 184 22 4 chr18 18022504 18022775 -68654773 + LOR1-int LTR ERV1 2079 2354 -3592 662 194 58 26 chr18 18022774 18022955 -68654593 + LOR1-int LTR ERV1 1839 2028 -6092 * 1548 164 14 11 chr18 18022955 18023230 -68654318 - AluSx SINE Alu -36 276 1 3443 206 70 37 chr18 18023241 18024434 -68653114 - L1 LINE L1 -2865 4700 3460 765 210 43 86 chr18 18024469 18024841 -68652707 - L1 LINE L1 -4068 3497 3142 441 36 0 0 chr18 18024896 18024951 -68652597 + (TA)n Simple_repeat Simple_repeat 2 56 0 207 0 0 0 chr18 18024950 18024973 -68652575 + (CA)n Simple_repeat Simple_repeat 2 24 0 * 258 314 0 23 chr18 18024994 18025080 -68652468 + L2 LINE L2 3188 3271 -1 5963 111 22 33 chr18 18025170 18026201 -68651347 - L1PA12 LINE L1 -2 6166 5132 382 293 45 0 chr18 18026204 18026361 -68651187 + L1M4 LINE L1 2386 2549 -3597 * 2413 204 61 5 chr18 18026357 18026930 -68650618 + L1PB2 LINE L1 3795 4399 -1747 659 144 35 12 chr18 18026930 18027103 -68650445 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 463 167 9 44 chr18 18027103 18027217 -68650331 + (TATATG)n Simple_repeat Simple_repeat 5 114 0 590 153 40 17 chr18 18027232 18027408 -68650140 + (TA)n Simple_repeat Simple_repeat 1 180 0 586 110 33 44 chr18 18027372 18027554 -68649994 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 * 638 151 32 21 chr18 18027561 18027888 -68649660 + (TA)n Simple_repeat Simple_repeat 1 330 0 5298 170 30 16 chr18 18027907 18029274 -68648274 + L1PB2 LINE L1 4430 5776 -375 2057 134 0 0 chr18 18029274 18029557 -68647991 + AluSq SINE Alu 1 283 -30 267 31 0 0 chr18 18029560 18029592 -68647956 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 5298 170 30 16 chr18 18029592 18029913 -68647635 + L1PB2 LINE L1 5777 6147 -4 267 297 88 28 chr18 18029912 18030232 -68647316 + L1M4 LINE L1 2541 2879 -3267 * 450 291 58 4 chr18 18030355 18030616 -68646932 - L1M4 LINE L1 -2982 3164 2890 414 0 0 0 chr18 18031082 18031128 -68646420 + (TG)n Simple_repeat Simple_repeat 2 47 0 1876 73 0 11 chr18 18031405 18031666 -68645882 - AluY SINE Alu 0 311 54 2357 92 3 0 chr18 18032204 18032508 -68645040 - AluY SINE Alu -6 305 1 846 212 23 9 chr18 18032518 18032735 -68644813 - L1MC3 LINE L1 0 7785 7566 607 261 59 25 chr18 18032860 18033063 -68644485 + MIR SINE MIR 53 262 0 359 108 231 0 chr18 18034468 18034533 -68643015 + MADE1 DNA Mariner 1 80 0 2255 114 0 16 chr18 18036640 18036957 -68640591 - AluSx SINE Alu 0 312 1 219 36 0 0 chr18 18037135 18037163 -68640385 + (TG)n Simple_repeat Simple_repeat 1 28 0 924 98 5 152 chr18 18038327 18038511 -68639037 + AluY SINE Alu 1 157 -154 769 277 93 30 chr18 18038511 18038908 -68638640 + L1M4 LINE L1 3903 4324 -1822 2267 67 6 61 chr18 18039084 18039413 -68638135 - AluY SINE Alu 0 311 1 1029 99 0 25 chr18 18039413 18039575 -68637973 - L1P4 LINE L1 -671 5490 5333 3083 126 11 6 chr18 18040089 18040559 -68636989 - MER84 LTR ERVI 0 507 36 233 374 0 18 chr18 18040580 18040751 -68636797 + CT-rich Low_complexity Low_complexity 3 170 0 36 77 0 0 chr18 18040887 18040965 -68636583 + AT_rich Low_complexity Low_complexity 1 78 0 887 216 38 14 chr18 18041205 18041418 -68636130 - MER96B DNA MER1_type? -23 394 177 274 175 23 5 chr18 18041413 18041424 -68636124 - MLT1D LTR MaLR -398 107 98 * 12830 88 8 5 chr18 18041424 18044028 -68633520 - L1PA7 LINE L1 -3 6151 3542 274 175 23 5 chr18 18044028 18044099 -68633449 - MLT1D LTR MaLR -407 98 57 2511 172 31 8 chr18 18044235 18045111 -68632437 + L1MA4A LINE L1 4853 5747 -556 1375 173 75 19 chr18 18045467 18045892 -68631656 + L1MA4A LINE L1 5771 6280 -23 231 206 41 0 chr18 18046249 18046322 -68631226 + (TTATA)n Simple_repeat Simple_repeat 4 79 0 207 262 47 13 chr18 18046254 18046403 -68631145 + (TTTAA)n Simple_repeat Simple_repeat 2 155 0 * 313 226 32 21 chr18 18046553 18046646 -68630902 - L1ME1 LINE L1 -59 6107 6014 1502 173 121 0 chr18 18046826 18047132 -68630416 - MER2 DNA MER2_type 0 344 2 2217 119 0 0 chr18 18048531 18048825 -68628723 - AluSg SINE Alu -16 294 1 2041 107 3 52 chr18 18048960 18049268 -68628280 - AluSx SINE Alu -19 293 1 23 33 0 0 chr18 18049397 18049427 -68628121 + AT_rich Low_complexity Low_complexity 1 30 0 1517 164 4 39 chr18 18049945 18050225 -68627323 - AluSx SINE Alu -12 300 31 410 263 0 0 chr18 18050412 18050488 -68627060 + MER2 DNA MER2_type 270 345 0 241 336 109 8 chr18 18050695 18050823 -68626725 - L2 LINE L2 -817 2497 2357 23 0 0 0 chr18 18051637 18051660 -68625888 + AT_rich Low_complexity Low_complexity 1 23 0 611 182 0 0 chr18 18052013 18052112 -68625436 + AluJb SINE Alu 184 282 -30 31 26 0 0 chr18 18052112 18052150 -68625398 + AT_rich Low_complexity Low_complexity 1 38 0 186 214 89 0 chr18 18052310 18052366 -68625182 + MIR SINE MIR 137 197 -65 1243 239 21 3 chr18 18053057 18053346 -68624202 - AluJo SINE Alu -14 298 5 429 147 31 124 chr18 18053352 18053481 -68624067 - MLT1D LTR MaLR -297 208 92 1455 166 3 83 chr18 18053689 18054015 -68623533 - AluJb SINE Alu -10 302 3 1657 92 110 26 chr18 18054032 18054305 -68623243 - L1PA13 LINE L1 -7 6156 5861 728 256 0 0 chr18 18054702 18054858 -68622690 + MER6B DNA MER2_type 1 156 -54 314 348 127 25 chr18 18055626 18055784 -68621764 + L2 LINE L2 224 397 -2917 356 300 148 29 chr18 18056166 18056612 -68620936 + L1M4 LINE L1 4177 4675 -1471 22 80 0 0 chr18 18057175 18057225 -68620323 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr18 18057832 18057855 -68619693 + AT_rich Low_complexity Low_complexity 1 23 0 188 306 118 12 chr18 18060448 18060533 -68617015 + MIR SINE MIR 48 141 -67 16745 37 5 1 chr18 18061162 18063321 -68614227 - L1P LINE L1 -1048 5098 2932 6584 23 16 0 chr18 18063322 18064237 -68613311 + L1PA3 LINE L1 5141 6071 -84 230 333 13 0 chr18 18064456 18064531 -68613017 - L2 LINE L2 -9 3304 3229 371 340 61 20 chr18 18064596 18064793 -68612755 + MIR SINE MIR 57 261 -1 210 325 57 24 chr18 18065840 18065963 -68611585 + L2 LINE L2 2464 2590 -724 5788 168 3 0 chr18 18065985 18067055 -68610493 - L1P LINE L1 -1209 4937 3865 255 241 81 0 chr18 18067059 18067146 -68610402 + Charlie4a DNA MER1_type 246 339 -169 221 331 123 6 chr18 18068442 18068605 -68608943 - MIR SINE MIR -37 225 44 2225 60 6 0 chr18 18068874 18069189 -68608359 + Harlequin LTR ERV1 2261 2577 -4319 * 11801 209 35 58 chr18 18069165 18072187 -68605361 + Harlequin LTR ERV1 3695 6648 -1 2559 149 50 28 chr18 18072234 18072769 -68604779 + LTR10A LTR ERV1 1 547 -62 912 230 14 19 chr18 18072860 18073073 -68604475 - MER58C DNA MER1_type 0 215 4 321 252 54 23 chr18 18073184 18073381 -68604167 - L1ME2 LINE L1 -126 6040 5843 3819 103 20 2 chr18 18073385 18073927 -68603621 - MER41A LTR ERV1 -2 552 1 3419 113 6 2 chr18 18073927 18074430 -68603118 - MER41A-int LTR ERV1 -3 5943 5439 436 262 67 20 chr18 18074430 18074579 -68602969 - MER31B LTR ERV1 -226 240 85 1966 234 54 6 chr18 18074596 18075277 -68602271 + L1M4 LINE L1 2314 3027 -3119 4935 228 19 13 chr18 18076614 18078073 -68599475 + L1PBb LINE L1 777 2333 -3870 464 136 0 0 chr18 18078074 18078140 -68599408 - AluS SINE Alu -247 66 1 231 88 0 0 chr18 18078458 18078492 -68599056 + (TATG)n Simple_repeat Simple_repeat 2 35 0 1994 141 0 0 chr18 18078492 18078776 -68598772 - AluSx SINE Alu -28 284 1 728 176 24 6 chr18 18078878 18079048 -68598500 - L1MB2 LINE L1 -1 6170 5998 30 45 0 0 chr18 18079238 18079282 -68598266 + AT_rich Low_complexity Low_complexity 1 44 0 29 60 0 0 chr18 18080754 18080804 -68596744 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr18 18086487 18086508 -68591040 + AT_rich Low_complexity Low_complexity 1 21 0 1569 211 3 10 chr18 18086745 18087048 -68590500 - AluSx SINE Alu -11 301 1 2008 142 3 0 chr18 18088225 18088528 -68589020 + AluSx SINE Alu 1 304 -8 2398 280 60 12 chr18 18088575 18089852 -68587696 + L1M4 LINE L1 3174 4511 -1635 1591 283 70 75 chr18 18089850 18091291 -68586257 + L1 LINE L1 17 2166 -5399 * 2139 143 0 0 chr18 18091291 18091591 -68585957 + AluSx SINE Alu 3 302 -10 1591 283 70 75 chr18 18091591 18091814 -68585734 + L1 LINE L1 2166 2389 -5176 * 4282 198 38 62 chr18 18091797 18092454 -68585094 + L1 LINE L1 5405 6076 -1489 2144 124 0 0 chr18 18092454 18092752 -68584796 + AluSg SINE Alu 1 298 -12 4282 198 38 62 chr18 18092752 18093473 -68584075 + L1 LINE L1 6076 6751 -814 398 238 66 27 chr18 18095536 18095818 -68581730 + HSREP522 Satellite telomeric 1 292 -339 387 250 0 24 chr18 18096997 18097121 -68580427 + CT-rich Low_complexity Low_complexity 3 123 0 300 283 43 29 chr18 18097608 18097746 -68579802 - L1MEc LINE L1 -2806 4759 4620 1330 186 22 4 chr18 18098359 18098628 -68578920 + LOR1-int LTR ERV1 2081 2354 -3592 689 185 36 21 chr18 18098627 18098812 -68578736 + LOR1-int LTR ERV1 1839 2020 -3566 * 1634 157 15 7 chr18 18098812 18099086 -68578462 - AluSx SINE Alu -36 276 1 3282 193 59 90 chr18 18099097 18100700 -68576848 - L1MEc LINE L1 -2865 4700 3142 276 77 0 0 chr18 18100755 18100794 -68576754 + (TA)n Simple_repeat Simple_repeat 1 39 0 247 326 0 23 chr18 18100825 18100911 -68576637 + L2 LINE L2 3188 3271 -1 5850 113 16 24 chr18 18100999 18102137 -68575411 - L1PA12 LINE L1 0 6168 5026 2739 179 5 4 chr18 18102139 18102691 -68574857 + L1PA12 LINE L1 4463 5015 -1131 414 291 17 23 chr18 18102827 18102999 -68574549 - L1MEc LINE L1 -6170 1576 1406 455 290 39 0 chr18 18103043 18103250 -68574298 + L1M4 LINE L1 2335 2549 -3597 * 2241 208 56 5 chr18 18103246 18103822 -68573726 + L1PB2 LINE L1 3795 4399 -1747 594 173 29 6 chr18 18103822 18103995 -68573553 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 182 220 17 0 chr18 18104008 18104067 -68573481 + (TA)n Simple_repeat Simple_repeat 2 61 0 738 150 52 0 chr18 18104090 18104344 -68573204 + (TA)n Simple_repeat Simple_repeat 1 267 0 604 138 63 6 chr18 18104344 18104680 -68572868 + (CATATA)n Simple_repeat Simple_repeat 1 355 0 586 173 40 6 chr18 18104659 18104832 -68572716 + (TA)n Simple_repeat Simple_repeat 2 180 0 * 5115 165 34 19 chr18 18104856 18106222 -68571326 + L1PB2 LINE L1 4430 5774 -377 2067 138 0 0 chr18 18106222 18106505 -68571043 + AluSq SINE Alu 1 283 -30 267 31 0 0 chr18 18106508 18106540 -68571008 + (GAAAA)n Simple_repeat Simple_repeat 2 33 0 5115 165 34 19 chr18 18106540 18106861 -68570687 + L1PB2 LINE L1 5775 6147 -4 229 291 67 25 chr18 18106898 18107180 -68570368 + L1M4 LINE L1 2586 2879 -3267 392 294 53 4 chr18 18107307 18107569 -68569979 - L1M4 LINE L1 -2982 3164 2890 332 217 75 0 chr18 18107621 18107741 -68569807 + L1MC4 LINE L1 7914 8042 0 2338 110 0 0 chr18 18108210 18108519 -68569029 + AluSg1 SINE Alu 1 309 0 2073 131 7 3 chr18 18108812 18109117 -68568431 - AluSx SINE Alu -6 306 1 2211 91 30 0 chr18 18109425 18109722 -68567826 - AluY SINE Alu -5 306 1 22 0 0 0 chr18 18110441 18110463 -68567085 + AT_rich Low_complexity Low_complexity 1 22 0 3671 117 11 9 chr18 18111605 18112168 -68565380 - LTR6A LTR ERV1 0 564 1 552 250 222 0 chr18 18112505 18112685 -68564863 + MER58A DNA MER1_type 1 220 -4 201 321 161 0 chr18 18113177 18113258 -68564290 - MIR SINE MIR -51 211 118 25 65 0 0 chr18 18114782 18114828 -68562720 + AT_rich Low_complexity Low_complexity 1 46 0 24 67 0 0 chr18 18115016 18115061 -68562487 + AT_rich Low_complexity Low_complexity 1 45 0 23 54 0 0 chr18 18116420 18116457 -68561091 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr18 18116815 18116843 -68560705 + AT_rich Low_complexity Low_complexity 1 28 0 599 375 25 12 chr18 18116954 18117279 -68560269 + LTR16A LTR ERVL 110 438 -12 225 284 99 62 chr18 18117816 18117899 -68559649 - MIR SINE MIR -66 196 118 2393 172 24 0 chr18 18117899 18118317 -68559231 + MSTA LTR MaLR 1 428 0 225 284 99 62 chr18 18118317 18118395 -68559153 - MIR SINE MIR -144 118 29 242 143 20 0 chr18 18118508 18118557 -68558991 + GA-rich Low_complexity Low_complexity 2 51 0 324 64 0 0 chr18 18118718 18118765 -68558783 + (TG)n Simple_repeat Simple_repeat 2 48 0 182 203 0 47 chr18 18118824 18118888 -68558660 + CT-rich Low_complexity Low_complexity 2 62 0 2071 143 0 0 chr18 18119856 18120156 -68557392 - AluSc SINE Alu -9 300 1 2328 87 0 3 chr18 18120191 18120490 -68557058 - AluY SINE Alu -13 298 1 621 140 53 0 chr18 18120491 18120605 -68556943 - L1MB4 LINE L1 -241 5939 5820 522 0 0 0 chr18 18120617 18120675 -68556873 + (TA)n Simple_repeat Simple_repeat 2 59 0 691 215 0 0 chr18 18120675 18120796 -68556752 - FLAM_C SINE Alu -22 121 1 1579 207 35 3 chr18 18120798 18121136 -68556412 - L1MB4 LINE L1 -355 5828 5480 2065 130 0 10 chr18 18121712 18122013 -68555535 - AluSg SINE Alu -12 298 1 953 235 113 34 chr18 18122294 18122578 -68554970 - MER21B LTR ERV1 -57 806 487 1605 187 3 23 chr18 18122578 18122878 -68554670 - AluJo SINE Alu -13 299 6 953 235 113 34 chr18 18122878 18122946 -68554602 - MER21B LTR ERV1 -376 487 426 1062 191 0 22 chr18 18122949 18123127 -68554421 + AluJb SINE Alu 2 175 -137 1652 176 0 23 chr18 18123382 18123684 -68553864 - AluJo SINE Alu -7 305 11 2184 126 3 3 chr18 18123699 18124008 -68553540 - AluSx SINE Alu -3 309 1 2228 213 38 58 chr18 18124010 18124075 -68553473 - L1MB8 LINE L1 -3 6175 6110 1502 222 0 0 chr18 18124075 18124381 -68553167 + AluJb SINE Alu 1 306 -6 2228 213 38 58 chr18 18124381 18124949 -68552599 - L1MB8 LINE L1 -68 6110 5555 614 208 0 54 chr18 18124949 18125098 -68552450 + FLAM_A SINE Alu 1 141 -1 420 206 0 0 chr18 18125101 18125174 -68552374 - L1MB8 LINE L1 -613 5571 5499 1625 197 3 10 chr18 18125175 18125474 -68552074 - AluJb SINE Alu -15 297 1 182 91 30 0 chr18 18125694 18125727 -68551821 + T-rich Low_complexity Low_complexity 3 36 0 480 138 11 0 chr18 18125745 18125839 -68551709 - L1PB1 LINE L1 -1 6150 6056 32 26 0 0 chr18 18125845 18125884 -68551664 + AT_rich Low_complexity Low_complexity 1 39 0 1968 143 14 0 chr18 18126158 18126458 -68551090 - AluSx SINE Alu 0 304 1 2259 104 0 7 chr18 18126729 18127027 -68550521 + AluSc SINE Alu 1 296 -13 1018 133 128 24 chr18 18127572 18127783 -68549765 - MER6 DNA MER2_type 0 865 633 1419 148 124 16 chr18 18127783 18128074 -68549474 + AluSx SINE Alu 1 319 0 1779 119 4 32 chr18 18128284 18128561 -68548987 - AluSx SINE Alu -7 305 37 1341 287 79 13 chr18 18128623 18129368 -68548180 - L1M4 LINE L1 -1856 4290 3497 30 0 0 0 chr18 18129403 18129433 -68548115 + AT_rich Low_complexity Low_complexity 1 30 0 357 43 0 0 chr18 18129899 18129946 -68547602 + (CA)n Simple_repeat Simple_repeat 2 48 0 2842 230 51 51 chr18 18130330 18130497 -68547051 + L1MA9 LINE L1 4251 4417 -1753 263 128 0 0 chr18 18130497 18130536 -68547012 - MADE1 DNA Mariner -41 39 1 2842 230 51 51 chr18 18130536 18130680 -68546868 + L1MA9 LINE L1 4417 4560 -1610 2237 121 0 0 chr18 18130680 18130987 -68546561 + AluSc SINE Alu 1 307 -2 2842 230 51 51 chr18 18130987 18132116 -68545432 + L1MA9 LINE L1 4560 5727 -443 1915 127 7 0 chr18 18132117 18132392 -68545156 + AluSg SINE Alu 1 277 -33 713 261 68 0 chr18 18132392 18132553 -68544995 + AluJo SINE Alu 87 258 -54 2020 190 72 16 chr18 18132575 18132602 -68544946 + L1MA9 LINE L1 5766 5790 -522 303 28 0 0 chr18 18132602 18132638 -68544910 + (TG)n Simple_repeat Simple_repeat 1 36 0 2020 190 72 16 chr18 18132638 18133109 -68544439 + L1MA9 LINE L1 5790 6292 -20 1958 114 52 0 chr18 18133382 18133671 -68543877 + AluSg SINE Alu 1 304 -6 183 80 0 0 chr18 18134468 18134493 -68543055 + (A)n Simple_repeat Simple_repeat 1 25 0 2268 100 0 0 chr18 18134856 18135156 -68542392 - AluY SINE Alu -11 300 1 465 236 16 16 chr18 18135896 18136019 -68541529 - L1MCa LINE L1 -5731 695 573 1616 244 44 22 chr18 18136084 18136535 -68541013 - L1MCa LINE L1 -5827 599 139 1868 138 0 64 chr18 18136535 18136652 -68540896 - AluSx SINE Alu -6 306 183 7618 26 0 18 chr18 18136652 18138354 -68539194 - L1PA3 LINE L1 0 6155 4471 1868 138 0 64 chr18 18138354 18138563 -68538985 - AluSx SINE Alu -129 183 1 2365 167 47 2 chr18 18138568 18139058 -68538490 - L1MA6 LINE L1 0 6300 5789 306 210 30 19 chr18 18139153 18139259 -68538289 - L1MA6 LINE L1 -388 5768 5703 10880 246 45 55 chr18 18139301 18140116 -68537432 - L1P4 LINE L1 -444 7159 6338 2159 105 10 0 chr18 18140116 18140411 -68537137 - AluSq SINE Alu -12 301 4 10880 246 45 55 chr18 18140411 18140484 -68537064 - L1P4 LINE L1 -1265 6338 6266 7559 26 0 8 chr18 18140484 18141623 -68535925 - L1PA3 LINE L1 0 6155 5043 10880 246 45 55 chr18 18141623 18142870 -68534678 - L1P4 LINE L1 -1337 6266 5008 2068 135 0 3 chr18 18142870 18143167 -68534381 - AluSq SINE Alu -17 296 1 10880 246 45 55 chr18 18143167 18143778 -68533770 - L1P4 LINE L1 -2595 5008 4393 1942 149 24 0 chr18 18143778 18144074 -68533474 + AluSx SINE Alu 3 305 -7 10880 246 45 55 chr18 18144074 18147579 -68529969 - L1P4 LINE L1 -3210 4393 116 289 170 0 0 chr18 18147599 18147652 -68529896 - L1PB4 LINE L1 -13 6143 6091 * 1759 189 19 68 chr18 18147644 18147703 -68529845 - L1MB3 LINE L1 -309 5871 5811 741 171 0 0 chr18 18147703 18147820 -68529728 - FLAM_C SINE Alu -16 117 1 1759 189 19 68 chr18 18147820 18148172 -68529376 - L1MB3 LINE L1 -369 5811 5480 1745 174 24 0 chr18 18149316 18149614 -68527934 - AluSx SINE Alu -7 305 1 2441 70 0 7 chr18 18149784 18150083 -68527465 + AluY SINE Alu 1 297 -14 1086 219 17 9 chr18 18150132 18150365 -68527183 - AluJo SINE Alu -77 235 1 753 200 0 0 chr18 18150381 18150506 -68527042 - FLAM_C SINE Alu -8 125 1 697 211 45 6 chr18 18150638 18150794 -68526754 - AluJb SINE Alu -14 298 137 26 0 0 0 chr18 18150999 18151025 -68526523 + AT_rich Low_complexity Low_complexity 1 26 0 27 29 0 0 chr18 18151874 18151908 -68525640 + AT_rich Low_complexity Low_complexity 1 34 0 263 259 138 35 chr18 18152215 18152389 -68525159 + L1ME LINE L1 5645 5836 -285 1818 134 13 34 chr18 18152878 18153049 -68524499 - AluSg SINE Alu -16 294 130 264 59 0 0 chr18 18153049 18153083 -68524465 + (TTA)n Simple_repeat Simple_repeat 3 36 0 1818 134 13 34 chr18 18153083 18153209 -68524339 - AluSg SINE Alu -180 130 3 1892 155 3 17 chr18 18153553 18153849 -68523699 - AluSx SINE Alu -20 292 1 11255 147 27 24 chr18 18154429 18155826 -68521722 + Tigger1 DNA MER2_type 26 1417 -1001 1246 207 24 30 chr18 18155826 18156121 -68521427 - AluJb SINE Alu -19 293 1 11255 147 27 24 chr18 18156121 18156155 -68521393 + Tigger1 DNA MER2_type 1417 1449 -969 2146 116 3 0 chr18 18156155 18156448 -68521100 + AluSg SINE Alu 1 294 -16 11255 147 27 24 chr18 18156448 18156727 -68520821 + Tigger1 DNA MER2_type 1449 1726 -692 2198 110 13 0 chr18 18156727 18157026 -68520522 + AluSp SINE Alu 1 303 -10 11255 147 27 24 chr18 18157026 18157325 -68520223 + Tigger1 DNA MER2_type 1726 2044 -374 501 214 54 9 chr18 18157323 18157435 -68520113 + Tigger1 DNA MER2_type 2302 2418 0 * 928 205 141 25 chr18 18158100 18158383 -68519165 - MER33 DNA MER1_type -1 323 8 1469 198 25 14 chr18 18158503 18158781 -68518767 - AluJo SINE Alu -20 292 12 1822 216 58 66 chr18 18160653 18161345 -68516203 - L1MB7 LINE L1 -9 6175 5389 1601 164 3 50 chr18 18161345 18161643 -68515905 - AluJb SINE Alu -7 305 22 1822 216 58 66 chr18 18161643 18161811 -68515737 - L1MB7 LINE L1 -795 5389 5221 473 214 60 71 chr18 18161913 18162013 -68515535 - L1MB7 LINE L1 -941 5205 5106 2177 117 7 0 chr18 18162013 18162312 -68515236 - AluY SINE Alu -10 301 1 473 214 60 71 chr18 18162312 18162379 -68515169 - L1MB7 LINE L1 -1040 5106 5040 1584 249 47 4 chr18 18162383 18162868 -68514680 - L1M4 LINE L1 -786 5360 4855 441 221 0 0 chr18 18162869 18162946 -68514602 - AluJ/FLAM SINE Alu -233 79 3 1624 205 3 0 chr18 18163219 18163507 -68514041 + AluJo SINE Alu 7 295 -17 585 231 8 0 chr18 18164147 18164264 -68513284 + FLAM_C SINE Alu 1 118 -25 321 343 30 6 chr18 18164370 18164539 -68513009 + L1MC/D LINE L1 5450 5622 -2186 479 273 16 0 chr18 18164803 18164931 -68512617 - L1MC4 LINE L1 -143 7899 7770 279 104 0 0 chr18 18165045 18165093 -68512455 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 1544 152 53 0 chr18 18165520 18165764 -68511784 - AluSx SINE Alu -14 298 42 865 162 108 25 chr18 18166642 18166846 -68510702 - L1MA4A LINE L1 -24 6279 6059 1963 139 7 7 chr18 18166876 18167186 -68510362 - AluSx SINE Alu -2 310 1 235 258 32 0 chr18 18167210 18167272 -68510276 - L1MB7 LINE L1 -236 5948 5885 22 0 0 0 chr18 18167892 18167914 -68509634 + AT_rich Low_complexity Low_complexity 1 22 0 2010 228 77 57 chr18 18168191 18168934 -68508614 - L1ME1 LINE L1 -1 6165 5408 259 261 0 15 chr18 18169139 18169204 -68508344 - L1ME1 LINE L1 -2591 3555 3492 548 200 0 0 chr18 18169242 18169337 -68508211 + FLAM_A SINE Alu 21 115 -27 1639 117 46 0 chr18 18169337 18169427 -68508121 + AluSq SINE Alu 39 123 -190 250 24 71 0 chr18 18169427 18169469 -68508079 + A-rich Low_complexity Low_complexity 2 46 0 1639 117 46 0 chr18 18169469 18169618 -68507930 + AluSq SINE Alu 123 289 -24 1488 183 183 3 chr18 18170080 18170429 -68507119 + LOR1b LTR ERV1 50 461 0 2719 52 26 0 chr18 18170622 18170967 -68506581 + L1PA7 LINE L1 5771 6124 -30 252 204 0 0 chr18 18170983 18171032 -68506516 + MIR SINE MIR 158 206 -56 195 227 0 0 chr18 18171730 18171774 -68505774 + MIR SINE MIR 67 110 -152 2034 207 22 72 chr18 18171900 18172748 -68504800 - L1MB4 LINE L1 -57 6123 5332 2162 105 7 0 chr18 18172748 18173042 -68504506 - AluSc SINE Alu -13 296 1 250 215 0 0 chr18 18173072 18173138 -68504410 - L1MB4 LINE L1 -881 5265 5200 839 240 0 31 chr18 18173139 18173335 -68504213 - AluJo SINE Alu -15 297 108 237 260 117 26 chr18 18173412 18173489 -68504059 - L3 LINE CR1 -308 1269 1186 865 178 94 0 chr18 18173504 18173695 -68503853 - MER58 DNA MER1_type -23 2397 2189 311 274 14 0 chr18 18173789 18173862 -68503686 - MER21B LTR ERV1 -773 90 17 1562 209 10 7 chr18 18173863 18174170 -68503378 - AluJo SINE Alu -4 308 1 712 185 0 0 chr18 18174194 18174313 -68503235 - AluJo SINE Alu -192 120 2 1490 187 19 61 chr18 18174313 18174672 -68502876 + MLT1D LTR MaLR 162 505 0 1684 189 44 0 chr18 18174673 18174969 -68502579 + AluJo SINE Alu 1 309 -3 1326 257 82 18 chr18 18174973 18175579 -68501969 - L2 LINE L2 -216 3097 2458 648 210 0 8 chr18 18175679 18175803 -68501745 + FLAM_C SINE Alu 1 123 -20 1356 210 3 21 chr18 18175834 18176125 -68501423 + AluJo SINE Alu 1 286 -26 277 255 11 11 chr18 18176290 18176384 -68501164 + LTR37A LTR ERV1 240 333 -93 1484 133 0 5 chr18 18176407 18176625 -68500923 - AluSg/x SINE Alu -17 295 79 1189 122 0 6 chr18 18176638 18176802 -68500746 - AluSq SINE Alu -150 163 1 1572 172 3 35 chr18 18176820 18177110 -68500438 - AluJo SINE Alu -31 281 1 2671 214 22 26 chr18 18177131 18177752 -68499796 - L1MB8 LINE L1 -5 6173 5555 683 202 0 31 chr18 18177752 18177881 -68499667 + FLAM_A SINE Alu 1 125 -8 321 223 9 125 chr18 18177907 18177987 -68499561 - L1MB8 LINE L1 -588 5574 5509 1477 194 7 14 chr18 18177987 18178281 -68499267 - AluJb SINE Alu -20 292 1 321 223 9 125 chr18 18178281 18178312 -68499236 - L1MB8 LINE L1 -653 5509 5476 690 229 7 0 chr18 18178374 18178514 -68499034 + AluJo SINE Alu 24 164 -148 243 0 0 0 chr18 18178515 18178542 -68499006 + (TC)n Simple_repeat Simple_repeat 2 28 0 1131 192 131 27 chr18 18178545 18178805 -68498743 - AluJo SINE Alu -15 287 1 1258 242 21 3 chr18 18179055 18179344 -68498204 - AluJo SINE Alu -14 298 5 407 139 39 132 chr18 18179350 18179479 -68498069 - MLT1D LTR MaLR -297 208 92 1473 162 3 86 chr18 18179687 18180014 -68497534 - AluJb SINE Alu -10 302 3 1643 95 110 26 chr18 18180031 18180304 -68497244 - L1PA13 LINE L1 -7 6156 5861 745 250 0 0 chr18 18180701 18180857 -68496691 + MER6B DNA MER2_type 1 156 -54 289 354 127 25 chr18 18181620 18181778 -68495770 + L2 LINE L2 224 397 -2917 1624 187 0 7 chr18 18182406 18182700 -68494848 - AluSg SINE Alu -16 294 3 6532 74 33 3 chr18 18183824 18184692 -68492856 - MER11D LTR ERVK -3 894 1 369 0 0 0 chr18 18185502 18185543 -68492005 + (TG)n Simple_repeat Simple_repeat 1 41 0 1615 188 17 3 chr18 18185728 18186020 -68491528 + AluSx SINE Alu 1 296 -16 1996 110 0 0 chr18 18186134 18186407 -68491141 - AluY SINE Alu -38 273 1 361 205 331 0 chr18 18190216 18190343 -68487205 - MER5A DNA MER1_type -5 184 16 1899 130 14 3 chr18 18191249 18191542 -68486006 + AluY SINE Alu 1 296 -15 3499 57 15 4 chr18 18191544 18191999 -68485549 + L1PA4 LINE L1 5696 6155 0 248 253 118 109 chr18 18192168 18192389 -68485159 - Charlie1 DNA MER1_type -2534 227 5 19252 33 0 0 chr18 18193287 18196388 -68481160 - L1PA2 LINE L1 0 6155 3054 1602 195 7 0 chr18 18196388 18196680 -68480868 - AluSx SINE Alu -16 296 3 22 35 0 0 chr18 18196801 18196830 -68480718 + AT_rich Low_complexity Low_complexity 1 29 0 1740 160 21 4 chr18 18198252 18198556 -68478992 + AluSq SINE Alu 1 309 0 600 188 17 0 chr18 18198925 18199042 -68478506 - AluSp/q SINE Alu -24 289 171 257 284 0 0 chr18 18199042 18199109 -68478439 - MLT1L LTR MaLR -405 210 144 817 247 54 0 chr18 18199311 18199497 -68478051 - MER58A DNA MER1_type 0 224 29 1800 122 25 7 chr18 18199505 18199784 -68477764 - HERVK22 LTR ERVK -6542 295 12 1814 212 55 23 chr18 18199792 18200264 -68477284 - LTR22B LTR ERVK -5 487 1 23 0 0 0 chr18 18200321 18200344 -68477204 + AT_rich Low_complexity Low_complexity 1 23 0 405 350 93 19 chr18 18200540 18200863 -68476685 - L2 LINE L2 -942 2372 2026 390 42 0 0 chr18 18201215 18201263 -68476285 + (TC)n Simple_repeat Simple_repeat 1 48 0 324 0 0 0 chr18 18201262 18201298 -68476250 + (CA)n Simple_repeat Simple_repeat 1 36 0 * 3149 194 49 23 chr18 18201302 18201961 -68475587 - MER44D DNA MER2_type 0 705 30 1032 189 53 66 chr18 18201955 18202199 -68475349 + MER21A LTR ERV1 667 907 -24 * 555 209 0 27 chr18 18202662 18202772 -68474776 - FLAM_A SINE Alu -32 110 4 398 378 5 15 chr18 18202935 18203131 -68474417 - MIR SINE MIR -6 256 63 219 198 8 83 chr18 18203595 18203716 -68473832 + T-rich Low_complexity Low_complexity 5 116 0 2355 60 10 3 chr18 18205471 18205770 -68471778 + AluY SINE Alu 1 301 -10 644 202 9 0 chr18 18206647 18206761 -68470787 + FLAM_A SINE Alu 4 118 -15 21 36 0 0 chr18 18207295 18207323 -68470225 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr18 18207453 18207478 -68470070 + AT_rich Low_complexity Low_complexity 1 25 0 1798 151 34 3 chr18 18207491 18207789 -68469759 - AluSc SINE Alu -2 307 1 1739 64 0 5 chr18 18207799 18208018 -68469530 - AluY SINE Alu -10 301 84 27 29 0 0 chr18 18208188 18208222 -68469326 + AT_rich Low_complexity Low_complexity 1 34 0 23 0 0 0 chr18 18208788 18208811 -68468737 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 18209059 18209083 -68468465 + AT_rich Low_complexity Low_complexity 1 24 0 685 249 61 0 chr18 18209169 18209366 -68468182 + L1MA4 LINE L1 6088 6296 -4 24 67 0 0 chr18 18209633 18209678 -68467870 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr18 18210513 18210548 -68467000 + AT_rich Low_complexity Low_complexity 1 35 0 231 368 90 38 chr18 18211047 18211414 -68466134 + L2 LINE L2 2590 2975 -339 1937 101 0 4 chr18 18212336 18212594 -68464954 + AluY SINE Alu 50 306 -5 267 305 81 46 chr18 18213221 18213418 -68464130 + MIR SINE MIR 9 212 -50 225 330 66 9 chr18 18213865 18213971 -68463577 - L2 LINE L2 -256 3057 2946 182 300 114 29 chr18 18213963 18214033 -68463515 + L2 LINE L2 3168 3243 -29 * 21 36 0 0 chr18 18214227 18214255 -68463293 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr18 18214780 18214810 -68462738 + AT_rich Low_complexity Low_complexity 1 30 0 1696 164 43 16 chr18 18214812 18215116 -68462432 + AluSx SINE Alu 1 312 0 353 221 307 21 chr18 18215810 18215950 -68461598 - MER5A DNA MER1_type -1 188 9 24 85 0 0 chr18 18216642 18216701 -68460847 + AT_rich Low_complexity Low_complexity 1 59 0 449 154 11 0 chr18 18218107 18218198 -68459350 + (TG)n Simple_repeat Simple_repeat 1 92 0 1050 32 0 0 chr18 18218230 18218374 -68459174 + AluY SINE Alu 161 304 0 190 0 0 0 chr18 18218353 18218396 -68459152 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 270 306 25 19 chr18 18218594 18218751 -68458797 - L1ME3A LINE L1 -243 5927 5770 4216 82 7 10 chr18 18218986 18219957 -68457591 - L1P2 LINE L1 -338 5816 4851 339 294 71 20 chr18 18219958 18220210 -68457338 - L1MEc LINE L1 -2721 3494 3230 1413 244 20 11 chr18 18220227 18220584 -68456964 - MLT1A1 LTR MaLR 0 365 6 836 275 55 38 chr18 18220597 18220994 -68456554 - L1MEc LINE L1 -3021 3194 2791 1310 222 41 100 chr18 18221011 18221609 -68455939 - L1MEc LINE L1 -3524 2691 2198 303 28 0 0 chr18 18221609 18221645 -68455903 + (TA)n Simple_repeat Simple_repeat 1 36 0 1310 222 41 100 chr18 18221645 18221886 -68455662 - L1MEc LINE L1 -4017 2198 1944 248 231 58 70 chr18 18222039 18222195 -68455353 - L1MEc LINE L1 -5270 1126 973 * 941 336 84 35 chr18 18222163 18222851 -68454697 - L1MEc LINE L1 -5635 761 40 338 282 86 0 chr18 18223065 18223182 -68454366 + L2 LINE L2 3187 3313 0 368 294 88 23 chr18 18223651 18223957 -68453591 - L1ME4a LINE L1 -278 5843 5518 22 56 0 0 chr18 18224103 18224139 -68453409 + AT_rich Low_complexity Low_complexity 1 36 0 270 309 0 0 chr18 18227021 18227115 -68450433 + L1MC4 LINE L1 6610 6703 -1339 323 310 63 7 chr18 18227917 18228059 -68449489 - L2 LINE L2 -443 2871 2722 324 0 0 0 chr18 18229441 18229477 -68448071 + (CA)n Simple_repeat Simple_repeat 2 37 0 5566 146 50 44 chr18 18229505 18232277 -68445271 - SVA Other Other -518 1384 432 4555 273 37 26 chr18 18232290 18232415 -68445133 + L1P LINE L1 1738 1860 -4286 2045 142 0 0 chr18 18232415 18232710 -68444838 - AluSx SINE Alu -17 295 1 4555 273 37 26 chr18 18232710 18234279 -68443269 + L1P LINE L1 1860 3450 -2696 3211 206 21 3 chr18 18234281 18234902 -68442646 + MSTB-int LTR MaLR 1020 1651 0 1710 237 16 0 chr18 18234902 18235273 -68442275 + MSTB LTR MaLR 1 377 -49 2254 218 14 10 chr18 18235275 18235770 -68441778 + L1 LINE L1 3447 3943 -2203 1721 142 32 4 chr18 18235770 18236046 -68441502 + AluSx SINE Alu 2 286 -22 219 36 0 0 chr18 18236046 18236074 -68441474 + (CAAAC)n Simple_repeat Simple_repeat 2 29 0 293 191 0 16 chr18 18236081 18236144 -68441404 + L1 LINE L1 2769 2830 -3316 215 316 17 35 chr18 18236921 18237095 -68440453 + CT-rich Low_complexity Low_complexity 5 175 0 540 274 55 52 chr18 18238330 18238713 -68438835 + HSREP522 Satellite telomeric 121 504 0 393 290 81 67 chr18 18240150 18240541 -68437007 - L1MDb LINE L1 -5685 724 363 745 324 109 30 chr18 18240548 18241023 -68436525 - L1MDb LINE L1 -5793 616 104 24 0 0 0 chr18 18241150 18241174 -68436374 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr18 18241249 18241271 -68436277 + AT_rich Low_complexity Low_complexity 1 22 0 2076 122 0 3 chr18 18241547 18241841 -68435707 - AluSx SINE Alu -19 293 1 639 241 99 0 chr18 18241843 18241984 -68435564 - FRAM SINE Alu -21 155 1 205 54 54 81 chr18 18242679 18242753 -68434795 + (CCCA)n Simple_repeat Simple_repeat 4 75 0 266 115 0 94 chr18 18242763 18242955 -68434593 + (CCCCCA)n Simple_repeat Simple_repeat 2 175 0 1210 140 34 24 chr18 18243411 18243618 -68433930 + AluJo SINE Alu 6 214 -98 550 314 41 18 chr18 18243740 18243960 -68433588 - MIR SINE MIR -36 226 2 225 274 113 28 chr18 18244262 18244368 -68433180 - L2 LINE L2 0 3272 3158 2335 92 0 3 chr18 18245045 18245348 -68432200 + AluSg SINE Alu 1 302 -8 387 292 30 46 chr18 18245351 18245491 -68432057 + MIR SINE MIR 28 160 -48 563 251 221 5 chr18 18245777 18245976 -68431572 + MIR SINE MIR 14 255 -7 277 285 50 59 chr18 18246514 18246616 -68430932 - MIR3 SINE MIR -28 180 79 214 208 0 21 chr18 18247262 18247310 -68430238 - MIR SINE MIR -10 252 206 303 257 57 50 chr18 18247567 18247707 -68429841 + MIR SINE MIR 35 175 -87 489 298 40 7 chr18 18247963 18248114 -68429434 + MIR3 SINE MIR 19 174 -34 231 240 107 0 chr18 18248369 18248444 -68429104 + L3b LINE CR1 1335 1417 -166 416 19 19 0 chr18 18249095 18249148 -68428400 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 692 270 0 27 chr18 18249164 18249349 -68428199 + MIR SINE MIR 77 256 -6 387 275 33 0 chr18 18249357 18249477 -68428071 - MIR SINE MIR -55 207 84 2674 155 0 13 chr18 18250721 18251191 -68426357 + TAR1 Satellite telomeric 1604 2067 -44 419 131 11 73 chr18 18251336 18251527 -68426021 + (TTAGGG)n Simple_repeat Simple_repeat 1 179 0 721 249 61 0 chr18 18252025 18252222 -68425326 - L1MA4 LINE L1 -4 6296 6088 27 0 0 0 chr18 18252308 18252335 -68425213 + AT_rich Low_complexity Low_complexity 1 27 0 23 0 0 0 chr18 18252583 18252606 -68424942 + AT_rich Low_complexity Low_complexity 1 23 0 1622 97 0 5 chr18 18253379 18253596 -68423952 + AluY SINE Alu 86 301 -10 1966 136 0 7 chr18 18253606 18253914 -68423634 + AluSc SINE Alu 1 306 -3 25 0 0 0 chr18 18253927 18253952 -68423596 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr18 18254081 18254109 -68423439 + AT_rich Low_complexity Low_complexity 1 28 0 762 175 9 0 chr18 18254642 18254756 -68422792 - FLAM_A SINE Alu -15 118 4 2446 58 10 3 chr18 18255642 18255951 -68421597 - AluY SINE Alu 0 311 1 219 198 8 83 chr18 18256825 18256946 -68420602 + T-rich Low_complexity Low_complexity 5 116 0 219 198 8 83 chr18 18258420 18258541 -68419007 + A-rich Low_complexity Low_complexity 5 116 0 421 362 5 15 chr18 18259008 18259204 -68418344 + MIR SINE MIR 63 256 -6 600 221 0 47 chr18 18259367 18259494 -68418054 + FLAM_A SINE Alu 4 124 -9 1019 241 51 4 chr18 18259926 18260162 -68417386 - MER21B LTR ERV1 -3 860 614 302 231 0 0 chr18 18260178 18260230 -68417318 + Tigger7 DNA MER2_type 30 81 -624 198 333 50 40 chr18 18260334 18260433 -68417115 - MIR SINE MIR -161 101 2 654 241 99 0 chr18 18261437 18261578 -68415970 + FRAM SINE Alu 1 155 -21 1989 125 0 3 chr18 18261586 18261874 -68415674 + AluSx SINE Alu 7 293 -19 22 0 0 0 chr18 18262150 18262172 -68415376 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 18262240 18262264 -68415284 + AT_rich Low_complexity Low_complexity 1 24 0 616 318 112 32 chr18 18262391 18262866 -68414682 + L1MDb LINE L1 104 616 -5793 226 219 114 19 chr18 18262873 18262978 -68414570 + L1MDb LINE L1 454 568 -5841 333 284 60 85 chr18 18263005 18263257 -68414291 + L1MDb LINE L1 404 647 -5762 341 294 166 47 chr18 18263424 18263659 -68413889 + L1M2 LINE L1 982 1244 -5605 310 224 84 75 chr18 18264361 18264682 -68412866 - HSREP522 Satellite telomeric -112 392 69 409 247 57 53 chr18 18264785 18265085 -68412463 - HSREP522 Satellite telomeric -83 421 121 203 307 23 34 chr18 18266316 18266494 -68411054 + GA-rich Low_complexity Low_complexity 1 176 0 327 169 0 14 chr18 18267266 18267337 -68410211 - L1 LINE L1 -3308 2838 2769 264 30 0 0 chr18 18267345 18267378 -68410170 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1704 145 32 3 chr18 18267378 18267654 -68409894 - AluSx SINE Alu -27 285 2 2014 222 14 10 chr18 18267654 18268149 -68409399 - L1 LINE L1 -2203 3943 3447 1533 245 16 0 chr18 18268152 18268523 -68409025 - MSTB LTR MaLR -49 377 1 2915 200 25 3 chr18 18268537 18269142 -68408406 - MSTB-int LTR MaLR -14 1637 1020 3995 243 36 23 chr18 18269149 18270715 -68406833 - L1 LINE L1 -2701 3445 1860 2023 141 14 0 chr18 18270715 18271006 -68406542 + AluSx SINE Alu 1 295 -17 3995 243 36 23 chr18 18271006 18271131 -68406417 - L1 LINE L1 -4286 1860 1738 5602 131 51 56 chr18 18271163 18274191 -68403357 + SVA Other Other 391 1383 -716 5602 120 45 47 chr18 18274191 18275186 -68402362 + SVA Other Other 391 1383 -3 432 0 0 0 chr18 18275214 18275262 -68402286 + (TG)n Simple_repeat Simple_repeat 2 49 0 288 341 64 12 chr18 18276650 18276823 -68400725 + L2 LINE L2 2722 2903 -411 22 56 0 0 chr18 18280160 18280196 -68397352 + AT_rich Low_complexity Low_complexity 1 36 0 22 70 0 0 chr18 18280494 18280537 -68397011 + AT_rich Low_complexity Low_complexity 1 43 0 255 294 93 21 chr18 18280692 18280981 -68396567 + L1ME LINE L1 5529 5838 -283 398 394 74 19 chr18 18281458 18281783 -68395765 - L2 LINE L2 0 3272 2930 744 353 29 32 chr18 18281791 18282377 -68395171 + L1MEc LINE L1 365 948 -5773 250 247 0 0 chr18 18282388 18282461 -68395087 + L1MEc LINE L1 998 1070 -5651 337 239 36 72 chr18 18282465 18282603 -68394945 + L1MEc LINE L1 1319 1451 -5270 619 256 12 0 chr18 18282756 18282920 -68394628 + L1MEc LINE L1 2269 2434 -4287 918 242 49 31 chr18 18282950 18283497 -68394051 + L1MEc LINE L1 2350 2893 -3647 10257 200 8 78 chr18 18283598 18284301 -68393247 - L1 LINE L1 -962 5184 4433 1068 174 0 0 chr18 18284301 18284479 -68393069 - AluSp SINE Alu 0 313 136 10257 200 8 78 chr18 18284479 18286722 -68390826 - L1 LINE L1 -1713 4433 2280 409 270 27 9 chr18 18286955 18287066 -68390482 - MER5B DNA MER1_type -3 175 63 576 62 0 0 chr18 18287068 18287149 -68390399 + (TC)n Simple_repeat Simple_repeat 2 82 0 313 120 13 13 chr18 18287149 18287224 -68390324 + (TA)n Simple_repeat Simple_repeat 2 76 0 966 249 171 66 chr18 18287762 18288248 -68389300 + MLT1F LTR MaLR 6 542 0 32 0 0 0 chr18 18289527 18289559 -68387989 + AT_rich Low_complexity Low_complexity 1 32 0 206 353 196 15 chr18 18289978 18290111 -68387437 + MIR3 SINE MIR 46 202 -6 26 74 0 0 chr18 18291469 18291523 -68386025 + AT_rich Low_complexity Low_complexity 1 54 0 225 0 0 0 chr18 18292652 18292677 -68384871 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 203 345 0 48 chr18 18293136 18293220 -68384328 - L2 LINE L2 0 3272 3193 548 211 55 0 chr18 18293467 18293576 -68383972 - MIR3 SINE MIR -12 196 82 991 248 22 0 chr18 18294143 18294365 -68383183 - MIR SINE MIR 0 262 36 181 235 0 59 chr18 18295460 18295511 -68382037 - L2 LINE L2 0 3313 3266 553 89 13 0 chr18 18295711 18295790 -68381758 + MADE1 DNA Mariner 1 80 0 2169 139 0 3 chr18 18296205 18296515 -68381033 + AluSx SINE Alu 1 309 -3 947 206 17 0 chr18 18296515 18296690 -68380858 + AluSg/x SINE Alu 132 309 -1 2318 107 0 0 chr18 18297075 18297374 -68380174 + AluSq SINE Alu 1 299 -14 656 145 84 0 chr18 18298560 18298739 -68378809 + L1MC2 LINE L1 5224 5424 -743 2002 99 36 0 chr18 18298739 18299040 -68378508 + L1PA16 LINE L1 5843 6157 -9 4192 183 41 10 chr18 18299049 18299884 -68377664 + L1MC2 LINE L1 5413 6279 -65 2368 71 7 0 chr18 18299884 18300178 -68377370 - AluY SINE Alu -15 296 1 4192 183 41 10 chr18 18300178 18300240 -68377308 + L1MC2 LINE L1 6279 6338 -6 1388 150 0 0 chr18 18301015 18301228 -68376320 - AluSx SINE Alu -99 213 1 29 70 0 0 chr18 18301312 18301369 -68376179 + AT_rich Low_complexity Low_complexity 1 57 0 197 287 43 43 chr18 18301645 18301739 -68375809 + L2 LINE L2 1882 1975 -1339 1554 120 54 19 chr18 18302042 18302301 -68375247 - MER1B DNA MER1_type -71 268 1 500 259 175 0 chr18 18302535 18302678 -68374870 - L3 LINE CR1 -260 1317 1150 254 246 123 0 chr18 18303387 18303452 -68374096 - L2 LINE L2 -6 3307 3235 22 35 0 0 chr18 18303794 18303823 -68373725 + AT_rich Low_complexity Low_complexity 1 29 0 547 241 71 75 chr18 18304314 18304567 -68372981 + MLT1J LTR MaLR 5 256 -255 5294 169 27 25 chr18 18304876 18305652 -68371896 + LTR49-int LTR ERV1 4418 5199 -1132 1981 123 36 45 chr18 18305652 18306010 -68371538 - THE1A LTR MaLR 0 355 1 5294 169 27 25 chr18 18306010 18306330 -68371218 + LTR49-int LTR ERV1 5199 5517 -814 339 217 29 55 chr18 18306330 18306479 -68371069 + LTR19C LTR ERV1 638 779 0 227 311 107 28 chr18 18306499 18306676 -68370872 + MIR SINE MIR 48 238 -24 633 235 83 18 chr18 18306679 18306896 -68370652 - MLT1D LTR MaLR 0 505 275 1121 239 109 26 chr18 18306921 18307343 -68370205 - LTR29 LTR ERV1 0 622 166 376 297 63 18 chr18 18307468 18307690 -68369858 - MLT1D LTR MaLR -272 233 2 230 279 21 20 chr18 18308211 18308327 -68369221 + CT-rich Low_complexity Low_complexity 1 194 0 4389 153 41 21 chr18 18308389 18308569 -68368979 - MER4D LTR ERV1 0 903 728 3428 116 39 4 chr18 18308569 18309104 -68368444 + MER41A LTR ERV1 1 554 0 4389 153 41 21 chr18 18309104 18309809 -68367739 - MER4D LTR ERV1 -175 728 1 33 0 0 0 chr18 18310172 18310205 -68367343 + AT_rich Low_complexity Low_complexity 1 33 0 2341 146 57 64 chr18 18310434 18311043 -68366505 - MER4B LTR ERV1 -2 777 1 1653 189 100 43 chr18 18311698 18312158 -68365390 - LTR49 LTR ERV1 -65 530 45 251 369 75 11 chr18 18312285 18312472 -68365076 + L2 LINE L2 3072 3270 -2 199 296 0 42 chr18 18312921 18312992 -68364556 + MIR3 SINE MIR 109 176 -32 220 333 58 76 chr18 18313071 18313159 -68364389 - MIR SINE MIR -11 251 163 1781 149 7 3 chr18 18313159 18313454 -68364094 - AluSx SINE Alu -16 296 1 220 333 58 76 chr18 18313454 18313590 -68363958 - MIR SINE MIR -99 163 31 22 0 0 0 chr18 18313821 18313843 -68363705 + AT_rich Low_complexity Low_complexity 1 22 0 8404 188 19 23 chr18 18313843 18316598 -68360950 - L1PB4 LINE L1 -3 6153 3413 239 359 110 19 chr18 18317317 18317526 -68360022 - MIR SINE MIR -3 259 32 768 314 36 16 chr18 18317586 18317838 -68359710 - MIR SINE MIR 0 262 6 734 359 55 25 chr18 18318258 18318820 -68358728 - L2 LINE L2 -676 2638 2060 1028 226 162 3 chr18 18319543 18319839 -68357709 - MER2 DNA MER2_type -1 343 1 324 309 73 8 chr18 18320570 18320693 -68356855 - MIR SINE MIR -75 187 57 1138 251 108 19 chr18 18322507 18322869 -68354679 + MSTD LTR MaLR 3 396 0 192 77 0 0 chr18 18323920 18323946 -68353602 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 184 326 58 23 chr18 18325531 18325617 -68351931 + MIR SINE MIR 61 149 -113 8418 158 103 19 chr18 18325626 18326121 -68351427 + L1M1 LINE L1 15 467 -7098 2422 80 0 0 chr18 18326121 18326432 -68351116 + AluY SINE Alu 1 311 0 8418 158 103 19 chr18 18326432 18327471 -68350077 + L1M1 LINE L1 467 1677 -5888 1173 161 30 15 chr18 18327475 18327674 -68349874 - L1M1 LINE L1 -5707 1858 1657 514 275 135 5 chr18 18328597 18328797 -68348751 + MIR SINE MIR 8 233 -29 23 33 0 0 chr18 18330353 18330383 -68347165 + AT_rich Low_complexity Low_complexity 1 30 0 1040 174 5 15 chr18 18330425 18330620 -68346928 + AluJo SINE Alu 36 228 -84 294 29 0 0 chr18 18330671 18330706 -68346842 + (TG)n Simple_repeat Simple_repeat 2 36 0 305 216 104 37 chr18 18330869 18331003 -68346545 + L1MC4 LINE L1 7900 8042 0 254 350 0 20 chr18 18331074 18331174 -68346374 + MIR SINE MIR 77 174 -88 182 316 53 18 chr18 18331490 18331604 -68345944 + L3b LINE CR1 1212 1329 -254 2065 116 3 0 chr18 18331721 18332015 -68345533 - AluSq SINE Alu -18 295 1 1367 213 97 54 chr18 18332016 18332513 -68345035 + MLT2B1 LTR ERVL 1 518 -2 267 243 75 28 chr18 18332962 18333069 -68344479 + L2 LINE L2 2948 3059 -213 205 359 0 0 chr18 18333281 18333345 -68344203 - MIR3 SINE MIR -25 183 120 374 344 89 36 chr18 18333380 18333741 -68343807 - L2 LINE L2 -5 3308 2929 236 322 35 35 chr18 18334682 18334825 -68342723 - MER5B DNA MER1_type -23 155 13 494 252 9 0 chr18 18334946 18335061 -68342487 - MIR3 SINE MIR -10 198 83 494 252 9 0 chr18 18335896 18336011 -68341537 + MIR3 SINE MIR 83 198 -10 2239 62 3 7 chr18 18336429 18336734 -68340814 - AluY SINE Alu -7 304 1 369 0 0 0 chr18 18339008 18339049 -68338499 + (CA)n Simple_repeat Simple_repeat 1 41 0 527 318 6 12 chr18 18339702 18339875 -68337673 + (TG)n Simple_repeat Simple_repeat 1 172 0 229 171 14 14 chr18 18340444 18340514 -68337034 + CT-rich Low_complexity Low_complexity 4 73 0 463 187 72 226 chr18 18341591 18341950 -68335598 + MER51A LTR ERV1 331 634 0 * 663 230 62 62 chr18 18341950 18342174 -68335374 + LTR34 LTR ERV1 123 346 -353 573 216 176 11 chr18 18342175 18342351 -68335197 + LTR34 LTR ERV1 489 693 -6 875 261 19 41 chr18 18342431 18342745 -68334803 - ERVL LTR ERVL -338 5426 5120 227 284 11 80 chr18 18344148 18344236 -68333312 - MER5B DNA MER1_type 0 178 97 186 283 0 17 chr18 18346502 18346562 -68330986 + MIR SINE MIR 24 82 -126 232 317 70 28 chr18 18346638 18346780 -68330768 - L2 LINE L2 -2 3270 3123 3373 119 50 23 chr18 18346816 18347198 -68330350 + Tigger3b DNA MER2_type 148 553 -2475 2019 120 10 0 chr18 18347198 18347490 -68330058 - AluSx SINE Alu -17 295 1 3373 119 50 23 chr18 18347490 18347705 -68329843 + Tigger3b DNA MER2_type 553 761 -470 698 253 0 13 chr18 18347769 18347927 -68329621 + Tigger3b DNA MER2_type 1085 1240 -1 304 272 27 80 chr18 18349926 18349960 -68327588 - MIR SINE MIR -63 145 111 533 234 144 32 chr18 18349960 18350148 -68327400 + MER3 DNA MER1_type 1 209 0 304 272 27 80 chr18 18350148 18350266 -68327282 - MIR SINE MIR -97 111 2 204 253 93 0 chr18 18351060 18351135 -68326413 - MIR SINE MIR -145 117 36 187 300 8 108 chr18 18352139 18352269 -68325279 + L2 LINE L2 3140 3256 -16 338 256 110 0 chr18 18353375 18353457 -68324091 - MIR SINE MIR -70 192 102 * 340 353 86 17 chr18 18353444 18353676 -68323872 + MIR SINE MIR 6 250 -12 393 336 5 32 chr18 18354842 18355039 -68322509 + MIR SINE MIR 19 206 -56 577 315 101 13 chr18 18355079 18355317 -68322231 + MIR SINE MIR 4 262 0 997 248 41 5 chr18 18355555 18355928 -68321620 - L1M4 LINE L1 -612 6060 5676 * 7386 252 67 30 chr18 18355923 18357358 -68320190 - L1M4c LINE L1 -1222 5422 4041 1695 162 10 29 chr18 18357358 18357666 -68319882 - AluJo SINE Alu -10 302 1 7386 252 67 30 chr18 18357666 18360440 -68317108 - L1M4c LINE L1 -2603 4041 793 2050 142 0 0 chr18 18360440 18360749 -68316799 - AluSg SINE Alu -1 309 1 7386 252 67 30 chr18 18360749 18361567 -68315981 - L1M4c LINE L1 -5851 793 6 252 0 0 0 chr18 18362325 18362353 -68315195 + (A)n Simple_repeat Simple_repeat 1 28 0 1695 217 80 19 chr18 18362672 18363184 -68314364 - MER44D DNA MER2_type -7 598 1 288 111 0 0 chr18 18364217 18364262 -68313286 + (GGA)n Simple_repeat Simple_repeat 1 45 0 1888 188 20 6 chr18 18365092 18365437 -68312111 - MLT1A1 LTR MaLR 0 365 16 1605 221 37 5 chr18 18365473 18365849 -68311699 - MLT1A1-int LTR MaLR -30 1705 1318 208 289 12 72 chr18 18369068 18369234 -68308314 + CT-rich Low_complexity Low_complexity 2 157 0 374 337 36 12 chr18 18370245 18370411 -68307137 - MIR3 SINE MIR -34 174 5 190 328 181 0 chr18 18370436 18370552 -68306996 - L2 LINE L2 0 3272 3136 243 257 6 11 chr18 18370974 18371153 -68306395 + (TG)n Simple_repeat Simple_repeat 1 178 0 543 364 67 29 chr18 18371159 18371640 -68305908 - L2 LINE L2 -641 2673 2175 1997 201 79 14 chr18 18371902 18372034 -68305514 - L1MA9 LINE L1 -10 6302 6180 219 36 0 0 chr18 18372034 18372062 -68305486 + (TG)n Simple_repeat Simple_repeat 1 28 0 1997 201 79 14 chr18 18372062 18372414 -68305134 - L1MA9 LINE L1 -132 6180 5780 210 37 0 0 chr18 18372414 18372441 -68305107 + (TG)n Simple_repeat Simple_repeat 2 28 0 1997 201 79 14 chr18 18372441 18372472 -68305076 - L1MA9 LINE L1 -532 5780 5752 * 2448 181 11 17 chr18 18372469 18373025 -68304523 + L1MA9 LINE L1 5203 5759 -553 252 296 30 37 chr18 18373998 18374133 -68303415 - MER5A DNA MER1_type -24 165 32 364 290 10 0 chr18 18374186 18374286 -68303262 - MER5A DNA MER1_type -84 105 5 1385 276 67 40 chr18 18375422 18375948 -68301600 + MLT1G1 LTR MaLR 31 570 -25 2248 132 0 0 chr18 18376917 18377227 -68300321 - AluSx SINE Alu -2 310 1 227 341 32 24 chr18 18377590 18377713 -68299835 + MIR SINE MIR 5 128 -134 449 302 44 19 chr18 18379732 18379891 -68297657 + MIR SINE MIR 59 221 -41 236 328 176 8 chr18 18379924 18380055 -68297493 - MIR SINE MIR -74 188 36 184 298 0 18 chr18 18381497 18381554 -68295994 - L2 LINE L2 -1044 2270 2215 265 254 0 0 chr18 18383060 18383119 -68294429 + L2 LINE L2 3251 3309 -4 36 82 0 0 chr18 18383835 18383920 -68293628 + AT_rich Low_complexity Low_complexity 1 85 0 1263 111 37 0 chr18 18384453 18384643 -68292905 - MER107 DNA MER1_type 0 197 1 1414 203 54 79 chr18 18384941 18385384 -68292164 + MSTB1 LTR MaLR 1 432 0 8963 211 47 16 chr18 18385508 18387682 -68289866 + L1 LINE L1 2169 4417 -1729 396 0 0 0 chr18 18387682 18387726 -68289822 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 8963 211 47 16 chr18 18387726 18387803 -68289745 + L1 LINE L1 4417 4490 -1656 231 167 0 0 chr18 18387806 18387842 -68289706 + Alu SINE Alu 136 171 -132 2899 233 4 9 chr18 18387985 18388732 -68288816 - L1 LINE L1 -927 5219 4477 623 258 5 10 chr18 18388741 18388935 -68288613 - AluSp SINE Alu 0 313 121 396 0 0 0 chr18 18389000 18389044 -68288504 + (GTTTG)n Simple_repeat Simple_repeat 2 45 0 23 33 0 0 chr18 18389575 18389605 -68287943 + GC_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr18 18391087 18391128 -68286420 + GC_rich Low_complexity Low_complexity 1 41 0 195 100 0 0 chr18 18393072 18393102 -68284446 + (CCCTG)n Simple_repeat Simple_repeat 1 30 0 246 266 16 0 chr18 18398027 18398091 -68279457 + CT-rich Low_complexity Low_complexity 3 67 0 401 289 33 13 chr18 18398477 18398629 -68278919 - MIR SINE MIR -50 212 58 263 343 20 0 chr18 18398889 18398991 -68278557 - MLT1I LTR MaLR -141 268 165 301 358 58 29 chr18 18399021 18399228 -68278320 + L1MC4a LINE L1 5133 5345 -801 354 294 84 17 chr18 18399308 18399616 -68277932 + MLT1I LTR MaLR 4 406 -3 537 326 47 7 chr18 18399637 18399913 -68277635 + L1MC4a LINE L1 5577 5863 -1945 27 0 0 0 chr18 18399967 18399994 -68277554 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr18 18400036 18400057 -68277491 + AT_rich Low_complexity Low_complexity 1 21 0 766 161 0 0 chr18 18400207 18400325 -68277223 - THE1C LTR MaLR -257 118 1 367 351 47 7 chr18 18400326 18400474 -68277074 - MLT1K LTR MaLR -421 167 14 1939 179 0 10 chr18 18400529 18400837 -68276711 + AluJb SINE Alu 1 305 -7 339 358 54 25 chr18 18401589 18401793 -68275755 - L3 LINE CR1 -9 1568 1359 2305 88 3 0 chr18 18402789 18403108 -68274440 - AluY SINE Alu 0 311 3 3025 129 39 10 chr18 18403233 18403507 -68274041 - Tigger3(Golem) DNA MER2_type 0 3028 2763 2025 109 84 0 chr18 18403507 18403792 -68273756 + AluSx SINE Alu 1 309 -3 3025 129 39 10 chr18 18403792 18404036 -68273512 - Tigger3(Golem) DNA MER2_type -265 2763 2495 1144 118 24 0 chr18 18406085 18406254 -68271294 + THE1C LTR MaLR 1 173 -202 871 98 0 0 chr18 18406270 18406393 -68271155 + L1MA3 LINE L1 6183 6305 0 23 0 0 0 chr18 18406393 18406416 -68271132 + AT_rich Low_complexity Low_complexity 1 23 0 4002 78 0 0 chr18 18408161 18408676 -68268872 + L1P LINE L1 9 523 -5623 183 266 0 62 chr18 18410033 18410097 -68267451 + L2 LINE L2 3254 3313 0 884 159 118 0 chr18 18410479 18410649 -68266899 + MSTA LTR MaLR 18 207 -221 666 149 26 9 chr18 18410665 18410779 -68266769 + MSTA LTR MaLR 311 426 0 1010 87 31 0 chr18 18410779 18410940 -68266608 + MSTA-int LTR MaLR 1 166 -1485 * 3199 213 27 3 chr18 18410934 18411562 -68265986 + MSTA-int LTR MaLR 289 931 -720 1814 180 70 17 chr18 18411563 18411926 -68265622 + TAR1 Satellite telomeric 1 381 -150 774 207 84 22 chr18 21411926 21412153 -65265395 + LTR24B LTR ERV1 121 361 -215 653 218 40 2 chr18 21412215 21412423 -65265125 + LTR24B LTR ERV1 251 525 -4 317 223 76 19 chr18 21412423 21412580 -65264968 - L1M4 LINE L1 -854 5292 5127 326 279 114 22 chr18 21412605 21412860 -65264688 - L1MDa LINE L1 -4501 2039 1788 1744 111 0 75 chr18 21413064 21413397 -65264151 + AluSq SINE Alu 1 308 -5 2543 189 92 8 chr18 21413415 21414166 -65263382 - L1ME2 LINE L1 -185 5979 5169 995 183 96 12 chr18 21414401 21414641 -65262907 - MER2 DNA MER2_type 0 345 86 234 128 0 0 chr18 21414678 21414717 -65262831 + (TC)n Simple_repeat Simple_repeat 2 40 0 228 191 0 0 chr18 21414730 21414772 -65262776 - MER2 DNA MER2_type -303 42 1 330 85 34 17 chr18 21414777 21414836 -65262712 - L1M4 LINE L1 -1922 4224 4165 * 3331 173 63 33 chr18 21414827 21415594 -65261954 - L1MD2 LINE L1 -232 6127 5338 22 35 0 0 chr18 21416272 21416301 -65261247 + AT_rich Low_complexity Low_complexity 1 29 0 2120 94 3 17 chr18 21416315 21416603 -65260945 - AluSx SINE Alu -28 284 1 2366 91 3 3 chr18 21417771 21418102 -65259446 - L1PA7 LINE L1 -2 6152 5822 2190 106 10 13 chr18 21418109 21418410 -65259138 - AluSx SINE Alu -12 300 1 396 0 0 0 chr18 21418484 21418528 -65259020 + (TTCA)n Simple_repeat Simple_repeat 3 46 0 2057 108 4 4 chr18 21418528 21418807 -65258741 - AluSx SINE Alu -28 284 6 327 276 35 76 chr18 21418852 21418997 -65258551 - MIR SINE MIR -110 152 14 1046 168 4 5 chr18 21421355 21429027 -65248521 + ALR/Alpha Satellite centromeric 1 7658 0 337 115 0 0 chr18 21429108 21429160 -65248388 + ALR/Alpha Satellite centromeric 82 133 -38 972 175 5 33 chr18 21429265 21434358 -65243190 + ALR/Alpha Satellite centromeric 1 4948 -1 1083 175 7 20 chr18 21434371 21436081 -65241467 + ALR/Alpha Satellite centromeric 1 1688 -14 1084 180 4 7 chr18 21436200 21441464 -65236084 + ALR/Alpha Satellite centromeric 1 5248 0 1083 176 4 2 chr18 21441475 21444399 -65233149 + ALR/Alpha Satellite centromeric 1 2930 -59 1608 154 49 11 chr18 21444868 21445153 -65232395 + AluJb SINE Alu 1 296 -16 2013 144 7 10 chr18 21446258 21446564 -65230984 - AluJb SINE Alu -7 305 1 324 319 208 0 chr18 21446886 21447102 -65230446 + L1M4 LINE L1 4016 4276 -1870 1722 187 79 15 chr18 21447198 21447540 -65230008 - THE1B LTR MaLR 0 364 1 11345 88 26 7 chr18 21447540 21447596 -65229952 - THE1B-int LTR MaLR 0 1580 1527 2041 154 13 0 chr18 21447596 21447902 -65229646 + AluSx SINE Alu 1 310 -2 11345 88 26 7 chr18 21447902 21449395 -65228153 - THE1B-int LTR MaLR -53 1527 1 2035 140 76 15 chr18 21449395 21449737 -65227811 - THE1B LTR MaLR 0 364 2 1619 176 0 4 chr18 21449737 21449998 -65227550 - AluJb SINE Alu -31 281 22 236 242 91 0 chr18 21450115 21450181 -65227367 + MER102b DNA MER1_type 238 309 -32 1146 150 1 0 chr18 21450254 21452531 -65225017 + ALR/Alpha Satellite centromeric 1 2280 -65 1179 141 0 6 chr18 21452631 21452801 -65224747 - AluSq SINE Alu -144 169 1 650 154 14 21 chr18 21452801 21452944 -65224604 + L1ME1 LINE L1 5855 5996 -170 * 2643 197 99 47 chr18 21452933 21453805 -65223743 + L1MC3 LINE L1 6036 6952 -833 228 322 42 42 chr18 21453999 21454117 -65223431 + L2 LINE L2 2590 2707 -607 281 303 0 55 chr18 21454141 21454250 -65223298 - L2 LINE L2 -1 3312 3210 293 184 119 55 chr18 21455163 21455364 -65222184 + L1MC5 LINE L1 7125 7338 -623 923 193 30 25 chr18 21455369 21455566 -65221982 + MER3 DNA MER1_type 7 204 -5 230 208 0 0 chr18 21455530 21455578 -65221970 - MER3 DNA MER1_type -121 88 41 * 322 240 32 24 chr18 21455581 21455706 -65221842 + L1MC5 LINE L1 7340 7465 -496 243 287 54 54 chr18 21455941 21456070 -65221478 + MIR3 SINE MIR 43 171 -37 879 150 0 0 chr18 21456070 21456197 -65221351 - FLAM_C SINE Alu -6 127 1 1893 97 0 0 chr18 21456312 21456549 -65220999 + AluSg SINE Alu 3 239 -71 938 226 40 80 chr18 21456671 21457149 -65220399 - L1M4 LINE L1 -3545 3099 2641 892 226 59 41 chr18 21457151 21457491 -65220057 - L1M4 LINE L1 -5317 1329 984 388 183 24 12 chr18 21457493 21457575 -65219973 - LTR9B LTR ERV1 0 644 562 8558 170 44 5 chr18 21457578 21459135 -65218413 + HUERS-P3 LTR ERV1 1467 3084 -5835 485 59 226 29 chr18 21459135 21459237 -65218311 - LTR9B LTR ERV1 -522 122 1 243 0 0 0 chr18 21459243 21459270 -65218278 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 300 70 0 0 chr18 21459269 21459312 -65218236 + (TG)n Simple_repeat Simple_repeat 2 44 0 2016 140 0 0 chr18 21459312 21459597 -65217951 - AluSx SINE Alu -27 285 1 480 221 25 0 chr18 21459645 21459767 -65217781 - L1M4 LINE L1 -5587 955 831 284 266 25 26 chr18 21459876 21460013 -65217535 - L1M4 LINE L1 -5728 918 588 2882 6 0 0 chr18 21460371 21460682 -65216866 + AluYb8 SINE Alu 1 311 -7 327 277 112 48 chr18 21460702 21460908 -65216640 - L1M4 LINE L1 -6319 223 5 312 27 0 0 chr18 21460938 21460975 -65216573 + (TG)n Simple_repeat Simple_repeat 2 38 0 581 146 0 0 chr18 21460976 21461065 -65216483 + AluSq/x SINE Alu 47 135 -177 350 151 21 97 chr18 21461098 21461126 -65216422 - L1MB3 LINE L1 -23 6160 6131 2225 110 0 0 chr18 21461126 21461418 -65216130 - AluSx SINE Alu -16 296 5 350 151 21 97 chr18 21461418 21461482 -65216066 - L1MB3 LINE L1 -52 6131 6075 239 343 169 30 chr18 21461571 21461663 -65215885 + L2 LINE L2 1986 2064 -1250 2233 100 10 3 chr18 21461663 21461972 -65215576 - AluSx SINE Alu -1 311 1 239 343 169 30 chr18 21461972 21462677 -65214871 + L2 LINE L2 2064 2894 -420 273 299 0 10 chr18 21463082 21463179 -65214369 - L2 LINE L2 -307 2965 2870 1840 160 0 17 chr18 21463480 21463773 -65213775 - AluJo SINE Alu -24 288 1 1584 146 40 15 chr18 21464551 21464825 -65212723 - AluSx SINE Alu 0 312 32 1611 75 0 53 chr18 21464927 21464979 -65212569 + AluSq SINE Alu 84 137 -176 2055 111 27 0 chr18 21464979 21465277 -65212271 + AluSp SINE Alu 1 306 -7 1611 75 0 53 chr18 21465277 21465452 -65212096 + AluSq SINE Alu 137 299 -14 2187 113 0 3 chr18 21470971 21471273 -65206275 - AluSx SINE Alu -11 301 1 2070 140 27 3 chr18 21471795 21472131 -65205417 + MER46B DNA MER2_type 18 236 0 194 263 0 0 chr18 21472161 21472199 -65205349 - L3 LINE CR1 -90 1487 1450 764 179 106 0 chr18 21472594 21472745 -65204803 + AluSg/x SINE Alu 137 303 -9 405 272 123 40 chr18 21473134 21473362 -65204186 + L2 LINE L2 2135 2381 -933 400 316 111 16 chr18 21473777 21473967 -65203581 + MIR SINE MIR 34 241 -21 2017 77 4 0 chr18 21474468 21474728 -65202820 - AluY SINE Alu -50 261 1 481 333 83 11 chr18 21475125 21475305 -65202243 + MIR3 SINE MIR 6 198 -10 1599 153 77 7 chr18 21475306 21475593 -65201955 + AluJo SINE Alu 1 307 -5 1769 144 49 11 chr18 21476166 21476450 -65201098 - AluJb SINE Alu -17 295 1 417 287 26 9 chr18 21476512 21476627 -65200921 - L2 LINE L2 0 3313 3197 277 309 118 15 chr18 21476786 21476922 -65200626 + MER5A DNA MER1_type 35 184 -5 975 239 59 70 chr18 21476976 21477573 -65199975 - L1MC5 LINE L1 -49 7912 7323 396 221 24 92 chr18 21477730 21477969 -65199579 - L1MC4 LINE L1 -737 7224 7027 383 276 91 56 chr18 21478020 21478252 -65199296 - LTR33 LTR ERVL -40 481 242 670 195 131 125 chr18 21478456 21478815 -65198733 - L1MC4 LINE L1 -894 6999 6611 2108 120 7 3 chr18 21478993 21479292 -65198256 - AluSx SINE Alu -12 300 1 1682 190 0 3 chr18 21479294 21479583 -65197965 - AluJo SINE Alu -24 288 1 210 192 0 0 chr18 21479727 21479779 -65197769 + (TA)n Simple_repeat Simple_repeat 2 53 0 1339 253 133 63 chr18 21479819 21480861 -65196687 - L1MC4 LINE L1 -747 5399 4741 441 270 58 7 chr18 21480962 21481099 -65196449 + MIR SINE MIR 48 191 -71 493 300 67 29 chr18 21481122 21481332 -65196216 + MIR SINE MIR 24 241 -21 491 219 27 75 chr18 21481421 21481567 -65195981 + MIR SINE MIR 59 197 -65 278 163 20 0 chr18 21482483 21482532 -65195016 - MLT1K LTR MaLR 0 588 539 2316 98 0 3 chr18 21482544 21482841 -65194707 + AluSx SINE Alu 1 296 -16 930 170 0 0 chr18 21482875 21483040 -65194508 - L1MA3 LINE L1 0 6305 6141 6024 115 46 34 chr18 21483055 21483973 -65193575 - L1MA2 LINE L1 0 6304 5399 2413 81 0 10 chr18 21483973 21484280 -65193268 - AluSp SINE Alu -9 304 1 1689 133 39 39 chr18 21484283 21484562 -65192986 - AluJb SINE Alu -17 295 17 6024 115 46 34 chr18 21484562 21484738 -65192810 - L1MA2 LINE L1 -906 5398 5180 2205 113 0 10 chr18 21485073 21485373 -65192175 - AluY SINE Alu -14 297 1 330 323 32 32 chr18 21485469 21485627 -65191921 + MIR SINE MIR 40 197 -65 24 32 0 0 chr18 21486335 21486366 -65191182 + AT_rich Low_complexity Low_complexity 1 31 0 1748 151 18 11 chr18 21486440 21486725 -65190823 - AluJb SINE Alu -5 307 21 1994 151 65 59 chr18 21486948 21487043 -65190505 - Tigger2 DNA MER2_type 0 2718 2625 1823 144 3 32 chr18 21487043 21487356 -65190192 - AluSx SINE Alu -8 304 1 1994 151 65 59 chr18 21487356 21487437 -65190111 - Tigger2 DNA MER2_type -93 2625 2546 2253 98 0 0 chr18 21487437 21487722 -65189826 - AluSg SINE Alu -25 285 1 1994 151 65 59 chr18 21487722 21487987 -65189561 - Tigger2 DNA MER2_type -172 2546 2273 428 145 0 0 chr18 21487987 21488049 -65189499 - Tigger2 DNA MER2_type -2656 62 1 455 286 9 0 chr18 21488201 21488306 -65189242 + L2 LINE L2 3196 3301 -12 1307 208 4 0 chr18 21488616 21488847 -65188701 - AluJo SINE Alu -64 248 17 2406 149 71 36 chr18 21488847 21489140 -65188408 + Charlie1 DNA MER1_type 2068 2349 -412 2369 113 3 24 chr18 21489140 21489511 -65188037 + MER47A DNA MER2_type 4 366 0 2406 149 71 36 chr18 21489511 21489685 -65187863 + Charlie1 DNA MER1_type 2349 2557 -204 2023 108 3 49 chr18 21489685 21489992 -65187556 + AluSx SINE Alu 1 293 -19 2406 149 71 36 chr18 21489992 21490046 -65187502 + Charlie1 DNA MER1_type 2557 2608 -153 1205 171 38 121 chr18 21490049 21490447 -65187101 - MLT1A1 LTR MaLR 0 365 1 2968 222 75 20 chr18 21490462 21490515 -65187033 - L1MDa LINE L1 -3057 3483 3434 1717 160 0 38 chr18 21490515 21490833 -65186715 - AluJo SINE Alu -6 306 1 2968 222 75 20 chr18 21490833 21492313 -65185235 - L1MDa LINE L1 -3106 3434 1869 744 195 22 74 chr18 21492320 21492551 -65184997 - L1MDa LINE L1 -4859 1681 1463 2462 77 0 0 chr18 21492633 21492933 -65184615 + AluSx SINE Alu 1 300 -12 426 312 8 0 chr18 21493213 21493342 -65184206 - MIR SINE MIR -58 150 48 8827 217 43 26 chr18 21493659 21493687 -65183861 - L1MB4 LINE L1 -12 6168 6142 624 197 86 0 chr18 21493687 21493804 -65183744 - FLAM_A SINE Alu -4 129 3 8827 217 43 26 chr18 21493804 21495114 -65182434 - L1MB4 LINE L1 -38 6142 4855 2245 142 24 64 chr18 21495114 21495566 -65181982 - Tigger2a DNA MER2_type 0 434 1 8827 217 43 26 chr18 21495566 21496080 -65181468 - L1MB4 LINE L1 -1325 4855 4351 180 0 0 0 chr18 21496080 21496100 -65181448 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 8827 217 43 26 chr18 21496100 21496802 -65180746 - L1MB4 LINE L1 -1829 4351 3662 1406 191 48 20 chr18 21496802 21497095 -65180453 + AluJb SINE Alu 1 301 -1 8827 217 43 26 chr18 21497095 21497977 -65179571 - L1MB4 LINE L1 -2518 3662 2689 1989 113 38 10 chr18 21498542 21498833 -65178715 - AluSx SINE Alu -13 299 1 496 178 68 25 chr18 21499681 21499799 -65177749 - MIR SINE MIR -47 215 93 1831 154 23 3 chr18 21500145 21500450 -65177098 + AluJb SINE Alu 1 311 -1 25 83 0 0 chr18 21501718 21501778 -65175770 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr18 21502221 21502243 -65175305 + AT_rich Low_complexity Low_complexity 1 22 0 3394 229 72 24 chr18 21502307 21503356 -65174192 + L1M4 LINE L1 3788 4886 -1260 1052 197 30 0 chr18 21503372 21503636 -65173912 + L1M4 LINE L1 4970 5241 -905 * 3032 221 56 15 chr18 21503625 21503935 -65173613 + L1ME1 LINE L1 4872 5168 -998 2170 116 3 3 chr18 21503935 21504238 -65173310 + AluSx SINE Alu 1 303 -9 3032 221 56 15 chr18 21504238 21505142 -65172406 + L1ME1 LINE L1 5168 6143 -23 1081 172 20 34 chr18 21506501 21506705 -65170843 - MER20 DNA MER1_type 0 219 19 207 330 130 40 chr18 21507245 21507445 -65170103 - L2 LINE L2 -212 3060 2843 182 351 47 68 chr18 21507835 21507983 -65169565 + L2 LINE L2 2573 2717 -597 580 214 100 0 chr18 21508351 21508491 -65169057 + MSTD LTR MaLR 1 154 -242 465 156 0 0 chr18 21508555 21508632 -65168916 + MSTD LTR MaLR 320 396 0 256 264 66 11 chr18 21508655 21508746 -65168802 + L2 LINE L2 3182 3277 -36 250 254 0 17 chr18 21508823 21508882 -65168666 + MER47A DNA MER2_type 307 364 -2 741 209 181 7 chr18 21508882 21509159 -65168389 - L1MC3 LINE L1 -512 7273 6949 1453 195 3 84 chr18 21509283 21509453 -65168095 - L1MC3 LINE L1 -1958 5827 5703 2290 99 7 0 chr18 21509453 21509756 -65167792 - AluSp SINE Alu -8 305 1 1453 195 3 84 chr18 21509756 21509965 -65167583 - L1MC3 LINE L1 -2082 5703 5479 489 160 104 16 chr18 21509955 21510080 -65167468 - L1MC3 LINE L1 -942 5204 5069 * 2901 162 21 32 chr18 21510083 21510702 -65166846 - L1MB8 LINE L1 0 6178 5567 301 368 62 65 chr18 21510835 21511175 -65166373 - L2 LINE L2 -84 3188 2850 1532 179 79 0 chr18 21511437 21511716 -65165832 + AluJb SINE Alu 2 302 -10 283 200 33 0 chr18 21511961 21512021 -65165527 + HsTC2 DNA Tc2 1835 1896 -2 539 270 106 29 chr18 21512029 21512340 -65165208 - L1ME4a LINE L1 -1 6120 5786 284 114 43 86 chr18 21512383 21512453 -65165095 - L1ME4a LINE L1 -439 5682 5616 29 0 0 25 chr18 21512456 21512484 -65165064 + AT_rich Low_complexity Low_complexity 1 29 -10 2032 131 3 0 chr18 21512484 21512775 -65164773 - AluSx SINE Alu -20 292 1 29 0 0 25 chr18 21512775 21512786 -65164762 + AT_rich Low_complexity Low_complexity 29 39 0 8692 241 72 22 chr18 21513258 21515893 -65161655 - L2 LINE L2 -182 3131 349 532 214 77 8 chr18 21515893 21516010 -65161538 + Cheshire DNA MER1_type 1 125 -2295 383 247 65 0 chr18 21516014 21516107 -65161441 - L2 LINE L2 -1014 2300 2202 3514 186 74 68 chr18 21516135 21516494 -65161054 + Cheshire DNA MER1_type 120 475 -1945 1714 161 4 8 chr18 21516494 21516761 -65160787 - AluJo SINE Alu -46 266 1 3514 186 74 68 chr18 21516761 21517333 -65160215 + Cheshire DNA MER1_type 475 1057 -1363 2146 123 8 64 chr18 21517439 21517796 -65159752 - MER1B DNA MER1_type 0 337 1 238 405 39 17 chr18 21518282 21518460 -65159088 + L2 LINE L2 2574 2755 -559 261 362 89 71 chr18 21518729 21518846 -65158702 + L2 LINE L2 2828 2941 -331 1783 175 0 20 chr18 21518846 21519149 -65158399 - AluJb SINE Alu -15 297 1 261 362 89 71 chr18 21519149 21519468 -65158080 + L2 LINE L2 2941 3272 0 1889 158 3 3 chr18 21521466 21521758 -65155790 + AluJb SINE Alu 2 293 -19 30 59 0 0 chr18 21521758 21521809 -65155739 + AT_rich Low_complexity Low_complexity 1 51 0 22 80 0 0 chr18 21521854 21521904 -65155644 + AT_rich Low_complexity Low_complexity 1 50 0 304 333 50 17 chr18 21522054 21522174 -65155374 + MIR SINE MIR 16 139 -69 2380 50 3 20 chr18 21522502 21522801 -65154747 - AluY SINE Alu -15 296 3 807 138 0 158 chr18 21522855 21523051 -65154497 - MER20 DNA MER1_type 0 219 55 543 171 154 17 chr18 21523343 21523460 -65154088 + AluJb SINE Alu 1 133 -179 190 274 59 0 chr18 21524050 21524101 -65153447 - MIR SINE MIR -142 120 67 2370 93 0 0 chr18 21524105 21524415 -65153133 + AluY SINE Alu 1 310 -1 1595 168 14 4 chr18 21525156 21525436 -65152112 + AluJb SINE Alu 1 283 -29 298 123 46 15 chr18 21526697 21526762 -65150786 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 28 48 0 0 chr18 21526762 21526804 -65150744 + AT_rich Low_complexity Low_complexity 1 42 0 214 227 18 27 chr18 21527332 21527442 -65150106 + (TA)n Simple_repeat Simple_repeat 1 109 0 495 244 113 0 chr18 21528502 21528662 -65148886 + MER104 DNA MER2_type 3 180 0 875 118 0 29 chr18 21529029 21529165 -65148383 - FLAM_C SINE Alu 0 133 2 189 0 0 0 chr18 21529175 21529196 -65148352 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2057 108 7 4 chr18 21529196 21529473 -65148075 - AluSg SINE Alu -32 278 1 455 335 17 72 chr18 21529499 21529735 -65147813 - L2 LINE L2 -38 3234 3012 2010 122 7 10 chr18 21530244 21530540 -65147008 - AluSx SINE Alu -17 295 1 393 273 8 76 chr18 21532418 21532550 -65144998 - L2 LINE L2 -4 3309 3187 216 390 0 30 chr18 21533203 21533303 -65144245 - MIR SINE MIR -156 106 10 1452 181 31 19 chr18 21533583 21533842 -65143706 + AluJo SINE Alu 10 271 -41 1950 157 88 100 chr18 21534231 21534809 -65142739 - L1MB3 LINE L1 -1 6179 5609 837 154 0 0 chr18 21534815 21534938 -65142610 - FLAM_C SINE Alu -20 123 1 343 216 40 0 chr18 21534939 21535013 -65142535 - L1MB3 LINE L1 -573 5607 5531 301 169 6 6 chr18 21535013 21535081 -65142467 - Alu SINE Alu -260 42 1 5634 212 29 24 chr18 21535081 21536254 -65141294 - L1M3 LINE L1 -600 6081 4887 2268 77 0 49 chr18 21536254 21536579 -65140969 - AluY SINE Alu -2 309 1 5634 212 29 24 chr18 21536579 21537083 -65140465 - L1M3 LINE L1 -1794 4887 4387 1656 177 10 23 chr18 21537085 21537390 -65140158 - AluJo SINE Alu 0 312 12 275 244 11 0 chr18 21537397 21537487 -65140061 - L1M3 LINE L1 -2685 3959 3869 1662 152 3 54 chr18 21537494 21537810 -65139738 + AluSx SINE Alu 1 300 -12 691 230 32 16 chr18 21537811 21538063 -65139485 - L1M3 LINE L1 -4039 2607 2352 2809 190 61 73 chr18 21538144 21538686 -65138862 - L1M3 LINE L1 -4844 1698 1168 2556 62 0 3 chr18 21538686 21538992 -65138556 - AluY SINE Alu -4 307 3 2809 190 61 73 chr18 21538992 21539329 -65138219 - L1M3 LINE L1 -5374 1168 829 439 250 40 26 chr18 21539345 21539497 -65138051 - L1M3 LINE L1 -6384 158 5 561 284 90 5 chr18 21539857 21540058 -65137490 - MER20 DNA MER1_type 0 219 2 27 62 0 0 chr18 21540478 21540526 -65137022 + AT_rich Low_complexity Low_complexity 1 48 0 216 0 0 0 chr18 21541872 21541896 -65135652 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2211 93 0 0 chr18 21541903 21542181 -65135367 - AluSg SINE Alu -32 278 1 597 111 33 0 chr18 21542348 21542438 -65135110 + L1MA4A LINE L1 2369 2461 -4388 416 105 0 0 chr18 21542438 21542495 -65135053 + AluJ/FLAM SINE Alu 1 57 -255 12831 153 47 29 chr18 21542496 21544216 -65133332 + L1MA4A LINE L1 3287 4976 -2029 2266 108 0 0 chr18 21544216 21544522 -65133026 - AluSx SINE Alu -6 306 1 12831 153 47 29 chr18 21544522 21545678 -65131870 + L1MA4A LINE L1 4976 6255 -750 2271 96 0 0 chr18 21545678 21545971 -65131577 - AluSg SINE Alu -17 293 1 12831 153 47 29 chr18 21545971 21546724 -65130824 + L1MA4A LINE L1 6255 6993 -12 576 159 108 11 chr18 21546761 21546937 -65130611 + L1MC1 LINE L1 2384 2576 -3964 * 2544 168 27 76 chr18 21546932 21547195 -65130353 + L1MC1 LINE L1 5129 5403 -1324 2238 75 7 10 chr18 21547195 21547489 -65130059 + AluY SINE Alu 2 294 -17 2544 168 27 76 chr18 21547489 21547853 -65129695 + L1MC1 LINE L1 5403 5783 -944 1904 136 0 11 chr18 21547853 21548139 -65129409 + AluJb SINE Alu 5 287 -25 2544 168 27 76 chr18 21548139 21548632 -65128916 + L1MC1 LINE L1 5783 6299 -428 2245 76 36 7 chr18 21548632 21548935 -65128613 + AluSx SINE Alu 1 312 0 1549 199 39 0 chr18 21548938 21549220 -65128328 + AluJb SINE Alu 1 293 -19 2544 168 27 76 chr18 21549220 21549266 -65128282 + L1MC1 LINE L1 6301 6348 -379 2299 94 3 0 chr18 21549266 21549564 -65127984 + AluSp SINE Alu 1 299 -14 2544 168 27 76 chr18 21549564 21550044 -65127504 + L1MC1 LINE L1 6348 6689 -38 2146 95 0 11 chr18 21550044 21550358 -65127190 + AluSg SINE Alu 1 311 0 2544 168 27 76 chr18 21550358 21550395 -65127153 + L1MC1 LINE L1 6689 6726 -1 347 208 88 24 chr18 21550431 21550556 -65126992 + HAL1 LINE L1 1364 1496 -1011 539 143 0 67 chr18 21550556 21550661 -65126887 + AluS SINE Alu 1 98 -215 * 687 90 0 0 chr18 21550658 21550747 -65126801 + AluSp/q SINE Alu 203 291 -22 781 209 12 17 chr18 21550747 21550919 -65126629 + HAL1 LINE L1 1488 1658 -849 611 259 166 31 chr18 21550932 21551252 -65126296 + HAL1 LINE L1 1815 2177 -330 273 228 35 0 chr18 21551261 21551318 -65126230 - LTR16B LTR ERVL 0 464 406 716 293 57 19 chr18 21551445 21551657 -65125891 - LTR16B LTR ERVL -240 224 5 225 299 13 0 chr18 21551678 21551755 -65125793 + HAL1 LINE L1 2430 2507 0 873 203 6 0 chr18 21551762 21551925 -65125623 + FAM SINE Alu 4 167 -8 326 278 110 66 chr18 21552419 21552464 -65125084 + MIR SINE MIR 25 67 -195 2831 6 0 6 chr18 21552464 21552777 -65124771 + AluY SINE Alu 1 311 0 326 278 110 66 chr18 21552777 21552958 -65124590 + MIR SINE MIR 67 261 -1 405 185 0 0 chr18 21553448 21553513 -65124035 - AluJ/FLAM SINE Alu -245 67 3 22 35 0 0 chr18 21553526 21553555 -65123993 + AT_rich Low_complexity Low_complexity 1 29 0 1762 132 4 4 chr18 21553641 21553891 -65123657 - AluSx SINE Alu -60 252 3 309 174 54 76 chr18 21553986 21554078 -65123470 - L1MC4 LINE L1 -1339 6703 6614 442 113 47 0 chr18 21554080 21554186 -65123362 + (TA)n Simple_repeat Simple_repeat 1 111 0 325 194 32 54 chr18 21554186 21554279 -65123269 - L1MC4 LINE L1 -1338 6704 6614 307 73 36 0 chr18 21554281 21554336 -65123212 + (TA)n Simple_repeat Simple_repeat 1 57 0 224 250 101 54 chr18 21554745 21554893 -65122655 - MIR SINE MIR -1 261 107 833 167 83 0 chr18 21555064 21555220 -65122328 + AluJb SINE Alu 132 300 -12 3807 115 9 72 chr18 21555874 21556069 -65121479 - Tigger4(Zombi) DNA MER2_type -1 2730 2524 1997 133 0 3 chr18 21556069 21556382 -65121166 - AluSx SINE Alu 0 312 1 3807 115 9 72 chr18 21556382 21556882 -65120666 - Tigger4(Zombi) DNA MER2_type -207 2524 2078 1018 147 19 0 chr18 21556874 21557031 -65120517 - Tigger4(Zombi) DNA MER2_type -2571 160 1 * 1246 256 30 10 chr18 21557032 21557434 -65120114 + L1M4 LINE L1 2374 2783 -3363 993 169 108 0 chr18 21557427 21557640 -65119908 + L1MB4 LINE L1 5930 6165 -15 * 4631 223 62 95 chr18 21557670 21559122 -65118426 + L1M4 LINE L1 2775 4273 -1873 8514 93 17 92 chr18 21559122 21560616 -65116932 + SVA Other Other 6 1386 0 4631 223 62 95 chr18 21560616 21560904 -65116644 + L1M4 LINE L1 4273 4569 -1577 2279 88 3 0 chr18 21560904 21561215 -65116333 + AluSp SINE Alu 1 312 0 4631 223 62 95 chr18 21561215 21561382 -65116166 + L1M4 LINE L1 4569 4740 -1406 880 184 30 6 chr18 21561382 21561550 -65115998 + FAM SINE Alu 1 172 -3 4631 223 62 95 chr18 21561550 21561885 -65115663 + L1M4 LINE L1 4740 4946 -1200 293 231 11 11 chr18 21561901 21561992 -65115556 - L1MDa LINE L1 -3316 2764 2674 * 814 256 35 24 chr18 21561987 21562430 -65115118 - L1MDa LINE L1 -3652 2428 1922 765 209 6 79 chr18 21562430 21562607 -65114941 - MER20 DNA MER1_type 0 219 56 318 296 54 15 chr18 21562622 21562825 -65114723 - L1MDa LINE L1 -4184 1896 1686 1957 120 33 7 chr18 21562861 21563162 -65114386 + AluSc SINE Alu 1 309 0 2537 225 58 27 chr18 21563183 21563974 -65113574 - L1MDa LINE L1 -4397 1683 848 1686 161 35 18 chr18 21563974 21564259 -65113289 - AluJb SINE Alu -22 290 1 2537 225 58 27 chr18 21564259 21564464 -65113084 - L1MDa LINE L1 -5232 848 651 1130 77 7 0 chr18 21564479 21564622 -65112926 + AluY SINE Alu 1 144 -167 5014 128 104 29 chr18 21564624 21566065 -65111483 + pTR5 LTR ERV1 745 2438 0 1079 102 13 0 chr18 21566071 21566228 -65111320 + AluY SINE Alu 144 302 -9 446 294 41 65 chr18 21566234 21566527 -65111021 - L1MDa LINE L1 -5404 666 381 * 575 296 79 81 chr18 21566507 21567003 -65110545 - L1MDa LINE L1 -5573 497 3 1614 199 0 17 chr18 21567035 21567337 -65110211 + AluJb SINE Alu 1 297 -15 1758 171 16 29 chr18 21568553 21568869 -65108679 - AluJb SINE Alu 0 312 1 1843 146 3 40 chr18 21569439 21569764 -65107784 - AluSx SINE Alu 0 314 1 2500 164 5 5 chr18 21570004 21570448 -65107100 + L1MB3 LINE L1 5738 6181 -2 1079 216 34 41 chr18 21570453 21570638 -65106910 + L1ME3 LINE L1 5860 6044 -118 2336 68 0 3 chr18 21570638 21570931 -65106617 + AluY SINE Alu 1 292 -19 1079 216 34 41 chr18 21570931 21571036 -65106512 + L1ME3 LINE L1 6044 6148 -14 228 141 47 31 chr18 21571042 21571106 -65106442 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 2301 90 3 3 chr18 21571154 21571455 -65106093 + AluSc SINE Alu 1 301 -8 1455 182 0 56 chr18 21571563 21571832 -65105716 + AluJo SINE Alu 37 290 -22 325 324 81 20 chr18 21572066 21572362 -65105186 + HAL1b LINE L1 148 461 -887 1216 132 0 92 chr18 21572937 21573164 -65104384 + AluJo SINE Alu 4 209 -103 912 151 151 11 chr18 21573164 21573343 -65104205 + AluJo SINE Alu 84 287 -25 232 236 42 0 chr18 21573444 21573516 -65104032 - MER113 DNA MER1_type? -306 215 141 2007 136 17 10 chr18 21574113 21574415 -65103133 - AluSx SINE Alu -8 304 1 901 213 81 69 chr18 21574539 21574737 -65102811 - MER113 DNA MER1_type? -44 477 283 1776 163 7 7 chr18 21574737 21575037 -65102511 - AluJb SINE Alu -12 300 1 901 213 81 69 chr18 21575037 21575260 -65102288 - MER113 DNA MER1_type? -238 283 51 327 277 142 0 chr18 21575527 21575682 -65101866 + MER104 DNA MER2_type 4 180 0 1911 164 0 3 chr18 21575933 21576225 -65101323 + AluJo SINE Alu 1 291 -21 29 47 0 0 chr18 21576269 21576312 -65101236 + AT_rich Low_complexity Low_complexity 1 43 0 333 349 135 31 chr18 21576357 21576684 -65100864 + L1ME4a LINE L1 4632 4992 -1154 21 0 0 0 chr18 21576685 21576706 -65100842 + AT_rich Low_complexity Low_complexity 1 21 0 2267 70 7 7 chr18 21576790 21577092 -65100456 - AluSx SINE Alu -10 302 1 529 111 49 0 chr18 21577135 21577216 -65100332 + U6 snRNA snRNA 2 86 -21 24 0 0 0 chr18 21577263 21577287 -65100261 + AT_rich Low_complexity Low_complexity 1 24 0 341 274 65 39 chr18 21577333 21577486 -65100062 + L1ME4a LINE L1 5282 5438 -683 2129 122 6 3 chr18 21577540 21577851 -65099697 + AluSx SINE Alu 1 312 0 266 261 0 0 chr18 21578812 21578881 -65098667 + L1ME4a LINE L1 5754 5822 -299 521 237 46 7 chr18 21578971 21579123 -65098425 + L1ME4a LINE L1 5964 6121 0 458 246 95 58 chr18 21580989 21581465 -65096083 - MLT1H LTR MaLR -13 536 1 1782 154 42 3 chr18 21581794 21582080 -65095468 - AluJo SINE Alu -15 297 1 1893 154 14 3 chr18 21582369 21582661 -65094887 - AluJb SINE Alu -13 299 5 281 247 330 31 chr18 21582846 21583040 -65094508 + MIR SINE MIR 7 258 -4 549 122 0 0 chr18 21583193 21583283 -65094265 - AluS SINE Alu 0 310 221 2755 7 0 0 chr18 21583383 21583679 -65093869 + AluY SINE Alu 15 310 -1 606 215 47 110 chr18 21583736 21583927 -65093621 + MIR SINE MIR 84 262 0 302 295 78 70 chr18 21584012 21584141 -65093407 - L2 LINE L2 0 3272 3143 2302 119 0 0 chr18 21584191 21584503 -65093045 + AluSx SINE Alu 1 312 0 2442 87 3 0 chr18 21584956 21585268 -65092280 - AluSp SINE Alu 0 313 1 1808 122 10 66 chr18 21585689 21585993 -65091555 - AluSx SINE Alu -25 287 1 255 300 12 0 chr18 21586918 21586998 -65090550 + (TAG)n Simple_repeat Simple_repeat 3 83 0 733 226 15 88 chr18 21587321 21587582 -65089966 + MER46C DNA MER2_type 2 243 -95 2521 133 0 0 chr18 21588168 21588553 -65088995 - L1MB3 LINE L1 -17 6166 5782 207 100 0 0 chr18 21588556 21588586 -65088962 + (CA)n Simple_repeat Simple_repeat 2 31 0 407 286 52 7 chr18 21588610 21588764 -65088784 - LTR33 LTR ERVL -58 463 303 230 299 33 92 chr18 21589838 21590142 -65087406 + L2 LINE L2 1912 2197 -1117 217 368 24 72 chr18 21590613 21590779 -65086769 + L2 LINE L2 2866 3023 -249 184 368 158 0 chr18 21590955 21591050 -65086498 + L2 LINE L2 3202 3311 -2 21 57 0 0 chr18 21591518 21591553 -65085995 + AT_rich Low_complexity Low_complexity 1 35 0 2510 49 0 16 chr18 21591614 21591918 -65085630 - AluY SINE Alu -12 299 1 1556 149 0 4 chr18 21592029 21592277 -65085271 + AluSx SINE Alu 55 301 -11 23 0 0 0 chr18 21592532 21592555 -65084993 + AT_rich Low_complexity Low_complexity 1 23 0 2283 103 0 0 chr18 21592881 21593182 -65084366 - AluSq SINE Alu -12 301 1 2441 77 0 3 chr18 21593428 21593739 -65083809 - AluY SINE Alu -1 310 1 282 355 97 16 chr18 21593789 21593913 -65083635 - L2 LINE L2 0 3272 3139 2440 76 3 0 chr18 21593940 21594244 -65083304 + AluY SINE Alu 1 305 -6 21 0 0 0 chr18 21594614 21594635 -65082913 + AT_rich Low_complexity Low_complexity 1 21 0 210 268 156 45 chr18 21594695 21594874 -65082674 - L2 LINE L2 -825 2489 2291 1609 198 97 20 chr18 21595102 21595437 -65082111 + Charlie4a DNA MER1_type 18 399 -1562 2245 102 0 26 chr18 21595437 21595742 -65081806 - AluSx SINE Alu -15 297 1 1609 198 97 20 chr18 21595742 21595861 -65081687 + Charlie4a DNA MER1_type 399 507 -1 8904 214 91 40 chr18 21596967 21597342 -65080206 + L1MD2 LINE L1 24 379 -6161 2378 68 7 16 chr18 21597342 21597650 -65079898 - AluY SINE Alu -6 305 1 8904 214 91 40 chr18 21597650 21599181 -65078367 + L1MD2 LINE L1 379 1831 -4709 1880 143 7 30 chr18 21599181 21599481 -65078067 + AluSx SINE Alu 1 293 -19 8904 214 91 40 chr18 21599481 21599676 -65077872 + L1MD2 LINE L1 1831 2015 -4525 2085 147 0 6 chr18 21599676 21599990 -65077558 + AluJb SINE Alu 1 312 0 8904 214 91 40 chr18 21599990 21601557 -65075991 + L1MD2 LINE L1 2015 3875 -2665 2480 196 25 12 chr18 21601584 21602103 -65075445 + L1MD2 LINE L1 5753 6278 -475 1132 53 0 0 chr18 21602119 21602250 -65075298 + AluSc SINE Alu 1 131 -178 1036 203 52 12 chr18 21602259 21602648 -65074900 + L1MD2 LINE L1 6270 6732 -21 203 247 148 12 chr18 21602659 21602740 -65074808 - MIR3 SINE MIR -6 202 111 1162 145 6 0 chr18 21602859 21603031 -65074517 + AluSx SINE Alu 1 173 -139 35 54 0 0 chr18 21603509 21603565 -65073983 + AT_rich Low_complexity Low_complexity 1 56 0 727 238 41 17 chr18 21603594 21603766 -65073782 - MER5B DNA MER1_type -1 177 2 443 278 17 100 chr18 21603828 21604127 -65073421 + L1MC4a LINE L1 5611 5884 -1924 1155 114 14 21 chr18 21605090 21605380 -65072168 - L1MB4 LINE L1 0 6180 5748 323 63 63 0 chr18 21605401 21605464 -65072084 - L1MB2 LINE L1 -2 6169 6103 2043 146 0 10 chr18 21605529 21605837 -65071711 - AluJo SINE Alu -7 305 1 313 319 141 7 chr18 21606648 21606783 -65070765 + MIR3 SINE MIR 54 206 -2 431 231 74 8 chr18 21607172 21607293 -65070255 - MER58C DNA MER1_type -60 155 27 878 113 188 54 chr18 21607529 21607715 -65069833 - MER46A DNA MER2_type -25 211 1 2547 221 57 96 chr18 21607715 21608392 -65069156 - L1MC5 LINE L1 -80 7881 7280 1887 164 7 0 chr18 21608392 21608691 -65068857 + AluJb SINE Alu 1 301 -11 2547 221 57 96 chr18 21608691 21609334 -65068214 - L1MC5 LINE L1 -681 7280 6613 2344 90 3 3 chr18 21609645 21609945 -65067603 - AluSc SINE Alu -8 301 2 3754 168 24 39 chr18 21609983 21610780 -65066768 - L1MB5 LINE L1 -1 7592 6808 1651 191 9 59 chr18 21610781 21610869 -65066679 - L1MB5 LINE L1 -1213 6352 6261 1898 159 0 3 chr18 21610869 21611170 -65066378 + AluJb SINE Alu 1 300 -12 1651 191 9 59 chr18 21611170 21611505 -65066043 - L1MB5 LINE L1 -1304 6261 5950 269 153 9 8 chr18 21611505 21611723 -65065825 + AluJb SINE Alu 1 296 -6 567 197 60 42 chr18 21611725 21611957 -65065591 - L1MB5 LINE L1 -1601 5964 5421 21 0 0 0 chr18 21612110 21612131 -65065417 + AT_rich Low_complexity Low_complexity 1 21 0 4344 169 143 57 chr18 21612259 21612523 -65065025 - L1MB5 LINE L1 -2346 5219 4979 2271 100 3 16 chr18 21612523 21612834 -65064714 + AluSx SINE Alu 1 307 -5 4344 169 143 57 chr18 21612834 21613295 -65064253 - L1MB5 LINE L1 -2586 4979 4559 2317 93 0 3 chr18 21613295 21613595 -65063953 + AluSq SINE Alu 1 299 -14 4344 169 143 57 chr18 21613595 21614812 -65062736 - L1MB5 LINE L1 -3006 4559 3062 274 100 25 0 chr18 21614810 21614850 -65062698 - L1MB5 LINE L1 -5852 1713 1673 * 6873 122 74 10 chr18 21614859 21616003 -65061545 - L1M1 LINE L1 -4925 2640 1099 744 121 57 0 chr18 21615991 21616115 -65061433 - L1M1 LINE L1 -7423 142 12 * 1328 106 48 0 chr18 21616116 21616324 -65061224 - L1MA6 LINE L1 0 6300 6083 262 227 55 86 chr18 21616356 21616519 -65061029 - L1M4 LINE L1 -967 5179 5022 1330 178 28 0 chr18 21616867 21617080 -65060468 - AluJo SINE Alu -93 219 1 30 45 0 0 chr18 21617080 21617124 -65060424 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr18 21617362 21617390 -65060158 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr18 21617550 21617579 -65059969 + AT_rich Low_complexity Low_complexity 1 29 0 2336 63 7 0 chr18 21618066 21618353 -65059195 + AluY SINE Alu 2 290 -21 1830 160 0 19 chr18 21619628 21619941 -65057607 + AluJo SINE Alu 1 307 -5 21 36 0 0 chr18 21620932 21620960 -65056588 + AT_rich Low_complexity Low_complexity 1 28 0 937 126 0 0 chr18 21620960 21621087 -65056461 - FLAM_C SINE Alu -16 127 1 250 318 23 39 chr18 21621581 21621710 -65055838 + L2 LINE L2 2291 2417 -897 443 290 138 38 chr18 21622105 21622446 -65055102 - L2 LINE L2 -1 3312 2938 383 309 36 14 chr18 21622471 21622610 -65054938 - L2 LINE L2 -561 2753 2612 1965 152 0 7 chr18 21622680 21622982 -65054566 + AluSx SINE Alu 1 300 -12 461 232 28 49 chr18 21622993 21623135 -65054413 - L2 LINE L2 -919 2395 2257 25 31 0 0 chr18 21623256 21623288 -65054260 + AT_rich Low_complexity Low_complexity 1 32 0 197 324 59 0 chr18 21623338 21623406 -65054142 + MIR SINE MIR 54 125 -137 190 50 75 125 chr18 21624219 21624259 -65053289 + L2 LINE L2 3224 3261 -52 1697 155 23 30 chr18 21624887 21625190 -65052358 + AluJb SINE Alu 1 301 -11 365 346 113 34 chr18 21625335 21625780 -65051768 - L2 LINE L2 0 3272 2773 1756 143 57 4 chr18 21625936 21626216 -65051332 - AluJb SINE Alu -17 295 1 1855 150 21 0 chr18 21628496 21628782 -65048766 + AluSx SINE Alu 1 292 -20 2351 81 0 3 chr18 21629639 21629935 -65047613 - AluY SINE Alu -16 295 1 2277 104 0 0 chr18 21630114 21630413 -65047135 - AluY SINE Alu -12 299 1 1925 215 55 56 chr18 21630413 21630998 -65046550 - L1ME2 LINE L1 -9 6155 5572 252 146 0 0 chr18 21631296 21631337 -65046211 - Charlie8 DNA MER1_type -2258 159 119 182 296 74 25 chr18 21631391 21631472 -65046076 - L2 LINE L2 -42 3271 3187 219 336 102 86 chr18 21631661 21631847 -65045701 - L2 LINE L2 -1143 2171 1989 2058 112 7 7 chr18 21631847 21632152 -65045396 + AluY SINE Alu 1 305 -6 219 336 102 86 chr18 21632152 21632337 -65045211 - L2 LINE L2 -1325 1989 1794 990 271 52 70 chr18 21632342 21632784 -65044764 + L2 LINE L2 2875 3308 -5 314 267 58 33 chr18 21632934 21633054 -65044494 - L2 LINE L2 0 3313 3191 556 253 149 6 chr18 21633448 21633622 -65043926 + L2 LINE L2 1276 1474 -1840 294 352 23 57 chr18 21633622 21633696 -65043852 - L2 LINE L2 -1277 2037 1962 2152 44 89 0 chr18 21633696 21633967 -65043581 + AluY SINE Alu 2 296 -15 294 352 23 57 chr18 21633967 21634068 -65043480 - L2 LINE L2 -1352 1962 1868 2916 279 159 28 chr18 21634072 21634188 -65043360 + L2 LINE L2 1476 1575 -1738 1978 125 17 3 chr18 21634188 21634476 -65043072 + AluSx SINE Alu 1 292 -20 2916 279 159 28 chr18 21634476 21634592 -65042956 + L2 LINE L2 1575 1674 -1639 2151 85 4 7 chr18 21634592 21634873 -65042675 + AluSp SINE Alu 3 282 -31 2916 279 159 28 chr18 21634873 21636051 -65041497 + L2 LINE L2 1674 3249 -64 495 0 0 0 chr18 21636051 21636106 -65041442 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1267 124 5 5 chr18 21636130 21636315 -65041233 - AluSg SINE Alu -125 185 1 417 39 0 0 chr18 21636419 21636470 -65041078 + (TG)n Simple_repeat Simple_repeat 2 52 0 223 182 23 0 chr18 21636547 21636591 -65040957 - L2 LINE L2 -2 3311 3267 543 259 70 60 chr18 21636756 21636957 -65040591 - MIR3 SINE MIR -3 205 3 21 0 0 0 chr18 21637446 21637467 -65040081 + AT_rich Low_complexity Low_complexity 1 21 0 560 313 50 11 chr18 21637957 21638139 -65039409 + MIR SINE MIR 48 236 -26 359 315 45 18 chr18 21638180 21638305 -65039243 - MIR SINE MIR -72 136 31 2005 124 7 3 chr18 21639166 21639464 -65038084 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr18 21639809 21639830 -65037718 + AT_rich Low_complexity Low_complexity 1 21 0 619 61 0 30 chr18 21642289 21642388 -65035160 + (TATG)n Simple_repeat Simple_repeat 1 96 0 1804 126 19 4 chr18 21642393 21642663 -65034885 - AluJb SINE Alu -38 274 1 424 226 235 0 chr18 21645844 21645959 -65031589 + FLAM_A SINE Alu 1 142 0 368 366 0 24 chr18 21646142 21646306 -65031242 + MIR SINE MIR 1 160 -102 21 57 0 0 chr18 21646707 21646742 -65030806 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr18 21647980 21648017 -65029531 + AT_rich Low_complexity Low_complexity 1 37 0 2387 82 0 0 chr18 21648260 21648553 -65028995 + AluSq SINE Alu 1 293 -20 507 50 87 12 chr18 21648553 21648810 -65028738 + (TA)n Simple_repeat Simple_repeat 1 276 0 1170 194 5 5 chr18 21648834 21649050 -65028498 - MER2 DNA MER2_type -129 216 1 23 33 0 0 chr18 21649314 21649344 -65028204 + AT_rich Low_complexity Low_complexity 1 30 0 2800 209 79 29 chr18 21649588 21649725 -65027823 - L1ME2 LINE L1 -9 6155 6026 723 163 32 0 chr18 21649725 21649848 -65027700 + FLAM_C SINE Alu 1 127 -6 2800 209 79 29 chr18 21649848 21649888 -65027660 - L1ME2 LINE L1 -138 6026 5989 2312 87 0 16 chr18 21649888 21650197 -65027351 + AluSg SINE Alu 1 304 -6 2800 209 79 29 chr18 21650197 21650964 -65026584 - L1ME2 LINE L1 -175 5989 5169 1128 176 96 8 chr18 21651191 21651430 -65026118 - MER2 DNA MER2_type 0 345 86 248 154 19 0 chr18 21651452 21651504 -65026044 + CT-rich Low_complexity Low_complexity 2 54 0 243 191 0 0 chr18 21651517 21651559 -65025989 - MER2 DNA MER2_type -303 42 1 377 86 35 0 chr18 21651564 21651622 -65025926 - L1M4 LINE L1 -1922 4224 4165 * 3539 172 64 33 chr18 21651613 21652379 -65025169 - L1MD2 LINE L1 -232 6127 5338 22 35 0 0 chr18 21653049 21653078 -65024470 + AT_rich Low_complexity Low_complexity 1 29 0 2148 94 3 14 chr18 21653092 21653379 -65024169 - AluSx SINE Alu -28 284 1 2657 57 0 0 chr18 21654538 21654869 -65022679 - L1PA7 LINE L1 -2 6152 5822 2208 107 10 10 chr18 21654876 21655176 -65022372 - AluSx SINE Alu -12 300 1 360 0 0 0 chr18 21655248 21655288 -65022260 + (TTCA)n Simple_repeat Simple_repeat 3 42 0 2106 110 3 0 chr18 21655288 21655570 -65021978 - AluSx SINE Alu -28 284 2 328 276 35 76 chr18 21655609 21655754 -65021794 - MIR SINE MIR -110 152 14 1732 192 109 17 chr18 21657992 21658414 -65019134 + LTR40b LTR ERVL 1 461 -1 270 321 12 0 chr18 21658892 21658906 -65018642 - LTR67 LTR ERVL -377 180 100 278 167 30 61 chr18 21658906 21658972 -65018576 - MLT1J2 LTR MaLR -327 123 60 485 238 300 3 chr18 21659254 21659544 -65018004 - L1ME2 LINE L1 -1122 5024 4649 2463 67 0 7 chr18 21659544 21659844 -65017704 - AluSq SINE Alu -13 300 3 354 195 232 0 chr18 21660035 21660117 -65017431 - AluJ/FLAM SINE Alu -201 101 1 2060 97 0 14 chr18 21660836 21661115 -65016433 + AluY SINE Alu 1 275 -36 216 0 0 0 chr18 21661119 21661143 -65016405 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1761 142 0 7 chr18 21661239 21661538 -65016010 - AluSq SINE Alu 0 307 11 290 297 0 47 chr18 21661559 21661707 -65015841 + T-rich Low_complexity Low_complexity 5 145 0 1163 172 4 0 chr18 21662079 21684039 -64993509 - ALR/Alpha Satellite centromeric 0 22042 1 1132 201 97 3 chr18 21684151 21684450 -64993098 + L1M4 LINE L1 4957 5283 -863 1840 164 17 0 chr18 21684793 21685080 -64992468 + AluJb SINE Alu 3 294 -18 365 262 110 34 chr18 21685310 21685547 -64992001 + L1 LINE L1 2110 2364 -3782 2393 68 3 3 chr18 21685746 21686042 -64991506 - AluY SINE Alu -15 296 1 888 144 19 12 chr18 21686286 21686446 -64991102 + BC200 scRNA scRNA 1 161 -39 2243 90 0 7 chr18 21686994 21687293 -64990255 + AluSq SINE Alu 17 313 0 1695 169 15 0 chr18 21687441 21687714 -64989834 + AluSx SINE Alu 1 277 -35 249 33 0 0 chr18 21687721 21687751 -64989797 + (TAAAA)n Simple_repeat Simple_repeat 4 33 0 3290 145 19 52 chr18 21687806 21688358 -64989190 - L1MB3 LINE L1 -344 5839 5311 2241 118 0 7 chr18 21688358 21688663 -64988885 - AluSx SINE Alu -9 303 1 3290 145 19 52 chr18 21688663 21688905 -64988643 - L1MB3 LINE L1 -872 5311 5063 25 31 0 0 chr18 21688967 21688999 -64988549 + AT_rich Low_complexity Low_complexity 1 32 0 519 60 0 0 chr18 21689114 21689181 -64988367 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 1269 142 13 11 chr18 21689833 21690097 -64987451 + AluJo SINE Alu 3 314 0 1077 264 100 38 chr18 21690348 21690817 -64986731 + LTR33A LTR ERVL 2 499 -24 536 191 9 126 chr18 21690832 21690937 -64986611 + MER112 DNA MER1_type 64 133 -127 1698 161 4 11 chr18 21690937 21691216 -64986332 - AluJb SINE Alu -22 290 14 536 191 9 126 chr18 21691216 21691325 -64986223 + MER112 DNA MER1_type 133 253 -7 586 153 10 10 chr18 21691567 21691665 -64985883 - Tigger7 DNA MER2_type -1 2586 2489 304 149 21 0 chr18 21691663 21691710 -64985838 - Tigger7 DNA MER2_type -284 266 219 * 7938 88 20 156 chr18 21691716 21691895 -64985653 + Tigger1 DNA MER2_type 2 204 -2214 2311 84 0 26 chr18 21691895 21692203 -64985345 - AluSg SINE Alu -10 300 1 7938 88 20 156 chr18 21692203 21692508 -64985040 + Tigger1 DNA MER2_type 204 549 -1869 2387 104 0 0 chr18 21692508 21692816 -64984732 - AluSg SINE Alu -2 308 1 7938 88 20 156 chr18 21692816 21692945 -64984603 + Tigger1 DNA MER2_type 549 694 -1724 2404 96 0 10 chr18 21692945 21693258 -64984290 - AluSx SINE Alu -2 310 1 7938 88 20 156 chr18 21693258 21693658 -64983890 + Tigger1 DNA MER2_type 694 1147 -1271 905 135 23 0 chr18 21693658 21693791 -64983757 - AluJo SINE Alu -176 136 1 7938 88 20 156 chr18 21693791 21693996 -64983552 + Tigger1 DNA MER2_type 1147 1378 -1040 1465 151 0 0 chr18 21693996 21694214 -64983334 + AluSg/x SINE Alu 85 302 -10 7938 88 20 156 chr18 21694214 21694368 -64983180 + Tigger1 DNA MER2_type 1378 1551 -867 2246 105 3 0 chr18 21694368 21694663 -64982885 + AluSq SINE Alu 1 296 -17 7938 88 20 156 chr18 21694663 21694750 -64982798 + Tigger1 DNA MER2_type 1551 1379 -1039 2079 100 4 7 chr18 21694750 21695029 -64982519 + AluSp SINE Alu 22 299 -14 7938 88 20 156 chr18 21695029 21695052 -64982496 + Tigger1 DNA MER2_type 1378 1402 -1016 2323 96 3 13 chr18 21695358 21695672 -64981876 - AluSx SINE Alu -1 311 1 1843 221 38 19 chr18 21695674 21696249 -64981299 - L1M4 LINE L1 -1389 4757 4172 434 250 31 23 chr18 21696236 21696364 -64981184 - L1MEc LINE L1 -3328 3212 3084 * 632 326 32 9 chr18 21696355 21696695 -64980853 - L1MEc LINE L1 -4824 1897 1550 1877 169 28 14 chr18 21696722 21697078 -64980470 + THE1C LTR MaLR 15 375 0 289 248 46 9 chr18 21697078 21697187 -64980361 - L1MEc LINE L1 -5024 1516 1404 907 299 129 22 chr18 21697192 21697604 -64979944 + LTR16B LTR ERVL 1 456 -8 909 338 39 34 chr18 21697617 21697838 -64979710 + HERV16 LTR ERVL 7 225 -4771 2044 134 7 0 chr18 21697838 21698137 -64979411 + AluSx SINE Alu 1 301 -11 909 338 39 34 chr18 21698137 21698474 -64979074 + HERV16 LTR ERVL 225 568 -4428 636 285 84 57 chr18 21698665 21698992 -64978556 + LTR16B LTR ERVL 8 414 -50 3290 67 17 34 chr18 21698998 21699239 -64978309 + L1PB2 LINE L1 5381 5612 -539 2038 130 3 32 chr18 21699239 21699547 -64978001 + AluSx SINE Alu 1 299 -13 3290 67 17 34 chr18 21699547 21699771 -64977777 + L1PB2 LINE L1 5612 5838 -313 2048 109 46 3 chr18 21699887 21700170 -64977378 - AluSq SINE Alu -18 295 1 350 311 10 6 chr18 21700240 21700387 -64977161 - MIR SINE MIR -68 140 3 1207 134 0 0 chr18 21700433 21700605 -64976943 + FRAM SINE Alu 1 169 -7 579 284 57 48 chr18 21700913 21701142 -64976406 - MIR SINE MIR -13 249 19 2670 203 38 84 chr18 21701339 21701799 -64975749 + L1ME LINE L1 4519 4999 -1167 2147 147 0 0 chr18 21701799 21702111 -64975437 + AluSx SINE Alu 1 312 0 2670 203 38 84 chr18 21702111 21702441 -64975107 + L1ME LINE L1 4999 5343 -823 2063 153 0 6 chr18 21702441 21702755 -64974793 + AluJo SINE Alu 1 312 0 2670 203 38 84 chr18 21702755 21703094 -64974454 + L1ME LINE L1 5343 5598 -568 2423 61 0 3 chr18 21703094 21703390 -64974158 + AluY SINE Alu 2 296 -15 2670 203 38 84 chr18 21703390 21703490 -64974058 + L1ME LINE L1 5598 5701 -465 938 176 0 28 chr18 21704036 21704218 -64973330 + FRAM SINE Alu 1 175 -1 1914 162 0 0 chr18 21704309 21704599 -64972949 - AluSx SINE Alu -22 290 1 2129 102 3 3 chr18 21705652 21705959 -64971589 - AluSx SINE Alu 0 307 1 885 299 105 19 chr18 21706610 21707028 -64970520 - LTR16B LTR ERVL 0 464 11 2032 125 28 3 chr18 21707283 21707571 -64969977 + AluSq SINE Alu 1 295 -18 662 232 0 26 chr18 21707956 21708107 -64969441 - L1ME LINE L1 -3386 2694 2548 183 188 31 0 chr18 21708108 21708140 -64969408 - MIR SINE MIR -195 67 35 511 125 0 0 chr18 21708154 21708218 -64969330 + FLAM_A SINE Alu 20 83 -59 186 286 0 20 chr18 21708219 21708268 -64969280 - MIR SINE MIR -213 49 2 24 32 0 0 chr18 21708526 21708557 -64968991 + AT_rich Low_complexity Low_complexity 1 31 0 426 298 46 112 chr18 21708625 21708832 -64968716 + L2 LINE L2 2965 3147 -125 2480 73 0 0 chr18 21708832 21709132 -64968416 - AluSx SINE Alu -12 300 1 426 298 46 112 chr18 21709132 21709229 -64968319 + L2 LINE L2 3147 3249 -23 248 352 23 31 chr18 21709712 21709840 -64967708 + L2 LINE L2 3179 3305 -8 1918 140 3 7 chr18 21710847 21711133 -64966415 + AluJb SINE Alu 11 295 -17 2225 129 0 0 chr18 21711133 21711444 -64966104 + AluSx SINE Alu 1 311 -1 1186 129 6 0 chr18 21711629 21711792 -64965756 + AluSx SINE Alu 1 164 -148 1919 125 14 3 chr18 21711899 21712188 -64965360 + L1PB2 LINE L1 5858 6149 -2 256 295 16 0 chr18 21712189 21712250 -64965298 + LTR16B LTR ERVL 403 464 0 635 185 13 20 chr18 21712250 21712401 -64965147 - L1ME LINE L1 -5124 946 797 406 161 23 46 chr18 21712680 21712767 -64964781 + L1MD3 LINE L1 7866 7950 -45 352 365 30 13 chr18 21713004 21713234 -64964314 + L2 LINE L2 2154 2387 -927 1092 159 0 0 chr18 21713477 21713647 -64963901 - FRAM SINE Alu 0 176 7 22 0 0 0 chr18 21714642 21714664 -64962884 + AT_rich Low_complexity Low_complexity 1 22 0 413 302 33 28 chr18 21714699 21714881 -64962667 + L2 LINE L2 2357 2539 -775 2476 85 0 0 chr18 21714885 21715192 -64962356 + AluSg SINE Alu 1 307 -3 276 91 0 0 chr18 21715192 21715236 -64962312 + (TA)n Simple_repeat Simple_repeat 1 44 0 355 246 105 0 chr18 21715245 21715359 -64962189 + L2 LINE L2 2533 2658 -656 195 42 0 0 chr18 21716112 21716136 -64961412 + (T)n Simple_repeat Simple_repeat 1 24 0 653 267 35 32 chr18 21716499 21716730 -64960818 - MIR SINE MIR -12 250 21 2244 74 0 14 chr18 21717430 21717737 -64959811 - AluSc SINE Alu 0 303 1 6991 179 18 195 chr18 21718186 21718831 -64958717 - L1M2 LINE L1 -4475 2374 1616 2025 138 10 0 chr18 21718831 21719127 -64958421 - AluSx SINE Alu -9 303 5 6991 179 18 195 chr18 21719127 21719287 -64958261 - L1M2 LINE L1 -5233 1616 1429 575 128 81 0 chr18 21719287 21719373 -64958175 - AluJ/FLAM SINE Alu -219 93 1 6991 179 18 195 chr18 21719373 21721363 -64956185 - L1M2 LINE L1 -5420 1429 5 584 251 17 17 chr18 21721371 21721550 -64955998 - L1MDa LINE L1 -4173 2367 2189 2256 102 3 10 chr18 21721617 21721922 -64955626 + AluSx SINE Alu 1 303 -9 1276 210 24 4 chr18 21721925 21722177 -64955371 + MLT1E1 LTR MaLR 398 654 0 696 210 70 0 chr18 21722182 21722325 -64955223 - L1MDa LINE L1 -5715 1006 854 1680 34 34 15 chr18 21722583 21722787 -64954761 - L1PA5 LINE L1 -1 6153 5946 2356 94 0 3 chr18 21723028 21723336 -64954212 - AluSx SINE Alu -4 308 2 28 29 0 0 chr18 21723345 21723380 -64954168 + AT_rich Low_complexity Low_complexity 1 35 0 678 300 163 22 chr18 21723794 21724157 -64953391 - MLT1K LTR MaLR -161 427 14 681 172 0 47 chr18 21724402 21724530 -64953018 + FLAM_C SINE Alu 6 127 -16 1714 155 0 56 chr18 21724783 21724929 -64952619 + AluJo SINE Alu 1 122 -190 2254 81 3 0 chr18 21724929 21725235 -64952313 + AluSp SINE Alu 1 307 0 1714 155 0 56 chr18 21725235 21725410 -64952138 + AluJo SINE Alu 122 305 -7 2023 97 52 7 chr18 21725700 21725989 -64951559 + AluSx SINE Alu 1 302 -10 2233 110 0 10 chr18 21726336 21726636 -64950912 + AluSx SINE Alu 1 297 -15 5017 256 76 34 chr18 21727803 21727899 -64949649 - HAL1 LINE L1 -677 1830 1739 2314 75 7 13 chr18 21727899 21728206 -64949342 - AluY SINE Alu -6 305 1 5017 256 76 34 chr18 21728206 21728973 -64948575 - HAL1 LINE L1 -768 1739 1005 2166 138 38 30 chr18 21728973 21729343 -64948205 + THE1C LTR MaLR 1 373 -2 5017 256 76 34 chr18 21729343 21730150 -64947398 - HAL1 LINE L1 -1502 1005 80 2219 94 0 10 chr18 21730150 21730447 -64947101 + AluSc SINE Alu 1 294 -15 5017 256 76 34 chr18 21730447 21730530 -64947018 - HAL1 LINE L1 -2427 80 2 4078 136 11 7 chr18 21730954 21731573 -64945975 - L1MC1 LINE L1 -9 6393 5772 1525 177 6 93 chr18 21731573 21731906 -64945642 + AluJb SINE Alu 1 304 -8 398 167 35 35 chr18 21731912 21732056 -64945492 + GA-rich Low_complexity Low_complexity 2 145 0 3171 232 26 27 chr18 21732066 21732809 -64944739 - L1MC1 LINE L1 -764 5451 4726 2170 121 0 0 chr18 21732809 21733107 -64944441 - AluSx SINE Alu -14 298 1 3171 232 26 27 chr18 21733107 21733204 -64944344 - L1MC1 LINE L1 -1489 4726 4630 1870 100 0 0 chr18 21733311 21733550 -64943998 - AluSg/x SINE Alu -7 305 67 2318 107 3 0 chr18 21733616 21733925 -64943623 - AluSg SINE Alu 0 310 1 2105 128 10 0 chr18 21733925 21734222 -64943326 - AluSx SINE Alu -8 304 5 1360 210 45 56 chr18 21734223 21734580 -64942968 - L1MC1 LINE L1 -6008 388 36 227 309 137 51 chr18 21734586 21734761 -64942787 + L2 LINE L2 2906 3095 -177 2597 176 46 53 chr18 21734952 21735028 -64942520 - MLT2B1 LTR ERVL 0 520 445 2337 98 0 7 chr18 21735028 21735325 -64942223 - AluSg SINE Alu -15 295 1 2106 123 0 0 chr18 21735329 21735631 -64941917 - AluSx SINE Alu -10 302 1 2597 176 46 53 chr18 21735631 21736073 -64941475 - MLT2B1 LTR ERVL -78 442 1 347 283 66 9 chr18 21736430 21736536 -64941012 - L2 LINE L2 -1 3312 3201 201 233 0 0 chr18 21736770 21736813 -64940735 + GA-rich Low_complexity Low_complexity 4 46 0 2415 64 7 0 chr18 21736855 21737152 -64940396 + AluY SINE Alu 1 299 -12 801 133 62 0 chr18 21737495 21737608 -64939940 - FLAM_C SINE Alu -13 120 1 1659 171 3 35 chr18 21738888 21739203 -64938345 - AluJb SINE Alu -3 309 5 240 35 0 0 chr18 21739384 21739413 -64938135 + (TG)n Simple_repeat Simple_repeat 2 30 0 2732 148 9 19 chr18 21739564 21739996 -64937552 + MSTA LTR MaLR 1 428 0 1900 163 3 7 chr18 21741381 21741688 -64935860 - AluJb SINE Alu -6 306 1 289 208 125 0 chr18 21741769 21741841 -64935707 + MER96 DNA MER1_type? 5 85 -90 408 274 9 0 chr18 21741899 21742012 -64935536 + L1MB8 LINE L1 6064 6177 -1 278 378 31 31 chr18 21742103 21742230 -64935318 + L2 LINE L2 3139 3265 -7 620 154 74 20 chr18 21742910 21743059 -64934489 + L1MB8 LINE L1 5953 6109 -69 1783 145 37 0 chr18 21743065 21743334 -64934214 + AluSg SINE Alu 1 279 -31 252 0 0 0 chr18 21743336 21743364 -64934184 + (CA)n Simple_repeat Simple_repeat 2 29 0 204 250 0 0 chr18 21743390 21743438 -64934110 + (TA)n Simple_repeat Simple_repeat 1 48 0 261 0 0 0 chr18 21743438 21743467 -64934081 + (TG)n Simple_repeat Simple_repeat 2 30 0 339 324 248 15 chr18 21743626 21743888 -64933660 + L2 LINE L2 2918 3240 -32 186 43 0 0 chr18 21744082 21744105 -64933443 + (TTATA)n Simple_repeat Simple_repeat 2 24 0 876 155 8 0 chr18 21744160 21744289 -64933259 - FLAM_C SINE Alu -3 130 1 367 102 0 0 chr18 21744412 21744471 -64933077 + AluSp/q SINE Alu 245 303 0 345 254 34 8 chr18 21745563 21745681 -64931867 - L1ME4a LINE L1 -35 6086 5966 1540 202 3 0 chr18 21745901 21746183 -64931365 - AluJb SINE Alu -14 298 16 2450 89 0 9 chr18 21746229 21746545 -64931003 - AluSp SINE Alu 0 313 1 381 305 17 0 chr18 21746822 21746940 -64930608 + MIR SINE MIR 72 191 -71 247 291 120 43 chr18 21747161 21747278 -64930270 - L2 LINE L2 -1 3271 3146 688 248 20 25 chr18 21747332 21747344 -64930204 - L2 LINE L2 0 3313 3302 561 115 0 0 chr18 21747344 21747431 -64930117 + (TCCA)n Simple_repeat Simple_repeat 1 87 0 688 248 20 25 chr18 21747431 21747616 -64929932 - L2 LINE L2 -11 3302 3117 2404 83 0 10 chr18 21747673 21747974 -64929574 - AluY SINE Alu -13 298 1 811 199 31 12 chr18 21748041 21748202 -64929346 + AluJb SINE Alu 130 293 -19 328 254 130 24 chr18 21748215 21748384 -64929164 + L1M4 LINE L1 5043 5229 -917 1812 145 44 3 chr18 21748384 21748680 -64928868 - AluJo SINE Alu 0 312 5 192 152 0 0 chr18 21748701 21748734 -64928814 + (CA)n Simple_repeat Simple_repeat 1 33 0 1751 154 35 49 chr18 21748758 21748992 -64928556 - MLT2C1 LTR ERVL -58 339 109 2136 98 0 14 chr18 21748992 21749302 -64928246 - AluSq SINE Alu 0 306 1 1751 154 35 49 chr18 21749302 21749410 -64928138 - MLT2C1 LTR ERVL -288 109 1 1353 181 5 0 chr18 21749626 21749840 -64927708 + Tigger7 DNA MER2_type 2 216 -2271 5031 116 39 88 chr18 21749840 21749950 -64927598 - Tigger1 DNA MER2_type 0 2418 2304 2023 112 11 0 chr18 21749950 21750271 -64927277 - AluSg SINE Alu 0 324 1 5031 116 39 88 chr18 21750271 21750522 -64927026 - Tigger1 DNA MER2_type -114 2304 2042 2416 92 0 10 chr18 21750522 21750836 -64926712 - AluSx SINE Alu -1 311 1 5031 116 39 88 chr18 21750836 21751026 -64926522 - Tigger1 DNA MER2_type -376 2042 1844 1902 149 3 0 chr18 21751026 21751321 -64926227 - AluSx SINE Alu -9 303 8 5031 116 39 88 chr18 21751321 21751440 -64926108 - Tigger1 DNA MER2_type -574 1844 1721 2278 101 0 0 chr18 21751440 21751748 -64925800 - AluSc SINE Alu -1 308 1 5031 116 39 88 chr18 21751748 21752069 -64925479 - Tigger1 DNA MER2_type -697 1721 1472 2075 107 13 10 chr18 21752070 21752237 -64925311 - AluSq SINE Alu -13 300 130 2419 103 0 0 chr18 21752237 21752549 -64924999 - AluSq SINE Alu -1 312 1 2075 107 13 10 chr18 21752549 21752680 -64924868 - AluSq SINE Alu -183 130 1 297 0 0 0 chr18 21752790 21752823 -64924725 + (A)n Simple_repeat Simple_repeat 1 33 0 372 94 0 0 chr18 21752848 21752901 -64924647 - AluSc SINE Alu -1 298 246 2036 114 10 7 chr18 21753058 21753355 -64924193 - AluSq SINE Alu -15 298 1 239 240 94 73 chr18 21753439 21753535 -64924013 + L2 LINE L2 3215 3312 -1 21 0 0 0 chr18 21753973 21753994 -64923554 + GC_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr18 21753994 21754027 -64923521 + (CA)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr18 21754249 21754270 -64923278 + AT_rich Low_complexity Low_complexity 1 21 0 321 299 157 67 chr18 21755445 21756161 -64921387 - L1M2 LINE L1 -5456 1393 383 335 348 85 14 chr18 21757847 21757988 -64919560 + MIR3 SINE MIR 49 199 -9 2112 84 7 25 chr18 21759115 21759443 -64918105 - AluY SINE Alu 0 323 1 300 328 118 15 chr18 21759532 21759727 -64917821 + MIR SINE MIR 1 215 -47 226 234 48 87 chr18 21761125 21761297 -64916251 + MIR SINE MIR 42 206 -56 327 261 77 31 chr18 21761413 21761543 -64916005 - MER5A DNA MER1_type -33 156 21 551 247 129 66 chr18 21761710 21761981 -64915567 - MER102a DNA MER1_type -1 329 42 661 273 60 51 chr18 21762075 21762287 -64915261 + L1ME LINE L1 5391 5609 -512 1290 191 0 0 chr18 21762287 21762496 -64915052 - MER3 DNA MER1_type 0 209 1 661 273 60 51 chr18 21762496 21762635 -64914913 + L1ME LINE L1 5609 5745 -376 491 252 43 0 chr18 21762894 21763009 -64914539 + MER5A DNA MER1_type 31 150 -39 322 237 145 89 chr18 21763088 21763151 -64914397 - L2 LINE L2 -35 3278 3220 2208 105 7 20 chr18 21763151 21763455 -64914093 + AluSq SINE Alu 1 300 -13 322 237 145 89 chr18 21763455 21763728 -64913820 - L2 LINE L2 -93 3220 2923 197 229 146 21 chr18 21763911 21764007 -64913541 + MER5B DNA MER1_type 20 127 -51 203 167 0 21 chr18 21764425 21764473 -64913075 + CT-rich Low_complexity Low_complexity 4 50 0 21 36 0 0 chr18 21764541 21764569 -64912979 + AT_rich Low_complexity Low_complexity 1 28 0 794 199 0 22 chr18 21764612 21764748 -64912800 + FLAM_C SINE Alu 1 133 0 2227 117 0 0 chr18 21765243 21765541 -64912007 + AluSg SINE Alu 1 298 -12 318 261 44 25 chr18 21765559 21765765 -64911783 + L1M4 LINE L1 5269 5472 -712 2346 80 3 7 chr18 21765856 21766157 -64911391 + AluSp SINE Alu 3 302 -11 996 118 0 7 chr18 21766166 21766301 -64911247 + AluSq/x SINE Alu 1 134 -179 2231 111 7 0 chr18 21766536 21766833 -64910715 - AluSx SINE Alu -9 303 5 1291 188 0 5 chr18 21767115 21767338 -64910210 - AluJo SINE Alu -4 308 87 2220 104 10 10 chr18 21767348 21767655 -64909893 - AluSx SINE Alu -5 307 1 588 300 141 23 chr18 21767953 21768393 -64909155 - MLT1L LTR MaLR -123 492 1 502 234 73 7 chr18 21768598 21768735 -64908813 - MER3 DNA MER1_type -63 146 1 199 253 89 25 chr18 21768772 21768851 -64908697 + MER5A DNA MER1_type 1 84 -105 2234 101 3 0 chr18 21769912 21770198 -64907350 + AluSx SINE Alu 17 303 -9 1228 72 0 13 chr18 21770288 21770440 -64907108 - AluY SINE Alu -161 150 1 22 56 0 0 chr18 21770975 21771011 -64906537 + AT_rich Low_complexity Low_complexity 1 36 0 600 265 37 37 chr18 21771039 21771228 -64906320 - MIR SINE MIR -71 191 3 397 178 67 11 chr18 21771507 21771597 -64905951 + L2 LINE L2 3213 3307 -6 27 62 0 0 chr18 21775025 21775073 -64902475 + AT_rich Low_complexity Low_complexity 1 48 0 351 278 104 29 chr18 21779433 21779606 -64897942 + L3 LINE CR1 1133 1318 -259 551 303 96 0 chr18 21779842 21780050 -64897498 + L3 LINE CR1 1345 1572 -5 1598 157 0 0 chr18 21780094 21780360 -64897188 - AluSg SINE Alu 0 310 45 2290 86 38 0 chr18 21780362 21780654 -64896894 - AluSx SINE Alu -9 303 1 270 292 106 35 chr18 21780694 21780807 -64896741 + L2 LINE L2 3142 3262 -10 202 295 83 62 chr18 21782529 21782722 -64894826 - L2 LINE L2 -234 3038 2842 640 293 96 13 chr18 21783145 21783374 -64894174 - MIR SINE MIR -13 249 2 24 0 0 0 chr18 21783540 21783564 -64893984 + AT_rich Low_complexity Low_complexity 1 24 0 1820 175 7 16 chr18 21783674 21783983 -64893565 + AluJo SINE Alu 1 306 -6 411 255 156 61 chr18 21784077 21784308 -64893240 - MLT1L LTR MaLR -322 293 41 242 246 263 0 chr18 21784403 21784521 -64893027 - MLT1I LTR MaLR -8 401 253 251 240 100 10 chr18 21784627 21784727 -64892821 - MLT1J2 LTR MaLR -341 109 1 32 0 0 0 chr18 21785208 21785240 -64892308 + AT_rich Low_complexity Low_complexity 1 32 0 2313 102 0 3 chr18 21785254 21785557 -64891991 + AluSx SINE Alu 1 302 -10 24 0 0 0 chr18 21785751 21785775 -64891773 + AT_rich Low_complexity Low_complexity 1 24 0 1290 181 0 4 chr18 21786311 21786537 -64891011 - MLT1A1 LTR MaLR 0 365 141 251 185 0 31 chr18 21786644 21786709 -64890839 - Alu SINE Alu 0 302 240 1406 101 6 0 chr18 21786729 21786908 -64890640 + AluSg/x SINE Alu 85 264 -46 522 283 29 0 chr18 21787016 21787154 -64890394 + MER58A DNA MER1_type 1 142 0 279 307 51 101 chr18 21787555 21787871 -64889677 + L2 LINE L2 1118 1417 -1897 282 198 44 0 chr18 21788027 21788118 -64889430 + GA-rich Low_complexity Low_complexity 3 97 0 2493 66 10 0 chr18 21788196 21788499 -64889049 - AluY SINE Alu -5 306 1 487 317 158 24 chr18 21788541 21788998 -64888550 + L2 LINE L2 1859 2376 -938 254 315 69 31 chr18 21789024 21789154 -64888394 + L2 LINE L2 3091 3225 -47 2297 88 0 0 chr18 21789369 21789704 -64887844 + AluSq SINE Alu 1 335 0 426 294 165 26 chr18 21790512 21790852 -64886696 - L1ME4a LINE L1 -211 5910 5524 959 147 27 0 chr18 21790922 21791072 -64886476 - FAM SINE Alu -22 163 10 3139 157 26 44 chr18 21791153 21791839 -64885709 - L1MC2 LINE L1 -26 6318 5645 1978 256 146 26 chr18 21791848 21792769 -64884779 - HAL1 LINE L1 -1473 1034 4 434 295 36 0 chr18 21793006 21793172 -64884376 + L1MB7 LINE L1 6003 6174 -10 1672 177 7 17 chr18 21793262 21793556 -64883992 + AluJo SINE Alu 1 291 -21 931 101 0 0 chr18 21793844 21793963 -64883585 - AluSg SINE Alu -191 119 1 263 300 42 47 chr18 21793968 21794158 -64883390 - L1ME LINE L1 -297 5824 5636 4468 159 27 65 chr18 21795228 21796408 -64881140 - L1MB7 LINE L1 -4 6180 5047 731 161 102 16 chr18 21797031 21797261 -64880287 - MER5C DNA MER1_type 0 324 1 400 279 10 0 chr18 21797643 21797747 -64879801 - MIR SINE MIR -13 249 145 1089 189 133 53 chr18 21797748 21798012 -64879536 - AluJo SINE Alu -17 285 1 2201 87 7 32 chr18 21798859 21799168 -64878380 - AluSq SINE Alu -12 301 1 2353 93 7 0 chr18 21799801 21800101 -64877447 - AluSq SINE Alu -11 302 1 1439 146 67 41 chr18 21800333 21800601 -64876947 + AluJo SINE Alu 1 275 -37 2267 109 0 7 chr18 21801608 21801911 -64875637 + AluSx SINE Alu 3 303 -9 193 311 153 54 chr18 21802189 21802575 -64874973 + L2 LINE L2 2807 3230 -42 1790 179 31 0 chr18 21803422 21803773 -64873775 - L1MB7 LINE L1 -19 6165 5804 535 312 58 10 chr18 21803899 21804194 -64873354 - MER90 LTR ERV1 -18 596 288 297 206 176 0 chr18 21804175 21804277 -64873271 - LTR65 LTR ERV1 -506 163 44 * 998 164 19 47 chr18 21804823 21804841 -64872707 + MER3 DNA MER1_type 2 19 -190 1974 153 0 7 chr18 21804841 21805141 -64872407 - AluSx SINE Alu -8 304 7 998 164 19 47 chr18 21805141 21805336 -64872212 + MER3 DNA MER1_type 19 209 0 209 75 19 75 chr18 21805660 21805713 -64871835 + (TATAA)n Simple_repeat Simple_repeat 3 52 0 402 270 58 7 chr18 21805828 21805965 -64871583 - MIR SINE MIR -109 153 10 288 136 0 0 chr18 21806917 21806961 -64870587 - MER5B DNA MER1_type -9 169 126 4293 121 33 6 chr18 21806968 21807640 -64869908 + L1PA16 LINE L1 5468 6157 -9 2160 130 0 0 chr18 21807709 21808010 -64869538 - AluSx SINE Alu -1 311 11 437 277 21 0 chr18 21808010 21808104 -64869444 - MER5B DNA MER1_type -82 96 1 532 240 162 7 chr18 21808121 21808275 -64869273 + MER5A DNA MER1_type 12 189 0 217 344 0 0 chr18 21809225 21809286 -64868262 + L2 LINE L2 2999 3059 -213 245 282 0 0 chr18 21809307 21809378 -64868170 + CT-rich Low_complexity Low_complexity 2 72 0 1620 161 0 4 chr18 21809758 21810000 -64867548 + AluJb SINE Alu 42 282 -30 2386 86 0 3 chr18 21810061 21810363 -64867185 + AluSx SINE Alu 1 301 -11 24 0 0 0 chr18 21810474 21810498 -64867050 + AT_rich Low_complexity Low_complexity 1 24 0 210 71 0 0 chr18 21810589 21810617 -64866931 + (TTTC)n Simple_repeat Simple_repeat 1 28 0 33 43 0 0 chr18 21812680 21812727 -64864821 + AT_rich Low_complexity Low_complexity 1 47 0 1767 150 57 35 chr18 21813076 21813443 -64864105 + THE1C LTR MaLR 1 375 0 26 30 0 0 chr18 21813632 21813665 -64863883 + AT_rich Low_complexity Low_complexity 1 33 0 191 289 56 11 chr18 21813665 21813755 -64863793 - L2 LINE L2 -952 2362 2269 2142 177 50 23 chr18 21813855 21814034 -64863514 + L1MA6 LINE L1 5763 5936 -364 2152 103 3 32 chr18 21814034 21814345 -64863203 + AluSg SINE Alu 1 302 -8 2142 177 50 23 chr18 21814345 21814680 -64862868 + L1MA6 LINE L1 5936 6291 -9 1199 261 158 27 chr18 21814937 21815386 -64862162 - L2 LINE L2 0 3313 2806 402 285 150 0 chr18 21816513 21816706 -64860842 + MER110 LTR ERV1 255 476 -15 853 187 0 11 chr18 21816810 21816992 -64860556 + L1 LINE L1 4111 4290 -1856 28 0 0 0 chr18 21817332 21817360 -64860188 + AT_rich Low_complexity Low_complexity 1 28 0 28 29 0 0 chr18 21817587 21817622 -64859926 + AT_rich Low_complexity Low_complexity 1 35 0 2474 74 0 10 chr18 21818623 21818935 -64858613 - AluSg SINE Alu -1 309 1 201 273 253 0 chr18 21819029 21819128 -64858420 - MIR SINE MIR -10 252 129 1217 189 40 5 chr18 21819542 21819764 -64857784 - AluJo SINE Alu -82 230 1 191 339 0 18 chr18 21821129 21821185 -64856363 + MIR SINE MIR 21 75 -133 880 147 0 0 chr18 21821368 21821497 -64856051 + AluSg/x SINE Alu 176 304 -8 2191 112 0 22 chr18 21822235 21822549 -64854999 - AluSx SINE Alu -3 309 3 1440 129 4 4 chr18 21825405 21825645 -64851903 - L1M2 LINE L1 -774 5517 5278 2250 83 14 0 chr18 21825645 21825943 -64851605 - AluSg SINE Alu 0 302 1 264 268 103 31 chr18 21825977 21826074 -64851474 + MIR SINE MIR 43 146 -62 5726 129 31 37 chr18 21826119 21826273 -64851275 + L1MA8 LINE L1 4209 4363 -1928 1480 116 40 20 chr18 21826273 21826502 -64851046 - L1PB2 LINE L1 -3 6148 5912 2211 93 0 32 chr18 21826502 21826814 -64850734 + AluY SINE Alu 1 302 -9 1480 116 40 20 chr18 21826814 21826834 -64850714 - L1PB2 LINE L1 -239 5912 5894 5726 129 31 37 chr18 21826834 21827765 -64849783 + L1MA8 LINE L1 4363 5281 -1010 2091 104 4 4 chr18 21827765 21828066 -64849482 + AluSc SINE Alu 1 301 0 5726 129 31 37 chr18 21828066 21828834 -64848714 + L1MA8 LINE L1 5281 6053 -238 2141 89 43 30 chr18 21828834 21829137 -64848411 + AluSx SINE Alu 1 307 -5 253 261 209 0 chr18 21829352 21829505 -64848043 + L2 LINE L2 1898 2082 -1232 965 211 140 47 chr18 21829533 21829625 -64847923 + MLT1F LTR MaLR 1 83 -459 2273 114 0 0 chr18 21829625 21829923 -64847625 + AluSg SINE Alu 1 298 -12 965 211 140 47 chr18 21829923 21830109 -64847439 + MLT1F LTR MaLR 83 305 -237 385 320 90 69 chr18 21830109 21830678 -64846870 + L2 LINE L2 2629 3263 -9 650 217 0 0 chr18 21830680 21830809 -64846739 - FLAM_C SINE Alu -2 131 3 2152 129 0 10 chr18 21831028 21831330 -64846218 + AluSx SINE Alu 1 299 -13 225 0 0 0 chr18 21831720 21831745 -64845803 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 2244 119 0 0 chr18 21831985 21832279 -64845269 - AluSg SINE Alu -16 294 1 2281 118 0 3 chr18 21833033 21833346 -64844202 + AluSx SINE Alu 1 312 0 236 358 95 47 chr18 21833429 21833607 -64843941 - L2 LINE L2 -83 3189 3021 2862 136 119 2 chr18 21833607 21834079 -64843469 - MER1A DNA MER1_type 0 527 1 236 358 95 47 chr18 21834079 21834492 -64843056 - L2 LINE L2 -251 3021 2553 1880 175 0 13 chr18 21834604 21834776 -64842772 - AluJb SINE Alu -7 305 137 2388 89 0 7 chr18 21834776 21835079 -64842469 - AluSx SINE Alu -11 301 1 1880 175 0 13 chr18 21835079 21835215 -64842333 - AluJb SINE Alu -175 137 1 873 71 0 0 chr18 21835327 21835440 -64842108 + AluY SINE Alu 1 113 -198 242 241 0 0 chr18 21836278 21836332 -64841216 + T-rich Low_complexity Low_complexity 1 54 0 23 33 0 0 chr18 21838170 21838200 -64839348 + AT_rich Low_complexity Low_complexity 1 30 0 206 167 0 48 chr18 21838501 21838543 -64839005 + C-rich Low_complexity Low_complexity 5 44 0 26 30 0 0 chr18 21841836 21841869 -64835679 + AT_rich Low_complexity Low_complexity 1 33 0 1746 91 0 9 chr18 21841987 21842217 -64835331 + AluSg/x SINE Alu 83 310 0 406 299 49 37 chr18 21842798 21842962 -64834586 - MIR3 SINE MIR -12 196 31 1079 170 14 33 chr18 21842981 21843036 -64834512 - MER3 DNA MER1_type -1 208 153 1686 167 7 30 chr18 21843036 21843335 -64834213 + AluSx SINE Alu 2 293 -19 1079 170 14 33 chr18 21843335 21843491 -64834057 - MER3 DNA MER1_type -56 153 1 24 32 0 0 chr18 21843703 21843734 -64833814 + AT_rich Low_complexity Low_complexity 1 31 0 2308 85 10 0 chr18 21843744 21844039 -64833509 + AluY SINE Alu 1 298 -13 564 257 133 44 chr18 21844054 21844280 -64833268 - MIR SINE MIR -7 255 10 2147 127 3 3 chr18 21844379 21844687 -64832861 - AluSx SINE Alu -4 308 1 854 97 0 0 chr18 21844828 21844942 -64832606 + AluSq SINE Alu 130 243 -70 822 95 58 7 chr18 21844952 21844986 -64832562 - MER30 DNA MER1_type -86 144 113 195 42 0 0 chr18 21844986 21845010 -64832538 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 822 95 58 7 chr18 21845010 21845112 -64832436 - MER30 DNA MER1_type -117 113 1 273 319 35 12 chr18 21845122 21845291 -64832257 - L1MC4 LINE L1 -546 7496 7324 341 178 52 155 chr18 21845318 21845406 -64832142 - L1MC5 LINE L1 -741 7220 7165 2077 121 14 3 chr18 21845406 21845695 -64831853 - AluSq SINE Alu -21 292 1 341 178 52 155 chr18 21845695 21845819 -64831729 - L1MC5 LINE L1 -796 7165 7030 624 303 32 35 chr18 21846007 21846064 -64831484 - L1MC4a LINE L1 -915 6893 6837 2003 150 0 7 chr18 21846064 21846364 -64831184 - AluJb SINE Alu -14 298 1 624 303 32 35 chr18 21846364 21846590 -64830958 - L1MC4a LINE L1 -971 6837 6611 21 57 0 0 chr18 21846773 21846808 -64830740 + AT_rich Low_complexity Low_complexity 1 35 0 1159 156 6 0 chr18 21846905 21847085 -64830463 - FRAM SINE Alu -4 172 1 2396 84 3 3 chr18 21847113 21847422 -64830126 - AluSg SINE Alu -1 309 1 480 285 56 0 chr18 21847711 21847855 -64829693 + MIR SINE MIR 11 162 -100 339 85 0 0 chr18 21847930 21847977 -64829571 + (CCA)n Simple_repeat Simple_repeat 3 49 0 1989 79 4 26 chr18 21848180 21848446 -64829102 - AluSq SINE Alu -17 296 37 929 146 73 13 chr18 21850123 21850515 -64827033 - LTR54B LTR ERV1 -2 496 14 2167 99 0 0 chr18 21850515 21850818 -64826730 - AluY SINE Alu 0 303 1 803 129 97 0 chr18 21850818 21850942 -64826606 - AluSq/x SINE Alu -176 136 1 279 0 0 0 chr18 21852020 21852051 -64825497 + (TTA)n Simple_repeat Simple_repeat 2 32 0 401 271 10 0 chr18 21852332 21852428 -64825120 + L2 LINE L2 2256 2352 -962 374 276 122 32 chr18 21852425 21852581 -64824967 - L2 LINE L2 -749 2565 2396 * 651 280 18 62 chr18 21852600 21852780 -64824768 + L2 LINE L2 2915 3080 -233 2244 96 10 0 chr18 21852780 21853071 -64824477 - AluSc SINE Alu -15 294 1 651 280 18 62 chr18 21853071 21853165 -64824383 + L2 LINE L2 3080 3177 -136 * 1519 286 99 25 chr18 21853163 21854043 -64823505 + L2 LINE L2 2367 3313 0 823 264 111 43 chr18 21855392 21855880 -64821668 + LTR33 LTR ERVL 1 521 0 192 315 76 0 chr18 21855913 21856005 -64821543 - L2 LINE L2 -10 3303 3205 845 102 38 102 chr18 21857585 21857771 -64819777 + MER20 DNA MER1_type 45 218 -1 629 186 180 0 chr18 21857786 21857958 -64819590 + MER3 DNA MER1_type 6 208 -1 431 143 0 0 chr18 21858108 21858171 -64819377 + AluJ/FLAM SINE Alu 23 85 -227 1442 191 48 9 chr18 21858176 21858491 -64819057 - Charlie1b DNA MER1_type -196 327 1 251 77 0 0 chr18 21859515 21859554 -64817994 - MADE1 DNA Mariner -27 53 15 5401 104 50 18 chr18 21859624 21860317 -64817231 - L1PA13 LINE L1 -2 6161 5492 316 39 20 20 chr18 21860317 21860368 -64817180 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2236 99 0 0 chr18 21860368 21860650 -64816898 - AluSc SINE Alu -27 282 1 5401 104 50 18 chr18 21860650 21860935 -64816613 - L1PA13 LINE L1 -670 5493 5161 53 0 0 0 chr18 21860945 21860998 -64816550 + AT_rich Low_complexity Low_complexity 1 53 0 579 301 59 5 chr18 21861147 21861350 -64816198 - MIR SINE MIR 0 262 49 294 208 0 97 chr18 21862217 21862289 -64815259 + L2 LINE L2 3247 3311 -2 975 229 13 26 chr18 21862439 21862666 -64814882 - MER58A DNA MER1_type 0 224 1 189 0 0 0 chr18 21862875 21862896 -64814652 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1933 159 0 7 chr18 21862899 21863189 -64814359 - AluJb SINE Alu -24 288 1 453 275 57 0 chr18 21863208 21863401 -64814147 + L1ME LINE L1 5599 5802 -319 1232 280 96 5 chr18 21863414 21864001 -64813547 - MER115 DNA AcHobo -3 690 32 260 177 16 0 chr18 21864023 21864085 -64813463 - Alu SINE Alu 0 302 240 2238 92 10 7 chr18 21864558 21864861 -64812687 - AluSx SINE Alu -8 304 1 487 194 136 0 chr18 21864906 21865009 -64812539 + FLAM_A SINE Alu 3 119 -14 191 86 0 29 chr18 21865009 21865044 -64812504 + (CAAT)n Simple_repeat Simple_repeat 2 35 0 1908 147 0 7 chr18 21865117 21865403 -64812145 + AluJb SINE Alu 1 284 -28 317 272 46 87 chr18 21865500 21865629 -64811919 + MIR SINE MIR 25 128 -134 2225 97 27 7 chr18 21865629 21865928 -64811620 + AluSx SINE Alu 2 306 -6 317 272 46 87 chr18 21865928 21866048 -64811500 + MIR SINE MIR 128 251 -11 1505 272 99 16 chr18 21866613 21867106 -64810442 - MLT2E LTR ERVL -94 534 1 21 57 0 0 chr18 21868119 21868154 -64809394 + AT_rich Low_complexity Low_complexity 1 35 0 2412 73 7 10 chr18 21868280 21868582 -64808966 + AluY SINE Alu 1 301 -10 2040 104 0 4 chr18 21868810 21869078 -64808470 + AluSx SINE Alu 1 267 -45 188 35 35 0 chr18 21869086 21869115 -64808433 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 2284 97 0 10 chr18 21869201 21869509 -64808039 + AluSx SINE Alu 1 305 -7 251 282 126 41 chr18 21869579 21870079 -64807469 + L1ME LINE L1 3882 4439 -1707 482 178 0 0 chr18 21870095 21870168 -64807380 + MER20 DNA MER1_type 2 74 -145 642 271 120 14 chr18 21870565 21870801 -64806747 + L1ME LINE L1 4886 5096 -1025 1680 159 20 27 chr18 21870801 21871102 -64806446 + AluJb SINE Alu 1 299 -13 642 271 120 14 chr18 21871102 21871382 -64806166 + L1ME LINE L1 5096 5463 -658 735 181 8 23 chr18 21871416 21871549 -64805999 + FAM SINE Alu 33 163 -22 422 307 21 14 chr18 21871564 21871704 -64805844 + L1ME LINE L1 5467 5607 -2201 1087 140 0 0 chr18 21871705 21871869 -64805679 + L1PB3 LINE L1 5878 6041 -113 21 0 0 0 chr18 21871991 21872012 -64805536 + AT_rich Low_complexity Low_complexity 1 21 0 2361 86 3 0 chr18 21872328 21872631 -64804917 + AluY SINE Alu 1 304 -7 1852 171 7 3 chr18 21873331 21873641 -64803907 + AluJb SINE Alu 1 311 -1 250 277 36 0 chr18 21873856 21873939 -64803609 + L1ME LINE L1 5741 5826 -295 607 224 178 28 chr18 21874099 21874313 -64803235 - MLT1J LTR MaLR -7 504 259 378 379 61 0 chr18 21875065 21875326 -64802222 + L2 LINE L2 2400 2676 -638 2322 57 0 11 chr18 21875531 21875812 -64801736 - AluY SINE Alu -33 278 1 187 284 149 0 chr18 21876054 21876121 -64801427 + L2 LINE L2 3150 3226 -46 262 208 0 56 chr18 21876434 21876506 -64801042 + MER4-int LTR ERV1 1095 1162 -5436 472 222 80 49 chr18 21876643 21876805 -64800743 - MIR SINE MIR -73 189 23 1919 160 0 7 chr18 21876839 21877145 -64800403 + AluSx SINE Alu 1 304 -8 2041 155 0 0 chr18 21880277 21880573 -64796975 - AluSx SINE Alu -16 296 1 1844 148 0 0 chr18 21880816 21881086 -64796462 + AluSx SINE Alu 1 270 -42 192 40 0 0 chr18 21881096 21881121 -64796427 + (TA)n Simple_repeat Simple_repeat 2 26 0 2330 103 7 0 chr18 21881404 21881704 -64795844 + AluSq SINE Alu 1 302 -11 1715 195 0 13 chr18 21881711 21882009 -64795539 + AluJo SINE Alu 3 296 -16 1692 98 0 41 chr18 21882551 21882796 -64794752 + AluSc SINE Alu 59 293 -16 2521 75 0 0 chr18 21883664 21883972 -64793576 - AluY SINE Alu -3 308 1 241 300 92 42 chr18 21885569 21885689 -64791859 - MIR SINE MIR -5 203 77 2469 67 0 3 chr18 21885716 21886014 -64791534 + AluY SINE Alu 3 299 -12 359 294 31 69 chr18 21886177 21886337 -64791211 + MER5A DNA MER1_type 36 189 0 2385 78 7 0 chr18 21886916 21887211 -64790337 + AluSx SINE Alu 1 297 -15 350 321 158 3 chr18 21887507 21887730 -64789818 + MIR SINE MIR 6 257 -5 2411 88 0 10 chr18 21888145 21888452 -64789096 + AluY SINE Alu 1 304 -7 296 340 58 19 chr18 21888906 21889062 -64788486 - MIR3 SINE MIR -3 205 44 1693 142 6 116 chr18 21889147 21889491 -64788057 - AluSp SINE Alu -7 306 1 2166 96 0 0 chr18 21889536 21889853 -64787695 + AluY SINE Alu 1 317 0 237 361 68 5 chr18 21890246 21890451 -64787097 + L2 LINE L2 1153 1370 -1944 365 333 43 31 chr18 21890478 21890736 -64786812 + L2 LINE L2 2175 2435 -879 693 250 14 68 chr18 21890841 21891007 -64786541 + MIR SINE MIR 6 159 -103 2312 104 3 0 chr18 21891007 21891306 -64786242 + AluSx SINE Alu 1 300 -12 693 250 14 68 chr18 21891306 21891359 -64786189 + MIR SINE MIR 159 213 -49 289 250 143 0 chr18 21891400 21891484 -64786064 + L2 LINE L2 3177 3272 0 295 355 91 30 chr18 21891543 21891839 -64785709 + L2 LINE L2 2439 2752 -562 537 269 121 0 chr18 21892047 21892229 -64785319 - MLT1J LTR MaLR 0 511 308 1708 101 0 4 chr18 21892494 21892722 -64784826 + AluSg/x SINE Alu 81 307 -3 825 128 14 22 chr18 21893318 21893529 -64784019 + AluSx SINE Alu 2 285 -24 1332 115 0 0 chr18 21893560 21893742 -64783806 + AluSq SINE Alu 110 291 -22 587 183 96 0 chr18 21893743 21893847 -64783701 - AluJo/FLAM SINE Alu -195 117 4 2035 121 47 3 chr18 21894200 21894498 -64783050 - AluSx SINE Alu -1 311 1 894 173 0 37 chr18 21894695 21894857 -64782691 - FRAM SINE Alu -20 156 1 2230 92 10 0 chr18 21895032 21895326 -64782222 - AluSp SINE Alu -14 299 3 305 275 17 33 chr18 21896172 21896292 -64781256 - MER117 DNA MER1_type -78 119 2 327 336 42 65 chr18 21896373 21896587 -64780961 + MIR SINE MIR 19 227 -35 680 167 180 50 chr18 21896588 21896642 -64780906 - Charlie1b DNA MER1_type -2238 523 477 2236 73 0 77 chr18 21896642 21896785 -64780763 + AluSg SINE Alu 1 107 -203 2354 67 0 0 chr18 21896785 21897070 -64780478 + AluY SINE Alu 2 286 -25 2236 73 0 77 chr18 21897070 21897253 -64780295 + AluSg SINE Alu 107 302 -8 680 167 180 50 chr18 21897253 21897420 -64780128 - Charlie1b DNA MER1_type -2284 477 273 661 190 8 0 chr18 21897422 21897543 -64780005 - Charlie1b DNA MER1_type -320 203 82 473 307 148 25 chr18 21897553 21897836 -64779712 + MLT1L LTR MaLR 196 513 -102 1996 123 13 30 chr18 21897886 21898187 -64779361 + AluSx SINE Alu 1 296 -16 2127 109 13 10 chr18 21898299 21898603 -64778945 - AluSg SINE Alu -1 309 5 2324 87 0 13 chr18 21899526 21899835 -64777713 - AluSg SINE Alu -5 305 1 248 288 75 41 chr18 21900368 21900514 -64777034 - MIR SINE MIR -65 197 47 27 49 0 0 chr18 21900700 21900741 -64776807 + AT_rich Low_complexity Low_complexity 1 41 0 2251 93 3 0 chr18 21902118 21902409 -64775139 - AluSg1 SINE Alu -17 292 1 1451 85 0 11 chr18 21902438 21902626 -64774922 - AluY SINE Alu -125 186 1 4036 149 88 46 chr18 21904063 21904355 -64773193 - L1MC3 LINE L1 -6 7779 7501 1741 52 0 14 chr18 21904355 21904568 -64772980 - AluY SINE Alu -4 307 98 4036 149 88 46 chr18 21904568 21905162 -64772386 - L1MC3 LINE L1 -284 7501 6856 7283 117 58 28 chr18 21905809 21906350 -64771198 + Tigger3b DNA MER2_type 1 525 -2503 2421 88 0 0 chr18 21906350 21906656 -64770892 - AluSc SINE Alu -3 306 1 7283 117 58 28 chr18 21906656 21907310 -64770238 + Tigger3b DNA MER2_type 525 1231 0 316 363 27 20 chr18 21907333 21907479 -64770069 + MIR3 SINE MIR 14 160 -48 2186 106 0 0 chr18 21907620 21907931 -64769617 - AluSq SINE Alu 0 311 1 272 289 72 0 chr18 21907998 21908095 -64769453 + MIR SINE MIR 153 256 -6 41 21 0 0 chr18 21908564 21908612 -64768936 + AT_rich Low_complexity Low_complexity 1 48 0 1738 167 4 4 chr18 21908612 21908893 -64768655 - AluJb SINE Alu -31 281 1 1982 133 7 10 chr18 21909119 21909285 -64768263 - AluSx SINE Alu -13 299 133 1289 136 185 8 chr18 21909285 21909550 -64767998 - AluJb SINE Alu 0 312 1 1982 133 7 10 chr18 21909550 21909683 -64767865 - AluSx SINE Alu -179 133 1 353 216 14 0 chr18 21909705 21909779 -64767769 - MLT1K LTR MaLR -4 584 510 262 320 21 10 chr18 21909982 21910079 -64767469 - MLT1K LTR MaLR -339 249 152 184 327 127 0 chr18 21910240 21910350 -64767198 + L2 LINE L2 3190 3313 0 2191 88 0 39 chr18 21910648 21910955 -64766593 + AluSg SINE Alu 14 308 -2 2126 125 0 0 chr18 21911541 21911830 -64765718 - AluSg SINE Alu -2 308 20 2528 89 0 0 chr18 21911853 21912166 -64765382 - AluSq SINE Alu 0 313 1 21 36 0 0 chr18 21912243 21912271 -64765277 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr18 21912633 21912660 -64764888 + AT_rich Low_complexity Low_complexity 1 27 0 2263 51 6 100 chr18 21913034 21913365 -64764183 + AluY SINE Alu 1 300 -11 1200 75 37 0 chr18 21913375 21913536 -64764012 + AluY SINE Alu 131 297 -14 313 283 50 42 chr18 21913644 21913764 -64763784 - L2 LINE L2 -5 3308 3188 542 325 43 17 chr18 21914003 21914237 -64763311 + MIR SINE MIR 20 259 -3 459 237 0 11 chr18 21915132 21915225 -64762323 + L2 LINE L2 3190 3281 -32 834 62 0 0 chr18 21915239 21915352 -64762196 + (TGGA)n Simple_repeat Simple_repeat 1 113 0 459 222 0 30 chr18 21915546 21915645 -64761903 + L2 LINE L2 3173 3268 -4 293 280 114 46 chr18 21916741 21916916 -64760632 - L1ME LINE L1 -351 5770 5584 489 158 0 48 chr18 21918198 21918344 -64759204 + CT-rich Low_complexity Low_complexity 1 139 0 1655 174 48 3 chr18 21918350 21918644 -64758904 - AluJb SINE Alu -5 307 1 196 175 32 0 chr18 21918719 21918782 -64758766 + (TA)n Simple_repeat Simple_repeat 2 66 0 2050 153 0 0 chr18 21921340 21921635 -64755913 + AluSx SINE Alu 1 295 -17 958 130 0 27 chr18 21921669 21921815 -64755733 + AluJb SINE Alu 3 144 -168 533 156 0 0 chr18 21921818 21921908 -64755640 + Alu SINE Alu 218 307 -3 2267 111 3 0 chr18 21922688 21922995 -64754553 - AluSx SINE Alu -4 308 1 901 252 87 0 chr18 21923171 21923413 -64754135 - L1ME LINE L1 -1062 5084 4822 234 207 0 0 chr18 21923411 21923469 -64754079 + L1MB7 LINE L1 5125 5182 -964 * 4191 193 29 22 chr18 21923498 21923558 -64753990 + L1MB7 LINE L1 5125 5183 -1001 3286 129 23 13 chr18 21923558 21924083 -64753465 + L1MA4 LINE L1 5765 6294 -6 4191 193 29 22 chr18 21924083 21924334 -64753214 + L1MB7 LINE L1 5183 5431 -753 2351 100 3 0 chr18 21924334 21924635 -64752913 + AluSp SINE Alu 1 302 -11 4191 193 29 22 chr18 21924635 21925368 -64752180 + L1MB7 LINE L1 5431 6171 -13 296 319 82 50 chr18 21925491 21925673 -64751875 + MIR SINE MIR 8 195 -67 612 197 36 0 chr18 21926059 21926196 -64751352 + ORSL DNA AcHobo 1 142 -133 1703 158 8 0 chr18 21926196 21926461 -64751087 + AluSx SINE Alu 1 267 -45 446 211 51 13 chr18 21926488 21926644 -64750904 + L1ME3A LINE L1 5122 5283 -863 934 129 0 0 chr18 21926668 21926807 -64750741 + FRAM SINE Alu 38 176 0 793 268 55 72 chr18 21926963 21927001 -64750547 + L1ME3A LINE L1 5759 5796 -374 1743 164 0 48 chr18 21927001 21927312 -64750236 + AluJb SINE Alu 1 296 -16 793 268 55 72 chr18 21927312 21927583 -64749965 + L1ME3A LINE L1 5796 6062 -108 207 0 0 0 chr18 21927583 21927606 -64749942 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 793 268 55 72 chr18 21927606 21927713 -64749835 + L1ME3A LINE L1 6062 6169 -1 539 265 23 23 chr18 21928453 21928585 -64748963 + L2 LINE L2 3141 3272 0 573 283 106 21 chr18 21928820 21929157 -64748391 + L1MC4a LINE L1 5508 5756 -365 1476 254 45 33 chr18 21929671 21930097 -64747451 + L1ME1 LINE L1 37 467 -5929 1477 181 59 4 chr18 21930119 21930389 -64747159 + AluJo SINE Alu 1 285 -27 260 206 29 20 chr18 21930390 21930492 -64747056 + GA-rich Low_complexity Low_complexity 1 103 0 3871 249 90 38 chr18 21930493 21931351 -64746197 + L1ME1 LINE L1 468 1280 -5116 1987 65 0 8 chr18 21931351 21931596 -64745952 + AluY SINE Alu 56 298 -13 3871 249 90 38 chr18 21931596 21931629 -64745919 + L1ME1 LINE L1 1280 1310 -5086 1951 123 25 4 chr18 21931629 21931939 -64745609 + AluSx SINE Alu 1 316 0 3871 249 90 38 chr18 21931939 21932125 -64745423 + L1ME1 LINE L1 1310 1485 -4911 1933 129 37 10 chr18 21932125 21932419 -64745129 + AluSx SINE Alu 1 302 -10 3871 249 90 38 chr18 21932419 21932595 -64744953 + L1ME1 LINE L1 1485 1650 -4746 2246 84 37 7 chr18 21932595 21932894 -64744654 + AluY SINE Alu 1 308 -3 3871 249 90 38 chr18 21932894 21933084 -64744464 + L1ME1 LINE L1 1650 1990 -4406 1147 176 15 0 chr18 21933136 21933340 -64744208 + MER2 DNA MER2_type 1 207 -138 2083 104 6 41 chr18 21933370 21933709 -64743839 - AluSq SINE Alu 0 313 1 1926 135 22 86 chr18 21933782 21934153 -64743395 + MER7A DNA MER2_type 1 345 -1 543 269 12 18 chr18 21934153 21934313 -64743235 + L1M4 LINE L1 4191 4351 -1795 1583 138 53 3 chr18 21934336 21934619 -64742929 - AluSx SINE Alu -11 301 5 358 286 16 16 chr18 21934734 21934860 -64742688 + L1ME1 LINE L1 4295 4420 -1795 * 2925 207 91 39 chr18 21934840 21934883 -64742665 + L1ME1 LINE L1 4883 4922 -1313 2029 133 14 0 chr18 21934883 21935176 -64742372 - AluSx SINE Alu -11 301 5 2925 207 91 39 chr18 21935176 21935525 -64742023 + L1ME1 LINE L1 4922 5251 -984 2325 89 0 10 chr18 21935525 21935829 -64741719 + AluSg SINE Alu 4 304 -6 2925 207 91 39 chr18 21935829 21936718 -64740830 + L1ME1 LINE L1 5251 6230 -5 320 318 39 28 chr18 21936727 21936906 -64740642 + L3 LINE CR1 844 1024 -553 226 283 0 19 chr18 21937055 21937108 -64740440 - L2 LINE L2 -8 3264 3213 214 235 20 0 chr18 21937763 21937814 -64739734 + (TA)n Simple_repeat Simple_repeat 2 53 0 1378 275 149 17 chr18 21937866 21938371 -64739177 - L1MC4a LINE L1 -1785 6023 5415 2215 108 3 0 chr18 21938371 21938659 -64738889 - AluSg SINE Alu -21 289 1 1378 275 149 17 chr18 21938659 21938792 -64738756 - L1MC4a LINE L1 -2393 5415 5301 411 282 163 77 chr18 21938792 21939009 -64738539 - LTR16C LTR ERVL 0 491 229 1844 150 14 7 chr18 21939009 21939302 -64738246 + AluJo SINE Alu 1 295 -17 411 282 163 77 chr18 21939302 21939446 -64738102 - LTR16C LTR ERVL -262 229 99 2183 120 0 3 chr18 21939717 21940008 -64737540 + AluSx SINE Alu 1 290 -22 229 139 0 0 chr18 21940010 21940046 -64737502 + Alu SINE Alu 258 293 -7 2075 147 22 78 chr18 21940051 21940460 -64737088 - L1MB8 LINE L1 -9 6169 5784 655 157 54 48 chr18 21940506 21940672 -64736876 - L1MB8 LINE L1 -809 5337 5171 5152 227 31 75 chr18 21940718 21941487 -64736061 - L1M4 LINE L1 -418 5766 4965 2303 87 0 7 chr18 21941487 21941786 -64735762 - AluSg SINE Alu -13 297 1 5152 227 31 75 chr18 21941786 21942108 -64735440 - L1M4 LINE L1 -1219 4965 4631 2539 65 0 3 chr18 21942108 21942417 -64735131 + AluY SINE Alu 3 310 -1 5152 227 31 75 chr18 21942417 21942651 -64734897 - L1M4 LINE L1 -1553 4631 4388 1942 171 0 3 chr18 21942651 21942956 -64734592 + AluJo SINE Alu 1 304 -8 5152 227 31 75 chr18 21942956 21943339 -64734209 - L1M4 LINE L1 -1796 4388 4203 2927 13 0 0 chr18 21943339 21943657 -64733891 + AluYb8 SINE Alu 1 318 0 5152 227 31 75 chr18 21943657 21944055 -64733493 - L1M4 LINE L1 -1981 4203 3789 439 137 0 14 chr18 21944066 21944139 -64733409 - AluSp/q SINE Alu -18 295 224 2314 104 0 3 chr18 21944141 21944448 -64733100 - AluSq SINE Alu -7 306 1 295 260 0 0 chr18 21944448 21944521 -64733027 - L1M4 LINE L1 -2360 3786 3714 433 73 0 0 chr18 21944535 21944590 -64732958 + (TTCC)n Simple_repeat Simple_repeat 1 55 0 915 129 6 12 chr18 21944590 21944761 -64732787 + (TCTCC)n Simple_repeat Simple_repeat 5 174 0 4211 211 40 64 chr18 21944762 21944773 -64732775 - L1M4 LINE L1 -2451 3695 3685 1063 201 0 0 chr18 21944773 21944937 -64732611 - FRAM SINE Alu -2 164 1 4211 211 40 64 chr18 21944937 21945265 -64732283 - L1M4 LINE L1 -2461 3685 3351 2122 177 8 37 chr18 21945265 21945667 -64731881 - MLT1B LTR MaLR 0 390 1 4211 211 40 64 chr18 21945667 21946012 -64731536 - L1M4 LINE L1 -2795 3351 2999 2551 64 3 6 chr18 21946012 21946326 -64731222 - AluSp SINE Alu 0 313 1 4211 211 40 64 chr18 21946326 21946416 -64731132 - L1M4 LINE L1 -3147 2999 2908 2051 125 0 11 chr18 21946416 21946755 -64730793 - AluSx SINE Alu 0 336 1 4211 211 40 64 chr18 21946755 21947341 -64730207 - L1M4 LINE L1 -3238 2908 2364 2454 87 0 3 chr18 21947341 21947653 -64729895 - AluY SINE Alu 0 311 1 4211 211 40 64 chr18 21947653 21947734 -64729814 - L1M4 LINE L1 -3782 2364 2283 440 303 71 20 chr18 21947734 21947988 -64729560 - L1MB8 LINE L1 -977 5169 4903 27 0 0 0 chr18 21948093 21948120 -64729428 + AT_rich Low_complexity Low_complexity 1 27 0 2488 90 0 0 chr18 21948127 21948437 -64729111 - AluSx SINE Alu -2 310 1 339 236 132 28 chr18 21948442 21948586 -64728962 - L1MC5 LINE L1 -54 7907 7749 21 57 0 0 chr18 21949460 21949495 -64728053 + AT_rich Low_complexity Low_complexity 1 35 0 2074 124 0 3 chr18 21949623 21949913 -64727635 + AluSx SINE Alu 1 289 -23 471 217 0 0 chr18 21949916 21950022 -64727526 + (TATATG)n Simple_repeat Simple_repeat 1 106 0 342 280 28 19 chr18 21950095 21950202 -64727346 + MIR SINE MIR 150 257 -5 355 348 120 60 chr18 21950743 21951076 -64726472 - L2 LINE L2 -5 3267 2915 897 319 130 14 chr18 21951242 21951759 -64725789 - L2 LINE L2 -579 2735 2159 1713 178 14 0 chr18 21951788 21952069 -64725479 + AluJb SINE Alu 3 287 -25 432 0 0 0 chr18 21952100 21952148 -64725400 + (TG)n Simple_repeat Simple_repeat 2 49 0 1837 178 0 0 chr18 21952148 21952441 -64725107 - AluJb SINE Alu -19 293 1 816 175 0 0 chr18 21952538 21952658 -64724890 - AluJb SINE Alu -191 121 2 1168 223 90 60 chr18 21952866 21953353 -64724195 + L1MC5 LINE L1 7244 7656 -305 256 224 30 0 chr18 21953375 21953442 -64724106 + L1MC5 LINE L1 7810 7878 -83 1697 168 39 11 chr18 21953442 21953727 -64723821 + AluJb SINE Alu 14 306 -6 794 162 40 165 chr18 21953732 21953813 -64723735 + L1MC5 LINE L1 7649 7739 -222 1831 163 7 14 chr18 21953813 21954107 -64723441 + AluJo SINE Alu 1 292 -20 2620 54 0 10 chr18 21954107 21954420 -64723128 + AluY SINE Alu 1 310 -1 794 162 40 165 chr18 21954420 21954640 -64722908 + L1MC5 LINE L1 7737 7913 -48 272 276 98 65 chr18 21955348 21955471 -64722077 + MIR SINE MIR 80 206 -56 305 263 0 20 chr18 21956574 21956673 -64720875 + L1ME4a LINE L1 5960 6056 -65 199 200 263 38 chr18 21957107 21957187 -64720361 - L2 LINE L2 -33 3239 3142 305 265 98 15 chr18 21957310 21957442 -64720106 - L2 LINE L2 -183 3089 2947 209 0 97 0 chr18 21958265 21958296 -64719252 + GA-rich Low_complexity Low_complexity 2 35 0 2015 129 23 7 chr18 21958333 21958635 -64718913 - AluSx SINE Alu -5 307 1 1919 91 40 54 chr18 21958639 21958937 -64718611 - AluSx SINE Alu -18 294 1 998 201 118 53 chr18 21959116 21959439 -64718109 + MER2 DNA MER2_type 1 344 0 215 173 19 0 chr18 21960034 21960086 -64717462 + CT-rich Low_complexity Low_complexity 3 55 0 2490 83 3 0 chr18 21960664 21960976 -64716572 + AluSp SINE Alu 1 313 0 2138 103 7 0 chr18 21961477 21961794 -64715754 - AluSx SINE Alu 0 319 1 182 65 65 0 chr18 21961907 21961938 -64715610 + A-rich Low_complexity Low_complexity 2 34 0 233 29 29 0 chr18 21962114 21962148 -64715400 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1020 147 0 29 chr18 21962611 21962781 -64714767 + FRAM SINE Alu 2 166 -10 2081 116 14 0 chr18 21963353 21963645 -64713903 + AluSx SINE Alu 1 296 -16 22 80 0 0 chr18 21965999 21966049 -64711499 + AT_rich Low_complexity Low_complexity 1 50 0 298 236 39 31 chr18 21966326 21966453 -64711095 - L1ME LINE L1 -301 5820 5693 304 258 22 22 chr18 21966818 21966907 -64710641 + MIR SINE MIR 49 137 -71 297 135 0 0 chr18 21966898 21966950 -64710598 + (TTCC)n Simple_repeat Simple_repeat 1 52 0 * 1820 139 22 38 chr18 21966950 21967267 -64710281 - AluJo SINE Alu 0 312 1 222 37 0 0 chr18 21970791 21970818 -64706730 + (CA)n Simple_repeat Simple_repeat 2 28 0 2176 112 20 3 chr18 21970871 21971175 -64706373 + AluSx SINE Alu 1 309 -3 400 213 189 98 chr18 21971265 21971368 -64706180 - MER5A DNA MER1_type -2 187 62 2262 123 0 7 chr18 21971368 21971677 -64705871 - AluSx SINE Alu -5 307 1 400 213 189 98 chr18 21971677 21971737 -64705811 - MER5A DNA MER1_type -127 62 9 1298 101 0 16 chr18 21971763 21971952 -64705596 + L1MA2 LINE L1 6119 6304 0 250 211 0 99 chr18 21972928 21972999 -64704549 - L1ME4a LINE L1 -69 6052 5989 238 300 11 33 chr18 21973047 21973137 -64704411 - L1ME4a LINE L1 -233 5888 5801 186 326 121 30 chr18 21973305 21973437 -64704111 - MIR3 SINE MIR -6 202 59 2438 78 0 7 chr18 21973439 21973745 -64703803 - AluSp SINE Alu -9 304 1 2405 89 0 9 chr18 21974745 21975061 -64702487 - AluSq SINE Alu 0 313 1 30 27 0 0 chr18 21975121 21975158 -64702390 + AT_rich Low_complexity Low_complexity 1 37 0 183 234 72 72 chr18 21975370 21975537 -64702011 + L2 LINE L2 702 868 -2446 1288 124 0 0 chr18 21975615 21975816 -64701732 - AluSp SINE Alu 0 334 134 1462 107 29 0 chr18 21975816 21976021 -64701527 - AluSq SINE Alu -9 304 94 202 216 0 0 chr18 21976514 21976551 -64700997 + GA-rich Low_complexity Low_complexity 2 38 0 1990 116 10 33 chr18 21976711 21977014 -64700534 - AluSx SINE Alu -16 296 1 2449 80 0 0 chr18 21977640 21977942 -64699606 + AluY SINE Alu 1 302 -9 2054 135 0 0 chr18 21979028 21979317 -64698231 - AluSx SINE Alu -23 289 1 2070 148 0 0 chr18 21979532 21979829 -64697719 + AluJb SINE Alu 1 297 -15 1559 190 24 14 chr18 21979880 21980175 -64697373 - AluJo SINE Alu -14 298 1 2156 130 0 0 chr18 21980203 21980496 -64697052 + AluSx SINE Alu 1 293 -19 1969 135 44 0 chr18 21980872 21981169 -64696379 + AluSx SINE Alu 1 310 -2 366 23 0 0 chr18 21981565 21981571 -64695977 + (TG)n Simple_repeat Simple_repeat 1 49 0 366 23 0 0 chr18 21981571 21981614 -64695934 + (TG)n Simple_repeat Simple_repeat 2 44 0 1870 208 128 4 chr18 21981675 21982151 -64695397 - L1ME3A LINE L1 -52 6118 5584 2308 105 0 3 chr18 21982388 21982694 -64694854 - AluSx SINE Alu -7 305 1 207 0 0 0 chr18 21982778 21982801 -64694747 + (T)n Simple_repeat Simple_repeat 1 23 0 2186 125 3 0 chr18 21983830 21984135 -64693413 + AluSq SINE Alu 1 306 -7 2502 64 0 0 chr18 21985361 21985659 -64691889 + AluY SINE Alu 1 298 -13 220 330 0 0 chr18 21986905 21986973 -64690575 + MIR SINE MIR 55 122 -86 2317 82 0 33 chr18 21987007 21987311 -64690237 + AluSx SINE Alu 1 294 -18 2224 100 31 0 chr18 21987311 21987602 -64689946 + AluSx SINE Alu 1 300 -12 2381 109 0 0 chr18 21987933 21988245 -64689303 - AluSx SINE Alu 0 312 1 25 0 0 0 chr18 21988252 21988277 -64689271 + AT_rich Low_complexity Low_complexity 1 25 0 620 169 188 0 chr18 21988895 21989049 -64688499 - MER5A DNA MER1_type 0 189 7 316 194 65 0 chr18 21990609 21990671 -64686877 + MIR3 SINE MIR 105 170 -38 2440 73 0 13 chr18 21990716 21991016 -64686532 + AluY SINE Alu 1 296 -15 2596 68 0 0 chr18 21991353 21991663 -64685885 + AluY SINE Alu 1 310 -1 190 157 20 78 chr18 21991907 21991958 -64685590 + MER5B DNA MER1_type 5 52 -126 1111 113 0 12 chr18 21992100 21992260 -64685288 + FRAM SINE Alu 8 165 -11 2357 107 3 0 chr18 21992873 21993182 -64684366 + AluSx SINE Alu 1 310 -2 379 96 21 0 chr18 21993855 21993920 -64683628 + Alu SINE Alu 239 293 -7 634 294 113 17 chr18 21995427 21995658 -64681890 - MIR SINE MIR 0 262 10 189 0 0 0 chr18 21996393 21996414 -64681134 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 238 197 14 14 chr18 21996600 21996654 -64680894 - L1ME4a LINE L1 -2 6119 6063 2289 92 16 19 chr18 21996654 21996968 -64680580 + AluSq SINE Alu 1 313 0 238 197 14 14 chr18 21996968 21996984 -64680564 - L1ME4a LINE L1 -57 6064 6049 545 273 138 53 chr18 21998323 21998396 -64679152 + L1MC4a LINE L1 5959 6024 -1784 2248 125 0 0 chr18 21998396 21998707 -64678841 - AluSx SINE Alu -1 311 1 545 273 138 53 chr18 21998707 21999092 -64678456 + L1MC4a LINE L1 6024 6470 -1338 2577 65 0 0 chr18 21999092 21999401 -64678147 - AluY SINE Alu -1 310 2 545 273 138 53 chr18 21999401 21999469 -64678079 + L1MC4a LINE L1 6470 6531 -1277 1244 171 40 0 chr18 21999554 21999753 -64677795 - AluJb SINE Alu -31 281 75 2686 232 65 77 chr18 21999834 22000205 -64677343 + L1MC4 LINE L1 6875 7249 -793 2190 85 0 51 chr18 22000205 22000521 -64677027 + AluSc SINE Alu 1 300 -9 2686 232 65 77 chr18 22000521 22000931 -64676617 + L1MC4 LINE L1 7249 7640 -402 1589 134 50 14 chr18 22000931 22001214 -64676334 - L1MA8 LINE L1 0 6291 5999 2686 232 65 77 chr18 22001214 22001597 -64675951 + L1MC4 LINE L1 7640 8026 -16 491 287 40 44 chr18 22001941 22002213 -64675335 - L1ME4a LINE L1 -198 5972 5702 459 241 46 0 chr18 22002230 22002338 -64675210 - L1ME4a LINE L1 -523 5641 5529 312 125 36 0 chr18 22002381 22002437 -64675111 - L1MC4 LINE L1 0 8042 7985 * 4382 199 37 21 chr18 22002435 22003700 -64673848 + L1MB8 LINE L1 4353 5660 -518 2359 87 0 3 chr18 22003700 22003999 -64673549 + AluY SINE Alu 1 298 -13 4382 199 37 21 chr18 22003999 22004527 -64673021 + L1MB8 LINE L1 5660 6178 0 * 4446 211 107 34 chr18 22004522 22005803 -64671745 - L1MC4a LINE L1 -40 7768 6394 1440 184 4 15 chr18 22005973 22006245 -64671303 + AluJo SINE Alu 14 282 -30 21 0 0 0 chr18 22006245 22006266 -64671282 + AT_rich Low_complexity Low_complexity 1 21 0 470 254 193 14 chr18 22006270 22006628 -64670920 - L1ME4a LINE L1 -1542 4604 4183 352 235 128 13 chr18 22006706 22006855 -64670693 + L1ME4a LINE L1 5956 6121 0 227 133 44 22 chr18 22007299 22007344 -64670204 - MIR SINE MIR -116 146 101 401 222 89 59 chr18 22007423 22007558 -64669990 + L2 LINE L2 3175 3313 0 2034 149 10 0 chr18 22007569 22007878 -64669670 - AluSx SINE Alu 0 312 1 2327 113 3 0 chr18 22009245 22009554 -64667994 + AluSx SINE Alu 1 310 -2 2157 123 25 55 chr18 22009689 22010054 -64667494 - THE1A LTR MaLR 0 355 2 2211 65 4 0 chr18 22010055 22010331 -64667217 - THE1A-int LTR MaLR 0 1580 1304 * 3200 100 34 40 chr18 22010325 22010823 -64666725 - THE1A-int LTR MaLR -564 1016 522 1186 112 39 11 chr18 22010824 22011002 -64666546 - THE1B LTR MaLR -181 183 1 207 341 0 11 chr18 22011133 22011221 -64666327 + CT-rich Low_complexity Low_complexity 1 87 0 2180 102 3 0 chr18 22011330 22011613 -64665935 - AluSg1 SINE Alu -25 284 1 2301 103 0 13 chr18 22011642 22011954 -64665594 + AluSx SINE Alu 1 308 -4 366 23 0 0 chr18 22012537 22012543 -64665005 + (TG)n Simple_repeat Simple_repeat 1 49 0 366 23 0 0 chr18 22012543 22012586 -64664962 + (TG)n Simple_repeat Simple_repeat 2 44 0 1870 208 128 4 chr18 22012647 22013123 -64664425 - L1ME3A LINE L1 -52 6118 5584 2308 105 0 3 chr18 22013360 22013666 -64663882 - AluSx SINE Alu -7 305 1 207 0 0 0 chr18 22013750 22013773 -64663775 + (T)n Simple_repeat Simple_repeat 1 23 0 2212 114 13 0 chr18 22014802 22015101 -64662447 + AluSx SINE Alu 1 303 -9 1605 101 9 0 chr18 22015287 22015504 -64662044 - AluSg/x SINE Alu -16 294 76 277 100 0 0 chr18 22015506 22015546 -64662002 - Alu SINE Alu -263 40 1 2299 93 0 19 chr18 22015641 22015953 -64661595 + AluSq SINE Alu 1 306 -7 2493 64 0 0 chr18 22017179 22017476 -64660072 + AluY SINE Alu 1 297 -14 202 330 0 0 chr18 22018722 22018790 -64658758 + MIR SINE MIR 55 122 -86 1876 145 0 0 chr18 22018824 22019113 -64658435 + AluSx SINE Alu 1 289 -23 2418 87 0 0 chr18 22019569 22019868 -64657680 - AluSx SINE Alu -13 299 1 361 279 33 22 chr18 22020981 22021164 -64656384 - LTR33 LTR ERVL -11 510 326 306 117 50 17 chr18 22021251 22021311 -64656237 - LTR33 LTR ERVL -358 163 102 2221 139 7 0 chr18 22022533 22022843 -64654705 + AluSx SINE Alu 1 312 0 2457 54 90 6 chr18 22022995 22023330 -64654218 - L1PA8 LINE L1 -5 6167 5805 2289 82 34 0 chr18 22023730 22024024 -64653524 + AluSx SINE Alu 6 309 -3 34 19 0 19 chr18 22024938 22024971 -64652577 + AT_rich Low_complexity Low_complexity 1 34 -17 2098 110 18 0 chr18 22024971 22025252 -64652296 - AluSx SINE Alu -26 286 1 34 19 0 19 chr18 22025252 22025270 -64652278 + AT_rich Low_complexity Low_complexity 34 51 0 2169 119 0 3 chr18 22025309 22025624 -64651924 - AluSx SINE Alu 0 314 1 1866 145 62 0 chr18 22025679 22025969 -64651579 - AluSx SINE Alu -3 309 2 1642 197 7 7 chr18 22025999 22026298 -64651250 + AluJo SINE Alu 1 299 -13 1297 184 32 0 chr18 22026299 22026516 -64651032 + AluJo SINE Alu 1 224 -88 208 244 49 12 chr18 22026545 22026612 -64650936 - MIR SINE MIR -153 109 40 552 235 35 29 chr18 22026612 22026782 -64650766 - MER5B DNA MER1_type -3 175 5 2335 85 3 3 chr18 22027860 22028155 -64649393 + AluSx SINE Alu 1 295 -17 4924 188 76 24 chr18 22031627 22031672 -64645876 - L1MB2 LINE L1 -2 6169 6128 2146 105 7 23 chr18 22031672 22031978 -64645570 + AluSq SINE Alu 1 301 -12 4924 188 76 24 chr18 22031978 22032840 -64644708 - L1MB2 LINE L1 -43 6128 5313 2132 105 39 0 chr18 22032840 22033125 -64644423 + AluSp SINE Alu 1 296 -17 4924 188 76 24 chr18 22033125 22033401 -64644147 - L1MB2 LINE L1 -858 5313 5053 1786 165 14 14 chr18 22033401 22033692 -64643856 - AluJo SINE Alu -21 291 1 4924 188 76 24 chr18 22033692 22034573 -64642975 - L1MB2 LINE L1 -1118 5053 3988 740 270 150 0 chr18 22034763 22034989 -64642559 - MIR SINE MIR -1 261 2 2191 128 7 0 chr18 22035982 22036279 -64641269 + AluSx SINE Alu 1 299 -13 197 125 31 0 chr18 22036326 22036358 -64641190 + MIR SINE MIR 38 70 -138 689 100 108 50 chr18 22036359 22036479 -64641069 - FLAM_C SINE Alu -10 133 7 197 299 15 0 chr18 22036493 22036560 -64640988 + MIR SINE MIR 75 142 -66 2172 98 27 14 chr18 22038625 22038921 -64638627 - AluSx SINE Alu -12 300 1 889 113 0 0 chr18 22039106 22039230 -64638318 - AluSg/x SINE Alu -12 298 175 180 159 0 68 chr18 22040254 22040298 -64637250 + L2 LINE L2 3016 3056 -216 225 205 55 118 chr18 22040677 22040804 -64636744 - L1ME4a LINE L1 -123 5998 5880 201 233 0 0 chr18 22040876 22040919 -64636629 - MIR3 SINE MIR -8 200 158 1711 167 24 7 chr18 22040928 22041222 -64636326 + AluJb SINE Alu 1 299 -13 590 268 38 0 chr18 22041392 22041549 -64635999 - MIR SINE MIR -64 198 36 1980 117 0 63 chr18 22041671 22041988 -64635560 - AluSq SINE Alu -16 297 1 2361 77 6 13 chr18 22042661 22042973 -64634575 + AluY SINE Alu 1 310 -1 1272 70 25 0 chr18 22042975 22043133 -64634415 + AluSp SINE Alu 136 297 -16 249 108 0 0 chr18 22043273 22043310 -64634238 + (TTTA)n Simple_repeat Simple_repeat 1 37 0 600 129 124 148 chr18 22043338 22043469 -64634079 + MER20 DNA MER1_type 22 148 -71 2121 122 3 3 chr18 22043469 22043764 -64633784 + AluSx SINE Alu 1 295 -17 600 129 124 148 chr18 22043764 22043834 -64633714 + MER20 DNA MER1_type 148 218 -1 2240 99 3 13 chr18 22043938 22044240 -64633308 + AluSc SINE Alu 1 299 -10 346 259 267 43 chr18 22048788 22049271 -64628277 + L2 LINE L2 1858 2448 -866 327 226 85 19 chr18 22049473 22049579 -64627969 + MIR SINE MIR 148 260 -2 22 0 0 0 chr18 22049843 22049865 -64627683 + AT_rich Low_complexity Low_complexity 1 22 0 2148 114 0 17 chr18 22049950 22050248 -64627300 + AluSx SINE Alu 1 293 -19 290 314 57 16 chr18 22050498 22050622 -64626926 - L2 LINE L2 -6 3266 3138 1745 132 129 6 chr18 22050821 22051154 -64626394 + L1M4 LINE L1 5449 5822 -362 1955 94 0 0 chr18 22051159 22051403 -64626145 + AluSc SINE Alu 1 244 -65 1048 157 30 0 chr18 22051421 22051619 -64625929 + L1PA14 LINE L1 5954 6157 -4 291 282 39 90 chr18 22051915 22052149 -64625399 - MLT1K LTR MaLR -2 586 365 2099 115 3 23 chr18 22052506 22052811 -64624737 - AluSc SINE Alu -10 299 1 658 179 0 37 chr18 22052823 22052957 -64624591 - FLAM_A SINE Alu 0 142 14 772 189 21 7 chr18 22053065 22053208 -64624340 + FRAM SINE Alu 1 145 -31 195 100 0 0 chr18 22053208 22053238 -64624310 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 263 294 54 0 chr18 22053530 22053622 -64623926 + MER5A DNA MER1_type 9 105 -84 2093 129 0 3 chr18 22053642 22053957 -64623591 + AluSq SINE Alu 1 314 0 2258 81 0 78 chr18 22054059 22054394 -64623154 - AluSc SINE Alu 0 309 1 237 284 105 86 chr18 22054463 22054612 -64622936 - L2 LINE L2 -1105 2209 2051 1707 160 3 26 chr18 22054612 22054919 -64622629 + AluJb SINE Alu 1 300 -12 237 284 105 86 chr18 22054919 22055026 -64622522 - L2 LINE L2 -1263 2051 1948 2331 39 36 4 chr18 22055042 22055316 -64622232 + AluY SINE Alu 2 285 -22 294 29 0 0 chr18 22055316 22055351 -64622197 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1168 127 0 0 chr18 22055361 22055526 -64622022 + AluSg/x SINE Alu 130 294 -16 2486 75 0 0 chr18 22055622 22055927 -64621621 - AluSc SINE Alu -4 305 1 2150 69 0 7 chr18 22056099 22056376 -64621172 - AluSq SINE Alu -5 308 34 786 134 0 22 chr18 22057137 22057271 -64620277 - FLAM_C SINE Alu -2 131 1 213 302 151 0 chr18 22057660 22057766 -64619782 - L2 LINE L2 -15 3257 3136 2468 76 0 0 chr18 22057843 22058146 -64619402 + AluSg SINE Alu 1 303 -7 2101 111 21 0 chr18 22058258 22058546 -64619002 + AluSx SINE Alu 1 294 -18 216 331 22 59 chr18 22058816 22058952 -64618596 + L2 LINE L2 2397 2527 -787 1790 248 81 36 chr18 22059237 22059601 -64617947 - L1ME2 LINE L1 -10 6154 5808 2439 87 0 7 chr18 22059601 22059911 -64617637 + AluSx SINE Alu 1 308 -4 1790 248 81 36 chr18 22059911 22060241 -64617307 - L1ME2 LINE L1 -356 5808 5429 2525 69 0 0 chr18 22060247 22060552 -64616996 - AluY SINE Alu -6 305 1 348 238 129 0 chr18 22060554 22060655 -64616893 - L1ME2 LINE L1 -857 5289 5176 2155 90 8 0 chr18 22060657 22060923 -64616625 - AluSq SINE Alu -45 268 1 2170 105 3 10 chr18 22060957 22061251 -64616297 - AluSc SINE Alu -17 292 1 661 203 51 6 chr18 22061279 22061437 -64616111 - L1ME2 LINE L1 -1141 5005 4841 1250 93 0 55 chr18 22061438 22061620 -64615928 + AluSq SINE Alu 1 172 -141 1727 126 91 23 chr18 22061986 22062249 -64615299 + AluSx SINE Alu 1 281 -31 956 142 0 68 chr18 22062406 22062568 -64614980 + AluJo SINE Alu 1 151 -161 2122 123 7 7 chr18 22063444 22063746 -64613802 - AluSx SINE Alu -9 303 2 2189 96 16 16 chr18 22063768 22064071 -64613477 + AluSx SINE Alu 1 303 -9 1497 167 3 52 chr18 22064071 22064217 -64613331 - AluJo SINE Alu -32 280 153 2229 112 0 7 chr18 22064217 22064520 -64613028 - AluSg1 SINE Alu -8 301 1 1497 167 3 52 chr18 22064520 22064661 -64612887 - AluJo SINE Alu -159 153 7 226 207 168 98 chr18 22065047 22065148 -64612400 + L1MC/D LINE L1 5288 5381 -2427 2362 74 0 17 chr18 22065148 22065444 -64612104 + AluY SINE Alu 1 291 -20 226 207 168 98 chr18 22065444 22065545 -64612003 + L1MC/D LINE L1 5381 5504 -2304 301 228 87 0 chr18 22065559 22065651 -64611897 + L1MC/D LINE L1 5710 5809 -1999 1007 164 0 18 chr18 22065663 22065834 -64611714 - AluSg/x SINE Alu -11 299 132 2213 105 6 19 chr18 22065834 22066147 -64611401 - AluSx SINE Alu -3 309 1 2451 69 3 7 chr18 22066400 22066706 -64610842 - AluY SINE Alu -6 305 1 1101 140 12 0 chr18 22067196 22067360 -64610188 - AluSg/x SINE Alu -13 297 132 1701 109 0 29 chr18 22067361 22067600 -64609948 - AluSg SINE Alu -21 289 58 2348 76 14 0 chr18 22068367 22068655 -64608893 + AluSg SINE Alu 3 294 -16 2159 119 3 0 chr18 22068676 22068969 -64608579 + AluSx SINE Alu 1 294 -18 1492 176 64 17 chr18 22069064 22069360 -64608188 + MER2 DNA MER2_type 36 345 0 2239 117 3 0 chr18 22069583 22069882 -64607666 - AluSq SINE Alu -13 300 1 2284 73 3 0 chr18 22069888 22070175 -64607373 - AluY SINE Alu -23 288 1 2035 148 3 7 chr18 22070377 22070687 -64606861 + AluSx SINE Alu 1 309 -3 2124 119 10 0 chr18 22070775 22071068 -64606480 + AluSg SINE Alu 1 296 -14 594 212 14 34 chr18 22071068 22071214 -64606334 - FRAM SINE Alu -8 168 26 23 78 0 0 chr18 22071214 22071265 -64606283 + AT_rich Low_complexity Low_complexity 1 51 0 1543 76 100 5 chr18 22071273 22071483 -64606065 + AluSq SINE Alu 1 230 -83 329 196 0 0 chr18 22071500 22071551 -64605997 - FRAM/FAM SINE Alu -89 77 27 668 222 25 0 chr18 22071562 22071724 -64605824 - L1MB8 LINE L1 -12 6166 6001 237 301 7 49 chr18 22072080 22072223 -64605325 + AluSp/q SINE Alu 163 299 -4 674 121 98 61 chr18 22072311 22072443 -64605105 - FLAM_C SINE Alu 0 143 7 714 189 8 0 chr18 22072619 22072751 -64604797 + AluJo/FLAM SINE Alu 1 133 -169 319 89 67 0 chr18 22072754 22072799 -64604749 - AluSc SINE Alu -33 266 219 1394 112 0 5 chr18 22072799 22072986 -64604562 - AluSg SINE Alu -124 186 1 243 0 0 0 chr18 22072987 22073014 -64604534 + (T)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr18 22073032 22073055 -64604493 + GC_rich Low_complexity Low_complexity 1 23 0 1109 104 0 30 chr18 22073210 22073374 -64604174 - AluSg/x SINE Alu 0 310 152 207 0 0 0 chr18 22073383 22073406 -64604142 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1275 226 65 19 chr18 22073447 22073815 -64603733 - L1MD3 LINE L1 0 7995 7611 289 358 34 25 chr18 22073821 22073885 -64603663 + L3 LINE CR1 1287 1349 -228 1756 174 27 0 chr18 22073885 22074178 -64603370 + AluJo SINE Alu 1 301 -11 289 358 34 25 chr18 22074178 22074317 -64603231 + L3 LINE CR1 1349 1492 -85 265 233 0 0 chr18 22074853 22074913 -64602635 + GA-rich Low_complexity Low_complexity 6 65 0 2360 155 37 0 chr18 22075184 22075565 -64601983 - MER57A LTR ERV1 -1 402 8 2211 108 0 0 chr18 22076269 22076556 -64600992 + AluSg SINE Alu 3 289 -21 275 209 14 14 chr18 22076567 22076715 -64600833 + (TA)n Simple_repeat Simple_repeat 2 149 0 1619 101 0 9 chr18 22076916 22077133 -64600415 - AluSg/x SINE Alu -11 299 85 2276 69 30 13 chr18 22077215 22077520 -64600028 - AluY SINE Alu -1 310 1 422 286 45 0 chr18 22077541 22077653 -64599895 - LTR33 LTR ERVL -315 206 90 608 225 69 19 chr18 22077751 22077911 -64599637 + AluJo SINE Alu 118 285 -27 2160 116 14 0 chr18 22077968 22078260 -64599288 + AluSx SINE Alu 3 298 -14 2569 74 0 0 chr18 22078628 22078937 -64598611 - AluY SINE Alu -2 309 1 2178 132 7 0 chr18 22079308 22079618 -64597930 - AluSx SINE Alu 0 312 1 2500 68 0 0 chr18 22079648 22079941 -64597607 - AluY SINE Alu -18 293 1 1365 160 87 42 chr18 22080177 22080489 -64597059 + MER82 DNA MER2_type 65 390 -263 343 295 23 8 chr18 22080636 22080765 -64596783 - MIR3 SINE MIR -7 201 71 201 74 0 0 chr18 22081030 22081057 -64596491 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 1995 125 26 35 chr18 22081069 22081255 -64596293 - AluSg SINE Alu 0 310 127 2514 74 0 0 chr18 22081255 22081553 -64595995 - AluY SINE Alu -13 298 1 1995 125 26 35 chr18 22081553 22081679 -64595869 - AluSg SINE Alu -183 127 1 2279 52 22 0 chr18 22082403 22082674 -64594874 + AluY SINE Alu 26 302 -9 2181 121 0 10 chr18 22082804 22083110 -64594438 + AluSq SINE Alu 1 303 -10 2427 58 24 3 chr18 22083111 22083403 -64594145 + AluY SINE Alu 5 302 -9 373 45 0 0 chr18 22083551 22083595 -64593953 + MSTB1 LTR MaLR 1 44 -388 2046 132 7 10 chr18 22083595 22083905 -64593643 - AluSx SINE Alu -3 309 1 1502 212 45 48 chr18 22083951 22084375 -64593173 - MLT2B1 LTR ERVL 0 414 1 2107 139 0 3 chr18 22084449 22084744 -64592804 - AluSg SINE Alu -16 294 1 2241 114 0 3 chr18 22085146 22085452 -64592096 - AluSq SINE Alu -8 305 1 1735 173 25 3 chr18 22086027 22086311 -64591237 - AluJo SINE Alu -22 290 1 337 185 0 147 chr18 22086355 22086412 -64591136 - L1MC5 LINE L1 -527 7434 7370 2619 61 0 6 chr18 22086412 22086725 -64590823 - AluY SINE Alu 0 311 1 337 185 0 147 chr18 22086725 22086824 -64590724 - L1MC5 LINE L1 -591 7370 7301 2420 79 3 0 chr18 22086997 22087300 -64590248 - AluSp SINE Alu -9 304 1 708 238 113 21 chr18 22087312 22087552 -64589996 + MIR SINE MIR 1 262 0 735 198 15 104 chr18 22087576 22087653 -64589895 - AluJo SINE Alu -15 297 215 1650 158 0 31 chr18 22087653 22087973 -64589575 + AluJb SINE Alu 1 311 0 735 198 15 104 chr18 22087973 22088094 -64589454 - AluJo SINE Alu -97 215 114 439 141 0 14 chr18 22088172 22088243 -64589305 + MLT1A1 LTR MaLR 1 70 -295 947 127 0 8 chr18 22088243 22088377 -64589171 + FLAM_C SINE Alu 1 133 -10 785 202 39 0 chr18 22088437 22088615 -64588933 + L1MB8 LINE L1 5982 6166 -12 568 240 0 0 chr18 22088626 22088730 -64588818 + FAM SINE Alu 27 130 -55 1409 99 28 14 chr18 22088735 22088947 -64588601 + AluSg/x SINE Alu 93 307 -3 411 159 58 0 chr18 22088991 22089060 -64588488 + MLT1A1 LTR MaLR 80 152 -213 407 205 12 0 chr18 22089078 22089161 -64588387 + MLT1A1 LTR MaLR 282 365 0 2348 143 57 2 chr18 22089422 22089828 -64587720 - MSTC LTR MaLR 0 428 1 213 39 0 0 chr18 22089855 22089881 -64587667 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1325 82 0 0 chr18 22089999 22090158 -64587390 - AluSg SINE Alu -151 159 1 495 321 57 5 chr18 22090190 22090383 -64587165 - MIR SINE MIR -45 217 15 2143 117 0 0 chr18 22090805 22091086 -64586462 - AluSx SINE Alu -31 281 1 2071 138 7 0 chr18 22091396 22091694 -64585854 + AluSx SINE Alu 1 300 -12 341 319 7 7 chr18 22092041 22092179 -64585369 - L2 LINE L2 -10 3303 3166 315 98 0 0 chr18 22092245 22092286 -64585262 - MER112 DNA MER1_type -6 254 214 180 0 0 0 chr18 22092312 22092332 -64585216 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1978 110 4 15 chr18 22092332 22092605 -64584943 - AluSx SINE Alu -34 278 9 2105 135 3 0 chr18 22093025 22093321 -64584227 + AluSx SINE Alu 7 303 -9 232 293 71 40 chr18 22093468 22093567 -64583981 + MIR SINE MIR 45 146 -62 222 162 0 0 chr18 22093592 22093629 -64583919 + L2 LINE L2 3220 3256 -16 22 35 0 0 chr18 22093816 22093845 -64583703 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr18 22094000 22094033 -64583515 + AT_rich Low_complexity Low_complexity 1 33 0 2170 93 54 0 chr18 22094168 22094448 -64583100 + AluSg SINE Alu 1 295 -15 352 263 187 5 chr18 22094678 22094836 -64582712 - LTR50 LTR ERVL -183 612 484 3700 185 50 7 chr18 22094836 22095537 -64582011 - MER44D DNA MER2_type -2 603 1 352 263 187 5 chr18 22095537 22095575 -64581973 - LTR50 LTR ERVL -311 484 288 585 154 129 22 chr18 22095607 22095766 -64581782 - LTR50 LTR ERVL -587 208 26 2285 125 0 3 chr18 22095805 22096117 -64581431 + AluSq SINE Alu 1 311 -2 448 205 212 20 chr18 22096117 22096268 -64581280 + Charlie7 DNA MER1_type 2164 2343 -269 2127 130 7 0 chr18 22096296 22096603 -64580945 + AluSq SINE Alu 1 309 -4 40 83 0 0 chr18 22096910 22096958 -64580590 + AT_rich Low_complexity Low_complexity 1 48 0 367 292 73 6 chr18 22097077 22097255 -64580293 - L1ME LINE L1 -566 5600 5411 23 0 0 0 chr18 22097777 22097800 -64579748 + AT_rich Low_complexity Low_complexity 1 23 0 428 184 83 101 chr18 22097913 22098081 -64579467 + HAL1 LINE L1 1496 1660 -847 199 89 0 67 chr18 22098086 22098131 -64579417 + (GAAA)n Simple_repeat Simple_repeat 4 45 0 21 0 0 0 chr18 22098224 22098245 -64579303 + AT_rich Low_complexity Low_complexity 1 21 0 1733 141 74 7 chr18 22098250 22098534 -64579014 + AluSx SINE Alu 1 303 -9 1870 174 0 16 chr18 22098580 22098897 -64578651 - AluJb SINE Alu 0 312 1 2140 92 0 83 chr18 22099048 22099185 -64578363 + AluSx SINE Alu 1 148 -164 2397 94 0 0 chr18 22099185 22099493 -64578055 + AluY SINE Alu 1 308 -3 2140 92 0 83 chr18 22099493 22099682 -64577866 + AluSx SINE Alu 148 300 -12 2215 120 0 3 chr18 22099870 22100170 -64577378 + AluSp SINE Alu 1 299 -14 422 292 73 26 chr18 22100340 22100573 -64576975 + L1MC4a LINE L1 5669 5912 -1896 1799 164 10 29 chr18 22100770 22101081 -64576467 + AluJo SINE Alu 1 305 -7 1650 189 17 7 chr18 22101081 22101378 -64576170 + AluJb SINE Alu 1 300 -12 180 176 0 0 chr18 22101382 22101416 -64576132 + GA-rich Low_complexity Low_complexity 3 36 0 2030 151 3 6 chr18 22101632 22101944 -64575604 - AluSx SINE Alu -1 311 1 2284 73 3 0 chr18 22102146 22102433 -64575115 + AluY SINE Alu 1 288 -23 2201 121 3 0 chr18 22102439 22102737 -64574811 + AluSq SINE Alu 1 299 -14 1492 176 64 17 chr18 22102961 22103257 -64574291 - MER2 DNA MER2_type 0 345 36 2159 119 3 0 chr18 22103352 22103645 -64573903 - AluSx SINE Alu -18 294 1 1776 151 21 3 chr18 22103666 22103957 -64573591 - AluSx SINE Alu -16 296 1 605 249 98 25 chr18 22104629 22104830 -64572718 + MLT1F LTR MaLR 54 265 -290 754 240 44 10 chr18 22105017 22105221 -64572327 + L1PB1 LINE L1 6 216 -6647 * 9646 106 52 12 chr18 22105198 22106628 -64570920 + L1PB1 LINE L1 1392 2887 -3976 2330 75 0 3 chr18 22106628 22106920 -64570628 + AluY SINE Alu 1 291 -20 9646 106 52 12 chr18 22106920 22107009 -64570539 + L1PB1 LINE L1 2887 2971 -3892 6488 128 13 4 chr18 22107012 22108455 -64569093 + L1PB1 LINE L1 5406 6864 -3 642 224 106 32 chr18 22108503 22108749 -64568799 + MLT1F LTR MaLR 278 541 -1 1287 190 56 21 chr18 22108837 22108977 -64568571 + AluJo SINE Alu 1 135 -177 2200 91 45 0 chr18 22108977 22109263 -64568285 + AluSp SINE Alu 1 299 -14 1287 190 56 21 chr18 22109263 22109406 -64568142 + AluJo SINE Alu 135 294 -18 23 0 0 0 chr18 22109432 22109455 -64568093 + AT_rich Low_complexity Low_complexity 1 23 0 1939 126 0 40 chr18 22109514 22109815 -64567733 - AluSg SINE Alu -21 289 1 1039 232 129 68 chr18 22110080 22110723 -64566825 + L1MC5 LINE L1 6972 7653 -308 1770 152 0 52 chr18 22110725 22111034 -64566514 + AluJo SINE Alu 1 293 -19 253 189 126 45 chr18 22111042 22111153 -64566395 + L1MC5 LINE L1 7791 7910 -51 2361 119 0 0 chr18 22111227 22111539 -64566009 - AluSx SINE Alu 0 312 1 3219 167 123 126 chr18 22111811 22112126 -64565422 - L1MC3 LINE L1 -1 7784 7470 2301 94 0 3 chr18 22112126 22112412 -64565136 - AluSg SINE Alu -25 285 1 3219 167 123 126 chr18 22112412 22112425 -64565123 - L1MC3 LINE L1 -315 7470 7458 2195 110 13 0 chr18 22112425 22112724 -64564824 - AluSq SINE Alu -7 306 4 3219 167 123 126 chr18 22112724 22112995 -64564553 - L1MC3 LINE L1 -327 7458 7188 366 158 12 73 chr18 22112995 22113077 -64564471 - MLT1F1 LTR MaLR -456 111 35 3219 167 123 126 chr18 22113077 22113579 -64563969 - L1MC3 LINE L1 -597 7188 6603 2386 83 0 0 chr18 22113582 22113872 -64563676 - AluSg SINE Alu -20 290 1 253 104 42 21 chr18 22114067 22114115 -64563433 - HY3 scRNA scRNA -1 100 52 1070 152 9 43 chr18 22115785 22115995 -64561553 - AluSc SINE Alu 0 309 107 465 127 0 51 chr18 22116029 22116108 -64561440 - FLAM_C SINE Alu -36 107 33 5179 91 3 14 chr18 22116109 22116869 -64560679 - L1P3 LINE L1 -2328 4133 3383 2506 84 0 0 chr18 22116869 22117209 -64560339 - AluY SINE Alu 0 340 1 13130 101 14 29 chr18 22117209 22120647 -64556901 - L1P3 LINE L1 -3061 3400 3 356 198 11 55 chr18 22120647 22120738 -64556810 + L1ME1 LINE L1 5580 5666 -500 1108 101 24 6 chr18 22120738 22120906 -64556642 + HSMAR2 DNA Mariner 1 171 -1131 2202 130 0 0 chr18 22120906 22121213 -64556335 + AluSx SINE Alu 1 307 -5 353 115 0 16 chr18 22121213 22121274 -64556274 + (GA)n Simple_repeat Simple_repeat 1 60 0 1807 118 15 70 chr18 22121277 22121330 -64556218 + HSMAR2 DNA Mariner 159 213 -1089 2413 77 3 0 chr18 22121330 22121629 -64555919 + AluY SINE Alu 1 300 -11 1807 118 15 70 chr18 22121629 22121776 -64555772 + HSMAR2 DNA Mariner 213 337 -965 1901 118 15 0 chr18 22121776 22122039 -64555509 + AluSp SINE Alu 44 310 -3 1807 118 15 70 chr18 22122039 22122167 -64555381 + HSMAR2 DNA Mariner 337 470 -832 1043 202 0 52 chr18 22122167 22122415 -64555133 + AluJo SINE Alu 1 235 -77 3803 130 42 15 chr18 22122428 22123029 -64554519 + HSMAR2 DNA Mariner 465 1081 -221 1485 172 4 26 chr18 22123057 22123325 -64554223 + AluJo SINE Alu 21 282 -30 387 0 0 0 chr18 22123341 22123384 -64554164 + (TG)n Simple_repeat Simple_repeat 2 44 0 2021 139 0 7 chr18 22123402 22123689 -64553859 - AluSx SINE Alu -24 288 4 1409 125 5 5 chr18 22123713 22123937 -64553611 + HSMAR2 DNA Mariner 1076 1299 -3 1083 205 4 25 chr18 22123937 22123977 -64553571 + L1ME1 LINE L1 5666 5705 -461 2583 55 3 0 chr18 22123977 22124284 -64553264 - AluY SINE Alu -3 308 1 1083 205 4 25 chr18 22124284 22124487 -64553061 + L1ME1 LINE L1 5705 5904 -262 343 374 54 51 chr18 22124490 22125083 -64552465 - L2 LINE L2 -61 3211 2569 189 204 56 74 chr18 22125084 22125138 -64552410 - L2 LINE L2 -865 2449 2397 2199 107 0 3 chr18 22125161 22125451 -64552097 - AluSx SINE Alu -23 289 1 262 128 0 0 chr18 22125761 22125800 -64551748 - MLT1A2 LTR MaLR -72 302 264 1737 141 55 102 chr18 22125806 22125947 -64551601 + MLT1A1 LTR MaLR 1 147 -218 2060 132 0 0 chr18 22125947 22126234 -64551314 + AluSx SINE Alu 1 287 -25 1737 141 55 102 chr18 22126234 22126474 -64551074 + MLT1A1 LTR MaLR 147 364 -1 293 277 184 41 chr18 22126475 22126818 -64550730 + MLT1J LTR MaLR 42 433 -78 1565 125 0 4 chr18 22126827 22127075 -64550473 + L1MA5 LINE L1 6052 6298 -2 2292 104 0 0 chr18 22127227 22127526 -64550022 - AluSq SINE Alu -14 299 1 1247 206 66 8 chr18 22127655 22127972 -64549576 - MLT1E1 LTR MaLR -2 652 259 1453 172 33 69 chr18 22127973 22128276 -64549272 - AluJo SINE Alu -20 292 1 1897 120 6 79 chr18 22128304 22128621 -64548927 + AluSx SINE Alu 1 294 -18 297 280 30 20 chr18 22129066 22129166 -64548382 - MIR SINE MIR -151 111 11 953 108 0 23 chr18 22129336 22129466 -64548082 - FLAM_C SINE Alu -16 127 1 751 218 6 29 chr18 22129468 22129638 -64547910 - FRAM SINE Alu -10 166 1 459 92 0 0 chr18 22129923 22129988 -64547560 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 2524 65 0 10 chr18 22130620 22130926 -64546622 - AluY SINE Alu -8 303 1 450 0 0 0 chr18 22130963 22131013 -64546535 + (TA)n Simple_repeat Simple_repeat 2 51 0 2183 115 0 26 chr18 22131013 22131318 -64546230 - AluSx SINE Alu -15 297 1 738 64 0 83 chr18 22131513 22131622 -64545926 - HY3 scRNA scRNA -1 100 1 770 137 65 0 chr18 22131737 22131861 -64545687 + FLAM_C SINE Alu 1 132 -1 3336 168 116 127 chr18 22131870 22131927 -64545621 + L1MC3 LINE L1 6552 6608 -1177 2382 83 0 0 chr18 22131927 22132217 -64545331 + AluSg SINE Alu 1 290 -20 3336 168 116 127 chr18 22132217 22132722 -64544826 + L1MC3 LINE L1 6608 7117 -668 366 158 12 73 chr18 22132722 22132804 -64544744 + MLT1F1 LTR MaLR 35 111 -456 3336 168 116 127 chr18 22132804 22133075 -64544473 + L1MC3 LINE L1 7117 7389 -396 2195 110 13 0 chr18 22133075 22133374 -64544174 + AluSq SINE Alu 4 306 -7 3336 168 116 127 chr18 22133374 22133387 -64544161 + L1MC3 LINE L1 7389 7401 -384 2301 94 0 3 chr18 22133387 22133673 -64543875 + AluSg SINE Alu 1 285 -25 3336 168 116 127 chr18 22133673 22133988 -64543560 + L1MC3 LINE L1 7401 7784 -1 2396 115 0 0 chr18 22134260 22134572 -64542976 + AluSx SINE Alu 1 312 0 253 189 126 45 chr18 22134646 22134757 -64542791 - L1MC5 LINE L1 -51 7910 7791 1770 152 0 52 chr18 22134765 22135074 -64542474 - AluJo SINE Alu -19 293 1 1039 232 129 68 chr18 22135076 22135719 -64541829 - L1MC5 LINE L1 -308 7653 6972 1939 126 0 40 chr18 22135984 22136285 -64541263 + AluSg SINE Alu 1 289 -21 23 0 0 0 chr18 22136344 22136367 -64541181 + AT_rich Low_complexity Low_complexity 1 23 0 1287 190 56 21 chr18 22136393 22136536 -64541012 - AluJo SINE Alu -18 294 157 2200 91 45 0 chr18 22136536 22136822 -64540726 - AluSp SINE Alu -14 299 1 1287 190 56 21 chr18 22136822 22136962 -64540586 - AluJo SINE Alu -155 157 1 642 224 106 32 chr18 22137050 22137296 -64540252 - MLT1F LTR MaLR -1 541 278 6488 128 13 4 chr18 22137344 22138787 -64538761 - L1PB1 LINE L1 -3 6864 5406 9646 106 52 12 chr18 22138790 22138879 -64538669 - L1PB1 LINE L1 -3892 2971 2887 2330 75 0 3 chr18 22138879 22139171 -64538377 - AluY SINE Alu -20 291 1 9646 106 52 12 chr18 22139171 22140601 -64536947 - L1PB1 LINE L1 -3976 2887 1392 754 240 44 10 chr18 22140578 22140782 -64536766 - L1PB1 LINE L1 -6647 216 6 * 605 249 98 25 chr18 22140969 22141170 -64536378 - MLT1F LTR MaLR -290 265 54 1118 170 0 74 chr18 22141842 22142071 -64535477 + AluSx SINE Alu 1 212 -100 2388 88 0 10 chr18 22142103 22142411 -64535137 - AluSg SINE Alu -5 305 1 29 0 0 0 chr18 22142419 22142448 -64535100 + AT_rich Low_complexity Low_complexity 1 29 0 1593 171 0 47 chr18 22142476 22142774 -64534774 + AluJo SINE Alu 5 288 -24 24 0 0 0 chr18 22142774 22142798 -64534750 + AT_rich Low_complexity Low_complexity 1 24 0 2314 207 74 39 chr18 22142886 22143457 -64534091 - MLT1E LTR MaLR -2 591 1 1949 154 7 0 chr18 22143747 22144052 -64533496 + AluJo SINE Alu 1 307 -5 2132 141 3 6 chr18 22144158 22144471 -64533077 + AluSx SINE Alu 1 312 0 2316 94 17 0 chr18 22144614 22144913 -64532635 + AluSx SINE Alu 1 304 -8 1934 166 0 0 chr18 22144988 22145271 -64532277 - AluJo SINE Alu -27 285 3 1786 117 103 4 chr18 22145347 22145620 -64531928 + AluSx SINE Alu 1 300 -12 204 308 181 15 chr18 22145834 22145967 -64531581 + L2 LINE L2 2920 3074 -198 1105 252 58 89 chr18 22145996 22146404 -64531144 + LTR67 LTR ERVL 2 390 -167 2415 63 7 7 chr18 22146404 22146706 -64530842 - AluY SINE Alu -9 302 1 1105 252 58 89 chr18 22146706 22146861 -64530687 + LTR67 LTR ERVL 390 548 -9 199 254 16 16 chr18 22147001 22147064 -64530484 + MIR SINE MIR 91 153 -109 1963 124 7 20 chr18 22147071 22147369 -64530179 - AluSx SINE Alu -18 294 1 290 296 11 0 chr18 22147412 22147500 -64530048 - MIR3 SINE MIR -29 179 91 1157 201 123 48 chr18 22147587 22147920 -64529628 + MLT1A2 LTR MaLR 13 370 -4 236 125 0 0 chr18 22147959 22147991 -64529557 + AluSq SINE Alu 1 32 -276 1513 126 0 5 chr18 22147993 22148216 -64529332 - pTR5 LTR ERV1 -2046 392 171 262 278 11 0 chr18 22148218 22148308 -64529240 - LTR30 LTR ERV1 -80 642 552 4911 132 216 34 chr18 22148309 22149400 -64528148 - pTR5 LTR ERV1 -406 2032 743 1813 94 45 0 chr18 22149400 22149672 -64527876 + AluSq SINE Alu 31 313 0 1636 66 28 5 chr18 22151554 22151767 -64525781 + AluSq SINE Alu 1 218 -95 1755 164 40 3 chr18 22154237 22154536 -64523012 + AluJb SINE Alu 1 310 -2 524 169 0 0 chr18 22154766 22154855 -64522693 - AluJ/FRAM SINE Alu -8 304 216 198 0 0 0 chr18 22154891 22154913 -64522635 + (T)n Simple_repeat Simple_repeat 1 22 0 2380 105 0 3 chr18 22155041 22155355 -64522193 + AluSq SINE Alu 1 313 0 2322 69 7 7 chr18 22155357 22155646 -64521902 + AluSp SINE Alu 1 289 -24 451 235 8 68 chr18 22155646 22155778 -64521770 - MER5B DNA MER1_type -54 124 1 984 126 0 0 chr18 22157014 22157141 -64520407 + FLAM_C SINE Alu 1 127 -16 2021 152 3 0 chr18 22157922 22158218 -64519330 - AluSx SINE Alu -15 297 1 1342 291 59 4 chr18 22158633 22159090 -64518458 + LTR16C LTR ERVL 1 482 -9 944 190 101 45 chr18 22159739 22160007 -64517541 - AluJo SINE Alu -16 286 4 362 262 131 0 chr18 22160329 22160451 -64517097 + MIR3 SINE MIR 65 202 -6 2170 121 3 3 chr18 22160720 22161033 -64516515 - AluSq SINE Alu 0 313 1 21 0 0 0 chr18 22161039 22161060 -64516488 + AT_rich Low_complexity Low_complexity 1 21 0 199 89 0 67 chr18 22161153 22161198 -64516350 + (TTTC)n Simple_repeat Simple_repeat 4 45 0 428 184 83 101 chr18 22161203 22161371 -64516177 - HAL1 LINE L1 -847 1660 1496 23 0 0 0 chr18 22161484 22161507 -64516041 + AT_rich Low_complexity Low_complexity 1 23 0 367 300 63 22 chr18 22162029 22162332 -64515216 + L1ME LINE L1 5411 5717 -453 2127 130 7 0 chr18 22162652 22162959 -64514589 - AluSq SINE Alu -4 309 1 448 205 212 20 chr18 22162987 22163138 -64514410 - Charlie7 DNA MER1_type -269 2343 2164 2285 125 0 3 chr18 22163138 22163450 -64514098 - AluSq SINE Alu -2 311 1 585 154 129 22 chr18 22163489 22163648 -64513900 + LTR50 LTR ERVL 26 208 -587 352 263 187 5 chr18 22163680 22163718 -64513830 + LTR50 LTR ERVL 288 318 -477 3700 185 50 7 chr18 22163718 22164419 -64513129 + MER44D DNA MER2_type 1 603 -2 352 263 187 5 chr18 22164419 22164577 -64512971 + LTR50 LTR ERVL 318 612 -183 2170 93 54 0 chr18 22164807 22165087 -64512461 - AluSg SINE Alu -15 295 1 26 30 0 0 chr18 22165222 22165255 -64512293 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr18 22165410 22165439 -64512109 + AT_rich Low_complexity Low_complexity 1 29 0 222 162 0 0 chr18 22165626 22165663 -64511885 - L2 LINE L2 -16 3256 3220 232 293 71 40 chr18 22165688 22165787 -64511761 - MIR SINE MIR -62 146 45 2105 135 3 0 chr18 22165934 22166230 -64511318 - AluSx SINE Alu -9 303 7 434 241 22 29 chr18 22167054 22167191 -64510357 + AluY SINE Alu 143 278 -33 1470 140 9 9 chr18 22167279 22167508 -64510040 + AluSg/x SINE Alu 75 303 -9 967 142 0 68 chr18 22168384 22168546 -64509002 - AluJo SINE Alu -161 151 1 1727 126 91 23 chr18 22168703 22168966 -64508582 - AluSx SINE Alu -31 281 1 1250 93 0 55 chr18 22169332 22169514 -64508034 - AluSq SINE Alu -141 172 1 661 203 51 6 chr18 22169515 22169673 -64507875 + L1M4 LINE L1 4841 5005 -1141 2187 105 3 10 chr18 22169701 22169997 -64507551 + AluSc SINE Alu 1 294 -15 2155 90 8 0 chr18 22170031 22170297 -64507251 + AluSq SINE Alu 1 268 -45 309 218 139 10 chr18 22170299 22170400 -64507148 + L1M4 LINE L1 5176 5289 -857 1653 61 28 5 chr18 22170402 22170615 -64506933 + AluSq SINE Alu 1 218 -95 1755 164 40 3 chr18 22173085 22173384 -64504164 + AluJb SINE Alu 1 310 -2 526 181 0 0 chr18 22173609 22173703 -64503845 - AluJ/FRAM SINE Alu -3 309 216 198 0 0 0 chr18 22173739 22173761 -64503787 + (T)n Simple_repeat Simple_repeat 1 22 0 2369 101 0 3 chr18 22173889 22174195 -64503353 + AluSq SINE Alu 1 305 -8 2239 99 0 7 chr18 22174199 22174514 -64503034 + AluSg SINE Alu 1 313 0 1983 114 18 7 chr18 22174611 22174892 -64502656 + AluSq SINE Alu 1 284 -29 755 181 114 0 chr18 22174914 22175063 -64502485 - MLT1H LTR MaLR -323 226 61 201 337 92 0 chr18 22175244 22175342 -64502206 + MIR SINE MIR 28 134 -128 1754 157 77 4 chr18 22175375 22175649 -64501899 + AluSx SINE Alu 1 294 -18 1871 125 0 96 chr18 22175708 22176043 -64501505 + AluSx SINE Alu 1 303 -9 2288 97 0 3 chr18 22176102 22176402 -64501146 + AluSx SINE Alu 1 299 -13 2146 116 0 3 chr18 22176908 22177192 -64500356 + AluSx SINE Alu 1 283 -29 2229 111 3 0 chr18 22177216 22177514 -64500034 + AluSg SINE Alu 1 299 -11 810 166 0 29 chr18 22177721 22177860 -64499688 + AluJo SINE Alu 2 136 -176 2387 92 0 19 chr18 22178140 22178454 -64499094 + AluY SINE Alu 1 308 -3 29 0 0 0 chr18 22178532 22178561 -64498987 + AT_rich Low_complexity Low_complexity 1 29 0 521 203 120 38 chr18 22178770 22178920 -64498628 - MLT1J LTR MaLR -3 508 346 435 19 0 0 chr18 22178920 22178972 -64498576 - MADE1 DNA Mariner 0 80 29 374 67 133 0 chr18 22179002 22179062 -64498486 + MADE1 DNA Mariner 13 80 0 * 1000 217 115 58 chr18 22179062 22179259 -64498289 - MLT1J LTR MaLR -188 323 100 2275 95 17 7 chr18 22179259 22179554 -64497994 + AluSq SINE Alu 1 298 -15 1000 217 115 58 chr18 22179554 22179660 -64497888 - MLT1J LTR MaLR -411 100 2 2026 110 43 17 chr18 22180192 22180493 -64497055 + AluSx SINE Alu 1 309 -3 507 311 111 17 chr18 22181144 22181379 -64496169 + MIR SINE MIR 2 258 -4 226 348 86 37 chr18 22182147 22182334 -64495214 - MIR SINE MIR -14 248 53 2306 99 7 0 chr18 22182339 22182631 -64494917 + AluSq SINE Alu 1 294 -19 1336 230 115 33 chr18 22183140 22183570 -64493978 - L1ME LINE L1 -3450 2630 2237 2345 108 0 3 chr18 22183570 22183876 -64493672 - AluSq SINE Alu -8 305 1 1336 230 115 33 chr18 22183876 22183971 -64493577 - L1ME LINE L1 -3843 2237 2151 2262 99 7 0 chr18 22183971 22184265 -64493283 - AluSx SINE Alu -12 300 5 1336 230 115 33 chr18 22184265 22184304 -64493244 - L1ME LINE L1 -3929 2151 2057 2055 242 64 76 chr18 22184335 22185014 -64492534 - L1ME LINE L1 -5142 938 281 2330 111 3 0 chr18 22185014 22185321 -64492227 - AluSq SINE Alu -5 308 1 2055 242 64 76 chr18 22185321 22185594 -64491954 - L1ME LINE L1 -5799 281 6 187 229 184 46 chr18 22186001 22186110 -64491438 + L2 LINE L2 3190 3313 0 279 104 26 117 chr18 22186124 22186201 -64491347 + MIR SINE MIR 193 262 0 547 167 59 0 chr18 22186431 22186533 -64491015 - AluJb SINE Alu -7 305 198 1204 159 33 9 chr18 22186572 22186786 -64490762 + MER20 DNA MER1_type 1 219 0 2373 80 0 10 chr18 22187078 22187377 -64490171 + AluY SINE Alu 1 296 -15 1847 154 31 3 chr18 22187379 22187671 -64489877 + AluJo SINE Alu 1 300 -12 1856 136 3 52 chr18 22188446 22188591 -64488957 + AluJb SINE Alu 1 125 -187 2190 136 0 0 chr18 22188591 22188892 -64488656 + AluSx SINE Alu 1 301 -11 1856 136 3 52 chr18 22188892 22189055 -64488493 + AluJb SINE Alu 125 294 -18 215 250 26 26 chr18 22189605 22189681 -64487867 - MIR SINE MIR -2 260 185 2478 79 0 16 chr18 22189966 22190284 -64487264 + AluSq SINE Alu 1 313 0 42 20 0 0 chr18 22190883 22190932 -64486616 + AT_rich Low_complexity Low_complexity 1 49 0 212 331 29 37 chr18 22191931 22192067 -64485481 - L2 LINE L2 0 3272 3138 1664 140 48 48 chr18 22192442 22192734 -64484814 - AluJo SINE Alu -20 292 1 397 276 122 0 chr18 22192743 22192866 -64484682 - MIR SINE MIR -120 142 5 244 312 91 56 chr18 22192963 22193533 -64484015 - L2 LINE L2 -575 2739 2150 813 138 0 0 chr18 22193561 22193677 -64483871 + AluJb SINE Alu 1 116 -196 261 0 0 0 chr18 22193707 22193736 -64483812 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 262 101 54 chr18 22194104 22194272 -64483276 + MIR SINE MIR 27 202 -60 2146 142 0 7 chr18 22194273 22194583 -64482965 + AluSx SINE Alu 1 308 -4 901 130 0 0 chr18 22194615 22194738 -64482810 + AluSq/x SINE Alu 1 123 -190 46 16 0 16 chr18 22194738 22194764 -64482784 + AT_rich Low_complexity Low_complexity 1 26 -37 2241 102 7 0 chr18 22194764 22195049 -64482499 + AluSg SINE Alu 1 287 -23 46 16 0 16 chr18 22195049 22195086 -64482462 + AT_rich Low_complexity Low_complexity 26 63 0 236 135 0 0 chr18 22196056 22196093 -64481455 + L1MB5 LINE L1 5929 5965 -209 2541 146 121 37 chr18 22196223 22196334 -64481214 + L1MB8 LINE L1 5561 5661 -517 1893 145 24 7 chr18 22196334 22196624 -64480924 + AluJo SINE Alu 1 295 -17 2094 84 70 14 chr18 22196626 22196937 -64480611 + AluSc SINE Alu 1 309 0 2541 146 121 37 chr18 22196937 22197083 -64480465 + L1MB8 LINE L1 5661 5793 -385 2225 75 0 46 chr18 22197083 22197388 -64480160 + AluY SINE Alu 1 291 -20 2541 146 121 37 chr18 22197388 22197695 -64479853 + L1MB8 LINE L1 5793 6177 -1 2160 121 3 0 chr18 22197900 22198189 -64479359 + AluSx SINE Alu 1 290 -22 531 149 35 26 chr18 22198190 22198304 -64479244 - L1MA7 LINE L1 -2 6289 6175 922 184 34 58 chr18 22198413 22198619 -64478929 + MLT1A2 LTR MaLR 1 201 -173 636 100 0 0 chr18 22198619 22198709 -64478839 - L1MA8 LINE L1 -173 6118 6029 442 149 0 0 chr18 22198709 22198776 -64478772 - AluJ/FLAM SINE Alu -241 71 5 23 0 0 0 chr18 22198784 22198807 -64478741 + AT_rich Low_complexity Low_complexity 1 23 0 2384 88 0 10 chr18 22199024 22199330 -64478218 + AluY SINE Alu 1 303 -8 459 92 0 0 chr18 22199962 22200027 -64477521 + (GGAA)n Simple_repeat Simple_repeat 4 68 0 751 218 6 29 chr18 22200312 22200482 -64477066 + FRAM SINE Alu 1 166 -10 953 108 0 23 chr18 22200484 22200614 -64476934 + FLAM_C SINE Alu 1 127 -16 297 280 30 20 chr18 22200784 22200884 -64476664 + MIR SINE MIR 11 111 -151 1897 120 6 79 chr18 22201329 22201646 -64475902 - AluSx SINE Alu -18 294 1 1453 172 33 69 chr18 22201674 22201977 -64475571 + AluJo SINE Alu 1 292 -20 239 208 169 26 chr18 22201978 22202055 -64475493 + MLT1A2 LTR MaLR 259 346 -308 1247 205 34 0 chr18 22202056 22202295 -64475253 + MLT1E1 LTR MaLR 406 652 -2 2292 104 0 0 chr18 22202424 22202723 -64474825 + AluSq SINE Alu 1 299 -14 1565 125 0 4 chr18 22202875 22203123 -64474425 - L1MA5 LINE L1 -2 6298 6052 293 277 184 41 chr18 22203132 22203475 -64474073 - MLT1J LTR MaLR -78 433 42 1737 141 55 102 chr18 22203476 22203716 -64473832 - MLT1A1 LTR MaLR -1 364 147 2087 129 0 0 chr18 22203716 22204003 -64473545 - AluSx SINE Alu -25 287 1 1737 141 55 102 chr18 22204003 22204144 -64473404 - MLT1A1 LTR MaLR -218 147 1 262 128 0 0 chr18 22204150 22204189 -64473359 + MLT1A2 LTR MaLR 264 302 -72 2199 107 0 3 chr18 22204498 22204788 -64472760 + AluSx SINE Alu 1 289 -23 189 204 56 74 chr18 22204811 22204865 -64472683 + L2 LINE L2 2397 2449 -865 343 374 54 51 chr18 22204866 22205459 -64472089 + L2 LINE L2 2569 3211 -61 961 192 5 10 chr18 22205462 22205665 -64471883 - L1ME1 LINE L1 -262 5904 5703 2575 56 3 0 chr18 22205665 22205971 -64471577 + AluY SINE Alu 1 307 -4 22 0 0 0 chr18 22206042 22206064 -64471484 + AT_rich Low_complexity Low_complexity 1 22 0 30 27 0 0 chr18 22206287 22206324 -64471224 + AT_rich Low_complexity Low_complexity 1 37 0 30 59 0 0 chr18 22206354 22206405 -64471143 + AT_rich Low_complexity Low_complexity 1 51 0 2336 100 0 0 chr18 22206447 22206747 -64470801 - AluSg1 SINE Alu -9 300 1 471 196 78 10 chr18 22206750 22206852 -64470696 - MER3 DNA MER1_type -99 110 2 417 277 61 7 chr18 22206883 22207031 -64470517 + L2 LINE L2 3158 3313 0 2373 88 3 0 chr18 22207036 22207331 -64470217 + AluSq SINE Alu 1 296 -17 2480 53 26 3 chr18 22207336 22207639 -64469909 + AluY SINE Alu 1 310 -1 324 274 12 0 chr18 22207650 22207734 -64469814 + L2 LINE L2 3180 3264 -49 1715 208 27 27 chr18 22207783 22207888 -64469660 + LTR56 LTR ERV1 9 112 -325 1517 134 82 37 chr18 22207888 22208156 -64469392 + AluJb SINE Alu 1 280 -32 1715 208 27 27 chr18 22208156 22208505 -64469043 + LTR56 LTR ERV1 112 437 0 2228 105 0 10 chr18 22208563 22208867 -64468681 + AluSg SINE Alu 1 301 -9 473 240 39 90 chr18 22209710 22209943 -64467605 + MLT1K LTR MaLR 366 586 -2 1309 68 0 0 chr18 22210239 22210402 -64467146 - L1PA14 LINE L1 -4 6157 5995 2077 101 66 0 chr18 22210414 22210701 -64466847 - AluSq SINE Alu -7 306 1 2204 116 10 6 chr18 22211082 22211393 -64466155 + AluSx SINE Alu 1 312 0 300 204 26 20 chr18 22211972 22212048 -64465500 - AluSg/x SINE Alu -121 181 120 1236 147 29 93 chr18 22212302 22212451 -64465097 + AluJb SINE Alu 1 121 -191 2400 70 3 7 chr18 22212451 22212749 -64464799 + AluSg SINE Alu 1 297 -13 1236 147 29 93 chr18 22212749 22212912 -64464636 + AluJb SINE Alu 121 293 -19 2110 99 13 33 chr18 22213141 22213443 -64464105 - AluSx SINE Alu -16 296 1 1772 134 17 21 chr18 22215314 22215604 -64461944 - AluJb SINE Alu -21 291 3 2426 77 0 7 chr18 22215948 22216248 -64461300 - AluSx SINE Alu -14 298 1 880 119 108 26 chr18 22216962 22217156 -64460392 - Charlie1 DNA MER1_type -1 2760 2551 706 172 0 0 chr18 22217156 22217272 -64460276 - FLAM_A SINE Alu -11 131 16 871 146 115 12 chr18 22217293 22217659 -64459889 - Charlie1 DNA MER1_type -188 2573 2144 2078 97 41 10 chr18 22217825 22218115 -64459433 - AluSx SINE Alu -13 299 1 21 57 0 0 chr18 22218151 22218186 -64459362 + AT_rich Low_complexity Low_complexity 1 35 0 476 149 0 0 chr18 22218321 22218395 -64459153 - Charlie1 DNA MER1_type 0 2761 2688 853 145 8 0 chr18 22218428 22218559 -64458989 - AluJb SINE Alu -180 132 1 2362 56 0 3 chr18 22218657 22218984 -64458564 - AluY SINE Alu 0 326 1 1829 76 4 8 chr18 22218986 22219222 -64458326 - AluY SINE Alu -18 293 59 1014 171 17 86 chr18 22219525 22219759 -64457789 + MER20 DNA MER1_type 2 219 0 306 0 0 0 chr18 22220070 22220104 -64457444 + (TCTCCC)n Simple_repeat Simple_repeat 6 39 0 6181 64 15 61 chr18 22220108 22222042 -64455506 + SVA Other Other 38 1386 0 821 229 40 50 chr18 22222287 22222695 -64454853 - MLT1D LTR MaLR -6 499 2 2072 104 27 7 chr18 22222737 22223035 -64454513 - AluSc SINE Alu -5 304 1 199 51 0 51 chr18 22223059 22223098 -64454450 + (TTAAA)n Simple_repeat Simple_repeat 4 40 0 2173 117 3 0 chr18 22223184 22223482 -64454066 + AluSg SINE Alu 1 299 -11 2300 69 31 0 chr18 22223576 22223866 -64453682 + AluY SINE Alu 1 299 -12 2305 92 10 0 chr18 22224441 22224735 -64452813 - AluSx SINE Alu -15 297 1 1525 156 102 0 chr18 22224783 22225060 -64452488 - AluJb SINE Alu 0 303 1 526 55 14 0 chr18 22225250 22225323 -64452225 - MER41B LTR ERV1 -81 554 481 452 259 130 69 chr18 22225323 22225570 -64451978 - L1M4 LINE L1 -1182 4964 4703 977 209 12 0 chr18 22225579 22225751 -64451797 - FAM SINE Alu 0 175 2 1460 169 154 0 chr18 22225779 22226039 -64451509 - AluJo SINE Alu -1 301 2 3874 203 81 46 chr18 22226090 22227173 -64450375 + L1M4 LINE L1 3259 4379 -1767 3482 144 54 13 chr18 22227182 22227792 -64449756 + L1MA4 LINE L1 5662 6296 -4 1392 166 0 9 chr18 22227800 22228023 -64449525 + AluJo SINE Alu 1 221 -91 263 130 0 0 chr18 22228024 22228070 -64449478 + FLAM_A SINE Alu 87 132 -1 984 205 30 4 chr18 22228072 22228306 -64449242 + L1M4 LINE L1 4702 4941 -1205 2052 84 11 7 chr18 22228536 22228809 -64448739 - AluSg1 SINE Alu -13 296 23 1518 159 10 57 chr18 22228855 22229169 -64448379 - AluJb SINE Alu -13 299 1 349 227 32 81 chr18 22229600 22229785 -64447763 - L1MC4a LINE L1 -1790 6018 5843 813 244 99 23 chr18 22229812 22230033 -64447515 - L1ME1 LINE L1 -5 6161 5924 2095 133 0 0 chr18 22230033 22230333 -64447215 - AluSx SINE Alu -12 300 1 512 157 61 17 chr18 22230378 22230493 -64447055 - L1ME1 LINE L1 -230 5934 5815 1995 110 35 3 chr18 22230495 22230785 -64446763 - AluSx SINE Alu -12 300 2 348 170 11 43 chr18 22230897 22230991 -64446557 - L1ME1 LINE L1 -2314 5494 5404 2063 129 14 3 chr18 22231168 22231463 -64446085 + AluSq SINE Alu 1 298 -15 1090 174 32 50 chr18 22231604 22231823 -64445725 - AluJb SINE Alu -23 289 75 640 205 60 0 chr18 22231834 22231951 -64445597 - FLAM_A SINE Alu -9 124 1 1171 144 5 0 chr18 22232055 22232243 -64445305 - AluSg/x SINE Alu -1 309 121 2213 78 0 33 chr18 22232358 22232665 -64444883 - AluY SINE Alu -14 297 1 2120 103 4 4 chr18 22232706 22232987 -64444561 - AluSp SINE Alu -32 281 1 828 236 84 26 chr18 22233107 22233416 -64444132 - HAL1 LINE L1 -761 1746 1420 2060 137 0 10 chr18 22233496 22233796 -64443752 + AluSx SINE Alu 1 297 -15 1137 147 0 0 chr18 22233796 22233952 -64443596 + AluSg/x SINE Alu 135 290 -22 648 214 23 8 chr18 22233954 22234085 -64443463 - FLAM_A SINE Alu 0 133 1 1453 231 145 73 chr18 22234091 22234941 -64442607 - HAL1 LINE L1 -1162 1345 435 2257 113 3 0 chr18 22234981 22235281 -64442267 - AluSq SINE Alu -12 301 1 606 259 67 78 chr18 22235284 22235554 -64441994 - L1ME LINE L1 -5798 272 6 217 229 184 46 chr18 22235961 22236070 -64441478 + L2 LINE L2 3190 3313 0 300 104 26 117 chr18 22236084 22236161 -64441387 + MIR SINE MIR 193 262 0 583 167 59 0 chr18 22236391 22236493 -64441055 - AluJb SINE Alu -7 305 198 1149 138 35 91 chr18 22236532 22236764 -64440784 + MER20 DNA MER1_type 1 219 0 2349 80 0 10 chr18 22237056 22237355 -64440193 + AluY SINE Alu 1 296 -15 1828 154 31 3 chr18 22237357 22237649 -64439899 + AluJo SINE Alu 1 300 -12 1832 136 3 52 chr18 22238424 22238569 -64438979 + AluJb SINE Alu 1 125 -187 2174 136 0 0 chr18 22238569 22238870 -64438678 + AluSx SINE Alu 1 301 -11 1832 136 3 52 chr18 22238870 22239033 -64438515 + AluJb SINE Alu 125 294 -18 234 250 26 26 chr18 22239583 22239659 -64437889 - MIR SINE MIR -2 260 185 2378 76 0 16 chr18 22239944 22240247 -64437301 + AluSq SINE Alu 1 298 -15 1880 132 29 32 chr18 22240695 22240833 -64436715 + AluSx SINE Alu 1 138 -174 2311 91 3 0 chr18 22240833 22241131 -64436417 + AluSg SINE Alu 1 299 -11 1880 132 29 32 chr18 22241131 22241302 -64436246 + AluSx SINE Alu 138 309 -3 2253 94 14 0 chr18 22241493 22241790 -64435758 - AluY SINE Alu -10 301 1 1534 165 12 4 chr18 22241823 22242072 -64435476 + AluJo SINE Alu 39 289 -23 2171 118 3 0 chr18 22242080 22242367 -64435181 + AluSq SINE Alu 1 288 -25 1524 190 16 33 chr18 22242392 22242697 -64434851 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr18 22243653 22243675 -64433873 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 26 0 0 0 chr18 22244110 22244136 -64433412 + AT_rich Low_complexity Low_complexity 1 26 0 284 239 128 43 chr18 22244800 22244917 -64432631 - L1MC5 LINE L1 -127 7834 7708 973 124 0 15 chr18 22244918 22245055 -64432493 + AluSq/x SINE Alu 1 135 -177 2092 134 0 3 chr18 22245055 22245353 -64432195 + AluSx SINE Alu 1 297 -15 2257 102 3 0 chr18 22245353 22245646 -64431902 + AluSp SINE Alu 1 294 -19 1942 143 17 0 chr18 22245669 22245969 -64431579 - AluSg SINE Alu -5 305 1 480 249 80 34 chr18 22245975 22246212 -64431336 - L1MC5 LINE L1 -240 7721 7474 2033 126 3 7 chr18 22246735 22247029 -64430519 + AluSg SINE Alu 3 295 -15 1137 147 0 0 chr18 22247029 22247185 -64430363 + AluSg/x SINE Alu 133 288 -22 648 214 23 8 chr18 22247187 22247318 -64430230 - FLAM_A SINE Alu 0 133 1 1710 238 155 81 chr18 22247324 22248214 -64429334 - HAL1 LINE L1 -1162 1345 522 2376 66 0 3 chr18 22248214 22248502 -64429046 - AluY SINE Alu -11 300 14 2237 115 0 19 chr18 22248507 22248820 -64428728 - AluSq SINE Alu -6 307 1 1710 238 155 81 chr18 22248820 22248842 -64428706 - HAL1 LINE L1 -1988 519 500 2398 84 0 3 chr18 22248842 22249140 -64428408 - AluSg SINE Alu -13 297 1 1710 238 155 81 chr18 22249140 22249366 -64428182 - HAL1 LINE L1 -2007 500 292 1368 236 24 3 chr18 22249366 22249663 -64427885 - AluJo SINE Alu -7 305 3 1710 238 155 81 chr18 22249663 22249763 -64427785 - HAL1 LINE L1 -2215 292 7 21 82 0 0 chr18 22250742 22250791 -64426757 + AT_rich Low_complexity Low_complexity 1 49 0 2262 102 3 0 chr18 22252915 22253209 -64424339 - AluSp SINE Alu -18 295 1 265 287 157 9 chr18 22253639 22253747 -64423801 - MIR SINE MIR -66 142 19 2091 119 0 10 chr18 22254403 22254697 -64422851 + AluSx SINE Alu 2 292 -20 2323 72 7 0 chr18 22254902 22255195 -64422353 - AluY SINE Alu -16 295 1 1936 162 0 3 chr18 22255493 22255789 -64421759 + AluJo SINE Alu 1 295 -17 253 314 128 0 chr18 22255884 22255986 -64421562 - L2 LINE L2 -4 3309 3195 2025 106 0 27 chr18 22256028 22256180 -64421368 - AluSc SINE Alu -16 293 151 1842 105 8 0 chr18 22256180 22256428 -64421120 - AluSq SINE Alu -63 250 1 2025 106 0 27 chr18 22256428 22256576 -64420972 - AluSc SINE Alu -158 151 1 635 153 42 0 chr18 22256852 22256970 -64420578 - MER33 DNA MER1_type 0 363 241 2365 94 0 0 chr18 22256974 22257271 -64420277 - AluSx SINE Alu -15 297 1 390 171 86 19 chr18 22257278 22257383 -64420165 - MER33 DNA MER1_type -206 118 7 651 242 0 30 chr18 22257459 22257591 -64419957 - FLAM_A SINE Alu -5 128 1 1836 147 19 26 chr18 22258422 22258735 -64418813 + AluSx SINE Alu 1 311 -1 2137 111 3 3 chr18 22259011 22259308 -64418240 - AluSx SINE Alu -14 298 2 21 0 0 0 chr18 22259311 22259332 -64418216 + AT_rich Low_complexity Low_complexity 1 21 0 1520 180 46 26 chr18 22259926 22260231 -64417317 - AluJo SINE Alu 0 312 2 1999 114 3 56 chr18 22260787 22261111 -64416437 - AluSx SINE Alu -5 307 1 2503 56 0 20 chr18 22261192 22261494 -64416054 + AluY SINE Alu 2 297 -14 1379 218 122 55 chr18 22261729 22262132 -64415416 - MSTB1 LTR MaLR -2 430 1 2160 121 0 0 chr18 22262239 22262528 -64415020 + AluSx SINE Alu 1 289 -23 2153 122 3 0 chr18 22262718 22263012 -64414536 + AluSp SINE Alu 3 297 -16 1034 169 0 12 chr18 22263233 22263399 -64414149 - AluJb SINE Alu -17 295 132 1905 84 103 0 chr18 22263404 22263665 -64413883 - AluSg SINE Alu -12 298 11 2161 109 0 10 chr18 22263712 22264014 -64413534 + AluSx SINE Alu 5 303 -9 1070 131 17 62 chr18 22264022 22264160 -64413388 + AluJb SINE Alu 3 133 -179 2151 129 3 3 chr18 22264160 22264462 -64413086 + AluSx SINE Alu 1 302 -10 1070 131 17 62 chr18 22264462 22264499 -64413049 + AluJb SINE Alu 133 170 -142 2154 136 7 0 chr18 22267140 22267441 -64410107 - AluSx SINE Alu -9 303 1 993 150 66 79 chr18 22267694 22267921 -64409627 + AluJb SINE Alu 86 309 -3 23 33 0 0 chr18 22268373 22268403 -64409145 + AT_rich Low_complexity Low_complexity 1 30 0 2103 118 3 0 chr18 22268897 22269186 -64408362 + AluSx SINE Alu 10 299 -13 1867 170 3 16 chr18 22269599 22269911 -64407637 - AluJo SINE Alu 0 312 5 944 174 54 0 chr18 22269917 22270066 -64407482 - AluJo/FRAM SINE Alu -9 293 137 1288 173 0 0 chr18 22270069 22270283 -64407265 - AluJo SINE Alu -13 299 86 4996 170 48 69 chr18 22270317 22270789 -64406759 - L1MC1 LINE L1 -22 6311 5831 1964 112 0 66 chr18 22270789 22270950 -64406598 - AluSx SINE Alu -27 285 152 1980 152 7 0 chr18 22270950 22271260 -64406288 - AluSx SINE Alu 0 312 1 1964 112 0 66 chr18 22271260 22271403 -64406145 - AluSx SINE Alu -160 152 1 4996 170 48 69 chr18 22271403 22271991 -64405557 - L1MC1 LINE L1 -502 5831 5232 2070 108 6 37 chr18 22271991 22272314 -64405234 - AluSp SINE Alu 0 313 1 4996 170 48 69 chr18 22272314 22272425 -64405123 - L1MC1 LINE L1 -1101 5232 5120 577 209 14 58 chr18 22272425 22272564 -64404984 - FLAM_C SINE Alu 0 133 1 4996 170 48 69 chr18 22272564 22272588 -64404960 - L1MC1 LINE L1 -1213 5120 5097 1683 204 0 0 chr18 22272588 22272882 -64404666 - AluJb SINE Alu -18 294 1 4996 170 48 69 chr18 22272882 22273260 -64404288 - L1MC1 LINE L1 -1236 5097 4773 2621 105 13 8 chr18 22273260 22273633 -64403915 - THE1C LTR MaLR 0 375 1 4996 170 48 69 chr18 22273633 22273876 -64403672 - L1MC1 LINE L1 -1560 4773 4527 349 258 12 61 chr18 22273878 22274041 -64403507 - L1MCc LINE L1 -5089 1334 1180 1869 65 150 0 chr18 22274441 22274701 -64402847 - AluY SINE Alu -2 299 1 2488 77 0 3 chr18 22274749 22275060 -64402488 - AluY SINE Alu -1 310 1 2200 115 14 0 chr18 22275910 22276206 -64401342 - AluSx SINE Alu -12 300 1 1610 116 0 0 chr18 22276254 22276469 -64401079 + AluSg/x SINE Alu 79 293 -19 324 309 84 31 chr18 22276473 22276664 -64400884 - MLT1L LTR MaLR -93 522 322 1853 162 7 7 chr18 22276937 22277233 -64400315 - AluJo SINE Alu -16 296 1 593 161 24 24 chr18 22277251 22277375 -64400173 - FLAM_C SINE Alu -9 124 1 2019 157 0 10 chr18 22277375 22277680 -64399868 - AluJb SINE Alu -10 302 1 2372 86 3 0 chr18 22277766 22278069 -64399479 - AluY SINE Alu -7 304 1 192 329 60 60 chr18 22278413 22278562 -64398986 + MIR SINE MIR 2 150 -112 279 262 114 34 chr18 22278817 22279019 -64398529 - L2 LINE L2 -264 3008 2783 1959 147 0 0 chr18 22279044 22279336 -64398212 + AluJb SINE Alu 1 292 -20 220 258 11 56 chr18 22279375 22279464 -64398084 - MIR SINE MIR 0 262 178 718 150 16 31 chr18 22279496 22279623 -64397925 - AluJb SINE Alu -187 125 1 548 289 20 13 chr18 22279623 22279775 -64397773 - MIR SINE MIR -108 154 2 2195 94 3 7 chr18 22279946 22280244 -64397304 - AluSq SINE Alu -16 297 1 2167 111 3 0 chr18 22280302 22280599 -64396949 - AluSx SINE Alu -14 298 1 326 210 123 74 chr18 22280617 22280656 -64396892 - L1ME3A LINE L1 -5 6165 6129 752 184 0 22 chr18 22280656 22280792 -64396756 + FLAM_C SINE Alu 1 133 0 326 210 123 74 chr18 22280792 22280914 -64396634 - L1ME3A LINE L1 -41 6129 5996 533 206 128 140 chr18 22281117 22281244 -64396304 - L1MC5 LINE L1 -85 7876 7749 2134 104 0 69 chr18 22281244 22281562 -64395986 - AluSq SINE Alu -13 300 5 533 206 128 140 chr18 22281562 22281602 -64395946 - L1MC5 LINE L1 -212 7749 7710 2253 94 0 3 chr18 22281602 22281899 -64395649 - AluY SINE Alu -15 296 1 533 206 128 140 chr18 22281899 22282158 -64395390 - L1MC5 LINE L1 -251 7710 7454 304 224 51 10 chr18 22282244 22282342 -64395206 - L1ME2 LINE L1 -2 6162 6061 2170 79 7 11 chr18 22282458 22282737 -64394811 + AluSp SINE Alu 26 303 -10 309 297 50 10 chr18 22283405 22283506 -64394042 - MIR SINE MIR -128 134 30 1114 118 0 7 chr18 22283537 22283690 -64393858 + FRAM SINE Alu 1 149 -27 1908 93 60 43 chr18 22284271 22284572 -64392976 - AluSc SINE Alu -3 306 1 24 0 0 0 chr18 22284758 22284782 -64392766 + AT_rich Low_complexity Low_complexity 1 24 0 195 129 0 0 chr18 22285846 22285877 -64391671 + (TA)n Simple_repeat Simple_repeat 2 32 0 2040 131 7 0 chr18 22286024 22286321 -64391227 - AluSg SINE Alu -11 299 1 711 188 0 102 chr18 22287511 22287587 -64389961 - Tigger2 DNA MER2_type 0 2708 2659 904 128 0 0 chr18 22287587 22287720 -64389828 - FLAM_C SINE Alu 0 133 1 711 188 0 102 chr18 22287720 22287819 -64389729 - Tigger2 DNA MER2_type -49 2659 2551 * 1222 127 0 28 chr18 22287818 22288031 -64389517 - Tigger2 DNA MER2_type -2511 207 1 1533 170 81 7 chr18 22288327 22288610 -64388938 - AluJo SINE Alu 0 312 9 331 289 96 69 chr18 22288752 22288970 -64388578 + MIR SINE MIR 23 246 -16 2150 130 0 3 chr18 22289280 22289581 -64387967 - AluSx SINE Alu -12 300 1 22 35 0 0 chr18 22289656 22289685 -64387863 + AT_rich Low_complexity Low_complexity 1 29 0 2205 111 0 10 chr18 22290073 22290207 -64387341 + AluSg SINE Alu 1 135 -175 2239 100 10 3 chr18 22290207 22290508 -64387040 + AluSg SINE Alu 1 303 -7 2205 111 0 10 chr18 22290508 22290671 -64386877 + AluSg SINE Alu 135 295 -15 825 207 72 5 chr18 22290763 22290956 -64386592 + MER58A DNA MER1_type 1 206 -18 2063 121 14 3 chr18 22290967 22291256 -64386292 + AluSg SINE Alu 3 294 -16 1042 56 0 28 chr18 22291551 22291694 -64385854 + MER85 DNA T2_type 1 139 0 1012 163 23 6 chr18 22291813 22291985 -64385563 + FAM SINE Alu 1 175 0 1752 100 4 0 chr18 22292364 22292593 -64384955 + AluSg/x SINE Alu 72 301 -11 24 0 0 0 chr18 22292633 22292657 -64384891 + AT_rich Low_complexity Low_complexity 1 24 0 348 294 138 25 chr18 22292931 22293091 -64384457 - MIR SINE MIR -50 212 35 1365 111 250 16 chr18 22293972 22294216 -64383332 - AluSg1 SINE Alu -8 301 1 941 127 8 0 chr18 22294216 22294350 -64383198 - AluJo SINE Alu -177 135 1 1627 204 85 34 chr18 22294355 22294436 -64383112 - L1M4 LINE L1 -1656 4490 4415 1577 175 38 17 chr18 22294436 22294727 -64382821 - AluJo SINE Alu -14 298 2 1627 204 85 34 chr18 22294727 22295209 -64382339 - L1M4 LINE L1 -1731 4415 3898 2089 116 7 7 chr18 22296983 22297275 -64380273 + AluSq SINE Alu 1 292 -21 216 0 0 0 chr18 22297372 22297396 -64380152 + (T)n Simple_repeat Simple_repeat 1 24 0 1592 246 81 35 chr18 22297701 22298049 -64379499 - L1ME2 LINE L1 -26 6138 5807 2417 87 0 7 chr18 22298049 22298359 -64379189 + AluSx SINE Alu 1 308 -4 1592 246 81 35 chr18 22298359 22298689 -64378859 - L1ME2 LINE L1 -357 5807 5429 2090 120 0 7 chr18 22298695 22299003 -64378545 - AluSx SINE Alu -6 306 1 688 243 77 54 chr18 22299175 22299398 -64378150 + MIR SINE MIR 2 235 -27 2426 82 0 0 chr18 22299757 22300050 -64377498 - AluSg SINE Alu -17 293 1 21 36 0 0 chr18 22300146 22300174 -64377374 + AT_rich Low_complexity Low_complexity 1 28 0 303 140 0 0 chr18 22300421 22300471 -64377077 + (TA)n Simple_repeat Simple_repeat 1 50 0 2193 94 0 0 chr18 22300471 22300758 -64376790 - AluSg SINE Alu -23 287 1 258 210 177 32 chr18 22300782 22300906 -64376642 - L1ME LINE L1 -295 5875 5734 22 35 0 0 chr18 22301395 22301424 -64376124 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr18 22302345 22302377 -64375171 + AT_rich Low_complexity Low_complexity 1 32 0 656 227 72 21 chr18 22302719 22302913 -64374635 + MLT1G1 LTR MaLR 3 206 -389 301 224 125 57 chr18 22303282 22303474 -64374074 + L1ME3A LINE L1 5423 5627 -494 351 273 91 36 chr18 22303494 22303659 -64373889 + L1ME3A LINE L1 5685 5858 -263 373 296 53 47 chr18 22304975 22305144 -64372404 + L2 LINE L2 2531 2700 -614 345 181 56 0 chr18 22305150 22305222 -64372326 - AluJ/FRAM SINE Alu 0 302 227 311 141 16 0 chr18 22305439 22305503 -64372045 + CT-rich Low_complexity Low_complexity 4 68 0 328 206 150 61 chr18 22305800 22305947 -64371601 - L1MC5 LINE L1 -38 7923 7756 228 35 0 0 chr18 22305947 22305976 -64371572 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 328 206 150 61 chr18 22305976 22306008 -64371540 - L1MC5 LINE L1 -205 7756 7728 255 313 92 23 chr18 22307821 22307952 -64369596 + MIR SINE MIR 13 152 -110 713 186 7 21 chr18 22307973 22308118 -64369430 + FLAM_C SINE Alu 1 143 0 2696 85 13 19 chr18 22308355 22308732 -64368816 - THE1C LTR MaLR 0 375 1 2450 77 0 0 chr18 22308765 22309063 -64368485 - AluY SINE Alu -13 298 1 325 345 102 10 chr18 22309442 22309639 -64367909 + MIR SINE MIR 48 262 0 32 91 0 0 chr18 22309750 22309838 -64367710 + AT_rich Low_complexity Low_complexity 1 88 0 536 244 127 42 chr18 22310676 22310984 -64366564 - HAL1 LINE L1 -630 1877 1544 2212 133 0 0 chr18 22311138 22311446 -64366102 + AluSx SINE Alu 1 308 -4 930 84 0 0 chr18 22311717 22311836 -64365712 - FLAM_C SINE Alu -14 119 1 317 207 12 24 chr18 22311959 22312041 -64365507 - L1MC5 LINE L1 -53 7908 7828 531 207 16 26 chr18 22312116 22312308 -64365240 - L1MC5 LINE L1 -551 7491 7260 334 277 39 69 chr18 22312810 22312940 -64364608 + L1ME3A LINE L1 5968 6093 -77 1749 95 8 21 chr18 22312967 22313208 -64364340 + AluSq SINE Alu 37 274 -39 1335 162 31 0 chr18 22313626 22313855 -64363693 + MER46A DNA MER2_type 1 236 0 21 0 0 0 chr18 22313892 22313913 -64363635 + AT_rich Low_complexity Low_complexity 1 21 0 2316 92 7 0 chr18 22314201 22314507 -64363041 + AluSq SINE Alu 2 309 -4 21 0 0 0 chr18 22314532 22314553 -64362995 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr18 22315306 22315351 -64362197 + AT_rich Low_complexity Low_complexity 1 45 0 1925 145 3 27 chr18 22315523 22315819 -64361729 + AluSx SINE Alu 1 289 -23 299 109 0 0 chr18 22315997 22316090 -64361458 - Alu SINE Alu 0 330 238 2152 95 0 0 chr18 22316138 22316461 -64361087 - AluY SINE Alu 0 323 1 1620 211 3 10 chr18 22316464 22316758 -64360790 - AluJo SINE Alu -20 292 1 390 259 48 32 chr18 22317001 22317182 -64360366 - L1MC/D LINE L1 -461 5701 5611 1841 135 19 39 chr18 22317201 22317513 -64360035 + AluJb SINE Alu 1 306 -6 2157 101 24 0 chr18 22317918 22318205 -64359343 + AluSx SINE Alu 1 294 -18 1835 149 38 3 chr18 22318353 22318642 -64358906 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr18 22318705 22318730 -64358818 + AT_rich Low_complexity Low_complexity 1 25 0 2083 125 0 19 chr18 22318762 22319074 -64358474 - AluSx SINE Alu -6 306 1 356 40 20 0 chr18 22321078 22321128 -64356420 + (TG)n Simple_repeat Simple_repeat 1 51 0 4299 144 20 31 chr18 22321323 22321846 -64355702 - L1MA4 LINE L1 0 6300 5788 710 197 0 0 chr18 22321846 22321968 -64355580 - FLAM_C SINE Alu -11 122 1 4299 144 20 31 chr18 22321968 22322261 -64355287 - L1MA4 LINE L1 -512 5788 5493 23 0 0 0 chr18 22322284 22322307 -64355241 + AT_rich Low_complexity Low_complexity 1 23 0 640 187 49 0 chr18 22322308 22322431 -64355117 - FLAM_C SINE Alu -4 129 1 575 163 32 16 chr18 22322443 22322566 -64354982 - L1MA4 LINE L1 -2550 3596 3472 1579 148 137 0 chr18 22322684 22322954 -64354594 - AluJb SINE Alu -4 308 2 730 171 18 0 chr18 22323021 22323153 -64354395 - MER58A DNA MER1_type 0 158 42 1185 172 10 5 chr18 22323153 22323356 -64354192 + U17 snRNA snRNA 1 204 -3 450 202 49 177 chr18 22323672 22323875 -64353673 - MER5B DNA MER1_type -1 177 1 802 152 0 8 chr18 22324053 22324178 -64353370 + FLAM_C SINE Alu 2 125 -18 2280 104 0 0 chr18 22324186 22324483 -64353065 + AluSg SINE Alu 2 298 -12 1888 161 0 3 chr18 22324565 22324869 -64352679 - AluJo SINE Alu -9 303 1 618 310 44 26 chr18 22326212 22326441 -64351107 - MIR SINE MIR -21 241 9 2496 58 0 10 chr18 22327117 22327427 -64350121 - AluY SINE Alu 0 311 5 1679 197 6 16 chr18 22328348 22328482 -64349066 + AluJo SINE Alu 1 135 -177 2074 144 7 0 chr18 22328482 22328781 -64348767 + AluSx SINE Alu 1 301 -11 1679 197 6 16 chr18 22328781 22328961 -64348587 + AluJo SINE Alu 135 312 0 21 0 0 0 chr18 22330339 22330360 -64347188 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 22334997 22335025 -64342523 + AT_rich Low_complexity Low_complexity 1 28 0 245 50 0 25 chr18 22336404 22336444 -64341104 + (CAAAAA)n Simple_repeat Simple_repeat 1 39 0 214 178 0 0 chr18 22336627 22336672 -64340876 + A-rich Low_complexity Low_complexity 1 45 0 180 0 0 0 chr18 22336788 22336808 -64340740 + (T)n Simple_repeat Simple_repeat 1 20 0 1089 219 32 16 chr18 22338453 22338700 -64338848 - MIR SINE MIR -10 252 2 235 263 0 18 chr18 22339028 22339085 -64338463 - L2 LINE L2 -1 3312 3257 246 224 86 0 chr18 22339280 22339338 -64338210 - L2 LINE L2 -1 3271 3209 274 231 0 15 chr18 22339916 22339981 -64337567 + MLT1F1 LTR MaLR 45 108 -459 2629 171 67 0 chr18 22340011 22340532 -64337016 + L1MC3 LINE L1 7211 7766 -19 197 275 100 75 chr18 22340900 22341020 -64336528 - L2 LINE L2 -810 2504 2382 2322 77 0 14 chr18 22341020 22341317 -64336231 + AluSg1 SINE Alu 3 295 -14 390 21 0 0 chr18 22341333 22341380 -64336168 + (CA)n Simple_repeat Simple_repeat 1 47 0 1844 149 0 30 chr18 22341502 22341803 -64335745 + AluJb SINE Alu 5 296 -16 816 90 0 0 chr18 22341805 22341916 -64335632 - AluY SINE Alu -13 298 188 408 232 305 18 chr18 22341929 22342214 -64335334 - HAL1 LINE L1 -5 2502 2136 2421 79 0 0 chr18 22342757 22343062 -64334486 + AluY SINE Alu 1 305 -6 30 0 0 0 chr18 22343235 22343265 -64334283 + AT_rich Low_complexity Low_complexity 1 30 0 274 196 0 20 chr18 22343631 22343682 -64333866 + AluY SINE Alu 117 166 -135 * 340 144 29 10 chr18 22343651 22343734 -64333814 + AluJo SINE Alu 79 128 -174 648 202 24 106 chr18 22344905 22345037 -64332511 - L1M4 LINE L1 -1361 4785 4675 1621 141 27 15 chr18 22345037 22345299 -64332249 - AluJb SINE Alu -14 298 34 648 202 24 106 chr18 22345299 22345374 -64332174 - L1M4 LINE L1 -1471 4675 4595 960 164 7 0 chr18 22345436 22345582 -64331966 + AluJo SINE Alu 134 280 -32 439 208 97 13 chr18 22345598 22345752 -64331796 - L1M4 LINE L1 -1761 4385 4219 518 214 65 79 chr18 22345821 22346036 -64331512 + L1M4 LINE L1 4824 5035 -1111 686 168 0 0 chr18 22346037 22346144 -64331404 + FLAM_C SINE Alu 1 107 -36 198 103 0 0 chr18 22346244 22346273 -64331275 + (A)n Simple_repeat Simple_repeat 1 29 0 364 284 39 0 chr18 22346508 22346610 -64330938 - MIR SINE MIR -32 230 125 1831 97 74 0 chr18 22348614 22348872 -64328676 - AluSx SINE Alu -35 277 1 2600 221 37 18 chr18 22348874 22349145 -64328403 - L1ME LINE L1 -676 5486 5222 2271 94 10 10 chr18 22349145 22349453 -64328095 - AluY SINE Alu -3 308 1 2600 221 37 18 chr18 22349453 22349757 -64327791 - L1ME LINE L1 -940 5222 4894 2135 136 0 3 chr18 22349757 22350066 -64327482 - AluSg SINE Alu -2 308 1 2600 221 37 18 chr18 22350066 22350323 -64327225 - L1ME LINE L1 -1268 4894 4643 276 167 19 0 chr18 22350324 22350378 -64327170 + Charlie1 DNA MER1_type 2707 2761 0 503 258 96 30 chr18 22350385 22350552 -64326996 + MIR SINE MIR 84 261 -1 357 307 98 74 chr18 22350583 22350909 -64326639 - MLT1K LTR MaLR -137 451 118 29 49 0 16 chr18 22351612 22351651 -64325897 + AT_rich Low_complexity Low_complexity 1 40 -20 616 212 34 0 chr18 22351651 22351769 -64325779 - FLAM_A SINE Alu -11 122 1 29 49 0 16 chr18 22351769 22351790 -64325758 + AT_rich Low_complexity Low_complexity 40 60 0 2060 91 46 11 chr18 22352321 22352606 -64324942 + AluSq SINE Alu 1 295 -18 460 245 77 56 chr18 22353984 22354180 -64323368 - L1MC5 LINE L1 -516 7445 7246 220 250 21 0 chr18 22354828 22354876 -64322672 - MIR SINE MIR -21 241 193 29 60 0 0 chr18 22355529 22355579 -64321969 + AT_rich Low_complexity Low_complexity 1 50 0 236 286 211 14 chr18 22355840 22355987 -64321561 + L1ME LINE L1 5492 5667 -454 180 0 0 0 chr18 22358000 22358020 -64319528 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 647 130 19 9 chr18 22358023 22358131 -64319417 - AluSg/x SINE Alu -25 287 179 231 114 0 0 chr18 22358132 22358176 -64319372 + Alu SINE Alu 257 300 0 965 213 8 71 chr18 22358367 22358606 -64318942 - MER58A DNA MER1_type 0 224 1 222 37 0 0 chr18 22358739 22358766 -64318782 + (T)n Simple_repeat Simple_repeat 1 27 0 1915 156 23 0 chr18 22359017 22359318 -64318230 - AluSx SINE Alu -4 308 1 1242 226 0 15 chr18 22359691 22359956 -64317592 + AluJo SINE Alu 22 282 -30 213 156 62 0 chr18 22360157 22360221 -64317327 + (TATAA)n Simple_repeat Simple_repeat 3 70 0 1915 151 17 0 chr18 22360819 22361111 -64316437 - AluJo SINE Alu -15 297 1 312 274 170 0 chr18 22361552 22361687 -64315861 + MIR SINE MIR 1 158 -104 354 98 0 16 chr18 22361891 22361952 -64315596 - Alu SINE Alu 0 302 243 2486 182 189 53 chr18 22361954 22362638 -64314910 - LTR28 LTR ERV1 -4 822 121 2391 86 0 7 chr18 22362638 22362939 -64314609 + AluSc SINE Alu 1 299 -10 2486 182 189 53 chr18 22362939 22363079 -64314469 - LTR28 LTR ERV1 -705 121 1 626 213 0 0 chr18 22363079 22363201 -64314347 - AluSg/x SINE Alu -66 244 123 938 166 17 6 chr18 22367033 22367208 -64310340 - L1MB2 LINE L1 -9 6162 5986 2063 136 0 7 chr18 22369980 22370282 -64307266 + AluJb SINE Alu 1 300 -12 680 155 119 12 chr18 22370806 22370912 -64306636 + L1MCb LINE L1 1009 1141 -4904 1536 170 33 7 chr18 22370912 22371188 -64306360 + AluJo SINE Alu 26 308 -4 680 155 119 12 chr18 22371188 22371249 -64306299 + L1MCb LINE L1 1141 1194 -4851 2256 113 3 0 chr18 22371286 22371587 -64305961 - AluSq SINE Alu -11 302 1 25 0 0 0 chr18 22371589 22371614 -64305934 + AT_rich Low_complexity Low_complexity 1 25 0 1470 212 58 34 chr18 22371614 22372088 -64305460 + L1MCb LINE L1 1421 2095 -4650 24 53 0 0 chr18 22372088 22372126 -64305422 + AT_rich Low_complexity Low_complexity 1 38 0 2301 98 20 0 chr18 22372140 22372445 -64305103 + AluSq SINE Alu 1 311 -2 609 149 30 37 chr18 22372467 22372601 -64304947 + L1MA4 LINE L1 3470 3602 -3963 * 3730 147 49 14 chr18 22372589 22373136 -64304412 + L1MA4 LINE L1 4502 5083 -2482 2239 113 77 14 chr18 22373136 22373489 -64304059 - THE1C LTR MaLR 0 375 1 3730 147 49 14 chr18 22373489 22373670 -64303878 + L1MA4 LINE L1 5083 5256 -2309 2112 193 75 2 chr18 22373672 22374098 -64303450 - LTR32 LTR ERVL 0 471 15 7592 160 66 10 chr18 22374098 22375668 -64301880 + L1MA4 LINE L1 5254 6922 -743 2030 154 16 0 chr18 22375668 22375973 -64301575 + AluSx SINE Alu 1 310 -2 234 0 0 0 chr18 22376131 22376157 -64301391 + (A)n Simple_repeat Simple_repeat 1 26 0 553 177 82 116 chr18 22376167 22376245 -64301303 + L1MA4 LINE L1 7494 7573 -146 2035 150 0 3 chr18 22376245 22376558 -64300990 + AluSx SINE Alu 1 312 0 553 177 82 116 chr18 22376558 22376711 -64300837 + L1MA4 LINE L1 7573 7717 -2 2433 190 11 44 chr18 22376721 22376757 -64300791 + L1MC2 LINE L1 5818 5854 -490 1981 119 28 0 chr18 22376757 22377043 -64300505 + AluSc SINE Alu 1 294 -15 2433 190 11 44 chr18 22377043 22377526 -64300022 + L1MC2 LINE L1 5854 6320 -24 3888 170 27 52 chr18 22377535 22378348 -64299200 - Tigger6a DNA MER2_type -276 807 15 348 209 141 34 chr18 22378358 22378618 -64298930 - L1MCa LINE L1 -3947 2479 2194 45387 35 3 1 chr18 22378646 22384787 -64292761 - L1PA4 LINE L1 -3 6152 2 317 286 125 68 chr18 22384792 22384948 -64292600 - L1MCa LINE L1 -4371 2236 2090 2499 82 0 0 chr18 22384948 22385251 -64292297 - AluY SINE Alu -8 303 1 317 286 125 68 chr18 22385251 22385374 -64292174 - L1MCa LINE L1 -4517 2090 1941 1001 281 68 94 chr18 22385394 22385478 -64292070 - L2 LINE L2 -540 2774 2689 1450 212 3 23 chr18 22385478 22385818 -64291730 + AluJo SINE Alu 1 312 0 1001 281 68 94 chr18 22385818 22385925 -64291623 - L2 LINE L2 -625 2689 2581 2070 111 24 0 chr18 22385925 22386213 -64291335 + AluSq SINE Alu 1 295 -18 1001 281 68 94 chr18 22386213 22386582 -64290966 - L2 LINE L2 -733 2581 2228 429 200 118 7 chr18 22386594 22386729 -64290819 - MER69 DNA AcHobo 0 2526 2377 821 301 26 0 chr18 22386914 22387183 -64290365 + L1ME3A LINE L1 5558 5833 -337 1308 206 73 53 chr18 22387188 22387601 -64289947 + L1M4c LINE L1 1268 1688 -4696 716 130 0 68 chr18 22387603 22387749 -64289799 - L1M4 LINE L1 -386 5798 5663 1878 240 136 75 chr18 22387778 22387908 -64289640 - MER21B LTR ERV1 -52 811 690 1839 114 0 0 chr18 22387908 22388154 -64289394 + AluSg SINE Alu 49 294 -16 1878 240 136 75 chr18 22388154 22388782 -64288766 - MER21B LTR ERV1 -173 690 7 471 184 23 0 chr18 22388791 22388878 -64288670 - L1M4 LINE L1 -518 5666 5578 * 1573 151 3 45 chr18 22388871 22388924 -64288624 + L1MB7 LINE L1 5885 5939 -245 2047 112 35 0 chr18 22388924 22389209 -64288339 + AluSg SINE Alu 1 295 -15 1573 151 3 45 chr18 22389209 22389447 -64288101 + L1MB7 LINE L1 5939 6164 -20 2008 111 38 7 chr18 22389751 22390039 -64287509 - AluSx SINE Alu -15 297 1 1020 199 106 79 chr18 22390057 22390431 -64287117 - L1MC5 LINE L1 -950 7011 6618 1575 203 3 26 chr18 22390431 22390741 -64286807 - AluJo SINE Alu -7 305 3 1020 199 106 79 chr18 22390741 22390807 -64286741 - L1MC5 LINE L1 -1343 6618 6555 2164 111 7 3 chr18 22390829 22391126 -64286422 - AluSq SINE Alu -15 298 1 22 56 0 0 chr18 22391153 22391189 -64286359 + AT_rich Low_complexity Low_complexity 1 36 0 31 68 0 0 chr18 22391377 22391436 -64286112 + AT_rich Low_complexity Low_complexity 1 59 0 969 111 5 106 chr18 22391801 22391990 -64285558 - AluJ SINE Alu -18 294 125 201 173 58 0 chr18 22391990 22392042 -64285506 + (TA)n Simple_repeat Simple_repeat 1 55 0 800 165 8 8 chr18 22392042 22392169 -64285379 - AluJ SINE Alu -183 129 3 285 358 168 0 chr18 22393071 22393250 -64284298 - MIR SINE MIR -1 261 53 253 274 0 0 chr18 22393254 22393316 -64284232 + CT-rich Low_complexity Low_complexity 3 64 0 876 207 6 24 chr18 22393791 22393960 -64283588 - FRAM SINE Alu 0 166 1 235 274 0 16 chr18 22394205 22394267 -64283281 - MIR SINE MIR -200 62 2 2037 230 58 11 chr18 22394351 22394904 -64282644 - MER69B DNA AcHobo 0 1226 648 225 0 0 0 chr18 22394905 22394930 -64282618 + (T)n Simple_repeat Simple_repeat 1 25 0 2629 65 0 0 chr18 22395053 22395363 -64282185 - AluY SINE Alu -1 310 1 800 159 0 35 chr18 22395402 22395547 -64282001 - FLAM_C SINE Alu -3 140 1 1747 245 87 9 chr18 22395548 22396009 -64281539 - MER69B DNA AcHobo -102 75 107 1880 157 0 22 chr18 22396009 22396322 -64281226 + AluJo SINE Alu 1 306 -6 1747 245 87 9 chr18 22396322 22396432 -64281116 - MER69B DNA AcHobo -69 108 8 2356 110 131 8 chr18 22396772 22397153 -64280395 + MSTA LTR MaLR 1 428 0 238 279 31 44 chr18 22397926 22398111 -64279437 + MIR3 SINE MIR 3 185 -58 1775 152 0 33 chr18 22398281 22398583 -64278965 - AluJo SINE Alu -20 292 1 517 270 7 34 chr18 22398584 22398732 -64278816 + L2 LINE L2 3161 3304 -9 288 211 62 70 chr18 22398817 22398945 -64278603 - MIR SINE MIR 0 262 136 2140 134 0 0 chr18 22398959 22399265 -64278283 - AluJo SINE Alu -1 311 6 815 246 11 0 chr18 22399361 22399544 -64278004 + AluJb SINE Alu 126 310 -2 1769 119 0 8 chr18 22401381 22401632 -64275916 + AluSx SINE Alu 42 290 -22 27 0 0 0 chr18 22401833 22401860 -64275688 + AT_rich Low_complexity Low_complexity 1 27 0 1789 149 7 40 chr18 22401860 22402161 -64275387 - AluJo SINE Alu -21 291 1 1764 152 0 90 chr18 22404035 22404378 -64273170 + AluJb SINE Alu 1 312 0 27 0 0 0 chr18 22404515 22404542 -64273006 + AT_rich Low_complexity Low_complexity 1 27 0 207 114 0 0 chr18 22404549 22404584 -64272964 + (TCTCTG)n Simple_repeat Simple_repeat 2 36 0 2438 86 0 0 chr18 22405410 22405712 -64271836 - AluSx SINE Alu -10 302 1 2158 110 10 0 chr18 22405961 22406260 -64271288 + AluSq SINE Alu 1 302 -11 397 231 29 10 chr18 22406298 22406402 -64271146 - MIR SINE MIR -69 193 88 210 171 0 0 chr18 22406474 22406515 -64271033 + L2 LINE L2 3272 3312 -1 356 221 159 0 chr18 22406664 22406777 -64270771 - MER94 DNA DNA -2 132 2 216 306 40 57 chr18 22407167 22407291 -64270257 + MIR SINE MIR 56 177 -85 207 0 0 0 chr18 22407726 22407749 -64269799 + (T)n Simple_repeat Simple_repeat 1 23 0 342 233 78 9 chr18 22408194 22408310 -64269238 - MIR SINE MIR -7 255 132 2876 19 0 0 chr18 22409077 22409394 -64268154 + AluYb8 SINE Alu 1 317 -1 1439 91 0 0 chr18 22409683 22409869 -64267679 + L1PA8 LINE L1 5987 6172 0 24 85 0 0 chr18 22411562 22411621 -64265927 + AT_rich Low_complexity Low_complexity 1 59 0 860 257 34 11 chr18 22411928 22412193 -64265355 + L1ME LINE L1 5335 5605 -557 1655 152 65 4 chr18 22412258 22412535 -64265013 + AluJo SINE Alu 3 296 -16 1888 110 20 0 chr18 22412637 22412891 -64264657 - AluSx SINE Alu -53 259 1 2297 85 14 3 chr18 22412964 22413259 -64264289 - AluSc SINE Alu -9 300 3 1758 203 16 68 chr18 22413308 22413670 -64263878 + L1MC2 LINE L1 4843 5172 -974 633 161 110 0 chr18 22413670 22413788 -64263760 + FLAM_C SINE Alu 3 133 0 1758 203 16 68 chr18 22413788 22413937 -64263611 + L1MC2 LINE L1 5172 5327 -819 2282 121 0 0 chr18 22413937 22414242 -64263306 + AluSx SINE Alu 1 305 -7 189 0 0 0 chr18 22414289 22414310 -64263238 + (T)n Simple_repeat Simple_repeat 1 21 0 2226 172 52 57 chr18 22414444 22414948 -64262600 + L1MC2 LINE L1 5292 5794 -550 855 67 29 0 chr18 22414948 22415052 -64262496 + U6 snRNA snRNA 1 107 0 2226 172 52 57 chr18 22415052 22415127 -64262421 + L1MC2 LINE L1 5794 5868 -476 2477 80 3 3 chr18 22415286 22415599 -64261949 + AluSq SINE Alu 1 313 0 1030 139 37 32 chr18 22415699 22415886 -64261662 - AluJb SINE Alu -91 221 34 363 157 0 14 chr18 22415891 22415961 -64261587 - L1M4 LINE L1 -1483 4663 4595 1143 157 6 0 chr18 22416023 22416201 -64261347 + FRAM SINE Alu 1 176 0 1819 199 86 43 chr18 22416268 22416423 -64261125 + L1ME LINE L1 5122 5269 -897 1948 149 0 13 chr18 22416423 22416731 -64260817 + AluSx SINE Alu 1 304 -8 1819 199 86 43 chr18 22416731 22417227 -64260321 + L1ME LINE L1 5269 5806 -360 1061 80 22 0 chr18 22417324 22417462 -64260086 + FRAM SINE Alu 36 176 0 324 201 45 42 chr18 22417848 22417962 -64259586 + MIR SINE MIR 19 130 -78 190 264 167 0 chr18 22418068 22418140 -64259408 - L2 LINE L2 -52 3261 3178 512 206 233 0 chr18 22418549 22418695 -64258853 + MER5A DNA MER1_type 10 189 0 2120 120 10 0 chr18 22420018 22420310 -64257238 + AluSx SINE Alu 1 295 -17 315 0 0 0 chr18 22420313 22420348 -64257200 + (TG)n Simple_repeat Simple_repeat 2 36 0 1147 152 66 33 chr18 22420541 22420752 -64256796 + MER20 DNA MER1_type 1 218 -1 341 222 23 89 chr18 22420817 22420964 -64256584 - L1ME LINE L1 -313 5809 5675 696 280 26 16 chr18 22421038 22421227 -64256321 + Charlie1a DNA MER1_type 1 191 -1264 1525 198 111 61 chr18 22421233 22421709 -64255839 + L1MC4a LINE L1 7309 7808 0 198 0 0 0 chr18 22421904 22421926 -64255622 + (A)n Simple_repeat Simple_repeat 1 22 0 696 275 167 14 chr18 22422409 22422762 -64254786 + L1MC4a LINE L1 5515 5921 -1887 680 181 0 8 chr18 22422943 22423070 -64254478 + FLAM_C SINE Alu 2 127 -6 193 54 0 54 chr18 22424464 22424501 -64253047 + (CCG)n Simple_repeat Simple_repeat 1 35 0 15284 114 19 128 chr18 22424854 22428120 -64249428 - L1P LINE L1 -3227 2919 12 356 198 11 55 chr18 22428127 22428218 -64249330 + L1ME LINE L1 5580 5666 -500 1108 101 24 6 chr18 22428218 22428386 -64249162 + HSMAR2 DNA Mariner 1 171 -1131 2202 130 0 0 chr18 22428386 22428693 -64248855 + AluSx SINE Alu 1 307 -5 353 115 0 16 chr18 22428693 22428754 -64248794 + (GA)n Simple_repeat Simple_repeat 1 60 0 1807 118 15 70 chr18 22428757 22428810 -64248738 + HSMAR2 DNA Mariner 159 213 -1089 2413 77 3 0 chr18 22428810 22429109 -64248439 + AluY SINE Alu 1 300 -11 1807 118 15 70 chr18 22429109 22429256 -64248292 + HSMAR2 DNA Mariner 213 337 -965 1901 118 15 0 chr18 22429256 22429519 -64248029 + AluSp SINE Alu 44 310 -3 1807 118 15 70 chr18 22429519 22429647 -64247901 + HSMAR2 DNA Mariner 337 470 -832 1043 202 0 52 chr18 22429647 22429895 -64247653 + AluJo SINE Alu 1 235 -77 3855 128 42 13 chr18 22429908 22430508 -64247040 + HSMAR2 DNA Mariner 465 1081 -221 1563 171 7 7 chr18 22430536 22430805 -64246743 + AluJo SINE Alu 21 289 -23 2190 118 3 0 chr18 22430813 22431100 -64246448 + AluSq SINE Alu 1 288 -25 1537 190 16 33 chr18 22431125 22431430 -64246118 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr18 22432386 22432408 -64245140 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 26 0 0 0 chr18 22432843 22432869 -64244679 + AT_rich Low_complexity Low_complexity 1 26 0 282 239 128 43 chr18 22433534 22433651 -64243897 - L1MC5 LINE L1 -127 7834 7708 1973 125 10 14 chr18 22433652 22433789 -64243759 + AluSx SINE Alu 1 137 -175 2398 90 0 6 chr18 22433789 22434100 -64243448 + AluSx SINE Alu 1 309 -3 1973 125 10 14 chr18 22434100 22434257 -64243291 + AluSx SINE Alu 137 294 -18 257 246 58 0 chr18 22434295 22434364 -64243184 - MER112 DNA MER1_type -98 162 90 2062 121 0 4 chr18 22434367 22434647 -64242901 + AluSg SINE Alu 1 279 -31 495 321 57 5 chr18 22435069 22435262 -64242286 + MIR SINE MIR 15 217 -45 1325 82 0 0 chr18 22435294 22435453 -64242095 + AluSg SINE Alu 1 159 -151 213 39 0 0 chr18 22435571 22435597 -64241951 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2348 143 57 2 chr18 22435624 22436030 -64241518 + MSTC LTR MaLR 1 428 0 407 205 12 0 chr18 22436291 22436374 -64241174 - MLT1A1 LTR MaLR 0 365 282 411 159 58 0 chr18 22436392 22436461 -64241087 - MLT1A1 LTR MaLR -213 152 80 1409 99 28 14 chr18 22436505 22436717 -64240831 - AluSg/x SINE Alu -3 309 95 568 240 0 0 chr18 22436722 22436826 -64240722 - FAM SINE Alu -55 130 27 785 202 39 0 chr18 22436837 22437015 -64240533 - L1MB8 LINE L1 -12 6166 5982 947 127 0 8 chr18 22437075 22437209 -64240339 - FLAM_C SINE Alu -10 133 1 439 141 0 14 chr18 22437209 22437280 -64240268 - MLT1A1 LTR MaLR -295 70 1 560 124 226 0 chr18 22437419 22437556 -64239992 + L1MB8 LINE L1 6010 6177 -1 2160 121 3 0 chr18 22437761 22438050 -64239498 + AluSx SINE Alu 1 290 -22 531 149 35 26 chr18 22438051 22438165 -64239383 - L1MA7 LINE L1 -2 6289 6175 922 184 34 58 chr18 22438274 22438480 -64239068 + MLT1A2 LTR MaLR 1 201 -173 636 100 0 0 chr18 22438480 22438570 -64238978 - L1MA8 LINE L1 -173 6118 6029 442 149 0 0 chr18 22438570 22438637 -64238911 - AluJ/FLAM SINE Alu -241 71 5 23 0 0 0 chr18 22438645 22438668 -64238880 + AT_rich Low_complexity Low_complexity 1 23 0 2326 102 3 0 chr18 22438885 22439189 -64238359 + AluY SINE Alu 1 305 -6 204 286 34 88 chr18 22439190 22439337 -64238211 - MIR3 SINE MIR -59 149 11 2171 118 0 31 chr18 22439904 22440225 -64237323 + AluJb SINE Alu 1 311 -1 631 204 5 119 chr18 22440482 22440547 -64237001 - MER5B DNA MER1_type 0 178 107 2159 126 10 0 chr18 22440547 22440856 -64236692 + AluSx SINE Alu 1 312 0 2322 69 7 7 chr18 22440858 22441147 -64236401 + AluSp SINE Alu 1 289 -24 631 204 5 119 chr18 22441147 22441279 -64236269 - MER5B DNA MER1_type -72 106 1 984 126 0 0 chr18 22442515 22442642 -64234906 + FLAM_C SINE Alu 1 127 -16 2021 152 3 0 chr18 22443423 22443719 -64233829 - AluSx SINE Alu -15 297 1 1342 291 59 4 chr18 22444134 22444591 -64232957 + LTR16C LTR ERVL 1 482 -9 944 190 101 45 chr18 22445240 22445508 -64232040 - AluJo SINE Alu -16 286 4 362 262 131 0 chr18 22445830 22445952 -64231596 + MIR3 SINE MIR 65 202 -6 2261 112 3 0 chr18 22446221 22446533 -64231015 - AluSq SINE Alu 0 313 1 298 256 53 38 chr18 22446640 22446773 -64230775 + MIR SINE MIR 69 203 -59 2494 72 13 0 chr18 22446911 22447217 -64230331 + AluSp SINE Alu 1 310 -3 1271 70 6 0 chr18 22447217 22447374 -64230174 + AluY SINE Alu 139 296 -15 1897 132 29 32 chr18 22447822 22447960 -64229588 + AluSx SINE Alu 1 138 -174 2330 91 3 0 chr18 22447960 22448258 -64229290 + AluSg SINE Alu 1 299 -11 1897 132 29 32 chr18 22448258 22448429 -64229119 + AluSx SINE Alu 138 309 -3 2325 88 14 0 chr18 22448620 22448917 -64228631 - AluY SINE Alu -10 301 1 1543 165 12 4 chr18 22448950 22449199 -64228349 + AluJo SINE Alu 39 289 -23 2190 118 3 0 chr18 22449207 22449494 -64228054 + AluSq SINE Alu 1 288 -25 1537 190 16 33 chr18 22449519 22449824 -64227724 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr18 22450780 22450802 -64226746 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 26 0 0 0 chr18 22451237 22451263 -64226285 + AT_rich Low_complexity Low_complexity 1 26 0 282 239 128 43 chr18 22451927 22452044 -64225504 - L1MC5 LINE L1 -127 7834 7708 984 124 0 15 chr18 22452045 22452182 -64225366 + AluSq/x SINE Alu 1 135 -177 2111 134 0 3 chr18 22452182 22452480 -64225068 + AluSx SINE Alu 1 297 -15 2306 99 3 0 chr18 22452480 22452773 -64224775 + AluSp SINE Alu 1 294 -19 1967 127 18 0 chr18 22452820 22453096 -64224452 - AluSg SINE Alu -29 281 1 458 249 80 34 chr18 22453102 22453339 -64224209 - L1MC5 LINE L1 -240 7721 7474 277 188 0 31 chr18 22454174 22454238 -64223310 + MER5B DNA MER1_type 76 137 -41 1169 155 24 84 chr18 22454238 22454489 -64223059 + AluJo SINE Alu 70 305 -7 2018 129 23 3 chr18 22454489 22454791 -64222757 + AluSx SINE Alu 1 308 -4 2441 67 0 10 chr18 22455313 22455613 -64221935 + AluSc SINE Alu 1 297 -12 332 241 82 19 chr18 22455618 22455776 -64221772 - Charlie7 DNA MER1_type -5 2607 2440 1923 159 6 16 chr18 22456220 22456534 -64221014 - AluJb SINE Alu 0 312 2 630 47 24 0 chr18 22456577 22456662 -64220886 - L1MA3 LINE L1 0 6305 6219 1910 140 3 36 chr18 22456802 22457110 -64220438 + AluJb SINE Alu 1 298 -14 220 149 106 0 chr18 22457167 22457214 -64220334 - L2 LINE L2 -8 3305 3254 1166 144 0 12 chr18 22458108 22458275 -64219273 + FRAM SINE Alu 1 160 -16 2115 99 4 0 chr18 22458305 22458577 -64218971 - AluSx SINE Alu -39 273 1 2161 114 33 0 chr18 22458595 22458894 -64218654 - AluSx SINE Alu -3 309 1 1611 127 5 0 chr18 22458947 22459167 -64218381 + AluSg/x SINE Alu 81 301 -9 23 0 0 0 chr18 22459290 22459313 -64218235 + AT_rich Low_complexity Low_complexity 1 23 0 1202 162 68 101 chr18 22460230 22460300 -64217248 - AluJo SINE Alu -26 286 215 2145 101 3 36 chr18 22460300 22460608 -64216940 + AluSq SINE Alu 1 298 -15 1202 162 68 101 chr18 22460608 22460833 -64216715 - AluJo SINE Alu -97 215 1 1736 128 103 4 chr18 22461004 22461277 -64216271 + AluSx SINE Alu 1 300 -12 692 246 60 95 chr18 22461653 22462052 -64215496 + LTR67 LTR ERVL 2 386 -171 952 154 9 48 chr18 22462061 22462288 -64215260 - AluY SINE Alu -8 303 86 22 0 0 0 chr18 22462453 22462475 -64215073 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr18 22462547 22462575 -64214973 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr18 22462661 22462685 -64214863 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr18 22462784 22462809 -64214739 + (C)n Simple_repeat Simple_repeat 1 25 0 288 0 0 0 chr18 22462832 22462864 -64214684 + (A)n Simple_repeat Simple_repeat 1 32 0 1735 173 25 3 chr18 22462964 22463248 -64214300 + AluJo SINE Alu 1 290 -22 2241 114 0 3 chr18 22463823 22464129 -64213419 + AluSq SINE Alu 1 305 -8 2171 129 0 3 chr18 22464531 22464826 -64212722 + AluSg SINE Alu 1 294 -16 1502 212 45 48 chr18 22464900 22465324 -64212224 + MLT2B1 LTR ERVL 1 414 0 2046 132 7 10 chr18 22465370 22465680 -64211868 + AluSx SINE Alu 1 309 -3 373 45 0 0 chr18 22465680 22465724 -64211824 - MSTB1 LTR MaLR -388 44 1 2317 68 24 10 chr18 22465872 22466166 -64211382 - AluY SINE Alu -9 302 5 2181 121 0 10 chr18 22466167 22466473 -64211075 - AluSq SINE Alu -10 303 1 2355 80 17 7 chr18 22466603 22466902 -64210646 - AluY SINE Alu -9 302 1 963 87 56 0 chr18 22466902 22467028 -64210520 - AluSg1 SINE Alu -176 133 1 2224 53 23 0 chr18 22467752 22468017 -64209531 + AluY SINE Alu 26 296 -15 1897 132 29 32 chr18 22468465 22468603 -64208945 + AluSx SINE Alu 1 138 -174 2330 91 3 0 chr18 22468603 22468901 -64208647 + AluSg SINE Alu 1 299 -11 1897 132 29 32 chr18 22468901 22469072 -64208476 + AluSx SINE Alu 138 309 -3 2325 88 14 0 chr18 22469263 22469560 -64207988 - AluY SINE Alu -10 301 1 1561 161 12 4 chr18 22469593 22469842 -64207706 + AluJo SINE Alu 39 289 -23 2190 118 3 0 chr18 22469850 22470137 -64207411 + AluSq SINE Alu 1 288 -25 1537 190 16 33 chr18 22470162 22470467 -64207081 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr18 22471423 22471445 -64206103 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 26 0 0 0 chr18 22471880 22471906 -64205642 + AT_rich Low_complexity Low_complexity 1 26 0 261 239 128 43 chr18 22472570 22472687 -64204861 - L1MC5 LINE L1 -127 7834 7708 961 124 0 15 chr18 22472688 22472825 -64204723 + AluSq/x SINE Alu 1 135 -177 2080 134 0 3 chr18 22472825 22473123 -64204425 + AluSx SINE Alu 1 297 -15 2269 99 3 0 chr18 22473123 22473416 -64204132 + AluSp SINE Alu 1 294 -19 2043 133 17 0 chr18 22473440 22473740 -64203808 - AluSg SINE Alu -5 305 1 433 251 68 29 chr18 22473776 22473983 -64203565 - L1MC5 LINE L1 -273 7688 7474 295 188 0 31 chr18 22474818 22474882 -64202666 + MER5B DNA MER1_type 76 137 -41 1163 155 24 84 chr18 22474882 22475133 -64202415 + AluJo SINE Alu 70 305 -7 1974 129 23 3 chr18 22475133 22475435 -64202113 + AluSx SINE Alu 1 308 -4 190 293 0 0 chr18 22475435 22475476 -64202072 + MER5B DNA MER1_type 137 177 -1 2393 67 0 10 chr18 22475957 22476257 -64201291 + AluSc SINE Alu 1 297 -12 329 225 49 42 chr18 22476262 22476404 -64201144 - Charlie7 DNA MER1_type -5 2607 2465 1981 149 0 22 chr18 22476864 22477180 -64200368 - AluSx SINE Alu 0 312 4 1383 125 5 5 chr18 22477204 22477428 -64200120 + HSMAR2 DNA Mariner 1076 1299 -3 1061 205 4 25 chr18 22477428 22477468 -64200080 + L1ME1 LINE L1 5666 5705 -461 2527 55 3 0 chr18 22477468 22477775 -64199773 - AluY SINE Alu -3 308 1 1061 205 4 25 chr18 22477775 22477978 -64199570 + L1ME1 LINE L1 5705 5904 -262 443 371 54 51 chr18 22477981 22478574 -64198974 - L2 LINE L2 -61 3211 2569 200 204 56 74 chr18 22478575 22478629 -64198919 - L2 LINE L2 -865 2449 2397 1967 129 0 20 chr18 22478652 22478947 -64198601 - AluSx SINE Alu -23 289 1 320 43 22 0 chr18 22480951 22480997 -64196551 + (TG)n Simple_repeat Simple_repeat 1 47 0 4322 145 20 29 chr18 22481193 22481715 -64195833 - L1MA4 LINE L1 0 6482 5969 710 197 0 0 chr18 22481715 22481837 -64195711 - FLAM_C SINE Alu -11 122 1 4322 145 20 29 chr18 22481837 22482130 -64195418 - L1MA4 LINE L1 -513 5969 5675 23 0 0 0 chr18 22482153 22482176 -64195372 + AT_rich Low_complexity Low_complexity 1 23 0 640 187 49 0 chr18 22482177 22482300 -64195248 - FLAM_C SINE Alu -4 129 1 5454 192 43 60 chr18 22482312 22482455 -64195093 - L1MA4 LINE L1 -2550 3778 3634 414 0 0 0 chr18 22482455 22482501 -64195047 + (TA)n Simple_repeat Simple_repeat 1 46 0 5454 192 43 60 chr18 22482501 22482516 -64195032 - L1MA4 LINE L1 -2694 3634 3620 2000 117 25 3 chr18 22482516 22482798 -64194750 - AluSx SINE Alu -24 288 1 5454 192 43 60 chr18 22482798 22483218 -64194330 - L1MA4 LINE L1 -2708 3620 3194 2229 97 3 3 chr18 22483218 22483507 -64194041 - AluSp SINE Alu -23 290 2 5454 192 43 60 chr18 22483507 22484330 -64193218 - L1MA4 LINE L1 -3134 3194 2358 2278 104 0 0 chr18 22484330 22484628 -64192920 - AluSx SINE Alu -14 298 1 5454 192 43 60 chr18 22484628 22484838 -64192710 - L1MA4 LINE L1 -3970 2358 2146 1618 207 14 0 chr18 22484838 22485128 -64192420 - AluJo SINE Alu -18 294 1 2299 84 0 0 chr18 22485136 22485432 -64192116 - AluSc SINE Alu -13 296 1 5454 192 43 60 chr18 22485432 22485511 -64192037 - L1MA4 LINE L1 -4189 2139 2060 5991 111 13 55 chr18 22485511 22486507 -64191041 + LTR13 LTR ERVK 1 954 0 5454 192 43 60 chr18 22486507 22487178 -64190370 - L1MA4 LINE L1 -4268 2060 1379 2443 72 0 3 chr18 22487178 22487482 -64190066 - AluY SINE Alu -8 303 1 5454 192 43 60 chr18 22487482 22488912 -64188636 - L1MA4 LINE L1 -4949 1379 14 3336 211 14 11 chr18 22489454 22490111 -64187437 + L1ME LINE L1 3890 4552 -1594 2035 192 32 34 chr18 22490111 22490579 -64186969 - MLT1C LTR MaLR 0 467 1 3336 211 14 11 chr18 22490579 22490678 -64186870 + L1ME LINE L1 4552 4649 -1497 1097 141 0 0 chr18 22490682 22490838 -64186710 + AluSx SINE Alu 63 218 -94 248 179 95 48 chr18 22491048 22491132 -64186416 + L1ME LINE L1 5771 5858 -263 476 370 45 0 chr18 22491255 22491520 -64186028 + L1MC4a LINE L1 5549 5825 -1983 2025 104 80 0 chr18 22492009 22492296 -64185252 + AluSx SINE Alu 2 311 -1 208 208 0 38 chr18 22493488 22493541 -64184007 + (CATCC)n Simple_repeat Simple_repeat 5 55 0 185 279 139 13 chr18 22493600 22493679 -64183869 - L2 LINE L2 -6 3307 3219 2089 147 3 3 chr18 22494585 22494897 -64182651 + AluJb SINE Alu 1 312 0 1524 158 81 20 chr18 22494968 22495265 -64182283 + 7SLRNA srpRNA srpRNA 1 315 -5 30 0 0 0 chr18 22495518 22495548 -64182000 + AT_rich Low_complexity Low_complexity 1 30 0 270 0 0 0 chr18 22495556 22495586 -64181962 + (TC)n Simple_repeat Simple_repeat 2 31 0 391 304 111 59 chr18 22495646 22496070 -64181478 + HAL1b LINE L1 195 640 -708 679 95 51 0 chr18 22496380 22496538 -64181010 + (TA)n Simple_repeat Simple_repeat 1 166 0 285 264 136 44 chr18 22496623 22496873 -64180675 + L1MC4a LINE L1 6057 6329 -1479 1130 60 0 0 chr18 22497173 22497324 -64180224 - L1P LINE L1 -781 5365 5215 2726 55 8 16 chr18 22497324 22497688 -64179860 + L1PA8 LINE L1 5807 6169 -3 724 315 74 0 chr18 22497715 22497972 -64179576 + L1MC4 LINE L1 6701 6976 -1066 491 229 106 37 chr18 22497973 22498462 -64179086 + L1MC5 LINE L1 7359 7925 -36 211 250 80 34 chr18 22498463 22498551 -64178997 - L2 LINE L2 -937 2377 2286 21 36 0 0 chr18 22498796 22498824 -64178724 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr18 22499006 22499037 -64178511 + AT_rich Low_complexity Low_complexity 1 31 0 327 244 293 6 chr18 22501095 22501286 -64176262 - L1MC5 LINE L1 -5 8037 7709 231 108 0 0 chr18 22501444 22501481 -64176067 - L1MA3 LINE L1 0 6305 6269 26 0 0 0 chr18 22502104 22502130 -64175418 + AT_rich Low_complexity Low_complexity 1 26 0 573 270 63 90 chr18 22502153 22502598 -64174950 - HAL1 LINE L1 -38 2469 2037 520 234 104 19 chr18 22502599 22502753 -64174795 - L1ME2 LINE L1 -1 6163 5997 1518 265 120 22 chr18 22502779 22503495 -64174053 - HAL1 LINE L1 -475 2032 1247 391 274 32 0 chr18 22503736 22503831 -64173717 - HAL1 LINE L1 -1600 907 810 232 314 118 24 chr18 22503837 22504006 -64173542 - HAL1 LINE L1 -1658 849 665 455 250 56 39 chr18 22504197 22504377 -64173171 - HAL1 LINE L1 -2316 191 9 216 0 0 0 chr18 22506118 22506142 -64171406 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 1980 132 0 0 chr18 22506142 22506422 -64171126 - AluSx SINE Alu -27 285 6 1952 148 6 3 chr18 22507007 22507318 -64170230 - AluSx SINE Alu 0 312 1 1850 176 10 3 chr18 22507321 22507617 -64169931 - AluJo SINE Alu -14 298 1 2336 81 7 10 chr18 22507727 22508036 -64169512 - AluY SINE Alu -3 308 1 1543 216 0 7 chr18 22508264 22508551 -64168997 + AluJb SINE Alu 1 285 -27 940 230 24 19 chr18 22508655 22508868 -64168680 + MER20 DNA MER1_type 1 214 -5 761 188 78 35 chr18 22508951 22509207 -64168341 - L1MC5 LINE L1 -36 7925 7659 930 199 52 19 chr18 22509390 22509601 -64167947 + MER58A DNA MER1_type 4 221 -3 7854 210 45 24 chr18 22510135 22513031 -64164517 + L1MB3 LINE L1 3237 6182 -1 441 323 151 40 chr18 22513055 22513818 -64163730 - L2 LINE L2 -8 3264 2358 22 35 0 0 chr18 22514088 22514117 -64163431 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr18 22514139 22514167 -64163381 + AT_rich Low_complexity Low_complexity 1 28 0 689 232 14 0 chr18 22515555 22515693 -64161855 + FRAM SINE Alu 3 142 -34 2140 108 0 3 chr18 22515694 22515990 -64161558 - AluSx SINE Alu -17 295 1 207 0 0 0 chr18 22516010 22516033 -64161515 + (CAA)n Simple_repeat Simple_repeat 2 24 0 573 96 0 0 chr18 22516128 22516222 -64161326 + (TA)n Simple_repeat Simple_repeat 1 94 0 1484 158 36 82 chr18 22516293 22516597 -64160951 - AluJo SINE Alu -20 292 3 204 40 0 0 chr18 22518268 22518293 -64159255 + (T)n Simple_repeat Simple_repeat 1 25 0 1960 114 18 7 chr18 22518622 22518903 -64158645 + AluSq SINE Alu 1 284 -29 744 181 114 0 chr18 22518925 22519074 -64158474 - MLT1H LTR MaLR -323 226 61 242 324 222 5 chr18 22519255 22519386 -64158162 + MIR SINE MIR 28 129 -133 1734 157 77 4 chr18 22519386 22519660 -64157888 + AluSx SINE Alu 1 294 -18 242 324 222 5 chr18 22519660 22519713 -64157835 + MIR SINE MIR 129 252 -10 1841 125 0 96 chr18 22519719 22520054 -64157494 + AluSx SINE Alu 1 303 -9 2247 97 0 3 chr18 22520113 22520413 -64157135 + AluSx SINE Alu 1 299 -13 2099 133 0 3 chr18 22520919 22521219 -64156329 + AluSp SINE Alu 1 299 -14 414 296 73 26 chr18 22521389 22521622 -64155926 + L1MC4a LINE L1 5669 5912 -1896 1892 161 0 29 chr18 22521819 22522135 -64155413 + AluJo SINE Alu 1 307 -5 1102 175 0 74 chr18 22522167 22522396 -64155152 - AluSx SINE Alu -100 212 1 601 249 98 25 chr18 22523068 22523269 -64154279 + MLT1F LTR MaLR 54 265 -290 744 240 44 10 chr18 22523456 22523660 -64153888 + L1PB1 LINE L1 6 216 -6647 * 9693 107 52 12 chr18 22523637 22525067 -64152481 + L1PB1 LINE L1 1392 2887 -3976 2305 75 0 3 chr18 22525067 22525359 -64152189 + AluY SINE Alu 1 291 -20 9693 107 52 12 chr18 22525359 22525448 -64152100 + L1PB1 LINE L1 2887 2971 -3892 6493 130 13 4 chr18 22525451 22526894 -64150654 + L1PB1 LINE L1 5406 6864 -3 642 228 106 32 chr18 22526942 22527188 -64150360 + MLT1F LTR MaLR 278 541 -1 1279 190 56 21 chr18 22527276 22527416 -64150132 + AluJo SINE Alu 1 135 -177 2134 91 49 0 chr18 22527416 22527701 -64149847 + AluSp SINE Alu 1 299 -14 1279 190 56 21 chr18 22527701 22527844 -64149704 + AluJo SINE Alu 135 294 -18 23 0 0 0 chr18 22527870 22527893 -64149655 + AT_rich Low_complexity Low_complexity 1 23 0 1774 126 0 46 chr18 22527952 22528237 -64149311 - AluSc SINE Alu -21 288 17 2268 103 0 0 chr18 22528241 22528531 -64149017 - AluSc SINE Alu -19 290 1 479 113 35 43 chr18 22528531 22528672 -64148876 + CT-rich Low_complexity Low_complexity 3 142 0 981 143 0 0 chr18 22528682 22528815 -64148733 - FLAM_C SINE Alu 0 133 1 722 270 130 43 chr18 22530270 22530640 -64146908 - MLT1J LTR MaLR 0 511 110 24 53 0 0 chr18 22530840 22530878 -64146670 + AT_rich Low_complexity Low_complexity 1 38 0 2519 33 7 7 chr18 22531067 22531369 -64146179 - AluY SINE Alu -9 302 1 2223 105 0 13 chr18 22531379 22531684 -64145864 - AluSg SINE Alu -9 301 1 357 125 0 0 chr18 22531691 22531747 -64145801 - L1MB8 LINE L1 -11 6167 6112 875 168 0 48 chr18 22531757 22531924 -64145624 + FAM SINE Alu 8 166 -19 2938 158 104 31 chr18 22531924 22532219 -64145329 - L1MB7 LINE L1 -56 6128 5856 2399 77 0 3 chr18 22532219 22532518 -64145030 - AluSc SINE Alu -11 298 1 2938 158 104 31 chr18 22532518 22532856 -64144692 - L1MB7 LINE L1 -328 5856 5449 332 314 57 16 chr18 22533055 22533179 -64144369 + L2 LINE L2 3138 3266 -6 188 33 0 33 chr18 22533394 22533424 -64144124 + (GGGTG)n Simple_repeat Simple_repeat 3 31 0 2191 89 0 7 chr18 22533490 22533772 -64143776 - AluSg SINE Alu -30 280 1 262 246 58 0 chr18 22533775 22533844 -64143704 + MER112 DNA MER1_type 90 162 -98 2073 120 3 0 chr18 22533882 22534173 -64143375 - AluSx SINE Alu -18 294 3 2266 113 34 13 chr18 22634397 22634777 -64042771 + L1MA1 LINE L1 5915 6302 0 339 244 0 0 chr18 22634792 22634882 -64042666 - L1PB4 LINE L1 -7 6149 6060 9964 147 18 22 chr18 22634918 22636747 -64040801 + L1P LINE L1 1 1821 -4325 841 219 46 62 chr18 22637234 22637458 -64040090 - MER33 DNA MER1_type -2284 301 82 1865 189 38 53 chr18 22637458 22637908 -64039640 - LTR47B LTR ERVL 0 443 1 841 219 46 62 chr18 22637908 22637989 -64039559 - MER33 DNA MER1_type -2503 82 1 360 64 0 0 chr18 22638849 22638896 -64038652 + (TG)n Simple_repeat Simple_repeat 2 48 0 734 176 0 0 chr18 22638903 22639022 -64038526 - FLAM_A SINE Alu -14 119 1 333 366 9 0 chr18 22639180 22639292 -64038256 + MIR SINE MIR 34 146 -116 820 290 75 40 chr18 22639927 22640379 -64037169 - MLT1K LTR MaLR -97 491 24 25 75 0 0 chr18 22640672 22640725 -64036823 + AT_rich Low_complexity Low_complexity 1 53 0 30 0 0 0 chr18 22641055 22641085 -64036463 + AT_rich Low_complexity Low_complexity 1 30 0 1446 198 19 22 chr18 22641260 22641271 -64036277 + L1MC1 LINE L1 6004 6014 -319 2307 107 0 10 chr18 22641271 22641580 -64035968 - AluSx SINE Alu -6 306 1 1446 198 19 22 chr18 22641580 22641887 -64035661 + L1MC1 LINE L1 6014 6321 -12 286 245 39 10 chr18 22642090 22642192 -64035356 + L1MD1 LINE L1 4626 4730 -1416 2235 86 13 0 chr18 22642327 22642640 -64034908 - L1P LINE L1 -1861 4285 3969 * 8975 89 30 9 chr18 22642638 22644028 -64033520 + L1P LINE L1 2544 3963 -2183 212 348 102 0 chr18 22644032 22644150 -64033398 - MIR SINE MIR -108 154 25 1110 124 0 18 chr18 22744754 22744923 -63932625 - AluSg/x SINE Alu 0 310 145 4139 198 73 14 chr18 22744938 22745144 -63932404 + L1MD1 LINE L1 4723 4915 -1327 183 42 0 0 chr18 22745144 22745168 -63932380 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 4139 198 73 14 chr18 22745168 22746300 -63931248 + L1MD1 LINE L1 4915 6147 -95 305 143 36 36 chr18 22746310 22746394 -63931154 + L1M4 LINE L1 4637 4720 -1426 476 157 67 0 chr18 22746403 22746492 -63931056 + L1MD1 LINE L1 6147 6241 -1 2351 88 3 0 chr18 22746500 22746795 -63930753 + AluSp SINE Alu 1 296 -17 1887 159 3 3 chr18 22747171 22747472 -63930076 + AluJb SINE Alu 1 301 -11 429 275 61 15 chr18 22748159 22748290 -63929258 + L2 LINE L2 3136 3272 0 491 259 66 7 chr18 22748306 22748502 -63929046 - MIR SINE MIR -24 238 28 1319 132 44 0 chr18 22749017 22749222 -63928326 - AluJo SINE Alu -8 304 91 3943 154 24 50 chr18 22749272 22749486 -63928062 + L1MB3 LINE L1 5407 5625 -558 2460 84 0 0 chr18 22749486 22749784 -63927764 + AluSc SINE Alu 1 298 -11 2167 122 0 37 chr18 22749793 22750114 -63927434 + AluSx SINE Alu 1 309 -3 3943 154 24 50 chr18 22750114 22750686 -63926862 + L1MB3 LINE L1 5633 6182 -1 300 191 16 0 chr18 22750703 22750766 -63926782 - MIR SINE MIR -26 236 173 849 154 128 0 chr18 22751151 22751300 -63926248 + FRAM SINE Alu 1 163 -13 375 23 0 0 chr18 22751308 22751352 -63926196 + (TG)n Simple_repeat Simple_repeat 1 44 0 257 393 21 17 chr18 22751464 22751703 -63925845 + L2 LINE L2 2850 3089 -183 233 206 37 0 chr18 22751899 22752006 -63925542 + (TA)n Simple_repeat Simple_repeat 1 111 0 1900 159 3 10 chr18 22752341 22752642 -63924906 - AluJb SINE Alu -13 299 1 810 143 174 0 chr18 22752916 22753077 -63924471 - MER53 DNA DNA 0 189 1 293 286 50 29 chr18 22753113 22753253 -63924295 - MIR SINE MIR 0 262 120 2179 107 7 3 chr18 22753610 22753909 -63923639 - AluSx SINE Alu -12 300 1 1116 176 83 0 chr18 22753912 22754105 -63923443 - AluJo SINE Alu -17 295 87 2322 74 0 3 chr18 22754347 22754657 -63922891 + AluSc SINE Alu 1 309 0 632 257 17 68 chr18 22754787 22754986 -63922562 + MIR SINE MIR 9 196 -66 2214 94 23 3 chr18 22754986 22755285 -63922263 + AluSx SINE Alu 1 305 -7 632 257 17 68 chr18 22755285 22755322 -63922226 + MIR SINE MIR 196 233 -29 307 283 35 9 chr18 22755338 22755451 -63922097 - MLT1K LTR MaLR -25 563 448 285 271 68 58 chr18 22755553 22755815 -63921733 - MLT1L LTR MaLR -289 299 88 967 211 10 34 chr18 22755955 22756163 -63921385 + MLT1A1 LTR MaLR 3 205 -160 459 187 187 0 chr18 22756280 22756387 -63921161 + MLT1A1 LTR MaLR 247 373 -1 1613 108 58 0 chr18 22756404 22756644 -63920904 - AluSx SINE Alu -3 309 56 1298 129 0 0 chr18 22756645 22756816 -63920732 - AluSx SINE Alu -137 175 5 2201 136 0 0 chr18 22757321 22757631 -63919917 - AluSx SINE Alu -2 310 1 2216 167 49 61 chr18 22758051 22758559 -63918989 - MLT1D LTR MaLR -3 502 1 4050 170 45 18 chr18 22758672 22758765 -63918783 + L1MB5 LINE L1 5351 5440 -734 1777 169 82 8 chr18 22758765 22758913 -63918635 + MSTD LTR MaLR 1 137 -259 2118 132 0 3 chr18 22758913 22759208 -63918340 - AluJb SINE Alu -16 296 3 1777 169 82 8 chr18 22759208 22759426 -63918122 + MSTD LTR MaLR 137 394 -2 4050 170 45 18 chr18 22759426 22760134 -63917414 + L1MB5 LINE L1 5440 6174 0 589 149 0 83 chr18 22760222 22760343 -63917205 - FLAM_A SINE Alu -21 121 11 312 270 138 13 chr18 22760357 22760516 -63917032 - L1MC4a LINE L1 -1788 6020 5842 595 199 33 133 chr18 22760567 22760742 -63916806 - L1ME LINE L1 -3113 2967 2776 1830 137 0 4 chr18 22760742 22761004 -63916544 + AluSx SINE Alu 1 261 -51 378 0 0 0 chr18 22761008 22761050 -63916498 + (CAAA)n Simple_repeat Simple_repeat 4 45 0 595 199 33 133 chr18 22761050 22761170 -63916378 - L1ME LINE L1 -3307 2773 2697 971 122 32 6 chr18 22761284 22761440 -63916108 + MLT1B LTR MaLR 3 162 -228 2194 184 27 2 chr18 22761549 22761951 -63915597 - L1MD2 LINE L1 -300 6059 5648 2820 209 68 121 chr18 22761957 22762572 -63914976 - L1ME LINE L1 -4002 2259 1613 1911 158 3 0 chr18 22762572 22762857 -63914691 - AluSx SINE Alu -26 286 1 2820 209 68 121 chr18 22762857 22763247 -63914301 - L1ME LINE L1 -4648 1613 1204 2304 115 3 3 chr18 22763247 22763559 -63913989 - AluSx SINE Alu 0 312 1 2820 209 68 121 chr18 22763559 22764219 -63913329 - L1ME LINE L1 -5057 1204 729 13219 126 67 0 chr18 22764219 22767072 -63910476 + L1PA10 LINE L1 3279 6168 0 2820 209 68 121 chr18 22767072 22767290 -63910258 - L1ME LINE L1 -5532 729 501 495 225 7 43 chr18 22768097 22768235 -63909313 + MER5B DNA MER1_type 1 133 -45 290 323 10 0 chr18 22768270 22768369 -63909179 + L2 LINE L2 2371 2470 -844 1854 164 3 0 chr18 22768457 22768750 -63908798 - AluJb SINE Alu -18 294 1 2248 103 3 0 chr18 22769221 22769513 -63908035 + AluSq SINE Alu 1 293 -20 331 341 72 7 chr18 22769542 22769680 -63907868 + L2 LINE L2 3126 3272 0 629 251 42 11 chr18 22769995 22770186 -63907362 + MIR SINE MIR 38 234 -28 768 190 0 0 chr18 22770674 22770795 -63906753 + FLAM_A SINE Alu 4 124 -18 444 278 134 5 chr18 22771014 22771201 -63906347 - MIR SINE MIR -6 256 46 634 144 64 40 chr18 22771848 22771973 -63905575 - AluJb SINE Alu -182 130 3 1542 137 17 53 chr18 22772247 22772547 -63905001 + AluJb SINE Alu 9 297 -15 2338 107 0 0 chr18 22772582 22772881 -63904667 - AluSx SINE Alu -13 299 1 186 226 235 20 chr18 22773164 22773266 -63904282 + MER5A DNA MER1_type 43 166 -23 * 521 198 0 0 chr18 22773191 22773292 -63904256 - MER5A DNA MER1_type -80 109 9 1648 206 77 14 chr18 22773299 22773664 -63903884 - MLT1B LTR MaLR -2 388 1 258 172 0 31 chr18 22773692 22773756 -63903792 - MER33 DNA MER1_type -26 298 237 1198 185 40 4 chr18 22773785 22774034 -63903514 - MER33 DNA MER1_type -66 258 1 616 256 102 71 chr18 22774181 22774592 -63902956 + L2 LINE L2 2852 3275 -38 1848 147 0 4 chr18 22774863 22775142 -63902406 + AluSg SINE Alu 1 278 -32 1861 169 24 102 chr18 22775260 22775469 -63902079 + MLT2C2 LTR ERVL 12 236 -228 836 139 8 0 chr18 22775469 22775591 -63901957 + FLAM_C SINE Alu 1 123 -10 1861 169 24 102 chr18 22775591 22775627 -63901921 + MLT2C2 LTR ERVL 236 273 -191 1552 181 25 0 chr18 22775627 22775904 -63901644 + AluJo SINE Alu 1 284 -28 1861 169 24 102 chr18 22775904 22776148 -63901400 + MLT2C2 LTR ERVL 273 464 0 519 243 191 0 chr18 22776150 22776302 -63901246 - MER5A DNA MER1_type 0 189 9 1042 151 6 0 chr18 22776430 22776596 -63900952 + AluJb SINE Alu 135 301 -11 584 236 39 0 chr18 22776618 22776745 -63900803 - MER58B DNA MER1_type 0 341 210 1907 91 0 4 chr18 22776847 22777100 -63900448 - AluY SINE Alu -59 252 1 25 0 0 0 chr18 22777100 22777125 -63900423 + AT_rich Low_complexity Low_complexity 1 25 0 558 200 8 40 chr18 22777126 22777251 -63900297 - FLAM_C SINE Alu -21 122 2 937 174 0 18 chr18 22777477 22777644 -63899904 - AluJo SINE Alu -16 296 133 315 256 22 67 chr18 22777644 22777734 -63899814 - L1MC4 LINE L1 -1343 6699 6614 767 110 0 59 chr18 22777736 22777854 -63899694 - AluJo SINE Alu -187 125 15 294 50 0 0 chr18 22777864 22777904 -63899644 + (CACAA)n Simple_repeat Simple_repeat 4 43 0 216 0 0 0 chr18 22778115 22778139 -63899409 + (CA)n Simple_repeat Simple_repeat 1 24 0 1515 182 16 26 chr18 22778385 22778693 -63898855 - AluJb SINE Alu -7 305 1 301 261 0 29 chr18 22778823 22778892 -63898656 + L2 LINE L2 3206 3272 0 301 340 157 0 chr18 22779859 22780012 -63897536 + MIR SINE MIR 80 256 -6 300 296 58 46 chr18 22780138 22780269 -63897279 - L1MC4 LINE L1 -1884 5924 5787 1888 160 0 0 chr18 22780269 22780569 -63896979 + AluSx SINE Alu 5 304 -8 300 296 58 46 chr18 22780569 22780677 -63896871 - L1MC4 LINE L1 -2021 5787 5682 244 346 131 9 chr18 22780707 22780814 -63896734 + L3 LINE CR1 626 745 -832 2273 78 0 0 chr18 22781053 22781347 -63896201 + AluSx SINE Alu 2 295 -17 2400 68 0 3 chr18 22781419 22781728 -63895820 + AluY SINE Alu 1 308 -3 258 322 0 96 chr18 22781796 22781942 -63895606 - L3 LINE CR1 -619 958 827 225 335 53 33 chr18 22781975 22782127 -63895421 - L3 LINE CR1 -682 895 741 215 375 74 13 chr18 22782172 22782401 -63895147 - L2 LINE L2 -527 2787 2545 460 290 77 12 chr18 22782638 22782807 -63894741 + L3 LINE CR1 1209 1388 -189 1533 248 87 13 chr18 22783118 22783671 -63893877 + L2 LINE L2 2717 3312 -1 2022 113 3 0 chr18 22783923 22784248 -63893300 - AluSx SINE Alu 0 326 1 967 224 70 0 chr18 22784590 22784804 -63892744 + MIR SINE MIR 13 241 -21 245 220 0 0 chr18 22785014 22785064 -63892484 + L2 LINE L2 3221 3270 -2 253 229 16 104 chr18 22786133 22786249 -63891299 + L2 LINE L2 3143 3239 -74 1847 113 63 0 chr18 22786249 22786533 -63891015 - AluJo SINE Alu -10 302 1 253 229 16 104 chr18 22786533 22786599 -63890949 + L2 LINE L2 3239 3309 -4 866 154 0 0 chr18 22787078 22787221 -63890327 + FLAM_C SINE Alu 1 143 0 329 241 70 38 chr18 22787305 22787463 -63890085 - L1ME4a LINE L1 -217 5904 5742 2344 123 18 40 chr18 22787468 22787753 -63889795 - MLT1B LTR MaLR 0 390 115 1893 96 75 3 chr18 22787753 22788035 -63889513 - AluSq SINE Alu -11 302 1 2344 123 18 40 chr18 22788035 22788148 -63889400 - MLT1B LTR MaLR -275 115 1 1130 201 37 8 chr18 22788148 22788392 -63889156 - MIR SINE MIR -4 258 8 1941 128 7 3 chr18 22788480 22788770 -63888778 + AluSx SINE Alu 1 291 -21 271 263 81 20 chr18 22788772 22788871 -63888677 - L1ME4a LINE L1 -495 5626 5522 198 0 0 0 chr18 22789271 22789293 -63888255 + (CAA)n Simple_repeat Simple_repeat 2 23 0 2013 133 0 0 chr18 22789299 22789593 -63887955 + AluSx SINE Alu 1 294 -18 2110 105 0 46 chr18 22789596 22789920 -63887628 + AluSx SINE Alu 1 309 -3 2203 75 10 3 chr18 22790239 22790531 -63887017 - AluSp SINE Alu -19 294 1 836 92 0 0 chr18 22791480 22791589 -63885959 + FLAM_C SINE Alu 12 120 -23 201 39 0 0 chr18 22791589 22791615 -63885933 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1225 102 0 0 chr18 22791931 22792098 -63885450 - AluY SINE Alu -5 306 140 248 331 55 16 chr18 22793480 22793607 -63883941 - MIR SINE MIR -128 134 3 1832 133 17 33 chr18 22793958 22794260 -63883288 - AluJb SINE Alu -15 297 1 1581 147 41 51 chr18 22794323 22794637 -63882911 - AluJo SINE Alu -1 311 1 2086 117 3 0 chr18 22795042 22795341 -63882207 + AluSg SINE Alu 1 300 -10 2121 113 0 0 chr18 22796236 22796536 -63881012 + AluSx SINE Alu 1 300 -12 533 295 124 30 chr18 22796727 22796874 -63880674 + MIR SINE MIR 4 182 -80 2216 90 10 0 chr18 22796874 22797175 -63880373 + AluSx SINE Alu 1 304 -8 533 295 124 30 chr18 22797175 22797261 -63880287 + MIR SINE MIR 182 259 -3 349 291 90 26 chr18 22797481 22797670 -63879878 + MIR SINE MIR 9 209 -53 333 0 0 0 chr18 22799375 22799412 -63878136 + (TG)n Simple_repeat Simple_repeat 2 38 0 494 263 50 31 chr18 22799452 22799612 -63877936 + MIR SINE MIR 34 196 -66 333 248 263 0 chr18 22799614 22799747 -63877801 + MER5A DNA MER1_type 15 182 -7 205 238 16 48 chr18 22800253 22800316 -63877232 - MIR3 SINE MIR -6 202 142 436 216 173 7 chr18 22800352 22800491 -63877057 + MIR SINE MIR 66 227 -35 523 125 0 0 chr18 22800761 22800841 -63876707 - MADE1 DNA Mariner 0 80 1 723 290 42 0 chr18 22800841 22801058 -63876490 - MIR SINE MIR -30 232 7 316 245 238 13 chr18 22801242 22801393 -63876155 - MIR SINE MIR -32 230 46 802 94 0 8 chr18 22802111 22802336 -63875212 - AluY SINE Alu 0 311 2 1988 107 6 41 chr18 22802336 22802654 -63874894 - AluSx SINE Alu -5 307 1 243 0 0 0 chr18 22802657 22802684 -63874864 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1763 84 0 0 chr18 22802706 22802933 -63874615 - AluSx SINE Alu -85 227 1 792 136 0 0 chr18 22803773 22803891 -63873657 - FLAM_C SINE Alu -15 118 1 276 345 14 48 chr18 22804262 22804407 -63873141 - MIR SINE MIR -64 198 59 1917 110 3 11 chr18 22804873 22805179 -63872369 + AluSg SINE Alu 1 304 0 1380 108 5 15 chr18 22805424 22805627 -63871921 + AluSg/x SINE Alu 100 300 -12 394 324 7 0 chr18 22808055 22808191 -63869357 + L1MC/D LINE L1 5684 5820 -1988 2393 62 3 3 chr18 22808199 22808506 -63869042 + AluY SINE Alu 1 307 -4 535 191 0 0 chr18 22808510 22808594 -63868954 + FLAM_C SINE Alu 35 118 -25 228 256 0 49 chr18 22808640 22808722 -63868826 + L1MC/D LINE L1 5834 5911 -1897 324 0 0 0 chr18 22808727 22808763 -63868785 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1276 168 31 62 chr18 22808765 22808926 -63868622 - AluJo SINE Alu -30 282 132 1962 100 31 0 chr18 22808926 22809216 -63868332 - AluSx SINE Alu -13 299 1 1276 168 31 62 chr18 22809216 22809345 -63868203 - AluJo SINE Alu -180 132 1 2126 214 166 23 chr18 22809528 22810057 -63867491 + MLT2F LTR ERVL 3 621 -42 195 42 0 0 chr18 22810057 22810081 -63867467 + (TG)n Simple_repeat Simple_repeat 2 25 0 2126 214 166 23 chr18 22810081 22810122 -63867426 + MLT2F LTR ERVL 621 655 -8 681 249 99 50 chr18 22810197 22810657 -63866891 - MLT1H LTR MaLR 0 549 27 180 282 35 71 chr18 22810763 22810848 -63866700 + L2 LINE L2 3220 3301 -12 1002 164 0 6 chr18 22811134 22811299 -63866249 - FRAM SINE Alu -11 165 2 471 118 0 0 chr18 22811300 22811385 -63866163 + (TTTC)n Simple_repeat Simple_repeat 4 88 0 347 243 27 99 chr18 22811488 22811599 -63865949 - L1M4 LINE L1 -1142 5004 4902 1753 55 5 0 chr18 22811627 22811845 -63865703 - AluY SINE Alu -10 301 83 211 253 143 44 chr18 22812225 22812316 -63865232 - MIR3 SINE MIR -36 172 73 * 326 318 73 82 chr18 22812308 22812676 -63864872 + L2 LINE L2 2237 2601 -713 704 126 0 0 chr18 22812698 22812793 -63864755 - MER30 DNA MER1_type -1 229 135 1066 110 32 0 chr18 22812793 22812947 -63864601 + AluSg/x SINE Alu 129 287 -23 868 81 65 0 chr18 22812959 22813083 -63864465 - MER30 DNA MER1_type -96 134 3 361 362 17 17 chr18 22813087 22813264 -63864284 + L2 LINE L2 2607 2783 -531 294 337 137 0 chr18 22813394 22813489 -63864059 + L2 LINE L2 3125 3232 -40 1998 135 3 6 chr18 22813719 22814031 -63863517 + AluSx SINE Alu 1 311 -1 207 247 55 27 chr18 22814189 22814262 -63863286 + L2 LINE L2 2344 2418 -896 200 333 0 0 chr18 22814440 22814497 -63863051 + (TG)n Simple_repeat Simple_repeat 2 58 0 192 209 134 15 chr18 22814497 22814564 -63862984 + L2 LINE L2 2969 3043 -229 277 264 25 91 chr18 22814626 22814747 -63862801 + L2 LINE L2 3151 3263 -9 2234 80 0 19 chr18 22814872 22815186 -63862362 - AluY SINE Alu 0 311 4 1907 138 7 3 chr18 22815190 22815486 -63862062 - AluSx SINE Alu -15 297 1 393 65 16 32 chr18 22815931 22815993 -63861555 + U7 snRNA snRNA 2 62 -1 217 246 0 0 chr18 22815998 22816055 -63861493 + A-rich Low_complexity Low_complexity 1 57 0 407 68 17 0 chr18 22817763 22817822 -63859726 + (GA)n Simple_repeat Simple_repeat 1 60 0 604 304 40 0 chr18 22818579 22818727 -63858821 + MIR SINE MIR 38 191 -71 231 295 115 0 chr18 22819213 22819291 -63858257 + L2 LINE L2 3169 3255 -58 569 290 12 6 chr18 22819317 22819479 -63858069 - MIR SINE MIR -19 243 81 226 341 92 12 chr18 22819585 22819749 -63857799 - MIR SINE MIR -12 250 74 1846 123 25 4 chr18 22819762 22820039 -63857509 + AluSx SINE Alu 1 283 -29 242 253 36 24 chr18 22820830 22820913 -63856635 + MIR SINE MIR 82 165 -97 474 191 0 0 chr18 22821296 22821380 -63856168 + AluJ/FLAM SINE Alu 12 95 -217 207 139 0 0 chr18 22821435 22821471 -63856077 + (CATATA)n Simple_repeat Simple_repeat 5 40 0 819 156 7 39 chr18 22822337 22822491 -63855057 + FAM SINE Alu 10 158 -27 207 0 0 0 chr18 22822491 22822514 -63855034 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 1698 156 12 40 chr18 22822551 22822685 -63854863 + AluSx SINE Alu 1 137 -175 2109 54 3 48 chr18 22822685 22823004 -63854544 + AluY SINE Alu 1 306 0 1698 156 12 40 chr18 22823004 22823189 -63854359 + AluSx SINE Alu 137 312 0 243 261 206 2 chr18 22824017 22824186 -63853362 + MIR SINE MIR 7 244 -18 239 157 0 129 chr18 22824441 22824511 -63853037 - MLT1H LTR MaLR -2 592 487 2640 28 3 31 chr18 22824511 22824829 -63852719 - AluY SINE Alu -12 299 1 2236 117 0 0 chr18 22824829 22825129 -63852419 - AluSg SINE Alu -10 300 1 736 209 0 14 chr18 22825129 22825277 -63852271 - FRAM SINE Alu -30 146 1 1108 263 105 33 chr18 22825278 22825735 -63851813 - MLT1H LTR MaLR -55 494 5 234 254 167 22 chr18 22825739 22825877 -63851671 - MLT1H-int LTR MaLR 0 1371 1214 2111 143 0 10 chr18 22825971 22826285 -63851263 + AluSx SINE Alu 1 311 -1 1965 110 24 14 chr18 22826414 22826706 -63850842 - AluSp SINE Alu -18 295 1 2357 78 0 14 chr18 22827469 22827793 -63849755 + AluSq SINE Alu 1 313 0 1994 133 0 0 chr18 22827878 22828156 -63849392 + AluSx SINE Alu 14 291 -21 290 242 44 22 chr18 22828168 22828259 -63849289 - MLT1H-int LTR MaLR -1642 93 1 305 261 0 0 chr18 22828259 22828328 -63849220 - MLT1H LTR MaLR 0 549 481 680 164 0 0 chr18 22828328 22828438 -63849110 + FLAM_A SINE Alu 1 110 -32 204 40 0 0 chr18 22828445 22828470 -63849078 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1214 264 60 50 chr18 22828470 22828952 -63848596 - MLT1H LTR MaLR -62 487 1 2332 67 3 30 chr18 22829109 22829407 -63848141 - AluY SINE Alu -15 296 7 2298 116 0 3 chr18 22829915 22830225 -63847323 + AluSc SINE Alu 1 309 0 866 231 5 19 chr18 22830944 22831156 -63846392 + MIR SINE MIR 8 216 -46 743 139 90 0 chr18 22831187 22831345 -63846203 + FLAM_C SINE Alu 1 169 0 1871 143 70 0 chr18 22831354 22831641 -63845907 + AluSg SINE Alu 1 307 -3 30 27 0 0 chr18 22831808 22831845 -63845703 + AT_rich Low_complexity Low_complexity 1 37 0 2003 128 0 7 chr18 22832155 22832443 -63845105 + AluJb SINE Alu 5 290 -22 23 0 0 0 chr18 22832450 22832473 -63845075 + AT_rich Low_complexity Low_complexity 1 23 0 2128 101 10 39 chr18 22833578 22833884 -63843664 - AluSx SINE Alu -15 297 1 1010 158 0 12 chr18 22834257 22834422 -63843126 - FRAM SINE Alu -1 165 3 618 143 4 2 chr18 22834541 22834785 -63842763 + AluJo SINE Alu 1 299 -13 394 304 104 0 chr18 22835018 22835153 -63842395 + L2 LINE L2 3124 3272 0 282 236 56 11 chr18 22835339 22835428 -63842120 - L2 LINE L2 -6 3307 3215 565 202 258 66 chr18 22836336 22836534 -63841014 - MIR SINE MIR 0 262 27 2646 48 0 10 chr18 22836612 22836926 -63840622 + AluY SINE Alu 1 311 0 2417 84 0 3 chr18 22836961 22837258 -63840290 + AluSg SINE Alu 1 296 -14 1804 142 38 7 chr18 22837626 22837914 -63839634 + AluSx SINE Alu 1 297 -15 830 183 99 167 chr18 22839074 22839583 -63837965 + AluJo SINE Alu 2 488 0 442 156 55 16 chr18 22839608 22839736 -63837812 + GA-rich Low_complexity Low_complexity 3 135 0 285 250 250 9 chr18 22840506 22840622 -63836926 - MIR SINE MIR -111 151 8 1574 154 82 21 chr18 22840993 22841272 -63836276 + AluJb SINE Alu 1 296 -16 24 53 0 0 chr18 22841433 22841471 -63836077 + AT_rich Low_complexity Low_complexity 1 38 0 1693 156 48 24 chr18 22841660 22841955 -63835593 - AluSx SINE Alu 0 312 11 2121 102 0 71 chr18 22842033 22842356 -63835192 + AluSq SINE Alu 1 300 -13 1694 150 3 59 chr18 22842428 22842735 -63834813 + AluSx SINE Alu 5 294 -18 1192 205 139 53 chr18 22842759 22843271 -63834277 + L1MC5 LINE L1 6907 7462 -499 400 206 52 22 chr18 22843348 22843420 -63834128 + L1MC5 LINE L1 7605 7673 -288 2342 73 0 35 chr18 22843420 22843733 -63833815 - AluY SINE Alu -9 302 1 400 206 52 22 chr18 22843733 22843796 -63833752 + L1MC5 LINE L1 7673 7744 -217 686 155 39 23 chr18 22843867 22843996 -63833552 - FLAM_A SINE Alu -4 138 8 512 300 122 1 chr18 22844183 22844420 -63833128 + L1ME LINE L1 5512 5776 -386 2357 228 35 59 chr18 22844766 22844924 -63832624 - L1ME3A LINE L1 -83 6087 5930 878 269 31 98 chr18 22844924 22845091 -63832457 - L1MA7 LINE L1 -364 5927 5750 2053 142 0 7 chr18 22845091 22845386 -63832162 - AluSx SINE Alu -19 293 1 878 269 31 98 chr18 22845386 22845725 -63831823 - L1MA7 LINE L1 -541 5750 5390 2307 101 0 3 chr18 22845725 22846031 -63831517 - AluSx SINE Alu -7 305 1 878 269 31 98 chr18 22846031 22846123 -63831425 - L1MA7 LINE L1 -901 5390 5293 879 0 27 0 chr18 22846123 22846234 -63831314 + (TAGA)n Simple_repeat Simple_repeat 4 117 0 2141 120 3 3 chr18 22846234 22846526 -63831022 - AluSx SINE Alu -18 294 3 878 269 31 98 chr18 22846526 22846578 -63830970 - L1MA7 LINE L1 -919 5372 5318 578 250 8 0 chr18 22846609 22846729 -63830819 - FLAM_A SINE Alu -12 121 1 258 203 62 47 chr18 22846731 22846859 -63830689 - L1ME3A LINE L1 -814 5332 5203 352 203 0 0 chr18 22846859 22846923 -63830625 + L1MA4 LINE L1 4039 4102 -2044 577 91 0 216 chr18 22846930 22846977 -63830571 + L1MB1 LINE L1 5692 5747 -442 1303 181 112 35 chr18 22846977 22847264 -63830284 + AluJb SINE Alu 1 309 -3 577 91 0 216 chr18 22847264 22847329 -63830219 + L1MB1 LINE L1 5747 5755 -434 805 186 0 0 chr18 22847329 22847458 -63830090 + FLAM_A SINE Alu 4 132 -1 577 91 0 216 chr18 22847458 22847520 -63830028 + L1MB1 LINE L1 5755 5829 -360 806 181 7 0 chr18 22847541 22847679 -63829869 - FLAM_C SINE Alu -4 139 1 1547 166 61 3 chr18 22847679 22847975 -63829573 + L1MA9 LINE L1 5816 6128 -184 603 151 19 0 chr18 22847977 22848083 -63829465 - LTR54 LTR ERV1 0 510 403 6882 149 23 37 chr18 22848084 22848700 -63828848 + L1MA4 LINE L1 4092 4715 -1585 1971 143 3 10 chr18 22848700 22849008 -63828540 + AluJb SINE Alu 5 310 -2 6882 149 23 37 chr18 22849008 22850447 -63827101 + L1MA4 LINE L1 4715 6129 -171 2025 114 0 33 chr18 22850447 22850754 -63826794 + AluSx SINE Alu 1 297 -15 6882 149 23 37 chr18 22850754 22850922 -63826626 + L1MA4 LINE L1 6129 6298 -2 26 30 0 0 chr18 22851012 22851045 -63826503 + AT_rich Low_complexity Low_complexity 1 33 0 644 216 0 37 chr18 22851051 22851185 -63826363 - FLAM_A SINE Alu -1 132 4 2128 137 0 3 chr18 22851265 22851564 -63825984 - AluSx SINE Alu -14 298 1 2235 115 3 0 chr18 22852127 22852432 -63825116 + AluSx SINE Alu 1 306 -6 26 0 0 0 chr18 22852464 22852490 -63825058 + AT_rich Low_complexity Low_complexity 1 26 0 2428 98 0 3 chr18 22852565 22852871 -63824677 + AluSg SINE Alu 1 305 -5 852 183 0 0 chr18 22853477 22853614 -63823934 - FRAM SINE Alu -11 165 29 1976 150 20 7 chr18 22854580 22854886 -63822662 + AluJo SINE Alu 1 310 -2 503 128 12 0 chr18 22854922 22855008 -63822540 + GA-rich Low_complexity Low_complexity 2 88 0 207 196 137 0 chr18 22855322 22855373 -63822175 - MER5B DNA MER1_type -120 58 1 275 0 0 28 chr18 22856207 22856243 -63821305 + (TTG)n Simple_repeat Simple_repeat 2 36 0 2226 114 0 0 chr18 22856568 22856867 -63820681 + AluSg SINE Alu 1 299 -11 400 283 60 73 chr18 22857280 22857409 -63820139 + MIR SINE MIR 20 146 -116 2193 117 0 7 chr18 22857409 22857716 -63819832 + AluSq SINE Alu 1 305 -8 400 283 60 73 chr18 22857716 22857819 -63819729 + MIR SINE MIR 146 249 -13 384 103 0 0 chr18 22857875 22857933 -63819615 + (TA)n Simple_repeat Simple_repeat 2 59 0 636 209 0 0 chr18 22858512 22858622 -63818926 + FLAM_A SINE Alu 13 122 -20 1627 142 4 0 chr18 22859245 22859505 -63818043 - AluSx SINE Alu 0 311 51 463 271 31 0 chr18 22859511 22859640 -63817908 - MIR SINE MIR -74 188 56 1924 114 8 0 chr18 22860111 22860373 -63817175 + AluSx SINE Alu 26 289 -23 21 43 0 22 chr18 22861142 22861158 -63816390 + AT_rich Low_complexity Low_complexity 1 16 -29 1767 151 34 34 chr18 22861158 22861456 -63816092 + AluJb SINE Alu 1 298 -14 21 43 0 22 chr18 22861456 22861485 -63816063 + AT_rich Low_complexity Low_complexity 16 45 0 2229 117 17 0 chr18 22862071 22862370 -63815178 - AluSx SINE Alu -8 304 1 189 250 141 11 chr18 22862551 22862643 -63814905 + MIR SINE MIR 132 235 -27 324 318 75 23 chr18 22863244 22863286 -63814262 - MIR SINE MIR -67 195 157 769 144 8 8 chr18 22863286 22863411 -63814137 + FLAM_C SINE Alu 1 125 -8 324 318 75 23 chr18 22863411 22863541 -63814007 - MIR SINE MIR -105 157 14 201 94 0 0 chr18 22863665 22863697 -63813851 + (TG)n Simple_repeat Simple_repeat 1 32 0 235 229 0 0 chr18 22863859 22863907 -63813641 - L1MA9 LINE L1 0 6312 6265 1838 181 0 0 chr18 22863908 22864195 -63813353 + AluJo SINE Alu 1 287 -25 1933 137 56 0 chr18 22864221 22864505 -63813043 + AluJb SINE Alu 1 300 -12 2395 168 21 17 chr18 22864546 22864570 -63812978 - L1MA9 LINE L1 -21 6291 6269 1811 153 25 57 chr18 22864570 22864785 -63812763 - MER2 DNA MER2_type -1 343 141 1538 99 0 5 chr18 22864785 22865021 -63812527 + AluSg/x SINE Alu 83 317 0 1811 153 25 57 chr18 22865021 22865158 -63812390 - MER2 DNA MER2_type -203 141 1 2395 168 21 17 chr18 22865158 22865613 -63811935 - L1MA9 LINE L1 -43 6269 5806 247 127 182 0 chr18 22865801 22865856 -63811692 + MIR SINE MIR 111 175 -87 240 299 10 21 chr18 22866888 22866985 -63810563 + MIR SINE MIR 10 105 -157 1003 185 0 0 chr18 22867044 22867206 -63810342 - FRAM SINE Alu -3 163 2 292 243 14 0 chr18 22867208 22867278 -63810270 + MIR SINE MIR 119 189 -73 763 173 0 81 chr18 22868165 22868202 -63809346 - L1MA4 LINE L1 0 6300 6262 1810 155 30 24 chr18 22868202 22868499 -63809049 + AluJb SINE Alu 1 299 -13 763 173 0 81 chr18 22868499 22868658 -63808890 - L1MA4 LINE L1 -38 6262 6120 1472 242 61 38 chr18 22868785 22869041 -63808507 + L2 LINE L2 2446 2695 -618 2184 92 14 0 chr18 22869041 22869355 -63808193 + AluSq SINE Alu 1 318 0 1472 242 61 38 chr18 22869355 22869928 -63807620 + L2 LINE L2 2695 3290 -23 389 263 103 32 chr18 22870015 22870169 -63807379 + MIR SINE MIR 35 210 -52 2120 107 43 0 chr18 22870169 22870450 -63807098 + AluSx SINE Alu 1 293 -19 389 263 103 32 chr18 22870450 22870508 -63807040 + MIR SINE MIR 210 262 0 216 214 0 0 chr18 22870508 22870550 -63806998 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1994 140 0 29 chr18 22871186 22871501 -63806047 + AluJo SINE Alu 1 306 -6 264 59 0 0 chr18 22872419 22872453 -63805095 + (CA)n Simple_repeat Simple_repeat 2 35 0 1859 184 0 0 chr18 22872512 22872818 -63804730 + AluJo SINE Alu 1 306 0 185 263 0 35 chr18 22872819 22872876 -63804672 - L3 LINE CR1 -600 977 923 2206 108 3 0 chr18 22873395 22873682 -63803866 - AluSx SINE Alu -24 288 1 817 171 0 0 chr18 22873724 22873853 -63803695 - FLAM_C SINE Alu -4 129 1 349 305 16 16 chr18 22873918 22874046 -63803502 + MIR3 SINE MIR 74 201 -7 2130 122 0 26 chr18 22874188 22874500 -63803048 + AluSx SINE Alu 1 304 -8 2115 107 0 0 chr18 22876378 22876659 -63800889 + AluSx SINE Alu 1 281 -31 232 170 36 18 chr18 22878055 22878167 -63799381 + (TATAA)n Simple_repeat Simple_repeat 5 118 0 210 125 28 69 chr18 22878413 22878485 -63799063 + (TTATA)n Simple_repeat Simple_repeat 1 69 0 804 181 0 0 chr18 22878504 22878631 -63798917 - FLAM_C SINE Alu -15 128 2 1573 111 0 0 chr18 22878651 22878867 -63798681 + AluSg/x SINE Alu 82 297 -15 650 116 0 0 chr18 22879890 22879976 -63797572 + FLAM_C SINE Alu 31 116 -27 779 283 64 14 chr18 22880921 22881204 -63796344 + LTR33A LTR ERVL 220 516 -7 191 337 133 30 chr18 22882272 22882438 -63795110 - MIR SINE MIR -57 205 23 1792 145 40 0 chr18 22882644 22882941 -63794607 - AluJo SINE Alu -3 309 1 1993 109 28 0 chr18 22882950 22883256 -63794292 - AluSp SINE Alu 0 313 1 25 0 0 0 chr18 22883256 22883281 -63794267 + AT_rich Low_complexity Low_complexity 1 25 0 1960 134 0 3 chr18 22883281 22883571 -63793977 - AluSx SINE Alu -23 289 1 2068 103 0 0 chr18 22884087 22884358 -63793190 + AluSg SINE Alu 1 271 -39 2184 97 20 3 chr18 22885862 22886162 -63791386 + AluSq SINE Alu 1 305 -8 189 0 0 0 chr18 22886168 22886189 -63791359 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 891 129 0 0 chr18 22886290 22886422 -63791126 + AluSq/x SINE Alu 1 132 -181 2174 112 0 0 chr18 22886463 22886766 -63790782 + AluSx SINE Alu 3 305 -7 1751 155 76 48 chr18 22887239 22887380 -63790168 + MLT1A1 LTR MaLR 1 137 -228 1645 134 45 3 chr18 22887380 22887670 -63789878 + AluSx SINE Alu 1 302 -10 1751 155 76 48 chr18 22887670 22887883 -63789665 + MLT1A1 LTR MaLR 137 365 0 1620 73 5 0 chr18 22888048 22888304 -63789244 - AluSp SINE Alu 0 334 78 2270 106 0 0 chr18 22888362 22888674 -63788874 - AluSx SINE Alu 0 312 1 311 265 51 31 chr18 22888789 22888887 -63788661 + MIR3 SINE MIR 97 196 -12 1905 132 3 25 chr18 22889921 22890240 -63787308 + AluSx SINE Alu 1 312 0 2098 108 13 7 chr18 22890706 22891011 -63786537 + AluY SINE Alu 1 307 -4 1243 62 23 0 chr18 22891024 22891200 -63786348 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2160 114 3 0 chr18 22891254 22891560 -63785988 + AluSq SINE Alu 1 307 -6 252 154 19 39 chr18 22891586 22891638 -63785910 + L2 LINE L2 3263 3313 0 2135 116 3 0 chr18 22891830 22892133 -63785415 + AluSx SINE Alu 2 305 -7 3523 152 21 2 chr18 22892312 22892932 -63784616 + L1MA4 LINE L1 5665 6296 -4 1267 148 0 5 chr18 22893404 22893628 -63783920 + AluJo SINE Alu 86 308 0 190 261 22 0 chr18 22893636 22893682 -63783866 - MER5B DNA MER1_type -130 48 2 226 313 77 62 chr18 22894304 22894512 -63783036 - L2 LINE L2 -5 3267 3057 213 277 220 66 chr18 22894887 22895219 -63782329 - L2 LINE L2 -1212 2102 1720 459 329 99 5 chr18 22895321 22895534 -63782014 - MIR SINE MIR -29 233 1 235 286 43 0 chr18 22895901 22895971 -63781577 + MIR SINE MIR 188 260 -2 1622 142 60 33 chr18 22896369 22896671 -63780877 + AluSg SINE Alu 1 310 0 1593 148 48 10 chr18 22896992 22897283 -63780265 + AluJo SINE Alu 11 312 0 2262 90 3 0 chr18 22897324 22897625 -63779923 - AluSq SINE Alu -11 302 1 260 322 102 17 chr18 22897969 22898087 -63779461 - L2 LINE L2 -8 3264 3137 415 360 26 5 chr18 22898190 22898379 -63779169 - L2 LINE L2 -467 2847 2655 878 102 0 23 chr18 22898551 22898679 -63778869 + FLAM_C SINE Alu 6 130 -13 1242 90 0 0 chr18 22900595 22900806 -63776742 + (TTC)n Simple_repeat Simple_repeat 1 211 0 1572 167 0 97 chr18 22900812 22901141 -63776407 - AluJb SINE Alu -3 299 3 24 32 0 0 chr18 22901995 22902026 -63775522 + AT_rich Low_complexity Low_complexity 1 31 0 625 202 17 8 chr18 22902026 22902145 -63775403 - FLAM_A SINE Alu -12 121 2 1885 115 3 115 chr18 22902273 22902797 -63774751 - AluSx SINE Alu 0 486 1 820 177 12 6 chr18 22903267 22903431 -63774117 - AluJb SINE Alu -10 302 138 474 177 0 0 chr18 22903846 22903925 -63773623 + FLAM_A SINE Alu 18 96 -46 223 177 32 16 chr18 22903951 22904013 -63773535 + GA-rich Low_complexity Low_complexity 2 64 0 2159 68 0 0 chr18 22904183 22904448 -63773100 - AluSq SINE Alu -48 265 1 625 146 63 251 chr18 22905103 22905262 -63772286 + L2 LINE L2 2387 2506 -808 502 129 0 0 chr18 22905262 22905332 -63772216 + AluJb SINE Alu 211 280 -32 625 146 63 251 chr18 22905332 22905513 -63772035 + L2 LINE L2 2506 2719 -595 2060 112 13 19 chr18 22905513 22905862 -63771686 + AluJb SINE Alu 1 347 0 264 287 21 0 chr18 22905872 22905966 -63771582 + L2 LINE L2 2709 2804 -510 2224 120 0 0 chr18 22906547 22906856 -63770692 + AluSx SINE Alu 1 309 -3 1674 124 90 0 chr18 22908025 22908292 -63769256 + AluSx SINE Alu 1 291 -21 367 252 28 19 chr18 22908428 22908535 -63769013 + MIR SINE MIR 6 113 -149 229 227 0 0 chr18 22908550 22908594 -63768954 + MIR SINE MIR 219 262 0 772 227 55 142 chr18 22908866 22908945 -63768603 + L2 LINE L2 2467 2551 -762 825 129 0 64 chr18 22908945 22909085 -63768463 + FLAM_C SINE Alu 2 132 -1 772 227 55 142 chr18 22909085 22909780 -63767768 + L2 LINE L2 2551 3223 -90 1835 130 27 17 chr18 22909885 22910178 -63767370 - AluSx SINE Alu -16 296 1 522 83 0 0 chr18 22910189 22910261 -63767287 - AluSc SINE Alu -6 303 232 2000 94 6 72 chr18 22910283 22910614 -63766934 + AluSg SINE Alu 1 309 -1 399 323 81 50 chr18 22910760 22910936 -63766612 + HAL1 LINE L1 147 335 -2172 2132 99 27 0 chr18 22910936 22911230 -63766318 + AluSq SINE Alu 1 302 -11 399 323 81 50 chr18 22911230 22911313 -63766235 + HAL1 LINE L1 335 414 -2093 456 231 113 12 chr18 22911372 22911532 -63766016 + HAL1 LINE L1 1181 1356 -1151 1960 120 16 19 chr18 22911532 22911841 -63765707 + AluSc SINE Alu 1 308 -1 768 153 0 0 chr18 22911850 22911968 -63765580 + AluJo/FLAM SINE Alu 2 119 -193 995 156 24 14 chr18 22911968 22912179 -63765369 - AluSg/x SINE Alu -8 304 92 22 0 0 0 chr18 22912280 22912302 -63765246 + AT_rich Low_complexity Low_complexity 1 22 0 1780 286 74 31 chr18 22912317 22912948 -63764600 + HAL1 LINE L1 1363 2050 -457 2144 113 3 0 chr18 22912948 22913250 -63764298 - AluSp SINE Alu -10 303 1 1780 286 74 31 chr18 22913250 22913572 -63763976 + HAL1 LINE L1 2050 2357 -150 * 2780 249 74 101 chr18 22913569 22914810 -63762738 + L1MEc LINE L1 35 1307 -5089 1503 212 0 3 chr18 22914810 22915103 -63762445 - AluJo SINE Alu -20 292 1 2780 249 74 101 chr18 22915103 22915709 -63761839 + L1MEc LINE L1 1307 1806 -4590 2075 127 0 0 chr18 22915709 22916008 -63761540 + AluY SINE Alu 1 299 -12 2780 249 74 101 chr18 22916008 22916564 -63760984 + L1MEc LINE L1 1806 2375 -4021 407 239 107 6 chr18 22916542 22916701 -63760847 + HAL1 LINE L1 2382 2556 -20 * 699 193 0 0 chr18 22916811 22916930 -63760618 + AluJo/FLAM SINE Alu 3 121 -191 1828 142 27 0 chr18 22916931 22917226 -63760322 - AluSq SINE Alu -10 303 1 442 210 36 116 chr18 22917353 22917390 -63760158 - MER58A DNA MER1_type -214 127 89 1656 191 7 0 chr18 22917390 22917693 -63759855 + AluJo SINE Alu 1 305 -7 442 210 36 116 chr18 22917693 22917729 -63759819 - MER58A DNA MER1_type -252 89 52 1854 136 3 3 chr18 22917729 22918024 -63759524 - AluSx SINE Alu -16 296 2 442 210 36 116 chr18 22918024 22918087 -63759461 - MER58A DNA MER1_type -289 52 1 1629 113 12 4 chr18 22918278 22918534 -63759014 - AluSx SINE Alu -16 296 39 652 170 10 0 chr18 22918862 22918962 -63758586 + FLAM_A SINE Alu 12 112 -30 321 26 0 0 chr18 22918964 22919002 -63758546 + (CA)n Simple_repeat Simple_repeat 1 38 0 1647 174 14 0 chr18 22919053 22919194 -63758354 + AluJb SINE Alu 1 139 -173 2153 110 0 3 chr18 22919194 22919494 -63758054 + AluSx SINE Alu 1 299 -13 1647 174 14 0 chr18 22919494 22919646 -63757902 + AluJb SINE Alu 139 298 -14 189 0 0 0 chr18 22919856 22919877 -63757671 + (TA)n Simple_repeat Simple_repeat 2 22 0 784 154 33 82 chr18 22920653 22920835 -63756713 + L1MB3 LINE L1 5659 5831 -352 824 160 0 0 chr18 22920845 22920976 -63756572 - FLAM_C SINE Alu -12 131 1 1242 89 0 0 chr18 22921025 22921183 -63756365 + AluSq SINE Alu 4 161 -152 1114 124 51 0 chr18 22921213 22921390 -63756158 + AluSg/x SINE Alu 118 303 -7 839 212 47 18 chr18 22921933 22922103 -63755445 + FAM SINE Alu 1 175 0 716 269 127 60 chr18 22922176 22922674 -63754874 + L1ME3A LINE L1 5328 5858 -312 1558 163 32 7 chr18 22922984 22923107 -63754441 + AluJb SINE Alu 1 119 -193 279 0 0 0 chr18 22923107 22923138 -63754410 + (CAA)n Simple_repeat Simple_repeat 2 32 0 1558 163 32 7 chr18 22923138 22923296 -63754252 + AluJb SINE Alu 119 289 -23 773 152 0 24 chr18 22923688 22923813 -63753735 - FLAM_C SINE Alu -16 127 6 757 253 58 29 chr18 22923813 22924090 -63753458 - L1MC/D LINE L1 -1992 5816 5532 2104 105 3 3 chr18 22924773 22925068 -63752480 - AluSx SINE Alu -17 295 1 44 16 0 16 chr18 22925071 22925118 -63752430 + AT_rich Low_complexity Low_complexity 1 48 -13 1716 144 7 14 chr18 22925118 22925409 -63752139 - AluJb SINE Alu -23 289 1 44 16 0 16 chr18 22925409 22925423 -63752125 + AT_rich Low_complexity Low_complexity 48 61 0 742 158 0 9 chr18 22925435 22925549 -63751999 - FLAM_C SINE Alu -25 118 6 1115 134 0 0 chr18 22925565 22925736 -63751812 - L1PA16 LINE L1 -2 6164 5994 2087 111 0 3 chr18 22925978 22926276 -63751272 + AluSx SINE Alu 1 297 -15 1984 124 0 7 chr18 22926540 22926839 -63750709 + AluSx SINE Alu 1 297 -15 2351 153 9 36 chr18 22926947 22927245 -63750303 + Tigger2a DNA MER2_type 1 285 -2423 1996 124 0 26 chr18 22927245 22927552 -63749996 - AluSx SINE Alu -13 299 1 2351 153 9 36 chr18 22927552 22927699 -63749849 + Tigger2a DNA MER2_type 285 434 0 1880 157 0 0 chr18 22927812 22928106 -63749442 + AluJb SINE Alu 1 294 -18 363 296 74 39 chr18 22928167 22928370 -63749178 - MIR SINE MIR 0 262 53 197 244 0 0 chr18 22928702 22928743 -63748805 - L3b LINE CR1 0 1583 1543 737 51 10 0 chr18 22929003 22929101 -63748447 - L1PA4 LINE L1 0 6155 6057 2281 78 3 0 chr18 22929101 22929394 -63748154 - AluSc SINE Alu -15 294 1 1830 141 6 19 chr18 22929394 22929706 -63747842 - AluJb SINE Alu -4 308 1 1131 138 32 9 chr18 22929707 22929924 -63747624 - MER33 DNA MER1_type -85 239 18 212 306 105 16 chr18 22930174 22930298 -63747250 + L2 LINE L2 3179 3313 0 21 36 0 0 chr18 22931614 22931642 -63745906 + AT_rich Low_complexity Low_complexity 1 28 0 1399 185 35 0 chr18 22931644 22931903 -63745645 + AluJo SINE Alu 1 268 -44 1244 59 0 0 chr18 22932156 22932343 -63745205 + AluSg/x SINE Alu 132 318 0 2271 81 0 3 chr18 22933444 22933740 -63743808 + AluSc SINE Alu 1 295 -14 2143 96 3 0 chr18 22933997 22934290 -63743258 + AluY SINE Alu 1 294 -17 846 164 86 13 chr18 22934356 22934508 -63743040 + FAM SINE Alu 4 166 -9 4084 239 59 47 chr18 22934526 22934781 -63742767 + L1M4 LINE L1 2761 3011 -3135 2123 95 0 3 chr18 22934781 22935075 -63742473 + AluY SINE Alu 1 293 -18 4084 239 59 47 chr18 22935075 22935430 -63742118 + L1M4 LINE L1 3011 3360 -2786 2194 81 0 0 chr18 22935430 22935713 -63741835 + AluSc SINE Alu 1 283 -26 306 0 0 0 chr18 22935715 22935749 -63741799 + (CA)n Simple_repeat Simple_repeat 1 34 0 4084 239 59 47 chr18 22935749 22935810 -63741738 + L1M4 LINE L1 3360 3419 -2727 357 24 0 0 chr18 22935810 22935852 -63741696 + (CA)n Simple_repeat Simple_repeat 1 42 0 4084 239 59 47 chr18 22935852 22935911 -63741637 + L1M4 LINE L1 3419 3476 -2670 1843 159 0 10 chr18 22935911 22936225 -63741323 + AluJb SINE Alu 1 311 -1 4084 239 59 47 chr18 22936225 22936392 -63741156 + L1M4 LINE L1 3476 3640 -2506 1989 141 0 0 chr18 22936392 22936691 -63740857 - AluJb SINE Alu -13 299 1 4084 239 59 47 chr18 22936691 22937373 -63740175 + L1M4 LINE L1 3640 4417 -1729 2199 102 0 3 chr18 22937373 22937678 -63739870 + AluSg SINE Alu 1 304 -6 4084 239 59 47 chr18 22937678 22937837 -63739711 + L1M4 LINE L1 4417 4573 -1573 1900 120 6 25 chr18 22937844 22938161 -63739387 - AluSx SINE Alu -1 311 1 2190 119 0 0 chr18 22938250 22938561 -63738987 + AluSx SINE Alu 1 311 -1 1805 160 7 0 chr18 22939524 22939831 -63737717 + AluSx SINE Alu 1 309 -3 2111 117 0 0 chr18 22939948 22940247 -63737301 + AluSx SINE Alu 6 304 -8 1383 185 13 36 chr18 22940584 22940887 -63736661 - AluJb SINE Alu -12 300 5 286 225 22 79 chr18 22940938 22941027 -63736521 + MER63 DNA MER1_type 677 760 -76 2211 102 3 0 chr18 22941123 22941426 -63736122 + AluSq SINE Alu 1 304 -9 2124 94 0 11 chr18 22941744 22942052 -63735496 - AluSx SINE Alu 0 305 1 1689 155 17 10 chr18 22943097 22943394 -63734154 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr18 22943433 22943454 -63734094 + AT_rich Low_complexity Low_complexity 1 21 0 1854 131 6 41 chr18 22943623 22943937 -63733611 + AluSx SINE Alu 1 303 -9 1943 153 0 0 chr18 22944049 22944350 -63733198 - AluSx SINE Alu -11 301 1 2379 190 17 2 chr18 22944360 22944828 -63732720 - L1PB4 LINE L1 0 6156 5682 2151 105 3 0 chr18 22945028 22945322 -63732226 - AluSp SINE Alu -18 295 1 1620 156 19 106 chr18 22945368 22945785 -63731763 + MLT1B LTR MaLR 4 384 -6 333 278 111 39 chr18 22946221 22946362 -63731186 - L1ME4a LINE L1 -46 6075 5946 1536 137 98 4 chr18 22946362 22946639 -63730909 - AluSx SINE Alu -9 303 1 333 278 111 39 chr18 22946639 22946831 -63730717 - L1ME4a LINE L1 -175 5946 5718 189 194 0 0 chr18 22946840 22946876 -63730672 + L3 LINE CR1 1537 1572 -5 2413 246 79 8 chr18 22947069 22947781 -63729767 - L1MC4a LINE L1 -27 7781 7020 205 309 107 0 chr18 22948001 22948085 -63729463 - MIR SINE MIR -67 141 49 932 200 0 5 chr18 22948200 22948385 -63729163 - AluJo SINE Alu -11 301 118 2125 103 3 3 chr18 22948472 22948764 -63728784 + AluSp SINE Alu 1 292 -21 2020 124 6 22 chr18 22949458 22949773 -63727775 - AluSx SINE Alu -2 310 1 278 266 25 25 chr18 22949781 22949860 -63727688 + L2 LINE L2 3225 3303 -10 489 285 46 0 chr18 22950075 22950226 -63727322 - L1ME4a LINE L1 -259 5862 5705 2095 108 0 26 chr18 22950754 22951060 -63726488 + AluSq SINE Alu 1 298 -15 1796 148 3 7 chr18 22951065 22951369 -63726179 + AluJb SINE Alu 1 303 -9 2004 124 7 3 chr18 22952209 22952507 -63725041 - AluSp SINE Alu -14 299 1 400 295 135 35 chr18 22952911 22953417 -63724131 + MLT1K LTR MaLR 3 578 -10 614 168 7 19 chr18 22953644 22953799 -63723749 + CT-rich Low_complexity Low_complexity 4 156 0 1266 173 4 4 chr18 22953820 22954051 -63723497 - AluJb SINE Alu -1 311 81 306 244 105 0 chr18 22954118 22954204 -63723344 + MIR3 SINE MIR 110 204 -4 1986 121 0 3 chr18 22955487 22955776 -63721772 + AluSx SINE Alu 3 290 -22 859 157 0 15 chr18 22955998 22956132 -63721416 - FLAM_C SINE Alu -1 132 1 2113 94 3 26 chr18 22956372 22956679 -63720869 - AluSc SINE Alu -9 300 1 180 0 0 0 chr18 22957065 22957085 -63720463 + (TTA)n Simple_repeat Simple_repeat 3 22 0 1601 131 7 65 chr18 22957090 22957396 -63720152 - AluSx SINE Alu -24 288 1 1726 115 12 0 chr18 22957407 22957651 -63719897 - AluSx SINE Alu -26 286 40 1250 173 18 0 chr18 22957654 22957874 -63719674 - AluJo SINE Alu -17 295 72 276 296 159 0 chr18 22958438 22958570 -63718978 - L2 LINE L2 -4 3268 3116 328 335 126 6 chr18 22958729 22958896 -63718652 + MIR SINE MIR 76 262 0 2020 116 13 0 chr18 22958999 22959300 -63718248 - AluSx SINE Alu -7 305 1 2170 89 0 0 chr18 22959400 22959682 -63717866 - AluSg SINE Alu -28 282 1 3644 192 30 2 chr18 22959726 22960355 -63717193 - MER82 DNA MER2_type -6 647 1 186 250 0 0 chr18 22960363 22960419 -63717129 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 640 253 151 22 chr18 22960778 22961003 -63716545 + MIR SINE MIR 9 262 0 29 0 0 0 chr18 22961663 22961692 -63715856 + AT_rich Low_complexity Low_complexity 1 29 0 770 162 0 0 chr18 22961702 22961819 -63715729 - FLAM_C SINE Alu -25 118 2 954 304 75 28 chr18 22961948 22962220 -63715328 - MLT1J LTR MaLR -19 492 234 201 39 0 0 chr18 22962220 22962246 -63715302 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1828 138 4 0 chr18 22962254 22962529 -63715019 - AluSx SINE Alu -36 276 1 954 304 75 28 chr18 22962529 22962675 -63714873 - MLT1J LTR MaLR -283 228 39 1948 125 7 3 chr18 22962675 22962971 -63714577 + AluSg SINE Alu 1 297 -13 954 304 75 28 chr18 22962971 22963012 -63714536 - MLT1J LTR MaLR -472 39 1 2035 122 0 13 chr18 22963120 22963424 -63714124 + AluSx SINE Alu 3 302 -10 2201 100 7 0 chr18 22963834 22964143 -63713405 - AluSx SINE Alu -1 311 1 543 228 9 9 chr18 22964622 22964736 -63712812 - L2 LINE L2 -3 3310 3197 2405 69 0 0 chr18 22964736 22965042 -63712506 - AluY SINE Alu -5 306 1 351 319 88 35 chr18 22965413 22965673 -63711875 + L2 LINE L2 2968 3241 -31 382 229 263 62 chr18 22965944 22966016 -63711532 - MIR SINE MIR -32 230 174 1748 108 50 4 chr18 22966016 22966293 -63711255 - AluSx SINE Alu -22 290 1 382 229 263 62 chr18 22966293 22966399 -63711149 - MIR SINE MIR -88 174 16 328 306 65 0 chr18 22967493 22967601 -63709947 - MIR SINE MIR -100 162 48 183 42 0 0 chr18 22967654 22967678 -63709870 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1871 109 21 25 chr18 22967683 22967968 -63709580 - AluSx SINE Alu -28 284 1 764 137 0 58 chr18 22967968 22968107 -63709441 - FRAM SINE Alu -10 166 36 1146 211 26 0 chr18 22969465 22969692 -63707856 - MIR SINE MIR -2 260 28 26 64 0 0 chr18 22971964 22972011 -63705537 + GC_rich Low_complexity Low_complexity 1 47 0 180 176 0 0 chr18 22972882 22972916 -63704632 + A-rich Low_complexity Low_complexity 2 35 0 198 0 0 0 chr18 22973272 22973294 -63704254 + (CAA)n Simple_repeat Simple_repeat 2 23 0 23 33 0 0 chr18 22975353 22975383 -63702165 + GC_rich Low_complexity Low_complexity 1 30 0 220 135 0 77 chr18 22975653 22975705 -63701843 + (TCCCC)n Simple_repeat Simple_repeat 4 51 0 856 239 21 29 chr18 22977847 22978085 -63699463 + L1ME1 LINE L1 5922 6157 -9 659 275 91 42 chr18 22978305 22978636 -63698912 + MLT1I LTR MaLR 63 409 0 26 0 0 0 chr18 22978877 22978903 -63698645 + AT_rich Low_complexity Low_complexity 1 26 0 260 322 75 53 chr18 22979755 22979982 -63697566 + MARNA DNA Mariner 159 390 -196 21 0 0 0 chr18 22980172 22980193 -63697355 + AT_rich Low_complexity Low_complexity 1 21 0 299 357 0 0 chr18 22980441 22980525 -63697023 + L2 LINE L2 3160 3243 -29 308 149 0 15 chr18 22981053 22981120 -63696428 + (CA)n Simple_repeat Simple_repeat 1 66 0 206 355 9 55 chr18 22981676 22981786 -63695762 - MIR3 SINE MIR -25 183 79 411 266 49 119 chr18 22982135 22982522 -63695026 - L2 LINE L2 -434 2880 2521 1926 223 17 28 chr18 22982660 22983127 -63694421 - MLT1C LTR MaLR 0 467 6 23 0 0 0 chr18 22983700 22983723 -63693825 + AT_rich Low_complexity Low_complexity 1 23 0 16940 32 0 1 chr18 22986589 22988596 -63688952 - L1P LINE L1 -1107 5039 3034 426 248 156 61 chr18 22989233 22989528 -63688020 - L2 LINE L2 0 3313 2991 1883 116 28 0 chr18 22990054 22990338 -63687210 + MER61A-int LTR ERV1 4926 5217 0 1916 182 18 9 chr18 22990338 22990678 -63686870 + MER61A LTR ERV1 1 343 0 1305 120 0 0 chr18 22990679 22990862 -63686686 + MER49 LTR ERV1 112 294 -629 1303 219 26 5 chr18 22990882 22991161 -63686387 + MER4D LTR ERV1 326 525 -85 534 165 0 0 chr18 22991521 22991606 -63685942 - AluJ/FLAM SINE Alu -225 87 3 826 267 48 38 chr18 22991986 22992357 -63685191 + L1ME4a LINE L1 5522 5896 -225 586 100 0 0 chr18 22992529 22992609 -63684939 - MADE1 DNA Mariner 0 80 1 2168 99 0 0 chr18 22992910 22993183 -63684365 - AluSx SINE Alu -39 273 1 201 294 111 8 chr18 22995936 22996062 -63681486 + L2 LINE L2 3103 3241 -31 323 230 259 63 chr18 22996333 22996405 -63681143 - MIR SINE MIR -32 230 173 1868 108 50 4 chr18 22996405 22996682 -63680866 - AluSx SINE Alu -22 290 1 323 230 259 63 chr18 22996682 22996783 -63680765 - MIR SINE MIR -89 173 23 291 301 0 0 chr18 22997879 22997972 -63679576 - MIR SINE MIR -100 162 70 2029 114 19 16 chr18 22998038 22998346 -63679202 - AluSg SINE Alu -1 309 1 275 0 0 28 chr18 22998671 22998707 -63678841 + (CAA)n Simple_repeat Simple_repeat 2 36 0 207 196 137 0 chr18 22999541 22999592 -63677956 + MER5B DNA MER1_type 1 58 -120 543 151 8 17 chr18 22999906 23000025 -63677523 + CT-rich Low_complexity Low_complexity 3 120 0 1976 150 20 7 chr18 23000028 23000334 -63677214 - AluJo SINE Alu -2 310 1 258 81 0 0 chr18 23001434 23001471 -63676077 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 2175 118 10 3 chr18 23001902 23002198 -63675350 + AluSq SINE Alu 1 298 -15 831 225 115 12 chr18 23002752 23003005 -63674543 + MLT1C LTR MaLR 187 465 -2 24 32 0 0 chr18 23003410 23003441 -63674107 + AT_rich Low_complexity Low_complexity 1 31 0 817 113 0 93 chr18 23004551 23004702 -63672846 + FLAM_C SINE Alu 2 138 -5 232 183 117 17 chr18 23004830 23004890 -63672658 - MIR3 SINE MIR -54 154 89 209 165 38 51 chr18 23005141 23005269 -63672279 + (TTATA)n Simple_repeat Simple_repeat 1 126 0 186 71 0 0 chr18 23005502 23005530 -63672018 + (GGCTG)n Simple_repeat Simple_repeat 4 31 0 296 247 0 0 chr18 23008801 23008878 -63668670 + (TG)n Simple_repeat Simple_repeat 1 77 0 228 287 74 28 chr18 23009113 23009221 -63668327 + MIR SINE MIR 99 211 -51 211 157 0 78 chr18 23009796 23009847 -63667701 - L2 LINE L2 -1 3271 3225 202 263 90 98 chr18 23010629 23010762 -63666786 + MIR SINE MIR 107 238 -24 425 188 0 10 chr18 23010974 23011070 -63666478 + CT-rich Low_complexity Low_complexity 2 96 0 221 333 43 27 chr18 23011340 23011526 -63666022 + L2 LINE L2 2807 2995 -277 1678 97 5 0 chr18 23011561 23011777 -63665771 + AluSq SINE Alu 1 217 -96 300 324 114 35 chr18 23013884 23014657 -63662891 + L2 LINE L2 2429 3271 -1 468 274 146 22 chr18 23015089 23015315 -63662233 + MIR SINE MIR 9 262 0 199 250 12 12 chr18 23015374 23015454 -63662094 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 905 179 36 0 chr18 23015471 23015639 -63661909 - MIR SINE MIR -72 190 17 213 208 78 26 chr18 23016480 23016557 -63660991 + MIR SINE MIR 81 161 -101 507 231 58 0 chr18 23016816 23016937 -63660611 - MIR SINE MIR -70 192 65 353 348 89 28 chr18 23016992 23017108 -63660440 - MIR SINE MIR 0 262 154 1921 157 3 0 chr18 23017108 23017408 -63660140 + AluJo SINE Alu 2 302 -10 353 348 89 28 chr18 23017408 23017538 -63660010 - MIR SINE MIR -108 154 1 232 214 57 0 chr18 23017555 23017625 -63659923 + MIR SINE MIR 188 261 -1 1313 165 38 130 chr18 23017653 23018023 -63659525 - MLT1E LTR MaLR -1 592 257 21 36 0 0 chr18 23018194 23018222 -63659326 + GC_rich Low_complexity Low_complexity 1 28 0 180 125 0 0 chr18 23018517 23018549 -63658999 + (CGG)n Simple_repeat Simple_repeat 3 34 0 21 36 0 0 chr18 23018645 23018673 -63658875 + GC_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr18 23018715 23018756 -63658792 + GC_rich Low_complexity Low_complexity 1 41 0 239 0 0 31 chr18 23018968 23019000 -63658548 + (CCA)n Simple_repeat Simple_repeat 1 31 0 1789 117 70 0 chr18 23020535 23020791 -63656757 - AluSx SINE Alu -37 275 2 23 33 0 0 chr18 23022954 23022984 -63654564 + AT_rich Low_complexity Low_complexity 1 30 0 206 263 38 12 chr18 23023987 23024067 -63653481 + (CCCGG)n Simple_repeat Simple_repeat 1 82 0 2649 44 0 9 chr18 23024806 23025122 -63652426 - AluSp SINE Alu 0 313 1 783 87 0 0 chr18 23026971 23027075 -63650473 - U6 snRNA snRNA -2 105 2 24 32 0 0 chr18 23027524 23027555 -63649993 + AT_rich Low_complexity Low_complexity 1 31 0 611 244 35 0 chr18 23028597 23028769 -63648779 - MER104 DNA Tc2 -2 178 1 2376 103 0 0 chr18 23029204 23029515 -63648033 - AluSq SINE Alu -2 311 1 360 272 44 51 chr18 23030840 23030998 -63646550 - MER5A DNA MER1_type -30 159 3 1982 128 7 20 chr18 23031360 23031656 -63645892 - AluSx SINE Alu -20 292 1 2285 104 3 0 chr18 23034056 23034353 -63643195 + AluSp SINE Alu 1 298 -15 711 113 0 113 chr18 23034812 23034962 -63642586 + FLAM_C SINE Alu 1 133 0 317 254 74 6 chr18 23037462 23037599 -63639949 - MIR SINE MIR -94 168 13 369 0 0 0 chr18 23037894 23037935 -63639613 + (TG)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr18 23038515 23038536 -63639012 + AT_rich Low_complexity Low_complexity 1 21 0 348 111 0 0 chr18 23038729 23038783 -63638765 + (TA)n Simple_repeat Simple_repeat 2 55 0 407 289 60 69 chr18 23038839 23038941 -63638607 - MIR SINE MIR -13 249 148 2193 117 0 7 chr18 23038941 23039248 -63638300 - AluSq SINE Alu -8 305 1 407 289 60 69 chr18 23039248 23039377 -63638171 - MIR SINE MIR -114 148 20 2520 49 0 10 chr18 23039790 23040094 -63637454 - AluSp SINE Alu -12 301 1 783 87 0 0 chr18 23041943 23042047 -63635501 - U6 snRNA snRNA -2 105 2 23 33 0 0 chr18 23042495 23042525 -63635023 + AT_rich Low_complexity Low_complexity 1 30 0 611 244 35 0 chr18 23043568 23043740 -63633808 - MER104 DNA Tc2 -2 178 1 2308 108 0 0 chr18 23044179 23044485 -63633063 - AluSq SINE Alu -7 306 1 360 272 44 51 chr18 23045809 23045967 -63631581 - MER5A DNA MER1_type -30 159 3 304 186 17 0 chr18 23047314 23047373 -63630175 - AluJ/FLAM SINE Alu -242 60 1 723 197 0 15 chr18 23047700 23047832 -63629716 - FLAM_A SINE Alu -3 130 1 1478 152 0 5 chr18 23047922 23048146 -63629402 + AluJb SINE Alu 76 298 -14 222 248 34 114 chr18 23048202 23048271 -63629277 + MIR SINE MIR 31 83 -179 1032 56 63 14 chr18 23048271 23048413 -63629135 - L1PA10 LINE L1 -1 6167 6019 222 248 34 114 chr18 23048413 23048492 -63629056 + MIR SINE MIR 83 167 -95 371 264 9 27 chr18 23048494 23048604 -63628944 - L2 LINE L2 -19 3294 3187 196 263 105 0 chr18 23048602 23048678 -63628870 + MIR SINE MIR 169 252 -10 * 198 250 0 0 chr18 23048646 23048690 -63628858 + L2 LINE L2 3266 3309 -4 723 123 66 8 chr18 23049107 23049229 -63628319 - FLAM_C SINE Alu -4 129 1 36 23 0 0 chr18 23050579 23050622 -63626926 + AT_rich Low_complexity Low_complexity 1 43 0 2396 99 0 0 chr18 23050692 23050996 -63626552 + AluSx SINE Alu 1 304 -8 419 221 10 10 chr18 23051214 23051318 -63626230 + L1MC4a LINE L1 5827 5930 -1878 2124 136 0 3 chr18 23052020 23052322 -63625226 + AluSx SINE Alu 1 301 -11 180 0 0 0 chr18 23053493 23053513 -63624035 + (TG)n Simple_repeat Simple_repeat 2 21 0 290 272 127 0 chr18 23053687 23053835 -63623713 - MIR SINE MIR 0 262 81 2107 112 3 3 chr18 23054409 23054696 -63622852 + AluSx SINE Alu 16 302 -10 544 146 87 10 chr18 23054720 23054823 -63622725 + FRAM SINE Alu 19 129 -47 776 246 203 31 chr18 23054851 23055172 -63622376 + L1MC4 LINE L1 7377 7752 -290 771 130 117 39 chr18 23055176 23055330 -63622218 + FRAM SINE Alu 4 169 -7 572 239 8 0 chr18 23055346 23055480 -63622068 + L1MC4 LINE L1 7775 7909 -133 21 57 0 0 chr18 23055480 23055515 -63622033 + AT_rich Low_complexity Low_complexity 1 35 0 282 185 196 0 chr18 23055554 23055646 -63621902 + L1MC4 LINE L1 7931 8040 -2 1774 166 0 22 chr18 23055812 23056126 -63621422 + AluJb SINE Alu 5 311 -1 316 331 57 6 chr18 23056199 23056374 -63621174 + MIR SINE MIR 2 185 -77 2037 127 17 3 chr18 23059896 23060195 -63617353 + AluSx SINE Alu 1 303 -9 2203 113 7 0 chr18 23060399 23060692 -63616856 + AluSx SINE Alu 1 295 -17 234 267 0 0 chr18 23061586 23061646 -63615902 + L2 LINE L2 3215 3274 -39 382 255 217 0 chr18 23061841 23061998 -63615550 + MIR SINE MIR 15 205 -57 2287 110 7 0 chr18 23062644 23062945 -63614603 - AluSp SINE Alu -10 303 1 571 309 114 55 chr18 23063388 23063583 -63613965 + MLT1L LTR MaLR 113 295 -320 2324 103 3 0 chr18 23063583 23063884 -63613664 + AluSq SINE Alu 1 302 -11 571 309 114 55 chr18 23063884 23064161 -63613387 + MLT1L LTR MaLR 295 613 -2 1877 171 3 0 chr18 23064555 23064864 -63612684 + AluJo SINE Alu 1 310 -2 1272 107 0 0 chr18 23067536 23067836 -63609712 + (TGGA)n Simple_repeat Simple_repeat 1 300 0 1808 144 0 85 chr18 23067967 23068317 -63609231 - AluSx SINE Alu 0 312 1 258 243 100 0 chr18 23068493 23068563 -63608985 + L2 LINE L2 3196 3272 0 495 83 60 0 chr18 23069303 23069387 -63608161 + L1MB3 LINE L1 6094 6182 -1 30 59 0 0 chr18 23069557 23069608 -63607940 + AT_rich Low_complexity Low_complexity 1 51 0 216 211 18 0 chr18 23069661 23069718 -63607830 - MIR SINE MIR -131 131 74 1501 147 16 24 chr18 23069784 23070035 -63607513 - AluJo SINE Alu -20 292 44 312 70 0 0 chr18 23070108 23070151 -63607397 + (TC)n Simple_repeat Simple_repeat 1 43 0 189 259 250 9 chr18 23070620 23070736 -63606812 + MIR SINE MIR 44 187 -75 1884 161 0 3 chr18 23070766 23071052 -63606496 - AluJb SINE Alu -25 287 3 1973 133 3 24 chr18 23071094 23071387 -63606161 + AluJb SINE Alu 14 300 -12 2357 93 10 3 chr18 23071794 23072105 -63605443 + AluSp SINE Alu 1 313 0 865 164 15 0 chr18 23072122 23072256 -63605292 + AluJo SINE Alu 1 136 -176 251 224 168 19 chr18 23073184 23073291 -63604257 + L1ME LINE L1 5649 5771 -350 1526 153 0 69 chr18 23073328 23073648 -63603900 - L1MA9 LINE L1 -365 5947 5650 724 161 0 0 chr18 23073644 23073768 -63603780 + L1MA9 LINE L1 6013 6136 -176 * 1034 150 25 0 chr18 23073769 23073929 -63603619 + AluJo SINE Alu 134 297 -15 1234 215 58 31 chr18 23074773 23075066 -63602482 + AluJo SINE Alu 2 302 0 210 242 15 45 chr18 23075341 23075407 -63602141 + MIR SINE MIR 81 144 -64 261 0 0 0 chr18 23075542 23075571 -63601977 + (CA)n Simple_repeat Simple_repeat 2 30 0 937 162 157 43 chr18 23076157 23076367 -63601181 - L1MC1 LINE L1 -2 6331 6098 354 258 200 7 chr18 23076577 23076732 -63600816 - MER5A DNA MER1_type -1 188 4 2196 116 0 0 chr18 23076935 23077243 -63600305 - AluSx SINE Alu 0 308 1 232 139 0 0 chr18 23077243 23077261 -63600287 + (TTA)n Simple_repeat Simple_repeat 3 180 0 1610 174 4 8 chr18 23077297 23077561 -63599987 - AluJb SINE Alu -49 263 1 25 0 0 0 chr18 23077728 23077753 -63599795 + AT_rich Low_complexity Low_complexity 1 25 0 375 255 49 10 chr18 23077940 23078042 -63599506 - MIR3 SINE MIR -18 190 85 244 347 0 0 chr18 23078501 23078576 -63598972 - Charlie4 DNA MER1_type -5 1956 1882 5009 118 3 0 chr18 23078595 23079312 -63598236 + L1PA14 LINE L1 5440 6158 -3 1015 147 5 90 chr18 23079481 23079692 -63597856 + AluJo SINE Alu 90 282 -30 1791 152 6 40 chr18 23080339 23080662 -63596886 + AluJb SINE Alu 1 312 0 1385 161 0 0 chr18 23081406 23081611 -63595937 - AluJo SINE Alu -22 290 86 22 0 0 0 chr18 23081677 23081699 -63595849 + AT_rich Low_complexity Low_complexity 1 22 0 2155 73 0 7 chr18 23081778 23082050 -63595498 + AluSc SINE Alu 1 270 -39 586 100 0 0 chr18 23082355 23082435 -63595113 + MADE1 DNA Mariner 1 80 0 826 267 48 38 chr18 23082607 23082978 -63594570 - L1ME4a LINE L1 -225 5896 5522 2057 154 0 3 chr18 23083358 23083669 -63593879 + AluJb SINE Alu 3 312 0 419 190 14 113 chr18 23083927 23083981 -63593567 - MIR SINE MIR -26 236 178 1729 124 109 4 chr18 23083981 23084248 -63593300 - AluSq SINE Alu -18 295 1 419 190 14 113 chr18 23084248 23084335 -63593213 - MIR SINE MIR -84 178 109 233 282 48 29 chr18 23084492 23084595 -63592953 - MIR SINE MIR 0 262 158 1854 153 47 7 chr18 23084967 23085267 -63592281 - AluJo SINE Alu 0 312 1 2463 93 7 0 chr18 23086517 23086827 -63590721 + AluSx SINE Alu 1 312 0 225 0 0 0 chr18 23087073 23087098 -63590450 + (TG)n Simple_repeat Simple_repeat 1 25 0 180 0 0 0 chr18 23089572 23089592 -63587956 + (TG)n Simple_repeat Simple_repeat 2 21 0 516 298 125 0 chr18 23089643 23089851 -63587697 + MIR SINE MIR 8 241 -21 827 200 0 7 chr18 23091085 23091277 -63586271 - FRAM SINE Alu 0 188 1 21 0 0 0 chr18 23091957 23091978 -63585570 + AT_rich Low_complexity Low_complexity 1 21 0 181 319 59 50 chr18 23092093 23092212 -63585336 + MIR3 SINE MIR 85 204 -4 824 254 79 0 chr18 23092773 23093013 -63584535 - MIR SINE MIR -3 259 1 2245 100 0 0 chr18 23093048 23093357 -63584191 + AluSx SINE Alu 5 313 0 247 293 30 10 chr18 23093930 23094029 -63583519 - MER5A DNA MER1_type 0 189 89 342 163 12 23 chr18 23094178 23094264 -63583284 + CT-rich Low_complexity Low_complexity 3 87 0 1959 148 3 0 chr18 23094303 23094594 -63582954 - AluSx SINE Alu -20 292 1 1305 272 69 44 chr18 23094656 23095598 -63581950 - L1MC4a LINE L1 -744 5402 4881 22 0 0 0 chr18 23095668 23095690 -63581858 + AT_rich Low_complexity Low_complexity 1 22 0 562 265 46 62 chr18 23095690 23095782 -63581766 - L1MC4a LINE L1 -1300 4846 4754 2152 146 9 9 chr18 23095782 23096125 -63581423 - MER7A DNA MER2_type -4 342 2 562 265 46 62 chr18 23096125 23096512 -63581036 - L1MC4a LINE L1 -1392 4754 4375 182 192 308 26 chr18 23096716 23096794 -63580754 - MIR3 SINE MIR -1 207 108 2061 116 36 3 chr18 23097607 23097908 -63579640 - AluSx SINE Alu -1 311 1 194 318 0 11 chr18 23098231 23098319 -63579229 + L2 LINE L2 1947 2033 -1281 245 321 62 0 chr18 23098376 23098488 -63579060 + MIR SINE MIR 50 168 -94 363 83 0 0 chr18 23098667 23098715 -63578833 - MLT2B1 LTR ERVL -7 513 466 276 30 0 0 chr18 23098754 23098787 -63578761 + (TA)n Simple_repeat Simple_repeat 1 33 0 336 77 0 0 chr18 23098787 23098839 -63578709 + (GA)n Simple_repeat Simple_repeat 1 52 0 1126 163 44 9 chr18 23098839 23099050 -63578498 - MLT2C2 LTR ERVL -19 535 221 1345 113 67 0 chr18 23099051 23099245 -63578303 - AluSg/x SINE Alu -21 289 83 940 164 48 6 chr18 23099249 23099414 -63578134 - MLT2D LTR ERVL -186 228 57 1207 204 39 18 chr18 23099414 23099576 -63577972 - AluJo SINE Alu -16 296 124 2139 131 0 13 chr18 23099576 23099881 -63577667 - AluSx SINE Alu -11 301 1 1207 204 39 18 chr18 23099881 23100003 -63577545 - AluJo SINE Alu -188 124 6 443 154 0 0 chr18 23100009 23100074 -63577474 - MLT2D LTR ERVL -398 66 2 369 311 15 0 chr18 23100307 23100442 -63577106 + MIR3 SINE MIR 49 185 -23 2085 136 3 0 chr18 23100579 23100888 -63576660 + AluSx SINE Alu 2 311 -1 24 53 0 0 chr18 23100990 23101028 -63576520 + AT_rich Low_complexity Low_complexity 1 38 0 422 299 43 12 chr18 23101112 23101276 -63576272 + MIR SINE MIR 8 176 -86 422 193 11 0 chr18 23101989 23102077 -63575471 + L1MA9 LINE L1 6202 6290 -22 23 0 0 0 chr18 23102077 23102100 -63575448 + AT_rich Low_complexity Low_complexity 1 23 0 2220 118 0 3 chr18 23102103 23102416 -63575132 + AluSx SINE Alu 1 312 0 627 182 64 0 chr18 23102464 23102574 -63574974 + FLAM_C SINE Alu 1 117 -26 307 98 0 0 chr18 23102928 23102969 -63574579 - MER4D LTR ERV1 -72 800 760 1764 199 0 0 chr18 23102972 23103278 -63574270 - AluJb SINE Alu -6 306 1 1838 69 192 8 chr18 23103640 23103901 -63573647 + AluSg1 SINE Alu 1 309 0 318 61 20 0 chr18 23104335 23104384 -63573164 - Alu SINE Alu -2 300 251 978 122 19 0 chr18 23104484 23104640 -63572908 - L1MB3 LINE L1 -231 5952 5794 592 286 32 40 chr18 23105991 23106239 -63571309 + LTR33 LTR ERVL 197 442 -79 184 378 13 26 chr18 23106319 23106470 -63571078 + L2 LINE L2 2843 2991 -281 328 297 95 1 chr18 23107302 23107450 -63570098 + MIR SINE MIR 71 230 -32 300 330 112 0 chr18 23107678 23107866 -63569682 - MIR SINE MIR -25 237 29 1847 127 90 0 chr18 23108723 23108991 -63568557 - AluSx SINE Alu -20 292 1 407 256 22 36 chr18 23109035 23109172 -63568376 - MIR SINE MIR -108 154 20 219 113 57 0 chr18 23109188 23109241 -63568307 + (TA)n Simple_repeat Simple_repeat 2 57 0 225 159 0 0 chr18 23109395 23109439 -63568109 + A-rich Low_complexity Low_complexity 1 44 0 235 135 81 108 chr18 23109876 23109987 -63567561 - MIR SINE MIR -71 137 53 2177 117 0 0 chr18 23110649 23110960 -63566588 - AluSx SINE Alu 0 311 1 526 169 0 0 chr18 23111500 23111583 -63565965 + AluJ/FLAM SINE Alu 3 85 -227 1321 225 31 0 chr18 23111632 23111921 -63565627 + MLT1E2 LTR MaLR 137 434 -192 865 121 8 15 chr18 23111923 23112055 -63565493 + FLAM_C SINE Alu 2 132 -1 528 255 24 4 chr18 23112055 23112299 -63565249 + GA-rich Low_complexity Low_complexity 1 248 0 1203 138 154 28 chr18 23112400 23112653 -63564895 + AluJb SINE Alu 28 312 0 230 146 0 36 chr18 23113393 23113448 -63564100 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 2056 88 7 3 chr18 23114216 23114501 -63563047 - L1P5 LINE L1 -584 5567 5282 607 152 0 9 chr18 23114501 23114602 -63562946 + L1PB1 LINE L1 6048 6151 0 2401 88 3 0 chr18 23114656 23114953 -63562595 - AluSp SINE Alu -13 300 3 435 253 208 10 chr18 23115167 23115369 -63562179 + MIR SINE MIR 11 252 -10 273 231 254 45 chr18 23115581 23115715 -63561833 - L2 LINE L2 0 3272 3111 233 279 17 64 chr18 23116001 23116173 -63561375 - L2 LINE L2 -787 2527 2364 651 176 118 0 chr18 23117436 23117555 -63559993 - FLAM_C SINE Alu 0 133 1 2099 109 10 16 chr18 23117922 23118233 -63559315 + AluSq SINE Alu 1 309 -4 609 257 160 0 chr18 23118292 23118479 -63559069 - MIR SINE MIR -16 246 30 2073 256 105 31 chr18 23118484 23119473 -63558075 - L1M4 LINE L1 -1030 5185 4124 2677 151 25 17 chr18 23119535 23119665 -63557883 - L1MB4 LINE L1 -1 6179 6052 2365 114 0 0 chr18 23119665 23119971 -63557577 - AluSx SINE Alu -6 306 1 2677 151 25 17 chr18 23119971 23120356 -63557192 - L1MB4 LINE L1 -128 6052 5660 910 194 6 0 chr18 23120356 23120516 -63557032 - MSTD LTR MaLR -18 378 218 1173 296 72 61 chr18 23120570 23122160 -63555388 - L1MEc LINE L1 -3339 2876 1314 1393 140 18 13 chr18 23122160 23122389 -63555159 - MER30 DNA MER1_type 0 230 1 1173 296 72 61 chr18 23122389 23122465 -63555083 - L1MEc LINE L1 -4901 1314 1240 208 314 0 47 chr18 23122606 23122692 -63554856 - L3 LINE CR1 -219 1358 1277 344 71 0 0 chr18 23122705 23122747 -63554801 - 5S rRNA rRNA -79 42 1 1758 166 82 3 chr18 23122875 23123194 -63554354 + MER2 DNA MER2_type 1 344 0 358 252 122 8 chr18 23123198 23123321 -63554227 - MIR SINE MIR -120 142 6 278 317 29 19 chr18 23123341 23123445 -63554103 - L3 LINE CR1 -623 954 850 295 264 142 14 chr18 23123518 23123666 -63553882 - L3 LINE CR1 -726 851 685 538 310 61 67 chr18 23123855 23124184 -63553364 - L3 LINE CR1 -1214 363 37 459 264 102 20 chr18 23124194 23124391 -63553157 + MIR SINE MIR 3 215 -47 367 259 80 0 chr18 23124607 23124719 -63552829 + MIR3 SINE MIR 76 196 -12 24 0 0 0 chr18 23125259 23125283 -63552265 + AT_rich Low_complexity Low_complexity 1 24 0 330 26 0 0 chr18 23125478 23125517 -63552031 + (TAAAA)n Simple_repeat Simple_repeat 5 43 0 2279 105 0 19 chr18 23125658 23125972 -63551576 - AluSg SINE Alu -2 308 1 198 0 0 0 chr18 23126599 23126621 -63550927 + (TG)n Simple_repeat Simple_repeat 2 23 0 244 353 72 13 chr18 23126965 23127118 -63550430 - L2 LINE L2 -14 3258 3097 251 203 14 0 chr18 23127752 23127821 -63549727 + CT-rich Low_complexity Low_complexity 3 72 0 770 259 52 60 chr18 23127846 23128213 -63549335 - L1MD2 LINE L1 -14 6345 5982 367 325 46 10 chr18 23129111 23129305 -63548243 - L3 LINE CR1 -258 1319 1119 25 0 0 0 chr18 23129545 23129570 -63547978 + AT_rich Low_complexity Low_complexity 1 25 0 508 200 10 0 chr18 23129930 23130030 -63547518 + U13 snRNA snRNA 4 104 0 2145 108 3 7 chr18 23130123 23130420 -63547128 - AluSc SINE Alu -13 296 1 4633 138 41 11 chr18 23130425 23131206 -63546342 - L1PA16 LINE L1 -3 6163 5360 1864 121 38 60 chr18 23131264 23131578 -63545970 + AluSx SINE Alu 1 307 -5 736 223 39 163 chr18 23131653 23132217 -63545331 - L1MC4 LINE L1 -2 8040 7547 304 295 78 18 chr18 23132223 23132389 -63545159 - L1MEd LINE L1 -5092 1027 852 2001 106 0 60 chr18 23132994 23133125 -63544423 - AluSx SINE Alu 0 308 171 2203 119 0 7 chr18 23133125 23133428 -63544120 - AluSx SINE Alu -11 301 1 2001 106 0 60 chr18 23133428 23133621 -63543927 - AluSx SINE Alu -137 171 2 230 323 79 39 chr18 23133856 23134110 -63543438 + L2 LINE L2 2714 2977 -337 519 327 124 14 chr18 23134419 23134883 -63542665 + L2 LINE L2 2799 3313 0 216 0 0 0 chr18 23135561 23135585 -63541963 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2292 112 0 0 chr18 23135938 23136234 -63541314 + AluSx SINE Alu 1 296 -16 364 308 80 27 chr18 23136407 23136631 -63540917 - MIR SINE MIR -26 236 1 662 301 5 0 chr18 23137238 23137424 -63540124 + MIR SINE MIR 54 240 -22 285 98 0 0 chr18 23137442 23137483 -63540065 + (CAGA)n Simple_repeat Simple_repeat 4 44 0 308 261 0 34 chr18 23137496 23137584 -63539964 - MIR SINE MIR -126 136 52 191 111 0 28 chr18 23137669 23137705 -63539843 + (ATG)n Simple_repeat Simple_repeat 2 36 0 1559 224 37 81 chr18 23137822 23138305 -63539243 + MLT1C LTR MaLR 6 467 0 505 182 41 41 chr18 23138308 23138429 -63539119 - MIR SINE MIR -65 143 23 782 179 33 20 chr18 23138487 23138638 -63538910 - LTR32 LTR ERVL 0 471 319 1797 185 28 0 chr18 23138647 23138971 -63538577 - LTR32 LTR ERVL -119 352 20 1004 267 95 14 chr18 23139556 23139987 -63537561 + L2 LINE L2 2829 3294 -19 896 168 7 7 chr18 23140501 23140656 -63536892 - LTR32 LTR ERVL 0 471 317 1502 187 93 0 chr18 23140711 23141021 -63536527 - LTR32 LTR ERVL -119 352 14 1884 241 67 26 chr18 23144058 23144623 -63532925 + MLT1E LTR MaLR 3 590 -3 1771 179 3 13 chr18 23145132 23145445 -63532103 - AluJo SINE Alu 0 312 3 200 157 20 20 chr18 23145584 23145635 -63531913 + (TGAA)n Simple_repeat Simple_repeat 2 52 0 3266 166 52 17 chr18 23146203 23146842 -63530706 + L1MA8 LINE L1 5631 6291 0 612 61 31 0 chr18 23147976 23148074 -63529474 + (TCTA)n Simple_repeat Simple_repeat 1 101 0 252 0 0 0 chr18 23148470 23148498 -63529050 + (CA)n Simple_repeat Simple_repeat 2 29 0 324 313 3 67 chr18 23149928 23150063 -63527485 + MIR SINE MIR 21 152 -56 275 289 39 23 chr18 23151670 23151798 -63525750 - LTR16C LTR ERVL -10 481 352 2053 103 50 13 chr18 23152243 23152544 -63525004 + AluSx SINE Alu 1 312 0 188 266 16 0 chr18 23152852 23152916 -63524632 + L2 LINE L2 2790 2854 -460 442 320 45 67 chr18 23152932 23153288 -63524260 - L2 LINE L2 -8 3264 2917 618 173 39 0 chr18 23153907 23154034 -63523514 - FLAM_C SINE Alu 0 133 2 22 35 0 0 chr18 23154285 23154314 -63523234 + AT_rich Low_complexity Low_complexity 1 29 0 281 334 79 9 chr18 23154576 23154741 -63522807 + MIR SINE MIR 17 190 -72 209 95 0 24 chr18 23155460 23155502 -63522046 + (TTTTTG)n Simple_repeat Simple_repeat 3 43 0 698 230 73 36 chr18 23155506 23155754 -63521794 + MER46C DNA MER2_type 80 336 -2 411 295 69 0 chr18 23155786 23155959 -63521589 - MIR SINE MIR -60 202 18 784 207 101 0 chr18 23156041 23156229 -63521319 + MIR SINE MIR 1 207 -55 575 257 84 19 chr18 23157350 23157564 -63519984 + MIR SINE MIR 35 262 0 256 293 75 0 chr18 23157578 23157684 -63519864 + MIR SINE MIR 77 190 -72 322 250 64 4 chr18 23157959 23158099 -63519449 - MIR SINE MIR -33 229 21 276 270 61 0 chr18 23159523 23159638 -63517910 - MIR3 SINE MIR -6 202 81 26 30 0 0 chr18 23160056 23160089 -63517459 + GC_rich Low_complexity Low_complexity 1 33 0 636 276 22 5 chr18 23161948 23162133 -63515415 - MIR SINE MIR -8 254 67 283 345 56 7 chr18 23162306 23162448 -63515100 - MIR SINE MIR -98 164 16 396 59 0 0 chr18 23162493 23162544 -63515004 + (TG)n Simple_repeat Simple_repeat 2 52 0 182 314 0 0 chr18 23162699 23162750 -63514798 + MIR SINE MIR 212 262 0 2214 65 11 0 chr18 23162766 23163127 -63514421 - AluY SINE Alu 0 364 1 196 279 44 44 chr18 23163391 23163459 -63514089 + L2 LINE L2 3188 3255 -17 1085 63 0 0 chr18 23163645 23163787 -63513761 - L1MA6 LINE L1 0 6300 6159 5637 133 12 11 chr18 23163888 23165502 -63512046 - L1MA6 LINE L1 -133 6167 4549 4437 120 37 7 chr18 23165515 23166222 -63511326 - L1PB4 LINE L1 -3 6153 5426 713 282 68 0 chr18 23166266 23166472 -63511076 - MIR SINE MIR -30 232 13 371 262 27 59 chr18 23167774 23167954 -63509594 - MIR SINE MIR -64 144 22 474 146 0 0 chr18 23168443 23168525 -63509023 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 437 260 99 69 chr18 23168529 23168921 -63508627 - MLT1J2 LTR MaLR -32 418 15 32 26 0 0 chr18 23169211 23169250 -63508298 + AT_rich Low_complexity Low_complexity 1 39 0 2118 97 38 0 chr18 23169309 23169597 -63507951 - AluSp SINE Alu -14 299 1 30 0 0 0 chr18 23169830 23169860 -63507688 + AT_rich Low_complexity Low_complexity 1 30 0 280 323 108 39 chr18 23169932 23170319 -63507229 + L1MC4a LINE L1 5533 5946 -1862 180 0 0 0 chr18 23170320 23170340 -63507208 + (CAAAAA)n Simple_repeat Simple_repeat 4 23 0 1435 146 36 99 chr18 23170548 23170881 -63506667 + AluJb SINE Alu 1 314 0 507 287 117 5 chr18 23171048 23171271 -63506277 - MIR SINE MIR -1 261 14 181 208 28 0 chr18 23171461 23171533 -63506015 + (TA)n Simple_repeat Simple_repeat 1 74 0 817 75 0 0 chr18 23172338 23172444 -63505104 + AluSg/x SINE Alu 198 303 -6 333 207 110 0 chr18 23172767 23172849 -63504699 + MER117 DNA MER1_type 1 91 -106 232 316 182 0 chr18 23172997 23173222 -63504326 + L1MEd LINE L1 90 355 -5764 850 279 53 61 chr18 23173274 23173931 -63503617 + L1MEd LINE L1 587 1238 -4881 2717 290 63 26 chr18 23173931 23175590 -63501958 + L2 LINE L2 1597 3313 0 514 130 0 0 chr18 23175609 23175678 -63501870 + Tigger2 DNA MER2_type 1 69 -2649 * 2442 100 74 5 chr18 23175662 23176041 -63501507 + Tigger2 DNA MER2_type 2267 2671 -47 5365 135 45 60 chr18 23176276 23176599 -63500949 - L1MA4 LINE L1 -6 6294 5968 1632 178 26 33 chr18 23176599 23176902 -63500646 - AluJo SINE Alu -11 301 1 5365 135 45 60 chr18 23176902 23177659 -63499889 - L1MA4 LINE L1 -332 5968 5223 392 326 98 17 chr18 23177666 23177853 -63499695 + HAL1 LINE L1 1433 1633 -874 244 305 11 0 chr18 23178950 23179045 -63498503 + L1MEd LINE L1 2152 2247 -3882 290 289 141 23 chr18 23179155 23179283 -63498265 + L2 LINE L2 3171 3313 0 473 241 28 0 chr18 23180544 23180652 -63496896 + MER81 DNA DNA 4 114 0 676 207 0 0 chr18 23180769 23180885 -63496663 + FLAM_C SINE Alu 1 116 -17 231 280 20 90 chr18 23180929 23181029 -63496519 + L2 LINE L2 2976 3068 -204 538 255 121 45 chr18 23181052 23181366 -63496182 + MER46C DNA MER2_type 1 338 0 368 307 124 41 chr18 23181552 23181946 -63495602 - MLT1L LTR MaLR -150 465 39 330 323 226 21 chr18 23181989 23182370 -63495178 - L3 LINE CR1 -296 1281 823 1513 222 78 8 chr18 23183097 23183467 -63494081 + MSTD LTR MaLR 1 396 0 307 287 28 21 chr18 23184105 23184248 -63493300 + L1ME1 LINE L1 97 240 -6302 245 313 10 10 chr18 23184609 23184705 -63492843 + L1ME1 LINE L1 780 875 -5667 1991 135 0 0 chr18 23184971 23185253 -63492295 + AluJb SINE Alu 1 282 -30 1054 186 79 31 chr18 23185270 23185625 -63491923 + L1ME1 LINE L1 1046 1417 -5125 474 195 17 8 chr18 23185626 23185744 -63491804 + L1ME1 LINE L1 2695 2813 -3831 6112 234 74 11 chr18 23185749 23188473 -63489075 + L1ME1 LINE L1 3559 6457 -207 782 192 0 0 chr18 23188604 23188734 -63488814 - FLAM_A SINE Alu -2 131 2 28 29 0 0 chr18 23188740 23188775 -63488773 + AT_rich Low_complexity Low_complexity 1 35 0 385 229 111 28 chr18 23189562 23189706 -63487842 + MLT1D LTR MaLR 1 156 -349 273 287 37 43 chr18 23189866 23190030 -63487518 - L1MC5 LINE L1 -76 7885 7723 574 216 90 36 chr18 23191056 23191223 -63486325 + MER20 DNA MER1_type 5 180 -39 475 300 100 32 chr18 23191662 23191972 -63485576 + MLT1I LTR MaLR 16 346 -63 21 0 0 0 chr18 23191972 23191993 -63485555 + AT_rich Low_complexity Low_complexity 1 21 0 470 147 27 0 chr18 23191994 23192069 -63485479 - AluJb SINE Alu -24 288 212 1455 191 8 12 chr18 23192069 23192326 -63485222 - AluJo SINE Alu -56 256 1 306 237 40 0 chr18 23192328 23192404 -63485144 + MLT1I LTR MaLR 331 409 0 991 237 108 44 chr18 23192482 23192937 -63484611 + MLT1L LTR MaLR 132 615 0 2106 120 6 41 chr18 23193222 23193538 -63484010 + AluSx SINE Alu 1 305 -7 25 31 0 0 chr18 23193709 23193741 -63483807 + AT_rich Low_complexity Low_complexity 1 32 0 294 328 16 68 chr18 23194051 23194243 -63483305 + MIR SINE MIR 2 183 -79 2215 103 3 7 chr18 23194276 23194576 -63482972 + AluSq SINE Alu 1 299 -14 2235 102 3 40 chr18 23194681 23195005 -63482543 + AluSx SINE Alu 1 312 0 1443 18 6 0 chr18 23195517 23195688 -63481860 - L1PA2 LINE L1 0 6155 5984 22 0 0 0 chr18 23195943 23195965 -63481583 + AT_rich Low_complexity Low_complexity 1 22 0 2072 116 10 10 chr18 23195967 23196261 -63481287 + AluSx SINE Alu 1 294 -18 192 77 0 0 chr18 23196328 23196354 -63481194 + (T)n Simple_repeat Simple_repeat 1 26 0 21 0 0 0 chr18 23196363 23196384 -63481164 + AT_rich Low_complexity Low_complexity 1 21 0 1133 282 111 7 chr18 23197413 23197817 -63479731 - MLT1J LTR MaLR -51 460 15 1490 148 5 0 chr18 23197959 23198176 -63479372 - AluSx SINE Alu -94 218 1 249 311 180 24 chr18 23199248 23199415 -63478133 + L2 LINE L2 2569 2761 -553 564 281 109 51 chr18 23200755 23201168 -63476380 + MLT1J2 LTR MaLR 1 437 -13 208 68 23 45 chr18 23201309 23201353 -63476195 + (TAA)n Simple_repeat Simple_repeat 2 44 0 2319 118 6 19 chr18 23201437 23201800 -63475748 - THE1B LTR MaLR -6 358 1 368 139 0 56 chr18 23201800 23201872 -63475676 + AluJ/FRAM SINE Alu 219 286 -16 186 43 0 0 chr18 23201872 23201895 -63475653 + (CTA)n Simple_repeat Simple_repeat 1 23 0 638 301 133 11 chr18 23201980 23202603 -63474945 - L2 LINE L2 -135 3178 2468 1105 282 114 15 chr18 23202607 23203071 -63474477 - L2 LINE L2 0 3313 2804 1043 169 0 21 chr18 23203095 23203284 -63474264 - AluSc SINE Alu -13 296 112 187 254 109 0 chr18 23203284 23203339 -63474209 - L2 LINE L2 -662 2652 2592 1558 301 75 12 chr18 23203422 23204077 -63473471 - L2 LINE L2 -899 2415 1720 309 26 0 0 chr18 23204290 23204328 -63473220 + (TG)n Simple_repeat Simple_repeat 2 39 0 271 225 14 0 chr18 23205228 23205299 -63472249 + (CTA)n Simple_repeat Simple_repeat 1 72 0 407 289 84 0 chr18 23205299 23205583 -63471965 + MER113 DNA MER1_type? 96 403 -118 300 165 72 72 chr18 23205584 23205681 -63471867 + L1MB5 LINE L1 6078 6174 0 280 250 121 14 chr18 23205976 23206116 -63471432 + MIR SINE MIR 70 224 -38 192 77 0 0 chr18 23206317 23206343 -63471205 + (GAA)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr18 23206912 23206940 -63470608 + AT_rich Low_complexity Low_complexity 1 28 0 4546 87 11 6 chr18 23207426 23208072 -63469476 + L1PB2 LINE L1 5503 6151 0 210 37 0 0 chr18 23209111 23209138 -63468410 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1595 173 62 0 chr18 23210054 23210326 -63467222 + AluJb SINE Alu 21 309 -3 1457 192 56 12 chr18 23210628 23210966 -63466582 + L1MB8 LINE L1 5826 6178 0 2050 129 16 13 chr18 23210976 23211286 -63466262 + AluSx SINE Alu 1 311 -1 507 134 0 0 chr18 23211286 23211368 -63466180 + (GA)n Simple_repeat Simple_repeat 1 82 0 229 174 0 22 chr18 23211464 23211510 -63466038 + MER21B LTR ERV1 21 65 -798 * 693 223 47 0 chr18 23211507 23211655 -63465893 + MER21B LTR ERV1 660 814 -49 508 321 80 39 chr18 23211991 23212427 -63465121 - L1M4 LINE L1 -1049 5097 4644 195 42 0 0 chr18 23212676 23212700 -63464848 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1587 200 0 7 chr18 23212702 23212972 -63464576 - AluJo SINE Alu -30 282 15 235 0 0 54 chr18 23212984 23213021 -63464527 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 2364 57 0 3 chr18 23213023 23213306 -63464242 - AluY SINE Alu -29 282 1 345 300 100 17 chr18 23213337 23213457 -63464091 + L2 LINE L2 3184 3313 0 184 257 0 0 chr18 23213904 23213939 -63463609 + MIR SINE MIR 222 256 -6 6562 83 3 4 chr18 23215545 23216533 -63461015 + L1PA10 LINE L1 5171 6157 -11 293 226 0 0 chr18 23216659 23216712 -63460836 - MIR SINE MIR -67 141 89 339 287 144 20 chr18 23217079 23217274 -63460274 - L1ME1 LINE L1 -241 5925 5707 1401 172 0 5 chr18 23218388 23218603 -63458945 + AluJb SINE Alu 79 292 -20 848 254 44 0 chr18 23218814 23219019 -63458529 + MIR SINE MIR 49 262 0 521 215 162 21 chr18 23219104 23219295 -63458253 - LTR16C LTR ERVL -3 488 271 1954 156 13 0 chr18 23219375 23219677 -63457871 - AluSx SINE Alu -6 306 1 953 136 6 45 chr18 23220602 23220779 -63456769 + MER44D DNA MER2_type 2 441 -168 48 102 0 0 chr18 23220825 23220992 -63456556 + AT_rich Low_complexity Low_complexity 1 167 0 290 102 0 0 chr18 23220993 23221042 -63456506 + MER44D DNA MER2_type 469 517 -88 1020 81 0 0 chr18 23221086 23221222 -63456326 + MER44D DNA MER2_type 469 604 -1 326 283 0 11 chr18 23221251 23221343 -63456205 + L1MC4 LINE L1 6613 6703 -1339 202 216 0 0 chr18 23221343 23221380 -63456168 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 201 132 0 0 chr18 23221674 23221712 -63455836 + (TC)n Simple_repeat Simple_repeat 1 38 0 444 323 157 0 chr18 23222449 23222672 -63454876 - MIR SINE MIR -2 260 3 2133 102 0 24 chr18 23222693 23222987 -63454561 + AluSg SINE Alu 5 291 -19 1634 182 106 3 chr18 23223245 23223574 -63453974 - MLT1A1 LTR MaLR 0 365 3 1969 106 42 39 chr18 23223927 23224239 -63453309 + AluSq SINE Alu 1 313 0 238 275 119 46 chr18 23224325 23224434 -63453114 - MIR SINE MIR -99 163 47 855 264 93 8 chr18 23225195 23225441 -63452107 - L2 LINE L2 0 3313 3047 299 339 94 11 chr18 23225870 23226050 -63451498 - MIR SINE MIR -14 248 54 524 211 70 31 chr18 23226076 23226204 -63451344 - MIR3 SINE MIR -27 181 49 691 272 86 17 chr18 23226323 23226617 -63450931 + L1ME3A LINE L1 4948 5296 -866 225 0 0 0 chr18 23226617 23226642 -63450906 + (TG)n Simple_repeat Simple_repeat 2 26 0 691 272 86 17 chr18 23226642 23226839 -63450709 + L1ME3A LINE L1 5296 5478 -684 261 184 0 0 chr18 23226847 23226896 -63450652 - MER116 DNA Mariner -5 75 27 279 241 74 19 chr18 23226909 23227017 -63450531 + L1ME3A LINE L1 5487 5600 -570 2228 123 7 0 chr18 23227042 23227344 -63450204 + AluSx SINE Alu 1 304 -8 329 215 155 32 chr18 23227451 23227670 -63449878 - MLT1H LTR MaLR -196 353 108 691 252 58 14 chr18 23227702 23227973 -63449575 + L1ME3A LINE L1 5571 5829 -341 180 0 0 0 chr18 23227973 23227993 -63449555 + (GA)n Simple_repeat Simple_repeat 1 20 0 691 252 58 14 chr18 23227993 23228231 -63449317 + L1ME3A LINE L1 5829 6161 -9 536 340 5 21 chr18 23228502 23228690 -63448858 - MER5A DNA MER1_type -3 186 2 423 262 16 24 chr18 23228857 23228983 -63448565 - L2 LINE L2 -4 3309 3185 4174 170 28 7 chr18 23229835 23230553 -63446995 - L1MB1 LINE L1 -1 6167 5435 22 35 0 0 chr18 23230623 23230652 -63446896 + AT_rich Low_complexity Low_complexity 1 29 0 451 325 0 38 chr18 23230688 23230848 -63446700 + MIR SINE MIR 29 182 -80 287 280 50 10 chr18 23230855 23230955 -63446593 + L1MC5 LINE L1 7009 7112 -849 414 0 0 0 chr18 23230955 23231001 -63446547 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 234 270 43 35 chr18 23231008 23231123 -63446425 + L1MC4 LINE L1 7139 7254 -788 937 234 68 96 chr18 23231274 23231865 -63445683 + L1MC5 LINE L1 7338 7911 -50 3876 98 0 0 chr18 23232177 23232700 -63444848 + L1P3 LINE L1 668 1190 -5271 2467 59 30 0 chr18 23232700 23233178 -63444370 + L1PA7 LINE L1 5834 6320 0 372 228 219 18 chr18 23233242 23233356 -63444192 - MER5A DNA MER1_type -6 183 47 197 281 78 86 chr18 23233344 23233472 -63444076 - L2 LINE L2 -98 3174 3048 * 2857 101 0 8 chr18 23234546 23234913 -63442635 + THE1B LTR MaLR 1 364 0 314 298 102 26 chr18 23235302 23235567 -63441981 + L2 LINE L2 1895 2179 -1135 294 77 0 77 chr18 23236016 23236068 -63441480 + MADE1 DNA Mariner 29 76 -4 1943 145 7 16 chr18 23236817 23237120 -63440428 - AluSx SINE Alu -9 303 4 332 303 114 101 chr18 23239064 23239361 -63438187 - L2 LINE L2 0 3272 2972 278 194 15 0 chr18 23239544 23239611 -63437937 + GA-rich Low_complexity Low_complexity 1 68 0 37 23 0 0 chr18 23241201 23241245 -63436303 + AT_rich Low_complexity Low_complexity 1 44 0 463 180 210 41 chr18 23244314 23244480 -63433068 + MLT1H LTR MaLR 396 592 -1 401 235 32 54 chr18 23245561 23245640 -63431908 + L1P5 LINE L1 5199 5278 -873 2088 146 0 0 chr18 23245640 23245941 -63431607 + AluSx SINE Alu 1 301 -11 401 235 32 54 chr18 23245941 23246129 -63431419 + L1P5 LINE L1 5278 5466 -685 * 2256 204 70 46 chr18 23246110 23246571 -63430977 + L1MDa LINE L1 21 500 -6040 2494 105 68 0 chr18 23246571 23246922 -63430626 + THE1C LTR MaLR 1 375 0 2256 204 70 46 chr18 23246922 23247048 -63430500 + L1MDa LINE L1 500 622 -5918 4183 210 83 25 chr18 23247060 23248094 -63429454 + L1MD2 LINE L1 5254 6347 -12 663 292 81 19 chr18 23248201 23248509 -63429039 + L1ME3A LINE L1 5580 5906 -264 21 36 0 0 chr18 23248718 23248746 -63428802 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr18 23248830 23248857 -63428691 + (TG)n Simple_repeat Simple_repeat 1 27 0 590 234 66 75 chr18 23248925 23249152 -63428396 - MIR SINE MIR -15 247 23 209 184 102 0 chr18 23249671 23249720 -63427828 - MIR SINE MIR -30 232 179 2197 109 3 7 chr18 23249830 23250132 -63427416 - AluSx SINE Alu -11 301 1 796 229 83 21 chr18 23251297 23251537 -63426011 + MIR SINE MIR 8 262 0 755 212 23 0 chr18 23251667 23251799 -63425749 - FLAM_A SINE Alu -2 140 6 572 316 34 19 chr18 23251949 23252155 -63425393 + MLT1L LTR MaLR 5 213 -402 595 285 49 42 chr18 23252224 23252508 -63425040 + MLT1L LTR MaLR 322 607 -8 1252 272 87 47 chr18 23252612 23252815 -63424733 + L2 LINE L2 2468 2661 -652 887 221 15 5 chr18 23252815 23253019 -63424529 - L1MB4 LINE L1 -6 6174 5969 1252 272 87 47 chr18 23253019 23253469 -63424079 + L2 LINE L2 2661 3152 -161 1676 153 68 7 chr18 23253482 23253789 -63423759 - L1MC3 LINE L1 -170 7615 7290 505 242 47 34 chr18 23253790 23253939 -63423609 + L2 LINE L2 3158 3308 -5 349 299 43 58 chr18 23255885 23256092 -63421456 - MIR SINE MIR -3 259 56 251 293 57 32 chr18 23257038 23257161 -63420387 - MIR SINE MIR -64 198 73 1446 200 56 56 chr18 23257171 23257561 -63419987 - MLT1B LTR MaLR 0 390 1 188 276 47 94 chr18 23257641 23257768 -63419780 + L2 LINE L2 2992 3112 -160 983 167 0 19 chr18 23258114 23258276 -63419272 - AluJb SINE Alu -14 298 140 2016 141 7 3 chr18 23258288 23258587 -63418961 - AluSx SINE Alu -12 300 1 199 333 137 12 chr18 23259403 23259571 -63417977 + L3 LINE CR1 1388 1576 -1 260 325 48 0 chr18 23260338 23260421 -63417127 + MIR SINE MIR 38 124 -138 305 315 44 44 chr18 23260451 23260654 -63416894 + L2 LINE L2 931 1133 -2181 4627 181 35 13 chr18 23262821 23263924 -63413624 - L1MB8 LINE L1 0 6178 5048 1290 216 8 41 chr18 23263923 23264285 -63413263 - L1MB8 LINE L1 -3532 2614 2265 * 1437 218 101 86 chr18 23264349 23264465 -63413083 + L1ME3A LINE L1 5625 5738 -432 2675 23 0 0 chr18 23264465 23264764 -63412784 - AluY SINE Alu -12 299 1 1437 218 101 86 chr18 23264764 23265133 -63412415 + L1ME3A LINE L1 5738 6117 -53 531 311 130 17 chr18 23265188 23265600 -63411948 + L1MC1 LINE L1 3609 4065 -2081 195 42 0 0 chr18 23265925 23265949 -63411599 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2401 177 21 14 chr18 23266724 23267147 -63410401 - MSTB LTR MaLR 0 426 1 398 306 147 34 chr18 23267383 23268006 -63409542 + L2 LINE L2 2617 3310 -3 5939 178 27 40 chr18 23268060 23270065 -63407483 + L1MC1 LINE L1 4353 6328 -5 243 0 0 0 chr18 23270421 23270448 -63407100 + (T)n Simple_repeat Simple_repeat 1 27 0 180 0 0 0 chr18 23270592 23270612 -63406936 + (A)n Simple_repeat Simple_repeat 1 20 0 523 248 18 0 chr18 23271130 23271239 -63406309 + MER81 DNA DNA 1 111 -3 204 207 172 35 chr18 23271271 23271358 -63406190 + MIR SINE MIR 48 146 -62 2537 104 31 0 chr18 23271484 23271840 -63405708 + L1PA16 LINE L1 5419 5785 -381 7042 93 9 0 chr18 23271840 23274157 -63403391 + L1PA13 LINE L1 3772 6159 -4 2336 107 26 14 chr18 23274157 23274503 -63403045 + L1PA16 LINE L1 5777 6126 -40 899 101 0 0 chr18 23274603 23274722 -63402826 - AluSq/x SINE Alu -194 119 1 26 0 0 0 chr18 23274935 23274961 -63402587 + AT_rich Low_complexity Low_complexity 1 26 0 357 274 8 34 chr18 23274973 23275090 -63402458 + MIR SINE MIR 34 147 -115 27 0 0 0 chr18 23276491 23276518 -63401030 + AT_rich Low_complexity Low_complexity 1 27 0 212 313 150 7 chr18 23277078 23277225 -63400323 + MIR3 SINE MIR 6 173 -35 523 312 136 38 chr18 23277397 23277794 -63399754 + L2 LINE L2 2877 3312 -1 198 0 0 0 chr18 23277875 23277897 -63399651 + (A)n Simple_repeat Simple_repeat 1 22 0 1648 156 27 23 chr18 23278051 23278352 -63399196 - AluJo SINE Alu -10 302 1 217 345 9 9 chr18 23278436 23278546 -63399002 + MIR SINE MIR 77 186 -76 1034 217 84 69 chr18 23278592 23278924 -63398624 + MER46C DNA MER2_type 1 337 -1 390 340 98 10 chr18 23279870 23280073 -63397475 + MIR SINE MIR 16 236 -26 214 250 188 10 chr18 23281184 23281280 -63396268 - MIR SINE MIR -126 136 24 213 211 0 0 chr18 23281439 23281477 -63396071 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 381 22 0 0 chr18 23281494 23281540 -63396008 + (CA)n Simple_repeat Simple_repeat 1 46 0 208 135 27 0 chr18 23282020 23282057 -63395491 + L3 LINE CR1 1230 1267 -310 180 0 0 0 chr18 23282979 23282999 -63394549 + (CAAAC)n Simple_repeat Simple_repeat 2 21 0 299 266 91 28 chr18 23283525 23283668 -63393880 + MIR SINE MIR 29 180 -82 2179 83 48 0 chr18 23284789 23285079 -63392469 + AluY SINE Alu 1 304 -7 285 246 59 100 chr18 23285345 23285666 -63391882 + L1MC/D LINE L1 2722 3029 -3117 356 280 93 39 chr18 23285760 23286017 -63391531 + L1MC/D LINE L1 4398 4668 -1478 956 259 65 64 chr18 23286538 23287118 -63390430 + L1MEd LINE L1 532 1112 -5007 302 275 44 22 chr18 23287229 23287320 -63390228 + HAL1 LINE L1 1364 1456 -1051 22 0 0 0 chr18 23287746 23287768 -63389780 + AT_rich Low_complexity Low_complexity 1 22 0 183 42 0 0 chr18 23287937 23287961 -63389587 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1109 280 85 6 chr18 23287964 23288328 -63389220 + L1MC/D LINE L1 5370 5762 -2046 750 218 64 60 chr18 23289174 23289408 -63388140 + MER106A DNA MER1_type 1 235 -1 441 295 63 66 chr18 23289408 23289627 -63387921 + L2 LINE L2 2293 2514 -800 2348 125 33 41 chr18 23289627 23289994 -63387554 - THE1B LTR MaLR 0 364 1 441 295 63 66 chr18 23289994 23290191 -63387357 + L2 LINE L2 2514 2710 -604 318 389 67 27 chr18 23290660 23291035 -63386513 - L2 LINE L2 -32 3281 2892 357 255 128 0 chr18 23292219 23292313 -63385235 + L2 LINE L2 3203 3308 -5 360 284 94 8 chr18 23292329 23292456 -63385092 - MIR3 SINE MIR -49 159 22 511 107 27 0 chr18 23293503 23293578 -63383970 - Tigger7 DNA MER2_type -23 2464 2388 * 1480 176 47 0 chr18 23293575 23293830 -63383718 - Tigger7 DNA MER2_type -2220 267 1 1831 164 29 61 chr18 23293857 23294234 -63383314 + MLT1A1 LTR MaLR 1 365 0 1222 149 5 0 chr18 23294277 23294485 -63383063 - L1M1 LINE L1 -7294 271 63 24 0 0 0 chr18 23294700 23294724 -63382824 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr18 23295899 23295927 -63381621 + (CA)n Simple_repeat Simple_repeat 1 28 0 764 287 35 57 chr18 23298521 23298925 -63378623 - LTR16C LTR ERVL -96 395 1 190 297 158 89 chr18 23299066 23299312 -63378236 + L2 LINE L2 3009 3271 -1 1056 191 62 14 chr18 23300064 23300273 -63377275 - MER20 DNA MER1_type 0 219 1 199 300 20 0 chr18 23300405 23300455 -63377093 - L2 LINE L2 -26 3287 3237 307 331 34 54 chr18 23300471 23300619 -63376929 - MIR3 SINE MIR -61 147 3 799 240 16 16 chr18 23301033 23301216 -63376332 + MER58C DNA MER1_type 11 193 -22 1540 189 32 4 chr18 23301282 23301562 -63375986 + AluJb SINE Alu 1 288 -24 1448 241 80 12 chr18 23301756 23302167 -63375381 - MLT1J1 LTR MaLR -6 440 2 4263 188 53 46 chr18 23302289 23303173 -63374375 + L1MA4A LINE L1 2 891 -5958 1843 117 18 4 chr18 23303167 23303448 -63374100 - L1M2 LINE L1 -4338 2511 2227 * 534 194 93 0 chr18 23303445 23303574 -63373974 + L1MA4A LINE L1 2096 2236 -4613 * 16172 165 21 7 chr18 23303572 23307690 -63369858 + L1MA4A LINE L1 2497 6688 -317 3222 145 23 4 chr18 23307690 23308167 -63369381 + MER66B LTR ERV1 1 486 0 16172 165 21 7 chr18 23308167 23308485 -63369063 + L1MA4A LINE L1 6688 7000 -5 410 268 57 19 chr18 23309432 23309589 -63367959 - L1ME4a LINE L1 -4 6117 5955 23 33 0 0 chr18 23309624 23309654 -63367894 + AT_rich Low_complexity Low_complexity 1 30 0 363 233 56 0 chr18 23309696 23309786 -63367762 + L2 LINE L2 2622 2716 -598 300 206 76 11 chr18 23309794 23309886 -63367662 - L1ME4a LINE L1 -60 6061 5964 191 236 0 45 chr18 23310553 23310642 -63366906 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 270 268 12 0 chr18 23310665 23310747 -63366801 + (TA)n Simple_repeat Simple_repeat 2 84 0 349 281 190 24 chr18 23310827 23311122 -63366426 - L2 LINE L2 -670 2644 2301 307 319 118 17 chr18 23311396 23311515 -63366033 - L2 LINE L2 0 3272 3142 183 352 23 11 chr18 23312062 23312150 -63365398 + MIR SINE MIR 59 147 -115 274 368 69 17 chr18 23312470 23312644 -63364904 + MIR3 SINE MIR 10 192 -16 248 333 13 65 chr18 23312796 23312949 -63364599 + MIR SINE MIR 3 147 -115 185 0 0 39 chr18 23313146 23313172 -63364376 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 1580 189 33 26 chr18 23313177 23313483 -63364065 - AluJo SINE Alu -2 310 3 255 250 47 0 chr18 23313526 23313590 -63363958 + MIR3 SINE MIR 110 176 -32 441 256 57 74 chr18 23313596 23313772 -63363776 - MARNA DNA Mariner -374 212 40 180 250 0 0 chr18 23315658 23315694 -63361854 + L2 LINE L2 3267 3302 -11 508 314 0 0 chr18 23315822 23315962 -63361586 + MIR3 SINE MIR 61 200 -8 24 0 0 0 chr18 23316553 23316577 -63360971 + AT_rich Low_complexity Low_complexity 1 24 0 1873 209 17 92 chr18 23316579 23317085 -63360463 - L1MA9 LINE L1 -40 6272 5831 396 0 0 0 chr18 23317085 23317129 -63360419 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 1873 209 17 92 chr18 23317129 23317347 -63360201 - L1MA9 LINE L1 -481 5831 5598 1184 198 5 0 chr18 23317350 23317552 -63359996 - AluJb SINE Alu -23 289 87 782 216 12 0 chr18 23317553 23317715 -63359833 - L1MA9 LINE L1 -707 5605 5442 206 279 0 0 chr18 23318333 23318394 -63359154 + (CA)n Simple_repeat Simple_repeat 1 61 0 526 267 56 28 chr18 23318553 23318733 -63358815 - MIR3 SINE MIR -7 201 17 459 52 0 0 chr18 23318882 23318940 -63358608 + (CA)n Simple_repeat Simple_repeat 1 58 0 5129 214 64 28 chr18 23321133 23321308 -63356240 + L1MD1 LINE L1 2179 2346 -3896 3261 59 8 0 chr18 23321308 23321696 -63355852 - L1PA8 LINE L1 0 6172 5782 5129 214 64 28 chr18 23321696 23324235 -63353313 + L1MD1 LINE L1 2346 5106 -1136 1798 150 7 46 chr18 23324235 23324542 -63353006 + AluSx SINE Alu 2 296 -16 5129 214 64 28 chr18 23324542 23325721 -63351827 + L1MD1 LINE L1 5106 6242 0 3518 213 65 41 chr18 23325701 23326089 -63351459 + L1ME1 LINE L1 4356 4733 -1433 * 2237 89 0 42 chr18 23326089 23326402 -63351146 + AluY SINE Alu 1 300 -11 3518 213 65 41 chr18 23326402 23327772 -63349776 + L1ME1 LINE L1 4733 6150 -16 551 218 55 36 chr18 23327779 23327944 -63349604 + L1ME4a LINE L1 4946 5113 -1033 257 284 53 0 chr18 23328004 23328099 -63349449 + MER5B DNA MER1_type 1 100 -78 197 281 125 31 chr18 23328275 23328339 -63349209 - L2 LINE L2 -33 3239 3170 510 61 0 0 chr18 23329236 23329302 -63348246 + (TAGA)n Simple_repeat Simple_repeat 2 67 0 225 226 0 0 chr18 23330229 23330282 -63347266 + L2 LINE L2 3261 3313 0 278 347 56 0 chr18 23330417 23330561 -63346987 - MIR SINE MIR -48 214 63 345 372 135 25 chr18 23330928 23331202 -63346346 + L2 LINE L2 2969 3272 0 263 365 41 21 chr18 23331448 23331593 -63345955 + L2 LINE L2 3125 3272 0 457 294 120 42 chr18 23331671 23332096 -63345452 + L1ME4a LINE L1 5632 6089 -32 2408 92 0 0 chr18 23332104 23332409 -63345139 - AluY SINE Alu -5 306 2 1634 258 36 18 chr18 23332445 23332894 -63344654 + L1MEc LINE L1 34 490 -5906 4025 228 19 69 chr18 23332920 23333164 -63344384 - L1M4 LINE L1 -2652 3992 3737 192 40 0 0 chr18 23333164 23333189 -63344359 + (CA)n Simple_repeat Simple_repeat 1 25 0 4025 228 19 69 chr18 23333189 23333503 -63344045 - L1M4 LINE L1 -2907 3737 3409 1827 134 0 11 chr18 23333503 23333778 -63343770 + L1PA15 LINE L1 5889 6160 -5 4025 228 19 69 chr18 23333778 23334786 -63342762 - L1M4 LINE L1 -3235 3409 2484 2601 240 86 50 chr18 23334861 23335616 -63341932 - L1M4 LINE L1 -4551 2095 1369 2164 130 24 56 chr18 23335616 23335992 -63341556 - THE1B LTR MaLR 0 364 1 2601 240 86 50 chr18 23335992 23336614 -63340934 - L1M4 LINE L1 -5277 1369 771 186 43 0 0 chr18 23336614 23336637 -63340911 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 2601 240 86 50 chr18 23336637 23337098 -63340450 - L1M4 LINE L1 -5875 771 76 7113 162 7 2 chr18 23337102 23339442 -63338106 - L1PA13 LINE L1 0 7601 5210 1069 139 13 0 chr18 23339442 23339600 -63337948 - L1P4 LINE L1 -381 5785 5626 * 1549 102 4 0 chr18 23339596 23339821 -63337727 - L1P4 LINE L1 -817 5329 5104 9874 154 36 15 chr18 23339832 23341595 -63335953 - L1PA13 LINE L1 -4964 2620 8 462 254 36 59 chr18 23341679 23341899 -63335649 - L1MC4a LINE L1 -1863 5945 5731 369 255 26 157 chr18 23341929 23342196 -63335352 - MIR3 SINE MIR -26 236 2 23 33 0 0 chr18 23342667 23342697 -63334851 + AT_rich Low_complexity Low_complexity 1 30 0 990 178 5 16 chr18 23342833 23343024 -63334524 + MER53 DNA DNA 1 189 0 315 24 48 0 chr18 23344005 23344047 -63333501 - L1PA7 LINE L1 -3 6151 6108 25 65 0 0 chr18 23344539 23344585 -63332963 + AT_rich Low_complexity Low_complexity 1 46 0 256 264 143 0 chr18 23344752 23344843 -63332705 - MIR SINE MIR -84 178 75 1797 107 8 0 chr18 23345850 23346102 -63331446 + L1MA1 LINE L1 6049 6302 0 30 59 0 0 chr18 23348195 23348246 -63329302 + AT_rich Low_complexity Low_complexity 1 51 0 2376 96 3 6 chr18 23348734 23349046 -63328502 + AluSq SINE Alu 1 311 -2 361 337 38 31 chr18 23349487 23349748 -63327800 - L2 LINE L2 -1021 2293 2031 710 161 9 0 chr18 23349928 23350040 -63327508 + FLAM_A SINE Alu 20 132 -10 353 263 38 114 chr18 23351107 23351293 -63326255 + MIR SINE MIR 13 186 -63 222 291 0 0 chr18 23351592 23351647 -63325901 - MIR SINE MIR -157 105 51 2200 114 0 10 chr18 23352049 23352356 -63325192 + AluSx SINE Alu 1 304 -8 1859 130 7 17 chr18 23352878 23353170 -63324378 + AluSx SINE Alu 1 289 -23 1692 185 3 3 chr18 23353339 23353649 -63323899 + AluJo SINE Alu 1 312 0 2130 94 42 0 chr18 23354613 23354901 -63322647 + AluSg SINE Alu 11 310 0 186 133 0 0 chr18 23355063 23355093 -63322455 + (T)n Simple_repeat Simple_repeat 1 30 0 43806 34 21 1 chr18 23355240 23361310 -63316238 + L1PA2 LINE L1 1 6190 0 1614 136 80 46 chr18 23361602 23361904 -63315644 - AluJb SINE Alu 0 312 1 205 171 0 0 chr18 23362150 23362185 -63315363 + T-rich Low_complexity Low_complexity 1 35 0 321 100 0 0 chr18 23362715 23362765 -63314783 + (TG)n Simple_repeat Simple_repeat 2 51 0 386 264 208 11 chr18 23363612 23363663 -63313885 - MIR SINE MIR -14 248 208 180 0 0 0 chr18 23363663 23363683 -63313865 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 386 264 208 11 chr18 23363683 23363809 -63313739 - MIR SINE MIR -54 208 36 563 375 49 0 chr18 23364455 23364679 -63312869 - MIR SINE MIR -14 248 14 25 31 0 0 chr18 23365716 23365748 -63311800 + AT_rich Low_complexity Low_complexity 1 32 0 386 301 75 7 chr18 23365769 23365915 -63311633 + MIR SINE MIR 48 203 -59 2358 121 44 8 chr18 23365915 23366278 -63311270 - MLT1B LTR MaLR 0 390 15 2350 79 10 0 chr18 23366532 23366824 -63310724 + AluY SINE Alu 1 295 -16 1827 159 7 13 chr18 23368545 23368846 -63308702 + AluJo SINE Alu 1 299 -13 264 77 0 0 chr18 23372964 23373003 -63304545 + (TG)n Simple_repeat Simple_repeat 1 39 0 300 111 0 0 chr18 23374209 23374254 -63303294 + (A)n Simple_repeat Simple_repeat 1 45 0 315 319 86 0 chr18 23374377 23374493 -63303055 + MIR SINE MIR 64 189 -73 * 505 295 145 53 chr18 23374490 23375302 -63302246 + L2 LINE L2 2194 3112 -160 224 317 0 0 chr18 23375797 23375857 -63301691 + T-rich Low_complexity Low_complexity 2 61 0 305 248 103 26 chr18 23376127 23376244 -63301304 + L2 LINE L2 3144 3269 -3 261 320 168 0 chr18 23376340 23376465 -63301083 + L2 LINE L2 3118 3263 -9 35 92 0 0 chr18 23376839 23376937 -63300611 + AT_rich Low_complexity Low_complexity 1 98 0 256 283 0 0 chr18 23377398 23377458 -63300090 + T-rich Low_complexity Low_complexity 5 64 0 1708 165 92 6 chr18 23378766 23379112 -63298436 + L1MB8 LINE L1 5798 6173 -5 308 218 77 0 chr18 23379241 23379319 -63298229 + L2 LINE L2 3224 3307 -6 187 98 82 0 chr18 23379415 23379476 -63298072 + (TA)n Simple_repeat Simple_repeat 1 66 0 199 213 227 0 chr18 23379514 23379589 -63297959 - MIR SINE MIR -2 260 169 435 115 26 26 chr18 23379764 23379842 -63297706 - AluJ/FRAM SINE Alu -3 309 232 386 221 82 49 chr18 23382001 23382123 -63295425 - MIR SINE MIR -63 145 20 2148 151 35 28 chr18 23382213 23382254 -63295294 - L1MB3 LINE L1 -9 6174 6135 1979 131 0 14 chr18 23382254 23382551 -63294997 - AluSg SINE Alu -17 293 1 2148 151 35 28 chr18 23382551 23382892 -63294656 - L1MB3 LINE L1 -48 6135 5786 339 44 0 0 chr18 23382892 23382937 -63294611 + (TG)n Simple_repeat Simple_repeat 2 46 0 2148 151 35 28 chr18 23382937 23382985 -63294563 - L1MB3 LINE L1 -397 5786 5740 21 0 0 0 chr18 23383006 23383027 -63294521 + AT_rich Low_complexity Low_complexity 1 21 0 226 273 55 0 chr18 23383204 23383259 -63294289 + L2 LINE L2 3248 3305 -8 1475 183 17 52 chr18 23383335 23383680 -63293868 - L1MA9 LINE L1 -83 6229 5897 558 289 75 97 chr18 23383789 23384335 -63293213 - LTR67 LTR ERVL -1 556 23 508 227 28 28 chr18 23385672 23385813 -63291735 - MER117 DNA MER1_type -56 141 1 3707 244 115 58 chr18 23386680 23388814 -63288734 - HAL1 LINE L1 -4 2503 249 2425 169 42 2 chr18 23389075 23389524 -63288024 - MLT1C LTR MaLR 0 467 1 225 0 0 0 chr18 23389874 23389899 -63287649 + (TATG)n Simple_repeat Simple_repeat 4 28 0 28 0 0 0 chr18 23389981 23390009 -63287539 + AT_rich Low_complexity Low_complexity 1 28 0 882 278 15 22 chr18 23390707 23391031 -63286517 - L1ME4a LINE L1 -202 5919 5598 300 299 83 0 chr18 23391116 23391273 -63286275 - L1ME4a LINE L1 -1520 4626 4457 1660 160 17 14 chr18 23391614 23391901 -63285647 + AluJo SINE Alu 1 288 -24 356 226 90 98 chr18 23392123 23392357 -63285191 - Charlie8 DNA MER1_type -2146 271 40 2520 57 0 0 chr18 23392486 23392784 -63284764 + AluY SINE Alu 1 298 -13 331 303 98 78 chr18 23393144 23393622 -63283926 - L1ME4a LINE L1 -2697 3449 2949 2290 111 0 0 chr18 23393622 23393928 -63283620 - AluSg1 SINE Alu -1 308 3 331 303 98 78 chr18 23393928 23394195 -63283353 - L1ME4a LINE L1 -3197 2949 2689 21 0 0 0 chr18 23394408 23394429 -63283119 + AT_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr18 23394617 23394640 -63282908 + (TA)n Simple_repeat Simple_repeat 1 23 0 339 351 40 10 chr18 23394654 23394856 -63282692 - HAL1b LINE L1 -699 649 442 2391 258 79 47 chr18 23395221 23395259 -63282289 - L1ME3 LINE L1 -21 6141 6106 3714 49 8 6 chr18 23395259 23395728 -63281820 - L1PA7 LINE L1 -3 6151 5682 2391 258 79 47 chr18 23395728 23396911 -63280637 - L1ME3 LINE L1 -56 6106 4861 610 164 8 8 chr18 23396937 23397071 -63280477 - L1MA4 LINE L1 -4 6296 6163 2145 76 17 7 chr18 23398205 23398493 -63279055 + AluY SINE Alu 1 291 -20 1308 225 14 51 chr18 23398843 23399256 -63278292 - L1ME3 LINE L1 -1292 4854 4457 25 95 0 0 chr18 23399316 23399390 -63278158 + AT_rich Low_complexity Low_complexity 1 74 0 1223 282 75 34 chr18 23399424 23400049 -63277499 - L1ME4a LINE L1 -158 5963 5313 2257 121 0 0 chr18 23400311 23400609 -63276939 + AluSx SINE Alu 1 298 -14 703 234 36 16 chr18 23401026 23401218 -63276330 + HAL1b LINE L1 381 576 -772 632 138 8 0 chr18 23401378 23401508 -63276040 + (TAGA)n Simple_repeat Simple_repeat 2 132 0 333 47 0 0 chr18 23402783 23402826 -63274722 + (CA)n Simple_repeat Simple_repeat 2 44 0 337 286 14 56 chr18 23402831 23403044 -63274504 + HAL1b LINE L1 684 887 -461 312 286 73 47 chr18 23403851 23404043 -63273505 + L1M4 LINE L1 2322 2518 -3628 347 329 70 26 chr18 23404989 23405448 -63272100 + L1M4 LINE L1 2557 3035 -3111 1746 132 21 3 chr18 23405475 23405764 -63271784 + L1PA10 LINE L1 5875 6168 0 450 298 143 50 chr18 23405913 23406724 -63270824 + L2 LINE L2 2194 3112 -160 224 317 0 0 chr18 23407219 23407279 -63270269 + T-rich Low_complexity Low_complexity 2 61 0 290 248 103 26 chr18 23407549 23407666 -63269882 + L2 LINE L2 3144 3269 -3 1818 227 82 14 chr18 23407735 23408224 -63269324 - L2 LINE L2 -463 2851 2330 803 224 43 5 chr18 23408224 23408434 -63269114 - L2 LINE L2 -1212 2102 1885 25 51 0 0 chr18 23410974 23411013 -63266535 + AT_rich Low_complexity Low_complexity 1 39 0 596 241 138 20 chr18 23411046 23411241 -63266307 + MIR SINE MIR 45 262 0 226 311 90 0 chr18 23411389 23411511 -63266037 - L1MC4 LINE L1 -2 8040 7908 531 299 5 14 chr18 23411617 23411824 -63265724 - L1MC4 LINE L1 -131 7911 7707 259 310 20 0 chr18 23412102 23412202 -63265346 - L1ME LINE L1 -502 5619 5518 267 335 26 0 chr18 23412601 23412753 -63264795 + L1ME LINE L1 5726 5881 -240 238 355 132 51 chr18 23414396 23414963 -63262585 - L2 LINE L2 -377 2937 2325 463 231 27 88 chr18 23415280 23415427 -63262121 - MIR SINE MIR -15 247 110 1360 157 68 0 chr18 23415596 23415889 -63261659 + Charlie5 DNA MER1_type 2234 2546 -66 21602 37 1 0 chr18 23465889 23469141 -63208407 + L1PA5 LINE L1 2898 6149 -5 1278 207 59 8 chr18 23469264 23469710 -63207838 + MLT1E3 LTR MaLR 1 508 -116 3970 173 64 3 chr18 23469771 23470539 -63207009 + L1MB7 LINE L1 5365 6179 -5 1130 246 57 38 chr18 23470543 23470900 -63206648 + L1ME LINE L1 841 1190 -4890 1507 196 49 7 chr18 23470900 23471185 -63206363 + AluJo SINE Alu 1 297 -15 1130 246 57 38 chr18 23471185 23471485 -63206063 + L1ME LINE L1 1190 2691 -3389 7328 57 15 0 chr18 23471491 23473023 -63204525 + L1PA7 LINE L1 4637 6154 0 2092 168 45 38 chr18 23473168 23473407 -63204141 - MSTB LTR MaLR 0 426 181 3784 118 35 0 chr18 23473407 23473916 -63203632 - MER1A DNA MER1_type 0 527 1 2092 168 45 38 chr18 23473916 23474099 -63203449 - MSTB LTR MaLR -245 181 1 9557 162 26 11 chr18 23474099 23475725 -63201823 - MSTB-int LTR MaLR 0 1651 2 2589 150 33 19 chr18 23475727 23475763 -63201785 - MSTB LTR MaLR -1 425 391 1970 153 3 0 chr18 23475763 23476057 -63201491 + AluSx SINE Alu 1 295 -17 2589 150 33 19 chr18 23476057 23476439 -63201109 - MSTB LTR MaLR -35 391 1 3762 246 44 46 chr18 23476483 23476895 -63200653 + L2 LINE L2 1789 2200 -1113 655 243 16 54 chr18 23476895 23477080 -63200468 - MER5B DNA MER1_type 0 178 1 3762 246 44 46 chr18 23477080 23478197 -63199351 + L2 LINE L2 2200 3312 -1 213 154 0 0 chr18 23478692 23478731 -63198817 + (TG)n Simple_repeat Simple_repeat 2 40 0 1778 99 4 0 chr18 23480331 23480564 -63196984 - AluSc SINE Alu -19 290 57 458 267 129 19 chr18 23480826 23481036 -63196512 + L1ME LINE L1 11 243 -6616 294 301 40 57 chr18 23481060 23481236 -63196312 + L1ME LINE L1 768 940 -5915 1518 239 21 15 chr18 23481237 23481717 -63195831 + L1ME LINE L1 4016 4498 -2459 * 3134 214 60 22 chr18 23481701 23482424 -63195124 + L1MB8 LINE L1 5427 6176 -2 353 200 24 59 chr18 23482454 23482539 -63195009 + L2 LINE L2 3191 3272 0 227 310 90 30 chr18 23482730 23482930 -63194618 + HAL1b LINE L1 406 617 -731 399 188 12 0 chr18 23482930 23483015 -63194533 - MLT1I LTR MaLR -2 407 322 345 301 0 30 chr18 23483123 23483256 -63194292 - MLT1I LTR MaLR -249 160 32 555 222 57 62 chr18 23483256 23483432 -63194116 + L1MDb LINE L1 129 303 -6106 609 270 137 15 chr18 23483544 23483687 -63193861 - MLT1J2 LTR MaLR -143 307 183 303 93 0 0 chr18 23483687 23483730 -63193818 + (CA)n Simple_repeat Simple_repeat 1 43 0 609 270 137 15 chr18 23483730 23483849 -63193699 - MLT1J2 LTR MaLR -267 183 13 470 341 51 53 chr18 23484016 23484585 -63192963 + L1ME LINE L1 4961 5528 -1429 2000 226 38 29 chr18 23484623 23485102 -63192446 - MLT1D LTR MaLR 0 505 23 760 252 88 31 chr18 23485207 23486228 -63191320 + L1ME LINE L1 5626 6621 -311 480 241 66 118 chr18 23487265 23487688 -63189860 + MLT1K LTR MaLR 188 588 0 859 241 14 14 chr18 23487744 23487960 -63189588 + MIR SINE MIR 47 262 0 30 45 0 0 chr18 23487981 23488025 -63189523 + AT_rich Low_complexity Low_complexity 1 44 0 461 308 133 0 chr18 23488067 23488278 -63189270 - MIR SINE MIR -3 259 21 1216 276 64 10 chr18 23488488 23488897 -63188651 + MLT2F LTR ERVL 4 434 -229 1015 292 23 12 chr18 23488905 23489247 -63188301 - L1ME3A LINE L1 -296 5874 5529 * 1301 289 59 45 chr18 23489241 23489949 -63187599 - L1ME3A LINE L1 -905 5241 4524 2854 193 35 16 chr18 23490020 23490652 -63186896 + L1MC4a LINE L1 7160 7803 -5 1053 286 70 24 chr18 23490674 23491376 -63186172 - L1ME3A LINE L1 -2493 3653 2920 2163 119 0 0 chr18 23491377 23491671 -63185877 + AluSx SINE Alu 1 294 -18 1826 172 0 0 chr18 23492289 23492585 -63184963 + AluJo SINE Alu 16 311 -1 206 118 0 29 chr18 23492585 23492619 -63184929 + (GA)n Simple_repeat Simple_repeat 1 33 0 570 29 0 0 chr18 23492620 23492688 -63184860 + (GGAA)n Simple_repeat Simple_repeat 1 68 0 2240 52 0 75 chr18 23493984 23494329 -63183219 + AluY SINE Alu 1 322 0 1383 109 9 55 chr18 23495161 23495251 -63182297 - MER2 DNA MER2_type -135 210 117 2139 139 0 0 chr18 23495251 23495553 -63181995 + AluSx SINE Alu 1 302 -10 1383 109 9 55 chr18 23495553 23495682 -63181866 - MER2 DNA MER2_type -228 117 1 225 233 0 0 chr18 23497611 23497654 -63179894 + 5S rRNA rRNA 1 43 -78 233 226 81 0 chr18 23498076 23498138 -63179410 - L3 LINE CR1 -8 1569 1503 23 0 0 0 chr18 23498159 23498182 -63179366 + AT_rich Low_complexity Low_complexity 1 23 0 451 327 26 0 chr18 23498187 23498340 -63179208 + MIR3 SINE MIR 49 205 -3 4179 137 42 30 chr18 23498354 23499085 -63178463 + Tigger2 DNA MER2_type 5 744 -1974 2237 78 7 3 chr18 23499315 23499609 -63177939 - AluSc SINE Alu -14 295 1 1532 121 30 0 chr18 23499609 23499840 -63177708 + Tigger2 DNA MER2_type 2480 2717 -1 2394 81 0 0 chr18 23500322 23500618 -63176930 + AluSg SINE Alu 1 296 -14 192 40 0 0 chr18 23501643 23501668 -63175880 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 727 140 0 0 chr18 23501825 23501932 -63175616 + U6 snRNA snRNA 1 107 0 712 51 51 0 chr18 23501934 23502032 -63175516 + L1PA11 LINE L1 6072 6174 0 7560 30 0 1 chr18 23502136 23503663 -63173885 - L1PA3 LINE L1 0 6155 4629 2482 82 0 0 chr18 23503690 23503994 -63173554 + AluSx SINE Alu 3 306 -6 381 307 57 5 chr18 23503997 23504219 -63173329 + L1MC4a LINE L1 5613 5824 -297 4963 189 39 19 chr18 23504424 23506495 -63171053 - L1MB7 LINE L1 -9 6175 4064 419 214 10 0 chr18 23506493 23506591 -63170957 - L1MEc LINE L1 -4071 2325 2227 * 210 259 17 0 chr18 23506591 23506649 -63170899 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 6122 251 45 45 chr18 23506650 23508085 -63169463 - L1MEc LINE L1 -4150 2246 811 2320 99 3 3 chr18 23508085 23508389 -63169159 - AluSp SINE Alu -9 304 1 6122 251 45 45 chr18 23508389 23509162 -63168386 - L1MEc LINE L1 -5585 811 39 1127 267 98 69 chr18 23509205 23509743 -63167805 - MLT1G1 LTR MaLR 0 595 1 1359 276 139 18 chr18 23509747 23510553 -63166995 - HAL1 LINE L1 -1581 926 1 2374 84 0 0 chr18 23510858 23511157 -63166391 + AluY SINE Alu 1 299 -12 534 274 20 0 chr18 23511561 23511707 -63165841 - L1MC5 LINE L1 -69 7892 7744 2422 137 32 24 chr18 23511822 23512318 -63165230 - L1PA15-16 LINE L1 -4582 2267 1768 12105 223 23 41 chr18 23512334 23514523 -63163025 + L1 LINE L1 1610 3836 -2310 12261 27 0 0 chr18 23514523 23516767 -63160781 + L1PA3 LINE L1 3936 6182 0 12105 223 23 41 chr18 23516767 23517430 -63160118 + L1 LINE L1 3836 4398 -1748 324 0 0 0 chr18 23517430 23517466 -63160082 + (CA)n Simple_repeat Simple_repeat 1 36 0 12105 223 23 41 chr18 23517466 23518201 -63159347 + L1 LINE L1 4398 5144 -1002 5608 105 11 13 chr18 23518201 23519063 -63158485 - L1PA13 LINE L1 -1 6162 5273 2032 146 133 16 chr18 23519063 23519446 -63158102 + MSTA LTR MaLR 1 428 0 5608 105 11 13 chr18 23519446 23520013 -63157535 - L1PA13 LINE L1 -890 5273 4707 500 29 112 16 chr18 23520021 23520263 -63157285 + (TA)n Simple_repeat Simple_repeat 1 265 0 2055 171 5 3 chr18 23520263 23520637 -63156911 + L1PB4 LINE L1 5782 6156 0 342 284 12 0 chr18 23520941 23521022 -63156526 + L2 LINE L2 3191 3272 0 321 194 15 0 chr18 23522722 23522789 -63154759 + MIR SINE MIR 66 133 -75 1381 278 65 33 chr18 23523034 23523600 -63153948 - L2 LINE L2 0 3313 2707 2477 72 0 0 chr18 23523600 23523907 -63153641 + AluY SINE Alu 1 307 -4 1381 278 65 33 chr18 23523907 23524175 -63153373 - L2 LINE L2 -606 2707 2449 290 310 47 8 chr18 23524214 23524343 -63153205 - HERVL LTR ERVL -1666 3988 3855 3862 245 56 23 chr18 23524561 23525712 -63151836 - L1MCb LINE L1 -4851 1194 6 311 285 91 32 chr18 23525743 23525996 -63151552 + L1M4 LINE L1 4500 4767 -1379 418 317 40 43 chr18 23526286 23526611 -63150937 - L1M4 LINE L1 -3049 3097 2774 300 356 56 19 chr18 23526618 23526778 -63150770 + HAL1 LINE L1 1546 1711 -796 2263 182 86 33 chr18 23526912 23526957 -63150591 - MLT2B1 LTR ERVL 0 520 479 2700 128 4 46 chr18 23526957 23527410 -63150138 + Tigger2a DNA MER2_type 1 434 0 2263 182 86 33 chr18 23527410 23527853 -63149695 - MLT2B1 LTR ERVL -41 479 6 21 57 0 0 chr18 23527990 23528025 -63149523 + AT_rich Low_complexity Low_complexity 1 35 0 183 42 0 0 chr18 23528094 23528118 -63149430 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 196 183 17 17 chr18 23528118 23528178 -63149370 + GA-rich Low_complexity Low_complexity 3 62 0 1585 225 44 36 chr18 23529099 23529233 -63148315 + MER110A LTR ERV1 1 132 -359 2658 184 26 2 chr18 23529233 23529694 -63147854 + MER70A LTR ERVL 1 472 0 1585 225 44 36 chr18 23529694 23530066 -63147482 + MER110A LTR ERV1 132 491 0 3194 209 35 8 chr18 23530069 23530724 -63146824 + MER110-int LTR ERV1 4 676 -3971 845 248 35 0 chr18 23530746 23530948 -63146600 + MER58A DNA MER1_type 1 209 -15 8490 158 31 49 chr18 23530967 23532586 -63144962 + MER110-int LTR ERV1 719 2307 -2340 1851 248 61 45 chr18 23532593 23533170 -63144378 + MLT1E LTR MaLR 8 593 0 2365 204 2 5 chr18 23533170 23533586 -63143962 + MER110-int LTR ERV1 2303 2717 -1930 * 5304 192 41 30 chr18 23533585 23534694 -63142854 + MER110-int LTR ERV1 3492 4612 -35 245 210 81 0 chr18 23534743 23534805 -63142743 + MER110A LTR ERV1 3 69 -399 1121 115 6 12 chr18 23534812 23534977 -63142571 - Tigger7 DNA MER2_type -1 2586 2423 1003 231 4 26 chr18 23534996 23535225 -63142323 + MER110-int LTR ERV1 2084 2307 -2340 239 203 0 34 chr18 23535236 23535295 -63142253 + MLT1E LTR MaLR 13 69 -524 454 184 76 8 chr18 23535309 23535436 -63142112 + MER110A LTR ERV1 364 491 0 447 244 35 0 chr18 23537192 23537307 -63140241 + MIR SINE MIR 118 236 -26 186 221 0 117 chr18 23538716 23538793 -63138755 - MIR SINE MIR -80 182 115 937 130 0 92 chr18 23538888 23539072 -63138476 + AluJb SINE Alu 133 299 -13 22 0 0 0 chr18 23539441 23539463 -63138085 + AT_rich Low_complexity Low_complexity 1 22 0 2158 129 0 13 chr18 23539717 23540026 -63137522 - AluSq SINE Alu -6 307 3 468 264 62 79 chr18 23540220 23540447 -63137101 + L2 LINE L2 1424 1646 -1668 183 156 0 0 chr18 23543346 23543378 -63134170 + (TGAA)n Simple_repeat Simple_repeat 4 35 0 291 283 204 7 chr18 23544397 23544549 -63132999 + MIR SINE MIR 65 246 -16 347 235 94 17 chr18 23544727 23544862 -63132686 - MIR SINE MIR -51 157 11 200 320 39 47 chr18 23545479 23545607 -63131941 - MIR SINE MIR -62 146 20 339 326 51 7 chr18 23545682 23545820 -63131728 - L2 LINE L2 -1 3271 3128 1089 81 0 27 chr18 23546501 23546649 -63130899 - L1PB1 LINE L1 0 6151 6008 878 226 0 5 chr18 23546649 23546857 -63130691 + L1P LINE L1 4974 5180 -966 1329 261 66 16 chr18 23546901 23547342 -63130206 + LTR16B LTR ERVL 1 463 -1 802 187 45 7 chr18 23547691 23547846 -63129702 + L1PB4 LINE L1 5992 6152 -4 328 312 32 9 chr18 23548750 23548874 -63128674 - MIR SINE MIR -62 146 16 2476 180 65 11 chr18 23548930 23549408 -63128140 - MLT1D LTR MaLR -1 504 1 1430 139 62 83 chr18 23549641 23549965 -63127583 - L1MA5A LINE L1 0 6297 5981 213 147 31 39 chr18 23550316 23550445 -63127103 + (TTA)n Simple_repeat Simple_repeat 2 129 0 283 232 162 10 chr18 23552416 23552515 -63125033 - L2 LINE L2 0 3313 3200 509 195 32 41 chr18 23552652 23552775 -63124773 + MER103 DNA DNA 2 123 -43 203 311 40 14 chr18 23552952 23553026 -63124522 - MIR3 SINE MIR -130 78 3 2472 158 27 5 chr18 23554053 23554501 -63123047 - Tigger4(Zombi) DNA MER2_type -10 2721 2264 869 176 72 0 chr18 23554499 23554652 -63122896 - Tigger4(Zombi) DNA MER2_type -2563 168 5 * 482 229 25 34 chr18 23555034 23555152 -63122396 - L2 LINE L2 0 3313 3197 4371 91 5 2 chr18 23555260 23555832 -63121716 + L1PA13 LINE L1 5590 6163 0 2244 128 0 6 chr18 23556356 23556669 -63120879 + AluSx SINE Alu 1 311 -1 2528 49 0 13 chr18 23557262 23557566 -63119982 - AluY SINE Alu -11 300 1 821 204 34 23 chr18 23557667 23557843 -63119705 + MER58A DNA MER1_type 26 203 -21 358 274 0 60 chr18 23557916 23558033 -63119515 + MIR SINE MIR 92 201 -61 2107 108 44 0 chr18 23558167 23558462 -63119086 - AluSq SINE Alu -5 308 1 302 91 23 0 chr18 23559669 23559713 -63117835 + L1PA10 LINE L1 5888 5932 -236 24 0 0 0 chr18 23560120 23560144 -63117404 + AT_rich Low_complexity Low_complexity 1 24 0 443 306 96 44 chr18 23561144 23561391 -63116157 + MIR SINE MIR 3 258 -4 2057 128 0 33 chr18 23561895 23562200 -63115348 + AluSx SINE Alu 1 295 -17 2833 3 9 13 chr18 23563665 23563983 -63113565 - AluYb8 SINE Alu -1 317 1 287 311 114 0 chr18 23564161 23564293 -63113255 - MER63C DNA MER1_type -544 386 240 237 185 77 15 chr18 23564262 23564327 -63113221 + MER63C DNA MER1_type 335 403 -527 * 914 317 139 26 chr18 23564706 23565460 -63112088 + L2 LINE L2 1521 2359 -955 821 283 80 31 chr18 23565519 23566043 -63111505 + L2 LINE L2 2719 3313 0 340 286 10 31 chr18 23566259 23566357 -63111191 + L2 LINE L2 3177 3272 0 2115 123 3 3 chr18 23566804 23567104 -63110444 - AluSg SINE Alu -10 300 1 345 316 50 22 chr18 23567281 23567420 -63110128 - MIR SINE MIR -118 144 2 668 261 33 14 chr18 23568187 23568398 -63109150 - MIR SINE MIR -3 259 45 294 196 0 0 chr18 23568784 23568830 -63108718 - MIR3 SINE MIR -21 187 142 * 923 190 63 11 chr18 23568824 23568998 -63108550 + MER5A DNA MER1_type 7 189 0 202 156 0 0 chr18 23569009 23569041 -63108507 + MER5B DNA MER1_type 4 35 -143 18032 35 0 1 chr18 23569043 23571881 -63105667 + L1PA3 LINE L1 3310 6154 -1 34 0 0 0 chr18 23571881 23571915 -63105633 + AT_rich Low_complexity Low_complexity 1 34 0 325 299 165 0 chr18 23571965 23572092 -63105456 - MER5B DNA MER1_type -30 148 1 522 270 145 6 chr18 23572108 23572267 -63105281 + MER5A DNA MER1_type 9 189 0 226 301 32 32 chr18 23572270 23572363 -63105185 - MIR SINE MIR -112 150 58 939 107 107 0 chr18 23573845 23573994 -63103554 + L1PA16 LINE L1 6000 6164 -2 21463 90 6 10 chr18 23574051 23575175 -63102373 + Charlie3 DNA MER1_type 1 1128 -1578 2249 113 0 3 chr18 23575175 23575476 -63102072 - AluSx SINE Alu -12 300 1 21463 90 6 10 chr18 23575476 23577067 -63100481 + Charlie3 DNA MER1_type 1128 2706 0 1898 35 0 13 chr18 23577082 23577309 -63100239 + L1PA2 LINE L1 5932 6155 0 296 250 92 0 chr18 23577428 23577504 -63100044 - MER81 DNA DNA -16 98 16 259 244 219 25 chr18 23578702 23578821 -63098727 + MLT1J LTR MaLR 1 142 -369 961 150 28 28 chr18 23578929 23579109 -63098439 + MER53 DNA DNA 2 181 -8 457 292 64 64 chr18 23579127 23579377 -63098171 + MLT1J LTR MaLR 260 509 -2 21 36 0 0 chr18 23579802 23579830 -63097718 + AT_rich Low_complexity Low_complexity 1 28 0 565 342 12 25 chr18 23579834 23580077 -63097471 - MIR SINE MIR -7 255 16 180 200 0 0 chr18 23580242 23580282 -63097266 + (CA)n Simple_repeat Simple_repeat 1 40 0 189 306 157 28 chr18 23581400 23581508 -63096040 + MIR SINE MIR 30 151 -57 1581 245 116 130 chr18 23581574 23583111 -63094437 - L2 LINE L2 -102 3211 1687 566 229 99 20 chr18 23583149 23583441 -63094107 + L1MC5 LINE L1 7600 7914 -47 2335 207 90 5 chr18 23583496 23584065 -63093483 + L1MDa LINE L1 639 1255 -5285 304 206 8 114 chr18 23584880 23585011 -63092537 - L1MC/D LINE L1 -1996 5812 5696 4545 142 28 1 chr18 23585128 23585912 -63091636 + L1MA8 LINE L1 5485 6289 -2 2121 242 12 37 chr18 23586004 23586520 -63091028 + L1PA13 LINE L1 211 713 -6074 420 89 0 0 chr18 23586517 23586573 -63090975 + L1P LINE L1 4899 4954 -1192 * 1949 198 33 50 chr18 23586568 23587053 -63090495 + L1MCa LINE L1 219 695 -5731 2273 85 3 10 chr18 23587505 23587810 -63089738 - AluSx SINE Alu -9 303 1 1716 137 61 4 chr18 23588072 23588350 -63089198 + AluSx SINE Alu 1 294 -18 299 182 0 0 chr18 23588732 23588776 -63088772 - AluJ/FRAM SINE Alu -36 266 223 24 53 0 0 chr18 23588929 23588967 -63088581 + AT_rich Low_complexity Low_complexity 1 38 0 2132 139 123 5 chr18 23589001 23589383 -63088165 + MSTA LTR MaLR 2 428 0 275 177 5 101 chr18 23589471 23589669 -63087879 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 * 289 187 33 0 chr18 23589643 23589734 -63087814 + (TA)n Simple_repeat Simple_repeat 1 94 0 286 190 25 0 chr18 23589850 23589929 -63087619 + L1M4 LINE L1 2851 2931 -3215 230 219 16 0 chr18 23590035 23590099 -63087449 - L1MD3 LINE L1 -10 7985 7921 2916 210 70 58 chr18 23590117 23590733 -63086815 - L1MD1 LINE L1 -11 6231 5599 1568 123 17 4 chr18 23590733 23590969 -63086579 - AluSg/x SINE Alu 0 310 72 2916 210 70 58 chr18 23590969 23591222 -63086326 - L1MD1 LINE L1 -643 5599 5351 433 188 24 12 chr18 23591223 23591308 -63086240 - MLT1G1 LTR MaLR -504 91 6 398 291 125 6 chr18 23591761 23592145 -63085403 + Charlie7 DNA MER1_type 193 643 -1969 231 88 0 0 chr18 23592186 23592220 -63085328 + (TAAA)n Simple_repeat Simple_repeat 3 36 0 1242 143 73 77 chr18 23592866 23593166 -63084382 - L1MA8 LINE L1 -5 6286 5988 629 296 104 17 chr18 23593303 23593533 -63084015 - MIR SINE MIR -11 251 2 28 79 0 0 chr18 23594316 23594379 -63083169 + AT_rich Low_complexity Low_complexity 1 63 0 1630 188 13 7 chr18 23594436 23594734 -63082814 + AluJb SINE Alu 13 312 0 1495 133 13 144 chr18 23595786 23595894 -63081654 + MLT1B LTR MaLR 4 124 -266 401 190 20 10 chr18 23595894 23595994 -63081554 - U13 snRNA snRNA -2 102 2 1495 133 13 144 chr18 23595994 23596260 -63081288 + MLT1B LTR MaLR 124 329 -61 250 236 137 47 chr18 23597538 23597661 -63079887 + MIR SINE MIR 2 113 -149 2067 124 65 37 chr18 23597661 23598015 -63079533 - THE1B LTR MaLR 0 364 1 250 236 137 47 chr18 23598015 23598033 -63079515 + MIR SINE MIR 113 128 -134 2000 144 18 0 chr18 23598033 23598318 -63079230 + AluSx SINE Alu 1 290 -22 250 236 137 47 chr18 23598318 23598360 -63079188 + MIR SINE MIR 128 262 0 2161 102 0 30 chr18 23598461 23598765 -63078783 + AluSg SINE Alu 1 295 -15 601 181 9 17 chr18 23599160 23599276 -63078272 - AluJo SINE Alu -177 135 21 200 203 14 29 chr18 23599375 23599444 -63078104 + T-rich Low_complexity Low_complexity 6 73 0 21 36 0 0 chr18 23599746 23599774 -63077774 + AT_rich Low_complexity Low_complexity 1 28 0 2111 125 3 0 chr18 23600189 23600486 -63077062 - AluSq SINE Alu -15 298 1 1062 162 11 0 chr18 23600538 23600717 -63076831 - AluJb SINE Alu -11 301 121 2576 204 91 94 chr18 23600717 23601226 -63076322 - L1M4 LINE L1 -885 5261 4752 759 179 238 0 chr18 23601226 23601394 -63076154 - MER63A DNA MER1_type -1 209 2 2576 204 91 94 chr18 23601394 23601548 -63076000 - L1M4 LINE L1 -1394 4752 4599 720 229 0 0 chr18 23601548 23601688 -63075860 - AluJb SINE Alu -39 273 134 2576 204 91 94 chr18 23601688 23603610 -63073938 - L1M4 LINE L1 -1547 4599 2418 318 124 34 0 chr18 23603711 23603800 -63073748 + (TA)n Simple_repeat Simple_repeat 2 93 0 207 195 49 0 chr18 23603804 23603886 -63073662 + (TAA)n Simple_repeat Simple_repeat 3 88 0 6788 174 31 17 chr18 23605147 23606671 -63070877 + L1M3f LINE L1 15 1559 -4065 234 0 0 0 chr18 23606671 23606697 -63070851 + (T)n Simple_repeat Simple_repeat 1 26 0 3283 31 0 1 chr18 23606703 23606738 -63070810 + L1P1 LINE L1 5049 5083 -1072 4496 25 2 0 chr18 23606738 23607262 -63070286 - L1PA3 LINE L1 0 6155 5631 3283 31 0 1 chr18 23607262 23607808 -63069740 + L1PA3 LINE L1 5083 5627 -528 * 10877 185 46 25 chr18 23607806 23609954 -63067594 + L1M3f LINE L1 1547 3648 -2680 1493 214 7 14 chr18 23609954 23610249 -63067299 + AluJo SINE Alu 6 298 -14 10877 185 46 25 chr18 23610249 23610387 -63067161 + L1M3f LINE L1 3648 3782 -2546 198 0 0 0 chr18 23610387 23610409 -63067139 + (CAA)n Simple_repeat Simple_repeat 3 24 0 10877 185 46 25 chr18 23610409 23611301 -63066247 + L1M3f LINE L1 3782 4796 -1532 10824 93 14 13 chr18 23611315 23612837 -63064711 + L1P3 LINE L1 3 1525 -4936 235 111 0 22 chr18 23612837 23612882 -63064666 - L1M4 LINE L1 -2233 3913 3870 2611 137 12 2 chr18 23612890 23613322 -63064226 + L1MC/D LINE L1 5254 5689 -644 454 267 83 0 chr18 23614183 23614303 -63063245 + HERVL40 LTR ERVL 2612 2741 -2789 4930 213 19 37 chr18 23614307 23615401 -63062147 + L1M2 LINE L1 3 1065 -5784 1410 118 12 16 chr18 23615401 23615647 -63061901 + L1MA4A LINE L1 6056 6300 -3 4930 213 19 37 chr18 23615647 23615670 -63061878 + L1M2 LINE L1 1065 1087 -5762 5892 287 55 19 chr18 23615670 23617512 -63060036 + HERVL40 LTR ERVL 2756 4664 -866 12800 151 36 100 chr18 23618432 23618697 -63058851 + L1MA8 LINE L1 2169 2449 -3842 186 103 0 0 chr18 23618697 23618726 -63058822 + (TA)n Simple_repeat Simple_repeat 1 29 0 12800 151 36 100 chr18 23618726 23619787 -63057761 + L1MA8 LINE L1 2449 3576 -2715 594 140 11 0 chr18 23619787 23619880 -63057668 + FLAM_C SINE Alu 12 105 -38 12800 151 36 100 chr18 23619880 23619942 -63057606 + L1MA8 LINE L1 3576 3640 -2651 942 214 0 0 chr18 23619942 23620101 -63057447 + FRAM SINE Alu 1 152 -24 12800 151 36 100 chr18 23620101 23620827 -63056721 + L1MA8 LINE L1 3640 4411 -1880 2054 131 7 7 chr18 23620827 23621124 -63056424 + AluSx SINE Alu 1 297 -15 12800 151 36 100 chr18 23621124 23622777 -63054771 + L1MA8 LINE L1 4411 5919 -372 21374 91 10 3 chr18 23623678 23627545 -63050003 + L1PA7 LINE L1 2271 6154 0 3302 65 2 5 chr18 23627548 23627979 -63049569 + L1PA8 LINE L1 5740 6169 -3 376 338 47 28 chr18 23628027 23628240 -63049308 - L3 LINE CR1 -4 1573 1357 361 227 27 0 chr18 23628321 23628396 -63049152 - MER81 DNA DNA 0 114 38 720 295 41 20 chr18 23628404 23628648 -63048900 + MIR SINE MIR 6 254 -8 1680 296 65 56 chr18 23628679 23629428 -63048120 - L3 LINE CR1 -207 1370 615 292 351 52 0 chr18 23629466 23629600 -63047948 - MIR SINE MIR 0 262 122 4300 109 13 5 chr18 23629600 23630235 -63047313 + L1PA13 LINE L1 5524 6163 0 327 359 38 8 chr18 23630256 23630387 -63047161 - MIR SINE MIR -126 136 2 550 287 53 16 chr18 23630787 23630975 -63046573 - L2 LINE L2 -2 3311 3117 265 200 18 0 chr18 23631261 23631316 -63046232 + MSTB1 LTR MaLR 1 56 -376 6195 154 25 5 chr18 23631316 23632455 -63045093 + L1 LINE L1 3326 4487 -1659 778 159 0 16 chr18 23632790 23632916 -63044632 + FLAM_C SINE Alu 1 124 -9 903 38 0 0 chr18 23632924 23633058 -63044490 + AluY SINE Alu 181 314 0 2145 134 3 0 chr18 23633408 23633707 -63043841 - AluSx SINE Alu -12 300 1 28 29 0 0 chr18 23633939 23633974 -63043574 + AT_rich Low_complexity Low_complexity 1 35 0 1630 115 0 0 chr18 23633974 23634226 -63043322 + L1 LINE L1 4477 4728 -1418 2300 155 67 25 chr18 23635333 23635739 -63041809 - LTR36 LTR ERV1 0 611 189 1680 152 3 30 chr18 23635709 23636006 -63041542 - LTR36 LTR ERV1 -322 289 1 * 358 216 72 18 chr18 23636625 23636736 -63040812 - MIR SINE MIR -57 205 89 298 246 25 107 chr18 23636739 23636861 -63040687 - MIR SINE MIR -131 131 20 441 0 0 0 chr18 23636889 23636938 -63040610 + (CA)n Simple_repeat Simple_repeat 2 50 0 1317 275 132 0 chr18 23637076 23637509 -63040039 + L2 LINE L2 1961 2450 -864 2653 199 53 40 chr18 23637509 23638720 -63038828 - L1M4c LINE L1 -3888 2496 1178 892 221 76 38 chr18 23638692 23639059 -63038489 - L1MEc LINE L1 -4175 2388 2008 * 861 126 0 35 chr18 23639070 23639213 -63038335 + FLAM_C SINE Alu 5 142 -1 1107 282 26 22 chr18 23639214 23639714 -63037834 - L1MEc LINE L1 -4574 1822 1321 393 290 112 25 chr18 23639832 23640108 -63037440 - L1MC/D LINE L1 -1987 6215 5916 517 300 142 40 chr18 23640267 23640520 -63037028 + L3 LINE CR1 1287 1565 -12 436 281 26 0 chr18 23640715 23640829 -63036719 - L2 LINE L2 0 3313 3197 328 231 77 11 chr18 23642089 23642180 -63035368 + MIR3 SINE MIR 106 202 -6 189 286 0 0 chr18 23642276 23642325 -63035223 - L2 LINE L2 -4 3309 3261 369 284 127 0 chr18 23642704 23642838 -63034710 - L2 LINE L2 -2 3311 3161 233 313 86 43 chr18 23643130 23643293 -63034255 - L2 LINE L2 -493 2821 2652 2424 60 10 7 chr18 23643320 23643622 -63033926 - AluY SINE Alu -8 303 1 2069 199 26 46 chr18 23644675 23644858 -63032690 - L1MC/D LINE L1 -940 5600 5415 2359 85 10 3 chr18 23644858 23645165 -63032383 - AluY SINE Alu -2 309 1 2069 199 26 46 chr18 23645165 23645563 -63031985 - L1MC/D LINE L1 -1125 5415 5031 2947 255 100 19 chr18 23645568 23646112 -63031436 - L1MDa LINE L1 -3611 2929 2431 339 25 0 0 chr18 23646112 23646152 -63031396 + (TG)n Simple_repeat Simple_repeat 1 40 0 2947 255 100 19 chr18 23646152 23647308 -63030240 - L1MDa LINE L1 -4109 2431 1086 2213 91 40 7 chr18 23647586 23647883 -63029665 - AluSx SINE Alu 0 312 6 205 238 25 0 chr18 23648121 23648201 -63029347 + GA-rich Low_complexity Low_complexity 5 86 0 2514 66 0 0 chr18 23648677 23648980 -63028568 + AluY SINE Alu 1 303 -8 22 35 0 0 chr18 23648992 23649021 -63028527 + AT_rich Low_complexity Low_complexity 1 29 0 209 217 121 60 chr18 23650606 23650689 -63026859 + L2 LINE L2 3226 3313 0 531 213 106 31 chr18 23651479 23651639 -63025909 - MIR SINE MIR -1 261 90 207 310 40 40 chr18 23651702 23651802 -63025746 + L2 LINE L2 3163 3262 -10 529 146 0 0 chr18 23651810 23651892 -63025656 + AluJ/FLAM SINE Alu 7 88 -224 23 54 0 0 chr18 23652890 23652927 -63024621 + AT_rich Low_complexity Low_complexity 1 37 0 518 249 89 18 chr18 23652934 23653103 -63024445 + L1MC5 LINE L1 7706 7886 -75 5975 152 24 31 chr18 23653364 23653604 -63023944 + L1MA4A LINE L1 4090 4330 -1973 2239 92 3 0 chr18 23653604 23653887 -63023661 + AluSx SINE Alu 1 284 -28 315 0 0 0 chr18 23653887 23653922 -63023626 + (CA)n Simple_repeat Simple_repeat 2 36 0 5975 152 24 31 chr18 23653922 23655852 -63021696 + L1MA4A LINE L1 4328 6302 -1 5970 179 53 21 chr18 23656331 23658580 -63018968 - L1MC1 LINE L1 -8 6325 4007 909 188 20 5 chr18 23658680 23658877 -63018671 - L1MC1 LINE L1 -2097 4049 3850 3975 184 11 15 chr18 23658881 23659597 -63017951 - MER44D DNA MER2_type 0 605 21 435 247 0 0 chr18 23659628 23659725 -63017823 - L1MC1 LINE L1 -2296 3850 3754 639 248 113 55 chr18 23659770 23660008 -63017540 + MLT1E LTR MaLR 1 252 -341 344 172 0 0 chr18 23660015 23660079 -63017469 + L1 LINE L1 4265 4328 -1818 1344 56 6 0 chr18 23660079 23660240 -63017308 + AluSx SINE Alu 1 162 -150 1609 232 21 3 chr18 23660256 23660583 -63016965 + MLT1E LTR MaLR 259 591 -2 3526 224 122 29 chr18 23660887 23662286 -63015262 - L1MC1 LINE L1 -2346 3800 2271 1416 196 4 22 chr18 23662290 23662560 -63014988 - AluJo SINE Alu -1 311 47 5668 78 50 1 chr18 23663330 23664126 -63013422 + L1PA10 LINE L1 5324 6158 -10 2292 86 0 3 chr18 23664140 23664430 -63013118 + AluSg SINE Alu 1 289 -21 510 230 103 8 chr18 23664958 23665084 -63012464 - MER45A DNA AcHobo -1 177 40 340 239 130 0 chr18 23665573 23665665 -63011883 - MIR SINE MIR -3 259 156 465 256 17 8 chr18 23665744 23665861 -63011687 - LTR33 LTR ERVL -35 486 369 788 266 82 47 chr18 23665907 23666078 -63011470 - LTR33 LTR ERVL -256 265 81 955 203 33 0 chr18 23666078 23666260 -63011288 - MER5A DNA MER1_type -1 188 1 788 266 82 47 chr18 23666260 23666344 -63011204 - LTR33 LTR ERVL -440 81 1 1990 108 150 24 chr18 23666845 23667225 -63010323 - MSTA LTR MaLR 0 428 1 2072 131 0 0 chr18 23667716 23668013 -63009535 - AluSx SINE Alu -3 309 13 1975 154 0 3 chr18 23668299 23668592 -63008956 + AluSx SINE Alu 1 292 -20 21 0 0 0 chr18 23669044 23669065 -63008483 + AT_rich Low_complexity Low_complexity 1 21 0 1772 140 61 17 chr18 23669288 23669581 -63007967 - AluJb SINE Alu -6 306 1 326 251 109 34 chr18 23669584 23669637 -63007911 - L1MC4a LINE L1 -1914 5894 5846 3325 141 60 22 chr18 23669637 23670106 -63007442 + MER6A DNA MER2_type 1 498 -367 2612 53 0 0 chr18 23670106 23670410 -63007138 + AluY SINE Alu 1 304 -7 3325 141 60 22 chr18 23670410 23670523 -63007025 + MER6A DNA MER2_type 498 605 0 326 251 109 34 chr18 23670523 23670644 -63006904 - L1MC4a LINE L1 -1962 5846 5707 530 314 0 12 chr18 23670654 23670823 -63006725 - HERV16 LTR ERVL -3575 1421 1255 426 281 0 72 chr18 23670856 23670995 -63006553 + HERV16 LTR ERVL 987 1115 -3881 794 241 46 0 chr18 23671375 23671591 -63005957 + L1MC5 LINE L1 5723 5948 -1860 1453 230 64 108 chr18 23671738 23672488 -63005060 + L1MC5 LINE L1 6874 7542 -419 2042 181 73 35 chr18 23672488 23672969 -63004579 - MLT1D LTR MaLR -4 501 3 1453 230 64 108 chr18 23672969 23673320 -63004228 + L1MC5 LINE L1 7542 7907 -54 2926 199 25 12 chr18 23673504 23674152 -63003396 + L1MC3 LINE L1 6397 7052 -733 666 283 110 35 chr18 23674989 23675307 -63002241 + L2 LINE L2 2967 3308 -5 1693 217 52 19 chr18 23675311 23675535 -63002013 + L1ME1 LINE L1 5724 5939 -227 1573 155 11 26 chr18 23675535 23675799 -63001749 + AluJo SINE Alu 43 302 -10 1693 217 52 19 chr18 23675799 23675998 -63001550 + L1ME1 LINE L1 5939 6161 -5 257 248 109 50 chr18 23678601 23678739 -62998809 + MIR SINE MIR 37 186 -67 21315 71 5 0 chr18 23679362 23682135 -62995413 + L1P LINE L1 11 2798 -3348 24 0 0 0 chr18 23882174 23882198 -62795350 + AT_rich Low_complexity Low_complexity 1 24 0 379 310 86 17 chr18 23882234 23882466 -62795082 - L2 LINE L2 -638 2676 2429 1012 87 0 0 chr18 23883504 23883631 -62793917 - AluSp SINE Alu -181 132 6 1928 157 36 0 chr18 23883731 23884063 -62793485 + MER2 DNA MER2_type 1 344 0 296 273 13 0 chr18 23884302 23884379 -62793169 + L1ME LINE L1 5522 5599 -522 389 252 52 7 chr18 23884560 23884695 -62792853 - L1MEc LINE L1 -6219 177 37 212 269 0 0 chr18 23884696 23884748 -62792800 + L2 LINE L2 2192 2243 -1071 781 177 8 0 chr18 23885033 23885163 -62792385 + AluJb SINE Alu 1 131 -181 2039 75 7 34 chr18 23885280 23885599 -62791949 - AluY SINE Alu 0 311 1 830 140 73 7 chr18 23885601 23885751 -62791797 - AluJb SINE Alu -16 296 137 2067 124 7 10 chr18 23886103 23886394 -62791154 + AluSx SINE Alu 1 290 -22 585 185 97 26 chr18 23886566 23886793 -62790755 - AluSc SINE Alu -66 243 1 2296 99 3 0 chr18 23886895 23887198 -62790350 + AluSq SINE Alu 1 304 -9 237 65 0 0 chr18 23887199 23887230 -62790318 + (CA)n Simple_repeat Simple_repeat 2 32 0 1975 175 0 0 chr18 23887414 23887723 -62789825 + AluJb SINE Alu 1 309 -3 2343 88 0 0 chr18 23888015 23888311 -62789237 - AluY SINE Alu -15 296 1 2315 85 10 0 chr18 23888503 23888798 -62788750 + AluSx SINE Alu 1 298 -14 1101 135 6 34 chr18 23888923 23889101 -62788447 + AluSp SINE Alu 132 304 -9 2235 124 7 0 chr18 23889104 23889411 -62788137 + AluSx SINE Alu 1 309 -3 2367 58 7 10 chr18 23889483 23889777 -62787771 - AluY SINE Alu -17 294 2 2231 120 0 0 chr18 23889778 23890077 -62787471 - AluSq SINE Alu -14 299 1 2376 166 18 66 chr18 23890524 23890595 -62786953 + L1 LINE L1 4559 4632 -1514 2100 121 7 0 chr18 23890595 23890885 -62786663 - AluSx SINE Alu -18 294 3 2376 166 18 66 chr18 23890885 23890989 -62786559 + L1 LINE L1 4632 4739 -1407 1602 153 31 4 chr18 23890989 23891244 -62786304 + AluSx SINE Alu 51 312 0 2376 166 18 66 chr18 23891244 23891688 -62785860 + L1 LINE L1 4739 5149 -997 1739 170 0 52 chr18 23891952 23892281 -62785267 + AluJo SINE Alu 1 312 0 1536 178 46 20 chr18 23893432 23893735 -62783813 - AluJo SINE Alu -1 311 1 333 340 13 47 chr18 23893737 23893887 -62783661 - HAL1 LINE L1 -586 1921 1777 387 253 0 11 chr18 23893891 23893978 -62783570 - L2 LINE L2 -7 3306 3221 908 264 150 17 chr18 23893984 23894616 -62782932 - HAL1 LINE L1 -764 1743 1020 246 32 0 0 chr18 23894616 23894647 -62782901 + (TG)n Simple_repeat Simple_repeat 2 32 0 908 264 150 17 chr18 23894647 23894669 -62782879 - HAL1 LINE L1 -1487 1020 1002 2372 81 0 31 chr18 23894765 23895086 -62782462 - AluY SINE Alu 0 311 1 295 149 15 0 chr18 23895098 23895165 -62782383 - L1MB8 LINE L1 0 6184 6115 1639 159 32 0 chr18 23895171 23895454 -62782094 + AluJb SINE Alu 6 297 -15 527 229 206 0 chr18 23895499 23895630 -62781918 - FRAM SINE Alu -8 158 1 316 141 39 0 chr18 23895631 23895709 -62781839 - MER20B DNA MER1_type -38 745 665 356 289 123 11 chr18 23895751 23895938 -62781610 - MER20B DNA MER1_type -196 587 380 1353 75 139 5 chr18 23896452 23896653 -62780895 - MER30 DNA MER1_type 0 230 3 229 313 16 0 chr18 23896697 23896761 -62780787 - MER5A DNA MER1_type -56 133 69 240 314 65 65 chr18 23896826 23896950 -62780598 - L3 LINE CR1 -35 1542 1419 361 271 107 8 chr18 23897059 23897181 -62780367 + MIR SINE MIR 111 244 -18 280 285 289 26 chr18 23897271 23897541 -62780007 + L2 LINE L2 2636 2976 -338 370 282 77 35 chr18 23897640 23897735 -62779813 + L2 LINE L2 3136 3243 -70 1581 154 7 35 chr18 23897735 23898020 -62779528 + AluJo SINE Alu 31 307 -5 370 282 77 35 chr18 23898020 23898094 -62779454 + L2 LINE L2 3243 3312 -1 259 351 120 40 chr18 23898732 23899008 -62778540 + L2 LINE L2 1117 1414 -1900 332 227 76 59 chr18 23899099 23899218 -62778330 + FLAM_C SINE Alu 1 121 -12 561 124 0 0 chr18 23899218 23899315 -62778233 + (CA)n Simple_repeat Simple_repeat 1 97 0 546 281 83 70 chr18 23899325 23899723 -62777825 + L2 LINE L2 2543 2945 -369 2177 121 0 0 chr18 23899816 23900113 -62777435 + AluSx SINE Alu 6 302 -10 1999 135 28 0 chr18 23900565 23900854 -62776694 - AluSx SINE Alu -15 297 1 743 79 0 20 chr18 23900866 23900967 -62776581 - AluSg/x SINE Alu -12 300 202 1353 139 60 4 chr18 23901010 23901291 -62776257 - MER33 DNA MER1_type -27 297 1 23 33 0 0 chr18 23901862 23901892 -62775656 + AT_rich Low_complexity Low_complexity 1 30 0 249 203 133 94 chr18 23902284 23902412 -62775136 - L3 LINE CR1 -231 1346 1214 * 639 348 9 39 chr18 23902379 23902712 -62774836 + L2 LINE L2 2818 3140 -173 1767 114 0 137 chr18 23902719 23903069 -62774479 - AluSx SINE Alu 0 302 1 708 306 141 0 chr18 23903410 23903906 -62773642 - HAL1 LINE L1 -278 2229 1664 324 238 50 0 chr18 23903917 23904018 -62773530 - L1MC5 LINE L1 -45 7916 7811 409 221 196 6 chr18 23904105 23904263 -62773285 - HAL1 LINE L1 -832 1675 1488 437 141 39 0 chr18 23904310 23904388 -62773160 - FLAM SINE Alu -14 129 49 624 271 122 71 chr18 23904389 23904798 -62772750 - HAL1 LINE L1 -1013 1494 1065 261 0 0 0 chr18 23904799 23904828 -62772720 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 458 237 23 69 chr18 23904830 23904961 -62772587 - FLAM_C SINE Alu -16 127 3 2284 256 83 59 chr18 23904965 23905070 -62772478 - HAL1 LINE L1 -1427 1080 979 1148 174 10 0 chr18 23905070 23905277 -62772271 + MER6B DNA MER2_type 2 210 0 2284 256 83 59 chr18 23905277 23905993 -62771555 - HAL1 LINE L1 -1528 979 226 829 174 100 5 chr18 23905993 23906183 -62771365 + MER3 DNA MER1_type 1 208 -1 2284 256 83 59 chr18 23906183 23906405 -62771143 - HAL1 LINE L1 -2281 226 11 990 104 0 15 chr18 23906625 23906760 -62770788 + FLAM_C SINE Alu 1 133 0 1832 139 17 23 chr18 23906888 23907190 -62770358 - AluSx SINE Alu -9 303 4 2292 94 0 0 chr18 23907251 23907548 -62770000 + AluY SINE Alu 1 297 -14 292 236 122 8 chr18 23907612 23907735 -62769813 - L1ME4a LINE L1 -1 6120 5984 1992 146 7 10 chr18 23908001 23908296 -62769252 - AluSx SINE Alu -18 294 1 449 303 78 34 chr18 23908641 23909048 -62768500 + MLT1J LTR MaLR 153 493 -18 307 271 52 10 chr18 23909068 23909164 -62768384 + MIR SINE MIR 163 262 0 2420 89 3 0 chr18 23909843 23910147 -62767401 + AluSc SINE Alu 1 305 -4 217 256 77 51 chr18 23910966 23911044 -62766504 + MIR SINE MIR 63 142 -120 640 274 46 10 chr18 23911066 23911263 -62766285 - MIR SINE MIR -57 205 2 1872 138 0 24 chr18 23911742 23912038 -62765510 - AluJb SINE Alu -23 289 1 509 171 57 9 chr18 23912301 23912406 -62765142 - HY1 scRNA scRNA -1 111 2 258 229 0 0 chr18 23912545 23912606 -62764942 - L1MA10 LINE L1 0 6334 6274 2134 117 0 38 chr18 23912818 23913135 -62764413 + AluSx SINE Alu 1 305 -7 420 174 0 0 chr18 23913807 23913876 -62763672 + AluJ/FLAM SINE Alu 1 69 -243 705 255 61 18 chr18 23914051 23914329 -62763219 + AluJo SINE Alu 2 291 -11 249 92 15 31 chr18 23914566 23914631 -62762917 + (TTTTA)n Simple_repeat Simple_repeat 1 64 0 2315 114 0 3 chr18 23914637 23914945 -62762603 - AluSx SINE Alu -5 307 1 25 0 0 0 chr18 23914948 23914973 -62762575 + AT_rich Low_complexity Low_complexity 1 25 0 1992 122 3 21 chr18 23915838 23916126 -62761422 - AluSx SINE Alu -19 293 11 276 298 70 53 chr18 23916137 23916251 -62761297 - MIR3 SINE MIR -48 160 45 616 288 67 67 chr18 23916456 23916723 -62760825 - L2 LINE L2 -403 2911 2645 478 157 12 0 chr18 23916735 23916818 -62760730 + L1MC1 LINE L1 6241 6324 -9 418 168 88 64 chr18 23917222 23917347 -62760201 + L1MC/D LINE L1 5669 5796 -563 24 0 0 0 chr18 23918386 23918410 -62759138 + AT_rich Low_complexity Low_complexity 1 24 0 1547 156 85 22 chr18 23918410 23918680 -62758868 - AluJb SINE Alu -25 287 1 26 30 0 0 chr18 23919011 23919044 -62758504 + AT_rich Low_complexity Low_complexity 1 33 0 1973 151 7 0 chr18 23920378 23920683 -62756865 + AluSx SINE Alu 1 307 -5 1102 186 7 136 chr18 23920691 23920901 -62756647 + L1 LINE L1 4282 4517 -1629 1514 205 14 14 chr18 23920901 23921189 -62756359 + AluJo SINE Alu 1 288 -24 1102 186 7 136 chr18 23921189 23921228 -62756320 + L1 LINE L1 4517 4559 -1587 2543 60 0 0 chr18 23921228 23921529 -62756019 + AluY SINE Alu 1 301 -10 1102 186 7 136 chr18 23921529 23921697 -62755851 + L1 LINE L1 4559 4646 -1500 224 335 27 97 chr18 23921741 23921926 -62755622 + L2 LINE L2 2805 2976 -337 239 204 0 0 chr18 23922131 23922175 -62755373 + L2 LINE L2 3261 3304 -9 2269 67 3 63 chr18 23922305 23922621 -62754927 - AluSp SINE Alu -16 297 1 24 32 0 0 chr18 23922808 23922839 -62754709 + AT_rich Low_complexity Low_complexity 1 31 0 277 346 53 15 chr18 23923103 23923236 -62754312 - MIR SINE MIR -121 141 4 1573 217 52 19 chr18 23923509 23923708 -62753840 - L1ME1 LINE L1 -5 6161 5970 1602 155 11 26 chr18 23923708 23923972 -62753576 - AluJo SINE Alu -10 302 43 1573 217 52 19 chr18 23923972 23924196 -62753352 - L1ME1 LINE L1 -196 5970 5724 668 283 110 35 chr18 23924200 23924518 -62753030 - L2 LINE L2 -5 3308 2967 2729 199 25 12 chr18 23925355 23926003 -62751545 - L1MC3 LINE L1 -733 7052 6397 1197 230 62 108 chr18 23926187 23926538 -62751010 - L1MC5 LINE L1 -54 7907 7541 2041 179 73 35 chr18 23926538 23927019 -62750529 + MLT1D LTR MaLR 3 501 -4 1197 230 62 108 chr18 23927019 23927769 -62749779 - L1MC5 LINE L1 -420 7541 6890 737 241 46 0 chr18 23927916 23928132 -62749416 - L1MC5 LINE L1 -1860 5948 5723 386 281 0 72 chr18 23928512 23928651 -62748897 - HERV16 LTR ERVL -3881 1115 987 611 284 0 12 chr18 23928684 23928853 -62748695 + HERV16 LTR ERVL 1255 1421 -3575 294 243 110 35 chr18 23928865 23928984 -62748564 + L1MC4a LINE L1 5709 5846 -1962 3306 141 60 22 chr18 23928984 23929097 -62748451 - MER6A DNA MER2_type -260 605 498 2620 53 0 0 chr18 23929097 23929401 -62748147 - AluY SINE Alu -7 304 1 3306 141 60 22 chr18 23929401 23929870 -62747678 - MER6A DNA MER2_type -367 498 1 294 243 110 35 chr18 23929870 23929923 -62747625 + L1MC4a LINE L1 5846 5894 -1914 1803 140 61 17 chr18 23929926 23930219 -62747329 + AluJb SINE Alu 1 306 -6 2004 154 0 3 chr18 23930915 23931208 -62746340 - AluSx SINE Alu -20 292 1 2049 129 0 0 chr18 23931494 23931780 -62745768 + AluSx SINE Alu 13 298 -14 945 162 7 7 chr18 23932127 23932281 -62745267 - AluJo SINE Alu -12 290 137 416 143 14 0 chr18 23932281 23932351 -62745197 - AluJo SINE Alu -176 136 66 1441 97 63 37 chr18 23932352 23932546 -62745002 - Tigger1 DNA MER2_type -832 1586 1381 1539 78 5 34 chr18 23932546 23932770 -62744778 + AluSg/x SINE Alu 85 302 0 1441 97 63 37 chr18 23932770 23932841 -62744707 - Tigger1 DNA MER2_type -1037 1381 1313 855 223 77 21 chr18 23932841 23933074 -62744474 + LTR8 LTR ERV1 1 246 -445 956 237 40 117 chr18 23933079 23933624 -62743924 + LTR8 LTR ERV1 153 655 -36 7652 119 37 26 chr18 23933666 23934537 -62743011 - Tigger1 DNA MER2_type -1101 1317 457 1858 111 67 30 chr18 23934537 23934835 -62742713 - AluJb SINE Alu 0 312 4 7652 119 37 26 chr18 23934835 23935036 -62742512 - Tigger1 DNA MER2_type -1961 457 260 2322 73 3 10 chr18 23935036 23935336 -62742212 + AluY SINE Alu 1 298 -13 7652 119 37 26 chr18 23935336 23935564 -62741984 - Tigger1 DNA MER2_type -2158 260 2 1923 127 25 11 chr18 23936163 23936446 -62741102 - AluJo SINE Alu -15 297 11 709 245 132 63 chr18 23936464 23936716 -62740832 + L1MC5 LINE L1 5618 5851 -2110 2280 88 0 0 chr18 23936716 23937000 -62740548 + AluSc SINE Alu 1 284 -25 709 245 132 63 chr18 23937000 23937705 -62739843 + L1MC5 LINE L1 5851 6697 -1264 2670 49 0 0 chr18 23937705 23938010 -62739538 + AluY SINE Alu 1 305 -6 709 245 132 63 chr18 23938010 23938391 -62739157 + L1MC5 LINE L1 6697 7050 -911 2281 108 0 3 chr18 23938669 23938975 -62738573 + AluY SINE Alu 2 306 -5 2403 90 0 3 chr18 23939145 23939455 -62738093 - AluY SINE Alu -2 309 1 237 234 0 0 chr18 23939508 23939572 -62737976 + CT-rich Low_complexity Low_complexity 2 65 0 288 245 112 31 chr18 23939622 23939720 -62737828 - MIR SINE MIR -78 184 79 2785 123 10 69 chr18 23939723 23940056 -62737492 + LTR3b LTR ERVK 1 293 -207 2428 69 7 0 chr18 23940056 23940360 -62737188 - AluY SINE Alu -5 306 1 2785 123 10 69 chr18 23940360 23940546 -62737002 + LTR3b LTR ERVK 293 489 -11 580 100 0 0 chr18 23940548 23940628 -62736920 + LTR3b LTR ERVK 421 500 0 2585 126 28 87 chr18 23940700 23941040 -62736508 - LTR26B LTR ERV1 0 531 173 1748 137 93 29 chr18 23941040 23941318 -62736230 - AluSx SINE Alu -16 296 1 2585 126 28 87 chr18 23941318 23941523 -62736025 - LTR26B LTR ERV1 -358 173 -42 3883 121 8 47 chr18 23941523 23942046 -62735502 + MER41B LTR ERV1 1 543 -92 2115 108 3 59 chr18 23942046 23942369 -62735179 - AluSx SINE Alu -1 311 7 3883 121 8 47 chr18 23942369 23942383 -62735165 + MER41B LTR ERV1 543 556 -79 2147 125 0 0 chr18 23942383 23942678 -62734870 - AluSg SINE Alu -15 295 1 2294 107 0 0 chr18 23942681 23942981 -62734567 - AluSx SINE Alu -12 300 1 3883 121 8 47 chr18 23942981 23943099 -62734449 + MER41B LTR ERV1 558 635 0 2585 126 28 87 chr18 23943099 23943116 -62734432 - LTR26B LTR ERV1 -572 4294967255 1 1260 169 81 35 chr18 23943120 23943232 -62734316 - Charlie1 DNA MER1_type -7 2754 2649 1611 144 0 120 chr18 23943232 23943573 -62733975 + AluJo SINE Alu 1 300 -2 1260 169 81 35 chr18 23943573 23943832 -62733716 - Charlie1 DNA MER1_type -112 2649 2366 509 77 0 12 chr18 23943849 23944069 -62733479 + AluY SINE Alu 1 289 -21 618 213 134 0 chr18 23945300 23945427 -62732121 + MER5A DNA MER1_type 46 189 0 356 141 14 42 chr18 23945453 23945524 -62732024 - MER5B DNA MER1_type 0 178 110 316 109 44 35 chr18 23945536 23945719 -62731829 + AluJo SINE Alu 50 266 -36 251 208 151 0 chr18 23945731 23945784 -62731764 - MER5B DNA MER1_type -49 129 69 450 280 127 13 chr18 23946056 23946213 -62731335 + MIR3 SINE MIR 20 194 -14 2140 99 3 32 chr18 23946663 23946977 -62730571 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr18 23946984 23947005 -62730543 + AT_rich Low_complexity Low_complexity 1 21 0 1846 157 3 41 chr18 23947115 23947299 -62730249 - AluJb SINE Alu -6 306 137 2193 79 7 17 chr18 23947299 23947589 -62729959 - AluSp SINE Alu -26 287 1 1846 157 3 41 chr18 23947589 23947722 -62729826 - AluJb SINE Alu -175 137 1 245 230 203 14 chr18 23947977 23948051 -62729497 + L2 LINE L2 3184 3271 -1 25 31 0 0 chr18 23948228 23948260 -62729288 + AT_rich Low_complexity Low_complexity 1 32 0 2002 108 150 24 chr18 23948736 23949116 -62728432 + MSTA LTR MaLR 1 428 0 701 266 82 47 chr18 23949617 23949701 -62727847 + LTR33 LTR ERVL 1 81 -440 955 203 33 0 chr18 23949701 23949883 -62727665 + MER5A DNA MER1_type 1 188 -1 701 266 82 47 chr18 23949883 23950054 -62727494 + LTR33 LTR ERVL 81 265 -256 428 256 17 8 chr18 23950100 23950217 -62727331 + LTR33 LTR ERVL 369 486 -35 336 239 130 0 chr18 23950296 23950388 -62727160 + MIR SINE MIR 156 259 -3 467 230 103 8 chr18 23950877 23951003 -62726545 + MER45A DNA AcHobo 40 177 -1 29 0 0 0 chr18 23951511 23951540 -62726008 + AT_rich Low_complexity Low_complexity 1 29 0 2209 89 0 4 chr18 23951540 23951821 -62725727 - AluSg SINE Alu -30 280 1 5382 78 50 1 chr18 23951835 23952631 -62724917 - L1PA10 LINE L1 -10 6158 5324 1455 196 4 22 chr18 23953401 23953671 -62723877 + AluJo SINE Alu 47 311 -1 3245 228 124 28 chr18 23953675 23955113 -62722435 + L1M4 LINE L1 2271 3847 -2299 1506 238 18 3 chr18 23955378 23955706 -62721842 - MLT1E LTR MaLR -2 591 259 1346 56 6 0 chr18 23955722 23955883 -62721665 - AluSx SINE Alu -150 162 1 329 172 0 0 chr18 23955883 23955947 -62721601 - L1 LINE L1 -1818 4328 4265 569 245 112 56 chr18 23955959 23956192 -62721356 - MLT1E LTR MaLR -347 246 1 407 247 0 0 chr18 23956237 23956334 -62721214 + L1M4 LINE L1 3754 3850 -2296 3733 184 11 15 chr18 23956365 23957081 -62720467 + MER44D DNA MER2_type 21 605 0 2461 218 51 7 chr18 23957085 23957792 -62719756 + L1M4 LINE L1 3850 4587 -1559 2130 118 7 0 chr18 23957967 23958263 -62719285 + AluSx SINE Alu 1 298 -14 3591 133 31 76 chr18 23958270 23958493 -62719055 - L1MA5 LINE L1 -22 6278 6046 2251 108 0 3 chr18 23958493 23958798 -62718750 - AluY SINE Alu -7 304 1 1452 225 3 19 chr18 23958804 23959120 -62718428 - 7SLRNA srpRNA srpRNA -9 311 1 3591 133 31 76 chr18 23959120 23959595 -62717953 - L1MA5 LINE L1 -259 6041 5609 2036 72 8 4 chr18 23959595 23959858 -62717690 - AluY SINE Alu -3 308 45 3591 133 31 76 chr18 23959858 23959927 -62717621 - L1MA5 LINE L1 -691 5609 5538 340 311 25 42 chr18 23960106 23960225 -62717323 - L2 LINE L2 -37 3235 3119 186 358 15 0 chr18 23960439 23960506 -62717042 - L2 LINE L2 -1020 2294 2227 21 0 0 0 chr18 23961244 23961265 -62716283 + AT_rich Low_complexity Low_complexity 1 21 0 1570 154 65 29 chr18 23961265 23961544 -62716004 - AluJb SINE Alu -23 289 1 381 268 29 7 chr18 23961667 23961805 -62715743 + L1MD3 LINE L1 7837 7977 -18 750 136 0 0 chr18 23962238 23962356 -62715192 + L1PA14 LINE L1 6035 6152 -9 2110 125 7 0 chr18 23962921 23963216 -62714332 - AluSx SINE Alu -15 297 1 400 277 153 21 chr18 23963434 23963669 -62713879 + L2 LINE L2 3038 3303 -10 185 143 0 0 chr18 23963722 23963750 -62713798 - L2 LINE L2 -32 3240 3213 193 279 139 0 chr18 23963838 23963924 -62713624 + L2 LINE L2 3208 3305 -8 553 268 112 33 chr18 23964021 23964497 -62713051 + MLT1G1 LTR MaLR 15 529 -13 812 214 16 5 chr18 23965516 23965703 -62711845 - MER58A DNA MER1_type 0 224 36 26 50 0 0 chr18 23966056 23966096 -62711452 + AT_rich Low_complexity Low_complexity 1 40 0 1780 169 0 10 chr18 23966670 23966960 -62710588 - AluJo SINE Alu -25 287 1 3639 156 93 5 chr18 23967385 23968254 -62709294 + L1MB8 LINE L1 5219 6176 -2 339 185 141 30 chr18 23968332 23968467 -62709081 + L1MDa LINE L1 2279 2428 -4112 1796 154 0 11 chr18 23968648 23968957 -62708591 + AluJb SINE Alu 1 306 0 2070 53 21 25 chr18 23969095 23969377 -62708171 + AluY SINE Alu 1 281 -30 1985 114 71 0 chr18 23970921 23971202 -62706346 + AluSx SINE Alu 2 302 -10 394 288 41 55 chr18 23971326 23971472 -62706076 + MIR SINE MIR 1 144 -64 908 214 64 67 chr18 23971615 23971960 -62705588 - MER2 DNA MER2_type 0 344 1 1850 153 38 52 chr18 23972489 23972889 -62704659 + L1MB5 LINE L1 5773 6166 -8 398 260 281 7 chr18 23973067 23973213 -62704335 - MER5A DNA MER1_type 0 189 4 1475 197 21 45 chr18 23973447 23973736 -62703812 + AluJo SINE Alu 1 282 -30 198 0 0 0 chr18 23973739 23973761 -62703787 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 389 214 169 0 chr18 23974666 23974755 -62702793 - L2 LINE L2 -14 3299 3196 2293 101 0 3 chr18 23975621 23975928 -62701620 + AluSg SINE Alu 1 306 -4 371 229 102 96 chr18 23976682 23977048 -62700500 + L1M4 LINE L1 5152 5536 -648 929 173 6 0 chr18 23977446 23977614 -62699934 - MER2 DNA MER2_type -175 170 2 195 393 50 0 chr18 23977961 23978101 -62699447 - L2 LINE L2 -858 2456 2310 193 311 0 16 chr18 23979108 23979169 -62698379 + L2 LINE L2 3254 3313 0 2082 119 3 3 chr18 23979195 23979489 -62698059 + AluSg SINE Alu 1 294 -16 2423 63 3 3 chr18 23979619 23979919 -62697629 + AluY SINE Alu 1 300 -11 255 248 109 50 chr18 23982526 23982664 -62694884 + MIR SINE MIR 37 186 -67 36894 53 3 0 chr18 23983288 23989412 -62688136 + L1PA5 LINE L1 11 6149 -5 1269 207 59 8 chr18 23989535 23989981 -62687567 + MLT1E3 LTR MaLR 1 508 -116 3855 173 64 3 chr18 23990042 23990810 -62686738 + L1MB7 LINE L1 5365 6179 -5 587 229 6 12 chr18 23990814 23990980 -62686568 + L1ME LINE L1 841 1005 -5065 1081 248 69 51 chr18 23990982 23991173 -62686375 + L1ME LINE L1 2191 2377 -3703 1546 195 50 3 chr18 23991173 23991455 -62686093 + AluJo SINE Alu 3 297 -15 1081 248 69 51 chr18 23991455 23991755 -62685793 + L1ME LINE L1 2377 2691 -3389 5332 66 7 21 chr18 23991761 23992794 -62684754 + L1P2 LINE L1 4637 5646 -508 2107 129 0 10 chr18 23992990 23993301 -62684247 - AluSx SINE Alu -3 309 2 21 0 0 0 chr18 23994059 23994080 -62683468 + AT_rich Low_complexity Low_complexity 1 21 0 1352 174 116 18 chr18 23994273 23994549 -62682999 + AluJo SINE Alu 1 303 -9 562 240 0 23 chr18 23994590 23994719 -62682829 - MER94 DNA DNA -3 131 6 1649 165 30 8 chr18 23994720 23994986 -62682562 + AluJb SINE Alu 1 272 -40 2313 97 3 7 chr18 23995016 23995325 -62682223 + AluSc SINE Alu 1 308 -1 180 337 41 51 chr18 23995781 23995879 -62681669 + MIR SINE MIR 20 116 -92 182 204 114 0 chr18 23995995 23996039 -62681509 - L2 LINE L2 -292 2980 2932 312 271 9 56 chr18 23996174 23996281 -62681267 + MIR SINE MIR 91 192 -70 23 0 0 29 chr18 23996665 23996677 -62680871 + AT_rich Low_complexity Low_complexity 1 12 -21 1803 165 0 7 chr18 23996677 23996968 -62680580 + AluJb SINE Alu 1 289 -23 23 0 0 29 chr18 23996968 23996989 -62680559 + AT_rich Low_complexity Low_complexity 12 33 0 392 338 84 25 chr18 23998023 23998343 -62679205 + LTR16C LTR ERVL 151 489 -2 356 236 81 57 chr18 23998597 23998720 -62678828 - MER5A DNA MER1_type -63 126 1 1162 199 135 26 chr18 23999134 23999401 -62678147 - AluJo SINE Alu -6 296 1 23 54 0 0 chr18 23999553 23999590 -62677958 + AT_rich Low_complexity Low_complexity 1 37 0 1948 155 17 0 chr18 23999590 23999887 -62677661 + AluSx SINE Alu 1 302 -10 265 172 0 24 chr18 24000572 24000765 -62676783 + AluJo SINE Alu 44 300 -2 1871 186 3 22 chr18 24000851 24001206 -62676342 + MER7A DNA MER2_type 1 346 0 2320 91 3 0 chr18 24001427 24001723 -62675825 - AluSg SINE Alu -13 297 1 603 254 89 38 chr18 24001906 24002142 -62675406 - MIR SINE MIR -7 255 8 275 317 72 60 chr18 24002970 24003137 -62674411 + MIR3 SINE MIR 34 202 -6 213 39 0 0 chr18 24004600 24004626 -62672922 + (A)n Simple_repeat Simple_repeat 1 26 0 209 412 72 0 chr18 24004661 24004758 -62672790 - L2 LINE L2 -159 3113 3010 25 51 0 0 chr18 24005059 24005098 -62672450 + AT_rich Low_complexity Low_complexity 1 39 0 1604 184 10 16 chr18 24005275 24005584 -62671964 + AluJo SINE Alu 1 307 -5 2240 80 0 10 chr18 24006032 24006332 -62671216 + AluY SINE Alu 1 297 -14 265 298 87 19 chr18 24006350 24006454 -62671094 + MIR SINE MIR 75 185 -77 411 234 0 0 chr18 24006885 24006962 -62670586 + AluJ/FLAM SINE Alu 1 77 -225 * 1439 100 36 18 chr18 24006961 24007181 -62670367 + THE1C LTR MaLR 72 295 -80 4425 103 7 5 chr18 24007182 24007794 -62669754 + THE1C-int LTR MaLR 968 1580 0 2302 103 62 14 chr18 24007794 24008152 -62669396 + THE1C LTR MaLR 1 375 0 28 0 0 0 chr18 24008155 24008183 -62669365 + AT_rich Low_complexity Low_complexity 1 28 0 389 252 252 28 chr18 24008704 24008918 -62668630 + LTR16B LTR ERVL 203 464 0 202 271 0 0 chr18 24009395 24009443 -62668105 - MIR SINE MIR -65 197 150 348 292 45 55 chr18 24009460 24009662 -62667886 + L2 LINE L2 2037 2236 -1078 434 319 111 27 chr18 24009701 24009987 -62667561 + L2 LINE L2 2720 3034 -279 1803 201 64 29 chr18 24009999 24010408 -62667140 + MER21B LTR ERV1 388 810 -53 1392 180 62 18 chr18 24011000 24011272 -62666276 - AluJo SINE Alu -23 289 6 1638 158 60 11 chr18 24011325 24011610 -62665938 - AluJo SINE Alu -13 299 1 539 286 115 17 chr18 24012692 24012926 -62664622 + MIR SINE MIR 5 261 -1 243 0 0 0 chr18 24013516 24013543 -62664005 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 24 32 0 0 chr18 24014700 24014731 -62662817 + AT_rich Low_complexity Low_complexity 1 31 0 1943 112 18 4 chr18 24016229 24016507 -62661041 + AluSp SINE Alu 1 282 -31 369 62 0 0 chr18 24016510 24016558 -62660990 + (TAAAA)n Simple_repeat Simple_repeat 2 49 0 868 135 35 7 chr18 24017019 24017160 -62660388 + AluJ SINE Alu 1 145 -167 1043 176 6 0 chr18 24017202 24017372 -62660176 + AluJ SINE Alu 131 301 -11 1700 181 0 3 chr18 24017376 24017714 -62659834 + AluJb SINE Alu 1 337 0 1843 134 45 0 chr18 24017725 24018017 -62659531 + AluJb SINE Alu 1 305 -7 2165 143 48 35 chr18 24018044 24018442 -62659106 + L1PA15 LINE L1 5742 6144 -21 1935 140 14 7 chr18 24019101 24019394 -62658154 + AluSx SINE Alu 1 295 -17 453 205 55 106 chr18 24020053 24020346 -62657202 + L1MC5 LINE L1 7639 7916 -45 351 281 94 0 chr18 24020575 24020703 -62656845 - MIR SINE MIR -76 186 47 1713 58 31 0 chr18 24020740 24020965 -62656583 + L1PA5 LINE L1 5907 6138 -16 784 186 103 21 chr18 24021692 24021886 -62655662 + L2 LINE L2 1895 2104 -1210 384 222 25 88 chr18 24021886 24022126 -62655422 + MER106B DNA MER1_type 4 1056 -3 1023 236 46 46 chr18 24022139 24022466 -62655082 + L2 LINE L2 2120 2446 -868 1022 232 287 11 chr18 24022461 24022827 -62654721 + L2 LINE L2 2847 3313 0 * 22 35 0 0 chr18 24022851 24022880 -62654668 + AT_rich Low_complexity Low_complexity 1 29 0 29 28 0 0 chr18 24023231 24023267 -62654281 + AT_rich Low_complexity Low_complexity 1 36 0 817 207 0 7 chr18 24023509 24023659 -62653889 + FRAM SINE Alu 1 149 -27 2156 106 0 0 chr18 24023953 24024258 -62653290 - AluY SINE Alu 0 305 1 513 322 53 29 chr18 24025117 24025325 -62652223 + MIR SINE MIR 21 233 -29 429 275 228 14 chr18 24026463 24026674 -62650874 - MIR SINE MIR -1 261 6 273 315 27 0 chr18 24026715 24026788 -62650760 + L2 LINE L2 2641 2715 -599 2512 59 7 0 chr18 24026788 24027092 -62650456 + AluY SINE Alu 1 306 -5 296 119 0 0 chr18 24027099 24027141 -62650407 + Alu SINE Alu 12 53 -249 1189 134 0 0 chr18 24027171 24027343 -62650205 + FRAM SINE Alu 1 164 -12 1070 259 96 68 chr18 24027350 24027803 -62649745 + L2 LINE L2 2702 3174 -139 2111 124 0 0 chr18 24027803 24028094 -62649454 - AluSx SINE Alu -21 291 1 1070 259 96 68 chr18 24028094 24028234 -62649314 + L2 LINE L2 3174 3309 -4 26 0 0 0 chr18 24028699 24028725 -62648823 + AT_rich Low_complexity Low_complexity 1 26 0 231 0 0 71 chr18 24028725 24028767 -62648781 + (TAAAA)n Simple_repeat Simple_repeat 3 41 0 1964 132 17 7 chr18 24028776 24029072 -62648476 - AluSx SINE Alu -13 299 1 1201 112 70 0 chr18 24029075 24029289 -62648259 - L1MA7 LINE L1 0 6291 6063 834 300 139 52 chr18 24029993 24030490 -62647058 + L3 LINE CR1 1019 1558 -19 225 0 0 0 chr18 24030836 24030861 -62646687 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 936 228 119 39 chr18 24031355 24031667 -62645881 - MER46C DNA MER2_type -1 337 1 201 296 0 0 chr18 24032107 24032151 -62645397 + L3 LINE CR1 1026 1069 -508 495 326 88 9 chr18 24032170 24032385 -62645163 + MIR SINE MIR 1 232 -30 39 60 0 0 chr18 24032565 24032632 -62644916 + AT_rich Low_complexity Low_complexity 1 67 0 1729 144 15 0 chr18 24033300 24033564 -62643984 + AluSx SINE Alu 1 268 -44 216 0 0 0 chr18 24033571 24033595 -62643953 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 189 363 33 0 chr18 24037525 24037616 -62639932 - L2 LINE L2 0 3313 3220 414 256 135 26 chr18 24037798 24037954 -62639594 - MER5A DNA MER1_type -1 188 16 280 313 0 0 chr18 24038032 24038099 -62639449 + L2 LINE L2 3234 3300 -13 753 248 55 46 chr18 24038430 24038559 -62638989 - MER58A DNA MER1_type -2199 221 88 4003 180 89 19 chr18 24038559 24039365 -62638183 + MER21B LTR ERV1 1 863 0 753 248 55 46 chr18 24039365 24039453 -62638095 - MER58A DNA MER1_type -2332 88 2 488 287 118 38 chr18 24039493 24039730 -62637818 + MIR SINE MIR 1 256 -6 485 290 107 72 chr18 24039740 24040254 -62637294 + HAL1 LINE L1 6 537 -1970 1906 192 79 46 chr18 24040269 24040748 -62636800 - MLT1D LTR MaLR -8 497 3 291 341 37 52 chr18 24040748 24040883 -62636665 + HAL1 LINE L1 538 670 -1837 931 212 9 77 chr18 24040920 24041142 -62636406 + MER20 DNA MER1_type 12 218 -1 439 236 26 47 chr18 24041199 24041432 -62636116 + HAL1 LINE L1 865 1092 -1415 6906 206 130 87 chr18 24041467 24043617 -62633931 + L1M4 LINE L1 2181 4237 -1909 720 229 0 0 chr18 24043617 24043757 -62633791 + AluJb SINE Alu 134 273 -39 6906 206 130 87 chr18 24043757 24043911 -62633637 + L1M4 LINE L1 4237 4383 -1763 759 179 238 0 chr18 24043911 24044079 -62633469 + MER63A DNA MER1_type 2 209 -1 6906 206 130 87 chr18 24044079 24044588 -62632960 + L1M4 LINE L1 4383 5261 -885 1062 162 11 0 chr18 24044588 24044767 -62632781 + AluJb SINE Alu 121 301 -11 2111 125 3 0 chr18 24044819 24045116 -62632432 + AluSq SINE Alu 1 298 -15 21 36 0 0 chr18 24045531 24045559 -62631989 + AT_rich Low_complexity Low_complexity 1 28 0 200 203 14 29 chr18 24045861 24045930 -62631618 + A-rich Low_complexity Low_complexity 6 73 0 579 184 9 18 chr18 24046029 24046143 -62631405 + FLAM_C SINE Alu 21 133 -10 22 35 0 0 chr18 24046297 24046326 -62631222 + AT_rich Low_complexity Low_complexity 1 29 0 2161 102 0 30 chr18 24046510 24046814 -62630734 - AluSg SINE Alu -15 295 1 250 236 137 47 chr18 24046915 24046957 -62630591 - MIR SINE MIR 0 262 225 1969 141 21 0 chr18 24046957 24047241 -62630307 - AluSx SINE Alu -22 290 1 250 236 137 47 chr18 24047241 24047259 -62630289 - MIR SINE MIR -37 225 210 2028 125 68 37 chr18 24047259 24047612 -62629936 + THE1B LTR MaLR 1 364 0 250 236 137 47 chr18 24047612 24047735 -62629813 - MIR SINE MIR -52 210 2 1495 133 13 144 chr18 24049013 24049279 -62628269 - MLT1B LTR MaLR -61 329 124 401 190 20 10 chr18 24049279 24049379 -62628169 + U13 snRNA snRNA 2 102 -2 1495 133 13 144 chr18 24049379 24049487 -62628061 - MLT1B LTR MaLR -266 124 4 1630 185 13 7 chr18 24050539 24050837 -62626711 - AluJo SINE Alu 0 312 13 28 79 0 0 chr18 24050894 24050957 -62626591 + AT_rich Low_complexity Low_complexity 1 63 0 629 296 104 17 chr18 24051741 24051971 -62625577 + MIR SINE MIR 2 251 -11 1242 143 73 77 chr18 24052108 24052408 -62625140 + L1MA8 LINE L1 5988 6286 -5 231 88 0 0 chr18 24053054 24053088 -62624460 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 398 291 125 6 chr18 24053129 24053513 -62624035 - Charlie7 DNA MER1_type -1969 643 193 433 188 24 12 chr18 24053966 24054051 -62623497 + MLT1G1 LTR MaLR 6 91 -504 2916 210 70 58 chr18 24054052 24054305 -62623243 + L1MD1 LINE L1 5351 5599 -643 1568 123 17 4 chr18 24054305 24054541 -62623007 + AluSg/x SINE Alu 72 310 0 2916 210 70 58 chr18 24054541 24055157 -62622391 + L1MD1 LINE L1 5599 6231 -11 230 219 16 0 chr18 24055175 24055239 -62622309 + L1MD3 LINE L1 7921 7985 -10 554 154 31 0 chr18 24055345 24055475 -62622073 - L1M4 LINE L1 -3215 2931 2798 761 94 51 0 chr18 24055501 24055618 -62621930 - L1PA7 LINE L1 0 6154 6032 23 33 0 0 chr18 24156491 24156521 -62521027 + AT_rich Low_complexity Low_complexity 1 30 0 1657 163 36 23 chr18 24156521 24156822 -62520726 - AluJo SINE Alu -7 305 1 373 190 215 16 chr18 24156831 24156952 -62520596 - L1MA8 LINE L1 0 6291 6147 2172 128 7 7 chr18 24157454 24157759 -62519789 + AluSx SINE Alu 1 305 -7 1680 68 0 0 chr18 24157806 24158025 -62519523 - L1PA7 LINE L1 0 6154 5936 24 0 0 0 chr18 24158553 24158577 -62518971 + AT_rich Low_complexity Low_complexity 1 24 0 1222 89 75 28 chr18 24158678 24158892 -62518656 - L1PA10 LINE L1 0 6168 5945 1284 193 5 0 chr18 24159275 24159493 -62518055 - AluJb SINE Alu -2 310 92 1995 150 3 16 chr18 24159965 24160278 -62517270 + AluJb SINE Alu 1 309 -3 1367 184 32 6 chr18 24160469 24160785 -62516763 + MER33 DNA MER1_type 1 324 0 186 43 0 0 chr18 24160791 24160814 -62516734 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 2208 97 3 17 chr18 24160814 24161104 -62516444 - AluSq SINE Alu -27 286 1 321 314 191 27 chr18 24161199 24161419 -62516129 - MIR SINE MIR 0 262 7 1671 237 111 22 chr18 24162191 24162699 -62514849 + MLT1H1 LTR MaLR 2 547 -8 506 260 101 24 chr18 24162977 24163127 -62514421 - L2 LINE L2 0 3313 3141 2084 121 0 36 chr18 24163127 24163434 -62514114 + AluSx SINE Alu 4 299 -13 506 260 101 24 chr18 24163434 24163491 -62514057 - L2 LINE L2 -172 3141 3090 2612 50 136 5 chr18 24164015 24164411 -62513137 - LTR7 LTR ERV1 -2 448 1 2202 106 50 13 chr18 24164411 24164789 -62512759 - HERVH LTR ERV1 0 7713 7322 1396 116 19 0 chr18 24164787 24165003 -62512545 - HERVH LTR ERV1 -1894 5819 5600 * 3604 147 2 7 chr18 24165004 24165582 -62511966 - HERVH LTR ERV1 -2564 5149 4575 1290 83 17 0 chr18 24165579 24165759 -62511789 - HERVH LTR ERV1 -3043 4670 4488 * 6070 80 3 2 chr18 24165761 24166614 -62510934 - HERVH LTR ERV1 -3720 3993 3140 * 15623 92 11 21 chr18 24166600 24168992 -62508556 - HERVH LTR ERV1 -4721 2992 439 389 109 0 0 chr18 24168997 24169052 -62508496 - LTR7 LTR ERV1 -395 55 1 2543 145 9 9 chr18 24169334 24169776 -62507772 - MER4D LTR ERV1 -1 902 461 3211 140 14 39 chr18 24169780 24170224 -62507324 + MER41B LTR ERV1 65 519 -116 2362 110 3 0 chr18 24170224 24170534 -62507014 - AluSx SINE Alu -1 311 1 3211 140 14 39 chr18 24170534 24170560 -62506988 + MER41B LTR ERV1 519 544 -91 1900 135 57 7 chr18 24170560 24170857 -62506691 - AluJb SINE Alu 0 312 1 3211 140 14 39 chr18 24170857 24170971 -62506577 + MER41B LTR ERV1 544 635 0 843 186 124 11 chr18 24170971 24171148 -62506400 - MER4D LTR ERV1 -706 197 1 1400 143 25 90 chr18 24172414 24172435 -62505113 - L1MB7 LINE L1 0 6184 6163 1799 183 6 19 chr18 24172435 24172746 -62504802 + AluJb SINE Alu 1 307 -5 1400 143 25 90 chr18 24172746 24173046 -62504502 - L1MB7 LINE L1 -21 6163 5884 408 152 0 0 chr18 24173991 24174057 -62503491 - MLT1B LTR MaLR 0 467 402 824 115 0 33 chr18 24174057 24174179 -62503369 + FLAM_C SINE Alu 1 118 -15 249 159 0 0 chr18 24174198 24174242 -62503306 + (TG)n Simple_repeat Simple_repeat 1 44 0 1339 150 60 96 chr18 24174284 24174618 -62502930 - MLT1B LTR MaLR -53 337 16 730 275 41 90 chr18 24174623 24175012 -62502536 + MLT1J LTR MaLR 50 419 -92 1867 153 6 31 chr18 24175017 24175337 -62502211 - AluJo SINE Alu 0 312 1 666 243 151 10 chr18 24175936 24176142 -62501406 + MLT1H LTR MaLR 9 243 -306 759 203 112 59 chr18 24176144 24176467 -62501081 + MER31B LTR ERV1 1 466 0 791 210 222 25 chr18 24176471 24176556 -62500992 + MLT1H LTR MaLR 246 313 -236 2063 127 5 46 chr18 24176556 24176926 -62500622 - THE1A LTR MaLR 0 355 1 791 210 222 25 chr18 24176926 24177083 -62500465 + MLT1H LTR MaLR 313 536 -13 1288 193 18 60 chr18 24177633 24177674 -62499874 - L1MB4 LINE L1 -6 6174 6133 2473 61 0 3 chr18 24177674 24177968 -62499580 + AluY SINE Alu 1 293 -18 1288 193 18 60 chr18 24177968 24178257 -62499291 - L1MB4 LINE L1 -47 6133 5858 585 0 0 0 chr18 24178403 24178468 -62499080 + (CACAG)n Simple_repeat Simple_repeat 4 68 0 605 203 4 0 chr18 24178903 24179153 -62498395 + (CA)n Simple_repeat Simple_repeat 1 251 0 1827 178 0 10 chr18 24179826 24180130 -62497418 + AluJb SINE Alu 1 301 -11 243 0 0 0 chr18 24180426 24180453 -62497095 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 270 352 80 28 chr18 24180530 24180891 -62496657 + L2 LINE L2 1272 1651 -1663 592 274 195 3 chr18 24181052 24181370 -62496178 - MER110A LTR ERV1 -54 414 36 1078 119 0 0 chr18 24181602 24181745 -62495803 - FRAM SINE Alu -15 161 19 3347 168 50 61 chr18 24181852 24182574 -62494974 - MER21B LTR ERV1 -149 714 1 198 291 62 84 chr18 24182627 24182696 -62494852 - MIR SINE MIR -2 260 191 2238 150 6 11 chr18 24182696 24183062 -62494486 - THE1B LTR MaLR 0 364 1 8925 120 66 10 chr18 24183062 24184558 -62492990 - THE1C-int LTR MaLR 0 1580 1 2576 84 25 3 chr18 24184558 24184925 -62492623 - THE1C LTR MaLR 0 375 1 198 291 62 84 chr18 24184925 24185032 -62492516 - MIR SINE MIR -68 194 86 309 51 0 0 chr18 24185237 24185276 -62492272 + (CA)n Simple_repeat Simple_repeat 2 40 0 422 280 107 30 chr18 24185509 24185677 -62491871 - MER5A DNA MER1_type -2 187 7 218 227 0 0 chr18 24187700 24187744 -62489804 - L2 LINE L2 -19 3294 3251 22 0 0 0 chr18 24188070 24188092 -62489456 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 24188233 24188254 -62489294 + AT_rich Low_complexity Low_complexity 1 21 0 393 271 21 49 chr18 24188783 24188927 -62488621 - LTR33 LTR ERVL -308 213 74 1952 155 94 42 chr18 24188941 24189118 -62488430 + MSTA LTR MaLR 2 168 -260 1703 168 54 4 chr18 24189118 24189398 -62488150 + AluJb SINE Alu 1 294 -18 2664 65 0 0 chr18 24189402 24189709 -62487839 + AluSg SINE Alu 1 307 -3 1952 155 94 42 chr18 24189709 24189932 -62487616 + MSTA LTR MaLR 170 428 0 219 288 0 15 chr18 24190005 24190071 -62487477 - L2 LINE L2 -2 3311 3247 274 324 38 13 chr18 24190880 24191065 -62486483 + MIR SINE MIR 24 253 -9 252 313 0 0 chr18 24192053 24192120 -62485428 - MER5A DNA MER1_type -114 75 9 507 235 95 40 chr18 24192154 24192428 -62485120 + Tigger5 DNA MER2_type 9 2239 -84 1717 146 75 7 chr18 24192429 24192709 -62484839 - AluJb SINE Alu -13 299 1 949 193 0 23 chr18 24192734 24192910 -62484638 - AluJo SINE Alu -30 282 111 367 327 33 13 chr18 24197059 24197212 -62480336 - MIR SINE MIR -58 204 49 2138 114 3 13 chr18 24197286 24197592 -62479956 + AluSq SINE Alu 9 311 -2 25 0 0 0 chr18 24198148 24198173 -62479375 + AT_rich Low_complexity Low_complexity 1 25 0 2083 152 0 3 chr18 24198202 24198505 -62479043 + AluJo SINE Alu 1 302 -10 1944 176 103 2 chr18 24198754 24199161 -62478387 + MER74A LTR ERVL 5 452 -106 1468 198 55 15 chr18 24199161 24199504 -62478044 + MLT1A2 LTR MaLR 1 357 -17 383 165 85 20 chr18 24199520 24199627 -62477921 + MER74B LTR ERVL 452 591 0 2372 108 0 0 chr18 24200557 24200862 -62476686 - AluSx SINE Alu -7 305 1 530 305 92 29 chr18 24201415 24201654 -62475894 + MIR SINE MIR 9 262 0 1822 159 67 33 chr18 24201661 24201962 -62475586 - L1MB3 LINE L1 0 6183 5865 2388 91 3 0 chr18 24201962 24202259 -62475289 - AluSq SINE Alu -15 298 1 1822 159 67 33 chr18 24202259 24202346 -62475202 - L1MB3 LINE L1 -318 5865 5782 2160 125 7 0 chr18 24202596 24202892 -62474656 - AluSx SINE Alu -14 298 1 182 279 22 110 chr18 24204345 24204481 -62473067 + MIR SINE MIR 93 216 -46 321 304 36 18 chr18 24204504 24204616 -62472932 + MER5A DNA MER1_type 62 175 -14 2241 117 10 0 chr18 24205218 24205517 -62472031 - AluSq SINE Alu -11 302 1 225 0 0 0 chr18 24205524 24205549 -62471999 + (A)n Simple_repeat Simple_repeat 1 25 0 428 246 18 0 chr18 24205549 24205659 -62471889 - FLAM_A SINE Alu -26 116 5 340 306 16 0 chr18 24206339 24206460 -62471088 + MIR SINE MIR 13 135 -127 2151 133 7 3 chr18 24207070 24207370 -62470178 + AluSx SINE Alu 1 301 -11 2562 69 0 0 chr18 24207372 24207677 -62469871 + AluY SINE Alu 1 305 -6 2285 91 7 10 chr18 24207780 24208077 -62469471 - AluSc SINE Alu -13 296 1 2011 115 30 17 chr18 24208542 24208837 -62468711 - AluSx SINE Alu -13 299 1 2340 86 7 3 chr18 24210172 24210463 -62467085 - AluSq SINE Alu -12 301 10 189 0 0 0 chr18 24210573 24210594 -62466954 + (A)n Simple_repeat Simple_repeat 1 21 0 249 172 0 69 chr18 24210803 24210861 -62466687 + MER69 DNA AcHobo 2461 2514 -12 273 179 62 9 chr18 24210955 24211067 -62466481 + (TA)n Simple_repeat Simple_repeat 2 119 0 2227 119 0 7 chr18 24211774 24212069 -62465479 - AluSq SINE Alu -20 293 1 1272 233 90 11 chr18 24212339 24212515 -62465033 + L1ME2 LINE L1 5602 5763 -401 2091 117 10 32 chr18 24212515 24212824 -62464724 - AluSq SINE Alu -11 302 1 1272 233 90 11 chr18 24212824 24213012 -62464536 + L1ME2 LINE L1 5763 5995 -169 227 167 0 0 chr18 24213036 24213072 -62464476 + MER3 DNA MER1_type 15 50 -159 180 270 48 0 chr18 24213813 24213876 -62463672 + L2 LINE L2 2988 3053 -219 2217 133 0 0 chr18 24213927 24214227 -62463321 - AluSx SINE Alu -12 300 1 189 307 107 36 chr18 24214281 24214421 -62463127 + L2 LINE L2 3164 3313 0 946 280 72 0 chr18 24218258 24218562 -62458986 + MER46C DNA MER2_type 1 326 -12 2418 99 0 3 chr18 24219815 24220128 -62457420 - AluSq SINE Alu -1 312 1 815 229 0 0 chr18 24220352 24220496 -62457052 - FRAM SINE Alu -32 144 1 392 272 154 18 chr18 24220498 24220667 -62456881 - MIR SINE MIR -6 256 65 568 293 73 0 chr18 24220772 24220936 -62456612 - MER5B DNA MER1_type 0 178 3 831 202 79 0 chr18 24222637 24222815 -62454733 + MER3 DNA MER1_type 1 192 -17 2568 60 3 0 chr18 24223673 24223972 -62453576 - AluY SINE Alu -11 300 1 2324 83 3 17 chr18 24224631 24224933 -62452615 - AluSq SINE Alu -15 298 1 23 33 0 0 chr18 24225290 24225320 -62452228 + AT_rich Low_complexity Low_complexity 1 30 0 2385 108 0 0 chr18 24227645 24227942 -62449606 - AluSg SINE Alu -13 297 1 387 273 52 7 chr18 24228599 24228753 -62448795 + L1ME4a LINE L1 5942 6102 -19 2186 121 7 0 chr18 24228897 24229195 -62448353 + AluJb SINE Alu 1 300 -12 2489 78 0 3 chr18 24229195 24229502 -62448046 + AluY SINE Alu 1 306 -5 2387 86 3 3 chr18 24230464 24230766 -62446782 - AluSg SINE Alu -8 302 1 320 186 0 93 chr18 24231423 24231520 -62446028 - L1MC4 LINE L1 -1139 6703 6559 210 37 0 0 chr18 24231520 24231547 -62446001 + (GA)n Simple_repeat Simple_repeat 2 28 0 473 226 115 51 chr18 24233576 24233793 -62443755 + MIR SINE MIR 32 262 0 300 281 22 11 chr18 24234328 24234417 -62443131 - MIR3 SINE MIR -32 176 87 210 256 93 35 chr18 24234836 24234922 -62442626 + L2 LINE L2 3198 3288 -25 206 279 28 45 chr18 24235474 24235653 -62441895 + (CAGGG)n Simple_repeat Simple_repeat 4 179 0 21 36 0 0 chr18 24236432 24236460 -62441088 + AT_rich Low_complexity Low_complexity 1 28 0 2125 153 0 3 chr18 24236681 24236994 -62440554 + AluJo SINE Alu 1 312 0 188 208 42 21 chr18 24237001 24237049 -62440499 + MIR SINE MIR 108 156 -106 218 307 119 0 chr18 24237364 24237465 -62440083 - MIR SINE MIR -46 216 104 2642 58 0 3 chr18 24238010 24238321 -62439227 + AluY SINE Alu 1 310 -1 189 288 189 38 chr18 24238328 24238460 -62439088 + L2 LINE L2 3160 3311 -2 267 308 92 23 chr18 24241135 24241265 -62436283 + L2 LINE L2 2914 3052 -220 654 300 53 0 chr18 24241592 24241819 -62435729 + MIR SINE MIR 13 251 -11 200 302 94 0 chr18 24242248 24242301 -62435247 - MIR SINE MIR -2 260 203 375 202 36 0 chr18 24244622 24244706 -62432842 + MLT1C LTR MaLR 1 87 -380 656 168 0 0 chr18 24244711 24244812 -62432736 - Tigger7 DNA MER2_type -5 2482 2382 977 202 27 11 chr18 24244825 24245008 -62432540 - Tigger7 DNA MER2_type -2257 230 45 1048 234 79 28 chr18 24245021 24245376 -62432172 + MLT1C LTR MaLR 86 458 -9 519 298 126 61 chr18 24246371 24246713 -62430835 - L2 LINE L2 -13 3259 2896 1755 158 17 3 chr18 24246954 24247246 -62430302 + AluJo SINE Alu 2 297 -15 1026 205 145 4 chr18 24247962 24248196 -62429352 - MLT1C LTR MaLR -27 440 174 804 185 0 32 chr18 24248203 24248360 -62429188 - FRAM SINE Alu -30 146 1 1053 147 6 0 chr18 24248360 24248517 -62429031 - MLT1C LTR MaLR -288 179 22 2135 112 0 19 chr18 24248570 24248882 -62428666 + AluSx SINE Alu 1 306 -6 2150 110 51 37 chr18 24249093 24249448 -62428100 + THE1B LTR MaLR 2 361 -3 326 185 0 0 chr18 24249468 24249522 -62428026 + THE1B LTR MaLR 311 364 0 2333 54 7 7 chr18 24251063 24251360 -62426188 - AluY SINE Alu -14 297 1 207 0 0 0 chr18 24251997 24252020 -62425528 + (TTCC)n Simple_repeat Simple_repeat 4 26 0 184 249 55 101 chr18 24252020 24252272 -62425276 + L2 LINE L2 2864 3103 -210 734 186 109 0 chr18 24252454 24252610 -62424938 - L1MB4 LINE L1 -159 6021 5849 446 343 144 56 chr18 24252686 24253490 -62424058 - L3 LINE CR1 -495 1082 208 2242 71 0 10 chr18 24253502 24253796 -62423752 + AluY SINE Alu 1 291 -20 287 178 0 0 chr18 24253974 24254019 -62423529 - L2 LINE L2 -5 3267 3223 2773 177 55 50 chr18 24254194 24254854 -62422694 - L1MB4 LINE L1 -2 6178 5516 2027 200 53 22 chr18 24255129 24255618 -62421930 - MLT1D LTR MaLR 0 505 2 1787 153 3 7 chr18 24255794 24256088 -62421460 - AluJb SINE Alu -19 293 1 21 0 0 0 chr18 24260244 24260265 -62417283 + AT_rich Low_complexity Low_complexity 1 21 0 2175 96 0 0 chr18 24260571 24260872 -62416676 + AluSx SINE Alu 1 301 -11 749 147 107 60 chr18 24261001 24261151 -62416397 - AluJo SINE Alu -8 294 138 408 272 67 48 chr18 24262542 24262723 -62414825 - MIR3 SINE MIR -18 190 7 1338 187 57 33 chr18 24262784 24263083 -62414465 - AluJo SINE Alu -6 306 1 733 148 7 63 chr18 24263109 24263251 -62414297 - AluJo SINE Alu -178 134 1 275 355 174 0 chr18 24264271 24264426 -62413122 + MIR SINE MIR 20 201 -61 184 405 8 8 chr18 24264514 24264635 -62412913 - L3 LINE CR1 -68 1509 1389 238 289 66 0 chr18 24267238 24267314 -62410234 - L2 LINE L2 -54 3218 3138 918 190 118 0 chr18 24267513 24267708 -62409840 + MER20 DNA MER1_type 1 218 -1 192 297 95 0 chr18 24267788 24267862 -62409686 + L2 LINE L2 3143 3223 -49 655 281 40 10 chr18 24267949 24268148 -62409400 - Charlie8 DNA MER1_type -2141 276 72 2187 111 0 3 chr18 24268789 24269095 -62408453 + AluSx SINE Alu 1 305 -7 817 144 0 15 chr18 24269106 24269238 -62408310 + AluJo/FLAM SINE Alu 3 132 -170 1666 75 0 31 chr18 24269238 24269465 -62408083 + AluY SINE Alu 80 299 -12 27 0 0 0 chr18 24269528 24269555 -62407993 + AT_rich Low_complexity Low_complexity 1 27 0 206 73 55 18 chr18 24269566 24269621 -62407927 + (TATAA)n Simple_repeat Simple_repeat 5 61 0 208 147 67 13 chr18 24269653 24269728 -62407820 + (TA)n Simple_repeat Simple_repeat 2 80 0 183 80 0 0 chr18 24269728 24269753 -62407795 + (GA)n Simple_repeat Simple_repeat 2 26 0 532 279 147 11 chr18 24270596 24270786 -62406762 + MIR SINE MIR 47 262 0 201 425 19 0 chr18 24270896 24271002 -62406546 + L3b LINE CR1 1419 1526 -57 258 241 0 0 chr18 24271045 24271103 -62406445 + L2 LINE L2 3214 3271 -1 2420 66 3 0 chr18 24271471 24271776 -62405772 - AluSp SINE Alu -7 306 1 250 279 95 25 chr18 24273302 24273460 -62404088 - L2 LINE L2 -255 3058 2890 746 241 132 50 chr18 24273464 24273891 -62403657 + L2 LINE L2 2258 3025 -288 261 0 0 0 chr18 24274019 24274048 -62403500 + (TC)n Simple_repeat Simple_repeat 2 30 0 225 0 0 0 chr18 24274047 24274072 -62403476 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1653 195 59 3 chr18 24274075 24274398 -62403150 + MER2 DNA MER2_type 1 341 -3 315 0 0 0 chr18 24274399 24274434 -62403114 + (TG)n Simple_repeat Simple_repeat 2 36 0 189 151 57 0 chr18 24274463 24274516 -62403032 + (TA)n Simple_repeat Simple_repeat 1 56 0 460 235 15 52 chr18 24274549 24274685 -62402863 + L1ME3A LINE L1 6031 6161 -9 1787 130 43 13 chr18 24276263 24276563 -62400985 - AluJb SINE Alu -3 309 1 228 309 32 16 chr18 24276578 24276704 -62400844 - L1M4 LINE L1 -2391 3755 3628 223 281 16 31 chr18 24277871 24277935 -62399613 + L2 LINE L2 3118 3180 -92 2391 68 0 0 chr18 24278018 24278327 -62399221 + AluY SINE Alu 3 311 0 513 226 178 0 chr18 24281134 24281280 -62396268 + MER5A DNA MER1_type 11 182 -7 531 257 43 21 chr18 24281993 24282234 -62395314 - MIR SINE MIR -3 259 16 344 321 88 25 chr18 24282278 24282325 -62395223 + MER5B DNA MER1_type 1 44 -134 252 0 0 0 chr18 24282325 24282353 -62395195 + (CA)n Simple_repeat Simple_repeat 2 29 0 344 321 88 25 chr18 24282353 24282464 -62395084 + MER5B DNA MER1_type 44 169 -9 389 97 0 5 chr18 24282628 24282685 -62394863 - L1P4 LINE L1 -603 5562 5508 311 314 10 20 chr18 24282695 24282797 -62394751 - L1ME3A LINE L1 -2 6168 6068 2021 108 10 0 chr18 24282912 24283207 -62394341 - AluSx SINE Alu -14 298 1 1113 180 99 23 chr18 24283246 24283639 -62393909 - L1M4 LINE L1 -645 5529 5101 2140 116 0 0 chr18 24284021 24284313 -62393235 - AluSx SINE Alu -20 292 1 1146 115 0 0 chr18 24284414 24284615 -62392933 - AluSg/x SINE Alu 0 326 126 2161 82 20 3 chr18 24284615 24284908 -62392640 - AluSq SINE Alu -15 298 1 810 270 105 59 chr18 24284967 24285803 -62391745 - L1MCc LINE L1 -4829 2293 1227 1964 127 7 0 chr18 24286633 24286924 -62390624 - AluJb SINE Alu -19 293 1 1323 142 37 166 chr18 24288808 24288966 -62388582 + MLT1A2 LTR MaLR 1 178 -196 2001 116 6 19 chr18 24288966 24289277 -62388271 + AluSx SINE Alu 1 307 -5 1323 142 37 166 chr18 24289277 24289547 -62388001 + MLT1A2 LTR MaLR 178 374 0 224 250 54 11 chr18 24289867 24289959 -62387589 - L2 LINE L2 -249 3023 2928 321 301 65 24 chr18 24290237 24290360 -62387188 + MIR SINE MIR 20 147 -61 26037 56 4 1 chr18 24291342 24295379 -62382169 + L1PA6 LINE L1 2108 6154 0 652 103 10 10 chr18 24296127 24296224 -62381324 + AluJo SINE Alu 86 182 -130 480 170 245 118 chr18 24296940 24297053 -62380495 - L1ME LINE L1 -342 5820 5723 1709 180 0 29 chr18 24297053 24297364 -62380184 - AluJo SINE Alu -10 302 1 480 170 245 118 chr18 24297364 24297378 -62380170 - L1ME LINE L1 -439 5723 5712 701 156 15 22 chr18 24297378 24297513 -62380035 - L1MB7 LINE L1 0 6184 6051 480 170 245 118 chr18 24297513 24297700 -62379848 - L1ME LINE L1 -450 5712 5451 439 304 65 25 chr18 24297943 24298144 -62379404 - MIR SINE MIR -49 213 5 198 352 80 11 chr18 24299121 24299209 -62378339 - L2 LINE L2 -42 3230 3137 2038 103 3 17 chr18 24299888 24300189 -62377359 + AluSx SINE Alu 1 297 -15 252 0 0 0 chr18 24302172 24302200 -62375348 + (TG)n Simple_repeat Simple_repeat 2 29 0 2381 64 0 7 chr18 24302361 24302659 -62374889 + AluY SINE Alu 1 296 -15 216 207 219 24 chr18 24303609 24303691 -62373857 - MIR SINE MIR -41 221 124 1746 118 21 49 chr18 24304073 24304360 -62373188 - AluJo SINE Alu -33 279 1 242 279 0 87 chr18 24304710 24304773 -62372775 - MIR3 SINE MIR -37 171 119 1959 189 19 3 chr18 24304773 24305132 -62372416 - MLT1A1 LTR MaLR 0 365 1 242 279 0 87 chr18 24305132 24305172 -62372376 - MIR3 SINE MIR -89 119 77 1031 176 29 0 chr18 24305313 24305518 -62372030 + AluJo SINE Alu 88 298 -14 350 174 119 37 chr18 24305592 24305701 -62371847 - MER96 DNA MER1_type? -7 168 51 3041 231 38 31 chr18 24307236 24308073 -62369475 - L1ME1 LINE L1 -9 6157 5315 2005 137 3 0 chr18 24308098 24308391 -62369157 - AluSx SINE Alu -18 294 1 23 0 0 29 chr18 24308402 24308418 -62369130 + AT_rich Low_complexity Low_complexity 1 16 -17 1979 106 62 0 chr18 24308418 24308710 -62368838 - AluSp SINE Alu -3 310 1 23 0 0 29 chr18 24308710 24308727 -62368821 + AT_rich Low_complexity Low_complexity 16 33 0 4049 113 8 13 chr18 24308733 24309067 -62368481 - L1PA15 LINE L1 -4 6161 5830 2024 95 60 0 chr18 24309067 24309351 -62368197 - AluSp SINE Alu -12 301 1 4049 113 8 13 chr18 24309351 24309611 -62367937 - L1PA15 LINE L1 -335 5830 5570 706 154 22 7 chr18 24309617 24309753 -62367795 - L1ME1 LINE L1 -821 5325 5188 2195 78 26 16 chr18 24309759 24310067 -62367481 - AluY SINE Alu 0 311 1 221 304 175 34 chr18 24310113 24310620 -62366928 + L2 LINE L2 2656 3242 -30 1352 151 71 8 chr18 24310997 24311249 -62366299 - AluJb SINE Alu -44 268 1 207 186 0 0 chr18 24312865 24312908 -62364640 + (TG)n Simple_repeat Simple_repeat 1 43 0 2018 152 65 8 chr18 24313079 24313448 -62364100 + MLT1B LTR MaLR 1 390 0 329 73 0 91 chr18 24315004 24315059 -62362489 + MER53 DNA DNA 137 186 -3 434 278 72 116 chr18 24315155 24315665 -62361883 - MLT1K LTR MaLR -61 527 40 206 88 59 0 chr18 24315808 24315842 -62361706 + CT-rich Low_complexity Low_complexity 4 39 0 237 270 100 0 chr18 24316394 24316494 -62361054 - AluJo SINE Alu -108 194 85 309 318 120 30 chr18 24316574 24316807 -62360741 + MIR SINE MIR 8 261 -1 398 329 60 40 chr18 24317493 24317745 -62359803 - L2 LINE L2 -527 2787 2531 965 121 24 12 chr18 24318004 24318170 -62359378 + AluSx SINE Alu 19 186 -126 1712 76 8 42 chr18 24318316 24318580 -62358968 + AluSp SINE Alu 46 300 -13 342 138 0 0 chr18 24319416 24319474 -62358074 + (TCCC)n Simple_repeat Simple_repeat 3 60 0 1761 143 10 3 chr18 24319474 24319767 -62357781 - AluJb SINE Alu -17 295 1 2722 13 0 3 chr18 24320296 24320608 -62356940 - AluYa5 SINE Alu 0 311 1 728 170 134 29 chr18 24321314 24321485 -62356063 - MER53 DNA DNA 0 189 1 1765 231 220 23 chr18 24321946 24322505 -62355043 + MER115 DNA AcHobo 1 669 -24 789 156 8 0 chr18 24322623 24322745 -62354803 + FRAM SINE Alu 38 160 -16 286 257 133 44 chr18 24322809 24322922 -62354626 - L2 LINE L2 0 3272 3150 346 174 312 58 chr18 24323890 24324028 -62353520 - MER5B DNA MER1_type -2 176 4 2336 87 3 0 chr18 24325574 24325884 -62351664 - AluY SINE Alu 0 311 1 444 278 54 0 chr18 24326209 24326331 -62351217 + MIR3 SINE MIR 56 188 -20 21 0 0 0 chr18 24327136 24327157 -62350391 + GC_rich Low_complexity Low_complexity 1 21 0 214 241 69 0 chr18 24327560 24327647 -62349901 + (GAGTG)n Simple_repeat Simple_repeat 3 95 0 211 242 20 30 chr18 24327615 24327714 -62349834 + GA-rich Low_complexity Low_complexity 4 101 0 * 2044 98 3 41 chr18 24328691 24329006 -62348542 - AluSx SINE Alu -9 303 1 396 274 18 126 chr18 24329073 24329296 -62348252 - MIR3 SINE MIR -6 202 4 2111 103 0 0 chr18 24329324 24329647 -62347901 - AluSx SINE Alu 0 323 1 1068 65 0 0 chr18 24329954 24330092 -62347456 + L1MB7 LINE L1 6030 6167 -17 2223 109 0 6 chr18 24330832 24331144 -62346404 - AluSx SINE Alu -2 310 1 3007 191 88 9 chr18 24331193 24331880 -62345668 - L1ME2 LINE L1 -2 6162 5424 2343 78 0 0 chr18 24332563 24332859 -62344689 - AluSg1 SINE Alu -13 296 1 575 309 79 12 chr18 24334863 24335109 -62342439 + MIR SINE MIR 4 262 0 203 248 179 28 chr18 24336075 24336220 -62341328 + MIR SINE MIR 41 207 -55 2251 54 3 63 chr18 24337427 24337743 -62339805 - AluY SINE Alu -14 297 1 192 243 49 132 chr18 24337954 24338098 -62339450 + MIR3 SINE MIR 37 168 -40 182 314 50 41 chr18 24338073 24338194 -62339354 - MIR SINE MIR -95 167 46 * 438 20 0 0 chr18 24338835 24338886 -62338662 + (CA)n Simple_repeat Simple_repeat 1 51 0 25 51 0 0 chr18 24340365 24340404 -62337144 + AT_rich Low_complexity Low_complexity 1 39 0 2113 141 0 0 chr18 24340526 24340838 -62336710 - AluSx SINE Alu 0 312 1 542 313 75 19 chr18 24340906 24341174 -62336374 + L1M4b LINE L1 8 290 -6569 308 286 71 32 chr18 24341505 24341659 -62335889 + L1M4b LINE L1 1029 1188 -5667 2071 238 72 71 chr18 24341716 24342306 -62335242 + L1M4b LINE L1 1205 1792 -5167 2095 96 3 7 chr18 24342306 24342612 -62334936 - AluSc SINE Alu 0 305 1 2071 238 72 71 chr18 24342612 24343100 -62334448 + L1M4b LINE L1 1792 2278 -4681 9145 195 78 89 chr18 24343104 24344238 -62333310 + L1M4b LINE L1 2940 4085 -2872 1700 166 21 21 chr18 24344238 24344521 -62333027 + AluJb SINE Alu 1 283 -29 9145 195 78 89 chr18 24344521 24345545 -62332003 + L1M4b LINE L1 4085 5119 -1838 1688 162 56 7 chr18 24345545 24345829 -62331719 + AluJo SINE Alu 1 298 -14 9145 195 78 89 chr18 24345829 24345849 -62331699 + L1M4b LINE L1 5119 5138 -1819 826 158 24 0 chr18 24345849 24345976 -62331572 - FLAM_C SINE Alu -13 130 1 9145 195 78 89 chr18 24345976 24346453 -62331095 + L1M4b LINE L1 5138 5619 -1338 2518 81 0 0 chr18 24346453 24346761 -62330787 - AluSg SINE Alu -2 308 1 9145 195 78 89 chr18 24346761 24347063 -62330485 + L1M4b LINE L1 5619 5992 -965 2435 90 3 0 chr18 24347063 24347373 -62330175 + AluY SINE Alu 1 311 0 9145 195 78 89 chr18 24347373 24347472 -62330076 + L1M4b LINE L1 5992 6091 -866 424 289 14 31 chr18 24347608 24347843 -62329705 + GA-rich Low_complexity Low_complexity 1 231 0 228 248 19 38 chr18 24348118 24348223 -62329325 + GA-rich Low_complexity Low_complexity 2 104 0 243 122 0 0 chr18 24348275 24348324 -62329224 + (TAAAAA)n Simple_repeat Simple_repeat 3 51 0 637 229 37 11 chr18 24348339 24348527 -62329021 + L1MC4 LINE L1 7710 7902 -140 488 267 7 0 chr18 24348591 24348744 -62328804 + L1MC4 LINE L1 7882 7995 0 293 226 92 40 chr18 24348745 24348919 -62328629 + L1MC5 LINE L1 7708 7911 -50 237 234 68 68 chr18 24350319 24350444 -62327104 - MIR SINE MIR -73 135 17 210 71 0 0 chr18 24351183 24351211 -62326337 + (TCTA)n Simple_repeat Simple_repeat 1 28 0 1448 158 32 70 chr18 24351211 24351496 -62326052 - AluJo SINE Alu -38 274 1 2256 117 0 0 chr18 24352282 24352582 -62324966 - AluSx SINE Alu -11 301 2 1942 122 0 4 chr18 24352973 24353244 -62324304 + AluSx SINE Alu 1 270 -42 187 268 110 47 chr18 24353357 24353484 -62324064 - MIR SINE MIR -36 226 92 311 323 107 42 chr18 24353541 24353851 -62323697 + L2 LINE L2 2942 3271 -1 300 91 0 0 chr18 24353944 24353988 -62323560 + (TG)n Simple_repeat Simple_repeat 1 44 0 826 167 27 13 chr18 24354519 24354669 -62322879 - FRAM SINE Alu -24 152 1 240 35 0 0 chr18 24354736 24354765 -62322783 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2356 97 0 7 chr18 24355122 24355431 -62322117 + AluSg SINE Alu 1 307 -3 476 237 51 51 chr18 24355664 24355841 -62321707 - MER104 DNA MER2_type -3 177 1 193 336 36 9 chr18 24356952 24357062 -62320486 - L2 LINE L2 -1636 1678 1566 757 211 7 21 chr18 24357174 24357316 -62320232 + AluJo SINE Alu 5 144 -168 2259 120 0 0 chr18 24357591 24357892 -62319656 + AluSx SINE Alu 1 301 -11 1589 189 32 0 chr18 24358776 24359056 -62318492 + AluJo SINE Alu 1 289 -23 1653 158 17 24 chr18 24359271 24359563 -62317985 + AluJb SINE Alu 1 290 -22 239 179 89 0 chr18 24359568 24359624 -62317924 - L1MC4 LINE L1 -23 8019 7959 2354 84 3 0 chr18 24359640 24359925 -62317623 - AluSp SINE Alu -26 287 2 214 211 0 0 chr18 24359973 24360011 -62317537 + (TA)n Simple_repeat Simple_repeat 1 38 0 1019 218 26 72 chr18 24360012 24360319 -62317229 - L1MC4 LINE L1 -125 7917 7625 2195 106 7 0 chr18 24360357 24360677 -62316871 + AluSx SINE Alu 1 322 0 2207 174 9 20 chr18 24361312 24361750 -62315798 - L1MB4 LINE L1 0 6180 5748 1970 158 0 0 chr18 24361770 24362067 -62315481 - AluJo SINE Alu -15 297 1 2048 122 0 11 chr18 24362823 24363101 -62314447 - AluSq SINE Alu -38 275 1 28 0 0 0 chr18 24363879 24363907 -62313641 + AT_rich Low_complexity Low_complexity 1 28 0 1761 178 11 0 chr18 24363907 24364194 -62313354 - AluJo SINE Alu -22 290 1 657 229 15 0 chr18 24364199 24364330 -62313218 - FLAM_A SINE Alu 0 133 1 2207 115 0 0 chr18 24364340 24364636 -62312912 - AluSx SINE Alu -16 296 1 444 105 0 0 chr18 24364664 24364740 -62312808 + (TTCC)n Simple_repeat Simple_repeat 3 78 0 2305 101 3 0 chr18 24364744 24365052 -62312496 - AluSg SINE Alu -1 309 1 2147 106 0 64 chr18 24365055 24365384 -62312164 - AluSx SINE Alu -4 308 1 977 121 0 14 chr18 24365858 24365998 -62311550 + FLAM_C SINE Alu 1 138 -5 855 267 11 0 chr18 24366140 24366331 -62311217 - MER58A DNA MER1_type -29 195 3 2232 119 10 0 chr18 24366686 24366989 -62310559 - AluSx SINE Alu -6 306 1 912 121 11 11 chr18 24367473 24367647 -62309901 + (TTTC)n Simple_repeat Simple_repeat 4 177 0 873 79 11 39 chr18 24367632 24367810 -62309738 + (TTCCC)n Simple_repeat Simple_repeat 5 177 0 * 326 225 22 0 chr18 24367808 24367897 -62309651 + CT-rich Low_complexity Low_complexity 3 93 0 * 2045 123 27 0 chr18 24368211 24368504 -62309044 - AluSq SINE Alu -12 301 1 2445 58 10 3 chr18 24368535 24368828 -62308720 - AluY SINE Alu -16 295 1 296 298 56 37 chr18 24368830 24368913 -62308635 + L1ME4a LINE L1 5602 5682 -2126 1611 210 62 0 chr18 24368913 24369162 -62308386 + MER2 DNA MER2_type 1 276 -68 2079 114 3 20 chr18 24369162 24369468 -62308080 - AluSx SINE Alu -11 301 1 1611 210 62 0 chr18 24369468 24369542 -62308006 + MER2 DNA MER2_type 276 344 0 296 298 56 37 chr18 24369542 24369619 -62307929 + L1ME4a LINE L1 5682 5765 -2043 320 229 71 59 chr18 24369726 24369867 -62307681 + L1ME4a LINE L1 5950 6095 -26 2391 105 0 0 chr18 24369867 24370173 -62307375 - AluSq SINE Alu -6 307 2 320 229 71 59 chr18 24370173 24370201 -62307347 + L1ME4a LINE L1 6095 6121 0 1031 261 79 25 chr18 24370641 24370846 -62306702 - L2 LINE L2 -6 3307 3115 234 0 0 0 chr18 24370846 24370872 -62306676 + (TG)n Simple_repeat Simple_repeat 2 27 0 1031 261 79 25 chr18 24370872 24371069 -62306479 - L2 LINE L2 -198 3115 2883 532 271 68 64 chr18 24371131 24371426 -62306122 - L1ME LINE L1 -469 5652 5357 269 252 99 69 chr18 24371717 24371848 -62305700 - MIR SINE MIR -9 253 119 829 229 58 85 chr18 24371894 24371911 -62305637 - MER93a LTR ERV1 -2 400 384 1751 175 3 16 chr18 24371911 24372220 -62305328 + AluJb SINE Alu 1 305 -7 829 229 58 85 chr18 24372220 24372613 -62304935 - MER93a LTR ERV1 -18 384 1 220 287 103 0 chr18 24373372 24373459 -62304089 + L2 LINE L2 3217 3312 -1 1896 165 8 52 chr18 24373463 24373531 -62304017 - MLT1A1 LTR MaLR 0 365 296 2215 125 0 6 chr18 24373531 24373843 -62303705 + AluSx SINE Alu 1 310 -2 1896 165 8 52 chr18 24373843 24373999 -62303549 - MLT1A1 LTR MaLR -69 296 135 2215 86 0 55 chr18 24373999 24374326 -62303222 - AluSc SINE Alu 0 309 1 2295 69 0 53 chr18 24374326 24374630 -62302918 - AluSc SINE Alu -21 288 1 1896 165 8 52 chr18 24374630 24374785 -62302763 - MLT1A1 LTR MaLR -228 137 1 1804 123 0 0 chr18 24374895 24375138 -62302410 - AluSc SINE Alu -19 290 48 372 289 50 8 chr18 24375244 24375365 -62302183 + L2 LINE L2 2285 2410 -904 236 341 0 12 chr18 24375368 24375450 -62302098 + L2 LINE L2 2647 2727 -587 193 298 126 40 chr18 24375469 24375667 -62301881 + L2 LINE L2 2859 3073 -199 2215 123 0 3 chr18 24375898 24376198 -62301350 - AluSg SINE Alu -11 299 1 1672 190 7 17 chr18 24376200 24376500 -62301048 - AluJo SINE Alu -15 297 1 240 302 0 0 chr18 24377670 24377723 -62299825 + L2 LINE L2 3122 3174 -98 702 232 19 48 chr18 24377739 24377946 -62299602 + MIR SINE MIR 18 218 -44 187 286 0 0 chr18 24377990 24378032 -62299516 + L2 LINE L2 3215 3256 -16 2163 122 0 10 chr18 24378377 24378680 -62298868 - AluSx SINE Alu -12 300 1 1607 167 3 60 chr18 24380943 24381260 -62296288 - AluJo SINE Alu -12 300 2 915 245 68 75 chr18 24381372 24381797 -62295751 - MLT1K LTR MaLR -12 576 155 188 296 28 0 chr18 24382047 24382118 -62295430 + MER5C DNA MER1_type 1 73 -251 748 138 8 8 chr18 24382275 24382398 -62295150 - FLAM_A SINE Alu -10 123 1 2388 79 3 38 chr18 24384027 24384342 -62293206 - AluSp SINE Alu -9 304 1 4932 175 22 22 chr18 24384373 24385113 -62292435 + L1MB3 LINE L1 5051 5793 -390 2198 129 0 3 chr18 24385113 24385415 -62292133 + AluSx SINE Alu 1 301 -11 4932 175 22 22 chr18 24385415 24385807 -62291741 + L1MB3 LINE L1 5793 6183 0 2239 109 0 3 chr18 24385817 24386121 -62291427 + AluSg SINE Alu 1 303 -7 2301 122 3 0 chr18 24386798 24387109 -62290439 + AluSx SINE Alu 1 312 0 1711 153 4 0 chr18 24387253 24387502 -62290046 + AluJo SINE Alu 6 255 -57 2143 121 23 0 chr18 24387764 24388091 -62289457 - AluSx SINE Alu 0 334 1 513 221 96 0 chr18 24388857 24388993 -62288555 + MIR SINE MIR 114 262 0 2032 129 25 3 chr18 24389195 24389481 -62288067 + AluSx SINE Alu 1 292 -20 2112 131 141 24 chr18 24389703 24389746 -62287802 - MSTA LTR MaLR 0 428 391 2276 112 3 0 chr18 24389746 24390050 -62287498 + AluSx SINE Alu 1 305 -7 2112 131 141 24 chr18 24390050 24390389 -62287159 - MSTA LTR MaLR -37 391 1 475 319 24 24 chr18 24390529 24390736 -62286812 + MIR SINE MIR 28 234 -28 221 273 11 11 chr18 24391141 24391229 -62286319 + A-rich Low_complexity Low_complexity 5 92 0 198 279 225 0 chr18 24391656 24391767 -62285781 - MIR SINE MIR -108 154 19 2194 109 3 7 chr18 24391824 24392126 -62285422 + AluSx SINE Alu 1 301 -11 195 139 0 0 chr18 24392276 24392312 -62285236 + (T)n Simple_repeat Simple_repeat 1 36 0 1738 195 129 18 chr18 24392438 24392879 -62284669 - MLT1D LTR MaLR 0 505 16 2388 82 26 7 chr18 24392880 24393185 -62284363 - AluY SINE Alu 0 311 1 625 181 146 21 chr18 24394815 24394959 -62282589 - FRAM SINE Alu -4 162 1 398 223 19 48 chr18 24395190 24395293 -62282255 + L2 LINE L2 3183 3282 -31 290 180 82 0 chr18 24395312 24395373 -62282175 - L2 LINE L2 -56 3257 3192 444 344 93 27 chr18 24395395 24395997 -62281551 + L2 LINE L2 2402 3079 -193 286 111 0 0 chr18 24396194 24396239 -62281309 + Alu SINE Alu 256 300 -1 23 0 0 0 chr18 24396673 24396696 -62280852 + AT_rich Low_complexity Low_complexity 1 23 0 219 69 0 0 chr18 24397349 24397378 -62280170 + (CAG)n Simple_repeat Simple_repeat 3 31 0 214 191 0 0 chr18 24397479 24397521 -62280027 + T-rich Low_complexity Low_complexity 1 42 0 2135 127 41 36 chr18 24398410 24398772 -62278776 + THE1B LTR MaLR 1 364 0 2422 71 0 13 chr18 24398998 24399308 -62278240 + AluY SINE Alu 1 306 -5 809 266 45 12 chr18 24399517 24399761 -62277787 - L1MC4a LINE L1 -1957 5851 5600 1090 98 0 0 chr18 24400076 24400209 -62277339 + AluSq/x SINE Alu 1 133 -180 2074 136 0 10 chr18 24400212 24400522 -62277026 + AluSx SINE Alu 1 307 -5 190 266 16 16 chr18 24400593 24400657 -62276891 + L2 LINE L2 3205 3268 -4 1909 175 3 0 chr18 24401078 24401381 -62276167 - AluJb SINE Alu -8 304 1 551 282 106 72 chr18 24401619 24401781 -62275767 - MLT1K LTR MaLR -3 585 430 664 194 57 0 chr18 24401781 24401905 -62275643 - MER94 DNA DNA 0 134 4 551 282 106 72 chr18 24401905 24402118 -62275430 - MLT1K LTR MaLR -158 430 197 1705 75 0 19 chr18 24402845 24403087 -62274461 - AluSc SINE Alu 0 309 72 2470 49 0 26 chr18 24403088 24403394 -62274154 - AluY SINE Alu -13 298 1 23 0 0 0 chr18 24403505 24403528 -62274020 + AT_rich Low_complexity Low_complexity 1 23 0 4342 204 38 52 chr18 24403622 24403889 -62273659 + L1M4 LINE L1 3705 3974 -2172 2387 67 0 26 chr18 24403889 24404202 -62273346 + AluY SINE Alu 1 305 -6 4342 204 38 52 chr18 24404202 24405168 -62272380 + L1M4 LINE L1 3974 4921 -1225 1928 146 17 20 chr18 24405168 24405469 -62272079 + AluJb SINE Alu 1 300 -12 298 200 30 70 chr18 24405503 24405603 -62271945 + MER20B DNA MER1_type 688 783 0 2493 61 0 22 chr18 24406164 24406476 -62271072 + AluY SINE Alu 1 305 -6 194 278 77 47 chr18 24407027 24407196 -62270352 + L2 LINE L2 555 728 -2586 3330 151 58 29 chr18 24407326 24407668 -62269880 - L1MB5 LINE L1 0 6174 5843 2059 182 5 20 chr18 24407668 24408063 -62269485 - MLT1B LTR MaLR 0 390 2 3330 151 58 29 chr18 24408063 24408378 -62269170 - L1MB5 LINE L1 -331 5843 5498 2369 104 0 0 chr18 24408503 24408812 -62268736 + AluSx SINE Alu 1 309 -3 221 265 184 59 chr18 24408863 24408926 -62268622 + MIR SINE MIR 109 163 -99 1718 166 48 0 chr18 24408926 24409216 -62268332 + AluJo SINE Alu 1 304 -8 221 265 184 59 chr18 24409216 24409288 -62268260 + MIR SINE MIR 163 261 -1 468 195 211 0 chr18 24409374 24409502 -62268046 - L2 LINE L2 -1 3312 3158 2124 95 3 50 chr18 24409859 24410176 -62267372 + AluSx SINE Alu 1 302 -10 1387 77 0 17 chr18 24410189 24410370 -62267178 + AluSg/x SINE Alu 132 309 -3 252 345 9 35 chr18 24410484 24410600 -62266948 + L2 LINE L2 2945 3057 -215 2226 91 3 10 chr18 24410621 24410965 -62266583 + AluSg SINE Alu 1 310 0 2361 106 0 0 chr18 24411148 24411451 -62266097 - AluSx SINE Alu -9 303 1 660 218 62 33 chr18 24411910 24412121 -62265427 + MIR SINE MIR 42 258 -4 312 63 0 63 chr18 24414416 24414479 -62263069 + (TTCC)n Simple_repeat Simple_repeat 3 61 0 1950 139 7 10 chr18 24414487 24414796 -62262752 - AluSx SINE Alu 0 312 5 2215 60 4 0 chr18 24414808 24415076 -62262472 - AluY SINE Alu 0 311 43 1555 134 42 80 chr18 24415076 24415236 -62262312 - AluJb SINE Alu -16 296 150 2364 87 0 0 chr18 24415236 24415523 -62262025 - AluSc SINE Alu -22 287 1 1555 134 42 80 chr18 24415523 24415668 -62261880 - AluJb SINE Alu -162 150 1 579 173 100 59 chr18 24415669 24415799 -62261749 - Charlie1 DNA MER1_type -27 2734 2590 672 97 0 11 chr18 24415799 24415892 -62261656 + HY4 scRNA scRNA 2 93 0 579 173 100 59 chr18 24415892 24415981 -62261567 - Charlie1 DNA MER1_type -171 2590 2506 612 224 9 0 chr18 24416003 24416119 -62261429 - FLAM_C SINE Alu -25 118 2 664 149 161 12 chr18 24416121 24416282 -62261266 - Charlie1 DNA MER1_type -208 2553 2369 1701 152 53 3 chr18 24416289 24416591 -62260957 - Charlie1 DNA MER1_type -2409 352 36 1878 120 36 45 chr18 24416754 24417113 -62260435 + L1MC3 LINE L1 7430 7785 0 1870 145 7 39 chr18 24417322 24417632 -62259916 - AluSx SINE Alu -12 300 1 2055 103 6 72 chr18 24419102 24419421 -62258127 - AluSx SINE Alu -14 298 1 952 161 125 26 chr18 24419540 24419732 -62257816 - AluJo SINE Alu -17 295 85 257 308 118 30 chr18 24419806 24420043 -62257505 + MIR SINE MIR 4 261 -1 322 363 58 17 chr18 24420741 24420981 -62256567 - L2 LINE L2 -534 2780 2531 1305 145 0 0 chr18 24421235 24421414 -62256134 + AluSx SINE Alu 1 179 -133 1996 107 4 4 chr18 24421707 24421979 -62255569 - AluSx SINE Alu -40 272 1 245 340 42 28 chr18 24422714 24422858 -62254690 + MIR3 SINE MIR 17 162 -46 2377 99 3 0 chr18 24422944 24423247 -62254301 - AluSp SINE Alu -9 304 1 2363 102 3 0 chr18 24424628 24424931 -62252617 + AluSp SINE Alu 1 304 -9 952 162 103 0 chr18 24425069 24425254 -62252294 + MER3 DNA MER1_type 6 209 0 258 222 0 0 chr18 24425211 24425265 -62252283 - MER3 DNA MER1_type -119 90 37 * 180 0 0 0 chr18 24425602 24425622 -62251926 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 1605 183 27 17 chr18 24425951 24426251 -62251297 + AluJb SINE Alu 3 305 -7 1611 144 39 78 chr18 24426259 24426565 -62250983 + AluJo SINE Alu 1 294 -18 2370 82 7 0 chr18 24426572 24426864 -62250684 + AluSq SINE Alu 1 294 -19 356 212 136 8 chr18 24427181 24427299 -62250249 - L1ME4a LINE L1 -28 6093 5961 2192 105 0 3 chr18 24427303 24427614 -62249934 - AluSq SINE Alu 0 312 3 318 243 39 55 chr18 24427630 24427811 -62249737 - L1ME4a LINE L1 -2313 5495 5318 2367 113 0 0 chr18 24427832 24428141 -62249407 - AluSq SINE Alu -4 309 1 1605 222 114 37 chr18 24428286 24428804 -62248744 - MLT1E LTR MaLR -2 591 34 191 125 25 0 chr18 24428834 24428874 -62248674 + CT-rich Low_complexity Low_complexity 2 42 0 1011 173 13 89 chr18 24429268 24429505 -62248043 - MER20 DNA MER1_type 0 219 1 196 397 51 0 chr18 24429553 24429709 -62247839 - L2 LINE L2 -205 3067 2904 437 351 41 29 chr18 24430193 24430509 -62247039 - L2 LINE L2 -575 2739 2420 800 176 33 0 chr18 24430572 24430725 -62246823 + L1PB4 LINE L1 5997 6154 -2 2252 103 0 7 chr18 24430888 24431190 -62246358 + AluSg SINE Alu 1 300 -10 1752 157 0 11 chr18 24431771 24432039 -62245509 - AluSq SINE Alu -48 265 1 1035 217 97 51 chr18 24432056 24432406 -62245142 - MER47A DNA MER2_type 0 366 1 31 44 0 0 chr18 24432866 24432911 -62244637 + AT_rich Low_complexity Low_complexity 1 45 0 8541 51 0 0 chr18 24432994 24434817 -62242731 + L1PA5 LINE L1 4329 6151 -3 229 261 17 25 chr18 24434820 24434939 -62242609 + L1ME LINE L1 5272 5389 -2653 260 289 21 10 chr18 24435058 24435155 -62242393 + L1ME LINE L1 5534 5631 -490 964 204 0 0 chr18 24435161 24435323 -62242225 - AluJo SINE Alu -17 295 134 5528 130 13 2 chr18 24435323 24435996 -62241552 - L1PA16 LINE L1 0 6166 5479 1902 129 3 60 chr18 24435996 24436313 -62241235 - AluSp SINE Alu -14 299 1 5528 130 13 2 chr18 24436313 24436878 -62240670 - L1PA16 LINE L1 -687 5479 4921 718 203 0 0 chr18 24436879 24437012 -62240536 - AluJo SINE Alu -169 133 1 309 272 98 22 chr18 24437030 24437214 -62240334 + L1ME LINE L1 5639 5836 -285 2333 108 0 0 chr18 24437512 24437817 -62239731 + AluSg SINE Alu 1 305 -5 21 0 0 0 chr18 24438356 24438377 -62239171 + AT_rich Low_complexity Low_complexity 1 21 0 1882 147 13 26 chr18 24439470 24439776 -62237772 + AluJb SINE Alu 1 302 -10 2263 117 0 13 chr18 24439841 24440157 -62237391 + AluSx SINE Alu 1 312 0 236 30 30 0 chr18 24440450 24440483 -62237065 + (CAAA)n Simple_repeat Simple_repeat 4 37 0 2013 140 0 3 chr18 24440661 24440961 -62236587 - AluSx SINE Alu -13 299 1 402 83 42 0 chr18 24441347 24441419 -62236129 + CT-rich Low_complexity Low_complexity 1 75 0 2274 124 0 0 chr18 24441419 24441726 -62235822 - AluSg SINE Alu -1 309 3 2040 70 4 8 chr18 24442063 24442321 -62235227 + AluY SINE Alu 39 295 -16 1322 289 146 27 chr18 24442939 24443893 -62233655 - L2 LINE L2 -2 3311 2202 2474 81 0 0 chr18 24443893 24444190 -62233358 + AluSx SINE Alu 1 297 -15 1322 289 146 27 chr18 24444190 24444324 -62233224 - L2 LINE L2 -1111 2202 2085 189 224 35 0 chr18 24444750 24444808 -62232740 + L2 LINE L2 2891 2950 -322 640 167 30 45 chr18 24446192 24446324 -62231224 + FLAM_A SINE Alu 1 130 -3 418 272 67 46 chr18 24446642 24446837 -62230711 + L2 LINE L2 3072 3270 -2 2032 117 30 13 chr18 24447130 24447430 -62230118 + AluJb SINE Alu 1 305 -7 952 146 0 38 chr18 24447437 24447595 -62229953 + FRAM SINE Alu 13 164 -12 941 108 0 43 chr18 24447890 24448029 -62229519 - FLAM_C SINE Alu 0 133 1 2336 88 3 13 chr18 24448570 24448876 -62228672 + AluY SINE Alu 1 303 -8 2238 106 3 13 chr18 24449425 24449728 -62227820 + AluSx SINE Alu 2 301 -11 2176 123 0 7 chr18 24449731 24450032 -62227516 + AluSx SINE Alu 2 300 -12 1667 154 3 82 chr18 24450229 24450548 -62227000 + AluJo SINE Alu 1 294 -18 468 0 0 0 chr18 24450549 24450601 -62226947 + (TA)n Simple_repeat Simple_repeat 2 53 0 381 114 0 114 chr18 24450977 24451056 -62226492 - AluJ/FLAM SINE Alu -231 71 2 195 42 0 0 chr18 24451126 24451150 -62226398 + (TG)n Simple_repeat Simple_repeat 1 24 0 2344 117 0 0 chr18 24451511 24451819 -62225729 - AluSx SINE Alu -4 308 1 339 25 0 0 chr18 24452494 24452534 -62225014 + (CA)n Simple_repeat Simple_repeat 1 40 0 668 122 53 69 chr18 24452606 24452737 -62224811 + FLAM_C SINE Alu 2 130 -3 2206 90 24 0 chr18 24452747 24453037 -62224511 + AluSx SINE Alu 1 297 -15 2259 120 0 0 chr18 24454170 24454471 -62223077 + AluSx SINE Alu 1 301 -11 1589 189 32 0 chr18 24455352 24455632 -62221916 + AluJo SINE Alu 1 289 -23 2217 103 28 0 chr18 24455844 24456134 -62221414 + AluSx SINE Alu 1 298 -14 1270 167 4 31 chr18 24457143 24457371 -62220177 + MER66-int LTR ERV1 6892 7113 -1007 739 171 29 71 chr18 24457376 24457546 -62220002 + MER4D LTR ERV1 9 171 -701 1041 226 66 60 chr18 24457628 24457692 -62219856 + MER66-int LTR ERV1 6326 6388 -288 2425 100 0 0 chr18 24457692 24458001 -62219547 + AluSc SINE Alu 1 309 0 1041 226 66 60 chr18 24458001 24458285 -62219263 + MER66-int LTR ERV1 6388 6676 0 1570 127 52 49 chr18 24458402 24458669 -62218879 + AluSx SINE Alu 1 268 -44 938 265 26 19 chr18 24458760 24459028 -62218520 + MER41E LTR ERV1 226 495 -17 2221 92 3 0 chr18 24459165 24459546 -62218002 + AluSq SINE Alu 1 382 0 213 39 0 0 chr18 24459859 24459885 -62217663 + (TAAAAA)n Simple_repeat Simple_repeat 3 28 0 2386 82 0 3 chr18 24460403 24460706 -62216842 + AluSg SINE Alu 4 305 -5 478 240 65 26 chr18 24460716 24460870 -62216678 + MLT1J LTR MaLR 13 172 -339 2380 87 3 0 chr18 24461052 24461351 -62216197 + AluSp SINE Alu 1 300 -13 1398 184 21 3 chr18 24461353 24461635 -62215913 - L1MC4 LINE L1 -406 7636 7350 2333 103 0 3 chr18 24462494 24462805 -62214743 - AluSx SINE Alu -2 310 1 228 303 58 84 chr18 24462950 24463105 -62214443 - L2 LINE L2 -21 3251 3101 331 301 26 13 chr18 24463169 24463322 -62214226 - MIR SINE MIR -3 259 105 2864 10 0 3 chr18 24463601 24463910 -62213638 + AluYa5 SINE Alu 1 308 -3 1874 143 10 3 chr18 24464442 24464735 -62212813 + AluJb SINE Alu 1 295 -17 342 138 0 0 chr18 24464735 24464793 -62212755 + (GGGA)n Simple_repeat Simple_repeat 3 60 0 2232 71 7 36 chr18 24465629 24465938 -62211610 - AluSp SINE Alu -13 300 1 742 170 134 29 chr18 24466644 24466815 -62210733 - MER53 DNA DNA 0 189 1 1731 231 220 23 chr18 24467276 24467835 -62209713 + MER115 DNA AcHobo 1 669 -24 786 156 8 0 chr18 24467953 24468075 -62209473 + FRAM SINE Alu 38 160 -16 243 274 147 29 chr18 24468150 24468252 -62209296 - L2 LINE L2 -9 3263 3150 287 167 312 58 chr18 24469219 24469357 -62208191 - MER5B DNA MER1_type -2 176 4 2470 87 3 0 chr18 24470903 24471213 -62206335 - AluY SINE Alu 0 311 1 397 254 83 0 chr18 24471551 24471660 -62205888 + MIR3 SINE MIR 70 188 -20 1771 146 44 0 chr18 24472225 24472500 -62205048 - AluJb SINE Alu -7 305 19 2437 80 0 0 chr18 24472521 24472821 -62204727 - AluSg SINE Alu -4 306 7 1945 164 0 0 chr18 24474049 24474353 -62203195 - AluSg SINE Alu -6 304 1 2392 89 0 0 chr18 24474822 24475125 -62202423 - AluSx SINE Alu -9 303 1 2125 127 30 0 chr18 24475303 24475603 -62201945 - AluSx SINE Alu -3 309 1 2531 82 0 0 chr18 24475694 24476000 -62201548 + AluY SINE Alu 1 306 -5 931 255 88 71 chr18 24476010 24476501 -62201047 + MLT1J LTR MaLR 13 511 0 3737 120 12 68 chr18 24476530 24477452 -62200096 + L1M1 LINE L1 4653 5509 -795 2213 106 3 0 chr18 24477452 24477777 -62199771 - AluSp SINE Alu 0 326 1 3737 120 12 68 chr18 24477777 24477874 -62199674 + L1M1 LINE L1 5509 5610 -694 749 96 10 10 chr18 24477874 24477978 -62199570 + FLAM_C SINE Alu 14 117 -26 21 0 0 0 chr18 24477983 24478004 -62199544 + AT_rich Low_complexity Low_complexity 1 21 0 2159 130 0 22 chr18 24478011 24478326 -62199222 + AluSx SINE Alu 4 311 -1 1198 95 18 0 chr18 24478328 24478496 -62199052 + L1MA2 LINE L1 6134 6304 0 2185 118 0 3 chr18 24478602 24478914 -62198634 + AluSx SINE Alu 1 311 0 921 184 62 63 chr18 24479017 24479263 -62198285 - MSTD LTR MaLR 0 396 162 2283 108 3 10 chr18 24479263 24479577 -62197971 - AluSx SINE Alu 0 312 1 921 184 62 63 chr18 24479577 24479660 -62197888 - MSTD LTR MaLR -234 162 80 574 161 36 63 chr18 24479671 24479826 -62197722 - MLT1A2 LTR MaLR -216 174 4 2230 95 3 3 chr18 24480007 24480313 -62197235 + AluSq SINE Alu 3 308 0 748 190 0 29 chr18 24480382 24480519 -62197029 - FLAM_A SINE Alu 0 133 1 208 143 36 0 chr18 24480636 24480692 -62196856 + (TA)n Simple_repeat Simple_repeat 2 59 0 1093 176 42 70 chr18 24480784 24481068 -62196480 - MLT2D LTR ERVL -138 276 1 240 298 0 61 chr18 24481085 24481199 -62196349 + HAL1b LINE L1 819 925 -423 238 170 96 75 chr18 24481237 24481315 -62196233 + HAL1b LINE L1 789 871 -477 2102 137 7 0 chr18 24481315 24481621 -62195927 - AluSx SINE Alu -4 308 1 238 170 96 75 chr18 24481621 24481636 -62195912 + HAL1b LINE L1 871 884 -464 1369 166 74 36 chr18 24481636 24481996 -62195552 - MSTA LTR MaLR 0 364 2 2428 90 3 0 chr18 24482524 24482836 -62194712 + AluSp SINE Alu 1 313 0 3148 161 32 87 chr18 24483083 24483269 -62194279 - LTR8 LTR ERV1 0 691 496 2186 109 0 3 chr18 24483269 24483562 -62193986 + AluSx SINE Alu 2 293 -19 3148 161 32 87 chr18 24483562 24484103 -62193445 - LTR8 LTR ERV1 -195 496 4 2016 152 65 8 chr18 24484669 24485038 -62192510 - MLT1B LTR MaLR 0 390 1 207 186 0 0 chr18 24485209 24485252 -62192296 + (CA)n Simple_repeat Simple_repeat 1 43 0 638 93 0 56 chr18 24485653 24485760 -62191788 - AluSg/x SINE Alu -5 305 205 2279 88 0 36 chr18 24485798 24486105 -62191443 - AluSq SINE Alu -17 296 1 2125 84 11 31 chr18 24486178 24486465 -62191083 + AluSp SINE Alu 1 281 -32 243 0 0 0 chr18 24486465 24486492 -62191056 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 227 300 0 25 chr18 24487105 24487185 -62190363 + L2 LINE L2 2240 2317 -997 426 148 59 5 chr18 24487247 24487682 -62189866 + L1MB2 LINE L1 5601 6131 -36 2298 98 0 19 chr18 24487682 24487998 -62189550 + AluSq SINE Alu 1 310 -3 1132 144 109 26 chr18 24488030 24488259 -62189289 + AluJb SINE Alu 52 299 -13 702 276 50 85 chr18 24488347 24488879 -62188669 + MER34 LTR ERV1 3 623 -21 38 0 0 0 chr18 24489404 24489442 -62188106 + GC_rich Low_complexity Low_complexity 1 38 0 204 97 0 0 chr18 24489630 24489661 -62187887 + (TCCCG)n Simple_repeat Simple_repeat 2 32 0 379 276 10 0 chr18 24490698 24490796 -62186752 - MER94 DNA DNA -31 103 5 2096 106 0 14 chr18 24490899 24491191 -62186357 - AluSx SINE Alu -24 288 1 2458 84 0 0 chr18 24491714 24492013 -62185535 + AluSx SINE Alu 1 299 -13 813 166 25 18 chr18 24492015 24492178 -62185370 - L1MA10 LINE L1 -2 6332 6169 28 29 0 0 chr18 24492195 24492230 -62185318 + AT_rich Low_complexity Low_complexity 1 35 0 623 169 65 24 chr18 24492230 24492354 -62185194 - FLAM_C SINE Alu -14 129 1 21 0 0 0 chr18 24493079 24493100 -62184448 + AT_rich Low_complexity Low_complexity 1 21 0 708 149 18 0 chr18 24493100 24493214 -62184334 - AluJb SINE Alu -21 291 176 32 0 0 0 chr18 24494985 24495017 -62182531 + AT_rich Low_complexity Low_complexity 1 32 0 25 0 0 0 chr18 24495185 24495210 -62182338 + AT_rich Low_complexity Low_complexity 1 25 0 1378 153 24 39 chr18 24495212 24495368 -62182180 - AluJo SINE Alu -23 289 137 2245 54 14 17 chr18 24495368 24495690 -62181858 - AluSp SINE Alu 0 313 1 1378 153 24 39 chr18 24495690 24495787 -62181761 - AluJo SINE Alu -175 137 40 23 33 0 0 chr18 24495807 24495837 -62181711 + AT_rich Low_complexity Low_complexity 1 30 0 6079 90 16 16 chr18 24495846 24495876 -62181672 + L1PA14 LINE L1 5276 5305 -856 1711 163 7 7 chr18 24495876 24496171 -62181377 + AluJb SINE Alu 5 299 -13 6079 90 16 16 chr18 24496171 24496197 -62181351 + L1PA14 LINE L1 5305 5330 -831 1983 123 3 0 chr18 24496197 24496490 -62181058 + AluSx SINE Alu 1 294 -18 6079 90 16 16 chr18 24496490 24497318 -62180230 + L1PA14 LINE L1 5329 6161 0 389 302 197 8 chr18 24497435 24497846 -62179702 - L1MC4a LINE L1 -1874 5934 5412 2170 118 0 0 chr18 24497846 24498150 -62179398 - AluSx SINE Alu -8 304 1 389 302 197 8 chr18 24498150 24498235 -62179313 - L1MC4a LINE L1 -2396 5412 5344 1506 162 13 55 chr18 24498246 24498555 -62178993 - AluJo SINE Alu -9 303 8 4002 171 74 26 chr18 24498570 24498793 -62178755 - L1MB2 LINE L1 0 6171 5960 2230 100 0 0 chr18 24498793 24499084 -62178464 - AluSx SINE Alu -21 291 1 4002 171 74 26 chr18 24499084 24499536 -62178012 - L1MB2 LINE L1 -211 5960 5435 189 0 0 0 chr18 24499536 24499557 -62177991 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 4002 171 74 26 chr18 24499557 24499839 -62177709 - L1MB2 LINE L1 -736 5435 5168 2038 77 3 124 chr18 24500064 24500402 -62177146 + AluSq SINE Alu 1 297 -6 315 286 65 45 chr18 24501115 24501269 -62176279 + MIR SINE MIR 93 249 -13 1814 118 0 15 chr18 24501375 24501638 -62175910 - AluSx SINE Alu -28 284 26 2127 130 0 0 chr18 24502548 24502856 -62174692 - AluSx SINE Alu -4 308 1 2310 84 0 7 chr18 24502967 24503277 -62174271 - AluSc SINE Alu 0 309 2 1770 154 13 10 chr18 24503549 24503848 -62173700 - AluJb SINE Alu -12 300 1 1641 170 0 13 chr18 24504038 24504344 -62173204 + AluJo SINE Alu 1 302 -10 376 300 135 15 chr18 24504450 24504650 -62172898 - L1ME4a LINE L1 -133 5988 5765 1974 135 0 0 chr18 24505066 24505363 -62172185 + AluJb SINE Alu 1 297 -15 800 220 13 0 chr18 24506294 24506453 -62171095 - FRAM SINE Alu -5 161 1 1319 163 45 86 chr18 24506464 24506639 -62170909 - AluSx SINE Alu -2 300 142 1586 87 0 10 chr18 24506639 24506847 -62170701 - AluSx SINE Alu -106 206 1 1319 163 45 86 chr18 24506847 24506984 -62170564 - AluSx SINE Alu -160 142 1 899 128 6 51 chr18 24507543 24507699 -62169849 - MLT1B LTR MaLR -56 334 186 1597 76 44 22 chr18 24508202 24508427 -62169121 - MER30 DNA MER1_type 0 230 1 308 192 19 0 chr18 24508813 24508865 -62168683 - MER5B DNA MER1_type 0 178 126 1402 160 33 69 chr18 24509259 24509565 -62167983 + AluJo SINE Alu 1 295 -17 2455 59 10 0 chr18 24510772 24511076 -62166472 - AluSp SINE Alu -6 307 1 1119 120 0 120 chr18 24511089 24511270 -62166278 - AluJo SINE Alu -23 289 139 2195 85 0 0 chr18 24511270 24511553 -62165995 - AluSc SINE Alu -26 283 1 1119 120 0 120 chr18 24511553 24511596 -62165952 - AluJo SINE Alu -173 139 92 293 104 42 0 chr18 24511706 24511754 -62165794 + MER105 DNA DNA 26 75 -129 352 234 12 114 chr18 24511787 24511954 -62165594 + MER105 DNA DNA 52 201 -3 1531 160 7 52 chr18 24512932 24513238 -62164310 + AluJb SINE Alu 1 292 -20 733 161 23 8 chr18 24513280 24513410 -62164138 - FLAM_C SINE Alu -10 133 2 390 237 11 11 chr18 24514601 24514694 -62162854 + MER5A DNA MER1_type 9 101 -88 1131 82 0 0 chr18 24514716 24514862 -62162686 - AluSp SINE Alu -18 295 150 2100 101 14 0 chr18 24516834 24517120 -62160428 - AluSg SINE Alu -20 290 1 562 152 172 0 chr18 24518169 24518268 -62159280 + FLAM_C SINE Alu 2 117 -26 992 197 74 29 chr18 24518277 24518521 -62159027 - AluJb SINE Alu -25 287 33 1427 109 14 9 chr18 24519427 24519638 -62157910 - AluSx SINE Alu -100 212 1 2111 97 0 26 chr18 24522900 24523209 -62154339 - AluSx SINE Alu -11 301 1 408 266 85 14 chr18 24523319 24523541 -62154007 + MIR SINE MIR 21 259 -3 601 257 20 7 chr18 24526501 24526653 -62150895 + MIR SINE MIR 3 156 -106 289 68 23 0 chr18 24526654 24526698 -62150850 + L1MD3 LINE L1 7938 7982 -13 609 231 164 128 chr18 24527726 24528233 -62149315 + Charlie8 DNA MER1_type 9 533 -1884 2326 96 0 3 chr18 24528879 24529192 -62148356 + AluSx SINE Alu 1 312 0 23 0 0 0 chr18 24529404 24529427 -62148121 + AT_rich Low_complexity Low_complexity 1 23 0 2068 113 0 3 chr18 24531079 24531381 -62146167 - AluSx SINE Alu -11 301 1 1430 192 23 10 chr18 24531423 24531725 -62145823 - AluJo SINE Alu -6 306 1 2268 107 0 0 chr18 24531804 24532114 -62145434 + AluSx SINE Alu 1 310 -2 3362 175 55 12 chr18 24532134 24532809 -62144739 + L1MB7 LINE L1 5423 6126 -58 679 188 47 8 chr18 24532828 24532956 -62144592 - FLAM_C SINE Alu 0 133 1 300 238 0 0 chr18 24532956 24533019 -62144529 + L1MB8 LINE L1 6110 6172 -6 1690 172 10 3 chr18 24533297 24533605 -62143943 + AluJb SINE Alu 1 310 -2 467 301 238 4 chr18 24534346 24534615 -62142933 - L1MC4a LINE L1 -1836 5972 5641 1619 173 7 0 chr18 24534651 24534929 -62142619 - AluJb SINE Alu -32 280 1 228 308 44 0 chr18 24534929 24535020 -62142528 - L1MC4a LINE L1 -469 5652 5558 824 176 0 0 chr18 24535026 24535162 -62142386 - AluJb SINE Alu -1 311 176 1931 146 0 3 chr18 24535196 24535497 -62142051 + AluSx SINE Alu 1 300 -12 1444 106 5 18 chr18 24535583 24535800 -62141748 - AluSg/x SINE Alu -13 297 84 1802 120 18 0 chr18 24535862 24536136 -62141412 - AluJb SINE Alu -17 295 17 272 318 47 30 chr18 24536193 24536317 -62141231 - L1MC4a LINE L1 -996 5150 5019 2279 80 0 17 chr18 24536317 24536619 -62140929 - AluY SINE Alu -14 297 1 272 318 47 30 chr18 24536619 24536730 -62140818 - L1MC4a LINE L1 -1127 5019 4911 693 180 33 0 chr18 24538013 24538135 -62139413 + FLAM_A SINE Alu 1 126 -7 276 326 74 47 chr18 24538261 24538451 -62139097 - L2 LINE L2 -520 2794 2600 321 256 256 24 chr18 24539906 24540156 -62137392 + L2 LINE L2 2899 3206 -107 2224 98 0 0 chr18 24540157 24540454 -62137094 + AluSx SINE Alu 1 297 -15 250 330 23 0 chr18 24542769 24542857 -62134691 + L2 LINE L2 3139 3228 -44 1881 75 56 11 chr18 24543305 24543595 -62133953 + AluSc SINE Alu 1 302 0 4181 187 108 39 chr18 24543610 24544551 -62132997 + L1MC4a LINE L1 6662 7880 -104 4689 39 0 4 chr18 24544551 24545112 -62132436 - L1PA4 LINE L1 0 6155 5597 4181 187 108 39 chr18 24545112 24545225 -62132323 + L1MC4a LINE L1 7880 7984 0 647 176 15 37 chr18 24545332 24545468 -62132080 - FLAM_C SINE Alu 0 133 1 2123 121 0 26 chr18 24545499 24545805 -62131743 + AluSq SINE Alu 1 298 -15 1505 186 52 4 chr18 24546863 24547132 -62130416 - AluJo SINE Alu -30 282 1 2414 84 0 0 chr18 24547839 24548148 -62129400 + AluY SINE Alu 1 309 -2 312 299 130 5 chr18 24548351 24548535 -62129013 - L1MEc LINE L1 -4750 1560 1354 814 172 0 61 chr18 24548535 24548698 -62128850 + AluJo SINE Alu 1 153 -159 4128 187 63 28 chr18 24548711 24549275 -62128273 - L1MB8 LINE L1 -21 6157 5614 1611 175 34 4 chr18 24549275 24549543 -62128005 - AluJb SINE Alu -36 276 1 4128 187 63 28 chr18 24549543 24549818 -62127730 - L1MB8 LINE L1 -564 5614 5350 2324 93 17 0 chr18 24549818 24550119 -62127429 - AluSx SINE Alu -6 306 1 4128 187 63 28 chr18 24550119 24550188 -62127360 - L1MB8 LINE L1 -828 5350 5285 1546 159 74 0 chr18 24550188 24550458 -62127090 - AluJo SINE Alu -22 290 1 4128 187 63 28 chr18 24550458 24551188 -62126360 - L1MB8 LINE L1 -893 5285 4438 2267 103 3 3 chr18 24551188 24551489 -62126059 - AluSc SINE Alu -8 301 1 4128 187 63 28 chr18 24551489 24551626 -62125922 - L1MB8 LINE L1 -1740 4438 4307 251 156 117 39 chr18 24551639 24551716 -62125832 - L1MEc LINE L1 -4894 1225 1143 618 150 124 0 chr18 24551957 24552070 -62125478 + FLAM_C SINE Alu 1 127 -6 969 191 242 0 chr18 24552216 24552447 -62125101 + AluJo SINE Alu 1 287 -15 315 122 0 0 chr18 24552447 24552496 -62125052 + (GGGGA)n Simple_repeat Simple_repeat 1 49 0 2352 95 0 0 chr18 24552538 24552833 -62124715 + AluSg SINE Alu 1 295 -15 1505 186 52 4 chr18 24553891 24554160 -62123388 - AluJo SINE Alu -30 282 1 1383 201 0 4 chr18 24554925 24555184 -62122364 + AluSx SINE Alu 54 311 -1 496 335 112 6 chr18 24555196 24555536 -62122012 + L3 LINE CR1 1201 1576 -1 264 275 317 0 chr18 24556306 24556448 -62121100 - MIR SINE MIR -3 259 73 255 196 0 0 chr18 24558721 24558767 -62118781 + L2 LINE L2 3261 3306 -7 532 296 9 42 chr18 24558769 24558982 -62118566 - MIR3 SINE MIR 0 208 3 1812 153 30 24 chr18 24559243 24559538 -62118010 + AluSx SINE Alu 2 298 -14 2217 101 3 32 chr18 24559652 24559968 -62117580 - AluSc SINE Alu -2 307 1 453 193 123 0 chr18 24559988 24560102 -62117446 - L1M4 LINE L1 -1712 4434 4307 251 156 117 39 chr18 24560115 24560192 -62117356 - L1MEd LINE L1 -4894 1225 1143 1271 187 111 34 chr18 24560433 24560695 -62116853 + AluJo SINE Alu 1 282 -30 23 33 0 0 chr18 24560736 24560766 -62116782 + AT_rich Low_complexity Low_complexity 1 30 0 546 178 0 0 chr18 24560775 24560865 -62116683 + AluJ/FLAM SINE Alu 2 91 -221 21 36 0 0 chr18 24560885 24560913 -62116635 + AT_rich Low_complexity Low_complexity 1 28 0 4209 137 87 19 chr18 24561075 24561918 -62115630 - L1MC1 LINE L1 -245 6088 5186 463 319 40 52 chr18 24561919 24562248 -62115300 - L1ME LINE L1 -432 5734 5410 22 70 0 0 chr18 24562381 24562424 -62115124 + AT_rich Low_complexity Low_complexity 1 43 0 1770 147 18 11 chr18 24563655 24563927 -62113621 - AluJo SINE Alu -24 288 15 1343 172 48 76 chr18 24565569 24565691 -62111857 + AluJb SINE Alu 1 125 -187 2070 130 13 13 chr18 24565691 24565998 -62111550 + AluSx SINE Alu 1 307 -5 1343 172 48 76 chr18 24565998 24566165 -62111383 + AluJb SINE Alu 125 282 -30 215 200 30 10 chr18 24566193 24566293 -62111255 + (TA)n Simple_repeat Simple_repeat 1 102 0 1480 192 7 36 chr18 24566871 24567178 -62110370 + AluJb SINE Alu 1 298 -14 254 290 60 10 chr18 24569767 24569867 -62107681 + MIR SINE MIR 88 192 -70 243 0 0 0 chr18 24570088 24570115 -62107433 + (A)n Simple_repeat Simple_repeat 1 27 0 1681 141 0 88 chr18 24570123 24570260 -62107288 + AluJb SINE Alu 1 96 -216 2303 101 10 3 chr18 24570260 24570568 -62106980 + AluSp SINE Alu 1 310 -3 1681 141 0 88 chr18 24570568 24570749 -62106799 + AluJb SINE Alu 96 291 -21 6752 127 137 116 chr18 24570854 24572514 -62105034 - pTR5 LTR ERV1 0 2438 743 585 223 108 0 chr18 24572514 24572680 -62104868 - MIR SINE MIR -61 201 18 2345 76 17 0 chr18 24573927 24574216 -62103332 + AluY SINE Alu 1 294 -17 188 261 68 45 chr18 24575350 24575438 -62102110 - MIR3 SINE MIR -46 162 73 361 242 125 29 chr18 24575730 24575887 -62101661 + MIR SINE MIR 23 192 -63 376 145 29 0 chr18 24575982 24576051 -62101497 - L1MB7 LINE L1 -9 6175 6105 697 59 69 0 chr18 24576338 24576440 -62101108 - HY1 scRNA scRNA -3 109 1 1965 136 0 13 chr18 24576838 24577140 -62100408 + AluJb SINE Alu 1 298 -14 1832 165 17 0 chr18 24577148 24577445 -62100103 + AluJo SINE Alu 1 302 -10 279 198 79 59 chr18 24577584 24577685 -62099863 - MIR SINE MIR -66 142 40 1805 123 58 0 chr18 24578906 24579182 -62098366 + AluSq SINE Alu 1 292 -21 723 174 28 51 chr18 24579223 24579401 -62098147 + FRAM SINE Alu 1 174 -2 588 163 0 0 chr18 24579453 24579551 -62097997 - AluJb SINE Alu -5 307 210 455 94 0 0 chr18 24579581 24579645 -62097903 - AluJb SINE Alu -197 115 52 202 307 44 18 chr18 24579971 24580085 -62097463 + MIR SINE MIR 36 152 -56 195 42 0 0 chr18 24581290 24581314 -62096234 + (CGGGG)n Simple_repeat Simple_repeat 4 27 0 371 200 0 0 chr18 24581977 24582052 -62095496 + MER5A DNA MER1_type 1 75 -114 1143 149 35 40 chr18 24582052 24582253 -62095295 + AluJo SINE Alu 86 285 -27 1396 188 55 11 chr18 24582254 24582525 -62095023 - MER39 LTR ERV1 -421 286 4 1908 162 0 9 chr18 24582994 24583309 -62094239 - AluSx SINE Alu 0 312 1 386 239 156 82 chr18 24583548 24583639 -62093909 - L1ME LINE L1 -343 5778 5695 1713 130 111 0 chr18 24583639 24583901 -62093647 - AluJb SINE Alu -21 291 1 386 239 156 82 chr18 24583901 24584052 -62093496 - L1ME LINE L1 -426 5695 5518 22 56 0 0 chr18 24584067 24584103 -62093445 + AT_rich Low_complexity Low_complexity 1 36 0 2228 103 3 29 chr18 24584105 24584240 -62093308 + AluSx SINE Alu 1 138 -174 2067 101 4 4 chr18 24584240 24584508 -62093040 + AluSq SINE Alu 1 268 -45 2284 105 0 0 chr18 24584513 24584809 -62092739 + AluSc SINE Alu 1 296 -13 2228 103 3 29 chr18 24584809 24584977 -62092571 + AluSx SINE Alu 142 302 -10 830 204 13 0 chr18 24585086 24585238 -62092310 - AluJb SINE Alu -26 286 133 23 54 0 0 chr18 24585272 24585309 -62092239 + AT_rich Low_complexity Low_complexity 1 37 0 1362 200 33 80 chr18 24585512 24585877 -62091671 - MLT1A2 LTR MaLR -26 348 1 784 161 121 77 chr18 24585891 24586139 -62091409 + ORSL DNA AcHobo 1 259 -16 1473 208 91 77 chr18 24586459 24586522 -62091026 - L1ME3 LINE L1 -2 6160 6099 1821 169 3 3 chr18 24586522 24586823 -62090725 - AluSx SINE Alu -11 301 1 1473 208 91 77 chr18 24586823 24586850 -62090698 - L1ME3 LINE L1 -63 6099 6074 2306 163 100 24 chr18 24586850 24587073 -62090475 - MLT1F LTR MaLR -2 540 335 2390 97 0 0 chr18 24587073 24587373 -62090175 + AluSx SINE Alu 1 300 -12 2306 163 100 24 chr18 24587373 24587651 -62089897 - MLT1F LTR MaLR -207 335 1 1473 208 91 77 chr18 24587651 24588065 -62089483 - L1ME3 LINE L1 -88 6074 5648 203 59 0 29 chr18 24588648 24588682 -62088866 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 2084 125 0 0 chr18 24588685 24588972 -62088576 - AluSx SINE Alu -25 287 1 1721 161 39 7 chr18 24589017 24589302 -62088246 - AluJb SINE Alu -18 294 1 1848 173 3 0 chr18 24589716 24590011 -62087537 + AluJb SINE Alu 1 296 -16 2294 98 0 3 chr18 24590350 24590655 -62086893 - AluSg SINE Alu -6 304 1 557 101 13 0 chr18 24590920 24590999 -62086549 - FLAM_A SINE Alu -23 119 40 335 296 135 29 chr18 24591034 24591294 -62086254 + L2 LINE L2 2147 2463 -851 2024 186 71 102 chr18 24591294 24591874 -62085674 + MER68 LTR ERV1 1 562 0 335 296 135 29 chr18 24591874 24591998 -62085550 + L2 LINE L2 2463 2572 -742 398 224 20 95 chr18 24592130 24592277 -62085271 + MIR SINE MIR 121 256 -6 1653 142 59 17 chr18 24592282 24592570 -62084978 - AluJb SINE Alu -3 309 10 336 336 40 24 chr18 24595842 24595967 -62081581 + L2 LINE L2 3143 3269 -3 1686 156 45 0 chr18 24595983 24596272 -62081276 - AluJb SINE Alu -10 302 1 2170 98 3 0 chr18 24596354 24596649 -62080899 - AluSx SINE Alu -14 298 3 388 197 26 0 chr18 24596851 24596927 -62080621 - Charlie1a DNA MER1_type -1 1454 1377 826 125 0 0 chr18 24596959 24597071 -62080477 + AluJb SINE Alu 7 118 -194 2942 152 113 10 chr18 24597109 24597666 -62079882 - Charlie1a DNA MER1_type -1418 1343 714 2142 112 0 7 chr18 24597666 24597971 -62079577 + AluSx SINE Alu 1 303 -9 2942 152 113 10 chr18 24597971 24598031 -62079517 - Charlie1a DNA MER1_type -2047 714 662 1639 160 12 170 chr18 24598032 24598110 -62079438 - Charlie1a DNA MER1_type -2260 501 412 1131 180 114 84 chr18 24598110 24598159 -62079389 + LTR47A LTR ERVL 1 47 -405 2191 101 3 0 chr18 24598159 24598455 -62079093 - AluSx SINE Alu -13 299 3 1131 180 114 84 chr18 24598455 24598844 -62078704 + LTR47A LTR ERVL 47 452 0 2216 95 0 0 chr18 24598849 24599144 -62078404 - AluSc SINE Alu -14 295 1 1639 160 12 170 chr18 24599144 24599227 -62078321 - Charlie1a DNA MER1_type -2353 408 314 2042 142 0 0 chr18 24599227 24599536 -62078012 - AluSx SINE Alu -3 309 1 1255 173 122 11 chr18 24599546 24599817 -62077731 - AluJo SINE Alu -11 301 1 1639 160 12 170 chr18 24599817 24599830 -62077718 - Charlie1a DNA MER1_type -2457 304 291 2233 84 0 0 chr18 24599830 24600142 -62077406 - AluSx SINE Alu 0 312 1 1639 160 12 170 chr18 24600142 24600425 -62077123 - Charlie1a DNA MER1_type -2470 291 108 1528 204 0 32 chr18 24600425 24600734 -62076814 - AluJo SINE Alu -2 300 2 1639 160 12 170 chr18 24600734 24600768 -62076780 - Charlie1a DNA MER1_type -2653 108 70 893 149 0 0 chr18 24600792 24600926 -62076622 - AluJo SINE Alu -178 134 1 370 243 0 0 chr18 24600928 24600998 -62076550 - Charlie1a DNA MER1_type -1379 76 7 891 156 32 0 chr18 24601034 24601188 -62076360 + FRAM SINE Alu 1 159 -17 583 267 224 5 chr18 24602348 24602558 -62074990 + L2 LINE L2 3017 3272 0 3465 148 18 85 chr18 24602893 24603165 -62074383 + LTR8 LTR ERV1 1 290 -401 1476 116 143 8 chr18 24603165 24603424 -62074124 + AluSg SINE Alu 1 294 -16 3465 148 18 85 chr18 24603424 24603892 -62073656 + LTR8 LTR ERV1 290 691 0 25 0 0 0 chr18 24604366 24604391 -62073157 + AT_rich Low_complexity Low_complexity 1 25 0 2100 103 0 7 chr18 24604513 24604805 -62072743 + AluSc SINE Alu 1 290 -19 868 152 0 0 chr18 24604830 24604962 -62072586 + FLAM_C SINE Alu 1 132 -1 182 37 37 0 chr18 24604970 24604997 -62072551 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 1492 156 4 36 chr18 24605025 24605301 -62072247 - AluJb SINE Alu -44 268 2 2154 104 0 3 chr18 24605724 24606023 -62071525 + AluSx SINE Alu 1 298 -14 1868 141 3 16 chr18 24607487 24607799 -62069749 - AluSx SINE Alu -4 308 1 2226 84 3 0 chr18 24607929 24608225 -62069323 - AluY SINE Alu -14 297 1 1036 75 8 0 chr18 24608225 24608359 -62069189 - AluSq/x SINE Alu -178 135 1 1911 137 31 0 chr18 24608397 24608689 -62068859 - AluSq SINE Alu -12 301 1 684 97 0 142 chr18 24608864 24609019 -62068529 + FLAM_C SINE Alu 1 133 0 940 184 89 66 chr18 24609298 24609374 -62068174 + MER58B DNA MER1_type 1 74 -2346 1244 218 53 0 chr18 24609374 24609640 -62067908 - AluJo SINE Alu -30 282 3 940 184 89 66 chr18 24609640 24609762 -62067786 + MER58B DNA MER1_type 74 192 -2228 1604 148 46 14 chr18 24609762 24610045 -62067503 - AluJo SINE Alu -20 292 1 940 184 89 66 chr18 24610045 24610149 -62067399 + MER58B DNA MER1_type 192 311 -30 380 78 26 60 chr18 24610210 24610326 -62067222 + (TA)n Simple_repeat Simple_repeat 1 112 0 347 253 0 62 chr18 24610339 24610501 -62067047 + (TATG)n Simple_repeat Simple_repeat 2 153 0 414 250 0 62 chr18 24610516 24610708 -62066840 + (TATG)n Simple_repeat Simple_repeat 1 180 0 421 246 0 63 chr18 24610726 24610917 -62066631 + (TATG)n Simple_repeat Simple_repeat 2 180 0 358 184 17 69 chr18 24610846 24611020 -62066528 + (TA)n Simple_repeat Simple_repeat 2 166 0 * 1191 209 51 0 chr18 24611042 24611276 -62066272 + AluJo SINE Alu 45 290 -22 406 26 0 65 chr18 24611289 24611366 -62066182 + (TA)n Simple_repeat Simple_repeat 1 72 0 29 98 0 0 chr18 24611406 24611498 -62066050 + AT_rich Low_complexity Low_complexity 1 92 0 249 19 19 77 chr18 24611523 24611575 -62065973 + (TATAA)n Simple_repeat Simple_repeat 3 51 0 225 143 95 0 chr18 24611597 24611639 -62065909 + MER58B DNA MER1_type 296 341 0 2020 106 11 3 chr18 24611688 24611995 -62065553 + AluSx SINE Alu 1 309 0 1619 120 162 0 chr18 24613091 24613350 -62064198 + AluSx SINE Alu 1 301 -1 1505 167 18 33 chr18 24616446 24616722 -62060826 - AluJo SINE Alu -27 285 14 254 303 61 18 chr18 24616843 24617008 -62060540 - L2 LINE L2 -192 3080 2909 207 100 0 0 chr18 24617307 24617337 -62060211 + (CCTA)n Simple_repeat Simple_repeat 1 30 0 1953 122 0 0 chr18 24617339 24617618 -62059930 - AluSx SINE Alu -33 279 1 202 250 83 0 chr18 24617721 24617781 -62059767 + MIR SINE MIR 78 142 -66 822 132 8 8 chr18 24618258 24618387 -62059161 + FLAM_C SINE Alu 5 133 0 2321 61 0 3 chr18 24618399 24618692 -62058856 - AluY SINE Alu -18 293 2 35 24 0 0 chr18 24618693 24618735 -62058813 + AT_rich Low_complexity Low_complexity 1 42 0 2145 125 0 3 chr18 24618934 24619247 -62058301 + AluSx SINE Alu 1 312 0 406 200 0 0 chr18 24619805 24619880 -62057668 + MER5A DNA MER1_type 1 75 -114 1085 154 30 35 chr18 24619880 24620081 -62057467 + AluJo SINE Alu 86 285 -27 1400 188 55 11 chr18 24620082 24620353 -62057195 - MER39 LTR ERV1 -421 286 4 1895 147 0 10 chr18 24620833 24621146 -62056402 - AluSx SINE Alu -2 310 1 383 238 170 80 chr18 24621386 24621477 -62056071 - L1MC/D LINE L1 -343 5778 5697 1563 137 111 0 chr18 24621477 24621739 -62055809 - AluJb SINE Alu -21 291 1 383 238 170 80 chr18 24621739 24621943 -62055605 - L1MC/D LINE L1 -424 5697 5513 2014 99 3 31 chr18 24621943 24622078 -62055470 + AluSx SINE Alu 1 138 -172 1948 101 4 4 chr18 24622078 24622346 -62055202 + AluSq SINE Alu 1 268 -45 2189 101 0 0 chr18 24622351 24622648 -62054900 + AluSc SINE Alu 1 297 -12 2014 99 3 31 chr18 24622648 24622824 -62054724 + AluSx SINE Alu 142 310 0 383 238 170 80 chr18 24622824 24622902 -62054646 - L1MC/D LINE L1 -608 5513 5357 885 198 11 0 chr18 24622903 24623080 -62054468 - AluJb SINE Alu -1 311 133 23 54 0 0 chr18 24623115 24623152 -62054396 + AT_rich Low_complexity Low_complexity 1 37 0 1338 203 33 80 chr18 24623355 24623720 -62053828 - MLT1A2 LTR MaLR -26 348 1 768 141 137 93 chr18 24623734 24623982 -62053566 + ORSL DNA AcHobo 1 259 -16 1498 206 91 77 chr18 24624302 24624365 -62053183 - L1ME3 LINE L1 -2 6160 6099 1930 149 0 0 chr18 24624365 24624666 -62052882 - AluSx SINE Alu -11 301 1 1498 206 91 77 chr18 24624666 24624693 -62052855 - L1ME3 LINE L1 -63 6099 6074 2302 165 100 24 chr18 24624693 24624916 -62052632 - MLT1F LTR MaLR -2 540 335 2258 97 0 0 chr18 24624916 24625216 -62052332 + AluSx SINE Alu 1 300 -12 2302 165 100 24 chr18 24625216 24625494 -62052054 - MLT1F LTR MaLR -207 335 1 1498 206 91 77 chr18 24625494 24625908 -62051640 - L1ME3 LINE L1 -88 6074 5648 203 59 0 29 chr18 24626491 24626525 -62051023 + (TTTTA)n Simple_repeat Simple_repeat 2 34 0 1964 125 0 0 chr18 24626528 24626815 -62050733 - AluSx SINE Alu -25 287 1 1607 161 39 7 chr18 24626860 24627145 -62050403 - AluJb SINE Alu -18 294 1 1695 184 3 0 chr18 24627559 24627853 -62049695 + AluJb SINE Alu 1 295 -17 2162 115 0 3 chr18 24628194 24628498 -62049050 - AluSx SINE Alu -9 303 1 226 371 0 34 chr18 24628922 24629011 -62048537 - L3 LINE CR1 -419 1158 1073 1064 138 0 16 chr18 24629020 24629209 -62048339 + AluJb SINE Alu 127 312 0 553 246 69 17 chr18 24629270 24629445 -62048103 - L3 LINE CR1 -553 1024 841 246 290 28 28 chr18 24629562 24629669 -62047879 + MER5A DNA MER1_type 56 162 -27 * 273 240 66 66 chr18 24629587 24629708 -62047840 - MER5A DNA MER1_type -68 121 1 207 0 0 0 chr18 24630045 24630068 -62047480 + (TATG)n Simple_repeat Simple_repeat 4 26 0 1244 175 16 23 chr18 24630068 24630325 -62047223 - AluJo SINE Alu -34 278 24 832 154 0 0 chr18 24630351 24630474 -62047074 - FLAM_C SINE Alu -10 123 1 1836 136 36 0 chr18 24630495 24630774 -62046774 - AluJb SINE Alu -23 289 1 21 71 0 0 chr18 24631147 24631189 -62046359 + AT_rich Low_complexity Low_complexity 1 42 0 1747 180 0 0 chr18 24631300 24631606 -62045942 - AluJb SINE Alu -6 306 1 231 36 0 0 chr18 24631900 24631928 -62045620 + (T)n Simple_repeat Simple_repeat 1 28 0 2004 125 3 3 chr18 24632138 24632433 -62045115 - AluSx SINE Alu -17 295 1 360 0 0 0 chr18 24632442 24632482 -62045066 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 2114 104 0 0 chr18 24632497 24632776 -62044772 - AluSc SINE Alu -30 279 1 287 234 72 126 chr18 24632780 24632891 -62044657 + MIR SINE MIR 47 151 -111 981 191 242 0 chr18 24632891 24633122 -62044426 + AluJo SINE Alu 1 287 -15 315 122 0 0 chr18 24633122 24633171 -62044377 + (GGGGA)n Simple_repeat Simple_repeat 1 49 0 2146 104 0 7 chr18 24633213 24633511 -62044037 + AluSg SINE Alu 1 296 -14 1712 206 6 3 chr18 24633526 24633842 -62043706 - MER7A DNA MER2_type 0 346 32 377 247 12 0 chr18 24633860 24633945 -62043603 + MIR SINE MIR 159 244 -18 356 299 60 8 chr18 24634430 24634547 -62043001 + MIR SINE MIR 119 241 -21 472 344 38 21 chr18 24634624 24634912 -62042636 + L2 LINE L2 2287 2579 -735 268 333 111 13 chr18 24635967 24636120 -62041428 - MIR SINE MIR -6 256 89 1806 151 7 0 chr18 24636318 24636610 -62040938 + AluJo SINE Alu 1 294 -18 2277 94 0 0 chr18 24636734 24637043 -62040505 + AluSc SINE Alu 1 309 0 200 271 178 51 chr18 24637188 24637306 -62040242 - L2 LINE L2 -223 3049 2917 928 246 209 14 chr18 24638488 24638918 -62038630 + LTR33 LTR ERVL 3 516 -5 1360 96 30 0 chr18 24639032 24639230 -62038318 + AluSg/x SINE Alu 91 294 -18 447 293 86 11 chr18 24639403 24639577 -62037971 - MIR SINE MIR -2 260 74 610 270 17 23 chr18 24639850 24640024 -62037524 - MIR3 SINE MIR -16 192 20 1832 99 4 8 chr18 24641179 24641441 -62036107 - AluSc SINE Alu -22 287 27 924 195 36 10 chr18 24641842 24642037 -62035511 + AluJo SINE Alu 88 287 -25 467 203 74 55 chr18 24643844 24644007 -62033541 - LTR43 LTR ERV1 -306 296 131 5871 191 109 63 chr18 24644062 24645641 -62031907 - MER52A LTR ERV1 0 1755 1 1384 205 122 46 chr18 24646378 24646665 -62030883 - MLT1D LTR MaLR -6 499 163 2418 161 19 27 chr18 24646665 24646925 -62030623 - L1MB3 LINE L1 -2 6181 5925 2138 111 0 13 chr18 24646925 24647231 -62030317 + AluSx SINE Alu 1 302 -10 2418 161 19 27 chr18 24647231 24647449 -62030099 - L1MB3 LINE L1 -258 5925 5707 1384 205 122 46 chr18 24647449 24647620 -62029928 - MLT1D LTR MaLR -342 163 6 2319 88 0 13 chr18 24648461 24648769 -62028779 + AluSg SINE Alu 1 304 -6 1747 180 0 0 chr18 24649063 24649369 -62028179 + AluJb SINE Alu 1 306 -6 21 71 0 0 chr18 24649480 24649522 -62028026 + AT_rich Low_complexity Low_complexity 1 42 0 1836 136 36 0 chr18 24649895 24650174 -62027374 + AluJb SINE Alu 1 289 -23 832 154 0 0 chr18 24650195 24650318 -62027230 + FLAM_C SINE Alu 1 123 -10 1244 175 16 23 chr18 24650344 24650601 -62026947 + AluJo SINE Alu 24 278 -34 207 0 0 0 chr18 24650601 24650624 -62026924 + (CATA)n Simple_repeat Simple_repeat 4 26 0 273 240 66 66 chr18 24650961 24651082 -62026466 + MER5A DNA MER1_type 1 121 -68 246 290 28 28 chr18 24651000 24651107 -62026441 - MER5A DNA MER1_type -27 162 56 * 553 246 69 17 chr18 24651224 24651399 -62026149 + L3 LINE CR1 841 1024 -553 1064 138 0 16 chr18 24651460 24651649 -62025899 - AluJb SINE Alu 0 312 127 226 371 0 34 chr18 24651658 24651747 -62025801 + L3 LINE CR1 1073 1158 -419 2249 113 0 0 chr18 24652171 24652481 -62025067 + AluSx SINE Alu 1 310 -2 2107 90 0 0 chr18 24652892 24653170 -62024378 + AluSg SINE Alu 1 278 -32 471 310 8 8 chr18 24653998 24654127 -62023421 + MER5B DNA MER1_type 3 131 -47 180 0 0 0 chr18 24654226 24654246 -62023302 + (CA)n Simple_repeat Simple_repeat 2 21 0 186 143 0 0 chr18 24654504 24654539 -62023009 + (A)n Simple_repeat Simple_repeat 1 35 0 237 65 0 0 chr18 24655172 24655203 -62022345 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1783 145 0 20 chr18 24655225 24655521 -62022027 + AluJo SINE Alu 11 300 -12 744 190 0 0 chr18 24655528 24655644 -62021904 - FLAM_A SINE Alu -17 116 1 1069 158 0 11 chr18 24655763 24655946 -62021602 - AluJb SINE Alu 0 312 132 45 34 0 0 chr18 24655946 24656005 -62021543 + AT_rich Low_complexity Low_complexity 1 59 0 1792 125 22 58 chr18 24656118 24656303 -62021245 - AluSg SINE Alu -8 302 131 2109 95 6 13 chr18 24656303 24656618 -62020930 - AluSq SINE Alu 0 313 1 1792 125 22 58 chr18 24656618 24656745 -62020803 - AluSg SINE Alu -179 131 1 2052 118 3 25 chr18 24657478 24657793 -62019755 + AluSx SINE Alu 3 310 -2 28 0 0 0 chr18 24658053 24658081 -62019467 + GC_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chr18 24658100 24658123 -62019425 + (A)n Simple_repeat Simple_repeat 1 23 0 1769 146 37 22 chr18 24658623 24658915 -62018633 + MER4D LTR ERV1 1 300 -572 2186 90 0 34 chr18 24658915 24659236 -62018312 - AluSx SINE Alu -2 310 1 1769 146 37 22 chr18 24659236 24659265 -62018283 + MER4D LTR ERV1 300 327 -545 2676 10 0 0 chr18 24659293 24659592 -62017956 + AluYa5 SINE Alu 1 299 -12 270 280 13 0 chr18 24659859 24659934 -62017614 - ORSL DNA AcHobo 0 275 200 2058 140 85 3 chr18 24660931 24661295 -62016253 - L1MB7 LINE L1 -19 6165 5772 358 123 0 18 chr18 24661295 24661352 -62016196 + MLT1A2 LTR MaLR 8 63 -311 2103 169 45 50 chr18 24661396 24661610 -62015938 + MLT1A2-int LTR MaLR 1313 1526 -209 1836 123 33 20 chr18 24661610 24661912 -62015636 + AluJo SINE Alu 6 311 -1 2103 169 45 50 chr18 24661912 24662116 -62015432 + MLT1A2-int LTR MaLR 1526 1729 -6 1335 219 66 33 chr18 24662116 24662449 -62015099 + MLT1A2 LTR MaLR 2 345 -29 2027 125 14 0 chr18 24662463 24662759 -62014789 - AluSx SINE Alu -12 300 1 2349 142 33 79 chr18 24662759 24662944 -62014604 - L1MB7 LINE L1 -404 5780 5588 2262 110 0 0 chr18 24662944 24663253 -62014295 + AluSc SINE Alu 1 309 0 2349 142 33 79 chr18 24663253 24663310 -62014238 - L1MB7 LINE L1 -596 5588 5530 2304 99 0 0 chr18 24663310 24663622 -62013926 + AluSx SINE Alu 1 312 0 2349 142 33 79 chr18 24663622 24663899 -62013649 - L1MB7 LINE L1 -654 5530 5284 895 319 135 42 chr18 24663899 24664006 -62013542 + L2 LINE L2 1658 1754 -1560 1975 103 4 4 chr18 24664006 24664287 -62013261 + AluSq SINE Alu 1 281 -32 183 42 0 0 chr18 24664287 24664311 -62013237 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 895 319 135 42 chr18 24664311 24664874 -62012674 + L2 LINE L2 1753 2392 -922 2093 94 0 10 chr18 24664905 24665202 -62012346 + AluSq SINE Alu 1 294 -19 386 365 47 43 chr18 24665402 24665635 -62011913 + MIR SINE MIR 29 262 0 267 79 0 0 chr18 24666095 24666133 -62011415 + (CACCC)n Simple_repeat Simple_repeat 4 41 0 21 36 0 0 chr18 24666133 24666161 -62011387 + GC_rich Low_complexity Low_complexity 1 28 0 31 92 0 0 chr18 24666324 24666411 -62011137 + GC_rich Low_complexity Low_complexity 1 87 0 272 281 43 6 chr18 24666506 24666670 -62010878 + (CA)n Simple_repeat Simple_repeat 1 170 0 2028 135 0 3 chr18 24667130 24667441 -62010107 + AluJb SINE Alu 3 312 0 2095 125 3 0 chr18 24667803 24668115 -62009433 - AluSq SINE Alu 0 313 1 281 258 156 56 chr18 24668152 24668326 -62009222 - MIR SINE MIR -3 259 20 301 302 192 44 chr18 24668662 24668844 -62008704 - MIR SINE MIR -44 218 10 2287 100 0 0 chr18 24669442 24669752 -62007796 - AluSg SINE Alu 0 310 1 1693 151 20 16 chr18 24669870 24670175 -62007373 - AluJo SINE Alu -6 306 1 23 0 0 0 chr18 24670179 24670202 -62007346 + AT_rich Low_complexity Low_complexity 1 23 0 689 206 8 0 chr18 24670202 24670328 -62007220 - FLAM_C SINE Alu -5 128 2 255 185 37 74 chr18 24670414 24670495 -62007053 + MLT1L LTR MaLR 1 78 -537 484 272 83 82 chr18 24670583 24670804 -62006744 + MLT1L LTR MaLR 123 339 -172 1961 128 7 3 chr18 24670845 24671151 -62006397 - AluSq SINE Alu -6 307 1 287 254 70 70 chr18 24671192 24671266 -62006282 - L1ME4a LINE L1 -227 5894 5821 1922 117 0 24 chr18 24671266 24671576 -62005972 - AluSq SINE Alu 0 304 2 287 254 70 70 chr18 24671576 24671685 -62005863 - L1ME4a LINE L1 -299 5822 5710 1988 127 0 3 chr18 24671896 24672196 -62005352 + AluSx SINE Alu 10 308 -4 439 92 163 102 chr18 24672207 24672305 -62005243 + AluJb SINE Alu 85 188 -124 926 193 0 11 chr18 24672633 24672820 -62004728 - AluJo SINE Alu 0 312 128 656 147 19 19 chr18 24672820 24672976 -62004572 + CT-rich Low_complexity Low_complexity 3 158 0 748 169 23 0 chr18 24672976 24673106 -62004442 - AluJo SINE Alu -169 133 1 314 375 42 0 chr18 24674162 24674282 -62003266 + L2 LINE L2 3148 3272 0 387 0 0 0 chr18 24674675 24674718 -62002830 + (TG)n Simple_repeat Simple_repeat 1 43 0 2062 94 10 19 chr18 24676324 24676632 -62000916 + AluSc SINE Alu 1 305 -4 421 222 9 9 chr18 24676651 24676759 -62000789 - L1MA9 LINE L1 -25 6287 6180 697 143 25 8 chr18 24676761 24676880 -62000668 - L1MA9 LINE L1 -231 6081 5961 342 318 119 8 chr18 24676903 24677029 -62000519 - MIR SINE MIR -50 212 73 1786 168 10 0 chr18 24677559 24677863 -61999685 - AluJb SINE Alu -5 307 1 1785 119 0 0 chr18 24677989 24678242 -61999306 - AluSx SINE Alu -17 295 43 352 271 84 0 chr18 24678332 24678439 -61999109 - MER5C DNA MER1_type -197 127 12 22 35 0 0 chr18 24678771 24678800 -61998748 + AT_rich Low_complexity Low_complexity 1 29 0 769 108 0 0 chr18 24679337 24679439 -61998109 - FRAM SINE Alu -17 159 58 525 234 168 43 chr18 24679450 24679659 -61997889 - MLT1H LTR MaLR 0 549 321 255 191 0 0 chr18 24679710 24679752 -61997796 - MLT1F LTR MaLR -313 282 241 1247 111 0 0 chr18 24679755 24679935 -61997613 - AluSq SINE Alu 0 313 134 280 246 58 0 chr18 24680030 24680099 -61997449 - MLT1F LTR MaLR -446 96 24 419 291 71 8 chr18 24680978 24681105 -61996443 - L2 LINE L2 -1 3271 3137 278 49 195 0 chr18 24681215 24681256 -61996292 - MLT2D LTR ERVL 0 414 366 252 246 0 0 chr18 24681269 24681338 -61996210 + (TA)n Simple_repeat Simple_repeat 1 69 0 2768 209 13 17 chr18 24681366 24681894 -61995654 - MLT2B3 LTR ERVL -40 503 1 911 194 68 5 chr18 24682236 24682427 -61995121 + MER3 DNA MER1_type 2 204 -5 276 330 100 0 chr18 24682433 24682533 -61995015 - L2 LINE L2 -610 2704 2595 384 325 108 4 chr18 24682811 24683042 -61994506 - L2 LINE L2 -635 2679 2425 709 161 0 88 chr18 24683282 24683419 -61994129 - FLAM_C SINE Alu -8 125 1 240 35 0 0 chr18 24683423 24683452 -61994096 + (TC)n Simple_repeat Simple_repeat 2 30 0 2042 116 0 0 chr18 24683454 24683746 -61993802 - AluSq SINE Alu -13 300 9 362 224 0 13 chr18 24683758 24683834 -61993714 - MLT1J LTR MaLR -335 176 102 1415 153 51 29 chr18 24684550 24684963 -61992585 + AluJo SINE Alu 1 419 0 213 333 0 71 chr18 24685200 24685299 -61992249 + MIR SINE MIR 90 181 -81 29 47 0 0 chr18 24685532 24685575 -61991973 + AT_rich Low_complexity Low_complexity 1 43 0 636 187 0 0 chr18 24685583 24685690 -61991858 - FLAM_C SINE Alu -35 108 2 1952 124 0 3 chr18 24686365 24686656 -61990892 - AluSx SINE Alu -13 299 10 1583 201 0 3 chr18 24687687 24687996 -61989552 + AluJb SINE Alu 1 308 -4 2226 78 0 0 chr18 24688759 24689055 -61988493 - AluY SINE Alu -15 296 1 853 181 0 0 chr18 24689330 24689463 -61988085 + FLAM_C SINE Alu 1 133 0 35 0 0 0 chr18 24689463 24689498 -61988050 + AT_rich Low_complexity Low_complexity 1 35 0 2153 104 3 0 chr18 24689630 24689929 -61987619 - AluSq SINE Alu -13 300 1 3118 124 35 51 chr18 24689974 24690715 -61986833 - L1MB7 LINE L1 -7 6177 5358 3428 190 27 61 chr18 24690738 24690828 -61986720 - L1MB7 LINE L1 -855 5291 5199 1985 125 27 0 chr18 24690828 24691123 -61986425 - AluSx SINE Alu -9 303 1 3428 190 27 61 chr18 24691123 24691193 -61986355 - L1MB7 LINE L1 -947 5199 5128 189 0 0 0 chr18 24691193 24691214 -61986334 + (TG)n Simple_repeat Simple_repeat 2 22 0 1993 126 0 0 chr18 24691214 24691499 -61986049 - AluSx SINE Alu -27 285 1 3428 190 27 61 chr18 24691499 24692220 -61985328 - L1MB7 LINE L1 -1016 5130 4438 257 234 11 85 chr18 24692340 24692434 -61985114 + MIR3 SINE MIR 95 181 -27 869 178 0 0 chr18 24694098 24694272 -61983276 - AluJo SINE Alu -53 259 86 289 95 0 4 chr18 24694273 24694314 -61983234 - AluSp/q SINE Alu -53 250 216 450 0 0 0 chr18 24694319 24694369 -61983179 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 519 195 0 0 chr18 24694369 24694456 -61983092 - FLAM_C SINE Alu -20 123 37 383 211 172 52 chr18 24694808 24695026 -61982522 - Charlie7 DNA MER1_type -107 2505 2238 1890 154 0 0 chr18 24695026 24695318 -61982230 - AluJb SINE Alu -20 292 1 383 211 172 52 chr18 24695318 24695406 -61982142 - Charlie7 DNA MER1_type -374 2238 2162 778 243 0 0 chr18 24695406 24695558 -61981990 - MER45A DNA AcHobo -3 175 24 365 222 75 92 chr18 24695560 24695714 -61981834 - Charlie7 DNA MER1_type -449 2163 2013 2185 102 0 0 chr18 24695714 24696017 -61981531 - AluSq SINE Alu -10 303 1 365 222 75 92 chr18 24696017 24696101 -61981447 - Charlie7 DNA MER1_type -599 2013 1929 1054 214 61 64 chr18 24696101 24696512 -61981036 - L1M4c LINE L1 -4015 2369 1851 1914 99 62 0 chr18 24696512 24696785 -61980763 + AluSx SINE Alu 6 295 -17 1054 214 61 64 chr18 24696785 24696958 -61980590 - L1M4c LINE L1 -4533 1851 1679 276 254 30 0 chr18 24697406 24697473 -61980075 + MER91A DNA MER1_type 111 179 -17 946 248 29 33 chr18 24697888 24698130 -61979418 - MIR SINE MIR -21 241 1 183 286 43 14 chr18 24698214 24698284 -61979264 + L2 LINE L2 3125 3196 -76 795 199 30 17 chr18 24698556 24698744 -61978804 + MLT1C LTR MaLR 289 467 0 1955 118 87 0 chr18 24698985 24699272 -61978276 + AluSx SINE Alu 1 312 0 2113 123 3 0 chr18 24699956 24700241 -61977307 - AluSx SINE Alu -22 290 5 341 314 16 8 chr18 24700492 24700613 -61976935 + L3b LINE CR1 1264 1385 -198 1340 214 10 16 chr18 24700657 24700961 -61976587 + MER76 LTR ERV 1 302 -386 1407 149 4 56 chr18 24700974 24701223 -61976325 + MER46A DNA MER2_type 1 236 0 2114 158 22 6 chr18 24701223 24701585 -61975963 - MLT1B LTR MaLR -2 388 21 373 279 6 93 chr18 24701600 24701642 -61975906 + MER76 LTR ERV 512 556 -132 2604 53 3 0 chr18 24701642 24701946 -61975602 - AluY SINE Alu -2 309 5 373 279 6 93 chr18 24701946 24702064 -61975484 + MER76 LTR ERV 556 658 -30 354 211 55 78 chr18 24702186 24702314 -61975234 - L2 LINE L2 -8 3305 3181 407 105 0 0 chr18 24702413 24702470 -61975078 + Alu SINE Alu 5 61 -250 294 29 0 0 chr18 24702470 24702505 -61975043 + (GA)n Simple_repeat Simple_repeat 2 36 0 241 286 85 37 chr18 24702520 24702675 -61974873 - L2 LINE L2 -277 3036 2875 3084 133 39 60 chr18 24703189 24703755 -61973793 + MER41C LTR ERV1 1 554 0 478 294 180 9 chr18 24703919 24704130 -61973418 + MIR SINE MIR 4 250 -12 1855 151 0 0 chr18 24704137 24704439 -61973109 - AluJb SINE Alu 0 306 5 549 223 8 0 chr18 24705257 24705387 -61972161 - L2 LINE L2 -334 2979 2849 185 113 141 113 chr18 24705400 24705471 -61972077 - L2 LINE L2 -1635 1679 1607 256 209 66 0 chr18 24705596 24705687 -61971861 - L2 LINE L2 -1945 1369 1273 1792 146 33 26 chr18 24705770 24706072 -61971476 - AluJo SINE Alu -8 304 1 415 296 153 0 chr18 24706272 24706448 -61971100 + MIR SINE MIR 31 233 -29 303 302 108 7 chr18 24706556 24706695 -61970853 - MER5A DNA MER1_type -4 185 33 279 333 44 19 chr18 24706735 24706894 -61970654 - MIR SINE MIR -70 192 30 701 22 0 22 chr18 24707013 24707102 -61970446 + L1PA5 LINE L1 6068 6154 0 271 323 45 0 chr18 24707848 24707979 -61969569 + MIR SINE MIR 59 196 -66 453 180 0 0 chr18 24708892 24708981 -61968567 + (CA)n Simple_repeat Simple_repeat 2 90 0 2058 129 25 0 chr18 24708985 24709263 -61968285 - AluJb SINE Alu -27 285 1 1035 278 83 54 chr18 24709525 24710115 -61967433 - L1ME3A LINE L1 -284 5886 5280 1016 261 145 38 chr18 24710177 24710242 -61967306 - MLT1H1 LTR MaLR -5 550 493 2514 73 3 0 chr18 24710242 24710544 -61967004 + AluSp SINE Alu 1 303 -10 1016 261 145 38 chr18 24710544 24711012 -61966536 - MLT1H1 LTR MaLR -62 493 13 207 0 0 0 chr18 24711101 24711124 -61966424 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 364 119 17 17 chr18 24711124 24711183 -61966365 - AluJb SINE Alu -180 122 64 936 148 121 0 chr18 24711192 24711341 -61966207 - AluSg/x SINE Alu -12 300 134 663 291 126 58 chr18 24711345 24712190 -61965358 - L1ME3A LINE L1 -976 5170 4384 1588 139 71 65 chr18 24712190 24712500 -61965048 - AluJo SINE Alu 0 312 1 663 291 126 58 chr18 24712500 24712511 -61965037 - L1ME3A LINE L1 -1762 4384 4375 2131 134 0 7 chr18 24712511 24712818 -61964730 - AluJb SINE Alu -7 305 1 663 291 126 58 chr18 24712818 24712920 -61964628 - L1ME3A LINE L1 -1771 4375 4146 204 40 0 0 chr18 24713215 24713240 -61964308 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 34 42 0 0 chr18 24714253 24714301 -61963247 + AT_rich Low_complexity Low_complexity 1 48 0 396 281 53 9 chr18 24715063 24715177 -61962371 + MIR SINE MIR 39 157 -105 2481 67 7 0 chr18 24715544 24715843 -61961705 + AluSp SINE Alu 1 301 -12 2354 103 0 0 chr18 24717683 24717985 -61959563 + AluSx SINE Alu 1 302 -10 1857 152 16 3 chr18 24718094 24718417 -61959131 - L1MB3 LINE L1 -2 6181 5855 1572 140 37 34 chr18 24718417 24718738 -61958810 + L1MB8 LINE L1 5857 6178 0 662 236 109 60 chr18 24718753 24719084 -61958464 - L2 LINE L2 -1304 2010 1664 1976 156 0 3 chr18 24719609 24719904 -61957644 - AluSx SINE Alu -18 294 1 570 236 54 49 chr18 24720199 24720402 -61957146 + MIR SINE MIR 17 220 -42 23 0 0 0 chr18 24720404 24720427 -61957121 + AT_rich Low_complexity Low_complexity 1 23 0 1305 132 0 0 chr18 24720987 24721177 -61956371 - AluSg/x SINE Alu -2 310 121 28 0 0 0 chr18 24721177 24721205 -61956343 + AT_rich Low_complexity Low_complexity 1 28 0 2349 87 3 0 chr18 24721379 24721667 -61955881 - AluSg SINE Alu -21 289 1 917 316 47 35 chr18 24722591 24722996 -61954552 + LTR16C LTR ERVL 82 491 0 535 234 9 0 chr18 24723015 24723149 -61954399 + FLAM_A SINE Alu 4 138 0 402 184 0 156 chr18 24723753 24723894 -61953654 + L2 LINE L2 3192 3310 -3 2253 95 3 7 chr18 24724144 24724440 -61953108 - AluSc SINE Alu -2 307 13 1839 159 0 17 chr18 24724675 24724970 -61952578 + AluJo SINE Alu 3 292 -20 355 68 0 135 chr18 24724977 24725051 -61952497 + MLT2C1 LTR ERVL 349 396 -1 627 277 81 44 chr18 24725052 24725323 -61952225 - MLT1J2 LTR MaLR -52 398 118 543 178 47 19 chr18 24725288 24725395 -61952153 - MER63 DNA MER1_type -300 762 27 * 453 287 117 29 chr18 24726991 24727409 -61950139 + L1ME4a LINE L1 5596 6050 -71 475 313 24 9 chr18 24727451 24727662 -61949886 + MIR SINE MIR 45 258 -4 2652 117 3 0 chr18 24727684 24728070 -61949478 - L1PB1 LINE L1 -2 6149 5763 2246 114 0 3 chr18 24728910 24729209 -61948339 - AluSx SINE Alu -14 298 1 2069 139 7 0 chr18 24730407 24730716 -61946832 - AluSq SINE Alu -2 311 1 1184 175 44 0 chr18 24730718 24730969 -61946579 - L1PB1 LINE L1 -817 5329 5068 5112 122 12 14 chr18 24731073 24731928 -61945620 + L1P4 LINE L1 4576 5436 -732 185 266 32 65 chr18 24732433 24732587 -61944961 - L2 LINE L2 -289 2983 2835 2202 152 6 23 chr18 24732640 24732989 -61944559 + MER61A LTR ERV1 1 343 0 318 273 151 22 chr18 24733958 24734097 -61943451 + MIR SINE MIR 24 180 -82 245 307 79 0 chr18 24735555 24735669 -61941879 + MIR SINE MIR 23 145 -117 216 0 0 0 chr18 24735969 24735993 -61941555 + (CCCCG)n Simple_repeat Simple_repeat 1 24 0 197 182 18 0 chr18 24736442 24736497 -61941051 + C-rich Low_complexity Low_complexity 3 58 0 410 262 48 0 chr18 24737117 24737243 -61940305 + MIR SINE MIR 21 152 -110 1655 153 70 0 chr18 24738092 24738379 -61939169 + AluJo SINE Alu 1 307 -5 1445 115 0 50 chr18 24738491 24738709 -61938839 - AluSq SINE Alu -85 228 22 316 220 201 56 chr18 24739649 24739746 -61937802 - L1ME4a LINE L1 -5 6116 6034 1513 131 209 16 chr18 24739746 24740052 -61937496 - MLT1A1 LTR MaLR 0 365 1 316 220 201 56 chr18 24740052 24740222 -61937326 - L1ME4a LINE L1 -87 6034 5810 238 298 170 0 chr18 24740230 24740324 -61937224 - L2 LINE L2 -5 3308 3199 650 269 79 9 chr18 24740432 24740648 -61936900 + MIR SINE MIR 15 245 -17 203 138 0 0 chr18 24740657 24740686 -61936862 + (TAG)n Simple_repeat Simple_repeat 1 29 0 1495 188 8 0 chr18 24740960 24741210 -61936338 + AluJb SINE Alu 2 253 -59 2567 131 73 58 chr18 24742358 24742863 -61934685 + L1MB2 LINE L1 5644 6171 0 347 241 128 8 chr18 24742899 24743032 -61934516 + MER117 DNA MER1_type 1 149 -48 29 101 0 0 chr18 24743611 24743710 -61933838 + AT_rich Low_complexity Low_complexity 1 99 0 918 220 38 5 chr18 24745031 24745240 -61932308 + LTR33 LTR ERVL 1 216 -305 875 261 94 13 chr18 24745349 24745703 -61931845 + MLT1J2 LTR MaLR 59 408 -1 324 0 0 0 chr18 24746567 24746603 -61930945 + (A)n Simple_repeat Simple_repeat 1 36 0 553 266 23 0 chr18 24746976 24747104 -61930444 - MLT1J2 LTR MaLR -131 319 189 26 30 0 0 chr18 24747616 24747649 -61929899 + AT_rich Low_complexity Low_complexity 1 33 0 2226 133 0 0 chr18 24748221 24748523 -61929025 - AluSx SINE Alu -10 302 1 2189 123 27 0 chr18 24748589 24748889 -61928659 - AluSx SINE Alu -4 308 1 227 335 85 11 chr18 24749124 24749300 -61928248 + L2 LINE L2 2182 2370 -944 273 324 81 29 chr18 24751032 24751205 -61926343 + MIR SINE MIR 75 256 -6 1945 142 0 7 chr18 24751262 24751550 -61925998 + AluSx SINE Alu 1 286 -26 183 42 0 0 chr18 24752791 24752815 -61924733 + (CCCCCA)n Simple_repeat Simple_repeat 2 25 0 299 177 48 0 chr18 24753452 24753514 -61924034 - MER116 DNA Mariner 0 80 16 2360 97 3 0 chr18 24754165 24754463 -61923085 - AluSp SINE Alu -14 299 1 462 140 112 0 chr18 24755220 24755327 -61922221 - LTR16C LTR ERVL 0 491 373 356 244 37 52 chr18 24755362 24755497 -61922051 - LTR16C LTR ERVL -280 211 79 470 295 39 6 chr18 24755557 24755713 -61921835 - L2 LINE L2 -2 3311 3151 1414 234 92 35 chr18 24756223 24756603 -61920945 - L2 LINE L2 -172 3141 2784 198 0 0 0 chr18 24756603 24756625 -61920923 + (GAGAA)n Simple_repeat Simple_repeat 1 22 0 1414 234 92 35 chr18 24756625 24756885 -61920663 - L2 LINE L2 -529 2784 2393 668 239 86 20 chr18 24756887 24757142 -61920406 - L2 LINE L2 -1809 1505 1234 233 187 53 27 chr18 24757462 24757537 -61920011 - L2 LINE L2 0 3272 3196 240 200 0 0 chr18 24757644 24757694 -61919854 + GA-rich Low_complexity Low_complexity 2 51 0 198 242 10 81 chr18 24757702 24757801 -61919747 - L2 LINE L2 -215 3057 2966 738 194 26 63 chr18 24757913 24758104 -61919444 + MER91B DNA MER1_type 3 186 -4 379 342 43 26 chr18 24758130 24758361 -61919187 - L2 LINE L2 -520 2794 2560 1690 231 32 48 chr18 24758684 24759208 -61918340 - MER34 LTR ERV1 0 542 27 2019 127 17 0 chr18 24759599 24759912 -61917636 + AluSx SINE Alu 1 312 0 421 257 26 9 chr18 24760006 24760119 -61917429 + MIR SINE MIR 7 121 -141 295 286 78 0 chr18 24760804 24760881 -61916667 + MER117 DNA MER1_type 68 150 -47 30 27 0 0 chr18 24761200 24761237 -61916311 + AT_rich Low_complexity Low_complexity 1 37 0 526 68 0 0 chr18 24761650 24761723 -61915825 - L1MB4 LINE L1 -3 6177 6105 2923 255 66 36 chr18 24761922 24763439 -61914109 + L1ME2 LINE L1 78 1614 -4466 2201 112 7 3 chr18 24763482 24763777 -61913771 + AluSx SINE Alu 1 296 -16 6027 160 44 25 chr18 24763781 24764492 -61913056 + L1PA16 LINE L1 4124 4821 -1345 2178 124 16 0 chr18 24764492 24764798 -61912750 - AluSx SINE Alu 0 312 2 6027 160 44 25 chr18 24764798 24766078 -61911470 + L1PA16 LINE L1 4821 6156 -10 1555 245 89 51 chr18 24766303 24767132 -61910416 + L1ME2 LINE L1 1726 2531 -3549 * 2668 210 47 57 chr18 24767118 24767406 -61910142 + L1ME2 LINE L1 5040 5329 -769 2468 46 0 0 chr18 24767406 24767716 -61909832 + AluY SINE Alu 1 310 0 2668 210 47 57 chr18 24767716 24768472 -61909076 + L1ME2 LINE L1 5329 6064 -34 338 285 76 13 chr18 24768545 24768626 -61908922 + L1MC4 LINE L1 7827 7901 -141 186 103 0 0 chr18 24768626 24768655 -61908893 + (TGGA)n Simple_repeat Simple_repeat 1 29 0 338 285 76 13 chr18 24768655 24768731 -61908817 + L1MC4 LINE L1 7901 7994 -48 2282 109 0 0 chr18 24768971 24769264 -61908284 - AluSg SINE Alu -15 295 3 624 183 0 32 chr18 24769841 24769888 -61907660 - MER5C DNA MER1_type -202 122 75 309 26 0 0 chr18 24769888 24769926 -61907622 + (ATTG)n Simple_repeat Simple_repeat 2 39 0 2022 123 3 0 chr18 24769926 24770210 -61907338 - AluSx SINE Alu -27 285 1 624 183 0 32 chr18 24770210 24770287 -61907261 - MER5C DNA MER1_type -247 77 1 1866 160 0 16 chr18 24770308 24770620 -61906928 - AluJo SINE Alu -5 307 1 640 263 62 44 chr18 24770878 24771216 -61906332 + LTR33 LTR ERVL 141 484 -37 2367 103 0 0 chr18 24771339 24771639 -61905909 + AluSx SINE Alu 6 305 -7 405 39 0 0 chr18 24771698 24771749 -61905799 + (TG)n Simple_repeat Simple_repeat 2 52 0 250 285 81 41 chr18 24771773 24771896 -61905652 + L2 LINE L2 3145 3272 0 481 235 128 11 chr18 24772254 24772433 -61905115 - MIR SINE MIR -34 228 29 2401 95 7 0 chr18 24772944 24773250 -61904298 - AluSx SINE Alu -2 310 3 1301 105 50 10 chr18 24774318 24774518 -61903030 + L1PA16 LINE L1 5958 6165 -1 327 253 221 13 chr18 24774654 24774808 -61902740 - MER5A DNA MER1_type 0 189 4 562 345 61 4 chr18 24775256 24775485 -61902063 + MIR SINE MIR 15 256 -6 2116 134 45 25 chr18 24775846 24776203 -61901345 - THE1B LTR MaLR 0 364 1 550 229 18 0 chr18 24776276 24776385 -61901163 + MER81 DNA DNA 1 111 -3 345 311 0 0 chr18 24776490 24776580 -61900968 + MER5A DNA MER1_type 93 182 -7 479 301 88 37 chr18 24776888 24777104 -61900444 + MLT1I LTR MaLR 183 409 0 393 327 19 13 chr18 24778642 24778801 -61898747 - MIR SINE MIR -101 161 2 194 257 54 27 chr18 24780592 24780666 -61896882 - L2 LINE L2 -1026 2288 2213 265 302 65 45 chr18 24780887 24781132 -61896416 - L2 LINE L2 -1739 1575 1326 382 311 46 46 chr18 24781292 24781511 -61896037 - LTR67 LTR ERVL -243 314 96 2091 71 0 23 chr18 24783542 24783808 -61893740 - AluY SINE Alu -15 296 37 21 36 0 0 chr18 24784219 24784247 -61893301 + AT_rich Low_complexity Low_complexity 1 28 0 1223 229 55 138 chr18 24784247 24784456 -61893092 + L1MC4 LINE L1 7271 7496 -546 1957 119 0 0 chr18 24784456 24784725 -61892823 + AluSx SINE Alu 32 300 -12 1223 229 55 138 chr18 24784725 24785236 -61892312 + L1MC4 LINE L1 7496 7914 -128 261 0 0 0 chr18 24785236 24785265 -61892283 + (TG)n Simple_repeat Simple_repeat 2 30 0 1223 229 55 138 chr18 24785265 24785385 -61892163 + L1MC4 LINE L1 7914 8042 0 218 381 0 10 chr18 24785793 24785890 -61891658 - MIR SINE MIR -120 142 47 216 158 0 0 chr18 24786015 24786053 -61891495 + (TCCA)n Simple_repeat Simple_repeat 4 41 0 2672 52 0 3 chr18 24787135 24787443 -61890105 + AluY SINE Alu 1 307 -4 764 284 92 13 chr18 24787477 24787759 -61889789 + L1MC4 LINE L1 7609 7930 -112 225 0 0 0 chr18 24787759 24787784 -61889764 + (TG)n Simple_repeat Simple_repeat 2 26 0 764 284 92 13 chr18 24787784 24787881 -61889667 + L1MC4 LINE L1 7930 8018 -24 389 268 63 0 chr18 24788196 24788323 -61889225 + MIR SINE MIR 92 226 -36 332 246 29 0 chr18 24788921 24788990 -61888558 + Charlie1 DNA MER1_type 2 72 -2689 1949 162 37 12 chr18 24788994 24789395 -61888153 + Charlie1 DNA MER1_type 2343 2753 -8 719 239 101 10 chr18 24790373 24790582 -61886966 + MIR SINE MIR 14 241 -21 2390 78 7 7 chr18 24791564 24791873 -61885675 - AluY SINE Alu -2 309 1 2563 67 0 6 chr18 24791904 24792217 -61885331 - AluY SINE Alu 0 311 1 2330 74 7 0 chr18 24793005 24793289 -61884259 + AluSp SINE Alu 1 286 -27 21 0 0 0 chr18 24793372 24793393 -61884155 + AT_rich Low_complexity Low_complexity 1 21 0 269 325 12 0 chr18 24794701 24794784 -61882764 - MIR3 SINE MIR -39 169 86 391 307 120 10 chr18 24794986 24795178 -61882370 - MIR SINE MIR -1 261 49 355 338 50 0 chr18 24796023 24796183 -61881365 - MIR3 SINE MIR -5 203 36 1906 187 27 80 chr18 24797396 24797883 -61879665 + MLT1C LTR MaLR 7 467 0 338 214 0 0 chr18 24799842 24799912 -61877636 + MER5A DNA MER1_type 1 70 -119 227 188 138 75 chr18 24799912 24799992 -61877556 + L1M3e LINE L1 1380 1464 -5566 245 167 0 0 chr18 24800548 24800596 -61876952 + L1MB7 LINE L1 6128 6175 -9 356 274 37 22 chr18 24800743 24800878 -61876670 - MIR SINE MIR -117 145 9 1562 112 0 56 chr18 24801638 24801888 -61875660 + MER46A DNA MER2_type 1 236 0 225 305 116 11 chr18 24802420 24802515 -61875033 - L2 LINE L2 -4 3309 3205 551 244 6 49 chr18 24804286 24804450 -61873098 + L1MC/D LINE L1 5637 5793 -2202 * 573 257 101 0 chr18 24804443 24804622 -61872926 + L1ME LINE L1 5528 5724 -446 598 196 60 151 chr18 24804623 24804645 -61872903 + LTR52 LTR ERVL 1 23 -398 1730 184 3 7 chr18 24804645 24804938 -61872610 - AluJo SINE Alu -20 292 1 598 196 60 151 chr18 24804938 24805267 -61872281 + LTR52 LTR ERVL 23 320 -101 234 367 28 9 chr18 24805317 24805426 -61872122 - MIR SINE MIR -62 146 36 1379 133 78 0 chr18 24805566 24805784 -61871764 + MER46A DNA MER2_type 1 235 -1 1451 157 0 17 chr18 24805968 24806204 -61871344 + AluJo SINE Alu 77 308 -4 1164 146 16 0 chr18 24806451 24806636 -61870912 - MER5A DNA MER1_type -1 188 1 189 304 51 0 chr18 24807327 24807406 -61870142 - MIR SINE MIR -76 186 104 408 208 40 10 chr18 24808288 24808389 -61869159 + MARNA DNA Mariner 173 276 -310 228 233 0 0 chr18 24808460 24808503 -61869045 - L2 LINE L2 -80 3233 3191 318 237 21 11 chr18 24808503 24808596 -61868952 + MARNA DNA Mariner 292 385 -201 29 0 0 0 chr18 24808642 24808671 -61868877 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr18 24808992 24809016 -61868532 + (TA)n Simple_repeat Simple_repeat 2 25 0 511 301 94 31 chr18 24809087 24809502 -61868046 + L1M4 LINE L1 4235 4675 -1471 336 24 0 0 chr18 24810439 24810480 -61867068 + (TG)n Simple_repeat Simple_repeat 2 42 0 287 200 0 0 chr18 24812953 24813018 -61864530 - MER53 DNA DNA -4 185 121 * 291 137 88 98 chr18 24812977 24813079 -61864469 + MER53 DNA DNA 89 189 0 483 145 0 0 chr18 24813432 24813508 -61864040 + MER58B DNA MER1_type 266 341 0 790 252 137 0 chr18 24813509 24813735 -61863813 + MIR SINE MIR 5 261 -1 486 286 118 5 chr18 24813828 24814048 -61863500 - L1MC4a LINE L1 -1969 5839 5595 446 273 107 11 chr18 24814702 24814889 -61862659 + L3 LINE CR1 565 769 -808 288 340 82 50 chr18 24814879 24815197 -61862351 - L2 LINE L2 -4 3268 2941 * 943 298 111 53 chr18 24815415 24816364 -61861184 - L2 LINE L2 -625 2689 1686 1578 137 27 4 chr18 24816747 24817003 -61860545 + L1PB4 LINE L1 5895 6156 0 273 318 176 6 chr18 24817451 24817621 -61859927 + L2 LINE L2 2849 3047 -225 468 262 204 61 chr18 24819072 24819351 -61858197 + L2 LINE L2 2991 3309 -4 2902 226 50 31 chr18 24819394 24820169 -61857379 - MER21B LTR ERV1 -51 812 23 246 173 0 160 chr18 24820178 24820253 -61857295 - MER21B LTR ERV1 -766 97 35 26 0 0 0 chr18 24820323 24820349 -61857199 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr18 24820365 24820386 -61857162 + AT_rich Low_complexity Low_complexity 1 21 0 2259 121 13 0 chr18 24820392 24820699 -61856849 - AluJb SINE Alu -1 311 1 2236 110 7 3 chr18 24820834 24821133 -61856415 - AluSx SINE Alu -12 300 1 270 343 7 22 chr18 24821488 24821625 -61855923 - L2 LINE L2 0 3272 3138 2114 176 99 64 chr18 24822805 24823143 -61854405 - MLT1F1 LTR MaLR 0 567 242 330 26 0 0 chr18 24823143 24823182 -61854366 + (GA)n Simple_repeat Simple_repeat 1 39 0 2114 176 99 64 chr18 24823182 24823312 -61854236 - MLT1F1 LTR MaLR -325 242 75 2169 113 0 3 chr18 24823312 24823603 -61853945 + AluSx SINE Alu 11 300 -12 2114 176 99 64 chr18 24823603 24823677 -61853871 - MLT1F1 LTR MaLR -492 75 5 1828 159 3 34 chr18 24824348 24824668 -61852880 - AluJo SINE Alu -2 310 1 253 275 42 28 chr18 24824692 24824834 -61852714 - L1ME4a LINE L1 -3 6118 5975 1320 161 116 46 chr18 24825292 24825577 -61851971 - AluJo SINE Alu -7 305 1 1198 132 0 0 chr18 24826053 24826220 -61851328 - AluSx SINE Alu -95 217 51 1948 136 26 13 chr18 24827413 24827715 -61849833 + AluSx SINE Alu 2 307 -5 1301 163 26 13 chr18 24828290 24828523 -61849025 + MER46A DNA MER2_type 1 236 0 1207 167 21 0 chr18 24828662 24828874 -61848674 + AluJb SINE Alu 86 301 0 186 296 42 14 chr18 24828910 24828981 -61848567 + L2 LINE L2 3200 3272 0 323 157 9 19 chr18 24829199 24829306 -61848242 + L1MB7 LINE L1 5780 5928 -236 612 162 47 68 chr18 24829310 24829458 -61848090 + L1M4 LINE L1 1 145 -6397 448 196 9 36 chr18 24829457 24829569 -61847979 + L1M4 LINE L1 2289 2397 -4249 * 932 240 66 0 chr18 24829566 24829808 -61847740 + L1MB7 LINE L1 5918 6175 -9 24 0 0 0 chr18 24829808 24829832 -61847716 + AT_rich Low_complexity Low_complexity 1 24 0 193 298 24 81 chr18 24829859 24829983 -61847565 - MIR SINE MIR -27 235 119 1312 104 0 0 chr18 24830030 24830194 -61847354 + AluY SINE Alu 1 164 -147 434 105 0 0 chr18 24830194 24830251 -61847297 + AluSq/x SINE Alu 73 129 -184 2338 112 0 0 chr18 24830266 24830562 -61846986 + AluSg SINE Alu 1 296 -14 3660 153 37 12 chr18 24830567 24831239 -61846309 + L1MB1 LINE L1 5480 6168 0 1078 124 23 0 chr18 24832162 24832339 -61845209 + L1MA5A LINE L1 6107 6287 -10 2096 130 0 7 chr18 24834853 24835154 -61842394 - AluJb SINE Alu -13 299 1 925 188 18 12 chr18 24836019 24836189 -61841359 + FAM SINE Alu 1 171 -4 1218 109 0 0 chr18 24836862 24837027 -61840521 + AluSg/x SINE Alu 131 295 -15 346 312 14 9 chr18 24837342 24837472 -61840076 + CT-rich Low_complexity Low_complexity 1 130 0 2625 140 0 53 chr18 24838973 24839409 -61838139 - MLT2D LTR ERVL 0 414 2 1387 171 114 0 chr18 24839418 24839682 -61837866 - ERVL-D LTR ERVL -15 5749 5456 3774 135 20 2 chr18 24839689 24840296 -61837252 - L1MA5 LINE L1 0 6300 5683 2900 113 8 43 chr18 24840296 24840765 -61836783 + L1PA16 LINE L1 5710 6162 -4 2645 127 12 0 chr18 24840796 24841205 -61836343 - L1MA5 LINE L1 -606 5697 5284 7938 241 81 26 chr18 24841302 24841344 -61836204 - ERVL-D LTR ERVL -150 5335 5297 1192 179 49 0 chr18 24841344 24841568 -61835980 + MER46A DNA MER2_type 2 236 0 7938 241 81 26 chr18 24841568 24843680 -61833868 - ERVL-D LTR ERVL -188 5297 3063 * 8474 179 11 16 chr18 24843673 24843937 -61833611 - ERVL-D LTR ERVL -2840 2924 2660 2501 162 36 5 chr18 24843937 24844350 -61833198 + MSTB LTR MaLR 1 426 0 8474 179 11 16 chr18 24844350 24845562 -61831986 - ERVL-D LTR ERVL -3104 2660 1455 2914 269 69 13 chr18 24845556 24846498 -61831050 - ERVL-D LTR ERVL -4633 1021 27 * 663 198 17 0 chr18 24846498 24846614 -61830934 + FLAM_C SINE Alu 1 118 -15 327 70 105 18 chr18 24846660 24846717 -61830831 - Ricksha DNA DNA -1134 912 851 2249 149 29 2 chr18 24846739 24846752 -61830796 - MLT2D LTR ERVL -35 485 474 423 68 0 0 chr18 24846752 24846811 -61830737 + (TG)n Simple_repeat Simple_repeat 2 60 0 2249 149 29 2 chr18 24846811 24847168 -61830380 - MLT2D LTR ERVL -46 474 6 1232 215 113 3 chr18 24847456 24847758 -61829790 + MER2 DNA MER2_type 10 344 -1 205 281 56 34 chr18 24847761 24847850 -61829698 + L2 LINE L2 3180 3270 -2 632 301 51 5 chr18 24848422 24848638 -61828910 - MIR SINE MIR -10 252 27 623 324 22 5 chr18 24849353 24849596 -61827952 - MIR SINE MIR 0 262 18 1798 130 7 57 chr18 24851040 24851163 -61826385 + AluJo SINE Alu 5 133 -179 2292 113 0 0 chr18 24851163 24851473 -61826075 - AluSg SINE Alu 0 310 1 1798 130 7 57 chr18 24851473 24851648 -61825900 + AluJo SINE Alu 133 288 -24 22 35 0 0 chr18 24852766 24852795 -61824753 + AT_rich Low_complexity Low_complexity 1 29 0 2216 86 36 3 chr18 24852839 24853142 -61824406 - AluSq SINE Alu 0 313 1 24 77 0 0 chr18 24855135 24855187 -61822361 + AT_rich Low_complexity Low_complexity 1 52 0 279 71 0 0 chr18 24855441 24855483 -61822065 + (TTTTTG)n Simple_repeat Simple_repeat 6 47 0 1557 161 0 12 chr18 24856783 24857032 -61820516 + AluJo SINE Alu 54 299 -13 2277 84 0 3 chr18 24857184 24857470 -61820078 + AluSx SINE Alu 13 297 -15 393 221 81 20 chr18 24857903 24858052 -61819496 - L1ME4a LINE L1 -3 6118 5961 531 256 220 16 chr18 24858095 24858400 -61819148 - L1ME4a LINE L1 -242 5879 5513 268 263 100 12 chr18 24858702 24858782 -61818766 + L2 LINE L2 3186 3272 0 215 182 23 0 chr18 24858783 24858827 -61818721 + (TAAA)n Simple_repeat Simple_repeat 3 47 0 230 143 0 143 chr18 24859914 24859977 -61817571 - L1MB1 LINE L1 -103 6065 6012 195 100 0 0 chr18 24861415 24861445 -61816103 + (TG)n Simple_repeat Simple_repeat 2 31 0 301 314 9 19 chr18 24862894 24862999 -61814549 + L2 LINE L2 3209 3312 -1 1006 131 7 0 chr18 24863213 24863358 -61814190 + FAM SINE Alu 22 167 -18 277 200 0 82 chr18 24863390 24863475 -61814073 - MIR SINE MIR -2 260 183 275 211 0 13 chr18 24867792 24867868 -61809680 + (CATA)n Simple_repeat Simple_repeat 2 76 0 207 139 0 0 chr18 24867873 24867909 -61809639 + (TG)n Simple_repeat Simple_repeat 2 37 0 848 204 139 28 chr18 24868244 24868460 -61809088 - MER46C DNA MER2_type -16 322 83 300 246 18 0 chr18 24868999 24869056 -61808492 + MIR SINE MIR 12 69 -193 182 232 36 18 chr18 24869199 24869255 -61808293 - L2 LINE L2 -337 2977 2921 492 161 206 19 chr18 24870066 24870221 -61807327 + MIR SINE MIR 76 259 -3 1779 286 48 20 chr18 24870642 24871232 -61806316 + L1MB8 LINE L1 11 616 -6243 2625 244 35 49 chr18 24871243 24871641 -61805907 + L1MB8 LINE L1 1397 1799 -5160 2267 116 0 0 chr18 24871641 24871943 -61805605 + AluSq SINE Alu 1 302 -11 2625 244 35 49 chr18 24871943 24872515 -61805033 + L1MB8 LINE L1 1799 2353 -4606 4705 192 41 60 chr18 24872712 24874498 -61803050 + L1MB8 LINE L1 2473 6989 0 220 296 215 0 chr18 24874636 24874771 -61802777 - MIR3 SINE MIR -16 192 29 591 219 56 122 chr18 24874866 24875136 -61802412 - MER112 DNA MER1_type -4 252 1 2280 72 41 0 chr18 24875526 24875817 -61801731 - AluY SINE Alu -8 303 1 2050 143 0 13 chr18 24876091 24876398 -61801150 + AluSx SINE Alu 1 303 -9 1873 126 111 88 chr18 24876835 24877257 -61800291 - MSTB1 LTR MaLR 0 432 1 2535 151 97 19 chr18 24877538 24878056 -61799492 - MER74A LTR ERVL 0 558 1 3144 149 33 28 chr18 24878255 24878800 -61798748 - MER21A LTR ERV1 -6 925 378 1522 107 86 4 chr18 24878807 24879051 -61798497 - MER21A LTR ERV1 -667 264 1 21 36 0 0 chr18 24879788 24879816 -61797732 + AT_rich Low_complexity Low_complexity 1 28 0 1057 277 123 36 chr18 24880224 24880469 -61797079 - MLT1K LTR MaLR -4 584 362 1827 195 38 35 chr18 24880469 24880838 -61796710 + MLT1A2 LTR MaLR 4 373 -1 1057 277 123 36 chr18 24880838 24881094 -61796454 - MLT1K LTR MaLR -226 362 39 806 160 38 0 chr18 24881348 24881479 -61796069 - AluJo SINE Alu -176 136 1 2262 104 0 3 chr18 24882072 24882370 -61795178 + AluSx SINE Alu 1 297 -15 346 312 14 9 chr18 24882689 24882819 -61794729 + CT-rich Low_complexity Low_complexity 1 130 0 2760 140 0 53 chr18 24884320 24884756 -61792792 - MLT2D LTR ERVL 0 414 2 1396 171 114 0 chr18 24884765 24885029 -61792519 - ERVL-D LTR ERVL -15 5749 5456 3948 134 20 2 chr18 24885036 24885641 -61791907 - L1MA5 LINE L1 0 6300 5685 2306 132 15 46 chr18 24885643 24886038 -61791510 + L1PA16 LINE L1 5710 6092 -74 2145 80 25 7 chr18 24886909 24887220 -61790328 + AluY SINE Alu 1 316 0 418 284 60 9 chr18 24887435 24887551 -61789997 - L2 LINE L2 -5 3267 3146 234 62 0 0 chr18 24887567 24887599 -61789949 + (CA)n Simple_repeat Simple_repeat 2 33 0 257 333 6 42 chr18 24888014 24888182 -61789366 + CT-rich Low_complexity Low_complexity 5 166 0 325 298 213 28 chr18 24888336 24888689 -61788859 + L2 LINE L2 2854 3271 -1 2166 134 0 0 chr18 24889676 24889982 -61787566 + AluSg SINE Alu 1 306 -4 1135 190 8 45 chr18 24891145 24891392 -61786156 + L1MB7 LINE L1 5946 6183 -1 2129 91 70 0 chr18 24891427 24891714 -61785834 + AluSx SINE Alu 1 307 -5 215 271 16 90 chr18 24891776 24891898 -61785650 - L2 LINE L2 -1 3312 3200 408 298 122 41 chr18 24891968 24892338 -61785210 - L2 LINE L2 -209 3104 2714 468 0 0 0 chr18 24893127 24893179 -61784369 + (TG)n Simple_repeat Simple_repeat 2 53 0 285 86 0 0 chr18 24893208 24893243 -61784305 + U2 snRNA snRNA 1 35 -153 22 88 0 0 chr18 24894056 24894113 -61783435 + AT_rich Low_complexity Low_complexity 1 57 0 416 247 89 38 chr18 24894487 24894645 -61782903 - L1ME LINE L1 -436 5685 5520 1444 169 37 55 chr18 24894706 24894978 -61782570 + AluJo SINE Alu 1 267 -45 372 298 67 58 chr18 24895431 24895656 -61781892 - L2 LINE L2 -2 3270 3044 400 223 170 18 chr18 24896779 24896891 -61780657 - L2 LINE L2 0 3313 3185 316 205 63 15 chr18 24896902 24896999 -61780549 - MIR SINE MIR -71 137 37 879 157 8 0 chr18 24897498 24897632 -61779916 + AluJo SINE Alu 1 135 -177 1695 206 13 0 chr18 24897632 24897938 -61779610 + AluJo SINE Alu 1 310 -2 615 178 14 14 chr18 24897947 24898093 -61779455 + GA-rich Low_complexity Low_complexity 3 148 0 959 288 112 29 chr18 24898922 24899307 -61778241 + L3 LINE CR1 307 723 -854 1778 244 58 19 chr18 24899310 24899887 -61777661 - LTR48B LTR ERV1 -3 641 1 830 325 152 20 chr18 24899903 24900546 -61777002 + L3 LINE CR1 736 1463 -114 2528 79 0 0 chr18 24900965 24901268 -61776280 + AluSq SINE Alu 1 303 -10 34 24 0 0 chr18 24901301 24901342 -61776206 + AT_rich Low_complexity Low_complexity 1 41 0 231 257 114 29 chr18 24901349 24901454 -61776094 + L1ME4a LINE L1 6007 6120 -1 1443 118 0 48 chr18 24901729 24901958 -61775590 + AluSg/x SINE Alu 83 300 -10 291 236 76 83 chr18 24902028 24902185 -61775363 + L2 LINE L2 3103 3258 -14 600 100 0 0 chr18 24902463 24902543 -61775005 + MADE1 DNA Mariner 1 80 0 490 279 127 5 chr18 24902815 24903012 -61774536 + MIR SINE MIR 42 262 0 2771 235 39 48 chr18 24903683 24904398 -61773150 - L1M4 LINE L1 -2554 3592 2885 2229 125 0 0 chr18 24904398 24904710 -61772838 + AluSx SINE Alu 1 312 0 2771 235 39 48 chr18 24904710 24904913 -61772635 - L1M4 LINE L1 -3261 2885 2682 240 287 0 17 chr18 24905447 24905562 -61771986 + L1MEc LINE L1 987 1099 -5297 318 284 256 0 chr18 24905831 24906007 -61771541 - MIR SINE MIR -29 233 13 272 295 238 10 chr18 24906147 24906340 -61771208 - MIR SINE MIR -6 256 20 440 353 0 0 chr18 24906517 24906653 -61770895 + MIR3 SINE MIR 41 176 -32 2303 124 5 43 chr18 24908182 24908402 -61769146 - MER46B DNA MER2_type -2495 236 9 264 59 0 0 chr18 24908402 24908436 -61769112 + (TG)n Simple_repeat Simple_repeat 1 34 0 1841 151 11 11 chr18 24908436 24908715 -61768833 - AluSx SINE Alu -33 279 1 2303 124 5 43 chr18 24908715 24908864 -61768684 - MER46B DNA MER2_type -2720 11 5 389 320 121 34 chr18 24909117 24909323 -61768225 + MIR SINE MIR 2 225 -37 1347 52 0 0 chr18 24910185 24910338 -61767210 - AluSx SINE Alu -159 153 1 1805 147 9 50 chr18 24910385 24910704 -61766844 + AluJo SINE Alu 1 306 -6 252 307 88 15 chr18 24911584 24911721 -61765827 + L1ME4a LINE L1 5975 6121 0 822 90 49 0 chr18 24911850 24911972 -61765576 - L1PA6 LINE L1 -1 6153 6026 230 208 0 0 chr18 24912703 24912751 -61764797 + Alu SINE Alu 233 280 -22 207 139 0 0 chr18 24912786 24912822 -61764726 + (A)n Simple_repeat Simple_repeat 1 36 0 32 26 0 0 chr18 24914092 24914131 -61763417 + AT_rich Low_complexity Low_complexity 1 39 0 1794 166 14 0 chr18 24914131 24914409 -61763139 - AluJo SINE Alu -30 282 1 21 0 0 0 chr18 24914782 24914803 -61762745 + AT_rich Low_complexity Low_complexity 1 21 0 240 214 0 0 chr18 24914951 24915007 -61762541 + CT-rich Low_complexity Low_complexity 1 56 0 355 237 21 62 chr18 24915485 24915582 -61761966 - L2 LINE L2 0 3272 3180 2505 76 0 0 chr18 24916599 24916902 -61760646 + AluY SINE Alu 7 309 -2 691 141 0 0 chr18 24917007 24917106 -61760442 - Tigger7 DNA MER2_type 0 2487 2389 * 1408 171 51 16 chr18 24917104 24917361 -61760187 - Tigger7 DNA MER2_type -284 266 1 764 216 122 14 chr18 24918530 24918743 -61758805 + MIR SINE MIR 5 240 -22 226 234 0 0 chr18 24918991 24919038 -61758510 + L1ME LINE L1 5674 5720 -450 22 0 0 0 chr18 24919186 24919208 -61758340 + AT_rich Low_complexity Low_complexity 1 22 0 182 271 17 0 chr18 24919450 24919509 -61758039 - L2 LINE L2 -262 3010 2951 580 245 166 11 chr18 24919718 24919983 -61757565 + MER5C DNA MER1_type 18 323 -1 27 29 0 0 chr18 24920091 24920125 -61757423 + AT_rich Low_complexity Low_complexity 1 34 0 395 211 46 23 chr18 24920125 24920300 -61757248 + (TA)n Simple_repeat Simple_repeat 2 180 0 382 183 30 0 chr18 24920314 24920483 -61757065 + (TA)n Simple_repeat Simple_repeat 1 174 0 979 209 0 0 chr18 24920484 24920642 -61756906 - FRAM SINE Alu -8 158 1 201 329 68 14 chr18 24920671 24920744 -61756804 - MIR SINE MIR -25 237 161 189 107 0 0 chr18 24920753 24920781 -61756767 + (TTA)n Simple_repeat Simple_repeat 2 29 0 346 56 111 0 chr18 24922205 24922259 -61755289 + L1MB3 LINE L1 6095 6154 -29 191 329 14 41 chr18 24922288 24922361 -61755187 - L2 LINE L2 -93 3179 3109 24 0 0 0 chr18 24923229 24923253 -61754295 + AT_rich Low_complexity Low_complexity 1 24 0 786 194 222 19 chr18 24923336 24923552 -61753996 - MIR SINE MIR -1 261 2 2249 123 0 0 chr18 24924079 24924418 -61753130 + AluSx SINE Alu 12 350 0 5853 123 32 30 chr18 24925212 24926598 -61750950 - L1PA15 LINE L1 0 6165 4795 228 342 13 38 chr18 24929036 24929194 -61748354 - MIR SINE MIR -1 261 108 266 311 0 0 chr18 24930928 24931002 -61746546 - MIR3 SINE MIR -27 181 108 21 0 0 0 chr18 24931002 24931023 -61746525 + AT_rich Low_complexity Low_complexity 1 21 0 273 321 12 0 chr18 24931166 24931247 -61746301 - L2 LINE L2 0 3313 3232 656 337 100 6 chr18 24931555 24932024 -61745524 - L2 LINE L2 -557 2757 2245 821 128 60 0 chr18 24932375 24932492 -61745056 - FLAM_C SINE Alu -17 126 3 2045 130 3 7 chr18 24932499 24932798 -61744750 - AluSx SINE Alu -14 298 1 2332 104 7 0 chr18 24932880 24933189 -61744359 - AluSq SINE Alu -2 311 1 761 229 85 0 chr18 24934273 24934474 -61743074 + MIR SINE MIR 40 257 -5 192 40 0 0 chr18 24934511 24934536 -61743012 + (TAAAA)n Simple_repeat Simple_repeat 1 25 0 569 247 153 21 chr18 24935230 24935420 -61742128 - MIR SINE MIR -17 245 31 211 228 0 167 chr18 24935442 24935509 -61742039 - MIR SINE MIR -10 252 210 2073 128 10 0 chr18 24935509 24935815 -61741733 - AluSq SINE Alu -4 309 1 211 228 0 167 chr18 24935815 24935861 -61741687 - MIR SINE MIR -52 210 158 180 0 0 0 chr18 24937522 24937542 -61740006 + (CAG)n Simple_repeat Simple_repeat 3 22 0 205 203 0 17 chr18 24938785 24938812 -61738736 + A-rich Low_complexity Low_complexity 4 30 -31 1440 165 96 4 chr18 24938812 24939073 -61738475 + AluJo SINE Alu 1 285 -27 205 203 0 17 chr18 24939073 24939104 -61738444 + A-rich Low_complexity Low_complexity 30 61 0 680 252 0 0 chr18 24939722 24939861 -61737687 + FLAM_C SINE Alu 2 140 -3 27 0 0 0 chr18 24939863 24939890 -61737658 + AT_rich Low_complexity Low_complexity 1 27 0 1387 232 50 11 chr18 24939894 24940256 -61737292 + L1ME3A LINE L1 5764 6139 -31 1808 132 0 21 chr18 24941744 24942032 -61735516 - L1MA4 LINE L1 -11 6289 6008 594 223 65 7 chr18 24942682 24942821 -61734727 + MER5B DNA MER1_type 14 160 -18 253 273 262 38 chr18 24942986 24943169 -61734379 - MIR SINE MIR -19 243 20 280 369 76 31 chr18 24943429 24943784 -61733764 - L2 LINE L2 -726 2588 2218 1254 205 19 4 chr18 24943866 24944124 -61733424 + MIR SINE MIR 1 262 0 354 294 37 29 chr18 24944395 24944531 -61733017 - MIR SINE MIR -79 183 47 33 43 0 0 chr18 24944545 24944592 -61732956 + AT_rich Low_complexity Low_complexity 1 47 0 1819 25 5 0 chr18 24944592 24944794 -61732754 - L1PA5 LINE L1 -7 6147 5945 374 234 103 51 chr18 24944886 24945061 -61732487 + MLT1L LTR MaLR 172 355 -260 2409 86 0 6 chr18 24945430 24945744 -61731804 + AluSx SINE Alu 1 312 0 280 259 106 45 chr18 24946267 24946619 -61730929 - MLT1L LTR MaLR -8 607 172 487 331 12 38 chr18 24948409 24948729 -61728819 - LTR16B LTR ERVL 0 464 153 182 340 0 0 chr18 24948869 24948919 -61728629 + MIR SINE MIR 96 145 -63 2343 85 3 7 chr18 24949278 24949583 -61727965 - AluSg SINE Alu -6 304 1 21 0 0 0 chr18 24949670 24949691 -61727857 + GC_rich Low_complexity Low_complexity 1 21 0 247 211 0 19 chr18 24950513 24950565 -61726983 - L2 LINE L2 -1 3312 3262 191 400 0 0 chr18 24950747 24950827 -61726721 + L2 LINE L2 3234 3313 0 2162 79 9 63 chr18 24950928 24951243 -61726305 - AluSx SINE Alu -13 299 2 1698 148 10 30 chr18 24951514 24951817 -61725731 + L1MB2 LINE L1 5872 6168 -3 650 260 150 56 chr18 24952838 24953200 -61724348 - L2 LINE L2 -137 3176 2849 2443 85 7 0 chr18 24953200 24953505 -61724043 + AluSg SINE Alu 1 307 -3 650 260 150 56 chr18 24953505 24953914 -61723634 - L2 LINE L2 -464 2849 2290 873 262 124 15 chr18 24954967 24955371 -61722177 + MER113 DNA MER1_type? 3 450 -71 2578 56 0 3 chr18 24956155 24956459 -61721089 - AluY SINE Alu -8 303 1 2374 110 0 0 chr18 24956907 24957217 -61720331 - AluSx SINE Alu -2 310 1 223 306 132 0 chr18 24958721 24958842 -61718706 + MIR SINE MIR 50 186 -76 693 315 36 4 chr18 24960404 24960655 -61716893 + MIR SINE MIR 1 259 -3 262 351 92 6 chr18 24960997 24961171 -61716377 + MIR SINE MIR 23 211 -51 2323 125 0 0 chr18 24961677 24961989 -61715559 - AluSx SINE Alu 0 312 1 1868 162 3 7 chr18 24962468 24962771 -61714777 + AluJo SINE Alu 2 303 -9 25 0 0 0 chr18 24963309 24963334 -61714214 + AT_rich Low_complexity Low_complexity 1 25 0 220 286 48 0 chr18 24963573 24963636 -61713912 - L2 LINE L2 -68 3204 3139 376 248 154 0 chr18 24964144 24964293 -61713255 + L3 LINE CR1 1372 1543 -34 1826 126 0 11 chr18 24964527 24964788 -61712760 + AluJo SINE Alu 1 258 -54 471 292 55 62 chr18 24965973 24966230 -61711318 - L1ME LINE L1 -314 5807 5553 1741 180 3 0 chr18 24968097 24968381 -61709167 + AluJo SINE Alu 1 285 -27 1837 171 4 0 chr18 24968839 24969120 -61708428 + AluJo SINE Alu 1 282 -30 506 243 97 49 chr18 24969341 24969588 -61707960 + LTR16C LTR ERVL 233 491 0 312 299 62 13 chr18 24970280 24970516 -61707032 + L1P LINE L1 4924 5167 -979 312 292 99 31 chr18 24970598 24970790 -61706758 + L1ME LINE L1 5270 5474 -647 270 170 0 0 chr18 24970893 24970940 -61706608 + L1PA11 LINE L1 6125 6171 -3 2141 124 0 3 chr18 24971007 24971298 -61706250 + AluSx SINE Alu 1 290 -22 910 185 0 19 chr18 24971427 24971584 -61705964 + FRAM SINE Alu 2 155 -21 357 137 0 41 chr18 24972468 24972541 -61705007 - Alu SINE Alu 0 300 231 183 229 91 57 chr18 24972911 24973086 -61704462 - L2 LINE L2 -254 3018 2838 187 285 160 60 chr18 24973161 24973223 -61704325 - L2 LINE L2 -1391 1923 1869 3942 55 25 0 chr18 24973223 24973697 -61703851 + LTR2B LTR ERV1 1 486 -4 187 285 160 60 chr18 24973697 24974185 -61703363 - L2 LINE L2 -1445 1869 1318 337 274 115 19 chr18 24974439 24974596 -61702952 - MER5B DNA MER1_type 0 178 7 498 88 0 0 chr18 24974679 24974747 -61702801 + AluJ/FLAM SINE Alu 2 69 -243 2305 101 0 3 chr18 24974772 24975068 -61702480 + AluSx SINE Alu 1 295 -17 234 0 0 0 chr18 24975423 24975449 -61702099 + (CA)n Simple_repeat Simple_repeat 2 27 0 212 0 0 35 chr18 24976585 24976614 -61700934 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 289 267 75 17 chr18 24978237 24978357 -61699191 - MIR SINE MIR -12 250 124 2712 199 15 9 chr18 24978418 24978947 -61698601 + MER74A LTR ERVL 26 557 -1 1710 189 7 0 chr18 24979162 24979458 -61698090 - AluJo SINE Alu -14 298 1 2409 105 0 0 chr18 24979654 24979960 -61697588 - AluSx SINE Alu -6 306 1 784 325 94 9 chr18 24980728 24981153 -61696395 + L2 LINE L2 2267 2727 -587 21602 129 8 3 chr18 24981720 24985930 -61691618 - L1PA10 LINE L1 -5 6163 1931 812 182 0 0 chr18 24986071 24986203 -61691345 + AluJb SINE Alu 135 266 -46 188 317 118 19 chr18 24986259 24986420 -61691128 + L2 LINE L2 2852 3028 -285 265 290 63 54 chr18 24986437 24986658 -61690890 - MLT1J LTR MaLR -2 509 287 309 312 96 35 chr18 24986759 24986958 -61690590 - MLT1L LTR MaLR -359 256 46 822 215 12 72 chr18 24986961 24987212 -61690336 + AluSx SINE Alu 1 236 -76 1200 148 11 0 chr18 24987329 24987511 -61690037 + AluSg/x SINE Alu 121 304 -8 338 243 0 63 chr18 24987638 24987749 -61689799 + L2 LINE L2 3158 3261 -52 248 333 63 17 chr18 24987818 24987992 -61689556 - MIR SINE MIR -47 215 34 332 296 87 85 chr18 24988110 24988331 -61689217 + LTR16C LTR ERVL 111 335 -156 2141 177 60 27 chr18 24988331 24988816 -61688732 + MLT1D LTR MaLR 5 505 0 332 296 87 85 chr18 24988816 24988972 -61688576 + LTR16C LTR ERVL 335 489 -2 2170 104 7 3 chr18 24989399 24989686 -61687862 + AluSx SINE Alu 1 288 -24 341 284 11 11 chr18 24990679 24990774 -61686774 + GA-rich Low_complexity Low_complexity 4 98 0 258 297 62 16 chr18 24991196 24991388 -61686160 + L2 LINE L2 2954 3154 -159 2225 131 0 0 chr18 24992188 24992494 -61685054 + AluSx SINE Alu 1 306 -6 698 198 180 5 chr18 24992820 24993042 -61684506 + MIR SINE MIR 2 262 0 1836 171 77 3 chr18 24993447 24993787 -61683761 - MLT1A1 LTR MaLR 0 365 1 1782 138 34 13 chr18 24994310 24994608 -61682940 + THE1C LTR MaLR 72 375 0 2059 241 19 29 chr18 24994627 24995013 -61682535 + L1ME1 LINE L1 418 840 -5556 1456 220 57 14 chr18 24995013 24995363 -61682185 + MLT1A1 LTR MaLR 1 365 0 2059 241 19 29 chr18 24995363 24995695 -61681853 + L1ME1 LINE L1 840 1174 -5222 2211 190 51 43 chr18 24995701 24996169 -61681379 - MLT2B3 LTR ERVL -4 550 79 437 155 0 0 chr18 24996270 24996341 -61681207 - MLT2B3 LTR ERVL -483 71 1 226 238 89 30 chr18 24996365 24996466 -61681082 + L1ME1 LINE L1 1193 1299 -5097 951 104 0 0 chr18 24996467 24996592 -61680956 + AluSg/x SINE Alu 176 300 -12 446 282 44 51 chr18 24996611 24996905 -61680643 + L1ME1 LINE L1 1289 1580 -4816 363 202 60 0 chr18 24996905 24996989 -61680559 + L1 LINE L1 3631 3719 -2427 * 1691 218 56 24 chr18 24996987 24997488 -61680060 + L1ME1 LINE L1 4259 4775 -1440 1391 167 4 0 chr18 24997489 24997716 -61679832 + AluJo SINE Alu 83 310 -2 3326 215 53 15 chr18 24997716 24999117 -61678431 + L1ME1 LINE L1 4773 6227 -8 4086 97 24 2 chr18 25000081 25000671 -61676877 + L1MA2 LINE L1 5702 6304 0 24 0 0 0 chr18 25000671 25000695 -61676853 + AT_rich Low_complexity Low_complexity 1 24 0 282 248 239 18 chr18 25000845 25000954 -61676594 - L2 LINE L2 -2 3270 3138 370 62 250 0 chr18 25002433 25002497 -61675051 + MADE1 DNA Mariner 1 80 0 411 226 85 0 chr18 25003368 25003474 -61674074 - MER5B DNA MER1_type -14 164 50 33 0 0 0 chr18 25003477 25003510 -61674038 + AT_rich Low_complexity Low_complexity 1 33 0 1305 169 159 60 chr18 25003565 25003766 -61673782 - L1MD2 LINE L1 -216 6143 5963 1987 146 0 7 chr18 25003766 25004054 -61673494 + AluSx SINE Alu 1 286 -26 1305 169 159 60 chr18 25004054 25004247 -61673301 - L1MD2 LINE L1 -396 5963 5675 1310 139 5 19 chr18 25004247 25004455 -61673093 + AluJo SINE Alu 83 287 -25 2312 118 27 13 chr18 25004463 25004837 -61672711 - L1MD2 LINE L1 -673 5686 5308 225 224 0 0 chr18 25004877 25004926 -61672622 - MER5B DNA MER1_type -129 49 1 366 250 50 36 chr18 25005192 25005332 -61672216 + MER5A DNA MER1_type 45 186 -3 2245 114 0 7 chr18 25005408 25005707 -61671841 + AluSc SINE Alu 1 297 -12 813 188 0 0 chr18 25005715 25005848 -61671700 + AluJo SINE Alu 1 133 -169 2287 118 0 3 chr18 25005849 25006306 -61671242 + AluSx SINE Alu 1 456 0 1076 169 12 0 chr18 25006312 25006484 -61671064 + AluJo SINE Alu 139 312 0 394 294 129 0 chr18 25006637 25006807 -61670741 - MIR SINE MIR -4 258 67 22 0 0 0 chr18 25006864 25006886 -61670662 + AT_rich Low_complexity Low_complexity 1 22 0 1844 136 55 4 chr18 25006922 25007195 -61670353 + AluSx SINE Alu 1 287 -25 31 44 0 0 chr18 25007195 25007240 -61670308 + AT_rich Low_complexity Low_complexity 1 45 0 428 245 0 10 chr18 25008452 25008554 -61668994 - LTR67 LTR ERVL -1 556 456 1797 166 8 75 chr18 25008750 25009136 -61668412 + MLT1B LTR MaLR 23 382 -8 266 341 40 29 chr18 25009179 25009238 -61668310 - MIR SINE MIR -7 255 198 867 174 16 49 chr18 25009238 25009422 -61668126 + MER45A DNA AcHobo 1 178 0 266 341 40 29 chr18 25009422 25009535 -61668013 - MIR SINE MIR -64 198 81 1771 15 0 10 chr18 25010404 25010602 -61666946 - AluY SINE Alu -10 301 106 322 272 110 0 chr18 25010697 25010833 -61666715 + MLT1K LTR MaLR 106 256 -332 434 188 116 9 chr18 25011154 25011266 -61666282 + MER20B DNA MER1_type 49 172 -611 261 305 162 36 chr18 25011279 25011446 -61666102 + MLT1K LTR MaLR 394 581 -7 487 276 130 67 chr18 25011676 25012092 -61665456 + L2 LINE L2 2826 3267 -5 1615 191 0 17 chr18 25012332 25012626 -61664922 - AluJo SINE Alu -18 294 6 202 301 27 0 chr18 25013458 25013531 -61664017 - MER5A DNA MER1_type -1 188 114 * 235 286 14 14 chr18 25013479 25013549 -61663999 + MER5A DNA MER1_type 36 105 -84 404 286 97 17 chr18 25013734 25013909 -61663639 + MIR SINE MIR 48 236 -26 22 35 0 0 chr18 25013957 25013986 -61663562 + AT_rich Low_complexity Low_complexity 1 29 0 484 96 15 178 chr18 25014074 25014144 -61663404 - L1MB7 LINE L1 0 6184 6145 1418 165 43 50 chr18 25014144 25014447 -61663101 + AluJo SINE Alu 1 301 -11 484 96 15 178 chr18 25014447 25014511 -61663037 - L1MB7 LINE L1 -39 6145 6072 408 82 0 0 chr18 25014800 25014861 -61662687 + (CA)n Simple_repeat Simple_repeat 1 61 0 679 294 130 47 chr18 25014869 25015313 -61662235 - L2 LINE L2 -35 3278 2767 2057 148 0 0 chr18 25015313 25015611 -61661937 + AluSx SINE Alu 1 298 -14 679 294 130 47 chr18 25015611 25015846 -61661702 - L2 LINE L2 -546 2767 2553 1999 150 31 0 chr18 25016207 25016501 -61661047 - AluJb SINE Alu -9 303 1 2217 117 0 0 chr18 25017581 25017879 -61659669 - AluSx SINE Alu -12 300 3 363 293 18 10 chr18 25018194 25018323 -61659225 - MIR SINE MIR -62 146 31 3918 141 0 28 chr18 25018769 25019414 -61658134 + L1PA13 LINE L1 5533 6159 -4 2141 156 49 3 chr18 25020253 25020638 -61656910 - MER57A LTR ERV1 0 403 1 1978 151 3 3 chr18 25020962 25021254 -61656294 + AluJb SINE Alu 1 292 -20 658 299 84 60 chr18 25021370 25021835 -61655713 + MLT1K LTR MaLR 96 571 -17 228 250 0 0 chr18 25021980 25022028 -61655520 + CT-rich Low_complexity Low_complexity 1 48 0 1766 258 122 9 chr18 25023012 25023048 -61654500 + Zaphod DNA AcHobo 38 69 -3962 330 26 0 0 chr18 25023048 25023087 -61654461 + (CA)n Simple_repeat Simple_repeat 2 40 0 1766 258 122 9 chr18 25023087 25023574 -61653974 + Zaphod DNA AcHobo 69 620 -3411 2156 226 147 1 chr18 25023577 25024232 -61653316 + Zaphod DNA AcHobo 3279 4028 -3 22 88 0 0 chr18 25024841 25024898 -61652650 + GC_rich Low_complexity Low_complexity 1 57 0 321 118 0 0 chr18 25024913 25024964 -61652584 + (TCCCC)n Simple_repeat Simple_repeat 2 52 0 21 36 0 0 chr18 25024991 25025019 -61652529 + GC_rich Low_complexity Low_complexity 1 28 0 270 180 33 0 chr18 25025083 25025144 -61652404 + (CGG)n Simple_repeat Simple_repeat 3 65 0 29 0 0 0 chr18 25025458 25025487 -61652061 + GC_rich Low_complexity Low_complexity 1 29 0 315 284 136 19 chr18 25027480 25027642 -61649906 + MIR SINE MIR 22 202 -60 1199 197 28 0 chr18 25029859 25030077 -61647471 + MER58A DNA MER1_type 1 224 0 1934 150 72 0 chr18 25030684 25031004 -61646544 + MER2 DNA MER2_type 2 344 0 910 113 0 0 chr18 25031734 25031858 -61645690 - AluSg/x SINE Alu -3 309 186 1010 128 0 0 chr18 25032298 25032439 -61645109 - MER2 DNA MER2_type -203 142 2 268 311 61 22 chr18 25032543 25032723 -61644825 - MIR SINE MIR -70 192 6 676 176 176 55 chr18 25033968 25034128 -61643420 - MER20B DNA MER1_type 0 783 644 678 58 0 0 chr18 25034128 25034215 -61643333 + (TA)n Simple_repeat Simple_repeat 2 88 0 2233 109 3 0 chr18 25034215 25034508 -61643040 - AluSg SINE Alu -16 294 1 676 176 176 55 chr18 25034508 25034584 -61642964 - MER20B DNA MER1_type -138 645 517 1938 154 13 0 chr18 25035060 25035366 -61642182 - AluSx SINE Alu -2 310 1 647 274 110 2 chr18 25035563 25035918 -61641630 - MER20B DNA MER1_type -289 494 35 2102 90 72 0 chr18 25037207 25037485 -61640063 + AluSx SINE Alu 1 298 -14 1873 130 33 30 chr18 25037757 25038056 -61639492 - AluJo SINE Alu -12 300 1 2396 104 0 0 chr18 25038908 25039216 -61638332 - AluSx SINE Alu 0 312 5 2091 110 4 0 chr18 25039289 25039589 -61637959 - AluSx SINE Alu 0 311 11 3844 113 15 9 chr18 25039707 25040290 -61637258 - L1PB1 LINE L1 -1 6150 5564 2071 104 34 14 chr18 25040846 25041143 -61636405 - AluSx SINE Alu -9 303 1 1800 150 0 45 chr18 25041143 25041455 -61636093 - AluSx SINE Alu -13 299 1 270 302 79 64 chr18 25041745 25041969 -61635579 + L2 LINE L2 2513 2745 -569 1866 215 23 46 chr18 25041969 25042486 -61635062 + MLT1D LTR MaLR 1 505 0 270 302 79 64 chr18 25042486 25042589 -61634959 + L2 LINE L2 2745 2845 -469 2473 117 6 0 chr18 25042604 25042962 -61634586 - MER46B DNA MER2_type -1 235 1 1861 167 0 0 chr18 25043168 25043476 -61634072 + AluSx SINE Alu 1 308 0 187 310 23 11 chr18 25043626 25043713 -61633835 + L2 LINE L2 2974 3061 -211 3868 196 93 9 chr18 25043779 25044670 -61632878 + Tigger6a DNA MER2_type 1 966 -117 5717 171 51 14 chr18 25044670 25045228 -61632320 - L1MB3 LINE L1 -5 6178 5642 1526 208 13 10 chr18 25045228 25045536 -61632012 - AluJo SINE Alu -3 309 1 5717 171 51 14 chr18 25045536 25046822 -61630726 - L1MB3 LINE L1 -541 5642 4240 1956 162 0 7 chr18 25046822 25047131 -61630417 - AluJo SINE Alu -5 307 1 5717 171 51 14 chr18 25047131 25047363 -61630185 - L1MB3 LINE L1 -1943 4240 4018 632 211 7 14 chr18 25047363 25047505 -61630043 + Tigger6a DNA MER2_type 943 1083 0 389 246 144 0 chr18 25047517 25047635 -61629913 + L2 LINE L2 3177 3311 -2 205 376 37 18 chr18 25048346 25048455 -61629093 - L2 LINE L2 -17 3255 3145 2194 134 0 0 chr18 25048475 25048781 -61628767 - AluJb SINE Alu -6 306 1 1482 214 30 63 chr18 25048838 25049236 -61628312 - MLT1B LTR MaLR -2 388 4 362 239 104 15 chr18 25049297 25049431 -61628117 - MIR SINE MIR -70 192 47 795 145 0 0 chr18 25049688 25049829 -61627719 - FLAM_C SINE Alu 0 142 2 26 30 0 0 chr18 25050773 25050806 -61626742 + AT_rich Low_complexity Low_complexity 1 33 0 316 295 126 73 chr18 25052191 25052442 -61625106 - L1ME3A LINE L1 -197 5973 5698 2159 126 27 21 chr18 25052442 25052776 -61624772 - MER1B DNA MER1_type -1 336 1 316 295 126 73 chr18 25052776 25052866 -61624682 - L1ME3A LINE L1 -472 5698 5614 979 181 0 6 chr18 25053413 25053573 -61623975 + FRAM SINE Alu 1 159 -7 387 41 0 0 chr18 25054241 25054290 -61623258 + (TG)n Simple_repeat Simple_repeat 2 50 0 288 221 26 115 chr18 25055117 25055186 -61622362 + MER5A DNA MER1_type 10 67 -122 1984 122 0 23 chr18 25055186 25055490 -61622058 + AluSx SINE Alu 1 297 -15 288 221 26 115 chr18 25055490 25055533 -61622015 + MER5A DNA MER1_type 67 112 -77 24 32 0 0 chr18 25055616 25055647 -61621901 + AT_rich Low_complexity Low_complexity 1 31 0 200 252 262 10 chr18 25055765 25055868 -61621680 + L2 LINE L2 3136 3264 -8 324 0 0 0 chr18 25056099 25056135 -61621413 + (TA)n Simple_repeat Simple_repeat 2 37 0 2474 80 0 6 chr18 25056135 25056446 -61621102 - AluY SINE Alu -2 309 1 216 393 65 5 chr18 25056538 25056739 -61620809 - MIR SINE MIR -30 232 20 412 332 188 4 chr18 25056771 25057021 -61620527 - L1ME LINE L1 -298 5823 5528 2246 113 3 0 chr18 25057299 25057601 -61619947 - AluSx SINE Alu -9 303 1 219 187 13 27 chr18 25057751 25057826 -61619722 + CT-rich Low_complexity Low_complexity 3 76 0 599 109 33 0 chr18 25058068 25058160 -61619388 + L1MA3 LINE L1 6211 6305 0 21 0 0 0 chr18 25058581 25058602 -61618946 + AT_rich Low_complexity Low_complexity 1 21 0 269 245 0 0 chr18 25059485 25059538 -61618010 - L2 LINE L2 -5 3267 3215 181 309 0 59 chr18 25059690 25059758 -61617790 - L2 LINE L2 0 3313 3250 2032 151 20 0 chr18 25060496 25060795 -61616753 + AluJb SINE Alu 1 305 -7 2222 116 3 3 chr18 25060798 25061099 -61616449 + AluSq SINE Alu 1 301 -12 397 320 120 0 chr18 25062083 25062258 -61615290 - L2 LINE L2 -5 3308 3113 304 331 35 21 chr18 25062470 25062615 -61614933 + L2 LINE L2 3126 3272 0 4988 147 31 14 chr18 25064935 25066048 -61611500 - L1MB3 LINE L1 -1 6182 5049 899 141 0 0 chr18 25067064 25067192 -61610356 - FLAM_C SINE Alu -5 128 1 709 276 12 32 chr18 25067192 25067532 -61610016 - L1MC5 LINE L1 -26 7935 7603 1253 267 91 57 chr18 25067586 25068000 -61609548 - L1ME3 LINE L1 -63 6099 5701 3680 112 4 6 chr18 25068000 25068535 -61609013 + L1PA15 LINE L1 5621 6154 -11 1253 267 91 57 chr18 25068535 25068582 -61608966 - L1ME3 LINE L1 -461 5701 5657 1945 137 25 0 chr18 25068582 25068867 -61608681 + AluSx SINE Alu 1 292 -20 1253 267 91 57 chr18 25068867 25069321 -61608227 - L1ME3 LINE L1 -505 5657 5149 246 232 0 0 chr18 25069347 25069416 -61608132 - L1ME3 LINE L1 -1433 4713 4645 5049 101 7 8 chr18 25069435 25069961 -61607587 - L1PA13 LINE L1 -19 6144 5618 2132 101 67 48 chr18 25069961 25070318 -61607230 - THE1B LTR MaLR 0 364 1 5049 101 7 8 chr18 25070318 25070516 -61607032 - L1PA13 LINE L1 -545 5618 5421 2258 86 33 3 chr18 25070517 25070818 -61606730 - AluSx SINE Alu -2 310 1 22 0 0 0 chr18 25071437 25071459 -61606089 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr18 25071804 25071827 -61605721 + (A)n Simple_repeat Simple_repeat 1 23 0 2003 132 3 3 chr18 25071832 25072127 -61605421 + AluSx SINE Alu 1 295 -17 237 297 33 22 chr18 25073018 25073109 -61604439 + L1MC/D LINE L1 5602 5693 -2115 2056 134 0 3 chr18 25073725 25074024 -61603524 - AluSx SINE Alu -14 298 1 186 71 0 0 chr18 25076187 25076215 -61601333 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 263 304 35 9 chr18 25077448 25077563 -61599985 + L2 LINE L2 2491 2608 -706 1747 153 35 66 chr18 25077609 25077956 -61599592 + MER1B DNA MER1_type 2 337 0 236 305 207 11 chr18 25078357 25078531 -61599017 - MIR SINE MIR -2 260 53 2006 110 7 0 chr18 25080773 25081046 -61596502 + AluSx SINE Alu 1 275 -37 216 0 0 0 chr18 25081048 25081072 -61596476 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 2036 130 3 3 chr18 25081137 25081437 -61596111 - AluSg SINE Alu -10 300 1 378 227 165 0 chr18 25081480 25081577 -61595971 - L2 LINE L2 0 3272 3160 2076 130 0 10 chr18 25082506 25082807 -61594741 - AluSx SINE Alu -14 298 1 1856 134 41 21 chr18 25083740 25084030 -61593518 - AluJo SINE Alu -16 296 1 272 381 58 45 chr18 25084195 25084350 -61593198 - L2 LINE L2 -17 3255 3099 886 57 81 0 chr18 25084539 25084663 -61592885 - MER85 DNA T2_type 0 139 6 6307 50 1 0 chr18 25084747 25085523 -61592025 + L1PA5 LINE L1 5378 6154 0 1886 152 3 34 chr18 25085604 25085926 -61591622 + AluJb SINE Alu 1 312 0 2021 93 0 11 chr18 25086223 25086491 -61591057 - AluSq SINE Alu -48 265 1 268 299 15 30 chr18 25087738 25087872 -61589676 + L2 LINE L2 3160 3291 -22 215 324 93 28 chr18 25088179 25088287 -61589261 + L2 LINE L2 3199 3313 0 376 237 97 0 chr18 25088533 25088626 -61588922 - MER68 LTR ERV1 -4 558 457 2109 178 45 20 chr18 25088732 25089176 -61588372 - MER68 LTR ERV1 -107 455 1 2047 166 0 0 chr18 25090006 25090313 -61587235 - AluJb SINE Alu -5 307 1 199 285 114 32 chr18 25090492 25090615 -61586933 - L2 LINE L2 0 3313 3181 1094 79 13 40 chr18 25092227 25092379 -61585169 - AluSg/x SINE Alu -10 299 152 24 32 0 0 chr18 25092580 25092611 -61584937 + AT_rich Low_complexity Low_complexity 1 31 0 358 312 112 24 chr18 25093737 25093942 -61583606 - MIR SINE MIR -11 251 29 2252 114 0 3 chr18 25094413 25094719 -61582829 + AluSx SINE Alu 1 305 -7 1881 139 3 29 chr18 25094866 25095176 -61582372 - AluJo SINE Alu -10 302 1 1891 89 0 0 chr18 25097794 25098029 -61579519 - AluSg/x SINE Alu -10 302 68 204 271 0 0 chr18 25098131 25098179 -61579369 + L2 LINE L2 3225 3272 0 255 228 59 20 chr18 25098224 25098325 -61579223 - MARNA DNA Mariner -336 250 146 * 342 238 203 7 chr18 25098283 25098426 -61579122 + MARNA DNA Mariner 399 569 -17 1106 200 85 80 chr18 25100673 25101009 -61576539 + L1MB8 LINE L1 4504 4844 -1302 2368 104 0 0 chr18 25101009 25101318 -61576230 - AluSx SINE Alu -3 309 1 1106 200 85 80 chr18 25101318 25101381 -61576167 + L1MB8 LINE L1 4844 4905 -1241 1447 193 41 4 chr18 25101381 25101650 -61575898 + AluJb SINE Alu 1 279 -33 2789 169 114 52 chr18 25101650 25102019 -61575529 + L1MB8 LINE L1 4916 5260 -918 2489 82 0 13 chr18 25102019 25102334 -61575214 + AluY SINE Alu 1 311 0 2789 169 114 52 chr18 25102334 25103012 -61574536 + L1MB8 LINE L1 5260 6056 -122 1179 188 78 0 chr18 25103015 25103233 -61574315 + AluJb SINE Alu 1 235 -77 430 182 7 84 chr18 25103262 25103405 -61574143 + L1MB7 LINE L1 6052 6183 -1 2526 57 0 0 chr18 25103410 25103707 -61573841 + AluY SINE Alu 1 297 -14 11510 116 12 7 chr18 25103809 25105629 -61571919 - Tigger1 DNA MER2_type 0 2418 581 2216 127 0 0 chr18 25105629 25105936 -61571612 + AluSq SINE Alu 1 307 -6 11510 116 12 7 chr18 25105936 25106498 -61571050 - Tigger1 DNA MER2_type -1837 581 23 8807 106 42 6 chr18 25106977 25108228 -61569320 - HSMAR2 DNA Mariner -2 1300 5 29 0 0 0 chr18 25108267 25108296 -61569252 + AT_rich Low_complexity Low_complexity 1 29 0 643 199 3 38 chr18 25108570 25108839 -61568709 + CT-rich Low_complexity Low_complexity 1 259 0 2150 125 3 0 chr18 25108840 25109144 -61568404 - AluSx SINE Alu -7 305 1 279 0 0 0 chr18 25109218 25109249 -61568299 + (TG)n Simple_repeat Simple_repeat 2 32 0 376 123 27 0 chr18 25109249 25109322 -61568226 + (TA)n Simple_repeat Simple_repeat 1 75 0 339 25 0 0 chr18 25109326 25109366 -61568182 + (TG)n Simple_repeat Simple_repeat 2 41 0 1737 176 50 9 chr18 25109370 25109710 -61567838 - MLT1A1 LTR MaLR -11 354 1 343 280 120 27 chr18 25110537 25110762 -61566786 + MIR SINE MIR 16 261 -1 282 282 0 14 chr18 25110855 25110926 -61566622 + MIR3 SINE MIR 9 78 -130 261 194 71 82 chr18 25111154 25111252 -61566296 + MER103 DNA DNA 68 164 -2 195 321 0 36 chr18 25111306 25111362 -61566186 + L3 LINE CR1 1516 1569 -8 590 112 0 0 chr18 25111362 25111451 -61566097 + L1MB7 LINE L1 6087 6175 -9 24 32 0 0 chr18 25111505 25111536 -61566012 + AT_rich Low_complexity Low_complexity 1 31 0 708 154 16 8 chr18 25111538 25111661 -61565887 + AluJo/FLAM SINE Alu 1 124 -178 1002 81 0 0 chr18 25111661 25111784 -61565764 + AluSc SINE Alu 171 293 -16 183 200 75 0 chr18 25112221 25112261 -61565287 + MIR SINE MIR 107 149 -59 1830 141 28 3 chr18 25113039 25113330 -61564218 + AluJb SINE Alu 1 298 -14 887 275 131 45 chr18 25113912 25114144 -61563404 + L2 LINE L2 2553 2764 -549 2290 113 0 0 chr18 25114144 25114444 -61563104 - AluSx SINE Alu -12 300 1 887 275 131 45 chr18 25114444 25114888 -61562660 + L2 LINE L2 2764 3278 -35 408 82 0 0 chr18 25114896 25114957 -61562591 + (TG)n Simple_repeat Simple_repeat 1 61 0 222 191 0 0 chr18 25115703 25115750 -61561798 + (CA)n Simple_repeat Simple_repeat 1 47 0 2254 173 63 20 chr18 25115965 25116411 -61561137 - MLT1C LTR MaLR 0 467 3 2128 109 24 0 chr18 25116904 25117197 -61560351 - AluSx SINE Alu -11 301 2 237 65 0 0 chr18 25117500 25117531 -61560017 + (CA)n Simple_repeat Simple_repeat 2 32 0 2271 134 32 24 chr18 25117598 25117970 -61559578 + THE1C LTR MaLR 1 375 0 1204 139 10 24 chr18 25117979 25118188 -61559360 - AluJb SINE Alu -20 292 87 1418 135 106 66 chr18 25119270 25119544 -61558004 + AluJo SINE Alu 1 285 -27 23 68 0 0 chr18 25119544 25119588 -61557960 + AT_rich Low_complexity Low_complexity 1 44 0 2050 118 0 20 chr18 25119935 25120231 -61557317 + AluSx SINE Alu 1 290 -22 313 307 96 46 chr18 25120236 25120539 -61557009 + L1M4 LINE L1 3731 4048 -2098 237 315 54 0 chr18 25120752 25120882 -61556666 + L1P LINE L1 4299 4435 -1711 191 164 148 82 chr18 25121023 25121084 -61556464 - MIR SINE MIR -26 182 117 1890 95 4 8 chr18 25121207 25121460 -61556088 - AluSg SINE Alu -16 294 43 2238 109 3 0 chr18 25121501 25121794 -61555754 + AluSg SINE Alu 1 294 -16 1462 207 3 27 chr18 25121825 25122120 -61555428 + AluJo SINE Alu 1 288 -24 24 0 0 0 chr18 25122120 25122144 -61555404 + AT_rich Low_complexity Low_complexity 1 24 0 782 176 176 30 chr18 25122302 25122535 -61555013 - MLT1D LTR MaLR -147 358 92 423 285 76 19 chr18 25122551 25122709 -61554839 + MIR SINE MIR 21 187 -75 273 206 95 0 chr18 25122780 25122843 -61554705 + L2 LINE L2 3194 3262 -10 298 282 105 33 chr18 25125190 25125400 -61552148 + MIR SINE MIR 34 256 -6 203 250 21 0 chr18 25126173 25126221 -61551327 - MIR3 SINE MIR -13 195 147 1863 150 0 14 chr18 25126473 25126767 -61550781 + AluSx SINE Alu 1 290 -22 315 293 85 48 chr18 25126961 25127032 -61550516 + MIR SINE MIR 49 116 -146 1880 143 29 0 chr18 25127032 25127311 -61550237 - AluJb SINE Alu -7 305 19 315 293 85 48 chr18 25127311 25127427 -61550121 + MIR SINE MIR 116 243 -19 2413 107 0 0 chr18 25127631 25127941 -61549607 + AluSx SINE Alu 1 310 -2 1743 154 17 27 chr18 25128866 25129164 -61548384 - AluJb SINE Alu -14 298 4 1968 89 0 0 chr18 25130324 25130570 -61546978 + AluSc SINE Alu 44 289 -20 2821 167 40 13 chr18 25130745 25131291 -61546257 - L1MB3 LINE L1 -7 6176 5616 332 89 0 0 chr18 25131293 25131349 -61546199 + L1MC4 LINE L1 7930 8037 -5 2233 84 10 24 chr18 25131502 25131800 -61545748 + AluSp SINE Alu 1 294 -19 256 310 35 23 chr18 25131990 25132077 -61545471 + MIR SINE MIR 66 153 -55 2153 98 52 0 chr18 25132448 25132735 -61544813 + AluSc SINE Alu 1 302 -7 2145 122 0 0 chr18 25133593 25133918 -61543630 - AluSx SINE Alu 0 325 1 698 172 0 9 chr18 25134381 25134497 -61543051 - U5 snRNA snRNA -1 115 1 2428 86 3 0 chr18 25135102 25135403 -61542145 - AluSp SINE Alu -11 302 1 1766 181 3 7 chr18 25136117 25136427 -61541121 + AluJb SINE Alu 1 309 -3 353 279 74 74 chr18 25136494 25136845 -61540703 + MARNA DNA Mariner 182 532 -54 1000 157 11 22 chr18 25136845 25137023 -61540525 - FRAM SINE Alu 0 40 1 1697 152 39 32 chr18 25137717 25138027 -61539521 - AluJb SINE Alu 0 312 1 580 252 157 12 chr18 25138058 25138300 -61539248 + L2 LINE L2 2682 2958 -356 461 148 119 20 chr18 25138293 25138394 -61539154 + L2 LINE L2 3203 3313 0 * 186 133 0 0 chr18 25138400 25138430 -61539118 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 37 23 0 0 chr18 25138617 25138661 -61538887 + AT_rich Low_complexity Low_complexity 1 44 0 2374 102 0 0 chr18 25139703 25140007 -61537541 + AluSx SINE Alu 1 304 -8 31 0 0 0 chr18 25140637 25140668 -61536880 + AT_rich Low_complexity Low_complexity 1 31 0 1572 137 78 7 chr18 25140843 25141113 -61536435 - Tigger3(Golem) DNA MER2_type -1 3028 2740 1635 136 25 102 chr18 25141113 25141437 -61536111 + AluJb SINE Alu 1 299 -13 2040 116 27 23 chr18 25141642 25141943 -61535605 + AluSq SINE Alu 1 302 -11 23 0 0 0 chr18 25143059 25143082 -61534466 + AT_rich Low_complexity Low_complexity 1 23 0 287 273 36 52 chr18 25143220 25143402 -61534146 - MIR SINE MIR -50 212 34 21 57 0 0 chr18 25144118 25144153 -61533395 + AT_rich Low_complexity Low_complexity 1 35 0 2487 71 0 7 chr18 25144477 25144787 -61532761 - AluY SINE Alu -3 308 1 1901 148 16 10 chr18 25145204 25145508 -61532040 - AluSg1 SINE Alu -3 306 1 268 175 12 62 chr18 25146265 25146345 -61531203 - MER4-int LTR ERV1 -5430 1168 1093 253 272 97 19 chr18 25146808 25146911 -61530637 - MER5A DNA MER1_type -78 111 1 262 359 21 14 chr18 25147049 25147194 -61530354 - L2 LINE L2 -227 3045 2900 296 43 0 43 chr18 25148081 25148128 -61529420 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 2436 72 0 3 chr18 25148309 25148616 -61528932 - AluSg1 SINE Alu -2 307 2 253 146 182 0 chr18 25149937 25149992 -61527556 - MER20B DNA MER1_type -605 178 114 2400 45 23 16 chr18 25150131 25150439 -61527109 - AluY SINE Alu -1 310 1 4524 88 62 14 chr18 25150642 25151291 -61526257 - L1MA2 LINE L1 -6 6298 5619 2264 87 11 0 chr18 25152255 25152541 -61525007 + AluSg1 SINE Alu 1 289 -20 1940 78 39 4 chr18 25152997 25153255 -61524293 + AluY SINE Alu 35 301 -10 23 0 0 0 chr18 25153749 25153772 -61523776 + AT_rich Low_complexity Low_complexity 1 23 0 1373 165 61 15 chr18 25153772 25154033 -61523515 - AluJo SINE Alu -24 288 16 2094 129 0 0 chr18 25154111 25154406 -61523142 - AluSx SINE Alu -13 299 5 836 132 7 29 chr18 25154694 25154830 -61522718 + FLAM_C SINE Alu 1 133 0 210 224 119 15 chr18 25155393 25155460 -61522088 - L2 LINE L2 -5 3308 3235 227 351 11 0 chr18 25155465 25155559 -61521989 + L1ME LINE L1 137 231 -5974 319 360 31 65 chr18 25155572 25155959 -61521589 + L1ME LINE L1 167 664 -5541 386 287 60 39 chr18 25156130 25156500 -61521048 + L1ME LINE L1 634 1017 -5188 898 139 15 0 chr18 25156633 25156770 -61520778 + AluSg/x SINE Alu 155 293 -19 1109 216 127 36 chr18 25156776 25157226 -61520322 + L1ME LINE L1 1242 1732 -4664 1443 174 162 12 chr18 25157226 25157485 -61520063 + AluJb SINE Alu 5 302 0 813 217 66 70 chr18 25157500 25157786 -61519762 + L1M4 LINE L1 3969 4253 -1893 265 141 56 99 chr18 25158045 25158116 -61519432 - MLT1L LTR MaLR -2 613 442 473 229 57 51 chr18 25158394 25158551 -61518997 - MER20B DNA MER1_type -625 158 1 5716 108 87 97 chr18 25158748 25160329 -61517219 - pTR5 LTR ERV1 0 2438 741 1950 44 4 0 chr18 25160981 25161209 -61516339 - AluY SINE Alu 0 311 83 2116 142 0 7 chr18 25161900 25162202 -61515346 - AluSx SINE Alu -12 300 1 472 282 94 28 chr18 25162463 25162644 -61514904 - MIR SINE MIR -23 239 47 21 57 0 0 chr18 25162816 25162851 -61514697 + AT_rich Low_complexity Low_complexity 1 35 0 1335 252 38 20 chr18 25163096 25163548 -61514000 - L1MCc LINE L1 -5200 1223 764 1547 219 37 30 chr18 25163567 25163996 -61513552 - L1MCc LINE L1 -5968 455 24 2343 105 0 3 chr18 25164034 25164340 -61513208 + AluSg SINE Alu 1 305 -5 870 107 18 0 chr18 25165717 25165829 -61511719 - FLAM_C SINE Alu -15 118 5 2519 57 3 3 chr18 25168528 25168829 -61508719 - AluSp SINE Alu -12 301 1 361 249 163 69 chr18 25171066 25171343 -61506205 - L2 LINE L2 -387 2927 2625 2333 84 10 0 chr18 25173944 25174241 -61503307 - AluSp SINE Alu -13 300 1 258 135 39 19 chr18 25174257 25174309 -61503239 - MIR SINE MIR -119 143 91 2349 126 61 21 chr18 25174384 25174633 -61502915 + L1M1 LINE L1 5327 5602 -701 2690 46 0 0 chr18 25174633 25174940 -61502608 - AluY SINE Alu -4 307 1 2349 126 61 21 chr18 25174940 25175118 -61502430 + L1M1 LINE L1 5602 5771 -532 224 227 45 15 chr18 25175537 25175603 -61501945 - MIR SINE MIR -181 81 14 602 239 112 25 chr18 25175795 25175992 -61501556 - MER20 DNA MER1_type -5 214 1 2085 122 3 3 chr18 25176027 25176323 -61501225 + AluSx SINE Alu 1 296 -16 623 106 10 39 chr18 25176330 25176434 -61501114 + L1MA3 LINE L1 6198 6298 -7 407 235 0 12 chr18 25177707 25177788 -61499760 + Tigger3(Golem) DNA MER2_type 1 80 -2949 545 172 43 0 chr18 25177919 25178012 -61499536 + Tigger3(Golem) DNA MER2_type 2919 3015 -14 303 288 144 0 chr18 25178044 25178162 -61499386 + L2 LINE L2 3172 3306 -7 885 123 0 0 chr18 25178326 25178440 -61499108 - FRAM SINE Alu -25 151 38 353 253 21 21 chr18 25179562 25179657 -61497891 - MER5A DNA MER1_type -74 115 21 445 291 151 5 chr18 25179678 25179884 -61497664 - MIR SINE MIR -14 248 13 952 99 0 0 chr18 25180715 25180836 -61496712 - 5S rRNA rRNA 0 121 1 1554 146 36 39 chr18 25180880 25181160 -61496388 - AluJo SINE Alu -33 279 1 2146 104 17 7 chr18 25181246 25181544 -61496004 - AluSg SINE Alu -9 301 1 220 374 0 8 chr18 25181868 25181991 -61495557 - MIR SINE MIR -57 151 30 2498 61 0 0 chr18 25182156 25182449 -61495099 - AluSg SINE Alu -15 295 3 3595 107 26 0 chr18 25183111 25183617 -61493931 + L1PA14 LINE L1 5643 6161 0 2351 90 0 0 chr18 25183618 25183917 -61493631 - AluSx SINE Alu -5 307 9 3095 204 51 67 chr18 25183954 25184569 -61492979 - L1ME1 LINE L1 -17 6543 5920 1400 178 22 0 chr18 25184569 25184800 -61492748 + MER46A DNA MER2_type 1 236 0 3095 204 51 67 chr18 25184800 25184984 -61492564 - L1ME1 LINE L1 -640 5920 5735 1648 164 10 27 chr18 25184984 25185283 -61492265 - AluJo SINE Alu -10 302 9 3095 204 51 67 chr18 25185283 25185312 -61492236 - L1ME1 LINE L1 -825 5735 5707 399 89 0 0 chr18 25185312 25185368 -61492180 + (TA)n Simple_repeat Simple_repeat 2 57 0 3095 204 51 67 chr18 25185368 25185383 -61492165 - L1ME1 LINE L1 -853 5707 5693 1902 164 0 16 chr18 25185383 25185700 -61491848 - AluJo SINE Alu 0 312 1 3095 204 51 67 chr18 25185700 25186601 -61490947 - L1ME1 LINE L1 -867 5693 4824 480 193 75 109 chr18 25186608 25186946 -61490602 - L1ME1 LINE L1 -5160 1380 920 466 342 40 20 chr18 25187471 25187775 -61489773 - L1ME1 LINE L1 -6197 343 34 213 39 0 0 chr18 25188418 25188444 -61489104 + (A)n Simple_repeat Simple_repeat 1 26 0 2113 124 7 3 chr18 25188505 25188803 -61488745 - AluSg SINE Alu -11 299 1 30 0 0 0 chr18 25189206 25189236 -61488312 + AT_rich Low_complexity Low_complexity 1 30 0 1447 158 162 8 chr18 25189242 25189508 -61488040 - 7SLRNA srpRNA srpRNA -13 307 1 1034 67 0 0 chr18 25189531 25189665 -61487883 + L1PA4 LINE L1 6021 6154 -1 240 35 0 0 chr18 25190674 25190703 -61486845 + (TG)n Simple_repeat Simple_repeat 2 30 0 2317 56 0 11 chr18 25190805 25191090 -61486458 + AluY SINE Alu 1 282 -29 1055 197 118 98 chr18 25191848 25192214 -61485334 + MER93b LTR ERV1 1 373 0 224 29 0 29 chr18 25192281 25192315 -61485233 + (AAATG)n Simple_repeat Simple_repeat 5 37 0 2127 127 0 22 chr18 25193073 25193388 -61484160 - AluSx SINE Alu -4 308 1 22 35 0 0 chr18 25193465 25193494 -61484054 + AT_rich Low_complexity Low_complexity 1 29 0 2366 95 0 9 chr18 25193633 25193949 -61483599 - AluSq SINE Alu 0 313 1 385 234 143 32 chr18 25194087 25194241 -61483307 + MIR SINE MIR 1 171 -91 328 237 7 86 chr18 25194369 25194508 -61483040 - L1ME LINE L1 -473 5648 5521 275 146 0 21 chr18 25194572 25194620 -61482928 - L2 LINE L2 -5 3308 3262 221 273 18 73 chr18 25194648 25194758 -61482790 + L2 LINE L2 2957 3060 -212 2609 151 90 24 chr18 25195169 25195532 -61482016 + L1MC1 LINE L1 5764 6178 -155 2252 88 27 3 chr18 25195532 25195829 -61481719 - AluSg SINE Alu -2 308 5 2609 151 90 24 chr18 25195829 25195996 -61481552 + L1MC1 LINE L1 6178 6333 0 1668 187 17 3 chr18 25196004 25196298 -61481250 + AluJo SINE Alu 1 298 -14 578 215 59 73 chr18 25196303 25196591 -61480957 + MER69 DNA AcHobo 2143 2426 -100 552 288 87 9 chr18 25196597 25196816 -61480732 + L1ME4a LINE L1 5877 6112 -9 2424 82 0 0 chr18 25196848 25197140 -61480408 + AluSg SINE Alu 11 302 -8 225 278 0 0 chr18 25197688 25197742 -61479806 + MIR SINE MIR 35 88 -174 1714 143 13 36 chr18 25198039 25198347 -61479201 - AluJo SINE Alu -11 301 1 22 0 0 0 chr18 25198455 25198477 -61479071 + AT_rich Low_complexity Low_complexity 1 22 0 268 250 181 52 chr18 25201733 25201981 -61475567 + L1 LINE L1 3850 4129 -2017 252 289 70 25 chr18 25202320 25202521 -61475027 + L1 LINE L1 4887 5096 -1050 1633 148 112 7 chr18 25202947 25203224 -61474324 + AluSg1 SINE Alu 1 306 -3 1147 228 56 99 chr18 25204582 25204717 -61472831 - L1MC5 LINE L1 -36 7925 7786 1704 183 3 3 chr18 25204717 25205017 -61472531 - AluJo SINE Alu -12 300 1 1147 228 56 99 chr18 25205017 25205082 -61472466 - L1MC5 LINE L1 -175 7786 7720 1203 106 51 64 chr18 25205082 25205282 -61472266 - L1MA8 LINE L1 -12 6279 6081 2249 102 0 7 chr18 25205282 25205585 -61471963 + AluSx SINE Alu 1 301 -11 1203 106 51 64 chr18 25205585 25205620 -61471928 - L1MA8 LINE L1 -210 6081 6047 735 124 29 9 chr18 25205623 25205728 -61471820 - U6 snRNA snRNA 0 107 1 1147 228 56 99 chr18 25205728 25206201 -61471347 - L1MC5 LINE L1 -243 7718 7276 355 238 47 15 chr18 25206340 25206470 -61471078 - L1MC5 LINE L1 -747 7214 7103 2146 133 3 0 chr18 25206475 25206777 -61470771 + AluSx SINE Alu 5 307 -5 899 242 1 6 chr18 25207025 25207244 -61470304 - L1MC5 LINE L1 -1109 6886 6650 2069 134 0 3 chr18 25207497 25207804 -61469744 - AluSx SINE Alu -6 306 1 21 0 0 0 chr18 25208476 25208497 -61469051 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr18 25208553 25208573 -61468975 + (TTGG)n Simple_repeat Simple_repeat 2 21 0 1757 148 21 14 chr18 25210458 25210742 -61466806 - AluSx SINE Alu -26 286 1 1965 102 49 21 chr18 25211670 25211954 -61465594 + AluSc SINE Alu 1 292 -17 349 70 18 0 chr18 25212106 25212163 -61465385 - AluSp/q SINE Alu -7 296 239 1300 136 5 5 chr18 25212163 25212347 -61465201 - AluSx SINE Alu -128 184 1 1186 201 81 31 chr18 25212465 25212761 -61464787 + Charlie1b DNA MER1_type 16 341 -2420 2190 113 0 7 chr18 25212761 25213070 -61464478 + AluSx SINE Alu 1 307 -5 1186 201 81 31 chr18 25213070 25213192 -61464356 + Charlie1b DNA MER1_type 341 455 -68 1933 171 0 7 chr18 25213195 25213504 -61464044 + AluJb SINE Alu 3 309 -3 2265 108 0 40 chr18 25213561 25213884 -61463664 - AluSg SINE Alu 0 310 1 291 161 32 0 chr18 25213885 25213947 -61463601 + Charlie1b DNA MER1_type 459 522 -1 2228 235 86 31 chr18 25214001 25215030 -61462518 - L1ME2 LINE L1 -10 6154 5072 1713 161 4 0 chr18 25215984 25216251 -61461297 + AluSx SINE Alu 1 268 -44 2224 88 0 0 chr18 25216645 25216919 -61460629 + AluSx SINE Alu 1 274 -38 268 263 140 18 chr18 25217026 25217140 -61460408 - L2 LINE L2 -2 3270 3143 2215 113 0 0 chr18 25217840 25218140 -61459408 + AluSx SINE Alu 3 302 -10 23 0 0 0 chr18 25218486 25218509 -61459039 + AT_rich Low_complexity Low_complexity 1 23 0 352 299 98 12 chr18 25218682 25218846 -61458702 - MIR SINE MIR -55 207 30 336 259 83 28 chr18 25218894 25219002 -61458546 + MIR SINE MIR 147 260 -2 298 259 66 47 chr18 25219671 25219961 -61457587 + L1P5 LINE L1 5333 5546 -608 25 21 0 43 chr18 25220732 25220751 -61456797 + AT_rich Low_complexity Low_complexity 1 19 -26 2102 117 3 0 chr18 25220751 25221041 -61456507 + AluSq SINE Alu 1 291 -22 25 21 0 43 chr18 25221041 25221068 -61456480 + AT_rich Low_complexity Low_complexity 19 45 0 21 57 0 0 chr18 25221641 25221676 -61455872 + AT_rich Low_complexity Low_complexity 1 35 0 194 288 27 27 chr18 25221803 25221876 -61455672 - MIR SINE MIR -106 102 30 2230 113 7 0 chr18 25222247 25222547 -61455001 - AluSx SINE Alu -10 302 1 708 169 107 17 chr18 25223362 25223438 -61454110 + Charlie5 DNA MER1_type 6 74 -2550 2352 94 3 3 chr18 25223438 25223746 -61453802 - AluSg SINE Alu -2 308 1 708 169 107 17 chr18 25223746 25223847 -61453701 + Charlie5 DNA MER1_type 74 199 -2425 807 147 124 14 chr18 25223856 25224074 -61453474 + Charlie5 DNA MER1_type 2330 2571 -41 385 222 20 0 chr18 25224080 25224179 -61453369 - MER20 DNA MER1_type -2 217 117 251 266 198 34 chr18 25224200 25224377 -61453171 - L3 LINE CR1 -90 1487 1282 360 299 85 43 chr18 25224427 25224638 -61452910 - L2 LINE L2 -13 3300 3081 184 301 145 45 chr18 25224763 25224869 -61452679 - L3 LINE CR1 -380 1197 1103 2192 127 0 3 chr18 25224869 25225177 -61452371 + AluSx SINE Alu 1 307 -5 184 301 145 45 chr18 25225177 25225339 -61452209 - L3 LINE CR1 -474 1103 902 2454 74 3 3 chr18 25225940 25226251 -61451297 + AluSq SINE Alu 1 311 -2 2123 136 3 0 chr18 25226650 25226960 -61450588 - AluSx SINE Alu -1 311 1 1717 178 16 7 chr18 25228700 25229009 -61448539 - AluJo SINE Alu 0 312 1 466 307 58 22 chr18 25229153 25229378 -61448170 + MIR SINE MIR 30 262 0 2275 107 0 3 chr18 25230521 25230821 -61446727 - AluSx SINE Alu -13 299 1 545 256 33 42 chr18 25231961 25232176 -61445372 - Charlie2a DNA MER1_type -133 2729 2517 1677 247 130 25 chr18 25232293 25233217 -61444331 - Charlie2a DNA MER1_type -365 2497 1477 624 265 64 97 chr18 25233341 25233797 -61443751 - Charlie2a DNA MER1_type -2238 544 104 666 311 105 0 chr18 25236377 25236596 -61440952 - MIR SINE MIR -1 261 20 885 190 32 9 chr18 25236604 25236825 -61440723 - L1MB3 LINE L1 -1 6182 5957 2023 157 0 0 chr18 25237092 25237392 -61440156 - AluSg SINE Alu 0 310 11 537 204 99 11 chr18 25238933 25239124 -61438424 + L1ME2 LINE L1 3115 3322 -2824 1412 251 116 9 chr18 25239128 25239682 -61437866 + L1ME2 LINE L1 5550 6162 -2 768 205 31 6 chr18 25239793 25239954 -61437594 + MLT1D LTR MaLR 1 165 -340 800 184 161 16 chr18 25240012 25240267 -61437281 - L1MB1 LINE L1 -180 6009 5718 262 282 71 12 chr18 25241504 25241589 -61435959 - MIR SINE MIR -20 242 153 468 130 39 0 chr18 25242044 25242121 -61435427 + AluJ/FRAM SINE Alu 219 298 -14 333 150 0 0 chr18 25242141 25242201 -61435347 + Alu SINE Alu 243 302 0 38 22 0 0 chr18 25242201 25242246 -61435302 + AT_rich Low_complexity Low_complexity 1 45 0 1924 86 97 8 chr18 25242512 25242779 -61434769 - AluSp SINE Alu -9 304 14 376 311 70 56 chr18 25242898 25243184 -61434364 - L2 LINE L2 -174 3139 2850 1924 150 0 7 chr18 25243638 25243944 -61433604 - AluJb SINE Alu -8 304 1 312 316 68 8 chr18 25244649 25244766 -61432782 - MIR SINE MIR -130 132 9 383 360 20 0 chr18 25245856 25246006 -61431542 + MIR3 SINE MIR 50 202 -6 659 300 170 17 chr18 25249626 25249973 -61427575 + L2 LINE L2 706 1105 -2209 668 243 61 64 chr18 25249993 25250186 -61427362 - MLT1B LTR MaLR -34 356 164 1047 97 0 0 chr18 25250186 25250340 -61427208 + (TTC)n Simple_repeat Simple_repeat 2 155 0 1665 177 7 0 chr18 25250342 25250619 -61426929 - AluJo SINE Alu -33 279 1 668 243 61 64 chr18 25250619 25250764 -61426784 - MLT1B LTR MaLR -227 163 16 628 299 116 4 chr18 25250765 25251033 -61426515 + L2 LINE L2 1058 1355 -1959 2107 133 0 0 chr18 25252050 25252336 -61425212 + AluSx SINE Alu 1 286 -26 29 0 0 0 chr18 25252336 25252365 -61425183 + AT_rich Low_complexity Low_complexity 1 29 0 427 127 25 0 chr18 25252862 25252941 -61424607 + Tigger1 DNA MER2_type 148 228 -2190 6904 68 5 7 chr18 25252941 25254103 -61423445 - L1PA6 LINE L1 -7 6147 4994 23 0 0 0 chr18 25255474 25255497 -61422051 + AT_rich Low_complexity Low_complexity 1 23 0 257 238 315 14 chr18 25255704 25255847 -61421701 + MIR SINE MIR 77 262 0 400 200 70 10 chr18 25257795 25257895 -61419653 + MER103 DNA DNA 3 108 -58 23 0 0 0 chr18 25257939 25257962 -61419586 + AT_rich Low_complexity Low_complexity 1 23 0 192 198 25 12 chr18 25259323 25259404 -61418144 + (TA)n Simple_repeat Simple_repeat 2 83 0 308 209 33 55 chr18 25259697 25259788 -61417760 - L1MC4 LINE L1 -1339 6703 6615 282 267 0 0 chr18 25259791 25259881 -61417667 + (TA)n Simple_repeat Simple_repeat 2 91 0 257 276 23 0 chr18 25259885 25259972 -61417576 + L1MC4 LINE L1 6614 6702 -1340 234 294 0 22 chr18 25259915 25260007 -61417541 - L1MC4 LINE L1 -1339 6703 6614 * 539 270 11 0 chr18 25260012 25260190 -61417358 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 387 369 0 0 chr18 25260190 25260301 -61417247 + (CA)n Simple_repeat Simple_repeat 1 111 0 251 307 0 16 chr18 25260310 25260437 -61417111 + (CATATA)n Simple_repeat Simple_repeat 3 127 0 596 219 6 17 chr18 25260444 25260622 -61416926 + (TA)n Simple_repeat Simple_repeat 1 176 0 207 318 0 0 chr18 25260622 25260688 -61416860 + (CATA)n Simple_repeat Simple_repeat 1 66 0 295 343 207 0 chr18 25260924 25261093 -61416455 - L2 LINE L2 -2883 431 228 189 94 0 0 chr18 25261264 25261296 -61416252 + (T)n Simple_repeat Simple_repeat 1 32 0 747 153 0 0 chr18 25261587 25261711 -61415837 + FLAM_C SINE Alu 2 125 -8 30 27 0 0 chr18 25261712 25261749 -61415799 + AT_rich Low_complexity Low_complexity 1 37 0 355 323 89 42 chr18 25261895 25262254 -61415294 - L1ME LINE L1 -393 5728 5353 505 264 96 33 chr18 25263053 25263405 -61414143 + L1MEc LINE L1 1450 1984 -4579 23 33 0 0 chr18 25263668 25263698 -61413850 + AT_rich Low_complexity Low_complexity 1 30 0 890 314 99 15 chr18 25263717 25264970 -61412578 + L1MEc LINE L1 2341 3655 -2727 224 333 24 0 chr18 25267591 25267675 -61409873 + GA-rich Low_complexity Low_complexity 3 88 0 1268 116 16 0 chr18 25268354 25268543 -61409005 + Tigger1 DNA MER2_type 562 753 -1665 * 1481 169 48 0 chr18 25268538 25268810 -61408738 + Tigger1 DNA MER2_type 2134 2418 0 22 35 0 0 chr18 25269011 25269040 -61408508 + AT_rich Low_complexity Low_complexity 1 29 0 351 0 0 0 chr18 25269791 25269830 -61407718 + (TG)n Simple_repeat Simple_repeat 2 40 0 399 285 24 0 chr18 25271285 25271408 -61406140 + MIR SINE MIR 129 254 -8 763 29 10 10 chr18 25271902 25272005 -61405543 + (TTCC)n Simple_repeat Simple_repeat 2 104 0 21 0 0 0 chr18 25273168 25273189 -61404359 + AT_rich Low_complexity Low_complexity 1 21 0 470 256 61 39 chr18 25274279 25274459 -61403089 - MIR SINE MIR -71 191 8 27 0 0 0 chr18 25274684 25274711 -61402837 + AT_rich Low_complexity Low_complexity 1 27 0 32 26 0 0 chr18 25274870 25274909 -61402639 + AT_rich Low_complexity Low_complexity 1 39 0 2136 131 0 0 chr18 25275266 25275564 -61401984 + AluSx SINE Alu 1 298 -14 282 95 0 0 chr18 25276060 25276102 -61401446 + (CA)n Simple_repeat Simple_repeat 1 42 0 261 83 0 0 chr18 25276103 25276139 -61401409 + (TC)n Simple_repeat Simple_repeat 1 36 0 1583 173 12 0 chr18 25276850 25277104 -61400444 - AluJb SINE Alu -47 265 9 387 340 61 12 chr18 25277122 25277466 -61400082 + L1M4 LINE L1 4458 4818 -1328 * 4031 234 50 18 chr18 25277463 25278570 -61398978 - L1M4c LINE L1 -4713 1933 774 387 0 0 0 chr18 25278570 25278613 -61398935 + (TG)n Simple_repeat Simple_repeat 2 44 0 4031 234 50 18 chr18 25278613 25278772 -61398776 - L1M4c LINE L1 -5872 774 621 1636 65 5 5 chr18 25278884 25279098 -61398450 + AluY SINE Alu 88 301 -10 2913 244 39 17 chr18 25281205 25281902 -61395646 + MER21B LTR ERV1 108 819 -44 222 345 96 18 chr18 25281931 25282151 -61395397 + L2 LINE L2 2817 3053 -219 1150 199 17 112 chr18 25282181 25282584 -61394964 + MLT1A1 LTR MaLR 1 365 0 193 250 100 17 chr18 25282742 25282802 -61394746 + L2 LINE L2 3188 3252 -20 200 286 0 18 chr18 25283597 25283653 -61393895 + L2 LINE L2 3187 3241 -72 184 285 44 145 chr18 25283807 25283905 -61393643 - L2 LINE L2 -20 3252 3146 1086 210 23 0 chr18 25283905 25284119 -61393429 + MER20 DNA MER1_type 1 219 0 184 285 44 145 chr18 25284119 25284269 -61393279 - L2 LINE L2 -126 3146 3029 * 312 314 117 22 chr18 25284264 25284624 -61392924 - L2 LINE L2 -1053 2261 1868 446 258 171 14 chr18 25284721 25285077 -61392471 + L1ME4a LINE L1 5709 6120 -1 300 172 0 0 chr18 25285161 25285219 -61392329 + (TG)n Simple_repeat Simple_repeat 2 59 0 522 324 78 31 chr18 25285224 25285709 -61391839 - L2 LINE L2 -1619 1695 1188 325 303 99 7 chr18 25286651 25286793 -61390755 - L2 LINE L2 -669 2645 2491 477 303 6 56 chr18 25286833 25287011 -61390537 + MIR SINE MIR 94 262 0 209 217 0 0 chr18 25287125 25287171 -61390377 + (TA)n Simple_repeat Simple_repeat 2 47 0 356 189 0 22 chr18 25287501 25287591 -61389957 + (TATG)n Simple_repeat Simple_repeat 1 88 0 2571 109 3 8 chr18 25287740 25288106 -61389442 + THE1B LTR MaLR 1 364 0 411 197 0 0 chr18 25288203 25288279 -61389269 + AluJ/FLAM SINE Alu 1 76 -236 298 361 66 0 chr18 25288326 25288448 -61389100 + L2 LINE L2 3143 3272 0 195 42 0 0 chr18 25289956 25289980 -61387568 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 715 275 68 44 chr18 25290258 25290939 -61386609 + L1MCc LINE L1 1279 2137 -4804 203 403 13 0 chr18 25291247 25291324 -61386224 - L2 LINE L2 -20 3252 3175 49 0 0 0 chr18 25294156 25294205 -61383343 + AT_rich Low_complexity Low_complexity 1 49 0 369 0 0 0 chr18 25295037 25295078 -61382470 + (TG)n Simple_repeat Simple_repeat 2 42 0 183 42 0 0 chr18 25295315 25295339 -61382209 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 221 255 0 0 chr18 25296015 25296062 -61381486 + A-rich Low_complexity Low_complexity 1 47 0 425 341 108 33 chr18 25299037 25299489 -61378059 - L2 LINE L2 -629 2685 2200 850 238 0 17 chr18 25301841 25302022 -61375526 + MER45A DNA AcHobo 1 178 0 21 36 0 0 chr18 25303426 25303454 -61374094 + AT_rich Low_complexity Low_complexity 1 28 0 1828 120 55 0 chr18 25303678 25303952 -61373596 - AluSg SINE Alu -21 289 1 180 0 0 0 chr18 25304644 25304664 -61372884 + (CAAA)n Simple_repeat Simple_repeat 4 23 0 22 0 0 0 chr18 25306397 25306419 -61371129 + AT_rich Low_complexity Low_complexity 1 22 0 855 234 121 7 chr18 25307637 25307927 -61369621 + MER5C DNA MER1_type 1 323 -1 300 91 0 0 chr18 25309153 25309197 -61368351 + (TTTTG)n Simple_repeat Simple_repeat 2 45 0 22 80 0 0 chr18 25309735 25309785 -61367763 + AT_rich Low_complexity Low_complexity 1 50 0 1666 160 36 26 chr18 25309941 25310248 -61367300 + AluJo SINE Alu 1 310 -2 46 33 0 0 chr18 25310559 25310619 -61366929 + AT_rich Low_complexity Low_complexity 1 60 0 337 273 47 41 chr18 25310669 25310841 -61366707 + Charlie7 DNA MER1_type 59 231 -2381 1466 217 25 95 chr18 25310846 25311280 -61366268 + L1M4 LINE L1 4727 5103 -1043 2375 109 0 0 chr18 25311280 25311591 -61365957 + AluSx SINE Alu 1 311 -1 1466 217 25 95 chr18 25311591 25311796 -61365752 + L1M4 LINE L1 5103 5321 -825 511 179 117 7 chr18 25311809 25311954 -61365594 + L1M4 LINE L1 5295 5455 -729 219 365 71 24 chr18 25312471 25312556 -61364992 - L2 LINE L2 -50 3222 3134 775 168 144 48 chr18 25312970 25313220 -61364328 + ORSL DNA AcHobo 2 275 0 2696 161 62 10 chr18 25313547 25314067 -61363481 + MER7C DNA MER2_type 1 547 -55 195 386 0 23 chr18 25314144 25314232 -61363316 - L2 LINE L2 -219 3053 2968 248 182 74 116 chr18 25314939 25315060 -61362488 + L2 LINE L2 3198 3313 0 333 125 0 0 chr18 25317176 25317232 -61360316 + (TG)n Simple_repeat Simple_repeat 2 57 0 22 0 0 0 chr18 25317389 25317411 -61360137 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr18 25317698 25317730 -61359818 + AT_rich Low_complexity Low_complexity 1 32 0 241 253 68 49 chr18 25318388 25318550 -61358998 - MLT1H LTR MaLR -12 537 373 195 69 0 0 chr18 25319215 25319244 -61358304 + (A)n Simple_repeat Simple_repeat 1 29 0 214 306 36 108 chr18 25319636 25319747 -61357801 + MIR SINE MIR 20 122 -86 228 241 0 0 chr18 25320685 25320743 -61356805 + T-rich Low_complexity Low_complexity 5 62 0 2564 172 66 16 chr18 25320751 25321320 -61356228 - L1 LINE L1 -1446 4700 4098 623 167 9 184 chr18 25321320 25321553 -61355995 + 7SK RNA RNA 2 193 0 2564 172 66 16 chr18 25321553 25321592 -61355956 - L1 LINE L1 -2048 4098 4062 4943 201 57 13 chr18 25321593 25322995 -61354553 + L1MB8 LINE L1 2570 4033 -2113 784 218 71 36 chr18 25322995 25323247 -61354301 + MLT1E2 LTR MaLR 159 419 -207 732 177 63 29 chr18 25323214 25323389 -61354159 + MLT1D LTR MaLR 323 503 -2 * 2861 178 44 30 chr18 25324504 25324906 -61352642 + L1MB8 LINE L1 5493 5911 -267 2095 127 0 3 chr18 25324906 25325213 -61352335 + AluSx SINE Alu 2 307 -5 2861 178 44 30 chr18 25325213 25325485 -61352063 + L1MB8 LINE L1 5911 6177 -1 244 169 69 31 chr18 25325530 25325660 -61351888 + Charlie7 DNA MER1_type 2410 2544 -68 2078 112 4 0 chr18 25325736 25326013 -61351535 + AluSp SINE Alu 30 307 -6 189 0 0 0 chr18 25326427 25326448 -61351100 + (A)n Simple_repeat Simple_repeat 1 21 0 22 0 0 0 chr18 25327614 25327636 -61349912 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 25328097 25328121 -61349427 + AT_rich Low_complexity Low_complexity 1 24 0 648 355 69 46 chr18 25328515 25328904 -61348644 - L2 LINE L2 0 3272 2875 1358 203 7 42 chr18 25329520 25329830 -61347718 - AluJo SINE Alu -12 300 2 595 235 90 55 chr18 25330023 25330223 -61347325 - L2 LINE L2 0 3313 3107 445 265 29 0 chr18 25330306 25330442 -61347106 - L2 LINE L2 -3138 176 37 379 268 163 0 chr18 25331573 25331696 -61345852 - MIR SINE MIR -116 146 4 303 307 30 0 chr18 25333191 25333292 -61344256 + MIR SINE MIR 100 203 -59 338 256 39 0 chr18 25333629 25333733 -61343815 - MER5A DNA MER1_type -77 112 4 221 295 18 54 chr18 25333738 25333874 -61343674 + MIR SINE MIR 81 212 -50 258 213 213 0 chr18 25334329 25334404 -61343144 - L2 LINE L2 0 3313 3223 223 245 57 0 chr18 25335078 25335131 -61342417 - MIR SINE MIR -90 172 117 3437 120 54 0 chr18 25337278 25337778 -61339770 - MER1A DNA MER1_type 0 527 1 31 26 0 0 chr18 25338024 25338062 -61339486 + AT_rich Low_complexity Low_complexity 1 38 0 412 354 17 17 chr18 25340206 25340381 -61337167 + MIR3 SINE MIR 30 204 -4 650 221 80 0 chr18 25340808 25340971 -61336577 - MER5B DNA MER1_type 0 178 3 26497 111 9 15 chr18 25341251 25345484 -61332064 - L1P LINE L1 -1927 4219 11 12178 139 22 18 chr18 25345494 25347685 -61329863 + Tigger1 DNA MER2_type 219 2418 0 2473 88 0 3 chr18 25348058 25348363 -61329185 - AluSx SINE Alu -8 304 1 210 356 0 0 chr18 25349402 25349475 -61328073 + C-rich Low_complexity Low_complexity 6 78 0 413 261 51 67 chr18 25349475 25349670 -61327878 + L2 LINE L2 1806 1997 -1317 2068 130 0 3 chr18 25350089 25350382 -61327166 + AluSx SINE Alu 1 292 -20 2072 113 7 10 chr18 25350915 25351215 -61326333 - AluSx SINE Alu -9 303 5 210 148 19 37 chr18 25351404 25351417 -61326131 + (CAAA)n Simple_repeat Simple_repeat 4 16 -40 902 177 5 0 chr18 25351417 25351603 -61325945 + L1MB3 LINE L1 5988 6174 -9 210 148 19 37 chr18 25351603 25351643 -61325905 + (CAAA)n Simple_repeat Simple_repeat 16 56 0 690 147 52 0 chr18 25352140 25352256 -61325292 + FLAM_A SINE Alu 1 122 -11 2065 122 17 0 chr18 25352459 25352754 -61324794 - AluSx SINE Alu -9 303 4 204 361 41 21 chr18 25353925 25354022 -61323526 - L2 LINE L2 -16 3256 3158 2118 121 0 13 chr18 25354809 25355115 -61322433 - AluSx SINE Alu -3 309 8 232 312 43 21 chr18 25355173 25355266 -61322282 - L2 LINE L2 -181 3091 2997 581 330 61 15 chr18 25356139 25356400 -61321148 - L2 LINE L2 -421 2893 2621 505 279 174 27 chr18 25356430 25356649 -61320899 - MIR SINE MIR 0 262 12 328 305 278 4 chr18 25356657 25356916 -61320632 - L2 LINE L2 -752 2562 2233 2071 173 126 9 chr18 25356919 25357371 -61320177 + MLT1D LTR MaLR 1 505 0 321 352 60 16 chr18 25357399 25357649 -61319899 - L2 LINE L2 -1677 1637 1377 367 184 0 61 chr18 25357890 25357988 -61319560 - MER117 DNA MER1_type -105 92 1 254 324 35 7 chr18 25358074 25358219 -61319329 + L1MC/D LINE L1 5739 5887 -1921 21 37 0 56 chr18 25358456 25358477 -61319071 + AT_rich Low_complexity Low_complexity 1 22 -29 2001 144 0 10 chr18 25358477 25358775 -61318773 - AluJb SINE Alu -17 295 1 21 37 0 56 chr18 25358775 25358807 -61318741 + AT_rich Low_complexity Low_complexity 22 51 0 647 222 50 20 chr18 25359650 25359854 -61317694 - MIR SINE MIR -12 250 42 25 31 0 0 chr18 25360931 25360963 -61316585 + AT_rich Low_complexity Low_complexity 1 32 0 2142 124 7 0 chr18 25361087 25361393 -61316155 - AluSx SINE Alu -4 308 1 7343 54 2 18 chr18 25362067 25363486 -61314062 + L1PA7 LINE L1 4762 6166 0 186 133 0 0 chr18 25363506 25363536 -61314012 + (A)n Simple_repeat Simple_repeat 1 30 0 1390 150 53 0 chr18 25364173 25364419 -61313129 + AluSx SINE Alu 49 307 -5 1663 151 27 14 chr18 25366267 25366559 -61310989 - AluJo SINE Alu -16 296 1 2173 102 0 7 chr18 25367097 25367381 -61310167 + AluSq SINE Alu 1 282 -31 189 0 0 0 chr18 25367385 25367406 -61310142 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1889 263 195 76 chr18 25367509 25367682 -61309866 - L2 LINE L2 -508 2806 2655 2306 103 0 0 chr18 25367682 25367982 -61309566 + AluSx SINE Alu 5 304 -8 1889 263 195 76 chr18 25367982 25368641 -61308907 - L2 LINE L2 -659 2655 2076 1656 158 13 30 chr18 25368641 25368939 -61308609 - AluJb SINE Alu -19 293 1 1889 263 195 76 chr18 25368939 25369373 -61308175 - L2 LINE L2 -1238 2076 1388 21879 150 33 19 chr18 25370516 25371322 -61306226 + L1MA2 LINE L1 19 812 -6753 2010 131 3 0 chr18 25371322 25371643 -61305905 - AluSx SINE Alu 0 322 1 21879 150 33 19 chr18 25371643 25374598 -61302950 + L1MA2 LINE L1 812 3879 -3686 3436 162 32 75 chr18 25374598 25375319 -61302229 - LTR8 LTR ERV1 0 691 2 21879 150 33 19 chr18 25375319 25376513 -61301035 + L1MA2 LINE L1 3879 5054 -2511 633 133 0 10 chr18 25376524 25376622 -61300926 + MER4A LTR ERV1 2 98 -566 1470 152 43 22 chr18 25376622 25376924 -61300624 + MER4A LTR ERV1 261 627 -37 742 145 38 30 chr18 25376924 25377055 -61300493 - AluSg/x SINE Alu -12 297 166 1640 98 0 0 chr18 25377055 25377260 -61300288 - AluSx SINE Alu -105 207 3 320 106 21 0 chr18 25377262 25377309 -61300239 + MER4A LTR ERV1 617 664 0 9241 133 31 16 chr18 25377312 25379922 -61297626 + L1MA2 LINE L1 5075 7723 0 1950 64 110 14 chr18 25380095 25380376 -61297172 - AluYa5 SINE Alu -3 308 1 181 283 22 0 chr18 25380409 25380455 -61297093 + L2 LINE L2 3230 3276 -37 639 221 128 50 chr18 25380493 25380894 -61296654 + MLT1J LTR MaLR 1 511 0 3982 179 70 26 chr18 25381007 25381985 -61295563 + L1MB5 LINE L1 5152 6168 -6 2286 201 28 50 chr18 25382026 25382602 -61294946 + L1ME1 LINE L1 5599 6161 -5 1697 166 0 60 chr18 25382719 25383033 -61294515 + AluJb SINE Alu 1 295 -17 270 265 74 56 chr18 25383742 25383783 -61293765 - L1MA10 LINE L1 -1 6333 6293 1213 184 10 133 chr18 25383783 25384180 -61293368 - L1ME2 LINE L1 -44 6120 5773 362 127 70 0 chr18 25384528 25384599 -61292949 + L1MB3 LINE L1 6107 6182 -1 2174 107 3 7 chr18 25384815 25385105 -61292443 - AluSx SINE Alu -23 289 1 247 341 32 32 chr18 25385985 25386108 -61291440 + MIR SINE MIR 24 146 -116 22 35 0 0 chr18 25386313 25386342 -61291206 + AT_rich Low_complexity Low_complexity 1 29 0 2227 132 0 0 chr18 25386366 25386677 -61290871 + AluSx SINE Alu 1 311 -1 1168 268 79 72 chr18 25388047 25389190 -61288358 + L1M4 LINE L1 3084 4234 -1912 1961 157 0 13 chr18 25389275 25389588 -61287960 - AluJb SINE Alu -3 309 1 453 85 0 0 chr18 25389634 25389693 -61287855 + L1PA8A LINE L1 6045 6103 -28 271 332 252 18 chr18 25389736 25390535 -61287013 + L2 LINE L2 1890 2875 -439 224 309 0 0 chr18 25390879 25390934 -61286614 - L2 LINE L2 -41 3231 3177 306 0 0 0 chr18 25391020 25391054 -61286494 + (CA)n Simple_repeat Simple_repeat 2 35 0 25 0 0 0 chr18 25393051 25393076 -61284472 + GC_rich Low_complexity Low_complexity 1 25 0 264 59 0 0 chr18 25393405 25393439 -61284109 + (T)n Simple_repeat Simple_repeat 1 34 0 2074 125 0 7 chr18 25394080 25394376 -61283172 - AluSx SINE Alu -18 294 1 181 229 0 21 chr18 25394608 25394656 -61282892 - MIR SINE MIR -31 231 185 226 222 56 0 chr18 25394785 25394839 -61282709 - L2 LINE L2 0 3313 3257 2289 110 0 0 chr18 25395122 25395421 -61282127 + AluSx SINE Alu 3 301 -11 684 307 128 34 chr18 25395536 25395794 -61281754 - L2 LINE L2 -958 2356 2124 2101 125 0 10 chr18 25395794 25396098 -61281450 + AluSx SINE Alu 1 301 -11 684 307 128 34 chr18 25396098 25396285 -61281263 - L2 LINE L2 -1190 2124 1869 2216 105 7 3 chr18 25396897 25397193 -61280355 - AluSx SINE Alu -12 300 4 2035 88 16 46 chr18 25397603 25397909 -61279639 - AluSq SINE Alu -4 309 13 213 330 175 15 chr18 25398592 25398792 -61278756 - MIR SINE MIR -7 255 24 221 259 0 19 chr18 25399331 25399385 -61278163 - MIR SINE MIR -61 147 95 388 252 0 29 chr18 25399561 25399664 -61277884 - MIR SINE MIR -1 261 162 1663 155 0 47 chr18 25400311 25400607 -61276941 + AluJo SINE Alu 11 292 -20 183 42 0 0 chr18 25400999 25401023 -61276525 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1347 135 190 13 chr18 25401026 25401125 -61276423 - AluSg1 SINE Alu -30 279 199 2146 111 10 0 chr18 25401125 25401413 -61276135 - AluSx SINE Alu -21 291 1 1347 135 190 13 chr18 25401413 25401550 -61275998 - AluSg1 SINE Alu -110 199 1 2399 95 3 0 chr18 25402247 25402552 -61274996 - AluSg SINE Alu -4 306 1 2249 114 0 10 chr18 25402552 25402859 -61274689 - AluSx SINE Alu -7 305 1 2287 128 3 62 chr18 25402969 25403327 -61274221 + MER1B DNA MER1_type 1 337 0 198 0 0 0 chr18 25403720 25403742 -61273806 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 255 204 0 0 chr18 25403946 25403995 -61273553 + L1MA5A LINE L1 6004 6052 -245 827 209 0 0 chr18 25403996 25404130 -61273418 + AluJo SINE Alu 2 135 -177 1753 138 3 69 chr18 25404130 25404463 -61273085 + AluSx SINE Alu 1 311 -1 951 229 52 3 chr18 25404527 25404815 -61272733 + L1M4 LINE L1 2169 2470 -3676 232 114 0 0 chr18 25404987 25405022 -61272526 + L1M4 LINE L1 2666 2700 -3446 4681 2 0 0 chr18 25405551 25406060 -61271488 - L1HS LINE L1 0 6155 5647 1323 98 0 0 chr18 25406063 25406236 -61271312 + AluSg/x SINE Alu 119 291 -18 234 0 0 0 chr18 25406458 25406484 -61271064 + (A)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr18 25406599 25406621 -61270927 + AT_rich Low_complexity Low_complexity 1 22 0 275 325 9 18 chr18 25406621 25406735 -61270813 + AluSp SINE Alu 121 233 -70 831 165 31 0 chr18 25406946 25407073 -61270475 + FLAM_C SINE Alu 1 131 -2 1093 283 97 11 chr18 25407214 25407756 -61269792 - L2 LINE L2 0 3313 2722 186 43 0 0 chr18 25407883 25407906 -61269642 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2132 102 0 3 chr18 25407908 25408192 -61269356 - AluSc SINE Alu -26 283 1 1199 154 0 11 chr18 25408194 25408376 -61269172 - AluSg/x SINE Alu -12 298 119 22 0 0 0 chr18 25408376 25408398 -61269150 + AT_rich Low_complexity Low_complexity 1 22 0 206 42 0 0 chr18 25408514 25408538 -61269010 + (T)n Simple_repeat Simple_repeat 1 24 0 591 241 0 0 chr18 25408726 25408900 -61268648 + AluSg/x SINE Alu 127 300 -12 246 32 0 0 chr18 25408931 25408962 -61268586 + (CA)n Simple_repeat Simple_repeat 2 32 0 213 121 0 0 chr18 25409564 25409597 -61267951 + (TA)n Simple_repeat Simple_repeat 2 34 0 273 211 18 18 chr18 25410469 25410526 -61267022 + L2 LINE L2 2997 3053 -219 841 197 54 0 chr18 25410543 25410690 -61266858 + FRAM SINE Alu 4 158 -18 2283 106 0 0 chr18 25411493 25411794 -61265754 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr18 25412188 25412209 -61265339 + AT_rich Low_complexity Low_complexity 1 21 0 345 356 26 0 chr18 25412431 25412546 -61265002 - L2 LINE L2 -18 3254 3137 2215 92 3 0 chr18 25413109 25413437 -61264111 + AluSx SINE Alu 1 329 0 229 314 95 86 chr18 25413864 25414104 -61263444 - L2 LINE L2 -421 2893 2648 2406 81 10 0 chr18 25414104 25414400 -61263148 + AluSx SINE Alu 1 299 -13 229 314 95 86 chr18 25414400 25414484 -61263064 - L2 LINE L2 -666 2648 2566 458 157 0 0 chr18 25414538 25414608 -61262940 + 5S rRNA rRNA 18 87 -34 2218 101 10 0 chr18 25414866 25415163 -61262385 - AluSx SINE Alu -12 300 1 322 333 19 9 chr18 25415314 25415419 -61262129 - MIR SINE MIR -116 146 41 258 56 0 0 chr18 25415420 25415456 -61262092 + (TG)n Simple_repeat Simple_repeat 1 36 0 2091 124 0 0 chr18 25415461 25415743 -61261805 - AluSx SINE Alu -30 282 1 2777 99 0 0 chr18 25418107 25418471 -61259077 + THE1B LTR MaLR 1 364 0 825 179 106 103 chr18 25418911 25419269 -61258279 + L1ME2 LINE L1 5802 6160 -4 1719 153 3 84 chr18 25419418 25419739 -61257809 + AluJb SINE Alu 1 295 -17 229 285 116 35 chr18 25419969 25420141 -61257407 - L1MC4a LINE L1 -1807 6001 5816 1531 127 23 31 chr18 25420223 25420483 -61257065 - AluSx SINE Alu -8 304 47 1611 117 0 0 chr18 25420561 25420775 -61256773 - AluJb SINE Alu -14 298 85 233 195 0 0 chr18 25420775 25420816 -61256732 - AluJo/FLAM SINE Alu -52 250 210 22 0 0 0 chr18 25420816 25420838 -61256710 + AT_rich Low_complexity Low_complexity 1 22 0 827 136 8 0 chr18 25420838 25420963 -61256585 - FLAM_C SINE Alu -7 126 1 895 105 42 167 chr18 25421077 25421216 -61256332 + MER3 DNA MER1_type 1 99 -110 2065 101 10 27 chr18 25421216 25421514 -61256034 - AluSx SINE Alu -19 293 1 895 105 42 167 chr18 25421514 25421613 -61255935 + MER3 DNA MER1_type 99 209 0 468 218 0 0 chr18 25421800 25421887 -61255661 - FLAM_A SINE Alu -16 126 40 2303 116 0 0 chr18 25422208 25422519 -61255029 + AluSx SINE Alu 1 311 -1 2305 80 0 46 chr18 25422750 25423075 -61254473 + AluY SINE Alu 2 311 0 2000 112 35 14 chr18 25425297 25425603 -61251945 + AluSg SINE Alu 1 310 0 1953 108 0 0 chr18 25425604 25425864 -61251684 + AluSg SINE Alu 1 260 -50 429 304 9 0 chr18 25425996 25426108 -61251440 + MIR SINE MIR 34 146 -62 2096 123 3 22 chr18 25426263 25426579 -61250969 + AluSx SINE Alu 1 310 -2 928 24 103 8 chr18 25427280 25427406 -61250142 + MER85 DNA T2_type 2 139 0 885 293 76 35 chr18 25427435 25427998 -61249550 + L1ME LINE L1 30 615 -5455 183 82 20 41 chr18 25428004 25428053 -61249495 + (TTA)n Simple_repeat Simple_repeat 3 50 0 * 433 106 36 52 chr18 25428050 25428390 -61249158 + (TATAA)n Simple_repeat Simple_repeat 1 334 0 2070 145 3 3 chr18 25428422 25428733 -61248815 + AluSx SINE Alu 1 311 -1 941 236 149 47 chr18 25428797 25429334 -61248214 + L1ME LINE L1 2103 2694 -3386 2010 138 24 0 chr18 25430608 25430904 -61246644 + AluSg SINE Alu 2 304 -6 24 53 0 0 chr18 25431140 25431178 -61246370 + AT_rich Low_complexity Low_complexity 1 38 0 1540 186 68 22 chr18 25431470 25431836 -61245712 - MLT1D LTR MaLR -25 480 98 350 179 0 41 chr18 25432306 25432541 -61245007 + AluJo SINE Alu 1 293 -8 27 0 0 0 chr18 25432557 25432584 -61244964 + AT_rich Low_complexity Low_complexity 1 27 0 596 258 182 61 chr18 25432629 25433158 -61244390 - L2 LINE L2 -22 3291 2699 2434 87 3 3 chr18 25433189 25433501 -61244047 + AluSq SINE Alu 1 312 -1 496 144 48 10 chr18 25433597 25433701 -61243847 - L1MB8 LINE L1 0 6178 6071 1363 184 40 4 chr18 25433803 25434031 -61243517 - AluJb SINE Alu -76 236 1 313 193 0 0 chr18 25434038 25434095 -61243453 + Tigger5 DNA MER2_type 2263 2319 -4 428 329 13 13 chr18 25434370 25434519 -61243029 - L2 LINE L2 -609 2705 2557 2424 64 0 38 chr18 25434549 25434863 -61242685 - AluY SINE Alu -9 302 1 214 257 81 27 chr18 25435208 25435282 -61242266 + L2 LINE L2 3235 3312 -1 300 259 94 0 chr18 25435414 25435499 -61242049 + L1M4 LINE L1 4519 4611 -1535 877 154 8 0 chr18 25435713 25435843 -61241705 + AluSq/x SINE Alu 1 131 -181 2168 115 10 3 chr18 25436267 25436572 -61240976 - AluSx SINE Alu 0 312 6 818 265 11 0 chr18 25436580 25436765 -61240783 + MIR SINE MIR 12 198 -64 332 210 0 0 chr18 25436766 25436828 -61240720 - Tigger5 DNA MER2_type -1 2322 2261 * 409 200 27 0 chr18 25436816 25436891 -61240657 - Tigger5 DNA MER2_type -2245 78 2 1995 153 0 6 chr18 25437256 25437595 -61239953 + AluSx SINE Alu 1 312 0 323 304 169 27 chr18 25437668 25437852 -61239696 + L1MEd LINE L1 345 554 -5565 205 83 0 28 chr18 25437921 25437957 -61239591 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 443 231 115 66 chr18 25438157 25438521 -61239027 + L1MEd LINE L1 871 1252 -4867 1952 78 13 107 chr18 25438648 25438957 -61238591 + AluSq SINE Alu 21 300 -13 194 105 26 0 chr18 25439382 25439420 -61238128 + GA-rich Low_complexity Low_complexity 2 40 0 210 371 93 0 chr18 25439422 25439519 -61238029 - L2 LINE L2 -31 3241 3136 2221 104 7 3 chr18 25439683 25439991 -61237557 + AluSx SINE Alu 3 311 -1 336 244 193 48 chr18 25440012 25440385 -61237163 - LTR33 LTR ERVL -49 472 46 591 259 189 12 chr18 25440397 25440834 -61236714 - L2 LINE L2 -254 3059 2556 12505 199 43 39 chr18 25440949 25441078 -61236470 - L1PB2 LINE L1 -1 6150 6023 2327 73 0 32 chr18 25441078 25441391 -61236157 - AluSx SINE Alu -9 303 1 12505 199 43 39 chr18 25441391 25444738 -61232810 - L1PB2 LINE L1 -128 6023 2685 4352 65 0 25 chr18 25444738 25445231 -61232317 + MER41A LTR ERV1 1 480 -74 2074 81 4 0 chr18 25445231 25445502 -61232046 - AluY SINE Alu -39 272 1 4352 65 0 25 chr18 25445502 25445576 -61231972 + MER41A LTR ERV1 480 554 0 12505 199 43 39 chr18 25445576 25446494 -61231054 - L1PB2 LINE L1 -3466 2685 1772 486 108 72 0 chr18 25446489 25446572 -61230976 + L1PBa LINE L1 2328 2416 -4447 * 309 213 13 0 chr18 25446696 25446771 -61230777 + L1ME LINE L1 5571 5646 -475 202 208 42 97 chr18 25447336 25447408 -61230140 - L3 LINE CR1 -7 1570 1503 619 236 0 67 chr18 25447696 25447874 -61229674 - AluSg/x SINE Alu -33 279 114 439 189 28 9 chr18 25448391 25448497 -61229051 + L1MB7 LINE L1 6053 6160 -24 2347 72 0 19 chr18 25448804 25449111 -61228437 + AluY SINE Alu 1 301 -10 730 163 46 13 chr18 25449221 25449374 -61228174 - THE1C LTR MaLR -217 158 1 284 192 50 8 chr18 25449411 25449531 -61228017 + (TA)n Simple_repeat Simple_repeat 2 126 0 1915 97 14 4 chr18 25449548 25449866 -61227682 - AluSg SINE Alu 0 321 1 2106 133 0 10 chr18 25449866 25450173 -61227375 - AluSx SINE Alu -7 305 1 897 143 7 7 chr18 25450283 25450430 -61227118 + MER1B DNA MER1_type 1 147 -150 778 165 31 0 chr18 25450768 25450895 -61226653 - FLAM_C SINE Alu -2 131 1 2134 116 33 0 chr18 25451940 25452241 -61225307 - AluSx SINE Alu -1 311 1 2119 133 3 0 chr18 25452258 25452552 -61224996 - AluSx SINE Alu -17 295 1 1978 108 19 77 chr18 25452878 25453203 -61224345 - AluY SINE Alu -5 306 1 278 267 29 19 chr18 25453250 25453355 -61224193 - L1M4 LINE L1 -1252 4894 4789 324 333 16 8 chr18 25453355 25453481 -61224067 - L2 LINE L2 -212 3060 2934 1519 163 35 10 chr18 25453535 25453848 -61223700 + MER33 DNA MER1_type 1 321 -3 876 209 6 0 chr18 25453942 25454100 -61223448 + FRAM SINE Alu 1 157 -19 2320 95 7 0 chr18 25454116 25454411 -61223137 + AluSx SINE Alu 6 302 -10 30 59 0 0 chr18 25454480 25454531 -61223017 + AT_rich Low_complexity Low_complexity 1 51 0 21 71 0 0 chr18 25454747 25454789 -61222759 + AT_rich Low_complexity Low_complexity 1 42 0 1282 71 0 3 chr18 25455329 25455567 -61221981 - AluSq SINE Alu -14 299 1 2341 89 3 0 chr18 25455644 25455935 -61221613 - AluSc SINE Alu -17 292 1 235 234 149 56 chr18 25455994 25456101 -61221447 - L2 LINE L2 -36 3277 3161 2751 7 0 0 chr18 25456241 25456538 -61221010 - AluY SINE Alu -13 298 2 1367 215 13 29 chr18 25456625 25456937 -61220611 - MER82 DNA MER2_type 0 653 347 2277 106 0 31 chr18 25456937 25457259 -61220289 + AluSx SINE Alu 1 312 0 243 0 0 0 chr18 25457381 25457408 -61220140 + (A)n Simple_repeat Simple_repeat 1 27 0 1531 186 84 3 chr18 25457408 25457742 -61219806 - MER82 DNA MER2_type -292 361 1 1677 172 0 4 chr18 25459920 25460182 -61217366 - AluJo SINE Alu -46 266 6 1118 222 22 9 chr18 25460209 25460439 -61217109 - MIR SINE MIR -22 240 8 214 275 29 29 chr18 25460729 25460798 -61216750 - MIR SINE MIR -10 252 184 262 280 40 20 chr18 25461127 25461227 -61216321 + L2 LINE L2 3204 3305 -8 393 221 126 39 chr18 25461460 25461587 -61215961 + L1ME3A LINE L1 6023 6160 -10 2620 224 47 64 chr18 25461816 25462221 -61215327 + L1MC4 LINE L1 7077 7488 -554 1679 162 0 34 chr18 25462221 25462352 -61215196 + AluJo SINE Alu 14 148 -164 673 11 0 23 chr18 25462352 25462440 -61215108 + (CATAA)n Simple_repeat Simple_repeat 5 90 0 1679 162 0 34 chr18 25462440 25462604 -61214944 + AluJo SINE Alu 148 299 -13 2620 224 47 64 chr18 25462604 25463079 -61214469 + L1MC4 LINE L1 7488 8023 -19 2280 98 3 28 chr18 25463079 25463397 -61214151 - AluY SINE Alu -1 310 1 2620 224 47 64 chr18 25463397 25463417 -61214131 + L1MC4 LINE L1 8023 8042 0 249 291 60 22 chr18 25463593 25463727 -61213821 - L3 LINE CR1 -271 1306 1168 2149 129 0 0 chr18 25463727 25464029 -61213519 - AluSg SINE Alu -8 302 1 2069 97 8 0 chr18 25464031 25464289 -61213259 - AluSq SINE Alu -53 260 1 297 255 20 39 chr18 25464530 25464632 -61212916 - L3 LINE CR1 -717 860 761 23 33 0 0 chr18 25464983 25465013 -61212535 + AT_rich Low_complexity Low_complexity 1 30 0 892 118 0 16 chr18 25465410 25465537 -61212011 + AluJo/FLAM SINE Alu 3 127 -185 2054 106 11 4 chr18 25465540 25465814 -61211734 + AluSq SINE Alu 1 276 -37 1577 185 0 38 chr18 25466037 25466324 -61211224 - AluJb SINE Alu -36 276 1 510 129 106 15 chr18 25468055 25468187 -61209361 + L1M4 LINE L1 5188 5331 -815 4054 213 34 8 chr18 25468189 25469208 -61208340 + L1M4 LINE L1 4342 5387 -759 1858 130 0 11 chr18 25469209 25469471 -61208077 + AluSx SINE Alu 25 283 -29 1917 142 7 29 chr18 25469823 25470132 -61207416 - AluJb SINE Alu -10 302 1 21 0 0 0 chr18 25470142 25470163 -61207385 + AT_rich Low_complexity Low_complexity 1 21 0 2241 113 3 0 chr18 25470419 25470711 -61206837 + AluSx SINE Alu 1 293 -19 23 0 0 0 chr18 25470733 25470756 -61206792 + AT_rich Low_complexity Low_complexity 1 23 0 254 262 301 6 chr18 25470764 25470947 -61206601 + L2 LINE L2 3031 3267 -46 2503 156 28 34 chr18 25471307 25471749 -61205799 - L1MB7 LINE L1 0 6184 5744 1706 140 7 55 chr18 25471749 25472056 -61205492 - AluJo SINE Alu -10 302 11 2503 156 28 34 chr18 25472056 25472107 -61205441 - L1MB7 LINE L1 -440 5744 5694 2144 99 0 30 chr18 25472199 25472501 -61205047 - AluSx SINE Alu -19 293 1 2332 108 0 0 chr18 25472578 25472883 -61204665 + AluSg SINE Alu 1 305 -5 595 174 25 37 chr18 25473314 25473475 -61204073 - MIR SINE MIR 0 262 104 2283 112 7 3 chr18 25473507 25473810 -61203738 + AluSx SINE Alu 1 304 -8 784 248 75 44 chr18 25473861 25473902 -61203646 + HAL1 LINE L1 741 779 -1728 1749 190 3 0 chr18 25473902 25474197 -61203351 + AluJb SINE Alu 1 296 -16 784 248 75 44 chr18 25474197 25474542 -61203006 + HAL1 LINE L1 779 1139 -1368 1252 239 53 8 chr18 25474565 25474992 -61202556 + MLT1E3 LTR MaLR 139 621 -3 866 221 127 85 chr18 25475065 25475467 -61202081 + MLT1J LTR MaLR 64 482 -29 702 186 0 0 chr18 25475489 25475607 -61201941 - FLAM_C SINE Alu -24 119 2 2083 217 67 94 chr18 25475633 25476082 -61201466 + HAL1 LINE L1 1446 1906 -601 1774 181 3 13 chr18 25476082 25476397 -61201151 + AluSx SINE Alu 1 312 0 2083 217 67 94 chr18 25476397 25476539 -61201009 + HAL1 LINE L1 1906 2050 -457 2023 141 0 0 chr18 25476539 25476856 -61200692 - AluSq SINE Alu 0 317 1 2083 217 67 94 chr18 25476856 25477047 -61200501 + HAL1 LINE L1 2050 2245 -262 1934 140 20 0 chr18 25477047 25477340 -61200208 + AluJb SINE Alu 6 304 -8 2083 217 67 94 chr18 25477340 25477423 -61200125 + HAL1 LINE L1 2245 2286 -221 7856 21 1 0 chr18 25477423 25479094 -61198454 + L1PA4 LINE L1 4482 6152 -3 2083 217 67 94 chr18 25479094 25479214 -61198334 + HAL1 LINE L1 2286 2408 -99 731 262 44 47 chr18 25479255 25479553 -61197995 + L1MCc LINE L1 877 1173 -5250 304 271 68 55 chr18 25479558 25479794 -61197754 + L1MCc LINE L1 1577 1815 -5126 1010 299 61 38 chr18 25479832 25480251 -61197297 - HERV16 LTR ERVL -3429 1567 1133 2090 107 3 13 chr18 25480251 25480551 -61196997 + AluSg SINE Alu 14 310 0 1010 299 61 38 chr18 25480551 25480636 -61196912 - HERV16 LTR ERVL -3863 1133 1051 2278 118 0 3 chr18 25480719 25481032 -61196516 + AluSx SINE Alu 1 312 0 1314 111 0 0 chr18 25481038 25481209 -61196339 + AluSg/x SINE Alu 129 299 -13 2158 286 55 18 chr18 25481209 25481933 -61195615 + HERV16 LTR ERVL 1719 2469 -2527 557 166 210 56 chr18 25482111 25482370 -61195178 - MER4C LTR ERV1 0 465 158 1169 150 208 34 chr18 25482376 25482670 -61194878 - MER4A LTR ERV1 -319 345 1 989 295 40 43 chr18 25482670 25483016 -61194532 + HERV16 LTR ERVL 2735 3079 -1917 496 239 84 40 chr18 25483298 25483524 -61194024 + LTR16A LTR ERVL 202 437 -13 1069 128 44 28 chr18 25483770 25483950 -61193598 - AluJo SINE Alu -25 287 105 1843 163 0 3 chr18 25483951 25484233 -61193315 + AluJb SINE Alu 1 281 -31 225 108 0 0 chr18 25484235 25484272 -61193276 + (GA)n Simple_repeat Simple_repeat 2 38 0 661 193 0 0 chr18 25484289 25484403 -61193145 - FLAM_A SINE Alu -19 114 1 1384 187 83 14 chr18 25484433 25484722 -61192826 + AluJo SINE Alu 1 309 -3 2298 91 0 10 chr18 25484975 25485282 -61192266 - AluSq SINE Alu -4 309 6 3040 165 37 19 chr18 25485606 25486048 -61191500 + MER6A DNA MER2_type 1 458 -407 1733 194 10 0 chr18 25486048 25486342 -61191206 - AluJo SINE Alu -14 298 2 3040 165 37 19 chr18 25486342 25486493 -61191055 + MER6A DNA MER2_type 458 605 0 1785 121 73 17 chr18 25486747 25487036 -61190512 + AluSx SINE Alu 1 305 -7 1096 196 89 43 chr18 25488154 25488434 -61189114 - MLT1D LTR MaLR -5 500 208 1249 152 0 0 chr18 25488451 25488642 -61188906 - AluSg/x SINE Alu 0 312 122 1845 148 27 3 chr18 25488657 25488954 -61188594 - AluJb SINE Alu -8 304 1 846 189 0 92 chr18 25488954 25489160 -61188388 - MLT1D LTR MaLR -317 188 1 758 200 8 0 chr18 25489491 25489621 -61187927 + FLAM_A SINE Alu 1 131 -2 25 0 0 0 chr18 25489621 25489646 -61187902 + AT_rich Low_complexity Low_complexity 1 25 0 1848 143 33 16 chr18 25489756 25490063 -61187485 + AluJb SINE Alu 1 312 0 357 195 65 0 chr18 25490082 25490159 -61187389 + L1MB7 LINE L1 4843 4924 -1222 * 1368 197 55 36 chr18 25490149 25490319 -61187229 + L1MB7 LINE L1 5754 5919 -265 2274 112 3 0 chr18 25490319 25490615 -61186933 + AluSx SINE Alu 1 297 -15 1368 197 55 36 chr18 25490615 25490809 -61186739 + L1MB7 LINE L1 5919 6125 -59 3576 176 73 13 chr18 25490832 25491574 -61185974 - MER21B LTR ERV1 -21 842 1 222 297 16 0 chr18 25491643 25491707 -61185841 + L3 LINE CR1 1433 1497 -80 645 185 9 0 chr18 25492137 25492245 -61185303 + FLAM_A SINE Alu 6 114 -28 207 100 0 0 chr18 25492245 25492275 -61185273 + (TA)n Simple_repeat Simple_repeat 1 30 0 2044 137 3 13 chr18 25492376 25492682 -61184866 + AluJb SINE Alu 1 303 -9 268 241 25 6 chr18 25492786 25492894 -61184654 - HsTC2 DNA Tc2 -68 1830 2 707 119 249 7 chr18 25493868 25494147 -61183401 + MSTA LTR MaLR 1 427 -1 1743 181 3 0 chr18 25494956 25495254 -61182294 + AluJo SINE Alu 1 299 -13 1948 153 0 3 chr18 25495690 25495985 -61181563 - AluJb SINE Alu -18 294 1 2030 154 3 0 chr18 25497010 25497321 -61180227 + AluJo SINE Alu 1 312 0 2842 201 80 28 chr18 25497762 25497798 -61179750 + MER99 DNA DNA 37 70 -758 2172 114 3 10 chr18 25497798 25498097 -61179451 + AluSx SINE Alu 1 297 -15 2842 201 80 28 chr18 25498097 25498812 -61178736 + MER99 DNA DNA 70 827 -1 30 27 0 0 chr18 25499143 25499180 -61178368 + AT_rich Low_complexity Low_complexity 1 37 0 2092 155 0 0 chr18 25500049 25500359 -61177189 + AluJo SINE Alu 1 310 -2 277 358 86 30 chr18 25500533 25500801 -61176747 + L2 LINE L2 2942 3224 -48 1371 98 57 0 chr18 25500862 25501056 -61176492 - LTR12 LTR ERV1 -133 581 377 340 224 31 20 chr18 25501057 25501155 -61176393 - LTR30 LTR ERV1 -80 642 544 4551 141 58 76 chr18 25501155 25502168 -61175380 - pTR5 LTR ERV1 -413 2025 741 290 173 0 0 chr18 25502756 25502808 -61174740 + MIR SINE MIR 91 142 -66 533 220 37 173 chr18 25503204 25503653 -61173895 + L1ME4a LINE L1 5383 5771 -437 2202 227 207 29 chr18 25503751 25504254 -61173294 + HAL1 LINE L1 579 991 -1516 2190 130 0 0 chr18 25504254 25504553 -61172995 + AluSx SINE Alu 1 299 -13 2202 227 207 29 chr18 25504553 25504639 -61172909 + HAL1 LINE L1 991 1060 -1447 1677 120 15 27 chr18 25504639 25504898 -61172650 + AluSx SINE Alu 38 293 -19 2202 227 207 29 chr18 25504898 25505389 -61172159 + HAL1 LINE L1 1060 1853 -654 2322 119 0 0 chr18 25505686 25505997 -61171551 + AluSq SINE Alu 1 311 -2 2701 119 105 2 chr18 25506054 25506492 -61171056 - MER31A LTR ERV1 -2 483 1 2182 118 0 10 chr18 25506692 25507006 -61170542 + AluSx SINE Alu 1 311 -1 1135 139 28 74 chr18 25507073 25507135 -61170413 + AluJb SINE Alu 85 148 -164 2267 87 7 29 chr18 25507135 25507444 -61170104 + AluY SINE Alu 1 302 -9 1135 139 28 74 chr18 25507444 25507596 -61169952 + AluJb SINE Alu 148 289 -23 25 0 0 0 chr18 25507596 25507621 -61169927 + AT_rich Low_complexity Low_complexity 1 25 0 1746 141 18 18 chr18 25507641 25507924 -61169624 + AluJb SINE Alu 30 312 0 407 260 61 44 chr18 25507981 25508162 -61169386 + L1ME4a LINE L1 5934 6117 -4 2083 134 7 0 chr18 25508492 25508791 -61168757 + AluSc SINE Alu 1 301 -8 306 295 194 0 chr18 25508868 25508997 -61168551 - L2 LINE L2 -4 3268 3115 1976 139 20 0 chr18 25509308 25509602 -61167946 + AluSx SINE Alu 1 300 -12 2267 92 6 16 chr18 25509603 25509919 -61167629 + AluSq SINE Alu 1 313 0 2449 71 0 7 chr18 25509975 25510272 -61167276 - AluY SINE Alu -16 295 1 815 187 0 0 chr18 25510292 25510431 -61167117 + FRAM SINE Alu 30 168 -8 1605 184 14 3 chr18 25511696 25511979 -61165569 + AluJo SINE Alu 1 286 -26 34 89 0 0 chr18 25511980 25512070 -61165478 + AT_rich Low_complexity Low_complexity 1 90 0 1741 126 12 12 chr18 25512116 25512371 -61165177 - AluJb SINE Alu -57 255 1 787 167 8 16 chr18 25512604 25512730 -61164818 - FLAM_C SINE Alu -8 125 1 218 336 67 25 chr18 25512988 25513107 -61164441 - L2 LINE L2 -24 3289 3166 385 267 82 22 chr18 25513219 25513354 -61164194 + L2 LINE L2 3161 3303 -10 183 80 0 0 chr18 25513356 25513381 -61164167 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 2333 102 0 13 chr18 25513531 25513845 -61163703 + AluSq SINE Alu 2 311 -2 1964 140 0 3 chr18 25514675 25514986 -61162562 + AluSx SINE Alu 1 310 0 1208 152 143 6 chr18 25515182 25515431 -61162117 + L1MB3 LINE L1 5542 5798 -356 2114 121 10 13 chr18 25515431 25515738 -61161810 + AluSx SINE Alu 5 310 -2 1208 152 143 6 chr18 25515738 25515771 -61161777 + L1MB3 LINE L1 5798 5825 -329 2015 119 0 7 chr18 25515833 25516119 -61161429 + AluSx SINE Alu 1 284 -28 1831 162 3 15 chr18 25516126 25516453 -61161095 + L1MB3 LINE L1 5818 6140 -43 1554 165 0 29 chr18 25516455 25516734 -61160814 + AluJo SINE Alu 1 271 -41 2556 60 0 0 chr18 25516874 25517175 -61160373 - AluY SINE Alu -10 301 1 810 187 0 0 chr18 25517195 25517334 -61160214 + FRAM SINE Alu 30 168 -8 224 280 75 63 chr18 25517336 25517749 -61159799 - L2 LINE L2 -1069 2245 1776 1861 158 11 0 chr18 25518599 25518883 -61158665 + AluJo SINE Alu 1 287 -25 35 88 0 0 chr18 25518884 25518975 -61158573 + AT_rich Low_complexity Low_complexity 1 91 0 1718 126 12 12 chr18 25519021 25519276 -61158272 - AluJb SINE Alu -57 255 1 787 167 8 16 chr18 25519509 25519635 -61157913 - FLAM_C SINE Alu -8 125 1 218 336 67 25 chr18 25519893 25520012 -61157536 - L2 LINE L2 -24 3289 3166 385 267 82 22 chr18 25520124 25520259 -61157289 + L2 LINE L2 3161 3303 -10 183 80 0 0 chr18 25520261 25520286 -61157262 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 2312 98 0 13 chr18 25520438 25520743 -61156805 + AluSq SINE Alu 2 302 -11 1964 140 0 3 chr18 25521580 25521891 -61155657 + AluSx SINE Alu 1 310 0 1208 152 143 6 chr18 25522087 25522336 -61155212 + L1MB3 LINE L1 5542 5798 -356 2178 112 7 13 chr18 25522336 25522641 -61154907 + AluSx SINE Alu 5 307 -5 1208 152 143 6 chr18 25522641 25522674 -61154874 + L1MB3 LINE L1 5798 5825 -329 2015 119 0 7 chr18 25522736 25523022 -61154526 + AluSx SINE Alu 1 284 -28 1101 153 0 0 chr18 25523029 25523206 -61154342 + L1MB3 LINE L1 5818 5994 -189 1336 128 0 0 chr18 25523206 25523385 -61154163 - AluJb SINE Alu -133 179 1 2246 90 14 0 chr18 25523398 25523688 -61153860 - AluSp SINE Alu -19 294 1 1861 164 3 0 chr18 25523932 25524219 -61153329 - AluJo SINE Alu -24 288 1 206 319 28 0 chr18 25524390 25524462 -61153086 + (CATATA)n Simple_repeat Simple_repeat 1 74 0 242 271 84 28 chr18 25524533 25524640 -61152908 - MIR3 SINE MIR -42 166 54 2441 74 0 3 chr18 25524672 25524981 -61152567 - AluY SINE Alu -2 309 2 2298 98 0 3 chr18 25526845 25527151 -61150397 - AluSq SINE Alu -8 305 1 2276 86 0 16 chr18 25527178 25527481 -61150067 + AluSg SINE Alu 12 309 -1 227 242 242 0 chr18 25527809 25527908 -61149640 + L2 LINE L2 2226 2348 -966 1941 189 33 35 chr18 25528158 25528555 -61148993 - MSTD LTR MaLR 0 396 1 190 303 56 34 chr18 25528748 25528837 -61148711 + L2 LINE L2 3163 3253 -19 795 165 0 8 chr18 25528931 25529052 -61148496 - AluJb SINE Alu -11 301 182 273 106 0 21 chr18 25529053 25529100 -61148448 - AluSp SINE Alu -172 131 86 2402 80 0 13 chr18 25529342 25529653 -61147895 - AluY SINE Alu -4 307 1 856 224 50 55 chr18 25530208 25530427 -61147121 - AluJo SINE Alu -30 282 65 1054 119 119 16 chr18 25530448 25530642 -61146906 - Tigger3(Golem) DNA MER2_type -57 2972 69 1253 172 31 18 chr18 25530740 25530967 -61146581 - AluJo SINE Alu -78 234 5 240 320 222 51 chr18 25531798 25532267 -61145281 + L2 LINE L2 2331 2879 -435 531 244 192 0 chr18 25532958 25533107 -61144441 + MER5A DNA MER1_type 4 185 -4 861 303 89 39 chr18 25533110 25533369 -61144179 + LTR16B LTR ERVL 1 292 -172 1832 152 13 7 chr18 25533369 25533671 -61143877 - AluJo SINE Alu -1 311 8 861 303 89 39 chr18 25533671 25533850 -61143698 + LTR16B LTR ERVL 292 461 -3 1426 192 176 3 chr18 25533897 25534215 -61143333 + MER93b LTR ERV1 1 373 0 2235 92 31 0 chr18 25534675 25534968 -61142580 + AluSx SINE Alu 1 302 -10 1939 131 0 4 chr18 25535232 25535506 -61142042 + AluJb SINE Alu 20 292 -20 219 36 0 0 chr18 25535950 25535978 -61141570 + (TG)n Simple_repeat Simple_repeat 2 29 0 1859 143 7 0 chr18 25535979 25536252 -61141296 - AluSx SINE Alu -37 275 1 2049 145 10 0 chr18 25536252 25536555 -61140993 - AluSx SINE Alu -6 306 1 965 199 68 14 chr18 25536666 25536955 -61140593 - LTR48B LTR ERV1 0 644 386 1856 136 18 3 chr18 25537005 25537291 -61140257 + AluSg SINE Alu 5 294 -16 248 170 19 0 chr18 25537291 25537344 -61140204 + (TA)n Simple_repeat Simple_repeat 1 54 0 347 292 0 0 chr18 25537351 25537440 -61140108 - L1MC4 LINE L1 -1339 6703 6615 1534 206 17 3 chr18 25537655 25537947 -61139601 - AluJo SINE Alu -16 296 1 22 0 0 0 chr18 25537948 25537970 -61139578 + AT_rich Low_complexity Low_complexity 1 22 0 808 224 61 10 chr18 25538236 25538432 -61139116 - MER67D LTR ERV1 -8 506 301 1514 154 30 91 chr18 25538469 25538800 -61138748 - MER67D LTR ERV1 -203 311 1 264 116 47 0 chr18 25538831 25538874 -61138674 + MIR SINE MIR 107 151 -111 1600 192 45 7 chr18 25538920 25539211 -61138337 - AluJo SINE Alu -10 302 1 1987 153 0 6 chr18 25539214 25539528 -61138020 - AluSx SINE Alu 0 312 1 498 356 21 38 chr18 25539847 25540083 -61137465 + MIR SINE MIR 31 262 0 241 191 0 0 chr18 25542330 25542372 -61135176 + Alu SINE Alu 1 42 -261 1151 113 0 6 chr18 25542380 25542540 -61135008 + AluSg/x SINE Alu 149 307 -5 338 229 72 72 chr18 25543213 25543449 -61134099 + LTR16A1 LTR ERVL 190 425 -32 2323 119 0 0 chr18 25543811 25544123 -61133425 - AluSx SINE Alu 0 312 1 740 144 16 8 chr18 25545284 25545409 -61132139 + L1MB3 LINE L1 6058 6183 0 1162 315 53 33 chr18 25545651 25545719 -61131829 - MLT1G1 LTR MaLR 0 595 530 2083 149 3 0 chr18 25545719 25546021 -61131527 + AluSx SINE Alu 1 303 -9 1162 315 53 33 chr18 25546021 25546463 -61131085 - MLT1G1 LTR MaLR -65 530 75 464 285 38 112 chr18 25547156 25547363 -61130185 + L1MC4 LINE L1 7307 7479 -563 976 204 20 5 chr18 25547363 25547559 -61129989 - MER105 DNA DNA -2 202 4 464 285 38 112 chr18 25547559 25547698 -61129850 + L1MC4 LINE L1 7479 7627 -415 * 1437 241 48 22 chr18 25547696 25548153 -61129395 - L1ME3 LINE L1 -193 5969 5501 486 217 39 100 chr18 25548165 25548345 -61129203 + L1ME3 LINE L1 5987 6155 -7 799 246 39 114 chr18 25548360 25548823 -61128725 + L1MC4 LINE L1 7615 8042 0 29 60 0 0 chr18 25550321 25550371 -61127177 + AT_rich Low_complexity Low_complexity 1 50 0 278 184 13 0 chr18 25550405 25550481 -61127067 + (TA)n Simple_repeat Simple_repeat 1 77 0 300 319 11 0 chr18 25550482 25550573 -61126975 + L1MC4 LINE L1 6613 6704 -1338 536 213 27 0 chr18 25550574 25550989 -61126559 + (TA)n Simple_repeat Simple_repeat 1 426 0 2225 109 0 0 chr18 25551796 25552090 -61125458 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr18 25552258 25552279 -61125269 + AT_rich Low_complexity Low_complexity 1 21 0 1894 149 27 0 chr18 25552482 25552604 -61124944 + AluJb SINE Alu 1 118 -194 294 29 0 0 chr18 25552604 25552639 -61124909 + (CA)n Simple_repeat Simple_repeat 2 36 0 1894 149 27 0 chr18 25552639 25552811 -61124737 + AluJb SINE Alu 118 303 -9 1683 124 17 33 chr18 25553321 25553620 -61123928 + AluSx SINE Alu 5 298 -14 288 0 0 0 chr18 25553774 25553806 -61123742 + (TG)n Simple_repeat Simple_repeat 2 33 0 1819 121 77 0 chr18 25554326 25554638 -61122910 - AluJb SINE Alu 0 335 3 186 71 0 0 chr18 25554641 25554669 -61122879 + (ATTTG)n Simple_repeat Simple_repeat 3 30 0 255 405 8 0 chr18 25554775 25554901 -61122647 + MIR SINE MIR 1 127 -135 1168 190 186 75 chr18 25556414 25556866 -61120682 - MLT1H LTR MaLR -2 547 46 1083 168 82 5 chr18 25557004 25557200 -61120348 - AluJb SINE Alu -16 296 86 315 305 74 21 chr18 25557204 25557394 -61120154 + MLT1K LTR MaLR 39 238 -350 262 294 15 0 chr18 25557874 25557942 -61119606 - Charlie8 DNA MER1_type -2206 211 143 2162 138 0 0 chr18 25558322 25558634 -61118914 + AluSx SINE Alu 1 312 0 325 341 76 27 chr18 25558750 25558976 -61118572 + LTR50 LTR ERVL 3 216 -307 417 210 0 0 chr18 25559255 25559336 -61118212 + LTR33A LTR ERVL 441 521 -2 2179 99 3 30 chr18 25559488 25559790 -61117758 + AluSx SINE Alu 1 294 -18 2247 117 0 0 chr18 25559853 25560161 -61117387 + AluSx SINE Alu 1 308 -4 2244 128 150 5 chr18 25560530 25560904 -61116644 + MSTA LTR MaLR 1 428 0 187 340 0 0 chr18 25561104 25561154 -61116394 - L2 LINE L2 -9 3263 3214 436 233 26 95 chr18 25561363 25561496 -61116052 + MER104 DNA Tc2 2 120 -1778 2605 102 28 25 chr18 25561496 25561859 -61115689 + THE1B LTR MaLR 1 364 0 436 233 26 95 chr18 25561859 25561914 -61115634 + MER104 DNA Tc2 120 177 -3 25 0 0 0 chr18 25561915 25561940 -61115608 + AT_rich Low_complexity Low_complexity 1 25 0 822 201 0 6 chr18 25562465 25562624 -61114924 + AluJb SINE Alu 134 291 -21 825 154 0 23 chr18 25562815 25562945 -61114603 + FLAM_C SINE Alu 9 135 -8 1372 152 0 0 chr18 25562947 25563151 -61114397 + AluSg/x SINE Alu 85 288 -24 32 0 0 0 chr18 25563153 25563185 -61114363 + AT_rich Low_complexity Low_complexity 1 32 0 1189 192 0 9 chr18 25563190 25563401 -61114147 + AluJo SINE Alu 85 295 -17 1787 98 109 4 chr18 25563401 25563666 -61113882 - AluSc SINE Alu -16 293 1 1189 192 0 9 chr18 25563666 25563678 -61113870 + AluJo SINE Alu 295 306 -6 21 0 0 0 chr18 25563678 25563699 -61113849 + AT_rich Low_complexity Low_complexity 1 21 0 329 228 5 193 chr18 25565716 25565918 -61111630 - MER112 DNA MER1_type -96 164 1 2194 125 6 6 chr18 25566042 25566355 -61111193 - AluSq SINE Alu 0 313 1 237 65 0 0 chr18 25566426 25566457 -61111091 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 1621 187 14 7 chr18 25566457 25566735 -61110813 - AluJb SINE Alu -32 280 1 2053 104 17 0 chr18 25567097 25567385 -61110163 + AluSc SINE Alu 1 293 -16 21 0 0 0 chr18 25567656 25567677 -61109871 + AT_rich Low_complexity Low_complexity 1 21 0 2079 204 44 20 chr18 25568334 25568790 -61108758 + MLT1C LTR MaLR 1 467 0 2320 88 0 0 chr18 25568909 25569206 -61108342 - AluSx SINE Alu -10 302 6 2234 123 0 0 chr18 25569738 25570047 -61107501 + AluSx SINE Alu 1 309 -3 201 39 0 0 chr18 25570450 25570476 -61107072 + (T)n Simple_repeat Simple_repeat 1 26 0 471 253 73 94 chr18 25570701 25570946 -61106602 - L1ME LINE L1 -437 5684 5445 236 280 186 17 chr18 25570946 25571064 -61106484 + L2 LINE L2 2211 2348 -966 1941 189 33 35 chr18 25571314 25571711 -61105837 - MSTD LTR MaLR 0 396 1 191 288 55 41 chr18 25571904 25571977 -61105571 + L2 LINE L2 3163 3236 -36 810 163 0 8 chr18 25572086 25572209 -61105339 - AluJb SINE Alu -9 303 182 273 106 0 21 chr18 25572210 25572257 -61105291 - AluSp SINE Alu -172 131 86 2402 80 0 13 chr18 25572499 25572810 -61104738 - AluY SINE Alu -4 307 1 1534 169 37 37 chr18 25573349 25573645 -61103903 - AluJb SINE Alu -16 296 1 305 301 34 74 chr18 25573668 25573844 -61103704 + L3 LINE CR1 1404 1572 -5 1207 142 46 0 chr18 25574849 25575068 -61102480 - AluJb SINE Alu 0 312 87 2028 147 6 10 chr18 25575099 25575412 -61102136 + AluJb SINE Alu 1 312 0 249 295 0 0 chr18 25575682 25575743 -61101805 + LTR67 LTR ERVL 483 543 -14 1126 126 120 11 chr18 25576834 25577017 -61100531 - MER3 DNA MER1_type 0 209 7 1980 134 53 0 chr18 25577415 25577698 -61099850 + AluSq SINE Alu 1 298 -15 1476 123 84 53 chr18 25578156 25578440 -61099108 + AluJb SINE Alu 11 303 -9 340 237 199 74 chr18 25578934 25579271 -61098277 - L1M2 LINE L1 -5595 1254 876 2237 104 0 19 chr18 25580694 25581010 -61096538 - AluSx SINE Alu -2 310 1 409 196 0 75 chr18 25581011 25581118 -61096430 + MER112 DNA MER1_type 153 251 -9 641 276 57 63 chr18 25581225 25581491 -61096057 + MLT1J1 LTR MaLR 8 271 -175 986 254 4 22 chr18 25581491 25581528 -61096020 + MER58A DNA MER1_type 1 37 -2383 2225 123 0 0 chr18 25581528 25581836 -61095712 + AluSx SINE Alu 1 308 -4 986 254 4 22 chr18 25581836 25582026 -61095522 + MER58A DNA MER1_type 37 224 0 641 276 57 63 chr18 25582026 25582201 -61095347 + MLT1J1 LTR MaLR 271 446 0 1180 170 0 14 chr18 25582361 25582573 -61094975 + L1PA15 LINE L1 5955 6163 -2 266 211 18 0 chr18 25582591 25582648 -61094900 + L2 LINE L2 3232 3289 -24 1240 130 39 61 chr18 25583754 25583984 -61093564 - MER2 DNA MER2_type 0 345 121 889 131 0 23 chr18 25583984 25584114 -61093434 + AluSq/x SINE Alu 1 127 -186 847 176 0 0 chr18 25584125 25584261 -61093287 - MER2 DNA MER2_type -209 136 1 2286 119 0 0 chr18 25584482 25584794 -61092754 + AluSx SINE Alu 1 312 0 584 362 31 4 chr18 25585076 25585330 -61092218 - MIR SINE MIR 0 262 2 1929 137 0 36 chr18 25585903 25586209 -61091339 + AluJb SINE Alu 1 295 -17 22 0 0 0 chr18 25586209 25586231 -61091317 + AT_rich Low_complexity Low_complexity 1 22 0 927 250 118 58 chr18 25586843 25587011 -61090537 + L2 LINE L2 2818 2975 -338 2210 123 7 3 chr18 25587011 25587320 -61090228 - AluSx SINE Alu 0 312 3 927 250 118 58 chr18 25587320 25587619 -61089929 + L2 LINE L2 2975 3313 0 1431 205 48 61 chr18 25587811 25588206 -61089342 + MLT1B LTR MaLR 1 390 0 207 324 14 0 chr18 25589598 25589669 -61087879 + L2 LINE L2 2201 2272 -1042 21 0 0 0 chr18 25590541 25590562 -61086986 + AT_rich Low_complexity Low_complexity 1 21 0 186 301 14 14 chr18 25590565 25590638 -61086910 - MIR SINE MIR -6 256 184 252 0 0 0 chr18 25591947 25591975 -61085573 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1896 152 0 3 chr18 25591977 25592260 -61085288 - AluSx SINE Alu -30 282 1 5124 243 71 28 chr18 25592298 25593976 -61083572 + L1MEc LINE L1 46 1795 -4601 260 279 15 0 chr18 25594075 25594143 -61083405 - L1ME3A LINE L1 -41 6129 6061 307 250 70 10 chr18 25594145 25594245 -61083303 - L1ME3A LINE L1 -157 6013 5908 1008 119 90 31 chr18 25594407 25594696 -61082852 - THE1C LTR MaLR 0 375 1 2175 120 0 19 chr18 25595042 25595350 -61082198 - AluSx SINE Alu -10 302 1 386 302 77 87 chr18 25595713 25595802 -61081746 + MER21-int LTR ERV1 3452 3540 -651 2220 119 3 0 chr18 25595802 25596096 -61081452 + AluSg SINE Alu 2 296 -14 386 302 77 87 chr18 25596096 25596536 -61081012 + MER21-int LTR ERV1 3540 3976 -215 1441 146 0 0 chr18 25597150 25597363 -61080185 + AluSx SINE Alu 1 213 -99 1708 142 0 8 chr18 25597364 25597617 -61079931 + AluJb SINE Alu 42 292 -20 1080 206 49 38 chr18 25597645 25597989 -61079559 + L1ME4a LINE L1 4922 5269 -877 423 237 145 7 chr18 25597960 25598112 -61079436 + L1MD2 LINE L1 6175 6347 -12 * 2090 110 7 13 chr18 25598113 25598412 -61079136 - AluSq SINE Alu -16 297 1 908 281 52 35 chr18 25598522 25599002 -61078546 + L1ME4a LINE L1 5550 6037 -84 1290 174 128 26 chr18 25599245 25599510 -61078038 + AluJo SINE Alu 1 292 -20 35 71 0 0 chr18 25599853 25599923 -61077625 + AT_rich Low_complexity Low_complexity 1 70 0 21 71 0 0 chr18 25600011 25600053 -61077495 + AT_rich Low_complexity Low_complexity 1 42 0 203 203 17 0 chr18 25601606 25601665 -61075883 + (TA)n Simple_repeat Simple_repeat 2 61 0 201 265 205 24 chr18 25602029 25602112 -61075436 + MIR3 SINE MIR 108 205 -3 243 373 51 17 chr18 25602148 25602266 -61075282 - MIR3 SINE MIR -80 128 7 1896 125 0 18 chr18 25602954 25603233 -61074315 - AluJb SINE Alu -38 274 1 966 268 66 29 chr18 25603404 25603886 -61073662 + HAL1 LINE L1 819 1318 -1189 197 200 0 0 chr18 25605155 25605195 -61072353 - L2 LINE L2 0 3313 3274 199 143 48 0 chr18 25605419 25605461 -61072087 + L2 LINE L2 3269 3312 -1 1407 151 90 29 chr18 25605958 25606236 -61071312 + AluJb SINE Alu 14 308 -4 306 203 108 0 chr18 25606238 25606312 -61071236 + L1ME4a LINE L1 5564 5645 -476 479 251 246 8 chr18 25606369 25606755 -61070793 + L1ME4a LINE L1 5642 6119 -2 229 246 69 92 chr18 25607323 25607453 -61070095 - L2 LINE L2 -211 3061 2935 852 127 204 6 chr18 25607464 25607621 -61069927 + MER53 DNA DNA 1 188 -1 182 325 103 26 chr18 25607936 25608053 -61069495 + MIR3 SINE MIR 83 208 0 641 183 22 51 chr18 25608835 25608972 -61068576 + FLAM_C SINE Alu 1 133 0 27 0 0 0 chr18 25609401 25609428 -61068120 + AT_rich Low_complexity Low_complexity 1 27 0 320 71 0 0 chr18 25609579 25609621 -61067927 + Charlie1 DNA MER1_type 2708 2749 -12 2348 88 7 3 chr18 25609859 25610164 -61067384 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr18 25610792 25610813 -61066735 + AT_rich Low_complexity Low_complexity 1 21 0 1679 138 60 11 chr18 25610891 25611183 -61066365 + AluSx SINE Alu 1 305 0 858 176 8 0 chr18 25611195 25611320 -61066228 + FLAM_A SINE Alu 1 126 -7 2414 194 37 16 chr18 25611948 25612493 -61065055 + L1MC4a LINE L1 6691 7246 -562 317 176 0 0 chr18 25612493 25612544 -61065004 + MLT2D LTR ERVL 1 51 -363 1694 144 6 69 chr18 25612544 25612863 -61064685 - AluSx SINE Alu -13 299 1 1141 275 65 48 chr18 25613199 25613694 -61063854 - LTR33 LTR ERVL 0 521 19 2177 139 35 44 chr18 25613765 25614132 -61063416 - THE1B LTR MaLR 0 364 1 2243 124 0 0 chr18 25614155 25614453 -61063095 + AluSx SINE Alu 1 298 -14 1425 154 77 8 chr18 25614911 25615024 -61062524 + AluJo SINE Alu 5 109 -203 189 0 0 0 chr18 25615024 25615045 -61062503 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1425 154 77 8 chr18 25615045 25615191 -61062357 + AluJo SINE Alu 109 282 -30 2040 143 3 3 chr18 25615194 25615488 -61062060 - AluSx SINE Alu -18 294 1 22 0 0 0 chr18 25615492 25615514 -61062034 + AT_rich Low_complexity Low_complexity 1 22 0 2544 60 0 0 chr18 25615705 25616006 -61061542 + AluY SINE Alu 5 305 -6 1522 209 9 32 chr18 25616459 25616799 -61060749 - MER4D LTR ERV1 -10 893 562 1417 128 59 83 chr18 25616806 25616891 -61060657 - MER49 LTR ERV1 -638 285 199 1923 142 19 19 chr18 25616891 25617202 -61060346 - AluJb SINE Alu -1 311 1 1417 128 59 83 chr18 25617202 25617405 -61060143 - MER49 LTR ERV1 -724 199 4 184 386 33 0 chr18 25617416 25617569 -61059979 + L2 LINE L2 2551 2708 -606 505 335 30 62 chr18 25617597 25618063 -61059485 + L2 LINE L2 2397 2847 -467 226 259 0 0 chr18 25618262 25618316 -61059232 + L2 LINE L2 3193 3246 -26 373 295 38 104 chr18 25618486 25618746 -61058802 - L2 LINE L2 -1 3271 3040 2185 88 11 0 chr18 25618746 25619029 -61058519 - AluSg SINE Alu -22 288 3 373 295 38 104 chr18 25619029 25619134 -61058414 - L2 LINE L2 -232 3040 2930 973 128 11 39 chr18 25619294 25619474 -61058074 + FAM SINE Alu 1 175 0 197 290 28 47 chr18 25619485 25619592 -61057956 - L2 LINE L2 -572 2742 2638 1722 162 25 14 chr18 25619925 25620203 -61057345 - AluJb SINE Alu -30 282 2 477 296 184 29 chr18 25620205 25620694 -61056854 - L2 LINE L2 -1427 1887 1323 2305 113 0 3 chr18 25620939 25621250 -61056298 - AluSx SINE Alu -2 310 1 22 0 0 0 chr18 25621263 25621285 -61056263 + AT_rich Low_complexity Low_complexity 1 22 0 495 157 39 10 chr18 25622142 25622244 -61055304 - MER53 DNA DNA -3 186 82 398 93 0 292 chr18 25622151 25622387 -61055161 + MER53 DNA DNA 23 189 0 * 2226 99 7 0 chr18 25623043 25623335 -61054213 - AluSx SINE Alu -18 294 1 1611 142 20 8 chr18 25623801 25624055 -61053493 + AluSx SINE Alu 1 257 -55 26 88 0 0 chr18 25624059 25624127 -61053421 + AT_rich Low_complexity Low_complexity 1 68 0 520 108 24 0 chr18 25624127 25624210 -61053338 + L1MB8 LINE L1 6088 6172 -6 2194 118 3 0 chr18 25625189 25625478 -61052070 + AluSx SINE Alu 1 290 -22 213 39 0 0 chr18 25625502 25625528 -61052020 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2258 92 0 33 chr18 25625582 25625885 -61051663 - AluY SINE Alu -18 293 1 297 308 15 39 chr18 25626192 25626322 -61051226 - L2 LINE L2 -214 3058 2932 1065 253 63 23 chr18 25626446 25626877 -61050671 + L1ME1 LINE L1 5714 6161 -5 2126 109 6 31 chr18 25628196 25628516 -61049032 - AluSx SINE Alu 0 312 1 5232 97 5 9 chr18 25628965 25629727 -61047821 + L1MA2 LINE L1 5546 6304 0 2702 90 11 16 chr18 25631218 25631595 -61045953 - THE1C LTR MaLR 0 375 1 1039 140 59 32 chr18 25632009 25632195 -61045353 - AluJ SINE Alu -13 299 109 802 122 0 17 chr18 25632258 25632373 -61045175 - AluJ SINE Alu -199 113 1 390 306 58 29 chr18 25632635 25632841 -61044707 + MLT1K LTR MaLR 188 399 -189 1219 231 86 74 chr18 25633432 25633506 -61044042 + MLT2B1 LTR ERVL 3 75 -339 2047 140 7 7 chr18 25633506 25633806 -61043742 - AluSx SINE Alu -12 300 1 2321 114 0 3 chr18 25633814 25634121 -61043427 - AluSx SINE Alu -6 306 1 1219 231 86 74 chr18 25634121 25634501 -61043047 + MLT2B1 LTR ERVL 81 385 -29 300 111 0 0 chr18 25634501 25634546 -61043002 + (TG)n Simple_repeat Simple_repeat 2 46 0 1219 231 86 74 chr18 25634546 25634566 -61042982 + MLT2B1 LTR ERVL 385 403 -11 360 197 40 0 chr18 25635385 25635461 -61042087 - MER116 DNA Mariner -1 79 1 491 310 66 33 chr18 25635918 25636131 -61041417 + MLT1I LTR MaLR 81 300 -109 959 226 113 0 chr18 25636237 25636432 -61041116 + MER58A DNA MER1_type 1 217 -7 1117 209 50 35 chr18 25636440 25636558 -61040990 - MLT1J2 LTR MaLR -187 263 148 1993 171 68 44 chr18 25636558 25637013 -61040535 + MER31B LTR ERV1 1 466 0 1117 209 50 35 chr18 25637013 25637153 -61040395 - MLT1J2 LTR MaLR -302 148 1 1316 239 115 21 chr18 25638330 25638563 -61038985 - MLT1C LTR MaLR -1 466 256 342 0 0 0 chr18 25638563 25638601 -61038947 + (TG)n Simple_repeat Simple_repeat 1 38 0 1316 239 115 21 chr18 25638601 25638793 -61038755 - MLT1C LTR MaLR -211 256 1 460 234 58 58 chr18 25638929 25639069 -61038479 - MIR SINE MIR 0 262 120 4700 163 138 10 chr18 25639069 25639973 -61037575 - LTR28 LTR ERV1 0 1020 1 460 234 58 58 chr18 25639973 25639986 -61037562 - MIR SINE MIR -141 121 109 3574 208 122 52 chr18 25640762 25641463 -61036085 - L1MC4 LINE L1 -14 8028 7211 914 173 0 25 chr18 25641463 25641625 -61035923 - FRAM SINE Alu -8 158 1 3574 208 122 52 chr18 25641625 25642099 -61035449 - L1MC4 LINE L1 -831 7211 6771 193 360 0 0 chr18 25642563 25642652 -61034896 - MIR SINE MIR -3 259 171 570 276 75 49 chr18 25643002 25643468 -61034080 - L1ME4a LINE L1 -5 6116 5602 32 57 0 0 chr18 25643475 25643528 -61034020 + AT_rich Low_complexity Low_complexity 1 53 0 836 190 82 0 chr18 25644402 25644560 -61032988 - MER21B LTR ERV1 -369 494 324 724 156 0 33 chr18 25644783 25644905 -61032643 - FAM SINE Alu -43 142 25 902 281 137 25 chr18 25644946 25645393 -61032155 - L1MC/D LINE L1 -370 5751 5267 206 239 0 30 chr18 25645435 25645502 -61032046 + (TTTG)n Simple_repeat Simple_repeat 2 66 0 280 290 93 12 chr18 25645627 25645789 -61031759 - L1P LINE L1 -1098 5048 4874 2186 129 7 0 chr18 25645819 25646122 -61031426 + AluSx SINE Alu 1 305 -7 2263 112 6 10 chr18 25646418 25646731 -61030817 - AluSx SINE Alu 0 312 1 375 277 54 113 chr18 25646732 25647176 -61030372 - L1MC/D LINE L1 -1548 4598 4181 2049 141 0 7 chr18 25647184 25647489 -61030059 - AluJb SINE Alu -9 303 1 261 323 49 18 chr18 25647489 25647712 -61029836 - L1MC/D LINE L1 -1959 4187 3958 2324 103 0 3 chr18 25647768 25648068 -61029480 - AluSg SINE Alu -11 299 1 23 33 0 0 chr18 25648341 25648371 -61029177 + AT_rich Low_complexity Low_complexity 1 30 0 587 301 44 26 chr18 25648585 25648811 -61028737 - MLT1K LTR MaLR -34 554 325 768 139 74 0 chr18 25648884 25649006 -61028542 - FLAM_C SINE Alu -2 131 1 2284 121 0 0 chr18 25649290 25649595 -61027953 - AluSx SINE Alu -7 305 1 864 193 0 0 chr18 25650617 25650762 -61026786 + AluJb SINE Alu 136 280 -32 208 0 30 30 chr18 25650764 25650797 -61026751 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 380 301 150 12 chr18 25651048 25651221 -61026327 + MIR SINE MIR 60 256 -6 2421 89 0 16 chr18 25651446 25651759 -61025789 + AluSq SINE Alu 1 308 -5 365 312 139 0 chr18 25651852 25652054 -61025494 + MIR SINE MIR 33 262 0 211 275 43 0 chr18 25652777 25652846 -61024702 + L2 LINE L2 3201 3272 0 1874 123 50 73 chr18 25652971 25653352 -61024196 + THE1C LTR MaLR 1 372 -3 312 341 114 20 chr18 25653698 25654190 -61023358 + L2 LINE L2 1812 2349 -965 2378 107 0 0 chr18 25655149 25655457 -61022091 + AluSx SINE Alu 1 308 -4 2126 137 20 52 chr18 25656227 25656630 -61020918 + MLT1B LTR MaLR 1 390 0 21 0 0 0 chr18 25658936 25658957 -61018591 + AT_rich Low_complexity Low_complexity 1 21 0 2253 126 0 0 chr18 25658971 25659280 -61018268 + AluSx SINE Alu 3 311 -1 1041 176 70 5 chr18 25660666 25660853 -61016695 + MER20 DNA MER1_type 17 215 -4 22 0 0 0 chr18 25660869 25660891 -61016657 + AT_rich Low_complexity Low_complexity 1 22 0 361 281 71 32 chr18 25661948 25662152 -61015396 + MIR SINE MIR 16 221 -41 984 175 0 94 chr18 25662795 25663018 -61014530 - AluJo SINE Alu -109 203 2 477 0 0 0 chr18 25665141 25665194 -61012354 + (TTCA)n Simple_repeat Simple_repeat 1 53 0 240 297 99 10 chr18 25665199 25665300 -61012248 - L2 LINE L2 -10 3262 3153 218 221 70 58 chr18 25666084 25666170 -61011378 - L3 LINE CR1 -8 1569 1483 2045 117 7 0 chr18 25666730 25667021 -61010527 - AluSx SINE Alu -19 293 1 496 356 21 38 chr18 25667340 25667576 -61009972 + MIR SINE MIR 31 262 0 303 49 0 0 chr18 25669576 25669617 -61007931 + (TG)n Simple_repeat Simple_repeat 2 42 0 1053 206 28 40 chr18 25669769 25670017 -61007531 - MLT2B1 LTR ERVL -243 277 33 21 0 0 0 chr18 25670308 25670329 -61007219 + AT_rich Low_complexity Low_complexity 1 21 0 1923 141 20 13 chr18 25670336 25670640 -61006908 - AluSx SINE Alu -6 306 1 1823 151 0 20 chr18 25670919 25671218 -61006330 - AluSx SINE Alu -18 294 2 1912 176 101 15 chr18 25671344 25671742 -61005806 + MSTB1 LTR MaLR 1 432 0 227 221 42 11 chr18 25672652 25672747 -61004801 + (TA)n Simple_repeat Simple_repeat 2 99 0 772 249 95 28 chr18 25673153 25673438 -61004110 + MLT1J2 LTR MaLR 147 450 0 1687 170 12 49 chr18 25674006 25674330 -61003218 + AluJb SINE Alu 1 312 0 946 140 7 0 chr18 25675744 25675880 -61001668 + AluSq/x SINE Alu 1 137 -175 782 301 101 64 chr18 25676470 25677153 -61000395 - L1MEd LINE L1 -5030 1089 358 1466 135 0 0 chr18 25677153 25677368 -61000180 + AluSq SINE Alu 85 299 -14 782 301 101 64 chr18 25677368 25677653 -60999895 - L1MEd LINE L1 -5761 358 85 5044 165 23 14 chr18 25677655 25678662 -60998886 + L1MB3 LINE L1 5148 6163 -20 2024 131 0 3 chr18 25678678 25679000 -60998548 - AluSx SINE Alu 0 321 1 357 24 0 0 chr18 25679395 25679437 -60998111 + (TG)n Simple_repeat Simple_repeat 1 42 0 420 263 200 20 chr18 25679465 25679720 -60997828 - L2 LINE L2 0 3313 3013 2113 177 50 21 chr18 25679720 25680196 -60997352 - LTR1B LTR ERV1 -13 772 261 278 310 84 32 chr18 25683259 25683414 -60994134 + MIR3 SINE MIR 3 165 -43 249 372 57 57 chr18 25683420 25683858 -60993690 - L2 LINE L2 -8 3264 2827 2275 107 0 7 chr18 25684373 25684682 -60992866 - AluSx SINE Alu 0 312 6 3161 114 2 7 chr18 25684710 25685156 -60992392 - L1PB3 LINE L1 -2 6152 5709 289 308 111 0 chr18 25685336 25685453 -60992095 - MIR SINE MIR -70 192 63 2153 107 24 0 chr18 25686355 25686644 -60990904 + AluSq SINE Alu 1 296 -17 22 70 0 0 chr18 25686708 25686751 -60990797 + AT_rich Low_complexity Low_complexity 1 43 0 231 254 0 17 chr18 25687412 25687471 -60990077 + CT-rich Low_complexity Low_complexity 1 58 0 251 337 11 0 chr18 25687860 25687955 -60989593 + MIR3 SINE MIR 66 161 -47 1501 191 0 36 chr18 25688830 25689107 -60988441 + AluJo SINE Alu 1 267 -45 2171 160 37 52 chr18 25689129 25689610 -60987938 - MER74A LTR ERVL -84 474 1 730 285 104 39 chr18 25689632 25689660 -60987888 + L2 LINE L2 2439 2464 -849 2351 104 3 0 chr18 25689660 25689967 -60987581 - AluSx SINE Alu -4 308 1 730 285 104 39 chr18 25689967 25690470 -60987078 + L2 LINE L2 2464 3084 -229 768 297 14 5 chr18 25690559 25690768 -60986780 + MIR SINE MIR 8 218 -44 430 290 38 8 chr18 25690788 25690919 -60986629 + L2 LINE L2 3138 3272 0 358 320 20 20 chr18 25691077 25691227 -60986321 + MIR3 SINE MIR 41 190 -18 4422 177 26 48 chr18 25691243 25691950 -60985598 - L1MB7 LINE L1 0 6184 5511 1496 206 85 12 chr18 25691950 25692290 -60985258 + MLT1A1 LTR MaLR 1 365 0 4422 177 26 48 chr18 25692290 25692685 -60984863 - L1MB7 LINE L1 -673 5511 5109 2141 133 0 0 chr18 25692797 25693091 -60984457 + AluSx SINE Alu 1 294 -18 461 313 31 28 chr18 25693212 25693500 -60984048 - L1MC4a LINE L1 -1909 5899 5611 21 57 0 0 chr18 25693591 25693626 -60983922 + AT_rich Low_complexity Low_complexity 1 35 0 278 325 18 18 chr18 25694162 25694325 -60983223 - L1MC4a LINE L1 -1312 4834 4672 270 287 61 41 chr18 25694459 25694678 -60982870 - L1MC4a LINE L1 -1821 4325 4097 1477 181 58 7 chr18 25694678 25694955 -60982593 + AluJo SINE Alu 1 291 -21 270 287 61 41 chr18 25694955 25695028 -60982520 - L1MC4a LINE L1 -2049 4097 4027 207 184 0 0 chr18 25695048 25695086 -60982462 + (CTATA)n Simple_repeat Simple_repeat 5 42 0 1166 309 54 22 chr18 25695086 25695620 -60981928 - MER115 DNA AcHobo -2 691 141 448 260 60 30 chr18 25695665 25695865 -60981683 - L1MC4a LINE L1 -2145 4001 3796 182 340 0 0 chr18 25696574 25696621 -60980927 + L2 LINE L2 3217 3263 -9 378 262 28 55 chr18 25696801 25696946 -60980602 + MER5B DNA MER1_type 27 167 -11 362 299 68 58 chr18 25698041 25698127 -60979421 - MIR SINE MIR -34 228 144 2334 110 0 0 chr18 25698127 25698436 -60979112 - AluSx SINE Alu -3 309 1 362 299 68 58 chr18 25698436 25698556 -60978992 - MIR SINE MIR -118 144 20 294 240 216 76 chr18 25700111 25700282 -60977266 - MLT1J LTR MaLR -316 195 1 293 267 0 38 chr18 25700294 25700399 -60977149 - MER113 DNA MER1_type? -420 101 1 213 39 0 0 chr18 25700773 25700799 -60976749 + (TC)n Simple_repeat Simple_repeat 1 26 0 186 189 0 0 chr18 25700799 25700836 -60976712 + (CA)n Simple_repeat Simple_repeat 2 38 0 219 322 103 0 chr18 25701310 25701397 -60976151 - L2 LINE L2 -8 3264 3169 1003 245 12 25 chr18 25701894 25702135 -60975413 + MIR SINE MIR 15 252 -10 234 0 0 0 chr18 25702406 25702432 -60975116 + (TG)n Simple_repeat Simple_repeat 1 26 0 628 136 36 0 chr18 25702432 25702542 -60975006 - LTR9B LTR ERV1 -86 558 445 1485 91 9 56 chr18 25702792 25703024 -60974524 + AluSg/x SINE Alu 83 303 -7 2008 118 26 13 chr18 25703685 25703998 -60973550 + MER2 DNA MER2_type 1 317 -28 21 36 0 0 chr18 25704345 25704373 -60973175 + AT_rich Low_complexity Low_complexity 1 28 0 1816 114 114 0 chr18 25704374 25704645 -60972903 - AluSx SINE Alu -10 302 1 3350 92 22 4 chr18 25704655 25705114 -60972434 - L1MA3 LINE L1 0 6305 5839 226 288 30 15 chr18 25705241 25705307 -60972241 + MLT1I LTR MaLR 4 70 -339 235 300 14 0 chr18 25705319 25705389 -60972159 - MIR SINE MIR -113 149 79 260 278 14 0 chr18 25705723 25705795 -60971753 + L3b LINE CR1 1296 1368 -215 222 342 79 0 chr18 25705801 25705877 -60971671 - L2 LINE L2 -29 3284 3203 200 239 8 60 chr18 25708626 25708760 -60968788 + (TATAA)n Simple_repeat Simple_repeat 5 131 0 264 289 62 0 chr18 25708776 25708873 -60968675 - L2 LINE L2 0 3313 3211 2217 105 56 137 chr18 25709720 25710186 -60967362 + MSTA LTR MaLR 1 428 0 1314 212 52 64 chr18 25710818 25711353 -60966195 + MLT1E3 LTR MaLR 2 512 -112 293 131 34 32 chr18 25711356 25711422 -60966126 - MLT1E3 LTR MaLR -123 501 403 1217 130 0 22 chr18 25711446 25711631 -60965917 + L1PA11 LINE L1 5994 6174 0 410 174 0 0 chr18 25711644 25711713 -60965835 + MLT1E3 LTR MaLR 555 623 -1 3168 87 41 25 chr18 25712798 25713233 -60964315 + MLT2A1 LTR ERVL 1 442 -2 255 133 0 0 chr18 25713328 25713373 -60964175 + (CA)n Simple_repeat Simple_repeat 2 46 0 281 339 33 51 chr18 25713605 25713879 -60963669 - MLT1I LTR MaLR -114 295 27 312 290 99 15 chr18 25714504 25714635 -60962913 - MIR SINE MIR -119 143 2 231 306 122 10 chr18 25714817 25714915 -60962633 - L3 LINE CR1 -356 1221 1113 1864 158 35 74 chr18 25715802 25716206 -60961342 + MLT1B LTR MaLR 1 388 -2 229 271 0 0 chr18 25717683 25717731 -60959817 + (TCCA)n Simple_repeat Simple_repeat 1 48 0 232 217 0 0 chr18 25717758 25717804 -60959744 - L2 LINE L2 -5 3308 3263 538 286 81 5 chr18 25718377 25718562 -60958986 - MIR SINE MIR -11 251 53 236 230 217 52 chr18 25718867 25719002 -60958546 + MIR SINE MIR 17 168 -67 2159 135 3 0 chr18 25719211 25719515 -60958033 + AluSx SINE Alu 1 305 -7 194 348 139 17 chr18 25720291 25720406 -60957142 - MIR3 SINE MIR -11 197 69 527 240 33 8 chr18 25720649 25720770 -60956778 + L2 LINE L2 3186 3309 -4 180 274 94 60 chr18 25720746 25720863 -60956685 - L2 LINE L2 -10 3303 3183 * 22 0 0 0 chr18 25721541 25721563 -60955985 + AT_rich Low_complexity Low_complexity 1 22 0 200 280 0 0 chr18 25721886 25721936 -60955612 + CT-rich Low_complexity Low_complexity 1 50 0 251 365 35 48 chr18 25721988 25722133 -60955415 - L2 LINE L2 -1 3271 3129 500 355 90 5 chr18 25722143 25722343 -60955205 - MIR SINE MIR -19 243 27 266 284 39 49 chr18 25722418 25722520 -60955028 - L2 LINE L2 -212 3060 2960 631 301 70 16 chr18 25722525 25722781 -60954767 - MLT1I LTR MaLR -69 340 71 258 333 0 12 chr18 25722848 25722932 -60954616 - MIR SINE MIR -95 167 85 334 264 250 0 chr18 25724645 25724789 -60952759 + MER5A DNA MER1_type 10 189 0 2148 116 0 0 chr18 25724881 25725193 -60952355 - AluSx SINE Alu 0 312 1 2369 91 3 0 chr18 25725635 25725944 -60951604 - AluSp SINE Alu -3 310 1 223 292 0 15 chr18 25726161 25726226 -60951322 + GA-rich Low_complexity Low_complexity 5 68 0 1688 153 79 82 chr18 25726284 25726675 -60950873 + MLT1B LTR MaLR 1 390 0 1564 168 5 136 chr18 25727753 25728164 -60949384 + MLT2D LTR ERVL 11 367 -47 298 294 29 10 chr18 25728242 25728344 -60949204 + MIR3 SINE MIR 74 177 -31 264 173 40 53 chr18 25728877 25728952 -60948596 - L1ME4a LINE L1 -70 6051 5978 278 211 53 0 chr18 25729060 25729117 -60948431 + MER91B DNA MER1_type 2 61 -129 760 166 28 10 chr18 25729736 25729878 -60947670 - LTR18A LTR ERVL 0 357 225 1446 181 13 0 chr18 25729904 25730130 -60947418 - LTR18A LTR ERVL -113 244 16 882 194 16 0 chr18 25730674 25730860 -60946688 + MER53 DNA DNA 1 189 0 21 0 0 0 chr18 25730886 25730907 -60946641 + AT_rich Low_complexity Low_complexity 1 21 0 1684 169 0 38 chr18 25731226 25731546 -60946002 - AluJb SINE Alu -2 310 3 329 311 78 0 chr18 25731546 25731649 -60945899 - L2 LINE L2 -41 3231 3121 939 107 67 0 chr18 25731651 25731801 -60945747 + L1MA8 LINE L1 6132 6291 0 2415 117 37 3 chr18 25732330 25732656 -60944892 + MER1B DNA MER1_type 1 337 0 709 169 0 25 chr18 25736838 25736956 -60940592 - AluJ SINE Alu -14 298 184 1774 114 0 0 chr18 25736964 25737201 -60940347 + L1PA8 LINE L1 5933 6169 -3 1047 151 12 12 chr18 25737206 25737378 -60940170 - AluJ SINE Alu -112 200 29 360 298 152 31 chr18 25738522 25738713 -60938835 - MIR SINE MIR -1 261 48 2009 177 6 22 chr18 25738973 25739335 -60938213 - MLT1A1 LTR MaLR 0 365 10 2032 135 0 17 chr18 25739400 25739696 -60937852 - AluSx SINE Alu -21 291 1 31316 25 0 0 chr18 25740165 25744598 -60932950 - L1PA2 LINE L1 0 6155 1725 770 53 0 0 chr18 25744698 25744792 -60932756 - L1PA8A LINE L1 -415 5716 5623 * 803 89 0 6 chr18 25744786 25744904 -60932644 + L1PA8A LINE L1 5497 5599 -532 8454 122 8 35 chr18 25744904 25746341 -60931207 - LTR49-int LTR ERV1 -1222 5109 3712 2092 124 13 3 chr18 25746348 25746655 -60930893 - AluSx SINE Alu -2 310 1 2479 76 31 17 chr18 25746778 25747133 -60930415 - MER11A LTR ERVK 0 1266 907 560 310 37 16 chr18 25748075 25748317 -60929231 + MLT1L LTR MaLR 368 614 -1 3856 63 31 12 chr18 25749990 25750633 -60926915 - MER11A LTR ERVK -513 723 1 1753 150 56 148 chr18 25750638 25751173 -60926375 - LTR49-int LTR ERV1 -2707 3624 3149 852 157 48 100 chr18 25751278 25751410 -60926138 - LTR56 LTR ERV1 0 443 341 1965 120 18 0 chr18 25751410 25751685 -60925863 - AluSx SINE Alu -22 290 11 852 157 48 100 chr18 25751685 25751792 -60925756 - LTR56 LTR ERV1 -102 341 230 551 139 0 0 chr18 25751904 25751976 -60925572 + FRAM SINE Alu 75 146 -30 264 185 169 31 chr18 25752197 25752262 -60925286 - LTR56 LTR ERV1 -224 221 148 1005 168 0 0 chr18 25752663 25752812 -60924736 - FRAM SINE Alu -30 146 1 204 40 0 0 chr18 25752819 25752844 -60924704 + (T)n Simple_repeat Simple_repeat 1 25 0 5714 104 46 0 chr18 25753196 25754027 -60923521 - L1PA13 LINE L1 -2 6161 5290 671 280 95 72 chr18 25754028 25754500 -60923048 - LTR33A LTR ERVL -33 490 8 224 153 0 59 chr18 25755216 25755301 -60922247 + (TTAA)n Simple_repeat Simple_repeat 2 81 0 623 274 46 77 chr18 25755628 25755953 -60921595 - LTR16A LTR ERVL 0 450 136 222 37 0 0 chr18 25755997 25756024 -60921524 + (T)n Simple_repeat Simple_repeat 1 27 0 1237 259 69 75 chr18 25756105 25756541 -60921007 - HERV16 LTR ERVL -2069 2927 2493 1187 184 98 89 chr18 25756541 25756899 -60920649 - MLT1A1 LTR MaLR 0 365 5 1237 259 69 75 chr18 25756899 25756971 -60920577 - HERV16 LTR ERVL -2503 2493 2422 387 273 0 0 chr18 25756976 25757053 -60920495 - MER63 DNA MER1_type -7 1055 979 353 301 29 0 chr18 25757053 25757156 -60920392 - MER63 DNA MER1_type -330 732 1 679 164 52 0 chr18 25757188 25757304 -60920244 + MER68 LTR ERV1 409 530 -32 1123 306 63 18 chr18 25757311 25757755 -60919793 - HERV16 LTR ERVL -2605 2391 1928 737 335 34 7 chr18 25757858 25758193 -60919355 - HERV16 LTR ERVL -3060 1936 1659 1009 301 60 40 chr18 25758229 25758747 -60918801 - HERV16 LTR ERVL -3725 1271 744 598 248 204 50 chr18 25758782 25759445 -60918103 - LTR41 LTR ERVL -1 766 1 755 280 62 73 chr18 25759493 25759957 -60917591 + MLT1H LTR MaLR 72 530 -19 1477 164 34 57 chr18 25759967 25760289 -60917259 + AluJo SINE Alu 1 315 0 3287 173 9 6 chr18 25760309 25760859 -60916689 + MER68 LTR ERV1 3 554 -8 817 272 75 14 chr18 25760919 25761198 -60916350 - HERV16 LTR ERVL -4349 647 352 204 348 98 0 chr18 25761600 25761692 -60915856 - MIR SINE MIR -72 136 36 279 185 0 19 chr18 25761934 25761988 -60915560 - MER5A DNA MER1_type -111 78 26 2102 142 53 102 chr18 25762389 25762693 -60914855 + MER31A LTR ERV1 1 272 -213 1732 122 3 85 chr18 25762693 25763021 -60914527 - AluSx SINE Alu -11 301 1 2102 142 53 102 chr18 25763021 25763225 -60914323 + MER31A LTR ERV1 272 484 -1 328 318 121 35 chr18 25765396 25765569 -60911979 - MER5A DNA MER1_type 0 189 2 23 97 0 0 chr18 25766094 25766166 -60911382 + AT_rich Low_complexity Low_complexity 1 72 0 21 57 0 0 chr18 25768273 25768308 -60909240 + AT_rich Low_complexity Low_complexity 1 35 0 432 240 72 106 chr18 25769001 25769405 -60908143 - L1ME4a LINE L1 -208 5913 5524 247 155 35 17 chr18 25770329 25770387 -60907161 + CT-rich Low_complexity Low_complexity 2 60 0 1568 106 9 0 chr18 25770762 25770980 -60906568 + AluSp SINE Alu 86 305 -8 358 230 96 74 chr18 25771429 25771564 -60905984 - MIR3 SINE MIR -66 142 5 217 257 114 51 chr18 25772852 25773027 -60904521 - MIR3 SINE MIR -21 187 2 1637 109 3 125 chr18 25773067 25773387 -60904161 + AluJo SINE Alu 14 294 -18 227 316 63 0 chr18 25773548 25773643 -60903905 - MER91C DNA MER1_type -34 106 6 824 217 6 0 chr18 25774004 25774165 -60903383 + FRAM SINE Alu 1 159 -17 3332 287 103 60 chr18 25774211 25774910 -60902638 - HAL1 LINE L1 -56 2451 1784 2511 151 54 0 chr18 25774910 25775320 -60902228 - MSTB1 LTR MaLR 0 432 1 3332 287 103 60 chr18 25775320 25776970 -60900578 - HAL1 LINE L1 -723 1784 1 1339 177 4 59 chr18 25777945 25778216 -60899332 + MLT1B LTR MaLR 135 390 0 337 290 0 16 chr18 25779057 25779181 -60898367 + GA-rich Low_complexity Low_complexity 1 122 0 374 314 70 19 chr18 25781538 25781694 -60895854 + MLT1L LTR MaLR 1 164 -451 683 248 224 0 chr18 25781799 25782009 -60895539 + MLT1L LTR MaLR 359 615 0 22 0 0 0 chr18 25782709 25782731 -60894817 + AT_rich Low_complexity Low_complexity 1 22 0 183 266 78 16 chr18 25783446 25783510 -60894038 + MIR SINE MIR 29 96 -166 355 363 62 21 chr18 25785584 25785777 -60891771 - L2 LINE L2 0 3272 3072 427 208 37 82 chr18 25786046 25786230 -60891318 - MIR SINE MIR -29 179 38 383 328 156 28 chr18 25786336 25786873 -60890675 + L2 LINE L2 1977 2582 -732 1354 276 97 21 chr18 25787821 25788335 -60889213 + MLT1H1 LTR MaLR 1 553 -2 439 358 151 15 chr18 25788650 25789055 -60888493 - L2 LINE L2 -6 3266 2807 1239 191 0 12 chr18 25789326 25789582 -60887966 + L1MA4 LINE L1 6045 6297 -3 192 278 233 0 chr18 25790079 25790169 -60887379 - L2 LINE L2 -26 3246 3136 807 113 0 0 chr18 25790240 25790346 -60887202 - AluSg/x SINE Alu -23 289 184 1904 175 82 2 chr18 25790446 25790750 -60886798 - L1MA4 LINE L1 -2 6298 5995 334 213 55 61 chr18 25790750 25790914 -60886634 - L1PA15 LINE L1 -201 5964 5802 1111 242 132 14 chr18 25791385 25791749 -60885799 - MLT1J2 LTR MaLR -43 407 1 226 309 43 12 chr18 25791755 25791917 -60885631 - L1M4 LINE L1 -3767 2379 2213 2014 131 10 0 chr18 25791944 25792235 -60885313 - AluSx SINE Alu -13 299 6 21 36 0 0 chr18 25792270 25792298 -60885250 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 25792421 25792449 -60885099 + AT_rich Low_complexity Low_complexity 1 28 0 347 319 32 25 chr18 25794101 25794274 -60883274 + MIR SINE MIR 19 193 -62 1181 242 65 65 chr18 25794394 25794828 -60882720 - MER57B LTR ERV1 0 434 1 196 26 0 77 chr18 25794962 25795001 -60882547 + (TTTTA)n Simple_repeat Simple_repeat 1 36 0 3916 121 12 69 chr18 25795002 25795670 -60881878 - L1PA13 LINE L1 -25 6138 5509 200 245 137 86 chr18 25796075 25796214 -60881334 + MIR3 SINE MIR 20 165 -43 214 237 66 53 chr18 25796289 25796365 -60881183 - MER5A DNA MER1_type -6 183 107 412 304 76 45 chr18 25796425 25796714 -60880834 - MLT1K LTR MaLR -52 536 239 240 86 0 0 chr18 25796903 25796938 -60880610 + (GA)n Simple_repeat Simple_repeat 2 36 0 6181 231 16 23 chr18 25798013 25799469 -60878079 + MER77-int LTR ERV1 3088 4533 -2225 1494 199 3 48 chr18 25799654 25799991 -60877557 + MER77-int LTR ERV1 3815 4136 -55 1410 220 68 102 chr18 25801468 25801941 -60875607 + MER77 LTR ERV1 145 601 -4 33 73 0 0 chr18 25803264 25803332 -60874216 + AT_rich Low_complexity Low_complexity 1 68 0 2242 103 73 26 chr18 25803681 25804022 -60873526 + THE1B LTR MaLR 1 357 -7 271 313 98 0 chr18 25804934 25805046 -60872502 - MIR SINE MIR -110 152 30 804 268 26 22 chr18 25805432 25805663 -60871885 - MIR SINE MIR -8 254 23 1988 124 108 54 chr18 25805992 25806362 -60871186 + MLT1B LTR MaLR 1 390 0 219 357 0 0 chr18 25806577 25806647 -60870901 - L2 LINE L2 0 3272 3203 390 282 23 8 chr18 25807026 25807157 -60870391 + MIR SINE MIR 79 211 -51 213 121 0 0 chr18 25807338 25807371 -60870177 + (TGGGGG)n Simple_repeat Simple_repeat 3 35 0 571 223 107 107 chr18 25807845 25808333 -60869215 - L1ME4a LINE L1 0 6121 5634 1780 169 10 3 chr18 25808371 25808661 -60868887 - AluJb SINE Alu -20 292 1 2334 232 58 36 chr18 25810451 25811041 -60866507 + LTR26 LTR ERV1 1 603 0 479 308 57 23 chr18 25811067 25811285 -60866263 + MIR SINE MIR 29 253 -9 2103 119 14 0 chr18 25811639 25811934 -60865614 + AluSg SINE Alu 1 299 -11 203 241 66 153 chr18 25812868 25813005 -60864543 - L2 LINE L2 -1 3271 3147 22 0 0 0 chr18 25814080 25814102 -60863446 + AT_rich Low_complexity Low_complexity 1 22 0 420 291 131 25 chr18 25814182 25814426 -60863122 + L1ME LINE L1 5476 5745 -417 1941 121 46 4 chr18 25814931 25815212 -60862336 - AluSg SINE Alu -17 293 1 231 309 16 0 chr18 25815494 25815617 -60861931 + (TA)n Simple_repeat Simple_repeat 1 125 0 2309 69 13 16 chr18 25815726 25816032 -60861516 + AluY SINE Alu 1 305 -6 234 357 116 8 chr18 25816557 25816686 -60860862 - L2 LINE L2 -4 3268 3126 985 228 23 27 chr18 25816747 25816966 -60860582 - MER20 DNA MER1_type 0 219 2 2132 104 4 0 chr18 25817078 25817357 -60860191 - AluSx SINE Alu 0 312 33 2135 242 83 29 chr18 25817584 25818273 -60859275 - L1ME1 LINE L1 -4 6973 6248 43787 32 21 2 chr18 25818278 25824307 -60853241 - L1PA2 LINE L1 0 6155 5 7802 233 80 82 chr18 25824310 25825129 -60852419 - L1ME1 LINE L1 -729 6260 5441 900 204 244 9 chr18 25825129 25825359 -60852189 - AluY SINE Alu -23 288 5 7802 233 80 82 chr18 25825359 25829077 -60848471 - L1ME1 LINE L1 -1548 5441 1554 303 251 114 36 chr18 25829171 25829338 -60848210 - L1ME1 LINE L1 -5644 1211 1032 246 299 63 68 chr18 25829679 25829900 -60847648 - L1ME1 LINE L1 -6612 247 28 1593 187 21 7 chr18 25829902 25830191 -60847357 - AluJo SINE Alu -19 293 1 347 121 0 0 chr18 25830203 25830261 -60847287 - L1MA3 LINE L1 -2 6303 6246 2084 80 55 0 chr18 25830535 25830809 -60846739 - AluY SINE Alu -12 299 11 706 228 176 38 chr18 25831258 25831548 -60846000 + MER102b DNA MER1_type 1 330 -11 1846 78 8 0 chr18 25831839 25832082 -60845466 + L1MA5A LINE L1 6050 6294 -3 22 0 0 0 chr18 25832082 25832104 -60845444 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr18 25832150 25832179 -60845369 + AT_rich Low_complexity Low_complexity 1 29 0 2546 53 0 34 chr18 25832405 25832726 -60844822 + AluY SINE Alu 2 311 0 204 297 108 14 chr18 25833698 25833772 -60843776 + MIR SINE MIR 20 100 -108 201 319 80 35 chr18 25835803 25835916 -60841632 + MIR SINE MIR 17 134 -74 1715 295 128 21 chr18 25836805 25836937 -60840611 + L2 LINE L2 2156 2272 -1041 351 0 0 0 chr18 25836937 25836976 -60840572 + (CA)n Simple_repeat Simple_repeat 1 39 0 234 105 0 0 chr18 25836976 25837014 -60840534 + (TA)n Simple_repeat Simple_repeat 1 38 0 1715 295 128 21 chr18 25837014 25837926 -60839622 + L2 LINE L2 2271 3313 0 291 211 84 14 chr18 25838185 25838256 -60839292 - L2 LINE L2 -1 3271 3196 239 257 21 95 chr18 25839163 25839331 -60838217 - MER21B LTR ERV1 -12 593 492 568 267 104 63 chr18 25839364 25839763 -60837785 - MER21B LTR ERV1 -172 433 24 226 254 153 0 chr18 25839813 25839872 -60837676 + L2 LINE L2 3136 3203 -69 2349 98 0 0 chr18 25840696 25841003 -60836545 + AluY SINE Alu 1 307 -4 405 345 6 11 chr18 25842564 25842738 -60834810 + MIR SINE MIR 8 180 -82 273 112 65 19 chr18 25842975 25843082 -60834466 + (TG)n Simple_repeat Simple_repeat 2 113 0 584 136 50 15 chr18 25843106 25843606 -60833942 + (TG)n Simple_repeat Simple_repeat 1 517 0 2447 93 9 6 chr18 25843738 25844061 -60833487 + L1PA8 LINE L1 5848 6171 -1 4708 157 53 86 chr18 25844073 25845172 -60832376 + MER39B-int LTR ERV1 5121 6183 -148 4359 118 26 14 chr18 25845228 25845873 -60831675 + MER39B LTR ERV1 1 653 0 366 42 0 0 chr18 25845903 25845951 -60831597 + (TG)n Simple_repeat Simple_repeat 2 49 0 310 238 0 0 chr18 25845951 25846014 -60831534 - L1MC4a LINE L1 -1214 6594 6532 419 69 167 0 chr18 25846016 25846088 -60831460 - MER53 DNA DNA -1 188 105 343 154 167 0 chr18 25846018 25846096 -60831452 + MER53 DNA DNA 13 103 -86 * 295 56 0 0 chr18 25846092 25846128 -60831420 - MER53 DNA DNA -153 36 1 * 310 199 202 0 chr18 25846129 25846217 -60831331 - L1MC4 LINE L1 -1447 6557 6439 231 260 24 65 chr18 25846609 25846732 -60830816 - MLT1H LTR MaLR -341 208 91 313 321 56 0 chr18 25846813 25846975 -60830573 + L1M4 LINE L1 2114 2284 -3862 324 169 26 125 chr18 25848020 25848176 -60829372 + L1ME4a LINE L1 1191 6054 -7 2411 143 33 0 chr18 25848647 25849038 -60828510 + L1MA7 LINE L1 5881 6284 -7 23 0 0 0 chr18 25849044 25849067 -60828481 + AT_rich Low_complexity Low_complexity 1 23 0 208 298 170 0 chr18 25849117 25849211 -60828337 - L2 LINE L2 -10 3262 3153 502 191 95 38 chr18 25849284 25849389 -60828159 + MER81 DNA DNA 2 112 -2 2471 77 0 0 chr18 25849667 25849965 -60827583 + AluSc SINE Alu 1 298 -11 391 250 69 32 chr18 25851488 25851676 -60825872 - LTR33 LTR ERVL 0 521 327 467 202 61 0 chr18 25852524 25852623 -60824925 - MER103 DNA DNA -45 121 17 233 302 0 0 chr18 25854194 25854257 -60823291 + L2 LINE L2 2422 2484 -830 286 319 50 0 chr18 25855937 25856056 -60821492 + MER117 DNA MER1_type 21 145 -52 471 323 99 10 chr18 25856773 25856965 -60820583 + MIR SINE MIR 46 254 -8 273 276 95 38 chr18 25857193 25857298 -60820250 + L2 LINE L2 3190 3300 -13 296 320 116 54 chr18 25857759 25858053 -60819495 - L2 LINE L2 -6 3266 2955 12225 48 82 4 chr18 25858621 25860211 -60817337 + L1P LINE L1 2 1715 -4431 918 207 91 125 chr18 25861811 25862371 -60815177 + MER34C LTR ERV1 45 585 0 183 114 0 0 chr18 25863214 25863249 -60814299 + (T)n Simple_repeat Simple_repeat 1 35 0 478 330 85 4 chr18 25864355 25864591 -60812957 + Charlie8 DNA MER1_type 1 255 -2162 362 123 18 0 chr18 25864681 25864762 -60812786 - MLT2B1 LTR ERVL 0 520 394 307 141 31 0 chr18 25864777 25864841 -60812707 + (TA)n Simple_repeat Simple_repeat 1 66 0 1358 240 148 7 chr18 25864851 25865056 -60812492 - MLT2B1 LTR ERVL -50 470 295 2231 107 7 0 chr18 25865056 25865346 -60812202 - AluSc SINE Alu -17 292 1 1358 240 148 7 chr18 25865346 25865552 -60811996 - MLT2B1 LTR ERVL -225 295 1 2332 171 13 10 chr18 25865749 25866140 -60811408 + MSTD LTR MaLR 5 396 0 204 97 0 0 chr18 25867412 25867443 -60810105 + (CA)n Simple_repeat Simple_repeat 1 31 0 516 269 48 0 chr18 25867859 25868004 -60809544 + L2 LINE L2 2561 2712 -602 487 250 0 48 chr18 25868024 25868148 -60809400 - L2 LINE L2 -8 3305 3188 256 317 121 54 chr18 25868112 25868336 -60809212 + L2 LINE L2 2722 2960 -354 * 1901 228 126 21 chr18 25868811 25869281 -60808267 - LTR40a LTR ERVL 0 519 1 1258 223 39 21 chr18 25869281 25869628 -60807920 - HERVL40 LTR ERVL 0 5530 2783 270 361 0 0 chr18 25869603 25869725 -60807823 - MER70-int LTR ERVL -350 4673 4552 * 922 131 11 11 chr18 25869798 25869974 -60807574 + CT-rich Low_complexity Low_complexity 1 176 0 1683 171 50 7 chr18 25870006 25870305 -60807243 - AluJb SINE Alu 0 312 1 3076 284 45 16 chr18 25871223 25872094 -60805454 - MER70-int LTR ERVL -870 4660 3765 4668 237 39 10 chr18 25872139 25873170 -60804378 - MER70-int LTR ERVL -1948 3582 2522 2040 292 49 14 chr18 25873174 25873801 -60803747 - MER70-int LTR ERVL -3924 1606 958 34 24 0 0 chr18 25873851 25873892 -60803656 + AT_rich Low_complexity Low_complexity 1 41 0 1551 164 4 40 chr18 25873892 25874166 -60803382 - L1PB3 LINE L1 -7 6147 5884 319 271 25 78 chr18 25874400 25874552 -60802996 - MIR SINE MIR -19 189 44 1728 227 64 15 chr18 25874552 25874957 -60802591 - LTR40b LTR ERVL -37 425 1 302 276 149 0 chr18 25875015 25875102 -60802446 + MIR SINE MIR 45 144 -64 667 253 54 58 chr18 25875108 25875369 -60802179 - MIR SINE MIR 0 262 3 209 193 18 35 chr18 25875383 25875440 -60802108 + MIR SINE MIR 147 202 -60 211 306 28 37 chr18 25876856 25876964 -60800584 + L2 LINE L2 2918 3024 -248 2129 109 7 0 chr18 25877040 25877361 -60800187 + AluSx SINE Alu 1 323 0 246 313 8 8 chr18 25878669 25878800 -60798748 + (TA)n Simple_repeat Simple_repeat 2 132 0 24 0 0 0 chr18 25878822 25878846 -60798702 + AT_rich Low_complexity Low_complexity 1 24 0 4156 190 61 24 chr18 25879474 25880918 -60796630 - L1ME1 LINE L1 -18 6148 4647 1227 255 74 50 chr18 25880914 25881327 -60796221 - L1ME3A LINE L1 -38 6115 5684 * 5269 99 30 7 chr18 25881327 25882064 -60795484 + L1PA13 LINE L1 5410 6163 0 1227 255 74 50 chr18 25882064 25882206 -60795342 - L1ME3A LINE L1 -469 5684 5547 432 254 65 60 chr18 25882247 25882664 -60794884 - L1ME3A LINE L1 -2790 3339 2921 685 264 121 60 chr18 25882689 25883561 -60793987 - L1MEd LINE L1 -4732 1578 596 437 271 122 63 chr18 25883983 25884286 -60793262 + L2 LINE L2 2988 3308 -5 629 173 220 12 chr18 25884563 25884731 -60792817 + MER3 DNA MER1_type 6 208 -1 268 241 35 0 chr18 25886671 25886729 -60790819 - MER91B DNA MER1_type -129 61 2 277 200 46 0 chr18 25886847 25886912 -60790636 + L1ME4a LINE L1 5984 6051 -70 732 249 14 42 chr18 25887614 25887827 -60789721 - MIR SINE MIR -28 234 28 410 336 8 8 chr18 25887850 25887984 -60789564 + MER5B DNA MER1_type 5 138 -40 777 180 23 35 chr18 25887986 25888158 -60789390 + MLT1C LTR MaLR 3 172 -295 882 194 16 0 chr18 25889018 25889204 -60788344 + MER53 DNA DNA 1 189 0 21 0 0 0 chr18 25889230 25889251 -60788297 + AT_rich Low_complexity Low_complexity 1 21 0 838 220 0 21 chr18 25889570 25889756 -60787792 - AluJb SINE Alu -2 310 129 2016 83 0 4 chr18 25889862 25890115 -60787433 - AluSc SINE Alu -57 252 1 215 329 158 0 chr18 25890920 25890996 -60786552 - L2 LINE L2 -47 3225 3138 275 294 48 41 chr18 25891048 25891194 -60786354 + MER77 LTR ERV1 66 212 -393 252 277 65 69 chr18 25891186 25891417 -60786131 + MER77 LTR ERV1 154 383 -222 * 282 244 49 32 chr18 25895867 25895990 -60781558 - LTR33 LTR ERVL -67 454 330 285 286 90 53 chr18 25898098 25898231 -60779317 + MIR3 SINE MIR 5 142 -66 22 0 0 0 chr18 25898487 25898509 -60779039 + AT_rich Low_complexity Low_complexity 1 22 0 501 281 224 0 chr18 25899210 25899420 -60778128 - MLT1L LTR MaLR 0 615 359 2519 53 0 43 chr18 25900101 25900424 -60777124 + AluY SINE Alu 2 310 -1 225 282 129 0 chr18 25902982 25903067 -60774481 - MLT1L LTR MaLR -161 454 359 290 320 70 19 chr18 25903172 25903328 -60774220 - MLT1L LTR MaLR -451 164 1 1521 208 7 7 chr18 25904499 25904797 -60772751 + MLT1A1 LTR MaLR 68 365 0 254 315 154 39 chr18 25905044 25905246 -60772302 + MIR SINE MIR 36 259 -3 352 340 103 27 chr18 25906387 25906649 -60770899 + L2 LINE L2 2985 3266 -6 1100 282 109 35 chr18 25906967 25907482 -60770066 - MLT1H1 LTR MaLR -2 553 1 474 273 71 15 chr18 25908033 25908231 -60769317 - MLT2B1 LTR ERVL -311 209 1 1852 220 13 10 chr18 25908428 25908819 -60768729 + MSTD LTR MaLR 5 396 0 36921 35 0 0 chr18 25909681 25914834 -60762714 - L1PA2 LINE L1 -30 6125 973 26685 33 0 0 chr18 25914934 25918913 -60758635 + L1PA2 LINE L1 2177 6155 0 2118 244 83 29 chr18 25918918 25919607 -60757941 + L1ME1 LINE L1 5437 6162 -4 2145 100 4 0 chr18 25919834 25920113 -60757435 + AluSx SINE Alu 33 312 0 985 228 23 27 chr18 25920225 25920444 -60757104 + MER20 DNA MER1_type 2 219 0 243 361 113 8 chr18 25920505 25920638 -60756910 + L2 LINE L2 3126 3272 0 325 130 0 0 chr18 25921164 25921218 -60756330 - Alu SINE Alu 0 301 248 * 669 156 109 0 chr18 25921217 25921345 -60756203 - MLT1B LTR MaLR -248 142 1 223 292 0 15 chr18 25921403 25921468 -60756080 + CT-rich Low_complexity Low_complexity 5 68 0 2369 91 3 0 chr18 25921685 25921994 -60755554 + AluSp SINE Alu 1 310 -3 2052 126 0 0 chr18 25922436 25922748 -60754800 + AluSx SINE Alu 1 312 0 299 271 250 0 chr18 25922840 25922984 -60754564 - MER5A DNA MER1_type 0 189 10 228 303 25 43 chr18 25923368 25923530 -60754018 - L1MEd LINE L1 -5011 1108 950 753 241 15 39 chr18 25927265 25927468 -60750080 - MIR SINE MIR -37 225 28 418 326 7 7 chr18 25927490 25927625 -60749923 + MER5B DNA MER1_type 4 138 -40 858 151 23 35 chr18 25927627 25927799 -60749749 + MLT1C LTR MaLR 3 172 -295 1405 190 11 11 chr18 25928042 25928305 -60749243 + MLT1C LTR MaLR 205 467 0 261 200 0 0 chr18 25928305 25928350 -60749198 + MER5B DNA MER1_type 134 178 0 182 337 34 71 chr18 25928878 25929145 -60748403 - L2 LINE L2 -337 2977 2721 594 299 17 6 chr18 25929215 25929389 -60748159 - MIR SINE MIR -70 192 17 461 308 145 18 chr18 25929832 25930053 -60747495 + MIR SINE MIR 1 249 -13 306 0 0 0 chr18 25930240 25930274 -60747274 + (T)n Simple_repeat Simple_repeat 1 34 0 1806 86 13 0 chr18 25930383 25930615 -60746933 - AluY SINE Alu -76 235 1 194 270 54 27 chr18 25931180 25931254 -60746294 + L2 LINE L2 2603 2678 -636 2234 89 26 26 chr18 25931275 25931588 -60745960 + AluSq SINE Alu 1 313 0 693 283 27 27 chr18 25932933 25933147 -60744401 + MLT1I LTR MaLR 1 214 -195 1536 231 92 62 chr18 25933147 25933404 -60744144 - MLT2B1 LTR ERVL 0 464 243 2281 105 0 38 chr18 25933404 25933719 -60743829 + AluSq SINE Alu 1 303 -10 1536 231 92 62 chr18 25933719 25933967 -60743581 - MLT2B1 LTR ERVL -221 243 4 20585 152 28 14 chr18 25933967 25937292 -60740256 - ERVL-B1-B1 LTR ERVL -15 5749 2379 2303 197 5 67 chr18 25937292 25937847 -60739701 - MLT2B1 LTR ERVL -2 513 1 422 111 32 0 chr18 25937848 25937911 -60739637 - ERVL-B1-B1 LTR ERVL -3386 2378 2314 1216 157 60 5 chr18 25937912 25938129 -60739419 + MER46A DNA MER2_type 1 229 -7 5476 176 25 21 chr18 25938137 25939101 -60738447 - ERVL-B1-B1 LTR ERVL -3451 2313 1346 * 5839 205 38 11 chr18 25939094 25940236 -60737312 - ERVL-B1-B1 LTR ERVL -4591 1173 1 250 156 0 22 chr18 25940236 25940271 -60737277 - Ricksha DNA DNA -2343 903 870 2032 189 65 40 chr18 25940320 25940765 -60736783 - MLT2B1 LTR ERVL -41 479 24 579 211 86 40 chr18 25940802 25940954 -60736594 + MLT1I LTR MaLR 239 397 -12 219 36 0 0 chr18 25940981 25941009 -60736539 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1228 312 109 30 chr18 25941058 25941753 -60735795 + L2 LINE L2 2224 2973 -341 905 139 15 0 chr18 25941790 25941927 -60735621 + L1MB1 LINE L1 6030 6168 0 228 304 8 80 chr18 25941966 25942091 -60735457 + L2 LINE L2 3119 3234 -79 348 24 0 0 chr18 25942152 25942193 -60735355 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 324 272 105 18 chr18 25942193 25942307 -60735241 - MIR SINE MIR -62 146 23 228 267 175 33 chr18 25944983 25945103 -60732445 - MIR SINE MIR -57 151 15 2471 143 16 3 chr18 25945842 25946227 -60731321 - MLT1B LTR MaLR 0 390 1 2189 117 0 0 chr18 25946291 25946581 -60730967 + AluSx SINE Alu 5 294 -18 476 285 11 8 chr18 25948226 25948383 -60729165 + MIR SINE MIR 4 158 -50 189 310 56 0 chr18 25948404 25948475 -60729073 + MIR3 SINE MIR 129 203 -5 4017 260 76 42 chr18 25948735 25949497 -60728051 - L1MEc LINE L1 -3519 2696 1962 2101 123 184 11 chr18 25949497 25949862 -60727686 + MSTA LTR MaLR 1 428 0 4017 260 76 42 chr18 25949862 25951411 -60726137 - L1MEc LINE L1 -4253 1962 351 184 313 16 16 chr18 25951935 25951999 -60725549 + MER5A DNA MER1_type 47 110 -79 2702 132 43 14 chr18 25952023 25952441 -60725107 + MSTB1 LTR MaLR 3 432 0 476 254 83 47 chr18 25954192 25954361 -60723187 + MIR SINE MIR 30 204 -58 242 156 0 0 chr18 25954394 25954439 -60723109 - LTR66 LTR ERVL -172 438 394 241 180 0 0 chr18 25954399 25954449 -60723099 + LTR66 LTR ERVL 394 443 -167 * 21 0 0 0 chr18 25954513 25954534 -60723014 + AT_rich Low_complexity Low_complexity 1 21 0 1719 170 0 17 chr18 25955015 25955303 -60722245 + AluJo SINE Alu 7 289 -23 22 35 0 0 chr18 25955308 25955337 -60722211 + AT_rich Low_complexity Low_complexity 1 29 0 223 279 0 89 chr18 25957481 25957560 -60719988 + L2 LINE L2 3242 3313 0 216 0 0 0 chr18 25957770 25957794 -60719754 + (T)n Simple_repeat Simple_repeat 1 24 0 265 249 40 51 chr18 25957989 25958170 -60719378 + L3 LINE CR1 1180 1453 -124 475 276 89 37 chr18 25958440 25958654 -60718894 + MLT1L LTR MaLR 155 379 -236 228 306 153 0 chr18 25960118 25960229 -60717319 + MARNA DNA Mariner 436 563 -23 207 0 0 0 chr18 25960368 25960391 -60717157 + (TC)n Simple_repeat Simple_repeat 1 23 0 223 232 167 54 chr18 25960621 25960789 -60716759 - MIR3 SINE MIR -4 204 18 532 208 143 19 chr18 25961907 25962061 -60715487 + MER3 DNA MER1_type 3 128 -81 30 27 0 0 chr18 25962164 25962201 -60715347 + AT_rich Low_complexity Low_complexity 1 37 0 227 271 313 0 chr18 25962221 25962317 -60715231 + MER5A DNA MER1_type 57 182 -7 298 284 2 15 chr18 25962358 25962439 -60715109 + MER5B DNA MER1_type 26 107 -82 376 276 32 39 chr18 25963539 25963695 -60713853 - L2 LINE L2 -11 3302 3148 661 306 73 45 chr18 25964938 25965099 -60712449 - L2 LINE L2 0 3313 3158 2181 115 7 0 chr18 25965099 25965394 -60712154 + AluSx SINE Alu 1 297 -15 661 306 73 45 chr18 25965394 25965614 -60711934 - L2 LINE L2 -155 3158 2921 4572 123 30 0 chr18 25966613 25967245 -60710303 + MER39B LTR ERV1 3 653 0 1048 127 85 32 chr18 25967769 25967958 -60709590 - MER39B LTR ERV1 -89 564 366 1513 284 9 9 chr18 25967958 25968384 -60709164 + L1MCb LINE L1 2 427 -5618 1163 194 0 15 chr18 25968389 25968585 -60708963 + AluJb SINE Alu 93 285 -27 191 88 29 0 chr18 25968588 25968622 -60708926 + (GA)n Simple_repeat Simple_repeat 2 36 0 555 231 30 34 chr18 25968651 25968796 -60708752 + L1MCb LINE L1 430 780 -5488 3418 214 75 13 chr18 25968895 25970193 -60707355 + L1MCb LINE L1 570 2091 -4473 317 250 16 0 chr18 25970918 25970982 -60706566 + L2 LINE L2 3203 3267 -5 522 249 50 91 chr18 25970990 25971211 -60706337 + MER58C DNA MER1_type 4 215 0 2136 191 21 80 chr18 25975597 25976132 -60701416 - MLT1D LTR MaLR 0 505 3 442 311 155 24 chr18 25976345 25976551 -60700997 - MIR SINE MIR -17 245 13 195 42 0 0 chr18 25977481 25977505 -60700043 + (A)n Simple_repeat Simple_repeat 1 24 0 259 178 20 0 chr18 25978182 25978283 -60699265 + (TA)n Simple_repeat Simple_repeat 2 104 0 677 226 52 26 chr18 25978295 25978450 -60699098 - AluJb SINE Alu -17 295 137 789 197 67 17 chr18 25978527 25978705 -60698843 - MER5A DNA MER1_type 0 189 3 597 299 46 5 chr18 25978805 25979022 -60698526 - MIR SINE MIR -21 241 16 284 229 35 141 chr18 25980419 25980589 -60696959 + LTR67 LTR ERVL 4 155 -402 445 246 137 23 chr18 25980680 25980855 -60696693 + LTR67 LTR ERVL 356 550 -7 369 162 0 0 chr18 25981468 25981536 -60696012 + CT-rich Low_complexity Low_complexity 1 68 0 338 236 18 64 chr18 25982850 25982960 -60694588 + L2 LINE L2 3209 3313 0 440 281 133 48 chr18 25983606 25983855 -60693693 + MLT1I LTR MaLR 71 340 -69 331 320 154 23 chr18 25983879 25984307 -60693241 - LTR33 LTR ERVL -37 484 1 1906 161 7 0 chr18 25984593 25984884 -60692664 - AluJb SINE Alu -19 293 1 380 269 50 28 chr18 25985862 25986044 -60691504 - L1M1 LINE L1 -793 5510 5325 4736 127 52 11 chr18 25987285 25987693 -60689855 + LTR39 LTR ERV1 1 391 -392 2319 114 0 0 chr18 25987693 25988000 -60689548 - AluSx SINE Alu -5 307 1 4736 127 52 11 chr18 25988000 25988341 -60689207 + LTR39 LTR ERV1 391 781 -2 203 292 31 15 chr18 25988539 25988604 -60688944 + L2 LINE L2 3248 3313 0 225 246 325 0 chr18 25989735 25989849 -60687699 + MIR SINE MIR 2 152 -110 215 213 0 43 chr18 25989995 25990042 -60687506 - L2 LINE L2 -201 3071 3027 444 306 59 16 chr18 25990451 25990637 -60686911 + MIR3 SINE MIR 11 204 -4 262 264 66 57 chr18 25991006 25991112 -60686436 + L2 LINE L2 3199 3305 -8 180 323 62 15 chr18 25991738 25991868 -60685680 + L2 LINE L2 2365 2500 -814 190 344 58 58 chr18 25992229 25992383 -60685165 + L2 LINE L2 3117 3270 -2 239 280 140 9 chr18 25993871 25993978 -60683570 - L2 LINE L2 0 3313 3193 1878 103 0 4 chr18 25994617 25994870 -60682678 - AluSq SINE Alu -8 305 54 415 341 50 5 chr18 25997062 25997282 -60680266 + MIR SINE MIR 10 239 -23 286 278 117 40 chr18 25997282 25997600 -60679948 - LTR16A LTR ERVL 0 450 99 1942 14 0 0 chr18 25997897 25998114 -60679434 - L1PA3 LINE L1 -255 5900 5684 2547 24 0 3 chr18 25998114 25998404 -60679144 + L1PA3 LINE L1 5858 6148 -7 202 190 35 35 chr18 25998609 25998667 -60678881 + MER5A DNA MER1_type 128 185 -4 2178 95 0 7 chr18 25999091 25999406 -60678142 - AluSg SINE Alu 0 313 1 208 272 12 37 chr18 26000249 26000330 -60677218 + MIR SINE MIR 23 101 -161 2438 75 0 0 chr18 26000811 26001105 -60676443 + AluY SINE Alu 1 294 -17 369 314 0 10 chr18 26001119 26001221 -60676327 + L2 LINE L2 3177 3277 -36 2008 181 5 62 chr18 26001227 26001277 -60676271 + MLT1A1 LTR MaLR 1 52 -313 1496 91 119 0 chr18 26001277 26001520 -60676028 + L1MA3 LINE L1 6034 6305 0 2008 181 5 62 chr18 26001520 26001856 -60675692 + MLT1A1 LTR MaLR 52 365 0 734 187 0 7 chr18 26002220 26002519 -60675029 + (TG)n Simple_repeat Simple_repeat 1 296 0 217 200 0 0 chr18 26002657 26002697 -60674851 - MIR SINE MIR -166 96 57 224 279 22 29 chr18 26004039 26004175 -60673373 + GA-rich Low_complexity Low_complexity 1 135 0 2484 114 67 10 chr18 26004461 26004863 -60672685 - MSTA LTR MaLR -3 425 1 364 286 21 21 chr18 26004917 26005057 -60672491 + MIR SINE MIR 2 141 -121 2337 90 13 10 chr18 26005084 26005384 -60672164 - AluSg SINE Alu -9 301 1 2210 124 0 0 chr18 26005387 26005686 -60671862 - AluSx SINE Alu -13 299 1 276 30 0 0 chr18 26006006 26006039 -60671509 + (TA)n Simple_repeat Simple_repeat 2 34 0 243 321 25 44 chr18 26006101 26006260 -60671288 + L2 LINE L2 3158 3313 0 3103 159 21 0 chr18 26006362 26006922 -60670626 - L1MB7 LINE L1 -19 6165 5594 953 181 11 37 chr18 26008800 26008988 -60668560 + MLT1D LTR MaLR 1 183 -322 557 152 0 0 chr18 26009029 26009121 -60668427 + FLAM_A SINE Alu 41 132 -10 1367 174 83 11 chr18 26009160 26009436 -60668112 + MLT1D LTR MaLR 206 501 -4 318 252 103 0 chr18 26009714 26009821 -60667727 - MIR SINE MIR -134 128 11 291 279 48 0 chr18 26010523 26010627 -60666921 + MER5B DNA MER1_type 70 178 0 805 260 20 24 chr18 26013241 26013495 -60664053 + MIR SINE MIR 7 259 -3 561 306 23 27 chr18 26013707 26013968 -60663580 - MIR SINE MIR 0 262 3 2396 80 3 7 chr18 26014039 26014364 -60663184 + AluY SINE Alu 1 311 0 841 270 60 45 chr18 26015192 26015573 -60661975 + L2 LINE L2 2926 3312 -1 2328 96 0 0 chr18 26016921 26017214 -60660334 + AluSg SINE Alu 1 293 -17 241 274 16 0 chr18 26017260 26017322 -60660226 - L2 LINE L2 -5 3308 3246 311 321 123 44 chr18 26017409 26017458 -60660090 - L2 LINE L2 -339 2975 2931 2215 110 0 7 chr18 26017458 26017757 -60659791 + AluSq SINE Alu 1 297 -16 311 321 123 44 chr18 26017757 26018440 -60659108 - L2 LINE L2 -383 2931 2185 444 338 50 28 chr18 26019726 26020125 -60657423 + L1M4 LINE L1 2142 2549 -3597 245 312 113 0 chr18 26020190 26020331 -60657217 + L1M4 LINE L1 2841 2997 -3149 313 159 14 43 chr18 26020746 26020815 -60656733 + MER5B DNA MER1_type 1 67 -111 247 272 43 11 chr18 26020977 26021069 -60656479 - MER5B DNA MER1_type -83 95 1 503 242 136 0 chr18 26021413 26021545 -60656003 + MIR SINE MIR 55 204 -58 766 269 86 0 chr18 26021722 26021956 -60655592 + MIR SINE MIR 9 262 0 21 71 0 0 chr18 26022337 26022379 -60655169 + AT_rich Low_complexity Low_complexity 1 42 0 210 143 0 0 chr18 26022561 26022596 -60654952 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 0 0 0 chr18 26024529 26024552 -60652996 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 1580 148 0 81 chr18 26024780 26025077 -60652471 - AluJo SINE Alu -25 287 15 489 34 0 0 chr18 26025193 26025252 -60652296 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 776 274 50 9 chr18 26025264 26025483 -60652065 - MIR SINE MIR -27 235 8 447 264 76 49 chr18 26025480 26025624 -60651924 - MIR SINE MIR -69 193 46 * 562 234 158 13 chr18 26025676 26025834 -60651714 - MER5A DNA MER1_type -2 187 7 2507 64 0 0 chr18 26027452 26027750 -60649798 + AluY SINE Alu 1 298 -13 2443 94 0 0 chr18 26027877 26028186 -60649362 - AluSc SINE Alu 0 309 1 1769 151 7 10 chr18 26028494 26028786 -60648762 + AluSx SINE Alu 3 293 -19 224 310 23 23 chr18 26030001 26030104 -60647444 + MIR SINE MIR 52 136 -72 23 0 0 0 chr18 26030540 26030563 -60646985 + AT_rich Low_complexity Low_complexity 1 23 0 373 350 91 12 chr18 26031544 26031787 -60645761 + MIR SINE MIR 1 262 0 234 156 0 0 chr18 26032552 26032597 -60644951 + (CA)n Simple_repeat Simple_repeat 2 46 0 258 169 15 62 chr18 26032641 26032706 -60644842 - L2 LINE L2 -25 3247 3186 290 384 47 25 chr18 26033368 26033686 -60643862 + L2 LINE L2 2606 2930 -384 256 283 13 14 chr18 26034049 26034140 -60643408 - MIR SINE MIR -40 168 82 2634 142 0 20 chr18 26034274 26034668 -60642880 - MLT1B LTR MaLR -4 386 1 1652 182 170 9 chr18 26035795 26036136 -60641412 - MSTD LTR MaLR 0 396 1 562 113 12 12 chr18 26036558 26036638 -60640910 - MADE1 DNA Mariner 0 80 1 568 249 58 42 chr18 26037156 26037345 -60640203 + MIR SINE MIR 52 243 -19 188 368 23 0 chr18 26037361 26037448 -60640100 + L2 LINE L2 3168 3256 -16 282 306 60 30 chr18 26037630 26037764 -60639784 + L2 LINE L2 2958 3095 -177 369 0 0 0 chr18 26038512 26038553 -60638995 + (CA)n Simple_repeat Simple_repeat 2 42 0 234 91 0 0 chr18 26038553 26038586 -60638962 + (GAAA)n Simple_repeat Simple_repeat 3 35 0 2443 206 29 16 chr18 26041348 26041833 -60635715 + MLT1F LTR MaLR 1 491 -51 426 226 12 0 chr18 26041838 26041922 -60635626 + MER96 DNA MER1_type? 6 90 -85 192 152 0 0 chr18 26041990 26042023 -60635525 + CT-rich Low_complexity Low_complexity 3 35 0 386 291 60 35 chr18 26043136 26043335 -60634213 - MIR SINE MIR 0 262 59 206 311 184 10 chr18 26043812 26043915 -60633633 + L2 LINE L2 3183 3303 -10 473 319 13 19 chr18 26043990 26044147 -60633401 + MIR SINE MIR 29 184 -78 718 235 11 125 chr18 26044160 26044441 -60633107 + MIR SINE MIR 13 261 -1 230 211 0 19 chr18 26044462 26044514 -60633034 + MIR SINE MIR 203 253 -9 195 42 0 0 chr18 26045543 26045567 -60631981 + (A)n Simple_repeat Simple_repeat 1 24 0 188 138 0 0 chr18 26045657 26045686 -60631862 + MIR SINE MIR 16 44 -218 233 246 127 42 chr18 26046440 26046582 -60630966 - L1MC4 LINE L1 -1300 6742 6589 263 356 42 8 chr18 26046949 26047067 -60630481 + L2 LINE L2 3184 3305 -8 214 190 69 52 chr18 26047125 26047183 -60630365 + MIR SINE MIR 82 140 -68 584 270 119 9 chr18 26047196 26047422 -60630126 - MIR SINE MIR -10 252 2 265 139 0 23 chr18 26047562 26047605 -60629943 - MLT1L LTR MaLR -7 608 567 22 0 0 0 chr18 26048053 26048075 -60629473 + AT_rich Low_complexity Low_complexity 1 22 0 241 236 167 14 chr18 26048904 26048976 -60628572 + MLT1L LTR MaLR 3 85 -530 812 261 89 125 chr18 26049033 26049450 -60628098 + MLT1L LTR MaLR 109 609 -1 210 281 134 12 chr18 26050429 26050511 -60627037 - L2 LINE L2 0 3313 3222 228 206 0 44 chr18 26050552 26050620 -60626928 - L1MCa LINE L1 -4362 2064 2000 353 316 72 40 chr18 26050698 26050999 -60626549 - L2 LINE L2 -213 3059 2750 1588 324 114 40 chr18 26051009 26052321 -60625227 - L2 LINE L2 -696 2618 1209 2091 123 3 19 chr18 26052353 26052663 -60624885 - AluSx SINE Alu -5 307 3 848 212 146 31 chr18 26052817 26053105 -60624443 - MLT1F LTR MaLR -54 488 168 866 185 52 0 chr18 26053428 26053601 -60623947 - MER5A DNA MER1_type -7 182 1 1524 159 96 4 chr18 26053903 26054064 -60623484 - AluJb SINE Alu -17 295 150 186 71 0 0 chr18 26054064 26054092 -60623456 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1524 159 96 4 chr18 26054092 26054200 -60623348 - AluJb SINE Alu -162 150 1 350 294 141 12 chr18 26054262 26054432 -60623116 - MIR SINE MIR -35 227 36 203 164 0 73 chr18 26054488 26054543 -60623005 + MIR SINE MIR 119 169 -93 1051 131 12 0 chr18 26057598 26057766 -60619782 + AluSg/x SINE Alu 142 311 -1 464 285 54 21 chr18 26058073 26058259 -60619289 - MIR SINE MIR -69 193 2 180 0 0 0 chr18 26058780 26058800 -60618748 + (AAATG)n Simple_repeat Simple_repeat 1 20 0 255 292 34 11 chr18 26058839 26058928 -60618620 + CT-rich Low_complexity Low_complexity 3 93 0 453 244 92 0 chr18 26059558 26059689 -60617859 - MIR SINE MIR -69 193 51 3026 191 9 32 chr18 26059977 26060543 -60617005 + MER41C LTR ERV1 2 554 0 395 316 23 8 chr18 26060636 26060769 -60616779 + L2 LINE L2 3179 3313 0 231 297 198 75 chr18 26060899 26061161 -60616387 + L2 LINE L2 1277 1505 -1809 2819 42 6 9 chr18 26061161 26061492 -60616056 + L1PA7 LINE L1 5823 6152 -2 231 297 198 75 chr18 26061492 26061547 -60616001 + L2 LINE L2 1505 1552 -1762 2619 138 46 14 chr18 26061547 26061766 -60615782 - MSTB LTR MaLR 0 426 215 2390 99 0 0 chr18 26061766 26062069 -60615479 - AluY SINE Alu -8 303 1 2619 138 46 14 chr18 26062069 26062262 -60615286 - MSTB LTR MaLR -211 215 1 231 297 198 75 chr18 26062262 26062674 -60614874 + L2 LINE L2 1552 2097 -1217 41217 68 13 2 chr18 26062719 26068785 -60608763 + L1PA5 LINE L1 11 6147 -7 477 347 130 53 chr18 26068793 26069456 -60608092 + L2 LINE L2 2543 3254 -18 285 301 86 6 chr18 26069788 26069951 -60607597 - L1ME4a LINE L1 -1 6120 5945 422 273 60 35 chr18 26070038 26070320 -60607228 - L1MC5 LINE L1 -118 7843 7555 381 267 151 23 chr18 26070579 26070934 -60606614 - L1ME4a LINE L1 -495 5626 5223 308 208 26 26 chr18 26072519 26072596 -60604952 + L2 LINE L2 3222 3298 -15 329 235 118 29 chr18 26072779 26072915 -60604633 - L2 LINE L2 0 3313 3166 202 244 0 0 chr18 26073661 26073706 -60603842 - MIR SINE MIR 0 262 218 * 210 194 0 0 chr18 26073674 26073710 -60603838 - L2 LINE L2 -19 3253 3218 213 361 34 25 chr18 26073970 26074089 -60603459 - L2 LINE L2 -201 3071 2952 * 224 292 47 99 chr18 26074064 26074256 -60603292 + MIR3 SINE MIR 15 196 -12 566 245 34 52 chr18 26074732 26075001 -60602547 - L1ME4a LINE L1 -182 5939 5676 291 245 223 0 chr18 26076163 26076257 -60601291 + L2 LINE L2 3199 3313 0 260 268 14 0 chr18 26076312 26076383 -60601165 + MIR SINE MIR 112 183 -79 189 0 0 0 chr18 26076711 26076732 -60600816 + (GGA)n Simple_repeat Simple_repeat 3 23 0 215 298 0 0 chr18 26077673 26077730 -60599818 + CT-rich Low_complexity Low_complexity 2 58 0 2138 133 0 0 chr18 26078204 26078513 -60599035 - AluSx SINE Alu -3 309 1 777 258 14 14 chr18 26079588 26079801 -60597747 + MIR SINE MIR 45 257 -5 201 133 0 0 chr18 26080314 26080344 -60597204 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1784 142 0 106 chr18 26081471 26081802 -60595746 + AluJb SINE Alu 2 297 -5 2474 87 0 0 chr18 26082546 26082858 -60594690 - AluSx SINE Alu 0 312 1 241 299 37 37 chr18 26083233 26083340 -60594208 + L2 LINE L2 3162 3268 -4 596 290 142 45 chr18 26084029 26084381 -60593167 - LTR33A LTR ERVL -3 520 135 216 319 0 0 chr18 26086015 26086084 -60591464 - L3 LINE CR1 -5 1572 1504 1006 198 109 0 chr18 26086971 26087163 -60590385 + MER58C DNA MER1_type 1 213 -2 350 319 60 18 chr18 26087172 26087338 -60590210 - MER5A DNA MER1_type 0 189 17 225 357 31 8 chr18 26087774 26087903 -60589645 + L2 LINE L2 1759 1890 -1424 253 321 95 22 chr18 26088229 26088366 -60589182 + L2 LINE L2 3165 3311 -2 25 31 0 0 chr18 26088785 26088817 -60588731 + AT_rich Low_complexity Low_complexity 1 32 0 610 269 114 51 chr18 26089253 26089587 -60587961 + MLT1J2 LTR MaLR 71 425 -25 225 65 0 0 chr18 26090387 26090418 -60587130 + (TC)n Simple_repeat Simple_repeat 1 31 0 243 0 0 0 chr18 26090940 26090967 -60586581 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2187 100 7 0 chr18 26090974 26091263 -60586285 - AluSq SINE Alu -22 291 1 242 29 29 0 chr18 26091462 26091497 -60586051 + (TG)n Simple_repeat Simple_repeat 2 37 0 300 53 0 0 chr18 26094247 26094285 -60583263 + (CA)n Simple_repeat Simple_repeat 2 39 0 489 277 49 33 chr18 26094555 26094739 -60582809 - MLT1J2 LTR MaLR 0 450 264 21 57 0 0 chr18 26095237 26095272 -60582276 + AT_rich Low_complexity Low_complexity 1 35 0 70 97 0 0 chr18 26095288 26095505 -60582043 + AT_rich Low_complexity Low_complexity 1 217 0 239 127 0 18 chr18 26097998 26098053 -60579495 + (GGAA)n Simple_repeat Simple_repeat 2 55 0 316 195 32 0 chr18 26100290 26100444 -60577104 + (TA)n Simple_repeat Simple_repeat 2 160 0 298 113 47 47 chr18 26100522 26100672 -60576876 + (TA)n Simple_repeat Simple_repeat 1 150 0 438 222 5 2 chr18 26100780 26101214 -60576334 + (TA)n Simple_repeat Simple_repeat 1 435 0 218 178 75 9 chr18 26101226 26101333 -60576215 + (TA)n Simple_repeat Simple_repeat 2 115 0 234 176 20 0 chr18 26101334 26101385 -60576163 + LTR66 LTR ERVL 387 438 -172 200 331 51 51 chr18 26101953 26102110 -60575438 - MIR3 SINE MIR -14 194 38 408 339 8 8 chr18 26102194 26102318 -60575230 + MIR SINE MIR 23 146 -62 189 314 0 0 chr18 26103445 26103496 -60574052 + L2 LINE L2 3263 3313 0 649 260 53 12 chr18 26103651 26103820 -60573728 + MER5B DNA MER1_type 2 177 -1 264 284 42 11 chr18 26103827 26103922 -60573626 - MIR SINE MIR -91 117 20 184 319 77 0 chr18 26104418 26104509 -60573039 - MIR SINE MIR -51 211 114 265 246 0 16 chr18 26104566 26104627 -60572921 - MIR SINE MIR -55 153 94 208 294 94 24 chr18 26104703 26104788 -60572760 + MIR SINE MIR 20 110 -152 191 242 0 42 chr18 26104807 26104927 -60572621 + GA-rich Low_complexity Low_complexity 4 118 0 1345 134 22 43 chr18 26106463 26106694 -60570854 - AluJb SINE Alu 0 312 87 527 302 104 18 chr18 26107334 26107556 -60569992 + MIR SINE MIR 21 261 -1 23 0 0 0 chr18 26107696 26107719 -60569829 + AT_rich Low_complexity Low_complexity 1 23 0 200 265 0 29 chr18 26108949 26109017 -60568531 + (CA)n Simple_repeat Simple_repeat 1 66 0 278 98 20 0 chr18 26110193 26110244 -60567304 + (TC)n Simple_repeat Simple_repeat 1 52 0 202 321 12 25 chr18 26112015 26112096 -60565452 - L2 LINE L2 -5 3308 3229 698 272 53 8 chr18 26112975 26113218 -60564330 + MIR SINE MIR 4 257 -5 22 0 0 0 chr18 26113711 26113733 -60563815 + AT_rich Low_complexity Low_complexity 1 22 0 479 207 0 0 chr18 26113778 26113860 -60563688 - L1M4 LINE L1 -1156 4990 4909 1140 137 16 0 chr18 26113862 26114044 -60563504 - L1MA8 LINE L1 -71 6220 6036 269 217 83 0 chr18 26114036 26114096 -60563452 - L1M4 LINE L1 -1187 4959 4895 * 4449 147 31 29 chr18 26114147 26114727 -60562821 - L1 LINE L1 -880 5266 4683 225 0 0 0 chr18 26114727 26114752 -60562796 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 4449 147 31 29 chr18 26114752 26115020 -60562528 - L1 LINE L1 -1463 4683 4417 2109 113 13 7 chr18 26115020 26115321 -60562227 - AluSc SINE Alu -6 303 1 378 338 92 19 chr18 26116834 26117041 -60560507 + MIR SINE MIR 35 256 -6 1581 153 10 68 chr18 26117225 26117532 -60560016 + AluJo SINE Alu 1 289 -23 1106 75 0 0 chr18 26117542 26117675 -60559873 + AluSg/x SINE Alu 163 295 -15 950 106 0 0 chr18 26117680 26117803 -60559745 + AluSp/q SINE Alu 173 295 -18 397 319 43 0 chr18 26118133 26118249 -60559299 - MIR SINE MIR -133 129 9 2361 100 0 0 chr18 26118610 26118951 -60558597 + AluY SINE Alu 1 341 0 1904 121 67 42 chr18 26119059 26119415 -60558133 - THE1C LTR MaLR -10 365 1 578 306 47 30 chr18 26119798 26120030 -60557518 + MIR SINE MIR 17 252 -10 385 282 0 0 chr18 26121255 26121340 -60556208 + L2 LINE L2 3161 3245 -27 554 279 32 45 chr18 26121835 26122172 -60555376 - LTR16A1 LTR ERVL -1 456 119 648 270 58 86 chr18 26123049 26123516 -60554032 + MLT1J LTR MaLR 28 481 -30 1783 168 31 0 chr18 26123851 26124142 -60553406 - AluJb SINE Alu -12 300 1 300 56 463 0 chr18 26124280 26124334 -60553214 - MADE1 DNA Mariner -1 79 1 398 257 67 0 chr18 26124583 26124688 -60552860 + L2 LINE L2 3184 3295 -18 219 163 38 0 chr18 26124688 26124768 -60552780 + (TA)n Simple_repeat Simple_repeat 2 84 0 227 97 0 0 chr18 26124768 26124799 -60552749 - LTR8A LTR ERV1 -520 207 177 331 134 78 0 chr18 26124801 26124943 -60552605 + (TA)n Simple_repeat Simple_repeat 2 154 0 182 338 127 49 chr18 26125513 26125655 -60551893 + L2 LINE L2 2937 3089 -183 2925 176 66 66 chr18 26125684 26126366 -60551182 - LTR8A LTR ERV1 -12 715 34 625 240 13 27 chr18 26126413 26126563 -60550985 + MIR SINE MIR 10 157 -105 1842 182 10 0 chr18 26126566 26126874 -60550674 + AluJo SINE Alu 1 311 -1 198 0 0 0 chr18 26127055 26127077 -60550471 + (T)n Simple_repeat Simple_repeat 1 22 0 335 262 19 0 chr18 26127832 26127935 -60549613 + (TA)n Simple_repeat Simple_repeat 2 106 0 23 0 0 0 chr18 26129353 26129376 -60548172 + AT_rich Low_complexity Low_complexity 1 23 0 236 284 0 0 chr18 26130263 26130330 -60547218 + A-rich Low_complexity Low_complexity 1 67 0 216 111 0 0 chr18 26130846 26130882 -60546666 + (TG)n Simple_repeat Simple_repeat 1 36 0 333 286 165 33 chr18 26131749 26131931 -60545617 + MIR SINE MIR 2 207 -55 1923 142 0 34 chr18 26132550 26132845 -60544703 + AluSx SINE Alu 1 285 -27 240 200 0 0 chr18 26132845 26132910 -60544638 + (TA)n Simple_repeat Simple_repeat 2 66 0 1752 189 20 0 chr18 26132927 26133403 -60544145 + AluJo SINE Alu 2 483 0 1802 209 119 28 chr18 26133456 26133919 -60543629 - MLT1D LTR MaLR 0 505 1 281 273 0 15 chr18 26135514 26135580 -60541968 + L2 LINE L2 3018 3082 -190 497 254 178 35 chr18 26136140 26136455 -60541093 + MLT1J2 LTR MaLR 51 410 -40 221 146 21 0 chr18 26137851 26137899 -60539649 + CT-rich Low_complexity Low_complexity 2 50 0 342 214 120 38 chr18 26138838 26139007 -60538541 + MLT1I LTR MaLR 266 409 0 * 391 236 79 57 chr18 26139007 26139190 -60538358 + MLT1J1 LTR MaLR 24 208 -201 354 272 59 47 chr18 26139210 26139379 -60538169 + MLT1J2 LTR MaLR 258 428 -22 768 284 108 28 chr18 26139840 26140276 -60537272 - L1ME LINE L1 -305 5816 5346 514 266 0 0 chr18 26140332 26140445 -60537103 - MER94 DNA DNA -20 114 2 706 264 93 68 chr18 26140675 26140986 -60536562 + L2 LINE L2 2994 3312 -1 21 57 0 0 chr18 26141306 26141341 -60536207 + AT_rich Low_complexity Low_complexity 1 35 0 369 43 0 0 chr18 26141399 26141446 -60536102 + (TG)n Simple_repeat Simple_repeat 2 48 0 266 222 32 16 chr18 26141447 26141510 -60536038 - MLT1J1 LTR MaLR -4 442 379 452 290 63 114 chr18 26141700 26142262 -60535286 + L1M4 LINE L1 4121 4650 -1496 2059 107 29 0 chr18 26142262 26142543 -60535005 + AluSx SINE Alu 24 312 0 452 290 63 114 chr18 26142543 26142600 -60534948 + L1M4 LINE L1 4650 4708 -1438 325 304 80 37 chr18 26142630 26143449 -60534099 + L1M4 LINE L1 4795 5658 -520 485 261 50 6 chr18 26143466 26143627 -60533921 - L1M4 LINE L1 -1984 4162 3995 * 1355 263 62 35 chr18 26143624 26144258 -60533290 - L1MEc LINE L1 -5085 1311 661 284 276 43 25 chr18 26144338 26144501 -60533047 - L1MC4 LINE L1 -1 8041 7876 28 0 0 0 chr18 26144716 26144744 -60532804 + AT_rich Low_complexity Low_complexity 1 28 0 264 270 95 40 chr18 26145009 26145209 -60532339 - HAL1b LINE L1 -656 692 482 233 391 0 9 chr18 26145300 26145410 -60532138 - MIR SINE MIR -1 261 153 3877 163 15 31 chr18 26146413 26147126 -60530422 - L1MA10 LINE L1 -10 6324 5623 295 365 39 14 chr18 26147656 26147864 -60529684 - L2 LINE L2 -1236 2078 1866 304 246 14 0 chr18 26147960 26148029 -60529519 + MIR3 SINE MIR 108 177 -31 348 255 66 0 chr18 26148115 26148221 -60529327 + L1MC5 LINE L1 7270 7382 -579 780 266 17 21 chr18 26148384 26148625 -60528923 + LTR16C LTR ERVL 252 491 0 571 258 77 55 chr18 26148639 26149054 -60528494 + L1MC5 LINE L1 7502 7925 -36 199 304 52 17 chr18 26150359 26150474 -60527074 - L2 LINE L2 -94 3219 3101 2388 128 17 3 chr18 26150476 26150836 -60526712 + MLT1B LTR MaLR 11 375 -15 1331 163 9 13 chr18 26151004 26151231 -60526317 - AluJo SINE Alu -86 226 1 636 212 17 63 chr18 26152170 26152352 -60525196 - MLT1D LTR MaLR -346 159 14 345 140 0 0 chr18 26152540 26152597 -60524951 + (TG)n Simple_repeat Simple_repeat 2 58 0 470 221 0 0 chr18 26152748 26152834 -60524714 + MLT1D LTR MaLR 36 121 -384 5960 88 9 1 chr18 26152835 26153285 -60524263 + L1PB1 LINE L1 5329 5774 -377 2136 122 0 10 chr18 26153285 26153579 -60523969 + AluSq SINE Alu 3 293 -20 303 28 0 0 chr18 26153583 26153619 -60523929 + (TAGA)n Simple_repeat Simple_repeat 3 38 0 5960 88 9 1 chr18 26153619 26153980 -60523568 + L1PB1 LINE L1 5776 6151 0 1633 168 70 75 chr18 26154006 26154404 -60523144 + MLT1D LTR MaLR 110 505 0 349 289 34 67 chr18 26154404 26154553 -60522995 + MIR SINE MIR 60 203 -59 * 359 273 85 28 chr18 26154526 26154702 -60522846 + MIR SINE MIR 24 209 -53 1003 169 11 28 chr18 26155060 26155238 -60522310 + MER5B DNA MER1_type 1 175 -3 22 56 0 0 chr18 26156506 26156542 -60521006 + AT_rich Low_complexity Low_complexity 1 36 0 1399 198 107 83 chr18 26157032 26157511 -60520037 - L1ME2 LINE L1 -10 6154 5665 1374 235 14 7 chr18 26161605 26161890 -60515658 + AluJb SINE Alu 5 291 -21 732 193 25 0 chr18 26161908 26162027 -60515521 - FLAM_A SINE Alu -10 123 2 2216 163 3 3 chr18 26162122 26162459 -60515089 - MER1B DNA MER1_type 0 337 1 258 276 129 70 chr18 26164486 26164883 -60512665 + L1ME LINE L1 13 441 -5629 4015 267 66 42 chr18 26164987 26166854 -60510694 + L1ME LINE L1 451 2447 -3633 430 62 250 0 chr18 26166854 26166918 -60510630 - MADE1 DNA Mariner 0 80 1 4015 267 66 42 chr18 26166918 26168029 -60509519 + L1ME LINE L1 2447 3530 -2550 2294 66 0 0 chr18 26168045 26168319 -60509229 + AluY SINE Alu 35 308 -3 180 0 0 0 chr18 26168431 26168451 -60509097 + (A)n Simple_repeat Simple_repeat 1 20 0 530 224 37 0 chr18 26168689 26168796 -60508752 + MER94 DNA DNA 1 111 -23 24 0 0 0 chr18 26168959 26168983 -60508565 + AT_rich Low_complexity Low_complexity 1 24 0 303 265 20 0 chr18 26171210 26171312 -60506236 - MER103 DNA DNA -10 156 53 332 253 38 0 chr18 26171504 26171583 -60505965 - L2 LINE L2 -42 3271 3190 263 281 18 61 chr18 26171868 26171982 -60505566 + MIR SINE MIR 57 165 -97 294 132 0 0 chr18 26172899 26172952 -60504596 + (GA)n Simple_repeat Simple_repeat 1 53 0 664 242 115 0 chr18 26173086 26173268 -60504280 + L1MD2 LINE L1 6145 6347 -12 470 287 98 62 chr18 26174198 26174505 -60503043 + L3 LINE CR1 1249 1566 -11 437 269 87 43 chr18 26177285 26177493 -60500055 - MIR SINE MIR -16 246 30 383 172 66 98 chr18 26177611 26177733 -60499815 - MLT1H LTR MaLR -1 548 431 3214 133 13 36 chr18 26177931 26178480 -60499068 - MER34B LTR ERV1 -29 536 1 1553 182 71 25 chr18 26179061 26179289 -60498259 + MER44D DNA MER2_type 1 217 -2274 2163 111 7 0 chr18 26179289 26179577 -60497971 + AluSq SINE Alu 1 290 -23 1553 182 71 25 chr18 26179577 26179672 -60497876 + MER44D DNA MER2_type 217 609 0 242 212 93 50 chr18 26180483 26180613 -60496935 - MLT1G3 LTR MaLR -4 526 404 1915 215 57 64 chr18 26180781 26181363 -60496185 - MLT1E2 LTR MaLR -3 623 69 953 194 0 29 chr18 26181548 26181723 -60495825 - MER58B DNA MER1_type 0 341 172 2535 129 3 3 chr18 26182351 26182715 -60494833 - THE1B LTR MaLR 0 364 1 26 0 0 0 chr18 26183661 26183687 -60493861 + AT_rich Low_complexity Low_complexity 1 26 0 285 228 73 41 chr18 26184674 26184797 -60492751 - MLT1H LTR MaLR -315 234 108 892 291 99 62 chr18 26185043 26185097 -60492451 - MLT1L LTR MaLR -8 607 557 689 243 76 24 chr18 26185097 26185307 -60492241 + MER58A DNA MER1_type 1 221 -3 892 291 99 62 chr18 26185307 26185805 -60491743 - MLT1L LTR MaLR -58 557 34 261 228 8 134 chr18 26186386 26186513 -60491035 - MIR SINE MIR -2 260 150 261 0 0 0 chr18 26186515 26186544 -60491004 + (T)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr18 26186555 26186575 -60490973 + (C)n Simple_repeat Simple_repeat 1 20 0 593 184 22 44 chr18 26186680 26186836 -60490712 - FLAM_A SINE Alu 0 153 1 1021 169 43 0 chr18 26186836 26187020 -60490528 - MLT1D LTR MaLR -313 192 1 264 313 0 25 chr18 26187093 26187173 -60490375 - L2 LINE L2 -61 3211 3134 247 345 9 0 chr18 26187286 26187399 -60490149 - L2 LINE L2 -208 3064 2951 365 273 233 6 chr18 26187585 26187784 -60489764 - MIR SINE MIR -35 227 1 271 323 85 20 chr18 26187891 26188092 -60489456 - L2 LINE L2 -676 2638 2425 276 292 58 100 chr18 26189320 26189427 -60488121 + MIR SINE MIR 2 112 -150 2025 137 10 0 chr18 26189427 26189719 -60487829 - AluSq SINE Alu -18 295 1 276 292 58 100 chr18 26189719 26189851 -60487697 + MIR SINE MIR 112 231 -31 313 284 0 11 chr18 26189939 26190027 -60487521 + CT-rich Low_complexity Low_complexity 1 87 0 1373 158 0 0 chr18 26191889 26192098 -60485450 + AluJo SINE Alu 86 294 -18 49 71 0 0 chr18 26192288 26192386 -60485162 + AT_rich Low_complexity Low_complexity 1 98 0 247 324 19 19 chr18 26192831 26192939 -60484609 + MIR SINE MIR 148 255 -7 252 265 8 60 chr18 26193072 26193189 -60484359 + MIR SINE MIR 144 254 -8 2493 63 0 3 chr18 26193790 26194092 -60483456 + AluSc SINE Alu 1 301 -8 378 292 33 8 chr18 26195070 26195190 -60482358 - L2 LINE L2 0 3272 3150 2179 166 66 51 chr18 26195247 26195794 -60481754 - MER74A LTR ERVL -3 555 1 1866 171 0 10 chr18 26196057 26196366 -60481182 + AluJo SINE Alu 1 306 -6 338 343 57 17 chr18 26196598 26196773 -60480775 - MIR SINE MIR 0 262 81 280 237 178 8 chr18 26197380 26197498 -60480050 + MIR SINE MIR 48 185 -77 180 77 0 0 chr18 26198179 26198205 -60479343 + (CAAAC)n Simple_repeat Simple_repeat 3 28 0 2077 91 0 8 chr18 26198463 26198726 -60478822 + AluSx SINE Alu 13 273 -39 357 24 0 0 chr18 26198726 26198768 -60478780 + (TCTA)n Simple_repeat Simple_repeat 2 43 0 1877 99 0 34 chr18 26199167 26199430 -60478118 + AluSg SINE Alu 56 309 -1 300 91 0 0 chr18 26199530 26199574 -60477974 + (TC)n Simple_repeat Simple_repeat 2 45 0 1563 126 126 0 chr18 26199574 26199813 -60477735 - AluSg SINE Alu -41 269 1 237 303 0 0 chr18 26200616 26200715 -60476833 + (TG)n Simple_repeat Simple_repeat 1 99 0 361 331 75 0 chr18 26201747 26201880 -60475668 + MIR3 SINE MIR 58 200 -8 882 117 83 14 chr18 26202624 26202724 -60474824 + MLT2A1 LTR ERVL 290 404 -40 249 33 0 0 chr18 26202724 26202754 -60474794 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 882 117 83 14 chr18 26202754 26202798 -60474750 + MLT2A1 LTR ERVL 404 444 0 4298 115 25 2 chr18 26202798 26203443 -60474105 - L1PB4 LINE L1 -46 6110 5451 2354 96 0 6 chr18 26204082 26204396 -60473152 - AluSx SINE Alu 0 312 1 229 162 0 0 chr18 26204439 26204476 -60473072 - Tigger7 DNA MER2_type 0 2587 2551 * 1311 183 5 5 chr18 26204475 26204688 -60472860 - Tigger7 DNA MER2_type -520 213 1 224 250 62 16 chr18 26206347 26206411 -60471137 - L2 LINE L2 -36 3277 3211 736 227 48 37 chr18 26206504 26206579 -60470969 - L1M4 LINE L1 -1698 4448 4375 1889 132 30 17 chr18 26206579 26206874 -60470674 - AluJb SINE Alu -13 299 1 736 227 48 37 chr18 26206874 26207067 -60470481 - L1M4 LINE L1 -1771 4375 4177 794 212 141 0 chr18 26207069 26207253 -60470295 + L1ME LINE L1 5357 5566 -600 * 983 242 57 95 chr18 26207249 26207399 -60470149 - L1M4 LINE L1 -1978 4168 4014 1607 158 46 40 chr18 26207399 26207702 -60469846 - AluJo SINE Alu -2 310 6 983 242 57 95 chr18 26207702 26207735 -60469813 - L1M4 LINE L1 -2132 4014 3981 2086 142 0 0 chr18 26207735 26208038 -60469510 + AluSx SINE Alu 1 303 -9 983 242 57 95 chr18 26208038 26208452 -60469096 - L1M4 LINE L1 -2165 3981 3593 26 0 0 0 chr18 26208466 26208492 -60469056 + GC_rich Low_complexity Low_complexity 1 26 0 240 35 0 0 chr18 26208672 26208701 -60468847 + (A)n Simple_repeat Simple_repeat 1 29 0 191 299 31 21 chr18 26211499 26211596 -60465952 - MIR SINE MIR -113 149 52 240 59 0 0 chr18 26211887 26211921 -60465627 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 182 345 16 36 chr18 26211932 26212236 -60465312 - L2 LINE L2 -1406 1908 1611 828 219 31 31 chr18 26212297 26212489 -60465059 + MER3 DNA MER1_type 10 201 -8 270 0 0 0 chr18 26213360 26213390 -60464158 + (GA)n Simple_repeat Simple_repeat 1 30 0 257 218 228 10 chr18 26213477 26213578 -60463970 + MIR SINE MIR 120 242 -20 223 155 69 17 chr18 26216635 26216693 -60460855 + MIR SINE MIR 157 217 -45 1101 219 127 7 chr18 26218236 26218519 -60459029 - MLT1D LTR MaLR 0 505 189 2113 102 0 3 chr18 26318552 26318836 -60358712 + AluSg SINE Alu 26 308 -2 1374 303 7 30 chr18 26318836 26319082 -60358466 + L1 LINE L1 2508 2741 -3405 2417 76 3 13 chr18 26319082 26319384 -60358164 - AluSp SINE Alu -14 299 1 1374 303 7 30 chr18 26319384 26319569 -60357979 + L1 LINE L1 2741 2929 -3217 2789 26 0 0 chr18 26319569 26319878 -60357670 - AluYb8 SINE Alu -9 309 1 227 196 0 0 chr18 26320828 26320874 -60356674 + GA-rich Low_complexity Low_complexity 4 49 0 500 118 24 0 chr18 26320874 26320959 -60356589 + A-rich Low_complexity Low_complexity 3 89 0 3741 44 23 0 chr18 26321002 26321436 -60356112 - L1PA7 LINE L1 -4 6150 5707 23 0 0 0 chr18 26321924 26321947 -60355601 + AT_rich Low_complexity Low_complexity 1 23 0 39 38 0 0 chr18 26321988 26322041 -60355507 + AT_rich Low_complexity Low_complexity 1 53 0 345 255 43 43 chr18 26323521 26323662 -60353886 - MER5A DNA MER1_type -37 152 1 189 0 0 0 chr18 26323720 26323741 -60353807 + (TTTG)n Simple_repeat Simple_repeat 3 23 0 312 274 96 33 chr18 26324112 26324278 -60353270 - MIR3 SINE MIR -30 178 2 219 279 61 136 chr18 26324312 26324459 -60353089 - L2 LINE L2 0 3272 3137 2051 129 0 0 chr18 26325032 26325340 -60352208 + AluSg SINE Alu 1 308 0 2231 105 0 44 chr18 26325925 26326240 -60351308 + AluY SINE Alu 1 301 -10 799 332 32 21 chr18 26326465 26326839 -60350709 + MLT1I LTR MaLR 28 405 -4 195 333 0 0 chr18 26327219 26327285 -60350263 - MIR SINE MIR -91 171 106 307 359 95 30 chr18 26327776 26328582 -60348966 + L2 LINE L2 2013 2881 -433 282 265 37 52 chr18 26328808 26328944 -60348604 + L2 LINE L2 3180 3313 0 1491 205 0 48 chr18 26330300 26330612 -60346936 + AluJo SINE Alu 3 299 -13 888 288 21 12 chr18 26330618 26330861 -60346687 - MIR SINE MIR -10 252 8 2324 246 65 37 chr18 26330911 26331372 -60346176 + L2 LINE L2 2090 2579 -735 2502 76 0 3 chr18 26331372 26331686 -60345862 + AluSq SINE Alu 1 313 0 2324 246 65 37 chr18 26331686 26331931 -60345617 + L2 LINE L2 2579 2816 -498 183 156 0 0 chr18 26331974 26332006 -60345542 + CT-rich Low_complexity Low_complexity 2 33 0 540 301 13 59 chr18 26333213 26333305 -60344243 - MIR SINE MIR -14 248 153 2296 78 0 0 chr18 26333305 26333617 -60343931 - AluY SINE Alu 0 312 1 540 301 13 59 chr18 26333617 26333759 -60343789 - MIR SINE MIR -109 153 24 267 56 0 0 chr18 26335139 26335175 -60342373 + U5 snRNA snRNA 1 36 -80 442 289 73 28 chr18 26335387 26335605 -60341943 + MIR SINE MIR 34 261 -1 473 92 13 0 chr18 26338177 26338253 -60339295 + (TGAA)n Simple_repeat Simple_repeat 3 79 0 202 353 43 52 chr18 26338414 26338530 -60339018 + L2 LINE L2 2971 3085 -187 515 317 98 50 chr18 26339238 26339333 -60338215 - L2 LINE L2 -9 3263 3174 2479 57 0 3 chr18 26339333 26339648 -60337900 + L1PA8 LINE L1 5855 6168 -4 515 317 98 50 chr18 26339648 26339890 -60337658 - L2 LINE L2 -98 3174 2910 421 304 56 6 chr18 26340584 26340745 -60336803 + MLT1L LTR MaLR 364 532 -83 191 61 30 0 chr18 26340841 26340874 -60336674 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1793 177 0 3 chr18 26340876 26341158 -60336390 - AluJb SINE Alu -27 285 5 244 274 14 27 chr18 26341160 26341233 -60336315 - MIR SINE MIR -55 153 82 220 333 28 0 chr18 26341536 26341608 -60335940 - L2 LINE L2 -48 3265 3192 663 318 10 0 chr18 26342643 26342835 -60334713 + MIR SINE MIR 62 255 -7 246 220 0 0 chr18 26343043 26343093 -60334455 + L2 LINE L2 3259 3308 -5 338 281 242 17 chr18 26343328 26343506 -60334042 - MIR SINE MIR -17 245 28 21 0 0 0 chr18 26346823 26346844 -60330704 + AT_rich Low_complexity Low_complexity 1 21 0 2291 116 7 0 chr18 26348773 26349076 -60328472 + AluSq SINE Alu 1 305 -8 331 216 17 60 chr18 26349263 26349379 -60328169 - L1ME1 LINE L1 -27 6139 6029 2540 264 36 13 chr18 26349523 26350386 -60327162 - L1MEc LINE L1 -5469 927 45 259 188 0 25 chr18 26350865 26350945 -60326603 + GA-rich Low_complexity Low_complexity 2 79 0 590 252 56 33 chr18 26351580 26351794 -60325754 - MER20 DNA MER1_type 0 219 1 181 359 87 0 chr18 26351811 26351903 -60325645 + MIR SINE MIR 28 127 -135 393 58 0 0 chr18 26353067 26353119 -60324429 + (GA)n Simple_repeat Simple_repeat 1 52 0 1109 265 78 42 chr18 26353201 26353774 -60323774 + MLT2F LTR ERVL 1 594 -69 2124 124 32 13 chr18 26353783 26354162 -60323386 - L1MA4 LINE L1 -11 6289 5904 239 385 0 0 chr18 26354483 26354579 -60322969 - MIR SINE MIR -108 154 59 535 279 55 12 chr18 26354791 26354956 -60322592 - MIR SINE MIR -71 191 20 1446 183 17 45 chr18 26356110 26356406 -60321142 - L1MB7 LINE L1 -19 6165 5879 2421 71 7 0 chr18 26356406 26356702 -60320846 - AluSp SINE Alu -10 303 6 1446 183 17 45 chr18 26356702 26356760 -60320788 - L1MB7 LINE L1 -305 5879 5821 4064 174 32 34 chr18 26356793 26358485 -60319063 - L1MB8 LINE L1 0 6178 4485 180 111 0 0 chr18 26358485 26358512 -60319036 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1547 194 25 11 chr18 26358517 26358795 -60318753 - AluJo SINE Alu -30 282 1 4064 174 32 34 chr18 26358795 26358935 -60318613 - L1MB8 LINE L1 -1697 4481 4345 739 337 145 45 chr18 26359817 26361220 -60316328 + L2 LINE L2 1706 3271 -1 249 358 25 31 chr18 26361242 26361404 -60316144 + MIR SINE MIR 92 252 -10 14461 131 25 18 chr18 26361997 26364399 -60313149 - Tigger1 DNA MER2_type 0 2418 1 238 181 60 36 chr18 26364631 26364714 -60312834 + L1ME LINE L1 5756 5840 -281 210 261 62 31 chr18 26365539 26365604 -60311944 - MIR SINE MIR -162 100 34 382 314 135 34 chr18 26368358 26368766 -60308782 + L1M4 LINE L1 4234 4682 -1464 1426 108 0 5 chr18 26368774 26368960 -60308588 + AluSx SINE Alu 5 189 -123 201 359 106 0 chr18 26369233 26369375 -60308173 + L2 LINE L2 189 345 -2969 200 118 0 59 chr18 26369651 26369702 -60307846 + (T)n Simple_repeat Simple_repeat 1 48 0 13083 15 0 0 chr18 26369703 26372060 -60305488 - L1HS LINE L1 -2 6153 3797 203 261 14 14 chr18 26372708 26372777 -60304771 + (CATA)n Simple_repeat Simple_repeat 3 71 0 415 289 109 6 chr18 26372880 26373036 -60304512 - MIR SINE MIR -72 190 19 425 293 42 52 chr18 26373187 26373378 -60304170 - MER5A DNA MER1_type 0 189 1 183 236 55 18 chr18 26373902 26373957 -60303591 + MER5C DNA MER1_type 87 143 -181 267 355 46 0 chr18 26374338 26374490 -60303058 - L2 LINE L2 -592 2722 2564 1956 154 0 0 chr18 26374613 26374912 -60302636 + AluJb SINE Alu 1 299 -13 3267 132 19 8 chr18 26375125 26375840 -60301708 - L1 LINE L1 -3712 3853 3124 776 158 32 13 chr18 26375817 26375975 -60301573 - L1 LINE L1 -7387 178 18 * 974 278 38 35 chr18 26376233 26376600 -60300948 - MLT1I LTR MaLR -39 370 3 462 340 60 14 chr18 26376682 26376897 -60300651 - MIR SINE MIR -16 246 22 493 240 223 25 chr18 26378604 26378846 -60298702 + LTR16C LTR ERVL 191 480 -11 459 0 0 0 chr18 26379608 26379659 -60297889 + (CA)n Simple_repeat Simple_repeat 2 52 0 396 333 97 56 chr18 26380022 26380413 -60297135 + L2 LINE L2 2824 3230 -42 224 305 0 49 chr18 26381928 26382010 -60295538 - L3b LINE CR1 -157 1426 1349 246 268 14 0 chr18 26382502 26382573 -60294975 + CT-rich Low_complexity Low_complexity 2 73 0 252 0 0 0 chr18 26382699 26382727 -60294821 + (TG)n Simple_repeat Simple_repeat 2 29 0 6634 137 66 7 chr18 26382730 26383889 -60293659 + Tigger3b DNA MER2_type 1 1228 -3 1447 171 33 20 chr18 26383913 26384217 -60293331 - L1MC1 LINE L1 -8 6325 6018 897 135 0 14 chr18 26384554 26384702 -60292846 + AluJb SINE Alu 165 310 -2 289 323 89 24 chr18 26385551 26385675 -60291873 - L2 LINE L2 -2 3270 3139 1122 169 46 50 chr18 26386003 26386046 -60291502 - MER33 DNA MER1_type -2261 324 282 2077 113 23 0 chr18 26386046 26386348 -60291200 - AluSg1 SINE Alu 0 309 1 1122 169 46 50 chr18 26386348 26386606 -60290942 - MER33 DNA MER1_type -2303 282 24 192 344 22 72 chr18 26387274 26387415 -60290133 + MIR SINE MIR 2 134 -128 3753 110 37 0 chr18 26387415 26387960 -60289588 - MER61E LTR ERV1 -4 565 1 192 344 22 72 chr18 26387960 26387998 -60289550 + MIR SINE MIR 134 172 -90 900 176 10 31 chr18 26388072 26388265 -60289283 + MER5A DNA MER1_type 1 189 0 263 259 0 0 chr18 26388312 26388370 -60289178 - L3b LINE CR1 -152 1431 1374 243 0 0 0 chr18 26389891 26389918 -60287630 + (T)n Simple_repeat Simple_repeat 1 27 0 2090 145 0 10 chr18 26390860 26391170 -60286378 + AluSx SINE Alu 1 307 -5 338 203 8 93 chr18 26391390 26391508 -60286040 - L1MB8 LINE L1 -8 6170 6063 643 218 69 0 chr18 26391508 26391682 -60285866 - L1ME1 LINE L1 -341 5894 5709 383 132 59 0 chr18 26391693 26391761 -60285787 - Tigger5 DNA MER2_type -7 2316 2245 * 1230 209 4 0 chr18 26391757 26391982 -60285566 - Tigger5 DNA MER2_type -2097 226 1 891 243 10 27 chr18 26391986 26392286 -60285262 - L1ME1 LINE L1 -607 5626 5332 1832 256 61 18 chr18 26392398 26393279 -60284269 - L1ME1 LINE L1 -2874 3341 2423 272 258 0 0 chr18 26393283 26393349 -60284199 - L1ME1 LINE L1 -6296 100 35 * 287 249 108 68 chr18 26393346 26393678 -60283870 - L1MDa LINE L1 -4651 1775 1352 2348 203 24 33 chr18 26394050 26394484 -60283064 + L1MD2 LINE L1 5779 6208 -151 15068 50 1 4 chr18 26394484 26397170 -60280378 + L1PA5 LINE L1 3464 6150 -4 2348 203 24 33 chr18 26397170 26397311 -60280237 + L1MD2 LINE L1 6208 6349 -10 915 287 117 15 chr18 26397333 26397804 -60279744 + L1MC4 LINE L1 7257 7775 -267 2037 172 85 14 chr18 26398001 26398262 -60279286 - MLT1C LTR MaLR 0 467 161 456 35 0 0 chr18 26398262 26398320 -60279228 + (TG)n Simple_repeat Simple_repeat 2 59 0 2037 172 85 14 chr18 26398320 26398494 -60279054 - MLT1C LTR MaLR -306 161 1 248 284 22 67 chr18 26399495 26399629 -60277919 + L1ME LINE L1 5635 5762 -359 21 0 0 0 chr18 26400441 26400462 -60277086 + AT_rich Low_complexity Low_complexity 1 21 0 1503 148 0 94 chr18 26401162 26401269 -60276279 + AluSx SINE Alu 44 159 -153 2482 61 0 13 chr18 26401269 26401579 -60275969 + AluY SINE Alu 1 306 -5 1503 148 0 94 chr18 26401579 26401768 -60275780 + AluSx SINE Alu 159 312 0 438 193 224 62 chr18 26402225 26402267 -60275281 - MIR SINE MIR -62 200 166 1772 133 97 0 chr18 26402267 26402576 -60274972 + MER44D DNA MER2_type 1 609 0 438 193 224 62 chr18 26402576 26402694 -60274854 - MIR SINE MIR -96 166 14 567 229 0 0 chr18 26404977 26405121 -60272427 + (TG)n Simple_repeat Simple_repeat 1 144 0 274 206 29 15 chr18 26405537 26405605 -60271943 - MER110 LTR ERV1 0 491 423 434 221 10 0 chr18 26405882 26405986 -60271562 - MER110A LTR ERV1 -295 173 69 2067 119 0 0 chr18 26406845 26407123 -60270425 + AluSx SINE Alu 24 301 -11 344 285 109 27 chr18 26407663 26407884 -60269664 - LTR16A LTR ERVL -6 444 206 342 355 44 18 chr18 26408228 26408748 -60268800 - ERVL LTR ERVL -224 5261 4728 193 331 16 50 chr18 26409570 26409691 -60267857 - MIR SINE MIR -48 214 98 195 211 79 0 chr18 26409867 26409905 -60267643 + L2 LINE L2 3199 3239 -33 213 336 0 17 chr18 26409992 26410108 -60267440 + (TATATG)n Simple_repeat Simple_repeat 2 115 0 785 188 0 7 chr18 26411494 26411648 -60265900 - L1MA10 LINE L1 -11 6323 6171 345 179 0 63 chr18 26411692 26411787 -60265761 - L1ME1 LINE L1 -179 5987 5899 400 228 48 7 chr18 26411798 26411943 -60265605 - L1M4 LINE L1 -1567 4579 4429 1880 276 61 13 chr18 26412009 26413255 -60264293 - L1M4 LINE L1 -1743 4403 3062 1650 82 3 82 chr18 26413506 26413798 -60263750 + THE1C-int LTR MaLR 1312 1580 0 1995 114 108 9 chr18 26413798 26414139 -60263409 + THE1C LTR MaLR 1 375 0 443 290 72 21 chr18 26414214 26414428 -60263120 + L1ME4a LINE L1 5575 5808 -313 709 254 38 34 chr18 26414428 26414637 -60262911 - MER63A DNA MER1_type 0 210 1 443 290 72 21 chr18 26414637 26414701 -60262847 + L1ME4a LINE L1 5808 5867 -254 1764 179 14 0 chr18 26414828 26415113 -60262435 + AluJb SINE Alu 1 289 -23 228 145 26 13 chr18 26415125 26415201 -60262347 + (TATAA)n Simple_repeat Simple_repeat 3 79 0 795 268 32 14 chr18 26415382 26415602 -60261946 + MER58A DNA MER1_type 1 224 0 1598 172 35 10 chr18 26415770 26416060 -60261488 - AluJb SINE Alu -15 297 1 1498 117 36 5 chr18 26416880 26417103 -60260445 + MER30 DNA MER1_type 1 230 0 1716 156 75 9 chr18 26417170 26417504 -60260044 - MLT1A1 LTR MaLR 0 365 10 209 122 0 24 chr18 26417793 26417834 -60259714 + (TG)n Simple_repeat Simple_repeat 1 40 0 401 362 74 56 chr18 26417924 26418261 -60259287 - L2 LINE L2 -21 3251 2909 354 303 9 0 chr18 26418586 26418695 -60258853 - L2 LINE L2 -2 3311 3202 203 358 12 0 chr18 26419085 26419166 -60258382 + L2 LINE L2 3204 3285 -28 223 338 162 29 chr18 26419436 26419572 -60257976 - MIR SINE MIR -81 181 28 717 149 91 0 chr18 26421250 26421371 -60256177 + FLAM_C SINE Alu 2 133 0 26 0 0 0 chr18 26421371 26421397 -60256151 + AT_rich Low_complexity Low_complexity 1 26 0 344 265 14 27 chr18 26421525 26421672 -60255876 + L1ME LINE L1 5541 5685 -436 883 245 9 0 chr18 26421733 26421949 -60255599 - L1ME2 LINE L1 -9 6155 5938 2110 119 0 3 chr18 26421962 26422256 -60255292 + AluSg SINE Alu 1 293 -17 635 196 17 11 chr18 26422293 26422472 -60255076 + (TA)n Simple_repeat Simple_repeat 1 180 0 21 0 0 0 chr18 26422472 26422493 -60255055 + AT_rich Low_complexity Low_complexity 1 21 0 401 196 155 10 chr18 26423010 26423107 -60254441 - MER81 DNA DNA -1 113 3 792 258 122 4 chr18 26425214 26425443 -60252105 - MIR SINE MIR 0 262 7 297 0 0 0 chr18 26425590 26425623 -60251925 + (TG)n Simple_repeat Simple_repeat 2 34 0 303 282 0 0 chr18 26425944 26426022 -60251526 - MER117 DNA MER1_type -118 79 2 2415 90 3 0 chr18 26426202 26426501 -60251047 + AluSp SINE Alu 1 300 -13 255 299 0 15 chr18 26428652 26428719 -60248829 - L2 LINE L2 -6 3266 3201 250 313 122 9 chr18 26428785 26428900 -60248648 + MIR SINE MIR 46 173 -89 386 282 158 57 chr18 26428903 26429322 -60248226 + L2 LINE L2 2244 2704 -610 1846 232 68 67 chr18 26429362 26431369 -60246179 - L1MC4 LINE L1 -757 5389 4962 2075 123 0 26 chr18 26431369 26431671 -60245877 - AluSc SINE Alu -15 294 1 1846 232 68 67 chr18 26431671 26431809 -60245739 - L1MC4 LINE L1 -1184 4962 4826 1448 197 7 27 chr18 26431853 26432153 -60245395 + AluJo SINE Alu 1 294 -18 343 256 33 0 chr18 26432420 26432510 -60245038 + MLT1G LTR MaLR 464 556 -34 2519 204 119 43 chr18 26432543 26433967 -60243581 + L1ME3 LINE L1 4101 5629 -535 659 242 143 55 chr18 26433974 26434295 -60243253 + L1ME3 LINE L1 5692 6050 -112 1329 82 115 10 chr18 26434295 26434503 -60243045 - MER30 DNA MER1_type 0 230 1 659 242 143 55 chr18 26434503 26434544 -60243004 + L1ME3 LINE L1 6050 6086 -76 325 299 49 28 chr18 26434606 26434750 -60242798 + L2 LINE L2 3110 3256 -57 23 33 0 0 chr18 26435287 26435317 -60242231 + AT_rich Low_complexity Low_complexity 1 30 0 6397 107 26 15 chr18 26435317 26435573 -60241975 - L1MA3 LINE L1 0 6305 6053 2490 51 3 0 chr18 26435573 26435866 -60241682 - AluY SINE Alu -17 294 1 6397 107 26 15 chr18 26435866 26436779 -60240769 - L1MA3 LINE L1 -252 6053 5130 3038 204 11 50 chr18 26436759 26437193 -60240355 - L1 LINE L1 -2804 3342 2893 * 2839 25 0 0 chr18 26437193 26437511 -60240037 + AluYb8 SINE Alu 1 318 0 3038 204 11 50 chr18 26437511 26437697 -60239851 - L1 LINE L1 -3253 2893 2701 2414 76 3 13 chr18 26437697 26437999 -60239549 + AluSp SINE Alu 1 299 -14 3038 204 11 50 chr18 26437999 26438245 -60239303 - L1 LINE L1 -3445 2701 2508 2000 144 0 7 chr18 26438245 26438551 -60238997 - AluSg SINE Alu -2 308 5 351 271 58 85 chr18 26438687 26438945 -60238603 + MLT1I LTR MaLR 159 409 0 4952 83 7 0 chr18 26438968 26439763 -60237785 - L1P3 LINE L1 -691 5463 4666 23 54 0 0 chr18 26439940 26439977 -60237571 + AT_rich Low_complexity Low_complexity 1 37 0 1746 151 3 71 chr18 26440789 26441114 -60236434 - AluJb SINE Alu -9 303 1 592 129 0 0 chr18 26441256 26441349 -60236199 - L1PB4 LINE L1 -180 5976 5884 350 172 115 0 chr18 26441525 26441612 -60235936 - L2 LINE L2 -1 3312 3216 30 27 0 0 chr18 26441709 26441746 -60235802 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr18 26442056 26442080 -60235468 + AT_rich Low_complexity Low_complexity 1 24 0 2312 82 0 20 chr18 26442449 26442754 -60234794 - AluSq SINE Alu -14 299 1 606 137 0 20 chr18 26442776 26442878 -60234670 - MLT1A1 LTR MaLR -265 100 1 287 258 55 28 chr18 26443313 26443421 -60234127 - MLT1I LTR MaLR -78 331 232 240 221 131 62 chr18 26443426 26443571 -60233977 - MLT1H LTR MaLR -22 527 373 4027 99 55 175 chr18 26443864 26444223 -60233325 - THE1C-int LTR MaLR -707 873 473 756 141 0 0 chr18 26444223 26444344 -60233204 + AluSg/x SINE Alu 186 306 -3 4027 99 55 175 chr18 26444344 26444855 -60232693 - THE1C-int LTR MaLR -1107 473 1 2028 116 99 9 chr18 26444855 26445199 -60232349 - THE1C LTR MaLR 0 375 1 30 27 0 0 chr18 26445259 26445296 -60232252 + AT_rich Low_complexity Low_complexity 1 37 0 466 316 71 21 chr18 26445317 26445599 -60231949 - L1M4 LINE L1 -754 5392 5097 10581 208 31 41 chr18 26445825 26448074 -60229474 - L1MA9 LINE L1 -21 7312 5041 306 50 0 0 chr18 26448074 26448114 -60229434 + (TG)n Simple_repeat Simple_repeat 2 41 0 10581 208 31 41 chr18 26448114 26450025 -60227523 - L1MA9 LINE L1 -2292 5041 3212 7223 45 7 2 chr18 26450025 26451171 -60226377 + L1PA5 LINE L1 5000 6149 -5 10581 208 31 41 chr18 26451171 26451478 -60226070 - L1MA9 LINE L1 -4121 3212 2903 776 230 0 0 chr18 26451619 26451771 -60225777 + FRAM SINE Alu 13 164 -12 6120 250 36 35 chr18 26451816 26454811 -60222737 - L1MA9 LINE L1 -4161 3007 14 886 134 0 0 chr18 26455036 26455163 -60222385 - FLAM_C SINE Alu -6 127 1 419 319 55 18 chr18 26455601 26455764 -60221784 + MIR SINE MIR 91 259 -3 2295 225 73 44 chr18 26455975 26456655 -60220893 - L1ME1 LINE L1 0 6961 6302 209 33 33 0 chr18 26456655 26456685 -60220863 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 2295 225 73 44 chr18 26456685 26456872 -60220676 - L1ME1 LINE L1 -659 6302 6122 2065 122 30 0 chr18 26456872 26457168 -60220380 - AluSx SINE Alu -7 305 1 2295 225 73 44 chr18 26457168 26457573 -60219975 - L1ME1 LINE L1 -839 6122 5642 1710 179 10 17 chr18 26457628 26457793 -60219755 - AluJb SINE Alu -23 289 125 288 0 0 0 chr18 26457793 26457825 -60219723 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1710 179 10 17 chr18 26457825 26457950 -60219598 - AluJb SINE Alu -187 125 1 1219 231 76 2 chr18 26457950 26458369 -60219179 - L1ME1 LINE L1 -3118 3823 3374 921 262 22 108 chr18 26458401 26458603 -60218945 - L1ME1 LINE L1 -4396 2726 2508 2299 180 24 2 chr18 26458603 26459020 -60218528 - MSTB LTR MaLR 0 426 1 921 262 22 108 chr18 26459020 26459270 -60218278 - L1ME1 LINE L1 -4614 2508 2365 4868 36 2 2 chr18 26459270 26459856 -60217692 + L1PA4 LINE L1 5567 6152 -3 921 262 22 108 chr18 26459856 26460173 -60217375 - L1ME1 LINE L1 -4757 2365 2022 * 1617 249 34 37 chr18 26460168 26461060 -60216488 - L1ME1 LINE L1 -4887 1536 817 379 321 102 19 chr18 26461271 26461645 -60215903 - L1ME1 LINE L1 -5994 429 25 263 243 33 125 chr18 26461817 26461969 -60215579 - MIR SINE MIR -39 223 86 725 212 287 25 chr18 26466242 26466681 -60210867 + L1MC4 LINE L1 7489 8042 0 213 39 0 0 chr18 26468969 26468995 -60208553 + (T)n Simple_repeat Simple_repeat 1 26 0 204 135 27 0 chr18 26470660 26470697 -60206851 + (CATATA)n Simple_repeat Simple_repeat 3 40 0 21 0 0 0 chr18 26471060 26471081 -60206467 + AT_rich Low_complexity Low_complexity 1 21 0 232 161 0 18 chr18 26471090 26471146 -60206402 - L1ME4a LINE L1 -11 6110 6056 52 93 0 0 chr18 26471168 26471318 -60206230 + AT_rich Low_complexity Low_complexity 1 150 0 347 253 22 39 chr18 26471321 26471503 -60206045 + (TA)n Simple_repeat Simple_repeat 1 179 0 245 315 116 43 chr18 26471534 26471810 -60205738 - L1ME4a LINE L1 -251 5870 5575 24 67 0 0 chr18 26472970 26473015 -60204533 + AT_rich Low_complexity Low_complexity 1 45 0 550 272 61 133 chr18 26473324 26474155 -60203393 + L2 LINE L2 2494 3272 0 430 200 0 0 chr18 26475215 26475300 -60202248 + Charlie5 DNA MER1_type 6 90 -2522 1618 201 5 5 chr18 26475329 26475717 -60201831 + Charlie5 DNA MER1_type 2236 2623 0 326 284 43 17 chr18 26475767 26475883 -60201665 + MER5B DNA MER1_type 54 172 -6 343 293 24 73 chr18 26476051 26476215 -60201333 - MIR SINE MIR 0 262 107 211 352 23 0 chr18 26479044 26479132 -60198416 - L2 LINE L2 -24 3289 3200 218 312 169 32 chr18 26479968 26480122 -60197426 - MIR SINE MIR -40 222 48 266 353 73 0 chr18 26480171 26480321 -60197227 - MIR SINE MIR -48 214 54 201 297 168 20 chr18 26480385 26480486 -60197062 + MIR SINE MIR 29 144 -64 303 319 17 8 chr18 26480615 26480734 -60196814 + L1ME3A LINE L1 5832 5951 -219 34 24 0 0 chr18 26480746 26480787 -60196761 + AT_rich Low_complexity Low_complexity 1 41 0 970 234 120 13 chr18 26480892 26481248 -60196300 + L1 LINE L1 4602 5019 -1127 5966 160 28 6 chr18 26481277 26482454 -60195094 + L1MC1 LINE L1 5131 6332 -1 5603 163 26 17 chr18 26482450 26484003 -60193545 + L1MA10 LINE L1 4762 6327 -7 * 514 294 27 16 chr18 26484563 26484750 -60192798 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr18 26484815 26484836 -60192712 + AT_rich Low_complexity Low_complexity 1 21 0 207 345 0 0 chr18 26486814 26486901 -60190647 + A-rich Low_complexity Low_complexity 3 89 0 21 100 0 0 chr18 26487382 26487452 -60190096 + AT_rich Low_complexity Low_complexity 1 70 0 312 273 55 77 chr18 26487461 26487955 -60189593 - L1ME4a LINE L1 -26 6095 5613 1129 188 43 0 chr18 26487962 26488170 -60189378 - AluJo SINE Alu -7 305 89 240 232 0 0 chr18 26488203 26488259 -60189289 - L1ME4a LINE L1 -535 5586 5531 189 385 63 38 chr18 26489159 26489556 -60187992 - L2 LINE L2 -373 2941 2535 1021 226 70 29 chr18 26490569 26490910 -60186638 + MER113 DNA MER1_type? 91 445 -76 971 220 68 4 chr18 26490935 26491171 -60186377 - MIR SINE MIR -10 252 2 31 68 0 0 chr18 26491442 26491501 -60186047 + AT_rich Low_complexity Low_complexity 1 59 0 22 70 0 0 chr18 26491654 26491697 -60185851 + AT_rich Low_complexity Low_complexity 1 43 0 231 36 0 0 chr18 26491724 26491752 -60185796 + (CA)n Simple_repeat Simple_repeat 1 28 0 264 313 68 49 chr18 26491887 26492050 -60185498 - MIR SINE MIR -93 169 4 11269 215 55 11 chr18 26492164 26492544 -60185004 - L1MB1 LINE L1 0 6404 6042 306 50 0 0 chr18 26492544 26492584 -60184964 + (CA)n Simple_repeat Simple_repeat 2 41 0 11269 215 55 11 chr18 26492584 26493433 -60184115 - L1MB1 LINE L1 -362 6042 5232 4721 173 66 3 chr18 26493433 26494281 -60183267 - MER54A LTR ERVL 0 901 1 11269 215 55 11 chr18 26494281 26494928 -60182620 - L1MB1 LINE L1 -1172 5232 4615 219 36 0 0 chr18 26494928 26494956 -60182592 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 423 0 0 0 chr18 26494955 26495002 -60182546 + (TG)n Simple_repeat Simple_repeat 2 48 0 11269 215 55 11 chr18 26494956 26497528 -60180020 - L1MB1 LINE L1 -1789 4615 1722 6501 33 0 1 chr18 26497530 26498309 -60179239 - L1PA4 LINE L1 -2 6153 5376 2376 255 23 29 chr18 26498287 26498748 -60178800 - L1MB1 LINE L1 -4516 1787 1325 * 1709 185 3 17 chr18 26498748 26499046 -60178502 - AluJb SINE Alu -18 294 1 2277 100 6 13 chr18 26499055 26499366 -60178182 - AluSx SINE Alu -3 309 1 2376 255 23 29 chr18 26499366 26499867 -60177681 - L1MB1 LINE L1 -4986 1317 800 885 286 35 75 chr18 26500232 26500683 -60176865 - L1MB1 LINE L1 -5458 845 413 21 36 0 0 chr18 26500708 26500736 -60176812 + AT_rich Low_complexity Low_complexity 1 28 0 414 57 0 0 chr18 26501571 26501624 -60175924 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2280 109 0 0 chr18 26501629 26501922 -60175626 - AluSx SINE Alu -19 293 1 4107 216 74 34 chr18 26502269 26503600 -60173948 + L1MD2 LINE L1 3918 5372 -987 984 107 7 0 chr18 26503600 26503740 -60173808 + L1MA2 LINE L1 6164 6304 0 4107 216 74 34 chr18 26503740 26504587 -60172961 + L1MD2 LINE L1 5372 6184 -175 636 228 31 0 chr18 26504695 26504857 -60172691 + L1MD3 LINE L1 7823 7989 -6 1281 200 94 0 chr18 26505444 26505699 -60171849 - AluJb SINE Alu -33 279 1 191 269 90 90 chr18 26505813 26505980 -60171568 + L2 LINE L2 3009 3175 -97 23 0 0 0 chr18 26507785 26507808 -60169740 + AT_rich Low_complexity Low_complexity 1 23 0 409 354 25 0 chr18 26509453 26509614 -60167934 + L2 LINE L2 2888 3052 -220 230 281 42 10 chr18 26513431 26513527 -60164021 - L1MEd LINE L1 -5114 1005 907 2303 150 13 3 chr18 26514832 26515218 -60162330 - MLT1B LTR MaLR 0 390 1 36 62 0 0 chr18 26515529 26515593 -60161955 + AT_rich Low_complexity Low_complexity 1 64 0 1396 292 57 9 chr18 26515747 26516291 -60161257 - L1MC4a LINE L1 -1871 5937 5368 1627 152 67 11 chr18 26516296 26516579 -60160969 + AluSx SINE Alu 1 299 -13 475 266 59 27 chr18 26516829 26517147 -60160401 + L1M4 LINE L1 4493 4828 -1318 317 296 96 0 chr18 26517147 26517272 -60160276 + L1PB2 LINE L1 4883 5019 -1127 1424 236 25 75 chr18 26517284 26517806 -60159742 + L1PB2 LINE L1 5516 6011 -140 * 2678 187 18 28 chr18 26517339 26517996 -60159552 + L1MA7 LINE L1 5549 6281 -10 1110 306 69 32 chr18 26518331 26518424 -60159124 - LTR16A LTR ERVL 0 450 362 2202 166 38 24 chr18 26518424 26518875 -60158673 + MSTB2 LTR MaLR 1 457 0 1110 306 69 32 chr18 26518875 26518975 -60158573 - LTR16A LTR ERVL -88 362 267 735 276 130 84 chr18 26518975 26519544 -60158004 + MLT1G1 LTR MaLR 1 595 0 1110 306 69 32 chr18 26519544 26519783 -60157765 - LTR16A LTR ERVL -183 267 1 425 322 56 34 chr18 26519892 26520212 -60157336 - ERVL LTR ERVL -375 5389 5063 1260 338 61 29 chr18 26520242 26520996 -60156552 - ERVL LTR ERVL -1255 4509 3732 1409 265 105 35 chr18 26520998 26521484 -60156064 - MLT1G1 LTR MaLR 0 595 76 2237 339 72 26 chr18 26521545 26522163 -60155385 - ERVL LTR ERVL -2067 3697 3109 1982 100 65 0 chr18 26522163 26522442 -60155106 + AluSx SINE Alu 1 297 -15 2237 339 72 26 chr18 26522442 26523411 -60154137 - ERVL LTR ERVL -2655 3109 1979 777 319 11 36 chr18 26523401 26523808 -60153740 - ERVL LTR ERVL -3121 1875 1417 * 898 261 106 19 chr18 26523919 26524394 -60153154 - MLT1H1 LTR MaLR -43 512 8 571 155 0 86 chr18 26524446 26524527 -60153021 + LTR40a LTR ERVL 5 75 -444 1898 133 37 3 chr18 26524527 26524827 -60152721 - AluSx SINE Alu -1 311 2 571 155 0 86 chr18 26524827 26524861 -60152687 + LTR40a LTR ERVL 75 110 -409 202 244 0 0 chr18 26525646 26525687 -60151861 + MIR SINE MIR 219 259 -3 285 316 26 26 chr18 26525952 26526066 -60151482 + MER94 DNA DNA 21 134 0 409 319 114 55 chr18 26526324 26526798 -60150750 + L2 LINE L2 1910 2411 -903 366 334 158 24 chr18 26527028 26527117 -60150431 + L2 LINE L2 2462 2538 -734 2520 116 3 19 chr18 26527117 26527495 -60150053 - THE1C LTR MaLR 0 375 4 366 334 158 24 chr18 26527495 26527959 -60149589 + L2 LINE L2 2538 3090 -182 295 241 13 0 chr18 26527975 26528054 -60149494 - MER116 DNA Mariner 0 80 1 488 239 124 0 chr18 26528062 26528175 -60149373 + L2 LINE L2 3187 3313 0 223 356 40 27 chr18 26529356 26529505 -60148043 + MIR3 SINE MIR 55 205 -3 3455 152 67 18 chr18 26529826 26530502 -60147046 - L1MA9 LINE L1 0 6312 5604 28 48 0 0 chr18 26531077 26531119 -60146429 + AT_rich Low_complexity Low_complexity 1 42 0 484 220 67 147 chr18 26531270 26531325 -60146223 - L2 LINE L2 0 3313 3255 2313 90 0 10 chr18 26531325 26531635 -60145913 - AluY SINE Alu 0 311 5 484 220 67 147 chr18 26531635 26531925 -60145623 - L2 LINE L2 -58 3255 2996 2113 138 0 3 chr18 26532258 26532556 -60144992 - AluSx SINE Alu -15 297 1 2356 100 0 3 chr18 26532627 26532926 -60144622 - AluSx SINE Alu -14 298 1 315 344 0 0 chr18 26533167 26533257 -60144291 + L1MC4 LINE L1 6613 6702 -1340 1959 126 31 0 chr18 26533415 26533701 -60143847 + AluSx SINE Alu 1 295 -17 22 35 0 0 chr18 26533703 26533732 -60143816 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr18 26534003 26534031 -60143517 + AT_rich Low_complexity Low_complexity 1 28 0 532 342 57 38 chr18 26534520 26534783 -60142765 + L3b LINE CR1 1284 1551 -32 326 193 24 24 chr18 26534911 26534994 -60142554 - MER63 DNA MER1_type -976 85 3 778 250 88 17 chr18 26535001 26535362 -60142186 + L2 LINE L2 2625 3006 -307 817 146 8 0 chr18 26535387 26535510 -60142038 + FLAM_C SINE Alu 9 132 -11 684 263 29 14 chr18 26535532 26535741 -60141807 + MLT1H LTR MaLR 117 328 -221 573 200 161 39 chr18 26536848 26537003 -60140545 + MER5A DNA MER1_type 10 183 -6 2279 115 0 0 chr18 26537240 26537545 -60140003 - AluSc SINE Alu -4 305 1 187 308 29 58 chr18 26538027 26538131 -60139417 + MIR SINE MIR 162 262 0 225 289 64 92 chr18 26540052 26540301 -60137247 + MIR SINE MIR 8 249 -13 223 261 0 31 chr18 26542525 26542590 -60134958 + GA-rich Low_complexity Low_complexity 3 65 0 811 185 42 12 chr18 26542875 26543175 -60134373 + MER93b LTR ERV1 6 373 0 215 361 14 0 chr18 26544006 26544078 -60133470 + MIR SINE MIR 42 114 -94 416 296 107 12 chr18 26544215 26544384 -60133164 - MIR3 SINE MIR -9 199 15 420 259 52 7 chr18 26544602 26544737 -60132811 - MIR SINE MIR 0 262 122 634 272 174 10 chr18 26544795 26545192 -60132356 + LTR33A LTR ERVL 59 520 -3 3980 149 54 7 chr18 26545814 26546554 -60130994 - L1MB7 LINE L1 0 6184 5410 39 38 0 0 chr18 26546579 26546632 -60130916 + AT_rich Low_complexity Low_complexity 1 53 0 204 74 0 0 chr18 26546909 26546936 -60130612 - MIR SINE MIR -229 33 7 457 227 50 0 chr18 26547337 26547456 -60130092 - L2 LINE L2 -2 3311 3187 279 245 147 0 chr18 26547483 26547585 -60129963 + MLT1L LTR MaLR 339 455 -160 194 0 39 0 chr18 26547705 26547731 -60129817 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 247 265 0 0 chr18 26548306 26548355 -60129193 + L2 LINE L2 3204 3252 -61 386 281 67 15 chr18 26549165 26549300 -60128248 + MER69 DNA AcHobo 1 142 -1084 270 253 0 38 chr18 26549800 26549879 -60127669 + (CATATA)n Simple_repeat Simple_repeat 6 81 0 278 336 112 0 chr18 26550725 26550832 -60126716 + L2 LINE L2 3154 3272 0 2200 153 40 19 chr18 26553056 26553481 -60124067 + Tigger2a DNA MER2_type 1 434 0 439 325 152 5 chr18 26553785 26553976 -60123572 - MIR SINE MIR -36 226 8 301 273 0 0 chr18 26554294 26554371 -60123177 + MER116 DNA Mariner 1 77 -3 1758 203 63 0 chr18 26554615 26555010 -60122538 + LTR40c LTR ERVL 34 453 -12 672 270 62 52 chr18 26555589 26556008 -60121540 - L1ME4a LINE L1 -230 5874 5452 324 253 0 22 chr18 26556297 26556388 -60121160 - L1ME4a LINE L1 -1107 5022 4934 260 324 142 90 chr18 26557126 26557536 -60120012 - L2 LINE L2 0 3272 2842 2088 105 29 4 chr18 26558213 26558490 -60119058 + AluSc SINE Alu 1 284 -25 22 35 0 0 chr18 26558719 26558748 -60118800 + AT_rich Low_complexity Low_complexity 1 29 0 2095 111 3 14 chr18 26558748 26559036 -60118512 + AluSx SINE Alu 1 285 -27 267 146 124 56 chr18 26559061 26559150 -60118398 - L1ME4a LINE L1 -19 6102 6008 309 268 79 57 chr18 26559156 26559384 -60118164 - L1ME4a LINE L1 -199 5922 5690 1711 176 0 24 chr18 26559707 26559997 -60117551 + AluJo SINE Alu 1 283 -29 627 172 81 70 chr18 26561485 26561570 -60115978 - MER53 DNA DNA -1 188 105 1752 98 30 34 chr18 26561570 26561724 -60115824 + L1PA16 LINE L1 5873 6027 -139 2551 101 13 19 chr18 26561724 26562101 -60115447 - THE1C LTR MaLR 0 375 1 1752 98 30 34 chr18 26562101 26562241 -60115307 + L1PA16 LINE L1 6027 6166 0 627 172 81 70 chr18 26562241 26562341 -60115207 - MER53 DNA DNA -84 105 1 320 293 78 63 chr18 26562730 26562921 -60114627 - L1ME4a LINE L1 -1315 4814 4621 24 53 0 0 chr18 26563093 26563131 -60114417 + AT_rich Low_complexity Low_complexity 1 38 0 1554 180 108 38 chr18 26563135 26563607 -60113941 + MLT1D LTR MaLR 1 505 0 2391 92 0 3 chr18 26563614 26563918 -60113630 - AluSg1 SINE Alu -6 303 1 911 304 92 31 chr18 26564040 26565296 -60112252 - L1ME4a LINE L1 -1993 4136 2792 600 179 30 30 chr18 26565296 26565464 -60112084 - L1MB8 LINE L1 -1 6177 6010 911 304 92 31 chr18 26565464 26565545 -60112003 - L1ME4a LINE L1 -3337 2792 2717 651 204 155 0 chr18 26565550 26565731 -60111817 - MER3 DNA MER1_type 0 209 1 393 267 75 46 chr18 26565836 26566076 -60111472 - L1ME4a LINE L1 -5309 810 564 333 315 42 61 chr18 26566561 26566726 -60110822 + MIR SINE MIR 2 163 -99 1077 294 94 0 chr18 26566954 26567335 -60110213 + MER115 DNA AcHobo 272 688 -5 296 277 22 88 chr18 26567876 26568013 -60109535 - MER5A DNA MER1_type -1 188 61 414 257 0 0 chr18 26570871 26571046 -60106502 + (TAGA)n Simple_repeat Simple_repeat 1 175 0 187 298 167 18 chr18 26571046 26571160 -60106388 - L2 LINE L2 -1730 1584 1454 351 0 0 0 chr18 26571170 26571209 -60106339 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 21 36 0 0 chr18 26571469 26571497 -60106051 + AT_rich Low_complexity Low_complexity 1 28 0 202 300 35 65 chr18 26571880 26572080 -60105468 + L2 LINE L2 724 917 -2397 933 230 31 22 chr18 26572804 26573026 -60104522 + MER58A DNA MER1_type 1 224 0 670 288 16 5 chr18 26573169 26573353 -60104195 + MIR SINE MIR 7 192 -70 528 333 6 6 chr18 26574171 26574351 -60103197 + L3 LINE CR1 980 1159 -418 273 282 12 24 chr18 26574445 26574530 -60103018 + L3 LINE CR1 1346 1429 -148 2029 134 3 16 chr18 26574639 26574944 -60102604 + AluJb SINE Alu 1 301 -11 248 283 17 17 chr18 26574953 26575013 -60102535 + MIR SINE MIR 13 72 -190 358 57 0 19 chr18 26575025 26575078 -60102470 - MADE1 DNA Mariner -28 52 1 373 240 19 10 chr18 26575078 26575182 -60102366 + MIR SINE MIR 156 260 -2 210 71 0 0 chr18 26577456 26577484 -60100064 + (CAG)n Simple_repeat Simple_repeat 2 29 0 318 326 68 8 chr18 26577707 26577839 -60099709 - L1MC/D LINE L1 -2327 5481 5342 21 71 0 0 chr18 26577989 26578031 -60099517 + AT_rich Low_complexity Low_complexity 1 42 0 496 247 79 34 chr18 26578456 26578634 -60098914 - L2 LINE L2 -1 3312 3127 183 148 0 0 chr18 26580777 26580804 -60096744 + MIR3 SINE MIR 157 183 -25 1022 244 76 30 chr18 26581135 26581532 -60096016 - MLT1C LTR MaLR -4 463 49 300 269 120 9 chr18 26581605 26581713 -60095835 - L2 LINE L2 0 3313 3194 570 275 39 19 chr18 26583542 26583749 -60093799 + MER102a DNA MER1_type 92 302 -28 571 204 30 0 chr18 26584576 26584708 -60092840 + L1ME3A LINE L1 6034 6169 -1 1222 160 10 10 chr18 26584787 26584987 -60092561 - L1PA16 LINE L1 0 6166 5967 237 344 54 0 chr18 26584987 26585080 -60092468 + L2 LINE L2 3174 3271 -1 2036 248 64 29 chr18 26585836 26586428 -60091120 + MLT1E2 LTR MaLR 14 626 0 496 266 54 35 chr18 26586475 26586678 -60090870 + MIR SINE MIR 46 252 -10 2321 101 3 0 chr18 26586731 26587038 -60090510 + AluSq SINE Alu 1 308 -5 1439 304 165 23 chr18 26587291 26588367 -60089181 + L2 LINE L2 1546 2774 -540 44026 48 1 3 chr18 26588372 26590217 -60087331 + L1PA5 LINE L1 1 1849 -4305 2272 103 3 0 chr18 26590217 26590519 -60087029 - AluY SINE Alu -8 303 1 44026 48 1 3 chr18 26590519 26594837 -60082711 + L1PA5 LINE L1 1849 6149 -5 207 363 44 18 chr18 26595087 26595200 -60082348 + L2 LINE L2 3180 3295 -18 353 290 136 42 chr18 26595235 26595449 -60082099 - L2 LINE L2 -208 3105 2872 1154 253 147 37 chr18 26595662 26596117 -60081431 + MLT1E1 LTR MaLR 138 642 -12 660 246 124 16 chr18 26596443 26596802 -60080746 + MLT1H1 LTR MaLR 91 555 0 1631 150 56 46 chr18 26597543 26597849 -60079699 - AluJo SINE Alu -3 309 1 223 281 149 18 chr18 26598133 26598247 -60079301 + MIR3 SINE MIR 8 136 -72 443 220 10 10 chr18 26600573 26600673 -60076875 - LTR67 LTR ERVL 0 557 458 2017 118 30 7 chr18 26600696 26601000 -60076548 + AluSx SINE Alu 2 312 0 507 279 124 10 chr18 26601213 26601414 -60076134 - MLT1L LTR MaLR -182 433 210 1862 228 83 39 chr18 26602318 26602590 -60074958 + L1MEc LINE L1 20 279 -6117 2551 136 3 0 chr18 26602590 26602965 -60074583 - L1PB1 LINE L1 -8 6143 5768 1862 228 83 39 chr18 26602965 26603714 -60073834 + L1MEc LINE L1 279 993 -5403 351 0 0 0 chr18 26603714 26603753 -60073795 + (CA)n Simple_repeat Simple_repeat 2 40 0 1862 228 83 39 chr18 26603753 26604022 -60073526 + L1MEc LINE L1 993 1249 -5147 1939 148 7 3 chr18 26604022 26604312 -60073236 + AluSx SINE Alu 1 291 -21 1862 228 83 39 chr18 26604312 26604960 -60072588 + L1MEc LINE L1 1249 2148 -4248 306 310 10 30 chr18 26605332 26605432 -60072116 + L2 LINE L2 3157 3254 -18 195 186 0 0 chr18 26605432 26605475 -60072073 + GA-rich Low_complexity Low_complexity 2 44 0 459 235 150 20 chr18 26607105 26607258 -60070290 + L3 LINE CR1 1306 1478 -99 235 276 77 45 chr18 26607997 26608153 -60069395 + L2 LINE L2 2538 2698 -616 451 236 0 93 chr18 26608174 26608314 -60069234 + L2 LINE L2 3174 3300 -13 192 40 0 0 chr18 26608655 26608680 -60068868 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 316 315 163 14 chr18 26608904 26609123 -60068425 + MIR SINE MIR 6 262 0 983 255 128 41 chr18 26609239 26609746 -60067802 - MLT1E1 LTR MaLR -40 553 1 2160 108 3 0 chr18 26612107 26612402 -60065146 - AluSx SINE Alu -16 296 1 812 189 189 20 chr18 26613270 26613514 -60064034 - MER33 DNA MER1_type 0 324 40 509 323 26 21 chr18 26613626 26613818 -60063730 + MIR SINE MIR 53 245 -17 2134 67 102 3 chr18 26613822 26614105 -60063443 + AluY SINE Alu 1 311 0 293 345 8 34 chr18 26615319 26615438 -60062110 + MIR3 SINE MIR 66 181 -27 187 244 0 0 chr18 26615772 26615813 -60061735 + L2 LINE L2 3271 3311 -2 369 240 19 0 chr18 26615873 26615977 -60061571 + L1PA10 LINE L1 4 109 -5766 4000 208 30 58 chr18 26616010 26617378 -60060170 + L1PA10 LINE L1 714 2029 -4432 18067 127 14 8 chr18 26617378 26620914 -60056634 + L1PA10 LINE L1 2945 6472 -11 21 0 0 0 chr18 26620917 26620938 -60056610 + AT_rich Low_complexity Low_complexity 1 21 0 250 152 0 22 chr18 26620998 26621044 -60056504 - L1MA9 LINE L1 0 6312 6268 29 47 0 0 chr18 26621049 26621092 -60056456 + AT_rich Low_complexity Low_complexity 1 43 0 436 373 121 8 chr18 26621613 26621986 -60055562 + L3 LINE CR1 72 486 -1091 15820 165 33 21 chr18 26622048 26622245 -60055303 + L1MA8 LINE L1 3405 3598 -4112 207 0 0 0 chr18 26622245 26622268 -60055280 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 15820 165 33 21 chr18 26622268 26622910 -60054638 + L1MA8 LINE L1 3598 4230 -3480 2404 100 0 0 chr18 26622910 26623219 -60054329 - AluY SINE Alu -2 309 1 15820 165 33 21 chr18 26623219 26623630 -60053918 + L1MA8 LINE L1 4230 4634 -3076 2444 96 0 6 chr18 26623630 26623944 -60053604 + AluSx SINE Alu 1 312 0 15820 165 33 21 chr18 26623944 26624149 -60053399 + L1MA8 LINE L1 4634 4835 -2875 2676 141 34 10 chr18 26624149 26624567 -60052981 + MSTA LTR MaLR 1 428 0 15820 165 33 21 chr18 26624567 26625496 -60052052 + L1MA8 LINE L1 4835 5751 -1959 203 0 0 36 chr18 26625496 26625524 -60052024 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 15820 165 33 21 chr18 26625524 26627306 -60050242 + L1MA8 LINE L1 5751 7636 -74 440 255 0 0 chr18 26627396 26627490 -60050058 + L3 LINE CR1 631 724 -853 1098 297 82 3 chr18 26627499 26627863 -60049685 - MLT1K LTR MaLR 0 588 196 1155 326 102 18 chr18 26627999 26628628 -60048920 + L3 LINE CR1 775 1456 -121 236 240 0 0 chr18 26632018 26632068 -60045480 - L2 LINE L2 0 3313 3264 404 276 66 83 chr18 26632134 26632369 -60045179 + MIR SINE MIR 34 262 0 2005 211 34 91 chr18 26632970 26633965 -60043583 - L1MEc LINE L1 -4240 2156 1202 1641 158 55 0 chr18 26634019 26634349 -60043199 - L1MA8 LINE L1 -25 6266 5919 1019 275 45 11 chr18 26634365 26634896 -60042652 - L1MEc LINE L1 -5215 1181 633 674 323 14 45 chr18 26634990 26635317 -60042231 - L1MEc LINE L1 -5953 443 130 2217 108 0 7 chr18 26635317 26635613 -60041935 + AluSg SINE Alu 1 294 -16 674 323 14 45 chr18 26635613 26635703 -60041845 - L1MEc LINE L1 -6266 130 39 794 275 88 125 chr18 26635829 26636499 -60041049 + L3 LINE CR1 540 1174 -403 1618 177 20 20 chr18 26636499 26636799 -60040749 + AluSx SINE Alu 1 300 -12 794 275 88 125 chr18 26636799 26636978 -60040570 + L3 LINE CR1 1174 1358 -219 2142 112 20 0 chr18 26637520 26637815 -60039733 - AluSg SINE Alu -9 301 1 2264 108 0 0 chr18 26637866 26638163 -60039385 + AluY SINE Alu 1 297 -14 242 241 25 25 chr18 26638183 26638262 -60039286 + L1MC5 LINE L1 7835 7913 -48 228 309 110 37 chr18 26639004 26639140 -60038408 + L2 LINE L2 3111 3256 -16 195 42 0 0 chr18 26639147 26639171 -60038377 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 25 0 0 0 chr18 26639287 26639312 -60038236 + AT_rich Low_complexity Low_complexity 1 25 0 252 310 53 26 chr18 26639371 26639484 -60038064 + MIR SINE MIR 32 147 -61 2388 99 0 0 chr18 26640051 26640355 -60037193 - AluSc SINE Alu -5 304 1 705 246 28 96 chr18 26640419 26640806 -60036742 + MLT1J LTR MaLR 100 460 -51 247 296 193 30 chr18 26641207 26641342 -60036206 + L2 LINE L2 3116 3272 0 2092 162 10 47 chr18 26643069 26643358 -60034190 - MLT1B LTR MaLR -4 386 115 2170 81 60 0 chr18 26643358 26643641 -60033907 - AluSp SINE Alu -13 300 1 2092 162 10 47 chr18 26643641 26643752 -60033796 - MLT1B LTR MaLR -275 115 1 396 228 7 117 chr18 26643796 26643941 -60033607 - MIR SINE MIR -62 146 18 574 260 17 17 chr18 26644323 26644504 -60033044 + Charlie7 DNA MER1_type 295 475 -2137 1213 94 12 6 chr18 26644504 26644674 -60032874 + AluSq SINE Alu 1 171 -142 1068 278 31 14 chr18 26644674 26645099 -60032449 - L1MEc LINE L1 -3086 3129 2698 478 264 96 12 chr18 26645136 26645554 -60031994 - L1MEc LINE L1 -3627 2588 2156 720 321 53 60 chr18 26645559 26645641 -60031907 - L1MEc LINE L1 -5146 1250 1169 1837 178 3 3 chr18 26645641 26645944 -60031604 - AluJb SINE Alu -9 303 1 720 321 53 60 chr18 26645944 26646331 -60031217 - L1MEc LINE L1 -5227 1169 784 36 62 0 0 chr18 26646441 26646505 -60031043 + AT_rich Low_complexity Low_complexity 1 64 0 17643 112 6 11 chr18 26646531 26650139 -60027409 + L1PA8 LINE L1 2545 6133 -39 23 0 0 0 chr18 26650139 26650162 -60027386 + AT_rich Low_complexity Low_complexity 1 23 0 46 78 0 0 chr18 26650734 26650836 -60026712 + AT_rich Low_complexity Low_complexity 1 102 0 255 286 52 50 chr18 26650836 26651043 -60026505 - MIR SINE MIR 0 262 1 1414 171 21 99 chr18 26651471 26651804 -60025744 - AluYb8 SINE Alu -11 307 1 2070 168 16 8 chr18 26654269 26654656 -60022892 - MLT1B LTR MaLR 0 390 1 501 255 14 21 chr18 26654908 26655049 -60022499 + MLT1I LTR MaLR 100 239 -170 253 201 47 38 chr18 26655038 26655144 -60022404 + MLT1I LTR MaLR 318 409 0 * 1770 92 8 0 chr18 26655419 26655669 -60021879 - L1PB1 LINE L1 0 6151 5900 303 318 36 0 chr18 26655894 26656004 -60021544 - MIR SINE MIR -25 237 124 316 304 81 63 chr18 26656855 26657187 -60020361 + L1ME3A LINE L1 760 1097 -5108 486 347 85 20 chr18 26657219 26657636 -60019912 + L1ME3A LINE L1 1131 1743 -833 642 233 204 4 chr18 26657691 26657970 -60019578 + MLT1I LTR MaLR 50 384 -25 2165 115 3 0 chr18 26658190 26658478 -60019070 + AluSx SINE Alu 1 289 -23 430 294 94 44 chr18 26658566 26658875 -60018673 + L1ME3A LINE L1 2103 2391 -3824 2261 127 37 5 chr18 26658875 26659253 -60018295 + MLT1B LTR MaLR 1 390 0 430 294 94 44 chr18 26659253 26659376 -60018172 + L1ME3A LINE L1 2391 2506 -3709 1046 309 110 42 chr18 26659378 26660627 -60016921 + L2 LINE L2 1823 3302 -11 579 287 185 19 chr18 26661099 26661521 -60016027 + L1ME3A LINE L1 2853 3344 -2871 741 282 82 38 chr18 26661895 26662630 -60014918 + L1ME3A LINE L1 5196 5953 -286 461 62 15 0 chr18 26662857 26662922 -60014626 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 7667 22 0 1 chr18 26662955 26663963 -60013585 + L1PA4 LINE L1 5146 6153 -2 239 311 45 63 chr18 26665071 26665293 -60012255 + L2 LINE L2 2836 3053 -219 191 216 0 0 chr18 26665391 26665428 -60012120 + L2 LINE L2 3215 3251 -21 22 0 0 0 chr18 26665949 26665971 -60011577 + AT_rich Low_complexity Low_complexity 1 22 0 730 284 62 47 chr18 26668515 26668938 -60008610 - L1MC4a LINE L1 -1786 6022 5594 641 263 11 0 chr18 26668951 26669126 -60008422 - L1MC4a LINE L1 -2177 5631 5455 234 191 64 0 chr18 26669366 26669413 -60008135 - L2 LINE L2 -4 3268 3219 638 220 12 35 chr18 26669943 26670116 -60007432 - MIR SINE MIR 0 262 94 793 181 0 8 chr18 26672683 26672810 -60004738 + FLAM_A SINE Alu 1 126 -7 22 56 0 0 chr18 26672890 26672926 -60004622 + AT_rich Low_complexity Low_complexity 1 36 0 463 346 57 49 chr18 26672970 26673240 -60004308 - L2 LINE L2 -10 3262 2987 1693 188 7 23 chr18 26673240 26673543 -60004005 + AluJb SINE Alu 4 301 -11 463 346 57 49 chr18 26673543 26673642 -60003906 - L2 LINE L2 -285 2987 2890 212 344 82 33 chr18 26673732 26674002 -60003546 - L2 LINE L2 -558 2756 2474 465 296 44 60 chr18 26674197 26674447 -60003101 - L2 LINE L2 -878 2436 2191 2152 93 0 55 chr18 26674506 26674816 -60002732 - AluSx SINE Alu -19 293 1 342 312 96 0 chr18 26675084 26675209 -60002339 - L2 LINE L2 -219 3053 2917 199 151 0 38 chr18 26677398 26677451 -60000097 + (TG)n Simple_repeat Simple_repeat 1 51 0 1828 204 111 29 chr18 26677660 26678206 -59999342 + MLT1E LTR MaLR 7 593 0 1756 161 11 3 chr18 26678245 26678531 -59999017 - AluJo SINE Alu -2 310 23 238 285 205 20 chr18 26678838 26678989 -59998559 + MIR SINE MIR 23 201 -61 252 86 0 0 chr18 26679253 26679288 -59998260 + (T)n Simple_repeat Simple_repeat 1 35 0 252 0 0 0 chr18 26679315 26679343 -59998205 + (G)n Simple_repeat Simple_repeat 1 28 0 252 214 0 0 chr18 26680215 26680271 -59997277 + (TG)n Simple_repeat Simple_repeat 1 56 0 317 273 214 41 chr18 26680993 26681213 -59996335 + MIR SINE MIR 5 262 0 188 258 129 0 chr18 26682369 26682431 -59995117 - L2 LINE L2 -10 3303 3234 1841 199 89 21 chr18 26682524 26682961 -59994587 + MLT1C LTR MaLR 1 467 0 305 225 199 58 chr18 26683040 26683316 -59994232 + L2 LINE L2 2998 3312 -1 374 327 9 49 chr18 26684211 26684434 -59993114 - L2 LINE L2 -813 2501 2288 227 196 0 0 chr18 26684623 26684669 -59992879 + (CA)n Simple_repeat Simple_repeat 1 46 0 791 277 27 51 chr18 26685546 26685659 -59991889 + L2 LINE L2 3025 3139 -174 2310 206 115 40 chr18 26685659 26686240 -59991308 + MLT1E2 LTR MaLR 2 626 0 791 277 27 51 chr18 26686240 26686422 -59991126 + L2 LINE L2 3139 3313 0 473 290 71 41 chr18 26686450 26686986 -59990562 - L1MC4a LINE L1 -427 5694 5339 729 299 10 0 chr18 26687007 26687208 -59990340 + MIR SINE MIR 56 258 -4 379 288 136 46 chr18 26687210 26687859 -59989689 - L1MC4a LINE L1 -815 5331 4625 370 330 42 8 chr18 26687983 26688222 -59989326 - L1MC4a LINE L1 -1772 4374 4128 247 341 79 0 chr18 26689404 26689530 -59988018 + L2 LINE L2 3126 3261 -11 233 319 11 32 chr18 26690349 26690443 -59987105 - MIR3 SINE MIR -6 202 111 21 0 0 0 chr18 26690666 26690687 -59986861 + AT_rich Low_complexity Low_complexity 1 21 0 913 65 0 0 chr18 26690687 26690794 -59986754 - AluSq/x SINE Alu -206 107 1 2107 130 16 16 chr18 26691609 26691925 -59985623 + 7SLRNA srpRNA srpRNA 1 316 -4 229 267 133 0 chr18 26692734 26692824 -59984724 + MIR SINE MIR 41 142 -66 22 56 0 0 chr18 26692974 26693010 -59984538 + AT_rich Low_complexity Low_complexity 1 36 0 2343 82 3 7 chr18 26693102 26693425 -59984123 + AluSp SINE Alu 1 313 0 289 314 44 7 chr18 26695463 26695600 -59981948 + MIR SINE MIR 75 216 -46 208 238 0 0 chr18 26697099 26697141 -59980407 + (TG)n Simple_repeat Simple_repeat 1 42 0 329 329 88 47 chr18 26698574 26698981 -59978567 - L2 LINE L2 -341 2973 2550 229 254 11 119 chr18 26699036 26699221 -59978327 + L2 LINE L2 2886 3050 -222 267 350 30 0 chr18 26700146 26700246 -59977302 + MIR3 SINE MIR 58 160 -48 233 292 106 0 chr18 26700294 26700407 -59977141 - L2 LINE L2 -3 3310 3186 313 326 210 6 chr18 26700484 26700665 -59976883 - L3 LINE CR1 -19 1558 1341 427 242 24 79 chr18 26700697 26700862 -59976686 - L2 LINE L2 0 3313 3158 2114 151 37 3 chr18 26701025 26701376 -59976172 - L1PA16 LINE L1 -35 6131 5769 1796 72 5 0 chr18 26701378 26701599 -59975949 - L1PA8 LINE L1 -3 6169 5948 212 231 128 13 chr18 26701607 26701685 -59975863 - L3 LINE CR1 -288 1289 1203 418 348 27 22 chr18 26701739 26701963 -59975585 - L3 LINE CR1 -1160 417 193 2343 109 0 0 chr18 26702335 26702637 -59974911 - AluSx SINE Alu -10 302 1 2243 103 0 31 chr18 26702777 26703096 -59974452 + AluSc SINE Alu 1 309 0 38 0 0 0 chr18 26703223 26703261 -59974287 + AT_rich Low_complexity Low_complexity 1 38 0 394 188 119 63 chr18 26703422 26703617 -59973931 + MLT1H1 LTR MaLR 303 555 0 570 259 153 83 chr18 26703767 26704262 -59973286 + MLT1F LTR MaLR 4 533 -9 719 224 7 7 chr18 26704885 26705037 -59972511 + MIR SINE MIR 29 180 -82 1837 162 18 80 chr18 26705079 26705236 -59972312 + MLT1A1 LTR MaLR 1 166 -199 2674 123 20 0 chr18 26705236 26705636 -59971912 + L1MA5 LINE L1 5889 6296 -4 1837 162 18 80 chr18 26705636 26705867 -59971681 + MLT1A1 LTR MaLR 166 365 0 353 211 148 120 chr18 26707048 26707190 -59970358 - MIR SINE MIR -71 191 46 2957 167 9 67 chr18 26707368 26708021 -59969527 + L1MD3 LINE L1 6618 7277 -718 688 184 37 2 chr18 26708022 26708162 -59969386 + MLT1F1 LTR MaLR 1 143 -445 1763 159 4 4 chr18 26708166 26708442 -59969106 + AluJb SINE Alu 1 276 -36 414 0 0 0 chr18 26708445 26708491 -59969057 + (TC)n Simple_repeat Simple_repeat 1 46 0 270 0 0 0 chr18 26708490 26708520 -59969028 + (CA)n Simple_repeat Simple_repeat 1 30 0 * 2013 218 18 0 chr18 26708526 26708926 -59968622 + L1MD3 LINE L1 7416 7822 -173 1499 121 30 118 chr18 26708937 26709268 -59968280 + AluYb8 SINE Alu 1 302 -16 280 94 38 0 chr18 26709788 26709841 -59967707 + (TGAA)n Simple_repeat Simple_repeat 1 55 0 1579 208 11 0 chr18 26710161 26710470 -59967078 + AluJo SINE Alu 1 312 0 650 209 89 21 chr18 26712297 26712417 -59965131 + MIR SINE MIR 33 172 -90 2145 123 102 0 chr18 26712417 26712742 -59964806 + MER46B DNA MER2_type 4 236 0 650 209 89 21 chr18 26712742 26712812 -59964736 + MIR SINE MIR 172 236 -26 345 339 87 5 chr18 26716144 26716362 -59961186 - L3b LINE CR1 -199 1384 1149 205 220 11 99 chr18 26716388 26716479 -59961069 - MIR SINE MIR -26 236 154 207 250 19 0 chr18 26716480 26716532 -59961016 - L2 LINE L2 -14 3299 3247 1783 329 74 31 chr18 26716545 26717330 -59960218 - L3 LINE CR1 -751 826 8 28 0 0 0 chr18 26717442 26717470 -59960078 + AT_rich Low_complexity Low_complexity 1 28 0 634 244 40 35 chr18 26717508 26717709 -59959839 + MLT1J2 LTR MaLR 4 205 -245 234 304 0 0 chr18 26717819 26717875 -59959673 + MLT1J2 LTR MaLR 344 399 -51 304 279 23 0 chr18 26717881 26717967 -59959581 - L3 LINE CR1 -192 1385 1298 802 169 0 0 chr18 26718444 26718562 -59958986 - FLAM_C SINE Alu -15 118 1 506 29 15 0 chr18 26718589 26718657 -59958891 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 363 241 70 70 chr18 26718718 26718946 -59958602 - L1MC4a LINE L1 -1882 5926 5699 315 308 112 14 chr18 26718951 26719094 -59958454 - L1MC4a LINE L1 -597 5569 5413 27 49 0 0 chr18 26719144 26719185 -59958363 + AT_rich Low_complexity Low_complexity 1 41 0 40 37 0 0 chr18 26719300 26719354 -59958194 + AT_rich Low_complexity Low_complexity 1 54 0 330 295 36 30 chr18 26719363 26719529 -59958019 - L2 LINE L2 -1 3312 3146 1104 216 21 22 chr18 26720482 26720742 -59956806 + MIR SINE MIR 4 262 0 447 264 196 0 chr18 26721010 26721173 -59956375 + L2 LINE L2 2977 3171 -142 7348 124 39 38 chr18 26721249 26722211 -59955337 + Tigger3b DNA MER2_type 1 966 -2062 1977 115 39 0 chr18 26722211 26722497 -59955051 - AluSq SINE Alu -11 302 6 7348 124 39 38 chr18 26722497 26722763 -59954785 + Tigger3b DNA MER2_type 966 1230 -1 499 270 167 35 chr18 26722777 26723088 -59954460 + L2 LINE L2 2961 3312 -1 214 343 9 0 chr18 26723154 26723259 -59954289 + L2 LINE L2 2948 3053 -219 1505 273 23 49 chr18 26723272 26723784 -59953764 + MLT1J LTR MaLR 13 511 0 605 260 157 18 chr18 26723878 26724101 -59953447 - MIR SINE MIR 0 262 9 258 261 87 26 chr18 26724107 26724222 -59953326 + L2 LINE L2 3132 3253 -19 273 119 0 0 chr18 26724224 26724266 -59953282 + (TGAG)n Simple_repeat Simple_repeat 1 42 0 754 235 217 19 chr18 26724394 26724768 -59952780 - LTR16A1 LTR ERVL 0 457 10 305 102 17 0 chr18 26725065 26725124 -59952424 + (TG)n Simple_repeat Simple_repeat 2 61 0 702 55 0 0 chr18 26725684 26725775 -59951773 + (TC)n Simple_repeat Simple_repeat 1 91 0 417 171 50 10 chr18 26727610 26727710 -59949838 + MIR SINE MIR 70 177 -31 216 211 26 105 chr18 26727803 26727879 -59949669 + L2 LINE L2 3203 3272 0 1911 153 6 25 chr18 26728081 26728395 -59949153 - AluJo SINE Alu 0 312 5 469 292 88 28 chr18 26728683 26728899 -59948649 + MIR SINE MIR 10 238 -24 1334 143 76 0 chr18 26729375 26729585 -59947963 - MER7A DNA MER2_type -122 224 1 3005 110 7 0 chr18 26730765 26731191 -59946357 + L1MA5A LINE L1 5859 6287 -10 2162 274 66 10 chr18 26731233 26732157 -59945391 - L1M4 LINE L1 -2544 3602 2627 840 249 21 5 chr18 26733947 26734136 -59943412 - MER58A DNA MER1_type -6 218 27 271 373 51 17 chr18 26734213 26734449 -59943099 + L2 LINE L2 2578 2821 -493 331 287 102 0 chr18 26734601 26734709 -59942839 - MLT1J2 LTR MaLR -59 391 273 184 356 78 26 chr18 26734938 26735053 -59942495 + L2 LINE L2 2934 3054 -218 662 205 5 117 chr18 26736993 26737064 -59940484 + MER5A DNA MER1_type 3 80 -109 1694 113 4 4 chr18 26737064 26737303 -59940245 + AluSx SINE Alu 61 299 -13 662 205 5 117 chr18 26737303 26737436 -59940112 + MER5A DNA MER1_type 80 184 -5 829 232 6 0 chr18 26737823 26738004 -59939544 + MER58A DNA MER1_type 27 208 -16 2087 135 7 0 chr18 26738243 26738546 -59939002 + AluSx SINE Alu 1 305 -7 199 238 48 16 chr18 26739644 26739707 -59937841 - MIR SINE MIR -90 172 108 1299 156 30 0 chr18 26739800 26739999 -59937549 - AluJo SINE Alu -3 309 105 335 62 0 0 chr18 26739999 26740040 -59937508 - L1PA5 LINE L1 -293 5861 5818 1238 26 20 0 chr18 26740040 26740190 -59937358 + L1PA5 LINE L1 5997 6150 -4 689 205 0 0 chr18 26740212 26740329 -59937219 - AluJo SINE Alu -185 117 1 487 266 47 56 chr18 26740439 26740706 -59936842 + MLT1H LTR MaLR 223 549 0 317 298 117 11 chr18 26740706 26740800 -59936748 - MIR SINE MIR -158 104 1 279 232 30 10 chr18 26741154 26741253 -59936295 + T-rich Low_complexity Low_complexity 3 103 0 2169 116 7 0 chr18 26741841 26742142 -59935406 - AluSx SINE Alu -9 303 1 414 0 0 0 chr18 26742198 26742244 -59935304 + (CA)n Simple_repeat Simple_repeat 2 47 0 216 111 0 0 chr18 26742244 26742280 -59935268 + (TC)n Simple_repeat Simple_repeat 1 36 0 2201 125 0 0 chr18 26743439 26743736 -59933812 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr18 26743736 26743760 -59933788 + AT_rich Low_complexity Low_complexity 1 24 0 770 198 261 8 chr18 26745972 26746078 -59931470 + Tigger7 DNA MER2_type 1 79 -2408 2342 83 0 35 chr18 26746078 26746392 -59931156 + AluY SINE Alu 1 303 -8 770 198 261 8 chr18 26746392 26746523 -59931025 + Tigger7 DNA MER2_type 79 298 -2189 * 1941 151 34 6 chr18 26746520 26746877 -59930671 + Tigger7 DNA MER2_type 2121 2487 0 941 246 114 18 chr18 26747215 26747556 -59929992 - MLT1J2 LTR MaLR 0 450 77 2374 136 43 14 chr18 26748071 26748491 -59929057 + MSTB1 LTR MaLR 1 432 0 219 36 0 0 chr18 26749996 26750024 -59927524 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 22 0 0 0 chr18 26750284 26750306 -59927242 + AT_rich Low_complexity Low_complexity 1 22 0 186 103 0 0 chr18 26750774 26750803 -59926745 + (GA)n Simple_repeat Simple_repeat 2 30 0 2503 112 42 68 chr18 26752424 26752881 -59924667 + L1PA16 LINE L1 5721 6165 -1 832 343 89 25 chr18 26753021 26753125 -59924423 - L2 LINE L2 -19 3253 3157 243 0 0 0 chr18 26753125 26753152 -59924396 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 832 343 89 25 chr18 26753152 26753885 -59923663 - L2 LINE L2 -115 3157 2355 289 267 153 28 chr18 26753897 26754249 -59923299 + L1ME4a LINE L1 5712 6107 -14 1783 180 17 0 chr18 26754293 26754588 -59922960 + AluJo SINE Alu 2 301 -11 233 359 22 22 chr18 26754754 26754846 -59922702 - MIR SINE MIR -97 111 20 247 225 0 113 chr18 26755176 26755256 -59922292 - MER2 DNA MER2_type 0 345 275 920 168 36 0 chr18 26755348 26755515 -59922033 - MER2 DNA MER2_type -172 173 1 253 272 97 18 chr18 26755633 26755747 -59921801 - MIR SINE MIR -6 256 134 * 809 221 9 42 chr18 26755746 26755963 -59921585 - L2 LINE L2 0 3313 3104 227 260 39 42 chr18 26756007 26756104 -59921444 - MIR SINE MIR -114 94 2 21707 122 27 10 chr18 26756654 26760156 -59917392 + L1MA3 LINE L1 14 3575 -3990 13197 172 43 7 chr18 26760147 26761287 -59916261 + L1MA3 LINE L1 3897 4995 -2570 * 2300 92 17 0 chr18 26761287 26761582 -59915966 - AluSp SINE Alu -13 300 1 13197 172 43 7 chr18 26761582 26763241 -59914307 + L1MA3 LINE L1 4995 6796 -769 3428 93 4 35 chr18 26763243 26763789 -59913759 + L1MA3 LINE L1 7196 7724 0 2029 147 0 0 chr18 26763989 26764282 -59913266 - AluSx SINE Alu -19 293 1 25 65 0 0 chr18 26766818 26766864 -59910684 + AT_rich Low_complexity Low_complexity 1 46 0 2227 117 0 0 chr18 26766944 26767252 -59910296 - AluSq SINE Alu -5 308 1 240 379 85 29 chr18 26767343 26767615 -59909933 + L2 LINE L2 2809 3095 -177 349 217 130 0 chr18 26767715 26767807 -59909741 - MIR SINE MIR -49 213 110 1298 155 15 53 chr18 26768269 26768534 -59909014 - AluJb SINE Alu -9 303 49 681 310 48 9 chr18 26770135 26770470 -59907078 - L1MC4a LINE L1 -1901 5907 5560 202 170 64 0 chr18 26770506 26770553 -59906995 - MIR3 SINE MIR -9 199 150 22 70 0 0 chr18 26770583 26770626 -59906922 + AT_rich Low_complexity Low_complexity 1 43 0 1705 70 18 0 chr18 26770705 26770933 -59906615 - L1PA7 LINE L1 -2 6152 5921 1078 195 124 9 chr18 26771399 26771738 -59905810 - MLT1G LTR MaLR 0 530 156 352 279 137 98 chr18 26771743 26771910 -59905638 + L1ME LINE L1 12 171 -6776 2147 142 0 0 chr18 26771910 26772220 -59905328 + AluSx SINE Alu 1 310 -2 352 279 137 98 chr18 26772220 26772482 -59905066 + L1ME LINE L1 171 1334 -5613 182 286 0 0 chr18 26772731 26772787 -59904761 - MIR SINE MIR -29 233 178 389 79 0 32 chr18 26772793 26772856 -59904692 + MADE1 DNA Mariner 1 61 -19 228 150 50 0 chr18 26773057 26773117 -59904431 + (TA)n Simple_repeat Simple_repeat 2 64 0 1432 240 115 23 chr18 26773318 26773837 -59903711 + MLT1E2 LTR MaLR 1 552 -74 1072 180 0 0 chr18 26773838 26774005 -59903543 + AluSg/x SINE Alu 133 299 -13 230 163 0 41 chr18 26774064 26774113 -59903435 + MLT1A2 LTR MaLR 1 47 -327 2478 82 0 16 chr18 26774346 26774661 -59902887 - AluSg SINE Alu 0 310 1 664 208 18 151 chr18 26774739 26774986 -59902562 + MLT1A2 LTR MaLR 173 505 0 197 179 26 0 chr18 26774996 26775035 -59902513 - MIR SINE MIR -104 158 119 4226 195 18 16 chr18 26775051 26775518 -59902030 + L1MB2 LINE L1 4858 5323 -848 2317 114 0 0 chr18 26775518 26775824 -59901724 + AluSq SINE Alu 1 306 -7 4226 195 18 16 chr18 26775824 26776658 -59900890 + L1MB2 LINE L1 5323 6163 -8 214 224 59 0 chr18 26777203 26777288 -59900260 + (TA)n Simple_repeat Simple_repeat 2 91 0 747 197 0 0 chr18 26777296 26777428 -59900120 - MER7A DNA MER2_type 0 336 205 1077 122 83 0 chr18 26777679 26777860 -59899688 - MER7A DNA MER2_type -152 194 1 807 202 42 6 chr18 26777870 26778038 -59899510 - MSTD LTR MaLR 0 396 223 385 250 9 9 chr18 26778047 26778155 -59899393 - MSTD LTR MaLR -288 108 1 9577 215 47 39 chr18 26778204 26779085 -59898463 - L1MB7 LINE L1 -9 6986 6113 1628 171 3 29 chr18 26779085 26779394 -59898154 - AluJo SINE Alu -11 301 1 9577 215 47 39 chr18 26779394 26780953 -59896595 - L1MB7 LINE L1 -882 6113 4568 2295 57 0 4 chr18 26780953 26781271 -59896277 - AluY SINE Alu 0 317 1 9577 215 47 39 chr18 26781271 26783335 -59894213 - L1MB7 LINE L1 -2427 4568 2479 1158 149 0 0 chr18 26783353 26783514 -59894034 + FRAM SINE Alu 1 158 -18 3084 228 55 22 chr18 26783712 26784641 -59892907 - L1MB7 LINE L1 -5665 1194 166 991 124 248 19 chr18 26784641 26784870 -59892678 - AluSg1 SINE Alu 0 309 35 590 161 60 89 chr18 26784872 26784983 -59892565 - L1MB7 LINE L1 -6686 173 67 2314 89 3 0 chr18 26784983 26785276 -59892272 + AluSp SINE Alu 1 294 -19 590 161 60 89 chr18 26785276 26785332 -59892216 - L1MB7 LINE L1 -6792 67 11 348 303 164 0 chr18 26785412 26785534 -59892014 + MER91A DNA MER1_type 25 166 -30 230 228 53 0 chr18 26785534 26785591 -59891957 + MER91A DNA MER1_type 135 194 -2 947 214 6 6 chr18 26785648 26785826 -59891722 + MER5B DNA MER1_type 1 178 0 267 243 77 26 chr18 26786612 26786761 -59890787 - MER117 DNA MER1_type -1 196 1 282 270 186 13 chr18 26786799 26786947 -59890601 + MIR SINE MIR 31 191 -34 1324 188 138 109 chr18 26786990 26787539 -59890009 - MER34B LTR ERV1 0 565 1 384 59 0 0 chr18 26787554 26787605 -59889943 + (CA)n Simple_repeat Simple_repeat 1 51 0 2749 92 19 8 chr18 26787758 26788128 -59889420 - THE1C LTR MaLR -1 374 1 2344 167 77 7 chr18 26789216 26789647 -59887901 + LOR1b LTR ERV1 1 461 0 21 36 0 0 chr18 26790037 26790065 -59887483 + AT_rich Low_complexity Low_complexity 1 28 0 398 292 199 9 chr18 26790156 26790382 -59887166 + L2 LINE L2 2245 2513 -801 477 283 79 0 chr18 26790447 26790599 -59886949 + MER103 DNA DNA 3 166 0 2116 122 0 0 chr18 26791242 26791537 -59886011 - AluSx SINE Alu -17 295 1 278 105 0 0 chr18 26791633 26791671 -59885877 - tRNA-Ile-ATT tRNA tRNA -39 38 1 473 346 63 37 chr18 26791708 26792139 -59885409 + L1M4 LINE L1 4861 5302 -844 727 171 47 16 chr18 26792245 26792374 -59885174 - FLAM_A SINE Alu 0 133 1 234 226 19 0 chr18 26792823 26792876 -59884672 + GA-rich Low_complexity Low_complexity 4 57 0 338 266 86 7 chr18 26793030 26793169 -59884379 - MLT1L LTR MaLR 0 615 466 203 275 29 29 chr18 26793398 26793467 -59884081 + L2 LINE L2 3197 3265 -7 371 322 0 0 chr18 26794991 26795106 -59882442 + MER34 LTR ERV1 1 115 -427 1857 136 65 7 chr18 26795141 26795435 -59882113 + AluSx SINE Alu 1 311 -1 1710 148 41 10 chr18 26798544 26798835 -59878713 - AluJo SINE Alu -12 300 1 321 254 0 0 chr18 26798835 26798902 -59878646 + Tigger7 DNA MER2_type 14 80 -653 * 421 105 0 0 chr18 26798899 26798956 -59878592 - Tigger7 DNA MER2_type -2140 347 291 * 1527 111 74 16 chr18 26798953 26799127 -59878421 + Tigger7 DNA MER2_type 2234 2427 -64 1297 153 63 5 chr18 26799127 26799349 -59878199 + MER46A DNA MER2_type 2 236 0 1527 111 74 16 chr18 26799349 26799417 -59878131 + Tigger7 DNA MER2_type 2427 2490 -1 2215 96 3 7 chr18 26799687 26800019 -59877529 + AluSq SINE Alu 1 313 0 264 311 24 61 chr18 26800353 26800517 -59877031 - L2 LINE L2 -419 2895 2738 349 307 95 36 chr18 26800587 26800861 -59876687 - L2 LINE L2 -1242 2072 1783 1970 117 55 7 chr18 26801079 26801369 -59876179 + AluSx SINE Alu 1 304 -8 226 186 58 23 chr18 26803081 26803167 -59874381 + L1MCa LINE L1 1996 2084 -4342 1424 245 74 39 chr18 26803261 26803284 -59874264 - L1ME4a LINE L1 -49 6072 6051 1846 157 0 3 chr18 26803284 26803570 -59873978 - AluSx SINE Alu -27 285 1 1424 245 74 39 chr18 26803570 26804130 -59873418 - L1ME4a LINE L1 -70 6051 5469 7118 110 6 20 chr18 26806043 26806743 -59870805 - L1MA4A LINE L1 -6 6297 5617 2234 113 3 0 chr18 26806743 26807044 -59870504 - AluSq SINE Alu -11 302 1 7118 110 6 20 chr18 26807044 26807498 -59870050 - L1MA4A LINE L1 -686 5617 5158 189 0 0 0 chr18 26807514 26807535 -59870013 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 1905 151 0 0 chr18 26807535 26807813 -59869735 - AluSx SINE Alu -32 280 3 490 282 74 40 chr18 26807968 26808470 -59869078 + MLT1H LTR MaLR 1 549 0 6914 129 11 40 chr18 26808672 26810615 -59866933 - L1PA11 LINE L1 -4 6170 4255 477 188 67 48 chr18 26810688 26810853 -59866695 + Charlie5 DNA MER1_type 2457 2624 0 1671 212 110 84 chr18 26810989 26811617 -59865931 - LTR48B LTR ERV1 0 644 1 4122 193 70 90 chr18 26811801 26813437 -59864111 - LTR48B-int LTR ERV1 -1359 4972 1956 878 252 19 19 chr18 26813473 26813687 -59863861 - LTR48B-int LTR ERV1 -4210 2121 1908 906 177 0 0 chr18 26813749 26813896 -59863652 - LTR48B-int LTR ERV1 -5343 988 842 2157 220 41 37 chr18 26813911 26814042 -59863506 - LTR48B-int LTR ERV1 -4496 1450 1321 2209 113 0 0 chr18 26814042 26814333 -59863215 + AluSg SINE Alu 1 291 -19 2157 220 41 37 chr18 26814333 26814763 -59862785 - LTR48B-int LTR ERV1 -4625 1321 358 345 290 10 30 chr18 26814775 26814875 -59862673 - LTR48B-int LTR ERV1 -4618 1328 1231 * 1272 234 28 50 chr18 26814853 26815212 -59862336 - LTR48B-int LTR ERV1 -5980 351 1 464 165 88 0 chr18 26815217 26815308 -59862240 - LTR48B LTR ERV1 -3 784 686 1249 150 0 0 chr18 26815331 26815511 -59862037 - AluJb SINE Alu -28 284 105 1044 229 39 36 chr18 26815613 26815918 -59861630 + LTR9 LTR ERV1 307 612 0 576 165 66 0 chr18 26815918 26816009 -59861539 - AluJb SINE Alu -215 97 1 1372 207 73 66 chr18 26816029 26816563 -59860985 - LTR48B LTR ERV1 -91 696 12 1859 164 0 3 chr18 26816823 26817128 -59860420 + AluJb SINE Alu 1 304 -8 2062 138 6 6 chr18 26817336 26817648 -59859900 - AluSx SINE Alu 0 312 1 39 60 0 0 chr18 26818019 26818086 -59859462 + AT_rich Low_complexity Low_complexity 1 67 0 293 191 0 0 chr18 26819048 26819095 -59858453 + polypurine Low_complexity Low_complexity 2 48 0 841 97 34 23 chr18 26819095 26819271 -59858277 + GA-rich Low_complexity Low_complexity 3 180 0 1374 161 0 14 chr18 26819764 26819987 -59857561 + AluJb SINE Alu 86 305 -7 2217 157 3 6 chr18 26820724 26821080 -59856468 + MER47A DNA MER2_type 12 366 0 289 311 78 44 chr18 26821257 26821437 -59856111 + L2 LINE L2 3127 3312 -1 2280 153 40 3 chr18 26821458 26821810 -59855738 - MLT1A1 LTR MaLR 0 365 1 317 263 81 16 chr18 26822139 26822373 -59855175 + L1ME LINE L1 5226 5474 -696 226 273 45 81 chr18 26822457 26822514 -59855034 + L1ME LINE L1 5615 5672 -449 2529 61 0 16 chr18 26822514 26822825 -59854723 + AluY SINE Alu 1 306 -5 226 273 45 81 chr18 26822825 26822860 -59854688 + L1ME LINE L1 5672 5707 -414 2191 158 92 22 chr18 26822860 26823260 -59854288 - MSTA LTR MaLR 0 428 1 226 273 45 81 chr18 26823260 26823364 -59854184 + L1ME LINE L1 5707 5805 -316 202 150 0 25 chr18 26823380 26823420 -59854128 + (TAA)n Simple_repeat Simple_repeat 2 40 0 1081 192 58 72 chr18 26824876 26825152 -59852396 - MLT2D LTR ERVL 0 414 143 2041 112 44 3 chr18 26825317 26825612 -59851936 - AluSx SINE Alu -5 307 1 578 208 0 24 chr18 26825930 26826055 -59851493 - MLT2D LTR ERVL -289 125 4 1159 142 11 0 chr18 26826125 26826301 -59851247 + AluJb SINE Alu 135 312 0 1677 293 75 38 chr18 26826427 26826939 -59850609 + MER115 DNA AcHobo 33 575 -118 3669 165 62 9 chr18 26826939 26827613 -59849935 - MER67C LTR ERV1 0 710 1 1677 293 75 38 chr18 26827613 26827736 -59849812 + MER115 DNA AcHobo 575 692 -1 22 0 0 0 chr18 26827780 26827802 -59849746 + AT_rich Low_complexity Low_complexity 1 22 0 418 326 30 15 chr18 26828150 26828285 -59849263 + MIR3 SINE MIR 34 170 -38 204 158 0 0 chr18 26829090 26829128 -59848420 + T-rich Low_complexity Low_complexity 1 38 0 801 136 45 0 chr18 26829150 26829282 -59848266 - MSTB LTR MaLR -80 346 209 386 293 49 24 chr18 26829293 26829416 -59848132 - MIR SINE MIR -64 144 19 243 0 0 0 chr18 26829951 26829978 -59847570 + (TC)n Simple_repeat Simple_repeat 1 27 0 * 324 70 0 0 chr18 26829977 26830020 -59847528 + (CA)n Simple_repeat Simple_repeat 1 43 0 397 295 68 28 chr18 26830391 26830695 -59846853 - MLT1L LTR MaLR -153 462 116 522 243 148 91 chr18 26830720 26830746 -59846802 - MLT1H LTR MaLR -5 544 521 3597 135 63 42 chr18 26830746 26831367 -59846181 - MER51A LTR ERV1 0 634 1 522 243 148 91 chr18 26831367 26831780 -59845768 - MLT1H LTR MaLR -28 521 80 262 272 0 37 chr18 26831834 26831915 -59845633 - MLT1L LTR MaLR -522 93 16 2040 128 0 0 chr18 26832108 26832412 -59845136 + AluSq SINE Alu 1 304 0 213 309 72 39 chr18 26832423 26832575 -59844973 - MIR3 SINE MIR -23 185 30 641 280 50 0 chr18 26832679 26832879 -59844669 + MLT1J LTR MaLR 1 210 -301 318 317 138 0 chr18 26833481 26833604 -59843944 - L2 LINE L2 0 3272 3133 272 358 66 48 chr18 26835443 26835778 -59841770 + L2 LINE L2 2923 3263 -9 31 26 0 0 chr18 26837910 26837948 -59839600 + AT_rich Low_complexity Low_complexity 1 38 0 303 28 0 0 chr18 26838233 26838269 -59839279 + (TA)n Simple_repeat Simple_repeat 2 37 0 2028 179 57 46 chr18 26838887 26839411 -59838137 + L1MC4 LINE L1 7511 8040 -2 26 50 0 0 chr18 26839417 26839457 -59838091 + AT_rich Low_complexity Low_complexity 1 40 0 1746 178 0 30 chr18 26840639 26840942 -59836606 - AluJo SINE Alu -18 294 1 23 0 0 0 chr18 26841015 26841038 -59836510 + AT_rich Low_complexity Low_complexity 1 23 0 2554 69 0 3 chr18 26841923 26842228 -59835320 + AluY SINE Alu 1 304 -7 1829 175 16 16 chr18 26842289 26842654 -59834894 + MLT1A1 LTR MaLR 1 365 0 1507 204 118 47 chr18 26843665 26843726 -59833822 - MLT1D LTR MaLR -6 499 444 2194 134 13 0 chr18 26843726 26844031 -59833517 + AluSx SINE Alu 1 309 -3 1507 204 118 47 chr18 26844031 26844435 -59833113 - MLT1D LTR MaLR -61 444 1 237 197 82 16 chr18 26844440 26844501 -59833047 - MIR SINE MIR -63 145 81 1334 7 0 0 chr18 26844502 26844647 -59832901 + AluY SINE Alu 155 299 -12 270 265 11 108 chr18 26844854 26845039 -59832509 - L1ME LINE L1 -299 5822 5656 2167 101 0 4 chr18 26845075 26845353 -59832195 - AluSg SINE Alu -33 277 1 228 310 53 0 chr18 26845439 26845552 -59831996 - L1ME LINE L1 -2271 5537 5419 21 0 0 0 chr18 26845725 26845746 -59831802 + AT_rich Low_complexity Low_complexity 1 21 0 4312 78 0 0 chr18 26846004 26846558 -59830990 - MER41A LTR ERV1 0 554 1 450 171 24 81 chr18 26846866 26846989 -59830559 - L1MB1 LINE L1 -43 6125 6010 315 22 0 22 chr18 26846990 26847036 -59830512 + L1MB1 LINE L1 5992 6036 -132 375 260 42 10 chr18 26847160 26847256 -59830292 - MIR SINE MIR -85 123 25 4139 66 14 25 chr18 26847258 26847699 -59829849 + MER41A LTR ERV1 1 437 -117 1917 117 18 0 chr18 26847699 26848003 -59829545 - AluSg SINE Alu 0 309 1 4139 66 14 25 chr18 26848003 26848120 -59829428 + MER41A LTR ERV1 437 554 0 4213 67 7 26 chr18 26848124 26848156 -59829392 + MER41A LTR ERV1 1 32 -522 2302 108 3 0 chr18 26848156 26848463 -59829085 - AluY SINE Alu -3 308 1 4213 67 7 26 chr18 26848463 26848995 -59828553 + MER41A LTR ERV1 32 554 0 189 0 0 0 chr18 26849326 26849347 -59828201 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1996 132 0 4 chr18 26849349 26849629 -59827919 - AluSx SINE Alu -33 279 1 347 125 18 0 chr18 26849635 26849691 -59827857 - MER5A DNA MER1_type -120 69 13 209 263 0 0 chr18 26850359 26850416 -59827132 + T-rich Low_complexity Low_complexity 3 59 0 1990 104 0 11 chr18 26850551 26850820 -59826728 + AluSx SINE Alu 31 296 -16 2181 109 3 3 chr18 26851053 26851357 -59826191 + AluSg SINE Alu 1 304 -6 234 150 0 0 chr18 26852307 26852347 -59825201 + (A)n Simple_repeat Simple_repeat 1 40 0 519 286 149 6 chr18 26852709 26852870 -59824678 + MER5A DNA MER1_type 4 187 -2 1841 130 0 0 chr18 26853302 26853563 -59823985 - AluSx SINE Alu -7 305 45 521 172 30 20 chr18 26853586 26853685 -59823863 - AluS SINE Alu -212 101 2 2027 93 83 14 chr18 26854032 26854321 -59823227 + AluSc SINE Alu 1 309 0 769 176 81 14 chr18 26857420 26857568 -59819980 - FRAM SINE Alu -8 158 1 2284 96 0 0 chr18 26857602 26857895 -59819653 + AluSc SINE Alu 1 293 -16 228 184 0 0 chr18 26858051 26858100 -59819448 + (CA)n Simple_repeat Simple_repeat 1 49 0 337 215 13 51 chr18 26858227 26858306 -59819242 + L2 LINE L2 3238 3313 0 432 97 0 0 chr18 26858691 26858753 -59818795 + (TTCC)n Simple_repeat Simple_repeat 3 64 0 226 331 142 21 chr18 26858901 26859182 -59818366 + L2 LINE L2 2198 2512 -802 354 241 25 0 chr18 26859239 26859318 -59818230 + MIR SINE MIR 81 161 -101 216 319 101 0 chr18 26859376 26859445 -59818103 - L2 LINE L2 -36 3277 3202 2182 117 0 0 chr18 26859704 26859994 -59817554 + AluSx SINE Alu 1 290 -22 434 261 25 42 chr18 26860024 26860143 -59817405 - L2 LINE L2 -9 3304 3188 260 264 27 36 chr18 26860412 26860522 -59817026 + L2 LINE L2 2837 2945 -327 247 302 23 12 chr18 26860525 26860611 -59816937 - MIR SINE MIR -6 256 170 222 303 0 15 chr18 26861180 26861246 -59816302 - MIR SINE MIR -122 140 76 302 300 50 10 chr18 26861281 26861381 -59816167 + L2 LINE L2 2945 3048 -224 1992 136 10 10 chr18 26861513 26861821 -59815727 + AluSx SINE Alu 1 308 -4 432 0 0 0 chr18 26861828 26861876 -59815672 + (GGAA)n Simple_repeat Simple_repeat 3 50 0 540 111 0 0 chr18 26861917 26861998 -59815550 + (GAAA)n Simple_repeat Simple_repeat 1 81 0 841 106 28 0 chr18 26862045 26862187 -59815361 + GA-rich Low_complexity Low_complexity 3 148 0 194 202 119 36 chr18 26862270 26862354 -59815194 - MIR SINE MIR -74 188 98 2066 129 31 0 chr18 26864135 26864429 -59813119 + AluSg SINE Alu 1 303 -7 1940 151 13 0 chr18 26865909 26866208 -59811340 + AluSx SINE Alu 1 303 -9 1924 157 6 13 chr18 26866832 26867145 -59810403 + AluSx SINE Alu 1 311 -1 668 259 40 84 chr18 26867647 26868055 -59809493 + L1ME4a LINE L1 5507 5879 -242 1761 181 3 3 chr18 26868055 26868348 -59809200 - AluJo SINE Alu -19 293 1 668 259 40 84 chr18 26868348 26868571 -59808977 + L1ME4a LINE L1 5879 6110 -11 1205 90 0 0 chr18 26868657 26868813 -59808735 + AluY SINE Alu 151 306 -5 1991 186 27 2 chr18 26869625 26870028 -59807520 + MER63 DNA MER1_type 624 1036 -25 194 249 123 97 chr18 26870044 26870205 -59807343 - L2 LINE L2 -1036 2278 2123 2260 68 4 0 chr18 26870205 26870485 -59807063 - AluSg SINE Alu -14 296 16 194 249 123 97 chr18 26870485 26870665 -59806883 - L2 LINE L2 -1191 2123 1928 513 325 113 14 chr18 26871326 26871671 -59805877 + L2 LINE L2 1963 2341 -973 2007 214 36 28 chr18 26871708 26872286 -59805262 + L1ME1 LINE L1 5579 6161 -5 769 155 0 0 chr18 26872639 26872755 -59804793 + FLAM_C SINE Alu 1 116 -27 1028 257 98 57 chr18 26873065 26873225 -59804323 - L2 LINE L2 0 3313 3161 189 0 0 0 chr18 26873225 26873246 -59804302 + (TG)n Simple_repeat Simple_repeat 2 22 0 1028 257 98 57 chr18 26873246 26873505 -59804043 - L2 LINE L2 -152 3161 2877 380 254 32 8 chr18 26873678 26873804 -59803744 + L1ME4a LINE L1 5976 6104 -17 22 56 0 0 chr18 26873846 26873882 -59803666 + AT_rich Low_complexity Low_complexity 1 36 0 403 231 208 38 chr18 26874124 26874308 -59803240 + L1ME LINE L1 5257 5474 -690 1502 187 10 7 chr18 26874324 26874613 -59802935 + AluJo SINE Alu 1 290 -22 22 0 0 0 chr18 26874622 26874644 -59802904 + AT_rich Low_complexity Low_complexity 1 22 0 479 250 27 7 chr18 26874688 26874836 -59802712 + L1ME LINE L1 5539 5689 -432 681 215 60 60 chr18 26874910 26875110 -59802438 - MIR SINE MIR -61 201 2 25 51 0 0 chr18 26875235 26875274 -59802274 + AT_rich Low_complexity Low_complexity 1 39 0 288 246 35 114 chr18 26876717 26876831 -59800717 - L2 LINE L2 -12 3301 3197 1757 159 10 17 chr18 26877121 26877410 -59800138 + AluJb SINE Alu 1 287 -25 2512 198 60 16 chr18 26877417 26877968 -59799580 + MLT1A1-int LTR MaLR 1160 1734 -1 1880 162 37 3 chr18 26877969 26878320 -59799228 + MLT1A1 LTR MaLR 1 363 -2 255 233 35 0 chr18 26878498 26878584 -59798964 - L1M4 LINE L1 -3095 3051 2963 315 301 55 20 chr18 26878746 26878892 -59798656 - L1M4 LINE L1 -3342 2804 2654 910 153 157 5 chr18 26878934 26879157 -59798391 + MER33 DNA MER1_type 22 278 -46 2190 101 7 3 chr18 26879158 26879454 -59798094 + AluSx SINE Alu 1 297 -15 1520 139 8 24 chr18 26879965 26880216 -59797332 - AluSx SINE Alu -16 296 50 246 279 100 72 chr18 26880320 26880571 -59796977 - MLT1H LTR MaLR -291 258 1 274 214 86 34 chr18 26880713 26880783 -59796765 - HAL1 LINE L1 -831 1676 1596 575 89 0 0 chr18 26880783 26880862 -59796686 + MADE1 DNA Mariner 2 80 0 274 214 86 34 chr18 26880862 26880908 -59796640 - HAL1 LINE L1 -911 1596 1554 351 0 0 0 chr18 26881126 26881165 -59796383 + (TA)n Simple_repeat Simple_repeat 2 40 0 867 158 54 79 chr18 26881398 26881601 -59795947 - AluJo SINE Alu -21 291 94 22 35 0 0 chr18 26882196 26882225 -59795323 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr18 26883647 26883671 -59793877 + AT_rich Low_complexity Low_complexity 1 24 0 229 163 109 65 chr18 26883990 26884082 -59793466 - MLT1J1 LTR MaLR -56 390 295 355 302 89 17 chr18 26884167 26884346 -59793202 - MLT1J LTR MaLR -249 262 71 2331 91 0 10 chr18 26884358 26884666 -59792882 + AluY SINE Alu 1 305 -6 30 0 0 0 chr18 26884749 26884779 -59792769 + AT_rich Low_complexity Low_complexity 1 30 0 2316 80 7 7 chr18 26884857 26885157 -59792391 - AluSp SINE Alu -13 300 1 235 191 21 106 chr18 26885226 26885320 -59792228 - L1MC4 LINE L1 -1343 6699 6614 1699 150 20 36 chr18 26885653 26885959 -59791589 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr18 26886121 26886144 -59791404 + AT_rich Low_complexity Low_complexity 1 23 0 395 270 100 45 chr18 26886513 26886713 -59790835 + L1ME4a LINE L1 5301 5511 -659 319 316 105 13 chr18 26886913 26887141 -59790407 + L1ME4a LINE L1 5871 6119 -2 2458 80 0 0 chr18 26888443 26888756 -59788792 + AluSq SINE Alu 1 313 0 21 0 0 0 chr18 26890390 26890411 -59787137 + AT_rich Low_complexity Low_complexity 1 21 0 2082 101 73 0 chr18 26891531 26891818 -59785730 + AluSx SINE Alu 1 308 -4 583 279 33 11 chr18 26891883 26892066 -59785482 + L1MC5 LINE L1 7722 7908 -53 256 267 33 25 chr18 26892238 26892358 -59785190 + MIR SINE MIR 92 212 -50 343 188 0 62 chr18 26893018 26893098 -59784450 - MIR SINE MIR -111 151 77 530 333 36 6 chr18 26893168 26893333 -59784215 + MIR SINE MIR 7 176 -86 248 333 78 39 chr18 26893392 26893521 -59784027 + MIR3 SINE MIR 2 135 -73 559 355 141 15 chr18 26893531 26894055 -59783493 - L2 LINE L2 -606 2708 2119 475 253 93 16 chr18 26894213 26894395 -59783153 - L2 LINE L2 -5 3308 3113 2767 265 66 17 chr18 26894415 26895359 -59782189 + L1ME1 LINE L1 73 1062 -5334 1997 224 68 109 chr18 26895361 26896235 -59781313 + L1ME1 LINE L1 1210 2141 -4255 920 165 15 39 chr18 26896235 26896336 -59781212 + L1MB7 LINE L1 5984 6079 -105 1570 167 32 18 chr18 26896336 26896618 -59780930 - AluJo SINE Alu -24 288 3 920 165 15 39 chr18 26896618 26896722 -59780826 + L1MB7 LINE L1 6079 6184 0 1997 224 68 109 chr18 26896722 26897090 -59780458 + L1ME1 LINE L1 2141 2523 -3873 1794 234 133 19 chr18 26897101 26897903 -59779645 + L1ME1 LINE L1 2895 3788 -2427 445 159 0 0 chr18 26897907 26897976 -59779572 - MER47A DNA MER2_type 0 366 298 * 757 209 6 13 chr18 26897972 26898130 -59779418 - MER47A DNA MER2_type -200 166 10 555 154 77 19 chr18 26898140 26898244 -59779304 - AluJo SINE Alu -143 169 60 5586 213 73 38 chr18 26898246 26899372 -59778176 + L1ME1 LINE L1 3792 4878 -1357 2087 86 3 83 chr18 26899372 26899708 -59777840 + AluSc SINE Alu 1 309 0 5586 213 73 38 chr18 26899708 26900931 -59776617 + L1ME1 LINE L1 4878 6227 -8 1432 279 70 44 chr18 26900934 26901659 -59775889 - L2 LINE L2 -183 3130 2381 461 372 52 61 chr18 26902272 26902600 -59774948 + L2 LINE L2 2945 3269 -3 220 263 92 26 chr18 26902994 26903070 -59774478 + L2 LINE L2 3233 3313 0 242 200 59 24 chr18 26904024 26904109 -59773439 + L1MB4 LINE L1 6093 6180 0 21 0 0 0 chr18 26904320 26904341 -59773207 + AT_rich Low_complexity Low_complexity 1 21 0 2201 98 10 0 chr18 26905235 26905530 -59772018 + AluSq SINE Alu 1 298 -15 24 53 0 0 chr18 26905662 26905700 -59771848 + AT_rich Low_complexity Low_complexity 1 38 0 1244 196 9 0 chr18 26908807 26909027 -59768521 + MER58A DNA MER1_type 2 223 -1 26 50 0 0 chr18 26909321 26909361 -59768187 + AT_rich Low_complexity Low_complexity 1 40 0 302 148 0 0 chr18 26910195 26910249 -59767299 + L1MB7 LINE L1 6131 6184 0 267 31 0 0 chr18 26911172 26911204 -59766344 + (A)n Simple_repeat Simple_repeat 1 32 0 224 396 0 10 chr18 26911841 26911942 -59765606 - MIR3 SINE MIR -102 106 7 2119 121 0 3 chr18 26913144 26913449 -59764099 + AluSq SINE Alu 1 304 -9 25 75 0 0 chr18 26914946 26914999 -59762549 + AT_rich Low_complexity Low_complexity 1 53 0 481 260 92 52 chr18 26915005 26915255 -59762293 - MIR SINE MIR 0 262 3 241 209 0 0 chr18 26916017 26916060 -59761488 + MER20 DNA MER1_type 3 45 -174 247 250 62 12 chr18 26916101 26916181 -59761367 - L2 LINE L2 -65 3248 3165 2263 98 3 10 chr18 26916322 26916627 -59760921 - AluSx SINE Alu -9 303 1 440 287 102 62 chr18 26916757 26917001 -59760547 + MER77 LTR ERV1 192 445 -160 1541 248 80 43 chr18 26917001 26917578 -59759970 + L2 LINE L2 2490 3152 -161 5352 179 34 33 chr18 26917678 26917904 -59759644 - Tigger6a DNA MER2_type -519 1078 854 2169 111 0 40 chr18 26917904 26918229 -59759319 + AluSx SINE Alu 1 312 0 5352 179 34 33 chr18 26918229 26919079 -59758469 - Tigger6a DNA MER2_type -743 854 1 292 201 94 148 chr18 26919094 26919243 -59758305 + MIR SINE MIR 120 260 -2 249 108 0 0 chr18 26919263 26919300 -59758248 + (A)n Simple_repeat Simple_repeat 1 37 0 244 321 0 0 chr18 26919321 26919405 -59758143 + MER103 DNA DNA 35 118 -48 2195 80 0 41 chr18 26919560 26919874 -59757674 + AluY SINE Alu 1 301 -10 586 279 161 28 chr18 26919991 26920450 -59757098 + L1MC4a LINE L1 5331 5850 -1958 191 254 0 51 chr18 26920985 26921044 -59756504 - MIR SINE MIR -148 114 59 337 274 133 22 chr18 26921376 26921511 -59756037 - L2 LINE L2 -43 3270 3121 1488 175 17 20 chr18 26921523 26921820 -59755728 - AluJo SINE Alu -16 296 1 1750 143 42 7 chr18 26921969 26922256 -59755292 + AluSx SINE Alu 1 297 -15 25 31 0 0 chr18 26922341 26922373 -59755175 + AT_rich Low_complexity Low_complexity 1 32 0 1418 69 0 21 chr18 26922725 26922945 -59754603 + AluYa5 SINE Alu 98 313 0 757 139 7 51 chr18 26923061 26923198 -59754350 + FLAM_C SINE Alu 3 133 -10 28 48 0 0 chr18 26923798 26923840 -59753708 + AT_rich Low_complexity Low_complexity 1 42 0 334 295 96 18 chr18 26925107 26925507 -59752041 + L1P LINE L1 4734 5165 -981 23 68 0 0 chr18 26925525 26925569 -59751979 + AT_rich Low_complexity Low_complexity 1 44 0 486 223 108 56 chr18 26925600 26925851 -59751697 + L1MC4a LINE L1 5280 5543 -2265 1880 188 21 6 chr18 26925953 26926282 -59751266 + MER2 DNA MER2_type 2 335 -10 386 235 12 0 chr18 26926313 26926398 -59751150 + L1MC4a LINE L1 5574 5659 -2149 328 299 94 51 chr18 26926466 26926720 -59750828 + L1MC4a LINE L1 5695 5959 -1849 2068 133 7 0 chr18 26926748 26927042 -59750506 - AluSq SINE Alu -16 297 2 1378 102 0 5 chr18 26927189 26927375 -59750173 + AluSx SINE Alu 1 185 -127 2395 75 7 3 chr18 26927693 26927998 -59749550 - AluSc SINE Alu -3 306 1 385 338 72 21 chr18 26931063 26931394 -59746154 + L1ME LINE L1 155 502 -5703 3538 149 38 35 chr18 26931770 26932506 -59745042 + L1MB7 LINE L1 5428 6165 -19 1478 161 0 106 chr18 26932584 26932914 -59744634 + AluY SINE Alu 1 295 -16 1462 161 0 0 chr18 26932976 26933206 -59744342 + AluY SINE Alu 1 230 -81 767 273 38 20 chr18 26933335 26933679 -59743869 + L1MB7 LINE L1 5829 6183 0 465 241 0 57 chr18 26933761 26933902 -59743646 + FLAM_C SINE Alu 11 143 0 1118 153 0 0 chr18 26933905 26934081 -59743467 + AluSg/x SINE Alu 121 296 -16 351 254 140 31 chr18 26934081 26934143 -59743405 + L1ME LINE L1 850 904 -5301 2140 99 0 0 chr18 26934143 26934450 -59743098 + AluY SINE Alu 1 307 0 351 254 140 31 chr18 26934450 26934579 -59742969 + L1ME LINE L1 904 1063 -5142 6461 251 109 40 chr18 26934599 26935090 -59742458 + L1ME LINE L1 1401 1857 -4358 1825 144 10 3 chr18 26935090 26935382 -59742166 + AluSx SINE Alu 1 294 -18 6461 251 109 40 chr18 26935382 26936349 -59741199 + L1ME LINE L1 1857 2756 -3459 2309 72 7 0 chr18 26936349 26936642 -59740906 + AluY SINE Alu 1 295 -16 6461 251 109 40 chr18 26936642 26938911 -59738637 + L1ME LINE L1 2756 5358 -857 504 0 0 0 chr18 26938912 26938968 -59738580 + (TA)n Simple_repeat Simple_repeat 2 57 0 471 230 96 7 chr18 26939037 26939172 -59738376 + L1ME1 LINE L1 6010 6156 -10 335 258 81 40 chr18 26939306 26939430 -59738118 + L2 LINE L2 3180 3308 -5 340 232 194 39 chr18 26939514 26939669 -59737879 + L2 LINE L2 2289 2467 -847 270 0 0 0 chr18 26939750 26939780 -59737768 + (CA)n Simple_repeat Simple_repeat 1 30 0 309 288 216 57 chr18 26940574 26940925 -59736623 - L2 LINE L2 -924 2390 1984 2232 110 6 56 chr18 26940951 26941306 -59736242 - MER1B DNA MER1_type 0 337 1 30 27 0 0 chr18 26942010 26942047 -59735501 + AT_rich Low_complexity Low_complexity 1 37 0 208 280 30 60 chr18 26942216 26942316 -59735232 + L2 LINE L2 2475 2571 -743 250 214 43 43 chr18 26942571 26942641 -59734907 - MER5B DNA MER1_type -4 174 105 234 91 0 0 chr18 26942657 26942690 -59734858 + (A)n Simple_repeat Simple_repeat 1 33 0 297 226 0 0 chr18 26942736 26942789 -59734759 + MER5B DNA MER1_type 125 177 -1 813 167 7 7 chr18 26943160 26943310 -59734238 + L1PB4 LINE L1 6003 6152 -4 532 254 77 114 chr18 26944095 26944698 -59732850 + L1MEd LINE L1 895 1520 -4790 1719 201 10 0 chr18 26944698 26944996 -59732552 + AluJo SINE Alu 1 301 -11 532 254 77 114 chr18 26944996 26945185 -59732363 + L1MEd LINE L1 1520 1715 -4595 327 90 6 31 chr18 26945424 26945488 -59732060 + AluY SINE Alu 1 41 -258 1103 244 190 43 chr18 26945578 26945696 -59731852 + L1MEd LINE L1 2278 2377 -3752 2221 76 0 0 chr18 26945696 26945972 -59731576 + AluY SINE Alu 32 307 -4 1103 244 190 43 chr18 26945972 26946602 -59730946 + L1MEd LINE L1 2377 3136 -2993 5034 192 93 23 chr18 26946618 26947928 -59729620 + Charlie1a DNA MER1_type 54 1455 0 3283 254 94 43 chr18 26947928 26949659 -59727889 + L1MEd LINE L1 3156 4974 -1155 959 202 34 85 chr18 26949849 26950285 -59727263 + L1MC5 LINE L1 6820 7233 -728 871 210 78 44 chr18 26950306 26950711 -59726837 + L1MC5 LINE L1 7235 7579 -382 264 57 0 0 chr18 26950731 26950766 -59726782 + U2 snRNA snRNA 1 35 -153 254 244 11 56 chr18 26950863 26950953 -59726595 + L1MC5 LINE L1 7698 7783 -178 24 0 0 0 chr18 26951463 26951487 -59726061 + AT_rich Low_complexity Low_complexity 1 24 0 512 278 44 17 chr18 26951494 26951674 -59725874 - MIR SINE MIR -20 242 58 2220 113 0 3 chr18 26951753 26952054 -59725494 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr18 26952609 26952630 -59724918 + AT_rich Low_complexity Low_complexity 1 21 0 1907 154 7 7 chr18 26952724 26953029 -59724519 - AluJb SINE Alu -7 305 1 903 184 89 80 chr18 26953805 26954142 -59723406 - L1MC4 LINE L1 0 8042 7703 557 0 0 0 chr18 26954194 26954263 -59723285 + AluYb8 SINE Alu 246 314 -4 2145 122 7 3 chr18 26954344 26954639 -59722909 - AluSx SINE Alu -16 296 1 21 36 0 0 chr18 26954798 26954826 -59722722 + AT_rich Low_complexity Low_complexity 1 28 0 1896 165 0 3 chr18 26954925 26955228 -59722320 + AluJo SINE Alu 2 303 -9 22 35 0 0 chr18 26955277 26955306 -59722242 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr18 26956017 26956039 -59721509 + AT_rich Low_complexity Low_complexity 1 22 0 1754 153 14 63 chr18 26956539 26956905 -59720643 - MER7A DNA MER2_type 0 346 1 4026 204 94 40 chr18 26957120 26958334 -59719214 + L1MC4 LINE L1 6764 8042 0 603 171 26 8 chr18 26958366 26958483 -59719065 - FLAM_C SINE Alu -24 119 1 254 310 107 28 chr18 26958499 26958715 -59718833 + L1MB8 LINE L1 5435 5667 -2141 1746 145 88 9 chr18 26959128 26959446 -59718102 - MER2 DNA MER2_type -1 343 1 1185 188 79 13 chr18 26959456 26959760 -59717788 + MER33 DNA MER1_type 1 324 0 2231 172 34 14 chr18 26960096 26960591 -59716957 + L1MB8 LINE L1 5674 6178 0 28 48 0 0 chr18 26960972 26961014 -59716534 + AT_rich Low_complexity Low_complexity 1 42 0 299 258 180 47 chr18 26961747 26961875 -59715673 + MIR3 SINE MIR 4 148 -60 223 281 48 90 chr18 26962145 26962312 -59715236 - L3b LINE CR1 -146 1437 1278 439 203 212 25 chr18 26962916 26963034 -59714514 + L2 LINE L2 3133 3272 0 22 35 0 0 chr18 26963335 26963364 -59714184 + GC_rich Low_complexity Low_complexity 1 29 0 30 83 0 0 chr18 26964880 26964952 -59712596 + AT_rich Low_complexity Low_complexity 1 72 0 1473 173 0 4 chr18 26964952 26965195 -59712353 + AluJb SINE Alu 60 301 -11 305 326 146 43 chr18 26965239 26965540 -59712008 - L2 LINE L2 -19 3294 2963 1637 157 24 31 chr18 26966948 26967235 -59710313 - AluJb SINE Alu -27 285 1 607 201 69 103 chr18 26968479 26968745 -59708803 + MLT1D LTR MaLR 1 215 -290 * 795 176 0 7 chr18 26968739 26968881 -59708667 + MLT1D LTR MaLR 365 505 0 23 54 0 0 chr18 26968929 26968966 -59708582 + AT_rich Low_complexity Low_complexity 1 37 0 627 223 0 0 chr18 26969176 26969315 -59708233 - Charlie1 DNA MER1_type 0 2761 2623 * 711 241 21 11 chr18 26969314 26969501 -59708047 - Charlie1 DNA MER1_type -2547 214 26 287 198 75 0 chr18 26969645 26969744 -59707804 + L1MEc LINE L1 2191 2300 -4096 2104 114 3 7 chr18 26969744 26970042 -59707506 + AluSc SINE Alu 1 297 -12 1692 132 75 73 chr18 26970066 26970438 -59707110 - MER51A LTR ERV1 0 634 262 243 111 0 0 chr18 26970436 26970472 -59707076 - MER51A LTR ERV1 -598 36 1 * 3361 226 105 47 chr18 26970478 26970989 -59706559 + L1M4 LINE L1 -247 233 -6047 1770 156 26 23 chr18 26970989 26971296 -59706252 + AluJo SINE Alu 1 308 -4 3361 226 105 47 chr18 26971296 26971942 -59705606 + L1M4 LINE L1 233 978 -5302 460 197 112 40 chr18 26972469 26972718 -59704830 + L1M4 LINE L1 944 1210 -5070 6985 137 48 71 chr18 26972733 26974088 -59703460 + L1MA4 LINE L1 3811 5196 -1104 2152 94 30 14 chr18 26974088 26974385 -59703163 - AluSg SINE Alu -8 302 1 6985 137 48 71 chr18 26974385 26975293 -59702255 + L1MA4 LINE L1 5196 6005 -295 2345 75 0 10 chr18 26975293 26975599 -59701949 + AluY SINE Alu 1 303 -8 6985 137 48 71 chr18 26975599 26975878 -59701670 + L1MA4 LINE L1 6005 6289 -11 1070 201 93 73 chr18 26975899 26976186 -59701362 + L1M4 LINE L1 1212 1509 -4875 2296 73 7 10 chr18 26976186 26976474 -59701074 - AluY SINE Alu -24 287 1 1070 201 93 73 chr18 26976474 26976530 -59701018 + L1M4 LINE L1 1509 1562 -4822 285 57 38 19 chr18 26976723 26976776 -59700772 + (TA)n Simple_repeat Simple_repeat 2 55 0 270 0 0 0 chr18 26976794 26976824 -59700724 + (CA)n Simple_repeat Simple_repeat 1 30 0 246 111 0 0 chr18 26976834 26976870 -59700678 + MER51A LTR ERV1 1 36 -598 1158 154 177 101 chr18 26976885 26977281 -59700267 + MER51A LTR ERV1 209 634 0 758 174 0 51 chr18 26977991 26978129 -59699419 - FLAM_C SINE Alu -2 131 1 1037 269 28 17 chr18 26978302 26978845 -59698703 + L1M4 LINE L1 1591 2228 -4156 752 231 61 13 chr18 26978883 26979112 -59698436 - MLT1A1 LTR MaLR -8 357 130 420 223 0 58 chr18 26979185 26979306 -59698242 + Charlie1 DNA MER1_type 2167 2280 -481 482 226 102 0 chr18 26979310 26979447 -59698101 + L1M4 LINE L1 5114 5264 -1118 469 152 0 81 chr18 26979447 26979546 -59698002 + AluJ/FLAM SINE Alu 1 91 -221 1986 101 4 11 chr18 26979701 26979968 -59697580 - AluSx SINE Alu -47 265 1 5204 146 3 4 chr18 26980079 26981614 -59695934 - L1PA15 LINE L1 -1 6867 5339 800 154 0 8 chr18 26981617 26981740 -59695808 - FLAM_C SINE Alu -11 132 11 10650 207 15 16 chr18 26981745 26982155 -59695393 - L1PA15 LINE L1 -1512 5337 4928 2067 134 0 0 chr18 26982155 26982453 -59695095 + AluSg SINE Alu 1 298 -12 10650 207 15 16 chr18 26982453 26982785 -59694763 - L1PA15 LINE L1 -1921 4928 4597 2246 111 7 3 chr18 26982785 26983092 -59694456 - AluSq SINE Alu 0 313 6 10650 207 15 16 chr18 26983092 26984774 -59692774 - L1PA15 LINE L1 -2252 4597 2913 1398 164 44 12 chr18 26984776 26985026 -59692522 - AluJb SINE Alu -3 309 52 361 129 3 0 chr18 26985039 26985109 -59692439 + L1PA15-16 LINE L1 2114 2184 -3962 2982 233 23 39 chr18 26985113 26986039 -59691509 - L1PA15 LINE L1 -4040 2809 1899 766 256 4 13 chr18 26986063 26986301 -59691247 - L1MEd LINE L1 -3070 3059 2824 415 167 69 0 chr18 26986304 26986376 -59691172 + AluJ/FLAM SINE Alu 1 77 -235 959 178 0 0 chr18 26986394 26986546 -59691002 + FRAM SINE Alu 4 155 -21 393 340 18 73 chr18 26986559 26986900 -59690648 - L1MEd LINE L1 -3303 2826 2505 403 227 111 6 chr18 26986920 26987092 -59690456 - L1MEd LINE L1 -3704 2425 2236 266 132 14 3 chr18 26987095 26987152 -59690396 - Alu SINE Alu -4 297 252 2667 131 5 0 chr18 26987152 26987550 -59689998 + MSTA-int LTR MaLR 1252 1651 0 1917 154 133 13 chr18 26987550 26987932 -59689616 + MSTA LTR MaLR 1 428 0 459 144 0 0 chr18 26987932 26988023 -59689525 - L1P LINE L1 -1712 4434 4344 1016 185 15 5 chr18 26988023 26988228 -59689320 + L1PA8 LINE L1 4705 4911 -1235 3280 189 76 61 chr18 26988244 26988383 -59689165 + L1PA8 LINE L1 5254 5389 -783 2290 82 0 7 chr18 26988383 26988675 -59688873 + AluY SINE Alu 1 290 -21 3280 189 76 61 chr18 26988675 26989435 -59688113 + L1PA8 LINE L1 5389 6166 -6 345 315 90 41 chr18 26989452 26989591 -59687957 - L1MEd LINE L1 -4140 2170 2039 2152 99 17 3 chr18 26989591 26989884 -59687664 - AluSg SINE Alu -9 301 5 2299 122 0 0 chr18 26989890 26990202 -59687346 - AluSx SINE Alu 0 312 1 345 315 90 41 chr18 26990202 26990398 -59687150 - L1MEd LINE L1 -4275 2035 1811 361 312 90 26 chr18 26990449 26991163 -59686385 - L1MEd LINE L1 -4612 1698 896 1503 150 83 81 chr18 26991499 26991615 -59685933 - Charlie1a DNA MER1_type -1315 1446 1332 1972 131 3 38 chr18 26991615 26991928 -59685620 - AluSx SINE Alu -10 302 1 1503 150 83 81 chr18 26991928 26992303 -59685245 - Charlie1a DNA MER1_type -1429 1332 954 265 216 0 0 chr18 26992330 26992381 -59685167 + L1PA12 LINE L1 7 57 -7524 1247 141 17 3 chr18 26992385 26992747 -59684801 - LTR19A LTR ERV1 -4 482 1 7861 229 67 18 chr18 26992747 26995467 -59682081 + L1PA12 LINE L1 53 3549 -4035 2118 119 0 7 chr18 26995467 26995761 -59681787 + AluSx SINE Alu 1 292 -20 7861 229 67 18 chr18 26995761 26996956 -59680592 + L1PA12 LINE L1 3549 4684 -2900 4705 94 1 14 chr18 26996956 26997614 -59679934 + L1PA11 LINE L1 5514 6166 -8 1845 197 67 76 chr18 26997622 26997687 -59679861 - Charlie1a DNA MER1_type -1817 944 880 2318 110 0 3 chr18 26997687 26997987 -59679561 + AluSx SINE Alu 1 299 -13 1845 197 67 76 chr18 26997987 26998368 -59679180 - Charlie1a DNA MER1_type -1881 880 505 1359 193 97 11 chr18 26998368 26998637 -59678911 - AluJo SINE Alu -20 292 1 1845 197 67 76 chr18 26998637 26998924 -59678624 - Charlie1a DNA MER1_type -2256 505 217 9962 133 13 38 chr18 26998932 27000324 -59677224 + Tigger4(Zombi) DNA MER2_type 2 1342 -1389 2034 122 14 11 chr18 27000324 27000611 -59676937 + AluSx SINE Alu 1 288 -24 9962 133 13 38 chr18 27000611 27001005 -59676543 + Tigger4(Zombi) DNA MER2_type 1342 1744 -987 2125 148 62 2 chr18 27001006 27001312 -59676236 + MSTA LTR MaLR 1 338 -90 3205 57 67 12 chr18 27001312 27001701 -59675847 + MLT2A1 LTR ERVL 1 416 -28 535 81 23 0 chr18 27001701 27001787 -59675761 + (TA)n Simple_repeat Simple_repeat 2 89 0 3205 57 67 12 chr18 27001787 27001818 -59675730 + MLT2A1 LTR ERVL 416 444 0 2125 148 62 2 chr18 27001818 27001915 -59675633 + MSTA LTR MaLR 338 428 0 5932 118 24 4 chr18 27001915 27002885 -59674663 + Tigger4(Zombi) DNA MER2_type 1741 2729 -2 861 270 15 0 chr18 27002894 27003094 -59674454 - Charlie1a DNA MER1_type -1250 205 3 21 0 0 0 chr18 27004146 27004167 -59673381 + AT_rich Low_complexity Low_complexity 1 21 0 592 278 33 11 chr18 27004419 27004599 -59672949 - MIR SINE MIR 0 262 79 311 246 101 7 chr18 27004741 27004879 -59672669 + L1MD3 LINE L1 7834 7984 -11 * 1621 244 52 0 chr18 27004872 27005314 -59672234 + L1MD2 LINE L1 5880 6344 -15 801 136 0 30 chr18 27005530 27005662 -59671886 + FLAM_C SINE Alu 1 128 -5 254 285 83 28 chr18 27005852 27005996 -59671552 - MIR SINE MIR 0 262 111 2645 42 0 0 chr18 27006121 27006432 -59671116 + AluY SINE Alu 1 311 0 441 50 0 0 chr18 27007464 27007524 -59670024 + (TG)n Simple_repeat Simple_repeat 2 61 0 2473 64 3 0 chr18 27007809 27008107 -59669441 + AluSp SINE Alu 2 300 -13 213 357 32 16 chr18 27010030 27010156 -59667392 - MIR SINE MIR -115 147 20 480 284 26 74 chr18 27010235 27010311 -59667237 + MIR SINE MIR 82 160 -102 2018 138 3 3 chr18 27010311 27010602 -59666946 + AluSx SINE Alu 1 291 -21 480 284 26 74 chr18 27010602 27010715 -59666833 + MIR SINE MIR 160 262 0 444 354 128 32 chr18 27010773 27011279 -59666269 - L2 LINE L2 0 3272 2734 353 338 113 19 chr18 27011349 27011562 -59665986 + MLT1K LTR MaLR 141 373 -215 513 317 81 42 chr18 27011739 27012121 -59665427 - L2 LINE L2 -595 2719 2323 1641 271 39 16 chr18 27012127 27012636 -59664912 + MLT1E LTR MaLR 1 521 -72 1366 225 120 28 chr18 27013010 27013747 -59663801 - L1M3c LINE L1 -4868 2169 1 312 318 150 37 chr18 27013748 27014315 -59663233 - L1 LINE L1 -2399 3747 3117 1689 167 106 0 chr18 27014839 27015121 -59662427 - AluJo SINE Alu 0 312 1 2130 65 0 0 chr18 27015173 27015434 -59662114 - AluY SINE Alu -10 301 41 1915 170 46 3 chr18 27015727 27016074 -59661474 - MLT1A1 LTR MaLR -3 362 1 4927 162 20 13 chr18 27016248 27016861 -59660687 + MER6 DNA MER2_type 2 624 -241 2058 114 0 7 chr18 27016861 27017159 -59660389 - AluSx SINE Alu -16 296 1 4927 162 20 13 chr18 27017159 27017403 -59660145 + MER6 DNA MER2_type 624 865 0 3171 211 107 30 chr18 27018056 27018241 -59659307 - L1MD2 LINE L1 -12 6347 6178 2502 77 3 0 chr18 27018241 27018553 -59658995 - AluSp SINE Alu 0 313 1 3171 211 107 30 chr18 27018553 27019356 -59658192 - L1MD2 LINE L1 -181 6178 5283 595 282 0 0 chr18 27019383 27019514 -59658034 + FLAM_A SINE Alu 1 131 -11 1661 196 7 0 chr18 27019620 27019895 -59657653 + AluJb SINE Alu 3 279 -33 2114 146 41 2 chr18 27019895 27020337 -59657211 - MSTA LTR MaLR -1 427 1 6671 214 56 61 chr18 27020362 27021976 -59655572 + L1 LINE L1 2761 4361 -1785 1567 179 47 36 chr18 27021976 27022277 -59655271 - AluJo SINE Alu -8 304 1 6671 214 56 61 chr18 27022277 27023038 -59654510 + L1 LINE L1 4361 5124 -1022 1338 125 52 35 chr18 27023139 27023371 -59654177 + MER46A DNA MER2_type 1 236 0 1346 191 0 12 chr18 27023476 27023727 -59653821 - AluJo SINE Alu -16 296 49 2021 159 0 9 chr18 27025445 27025760 -59651788 - AluJo SINE Alu 0 312 1 1366 209 82 34 chr18 27025785 27026163 -59651385 + MSTD LTR MaLR 1 396 0 23 54 0 0 chr18 27026254 27026291 -59651257 + AT_rich Low_complexity Low_complexity 1 37 0 257 290 66 35 chr18 27026521 27026780 -59650768 - L1ME LINE L1 -517 5604 5338 610 329 14 14 chr18 27026792 27027008 -59650540 + MIR SINE MIR 13 228 -34 2126 141 0 0 chr18 27027025 27027337 -59650211 - AluSx SINE Alu 0 312 1 1983 104 0 15 chr18 27027737 27028035 -59649513 - AluSc SINE Alu 0 310 17 1492 146 8 24 chr18 27028135 27028389 -59649159 + AluSx SINE Alu 19 268 -44 213 65 0 0 chr18 27028400 27028431 -59649117 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 280 291 48 10 chr18 27028701 27028804 -59648744 + MIR SINE MIR 130 236 -26 993 161 25 91 chr18 27028873 27029035 -59648513 + MER1B DNA MER1_type 1 143 -236 2184 96 10 0 chr18 27029035 27029328 -59648220 + AluSx SINE Alu 1 296 -16 993 161 25 91 chr18 27029328 27029408 -59648140 + MER1B DNA MER1_type 143 227 -112 858 142 15 0 chr18 27029554 27029688 -59647860 + AluJo SINE Alu 1 136 -176 283 212 47 0 chr18 27030086 27030171 -59647377 + A-rich Low_complexity Low_complexity 1 89 0 46 0 0 0 chr18 27030309 27030355 -59647193 + AT_rich Low_complexity Low_complexity 1 46 0 470 250 0 0 chr18 27031305 27031397 -59646151 + AluS SINE Alu 1 92 -221 35 24 0 0 chr18 27031595 27031637 -59645911 + AT_rich Low_complexity Low_complexity 1 42 0 1979 141 7 0 chr18 27031637 27031935 -59645613 + AluJb SINE Alu 1 300 -12 260 144 76 8 chr18 27031958 27032076 -59645472 + (TA)n Simple_repeat Simple_repeat 1 126 0 3934 161 11 13 chr18 27032082 27033383 -59644165 - L1MA5 LINE L1 -326 5974 4674 1904 142 7 24 chr18 27033475 27033771 -59643777 - AluSx SINE Alu -16 296 6 1012 99 0 0 chr18 27033896 27034027 -59643521 - AluSq/x SINE Alu -182 131 1 194 326 174 7 chr18 27034160 27034304 -59643244 - MIR3 SINE MIR -11 197 30 188 412 0 15 chr18 27034472 27034540 -59643008 - L2 LINE L2 -96 3176 3110 1911 161 0 3 chr18 27034608 27034907 -59642641 - AluJb SINE Alu -14 298 1 6679 128 12 19 chr18 27034932 27035833 -59641715 - L1MA2 LINE L1 0 6304 5414 1893 138 0 18 chr18 27035833 27036115 -59641433 - AluJb SINE Alu -21 291 15 6679 128 12 19 chr18 27036115 27037027 -59640521 - L1MA2 LINE L1 -890 5414 4497 4101 201 6 9 chr18 27037041 27037953 -59639595 - L1MA2 LINE L1 -3112 3034 2126 334 151 0 0 chr18 27037958 27038011 -59639537 - AluJ/FLAM SINE Alu -241 61 9 2041 127 0 7 chr18 27038022 27038313 -59639235 - AluSx SINE Alu -23 289 1 653 300 53 11 chr18 27038384 27038647 -59638901 - L1MEd LINE L1 -5842 277 4 330 235 247 2 chr18 27038966 27039098 -59638450 - MIR SINE MIR -71 137 27 2301 89 3 32 chr18 27039098 27039412 -59638136 - AluSg SINE Alu -1 309 5 285 325 55 25 chr18 27039962 27040162 -59637386 + MLT1L LTR MaLR 410 615 0 2315 102 3 3 chr18 27040267 27040571 -59636977 - AluSq SINE Alu -9 304 1 2320 106 0 3 chr18 27040583 27040885 -59636663 - AluSx SINE Alu -11 301 1 11585 104 116 98 chr18 27041182 27041954 -59635594 - Tigger1 DNA MER2_type 0 2418 1661 2316 112 0 6 chr18 27041954 27042266 -59635282 - AluSx SINE Alu -2 310 1 2131 130 0 3 chr18 27042266 27042567 -59634981 - AluSx SINE Alu -12 300 1 759 215 0 0 chr18 27042571 27042692 -59634856 - FLAM_C SINE Alu -21 122 2 11585 104 116 98 chr18 27042692 27043436 -59634112 - Tigger1 DNA MER2_type -759 1659 930 1582 96 5 0 chr18 27043436 27043645 -59633903 - AluSg/x SINE Alu -14 296 87 11585 104 116 98 chr18 27043645 27044324 -59633224 - Tigger1 DNA MER2_type -1488 930 54 391 335 80 16 chr18 27044324 27044554 -59632994 - MIR SINE MIR -12 250 11 315 0 0 0 chr18 27044645 27044680 -59632868 + (TG)n Simple_repeat Simple_repeat 2 36 0 203 30 0 61 chr18 27044994 27045027 -59632521 + (CAAAAA)n Simple_repeat Simple_repeat 6 36 0 1997 123 25 7 chr18 27045122 27045406 -59632142 - AluSx SINE Alu -22 290 2 768 131 0 83 chr18 27045418 27045563 -59631985 - FLAM_A SINE Alu 0 142 10 791 158 23 23 chr18 27046218 27046351 -59631197 + FLAM_C SINE Alu 1 133 0 1702 178 36 10 chr18 27047018 27047321 -59630227 - AluJo SINE Alu -1 311 1 1732 174 0 14 chr18 27047424 27047717 -59629831 - AluJo SINE Alu -23 289 1 710 268 28 67 chr18 27048117 27048263 -59629285 - MIR SINE MIR -11 251 118 985 183 66 42 chr18 27048263 27048476 -59629072 - MER20 DNA MER1_type -1 218 1 710 268 28 67 chr18 27048476 27048583 -59628965 - MIR SINE MIR -144 118 8 2116 120 7 0 chr18 27048707 27048998 -59628550 - AluSx SINE Alu -19 293 1 286 197 33 16 chr18 27049760 27049821 -59627727 + MLT1J LTR MaLR 245 306 -205 1311 260 39 11 chr18 27049987 27050345 -59627203 + LTR16A LTR ERVL 22 389 -61 863 263 86 51 chr18 27051701 27051793 -59625755 - L2 LINE L2 0 3313 3226 2427 91 3 0 chr18 27051793 27052100 -59625448 + AluSp SINE Alu 1 308 -5 863 263 86 51 chr18 27052100 27052598 -59624950 - L2 LINE L2 -87 3226 2687 960 275 64 10 chr18 27052614 27052912 -59624636 + LTR40c LTR ERVL 39 352 -113 24 32 0 0 chr18 27052980 27053011 -59624537 + AT_rich Low_complexity Low_complexity 1 31 0 771 230 74 46 chr18 27053162 27053379 -59624169 + MER58A DNA MER1_type 2 224 0 388 160 53 0 chr18 27053393 27053468 -59624080 - Charlie1 DNA MER1_type -34 2727 2649 1665 204 25 25 chr18 27053513 27053881 -59623667 + LTR40c LTR ERVL 98 465 0 2345 98 0 0 chr18 27053902 27054197 -59623351 - AluSx SINE Alu -17 295 1 233 52 172 35 chr18 27054198 27054256 -59623292 - Charlie1 DNA MER1_type -120 2641 2576 380 343 66 0 chr18 27055220 27055401 -59622147 + L1ME LINE L1 5577 5769 -401 338 313 77 16 chr18 27055407 27055589 -59621959 - LTR16C LTR ERVL 0 491 299 1950 120 7 27 chr18 27055790 27056090 -59621458 - AluSp SINE Alu -18 295 2 400 243 150 14 chr18 27056172 27056312 -59621236 - L2 LINE L2 -667 2647 2489 970 214 62 4 chr18 27056369 27056381 -59621167 + HAL1 LINE L1 1510 1520 -987 1678 162 55 0 chr18 27056381 27056653 -59620895 + AluJb SINE Alu 1 287 -25 970 214 62 4 chr18 27056653 27056897 -59620651 + HAL1 LINE L1 1520 1781 -726 682 190 8 0 chr18 27056955 27057076 -59620472 + FLAM_A SINE Alu 1 122 -11 189 0 0 0 chr18 27057138 27057159 -59620389 + (A)n Simple_repeat Simple_repeat 1 21 0 917 121 0 28 chr18 27057905 27058046 -59619502 + AluSq/x SINE Alu 3 139 -173 872 224 0 0 chr18 27059458 27059610 -59617938 + FRAM SINE Alu 1 151 -25 1626 208 0 10 chr18 27060654 27060948 -59616600 + AluJo SINE Alu 3 293 -19 284 267 0 12 chr18 27061337 27061423 -59616125 + ERVL LTR ERVL 5291 5375 -389 1001 294 83 50 chr18 27061458 27062222 -59615326 - ERVL LTR ERVL -427 5227 4476 914 167 40 0 chr18 27062234 27062384 -59615164 + FAM SINE Alu 11 166 -19 484 275 13 13 chr18 27062391 27062540 -59615008 - ERVL LTR ERVL -1210 4444 4296 2268 127 27 37 chr18 27062668 27063070 -59614478 - L1MA7 LINE L1 -12 6279 5882 278 238 128 43 chr18 27063116 27063216 -59614332 + L1MEd LINE L1 26 148 -5971 2295 85 0 3 chr18 27063216 27063524 -59614024 + AluY SINE Alu 1 307 0 278 238 128 43 chr18 27063524 27063586 -59613962 + L1MEd LINE L1 148 203 -5916 862 294 101 53 chr18 27063659 27063834 -59613714 - L2 LINE L2 -6 3307 3142 444 82 0 0 chr18 27063834 27063895 -59613653 + (TA)n Simple_repeat Simple_repeat 2 62 0 862 294 101 53 chr18 27063895 27064134 -59613414 - L2 LINE L2 -171 3142 2873 483 172 0 35 chr18 27064152 27064239 -59613309 + Tigger4(Zombi) DNA MER2_type 1 84 -2647 795 267 33 69 chr18 27064242 27064545 -59613003 - L2 LINE L2 -445 2869 2578 813 215 93 24 chr18 27064553 27064800 -59612748 - L2 LINE L2 -1225 2089 1826 856 109 0 0 chr18 27064801 27064911 -59612637 + FLAM_C SINE Alu 14 123 -20 1247 244 170 33 chr18 27064954 27065495 -59612053 + L1MC4 LINE L1 7205 7819 -223 1819 138 33 0 chr18 27065528 27065841 -59611707 - AluSx SINE Alu 0 322 1 295 217 92 50 chr18 27065972 27066092 -59611456 + L1MC4 LINE L1 7918 8042 0 347 284 28 0 chr18 27066095 27066204 -59611344 - L2 LINE L2 -1497 1817 1706 396 234 75 0 chr18 27066232 27066339 -59611209 - L2 LINE L2 0 3313 3199 2320 104 0 19 chr18 27066446 27066763 -59610785 + AluSx SINE Alu 1 311 -1 3871 188 103 83 chr18 27066881 27068116 -59609432 + Charlie1a DNA MER1_type 3 1276 -179 1331 190 73 84 chr18 27068116 27068485 -59609063 + MLT1B LTR MaLR 1 365 -25 369 270 148 37 chr18 27068528 27068717 -59608831 - HAL1 LINE L1 -2 2505 2296 * 481 256 189 33 chr18 27068703 27069132 -59608416 - HAL1 LINE L1 0 2507 2012 587 221 16 8 chr18 27069199 27069326 -59608222 - FLAM_A SINE Alu -5 128 1 661 280 58 0 chr18 27069396 27069621 -59607927 - HAL1 LINE L1 -740 1767 1530 1132 278 81 19 chr18 27069783 27070201 -59607347 + LTR33 LTR ERVL 45 488 -33 2517 174 64 21 chr18 27070201 27070685 -59606863 + MLT2B1 LTR ERVL 1 505 -15 836 103 9 0 chr18 27070705 27070821 -59606727 - AluSq/x SINE Alu -196 117 1 394 171 0 0 chr18 27070822 27070892 -59606656 + L1ME LINE L1 5584 5653 -511 2158 94 7 39 chr18 27071054 27071201 -59606347 + AluSq SINE Alu 1 134 -179 2480 61 3 29 chr18 27071201 27071514 -59606034 + AluSp SINE Alu 1 305 -8 2158 94 7 39 chr18 27071514 27071673 -59605875 + AluSq SINE Alu 134 297 -16 2152 126 0 7 chr18 27071685 27071986 -59605562 + AluSx SINE Alu 1 299 -13 2215 94 3 3 chr18 27071993 27072280 -59605268 + AluSx SINE Alu 5 291 -21 327 246 27 45 chr18 27072418 27072528 -59605020 + L1ME LINE L1 4 111 -6008 1903 142 10 7 chr18 27072532 27072820 -59604728 + AluJb SINE Alu 1 289 -23 251 247 101 0 chr18 27072855 27072944 -59604604 + L1ME LINE L1 105 202 -5917 975 285 34 42 chr18 27072982 27073132 -59604416 + L1ME LINE L1 4790 4940 -1189 2124 93 11 0 chr18 27073132 27073439 -59604109 + AluSx SINE Alu 1 310 0 2450 57 0 3 chr18 27073441 27073740 -59603808 + AluY SINE Alu 1 298 -13 975 285 34 42 chr18 27073740 27074062 -59603486 + L1ME LINE L1 4941 5262 -867 400 173 67 48 chr18 27074285 27074389 -59603159 + L1MEd LINE L1 11 116 -6003 403 169 0 0 chr18 27074389 27074448 -59603100 + AluJ/FLAM SINE Alu 2 60 -252 594 286 38 27 chr18 27074482 27074788 -59602760 + L1ME LINE L1 5352 5667 -480 3914 183 47 41 chr18 27074789 27075205 -59602343 - MER21B LTR ERV1 -41 822 410 1855 156 7 7 chr18 27075205 27075500 -59602048 + AluSx SINE Alu 1 295 -17 1904 122 49 14 chr18 27075500 27075788 -59601760 + AluSx SINE Alu 1 298 -14 3914 183 47 41 chr18 27075788 27076181 -59601367 - MER21B LTR ERV1 -452 411 7 761 184 0 22 chr18 27076207 27076343 -59601205 + FRAM SINE Alu 31 163 -13 357 281 48 24 chr18 27076343 27076510 -59601038 - L1M4 LINE L1 -736 5442 5272 363 225 238 49 chr18 27076584 27076729 -59600819 - MLT1J1 LTR MaLR 0 450 334 2418 97 0 0 chr18 27076729 27077040 -59600508 - AluY SINE Alu 0 311 1 363 225 238 49 chr18 27077040 27077125 -59600423 - MLT1J1 LTR MaLR -116 334 186 1423 153 129 207 chr18 27077180 27077553 -59599995 + L1 LINE L1 3975 4376 -1770 920 89 32 0 chr18 27077553 27077676 -59599872 + AluSg/x SINE Alu 170 296 -16 1423 153 129 207 chr18 27077676 27077806 -59599742 + L1 LINE L1 4376 4538 -1608 8629 42 1 0 chr18 27077806 27078774 -59598774 - LTR5 LTR ERVK 0 969 1 1423 153 129 207 chr18 27078774 27078875 -59598673 + L1 LINE L1 4538 4645 -1501 1828 146 3 51 chr18 27078898 27079213 -59598335 + AluJb SINE Alu 1 300 -12 2136 133 10 0 chr18 27079219 27079528 -59598020 + AluSx SINE Alu 1 312 0 248 328 221 8 chr18 27079590 27079712 -59597836 - MER5A DNA MER1_type -1 188 41 1040 244 119 36 chr18 27079796 27080253 -59597295 + L2 LINE L2 2801 3309 -4 2271 108 3 0 chr18 27080300 27080595 -59596953 + AluSx SINE Alu 1 296 -16 539 170 22 7 chr18 27081406 27081541 -59596007 + GA-rich Low_complexity Low_complexity 2 138 0 2322 95 0 22 chr18 27082048 27082365 -59595183 - AluSg SINE Alu 0 310 1 2062 133 3 7 chr18 27083112 27083412 -59594136 - AluSx SINE Alu -13 299 1 1877 166 3 3 chr18 27083719 27084014 -59593534 - AluJo SINE Alu -17 295 1 199 348 165 9 chr18 27084087 27084202 -59593346 + L2 LINE L2 3030 3162 -110 2076 130 0 10 chr18 27084387 27084686 -59592862 + AluSp SINE Alu 1 296 -17 2000 142 3 7 chr18 27084714 27085016 -59592532 + AluSx SINE Alu 1 301 -11 764 196 115 0 chr18 27085172 27085320 -59592228 + FRAM SINE Alu 1 165 -11 633 209 38 100 chr18 27085342 27085552 -59591996 + Charlie1a DNA MER1_type 2 198 -1257 1903 86 47 29 chr18 27085568 27085900 -59591648 - AluY SINE Alu 0 337 1 1802 127 0 118 chr18 27085911 27086234 -59591314 - AluJb SINE Alu -16 286 2 2235 158 158 14 chr18 27086235 27086750 -59590798 + MLT2B3 LTR ERVL 5 534 0 4695 184 59 18 chr18 27086765 27087794 -59589754 + Charlie1a DNA MER1_type 192 1263 -192 1867 139 26 42 chr18 27087796 27088106 -59589442 + AluJo SINE Alu 1 305 -7 2038 124 0 3 chr18 27088125 27088435 -59589113 + AluSg SINE Alu 1 309 0 346 273 55 0 chr18 27088484 27088594 -59588954 + LTR50 LTR ERVL 1 116 -679 269 264 137 58 chr18 27088803 27089003 -59588545 + LTR50 LTR ERVL 487 716 -79 2121 146 0 0 chr18 27089003 27089304 -59588244 - AluSx SINE Alu -11 301 1 269 264 137 58 chr18 27089304 27089380 -59588168 + LTR50 LTR ERVL 716 785 -10 487 179 0 26 chr18 27089388 27089505 -59588043 + Charlie1a DNA MER1_type 1271 1384 -71 2012 103 11 14 chr18 27089534 27089851 -59587697 + AluSg SINE Alu 1 316 0 823 165 0 0 chr18 27089885 27090012 -59587536 + AluJb SINE Alu 1 127 -185 246 259 0 0 chr18 27090044 27090098 -59587450 + MER103 DNA DNA 58 111 -55 856 161 0 0 chr18 27090790 27090920 -59586628 - FLAM_C SINE Alu -13 130 1 2192 115 3 0 chr18 27091117 27091413 -59586135 + AluSp SINE Alu 1 297 -16 409 208 133 17 chr18 27091413 27091533 -59586015 - L2 LINE L2 -1 3312 3179 271 321 99 38 chr18 27091570 27091782 -59585766 + L2 LINE L2 1997 2221 -1093 297 337 17 52 chr18 27091850 27092022 -59585526 + L2 LINE L2 2362 2527 -787 2339 111 0 0 chr18 27092076 27092373 -59585175 + AluSx SINE Alu 1 297 -15 1828 160 3 7 chr18 27092373 27092666 -59584882 - AluJb SINE Alu -20 292 1 1415 239 43 3 chr18 27092666 27093035 -59584513 + L1MC4 LINE L1 7101 7484 -558 1572 167 6 55 chr18 27093036 27093347 -59584201 + AluJb SINE Alu 1 296 -16 2066 117 14 7 chr18 27093349 27093639 -59583909 + AluSx SINE Alu 1 292 -20 29 28 0 0 chr18 27093639 27093675 -59583873 + AT_rich Low_complexity Low_complexity 1 36 0 242 159 72 58 chr18 27093679 27093748 -59583800 + L1MC4 LINE L1 7830 7899 -143 3313 211 17 14 chr18 27093761 27094404 -59583144 + MER82 DNA MER2_type 2 646 -7 268 163 62 38 chr18 27094476 27094556 -59582992 + L1MC4 LINE L1 7918 7999 -43 305 148 0 19 chr18 27094569 27094623 -59582925 + MER82 DNA MER2_type 388 440 -213 1606 179 57 0 chr18 27094624 27094887 -59582661 - AluJo SINE Alu -34 278 1 247 130 22 0 chr18 27094901 27094947 -59582601 + L1MD3 LINE L1 7941 7987 -8 195 365 17 0 chr18 27095017 27095132 -59582416 + L2 LINE L2 2794 2910 -404 649 188 0 39 chr18 27095434 27095562 -59581986 + FLAM_C SINE Alu 2 124 -19 1448 196 14 11 chr18 27095734 27096015 -59581533 + AluJo SINE Alu 1 282 -30 321 26 0 0 chr18 27096018 27096056 -59581492 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 249 350 55 64 chr18 27096066 27096277 -59581271 - L2 LINE L2 -639 2675 2466 2003 121 10 3 chr18 27096277 27096575 -59580973 - AluSx SINE Alu -12 300 1 249 350 55 64 chr18 27096575 27096674 -59580874 - L2 LINE L2 -848 2466 2368 291 283 0 0 chr18 27096678 27096738 -59580810 - MER2 DNA MER2_type 0 345 286 362 294 72 22 chr18 27096773 27096953 -59580595 - L2 LINE L2 -974 2340 2152 196 385 19 0 chr18 27097260 27097364 -59580184 - L2 LINE L2 -265 3007 2902 679 270 0 6 chr18 27097606 27097769 -59579779 + L2 LINE L2 1404 1565 -1749 730 213 27 7 chr18 27097780 27097930 -59579618 - FAM SINE Alu -19 166 14 1130 223 133 28 chr18 27097930 27098329 -59579219 + L2 LINE L2 1553 1993 -1321 2096 131 7 0 chr18 27098338 27098635 -59578913 - AluSx SINE Alu -13 299 1 1990 157 0 3 chr18 27099270 27099564 -59577984 - AluSx SINE Alu -18 294 2 1147 178 10 92 chr18 27099597 27099739 -59577809 + AluJb SINE Alu 11 118 -194 222 37 0 0 chr18 27099739 27099766 -59577782 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1147 178 10 92 chr18 27099766 27099916 -59577632 + AluJb SINE Alu 118 279 -33 357 24 0 0 chr18 27099961 27100003 -59577545 + (CA)n Simple_repeat Simple_repeat 2 43 0 263 273 11 34 chr18 27100330 27100418 -59577130 - L2 LINE L2 0 3272 3187 1014 220 67 5 chr18 27100840 27101049 -59576499 - MLT1A1 LTR MaLR 0 365 144 23 0 0 0 chr18 27101049 27101072 -59576476 + AT_rich Low_complexity Low_complexity 1 23 0 435 190 120 0 chr18 27101075 27101175 -59576373 - L1MA7 LINE L1 -7 6284 6173 507 145 6 0 chr18 27101180 27101266 -59576282 - MLT1A1 LTR MaLR -233 132 59 1198 153 136 34 chr18 27101301 27101573 -59575975 + AluJo SINE Alu 24 319 0 195 42 0 0 chr18 27103622 27103646 -59573902 + (TGAA)n Simple_repeat Simple_repeat 4 27 0 845 146 15 0 chr18 27103651 27103788 -59573760 - FRAM SINE Alu -37 139 1 705 123 0 19 chr18 27104628 27104734 -59572814 + AluSg/x SINE Alu 174 277 -33 2417 97 3 0 chr18 27105463 27105774 -59571774 - AluSx SINE Alu 0 312 1 228 182 0 0 chr18 27105937 27105981 -59571567 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 2203 94 10 13 chr18 27107007 27107306 -59570242 - AluSp SINE Alu -5 308 11 2060 148 3 3 chr18 27107318 27107622 -59569926 - AluSx SINE Alu -4 308 5 682 118 13 1 chr18 27107628 27107748 -59569800 - LTR12 LTR ERV1 0 714 481 336 184 46 35 chr18 27107749 27107836 -59569712 - LTR30 LTR ERV1 -79 643 556 356 131 16 0 chr18 27107836 27107897 -59569651 - LTR12 LTR ERV1 -425 289 228 1555 128 4 8 chr18 27107954 27108189 -59569359 - LTR12 LTR ERV1 -480 234 1 10420 98 3 10 chr18 27108200 27109653 -59567895 - HERV9 LTR ERV1 -2 8397 6955 * 32270 105 13 10 chr18 27109652 27114524 -59563024 - HERV9 LTR ERV1 -2858 5541 574 41640 65 7 2 chr18 27114564 27120684 -59556864 - L1PA5 LINE L1 -1 6153 1 3849 110 2 0 chr18 27120685 27121213 -59556335 - HERV9 LTR ERV1 -7817 582 54 522 137 0 0 chr18 27121229 27121302 -59556246 - LTR12 LTR ERV1 -130 584 512 325 197 33 98 chr18 27121302 27121424 -59556124 - LTR30 LTR ERV1 -56 666 553 322 133 93 13 chr18 27121425 27121500 -59556048 - LTR12 LTR ERV1 -429 285 205 954 201 5 19 chr18 27121513 27121722 -59555826 - LTR12 LTR ERV1 -456 258 53 258 231 0 0 chr18 27121722 27121774 -59555774 - LTR30 LTR ERV1 -670 52 1 671 267 50 23 chr18 27121791 27122049 -59555499 - L1MC/D LINE L1 -1988 5820 5556 237 364 0 0 chr18 27122180 27122257 -59555291 + L3 LINE CR1 482 558 -1019 320 174 29 14 chr18 27122437 27122506 -59555042 + MIR SINE MIR 47 116 -146 2228 99 7 0 chr18 27122514 27122806 -59554742 - AluSx SINE Alu -18 294 1 2133 108 3 46 chr18 27122814 27123138 -59554410 - AluSp SINE Alu -3 310 1 1802 166 20 3 chr18 27123572 27123867 -59553681 + AluSx SINE Alu 1 300 -12 1489 181 18 11 chr18 27123867 27124144 -59553404 - AluJb SINE Alu -28 284 6 207 0 0 0 chr18 27124252 27124275 -59553273 + (A)n Simple_repeat Simple_repeat 1 23 0 2127 93 7 14 chr18 27124288 27124577 -59552971 + AluSp SINE Alu 11 297 -16 298 313 16 16 chr18 27124873 27125001 -59552547 - L1M4b LINE L1 -4603 2535 2408 1503 180 35 25 chr18 27125015 27125298 -59552250 - AluJo SINE Alu -21 291 6 5888 223 121 27 chr18 27125344 27125595 -59551953 - L1M4b LINE L1 -4831 2024 1798 7599 39 5 0 chr18 27125595 27126957 -59550591 - L1PA5 LINE L1 0 6154 4789 5888 223 121 27 chr18 27126957 27127483 -59550065 - L1M4b LINE L1 -5057 1798 1323 2775 6 0 58 chr18 27127483 27127810 -59549738 - AluYa5 SINE Alu -3 308 1 5888 223 121 27 chr18 27127810 27128788 -59548760 - L1M4b LINE L1 -5532 1323 108 1641 178 0 20 chr18 27128788 27129091 -59548457 - AluSx SINE Alu -15 297 1 5888 223 121 27 chr18 27129091 27129208 -59548340 - L1M4b LINE L1 -6747 108 3 1658 173 10 39 chr18 27129252 27129564 -59547984 - AluJo SINE Alu -9 303 1 525 250 13 26 chr18 27129645 27129801 -59547747 - L1MC/D LINE L1 -599 5565 5412 319 236 79 29 chr18 27129821 27129961 -59547587 - L1MC/D LINE L1 -872 5274 5128 847 150 13 26 chr18 27130020 27130173 -59547375 - FRAM SINE Alu -6 170 20 1567 151 98 53 chr18 27130307 27130467 -59547081 - LTR56 LTR ERV1 0 445 294 2045 104 56 7 chr18 27130467 27130754 -59546794 + AluSx SINE Alu 1 301 -11 1567 151 98 53 chr18 27130754 27130998 -59546550 - LTR56 LTR ERV1 -151 294 31 523 279 40 18 chr18 27131015 27131241 -59546307 - L1MC/D LINE L1 -1188 4958 4728 1443 190 28 35 chr18 27131875 27132165 -59545383 - AluJo SINE Alu -24 288 1 1272 141 0 11 chr18 27132201 27132385 -59545163 - AluSq SINE Alu -131 182 1 2274 98 10 0 chr18 27132424 27132720 -59544828 - AluSp SINE Alu -14 299 1 2487 77 0 3 chr18 27132890 27133200 -59544348 + AluY SINE Alu 1 309 -2 21 0 0 0 chr18 27133225 27133246 -59544302 + AT_rich Low_complexity Low_complexity 1 21 0 299 64 0 21 chr18 27134471 27134518 -59543030 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 1983 136 7 4 chr18 27134521 27134801 -59542747 - AluSx SINE Alu -31 281 1 323 379 20 30 chr18 27134885 27135186 -59542362 - MERVL LTR ERVL -666 4819 4522 408 278 196 5 chr18 27135347 27135556 -59541992 - MIR SINE MIR -12 250 2 306 288 81 0 chr18 27135578 27135689 -59541859 - L1ME LINE L1 -459 5662 5543 23 68 0 0 chr18 27136233 27136277 -59541271 + AT_rich Low_complexity Low_complexity 1 44 0 706 160 0 17 chr18 27136277 27136396 -59541152 - FLAM_C SINE Alu -25 118 2 324 153 337 0 chr18 27136424 27136522 -59541026 + Charlie4 DNA MER1_type 12 142 -1819 446 248 25 38 chr18 27136544 27136701 -59540847 + Charlie4 DNA MER1_type 79 233 -1728 2211 100 0 10 chr18 27137410 27137711 -59539837 + AluSx SINE Alu 1 298 -14 1114 165 44 22 chr18 27137711 27137950 -59539598 - MER61B LTR ERV1 -73 352 15 1261 169 64 0 chr18 27137972 27138191 -59539357 - MER1B DNA MER1_type -64 233 1 261 301 119 27 chr18 27138792 27139128 -59538420 - L1M4 LINE L1 -2443 3703 3337 758 191 0 0 chr18 27139339 27139465 -59538083 - FLAM_C SINE Alu -7 126 1 299 270 32 52 chr18 27140112 27140274 -59537274 - MIR SINE MIR -61 147 37 2120 126 3 0 chr18 27140904 27141222 -59536326 - AluSx SINE Alu 0 319 1 294 120 0 0 chr18 27141347 27141397 -59536151 - L1MA9 LINE L1 -34 6278 6229 2461 106 0 0 chr18 27141501 27141812 -59535736 + AluSx SINE Alu 2 312 0 199 213 49 16 chr18 27141891 27141952 -59535596 + MIR SINE MIR 79 141 -121 1357 183 91 54 chr18 27142726 27142857 -59534691 - Charlie1a DNA MER1_type -1306 1455 1330 1705 176 0 14 chr18 27142857 27143152 -59534396 - AluJo SINE Alu -21 291 1 1357 183 91 54 chr18 27143152 27143462 -59534086 - Charlie1a DNA MER1_type -1431 1330 998 * 2775 221 76 39 chr18 27143461 27144066 -59533482 - Charlie1a DNA MER1_type -1865 896 252 1521 191 7 19 chr18 27144066 27144375 -59533173 - AluJo SINE Alu -7 305 1 2775 221 76 39 chr18 27144375 27144585 -59532963 - Charlie1a DNA MER1_type -2509 252 51 5589 177 59 17 chr18 27144674 27145525 -59532023 + L1PA16 LINE L1 4014 4828 -1338 1895 154 0 17 chr18 27145525 27145823 -59531725 + AluSx SINE Alu 3 295 -17 5589 177 59 17 chr18 27145823 27147036 -59530512 + L1PA16 LINE L1 4828 6156 -10 10849 142 34 17 chr18 27148083 27149534 -59528014 - Tigger1 DNA MER2_type 0 2418 928 2147 107 3 13 chr18 27149534 27149834 -59527714 + AluSx SINE Alu 1 297 -15 10849 142 34 17 chr18 27149834 27150247 -59527301 - Tigger1 DNA MER2_type -1490 928 523 2065 89 34 7 chr18 27150362 27150653 -59526895 + AluSx SINE Alu 1 299 -13 1328 153 0 24 chr18 27150744 27150953 -59526595 - AluJb SINE Alu -22 290 87 1540 148 118 7 chr18 27150977 27151248 -59526300 - AluSg1 SINE Alu -3 306 6 22 0 0 0 chr18 27152381 27152403 -59525145 + AT_rich Low_complexity Low_complexity 1 22 0 1994 139 0 17 chr18 27152460 27152754 -59524794 - AluSx SINE Alu -22 290 2 294 207 156 67 chr18 27152774 27152909 -59524639 - L1MC4 LINE L1 -145 7897 7751 768 179 8 8 chr18 27152937 27153071 -59524477 - AluJo SINE Alu -178 134 1 191 68 102 169 chr18 27153782 27153841 -59523707 - MER5B DNA MER1_type -123 55 1 2319 86 6 6 chr18 27154119 27154432 -59523116 + AluSq SINE Alu 1 313 0 275 71 24 0 chr18 27155229 27155271 -59522277 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1321 181 0 13 chr18 27155273 27155500 -59522048 - AluJb SINE Alu -31 281 58 772 110 47 0 chr18 27155776 27155903 -59521645 - MER65A LTR ERV1 0 445 313 1420 158 0 42 chr18 27155903 27156163 -59521385 - AluJo SINE Alu -11 301 53 1681 160 27 50 chr18 27156164 27156501 -59521047 - MER65A LTR ERV1 -116 329 1 700 136 0 0 chr18 27157025 27157135 -59520413 - AluSg/x SINE Alu -8 302 193 2180 103 0 7 chr18 27157206 27157498 -59520050 + AluSx SINE Alu 14 303 -9 741 212 42 28 chr18 27157517 27157734 -59519814 + L1MC5 LINE L1 7694 7913 -48 2087 108 0 18 chr18 27158311 27158597 -59518951 - AluSx SINE Alu -31 281 1 2536 234 71 29 chr18 27159426 27160230 -59517318 - L1ME2 LINE L1 -9 6155 5318 224 213 40 0 chr18 27160273 27160348 -59517200 + (TA)n Simple_repeat Simple_repeat 1 78 0 227 213 25 8 chr18 27160368 27160490 -59517058 + (TA)n Simple_repeat Simple_repeat 1 124 0 860 230 44 7 chr18 27160597 27160853 -59516695 + L1M4 LINE L1 5014 5272 -874 33 73 0 0 chr18 27160853 27160921 -59516627 + AT_rich Low_complexity Low_complexity 1 68 0 377 247 146 59 chr18 27160990 27161103 -59516445 - HAL1b LINE L1 -644 704 602 1954 152 46 21 chr18 27161103 27161432 -59516116 - MER1B DNA MER1_type 0 337 1 377 247 146 59 chr18 27161432 27161557 -59515991 - HAL1b LINE L1 -746 602 445 207 0 0 0 chr18 27161759 27161782 -59515766 + (TG)n Simple_repeat Simple_repeat 2 24 0 2563 209 34 89 chr18 27162381 27162597 -59514951 - L1ME1 LINE L1 -55 6045 5819 2197 175 32 35 chr18 27162597 27162627 -59514921 - MER65C LTR ERV1 0 461 432 2064 113 27 7 chr18 27162627 27162920 -59514628 + AluSx SINE Alu 1 299 -13 2197 175 32 35 chr18 27162920 27163351 -59514197 - MER65C LTR ERV1 -29 432 1 2563 209 34 89 chr18 27163351 27163977 -59513571 - L1ME1 LINE L1 -281 5819 5249 2016 105 0 39 chr18 27163996 27164301 -59513247 - AluY SINE Alu -18 293 1 1663 174 0 45 chr18 27164303 27164614 -59512934 - AluJo SINE Alu -15 297 1 2453 84 3 0 chr18 27164621 27164929 -59512619 - AluSp SINE Alu -4 309 1 556 70 0 0 chr18 27164953 27165024 -59512524 - U3 snRNA snRNA -146 71 1 937 261 152 54 chr18 27165051 27165774 -59511774 - L1ME1 LINE L1 -2215 3865 3214 1664 156 67 25 chr18 27165774 27166057 -59511491 - AluJo SINE Alu -17 295 1 937 261 152 54 chr18 27166057 27166076 -59511472 - L1ME1 LINE L1 -2866 3214 3198 270 0 0 0 chr18 27166076 27166106 -59511442 + (TTA)n Simple_repeat Simple_repeat 1 30 0 937 261 152 54 chr18 27166106 27166704 -59510844 - L1ME1 LINE L1 -2882 3198 2392 337 319 6 38 chr18 27166737 27166894 -59510654 - L1ME1 LINE L1 -5840 230 79 1832 153 7 23 chr18 27167061 27167362 -59510186 - AluJo SINE Alu -16 296 1 388 271 71 6 chr18 27167967 27168137 -59509411 - L1M4 LINE L1 -948 5198 5018 21 0 0 0 chr18 27168137 27168158 -59509390 + AT_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr18 27168321 27168356 -59509192 + AT_rich Low_complexity Low_complexity 1 35 0 254 211 40 13 chr18 27168411 27168487 -59509061 + L1MEd LINE L1 895 972 -5147 353 277 43 11 chr18 27168493 27168587 -59508961 - L1MEd LINE L1 -5462 657 561 513 318 120 53 chr18 27168846 27169373 -59508175 - L1M4 LINE L1 -784 5362 4768 1840 110 4 0 chr18 27169373 27169643 -59507905 - AluSx SINE Alu 0 308 38 513 318 120 53 chr18 27169643 27169863 -59507685 - L1M4 LINE L1 -1378 4768 4564 196 375 0 12 chr18 27170067 27170147 -59507401 + L2 LINE L2 2878 2956 -357 300 200 40 53 chr18 27170471 27170546 -59507002 + L2 LINE L2 3231 3304 -9 2175 64 3 41 chr18 27170737 27171062 -59506486 - AluY SINE Alu 0 314 1 318 128 144 48 chr18 27171445 27171570 -59505978 + L1MC5 LINE L1 7625 7761 -200 1751 104 8 4 chr18 27171815 27172056 -59505492 + AluSq SINE Alu 15 256 -57 801 188 0 0 chr18 27172074 27172207 -59505341 + AluSg/x SINE Alu 128 260 -50 2222 102 3 26 chr18 27172564 27172877 -59504671 + AluSx SINE Alu 1 306 -6 325 289 44 69 chr18 27172968 27173127 -59504421 + MER5A DNA MER1_type 27 181 -8 876 222 53 83 chr18 27173127 27173524 -59504024 + Charlie1 DNA MER1_type 1818 2202 -559 25 0 0 0 chr18 27173796 27173821 -59503727 + AT_rich Low_complexity Low_complexity 1 25 0 255 312 8 64 chr18 27173922 27174047 -59503501 + AluSp/q SINE Alu 186 303 0 23 0 0 0 chr18 27174199 27174222 -59503326 + AT_rich Low_complexity Low_complexity 1 23 0 1279 174 51 86 chr18 27174326 27174699 -59502849 + Charlie1 DNA MER1_type 1843 2202 -559 335 140 140 70 chr18 27174695 27174866 -59502682 + Charlie1 DNA MER1_type 2475 2657 -104 * 342 305 51 73 chr18 27174867 27174972 -59502576 - MIR SINE MIR -79 183 82 2037 127 20 0 chr18 27174972 27175271 -59502277 - AluSx SINE Alu -7 305 1 342 305 51 73 chr18 27175271 27175342 -59502206 - MIR SINE MIR -180 82 11 398 317 0 91 chr18 27175346 27175554 -59501994 + MER5A DNA MER1_type 1 189 0 289 204 15 2 chr18 27176177 27176250 -59501298 - L1ME LINE L1 -350 5771 5697 2012 99 60 11 chr18 27176500 27176783 -59500765 + AluSx SINE Alu 1 297 -15 222 261 58 0 chr18 27176950 27177019 -59500529 - L2 LINE L2 -571 2743 2671 344 298 0 0 chr18 27178291 27178375 -59499173 - MIR3 SINE MIR -26 182 99 1646 192 0 7 chr18 27178818 27179115 -59498433 - AluJo SINE Alu -17 295 1 212 210 65 0 chr18 27179609 27179671 -59497877 + (TATATG)n Simple_repeat Simple_repeat 5 70 0 603 0 0 0 chr18 27180243 27180310 -59497238 + (TC)n Simple_repeat Simple_repeat 1 67 0 279 0 0 0 chr18 27180309 27180340 -59497208 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 24 0 0 0 chr18 27180705 27180729 -59496819 + AT_rich Low_complexity Low_complexity 1 24 0 1539 111 0 9 chr18 27181067 27181283 -59496265 + AluSq SINE Alu 1 214 -99 2007 136 19 13 chr18 27181521 27181831 -59495717 - AluSx SINE Alu 0 312 1 2377 86 0 3 chr18 27182173 27182477 -59495071 - AluSq SINE Alu -10 303 1 817 218 73 59 chr18 27182567 27182710 -59494838 - MER58A DNA MER1_type -2196 224 75 1291 226 90 17 chr18 27182710 27183055 -59494493 - MLT1A2 LTR MaLR 0 374 5 817 218 73 59 chr18 27183055 27183131 -59494417 - MER58A DNA MER1_type -2345 75 2 1456 176 0 8 chr18 27183189 27183427 -59494121 - AluJb SINE Alu -21 291 56 1790 163 0 0 chr18 27184069 27184346 -59493202 + AluJo SINE Alu 11 287 -25 2168 119 0 25 chr18 27184357 27184677 -59492871 + AluSx SINE Alu 1 312 0 2018 144 0 0 chr18 27184738 27185037 -59492511 - AluSq SINE Alu -14 299 1 546 248 64 76 chr18 27186733 27186983 -59490565 - L1MA9 LINE L1 -1 6290 6044 2856 230 46 7 chr18 27187622 27188484 -59489064 - L1M4 LINE L1 -2727 3655 2760 1197 145 0 86 chr18 27188490 27188724 -59488824 - AluJo SINE Alu -13 299 86 1159 191 136 18 chr18 27188744 27189297 -59488251 - L1M4 LINE L1 -3642 2740 2117 938 128 0 0 chr18 27189434 27189559 -59487989 - AluSq/x SINE Alu -187 125 1 21 0 0 0 chr18 27191061 27191082 -59486466 + AT_rich Low_complexity Low_complexity 1 21 0 1856 108 13 59 chr18 27192725 27193032 -59484516 - AluSx SINE Alu -19 293 1 2234 113 0 3 chr18 27193316 27193626 -59483922 + AluSc SINE Alu 1 309 0 468 182 55 0 chr18 27193646 27193756 -59483792 - L1MC4 LINE L1 -2 8040 7925 1934 123 20 3 chr18 27193763 27194063 -59483485 - AluSg SINE Alu -5 305 1 374 265 20 0 chr18 27194112 27194199 -59483349 + CT-rich Low_complexity Low_complexity 3 94 -12 1759 200 7 0 chr18 27194199 27194504 -59483044 - AluJo SINE Alu -5 307 1 374 265 20 0 chr18 27194504 27194518 -59483030 + CT-rich Low_complexity Low_complexity 94 106 0 956 248 93 16 chr18 27194575 27194897 -59482651 - L1MC4 LINE L1 -282 7760 7414 1322 177 5 0 chr18 27194950 27195165 -59482383 - AluJb SINE Alu -10 302 87 2633 242 75 23 chr18 27195166 27195985 -59481563 - L1MC4 LINE L1 -722 7320 6460 1290 301 108 22 chr18 27196558 27197187 -59480361 + L2 LINE L2 2231 2913 -401 1070 302 90 56 chr18 27197199 27197594 -59479954 + L2 LINE L2 2312 2692 -621 219 36 0 0 chr18 27197594 27197622 -59479926 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1070 302 90 56 chr18 27197622 27197674 -59479874 + L2 LINE L2 2692 2741 -572 2146 105 10 7 chr18 27197674 27197979 -59479569 - AluSq SINE Alu -7 306 1 1070 302 90 56 chr18 27197979 27198375 -59479173 + L2 LINE L2 2741 3182 -131 1019 151 0 0 chr18 27198377 27198529 -59479019 - AluSg/x SINE Alu -21 289 138 1578 194 7 20 chr18 27198537 27198836 -59478712 - AluJo SINE Alu -17 295 1 225 230 73 128 chr18 27198887 27199091 -59478457 + L2 LINE L2 3115 3307 -6 194 160 20 0 chr18 27199154 27199204 -59478344 + (TA)n Simple_repeat Simple_repeat 1 51 0 2393 100 3 0 chr18 27202560 27202870 -59474678 - AluSx SINE Alu -1 311 1 1905 146 0 17 chr18 27203313 27203601 -59473947 + AluSx SINE Alu 1 283 -29 265 325 0 43 chr18 27204414 27204531 -59473017 + MIR SINE MIR 58 169 -93 21 36 0 0 chr18 27205113 27205141 -59472407 + AT_rich Low_complexity Low_complexity 1 28 0 182 284 172 9 chr18 27205550 27205666 -59471882 + L2 LINE L2 3160 3294 -19 2465 60 3 0 chr18 27205744 27206043 -59471505 + AluY SINE Alu 3 302 -9 573 248 67 14 chr18 27206507 27206717 -59470831 - L1ME LINE L1 -297 5824 5604 867 181 0 47 chr18 27207167 27207360 -59470188 - AluJo SINE Alu -126 186 3 312 280 242 21 chr18 27207523 27207709 -59469839 - L1ME LINE L1 -543 5578 5352 486 253 82 16 chr18 27208167 27208361 -59469187 + MER3 DNA MER1_type 1 207 -2 795 206 82 0 chr18 27208441 27208635 -59468913 - L1MB2 LINE L1 -39 6132 5923 851 128 8 8 chr18 27208645 27208778 -59468770 - FLAM_C SINE Alu 0 133 1 2209 108 7 0 chr18 27208818 27209115 -59468433 + AluSx SINE Alu 1 299 -13 1658 133 34 34 chr18 27209124 27209417 -59468131 + AluSx SINE Alu 1 293 -19 1935 166 0 13 chr18 27209645 27209946 -59467602 - AluSx SINE Alu -12 300 4 1347 156 19 59 chr18 27209951 27210144 -59467404 - AluJb SINE Alu -1 311 133 1429 135 0 45 chr18 27210144 27210455 -59467093 + AluY SINE Alu 5 301 -10 1347 156 19 59 chr18 27210455 27210568 -59466980 - AluJb SINE Alu -179 133 17 192 438 0 0 chr18 27210570 27210634 -59466914 - L2 LINE L2 -27 3245 3182 325 220 55 0 chr18 27210667 27210758 -59466790 - HAL1b LINE L1 0 1348 1253 212 284 105 11 chr18 27210765 27210860 -59466688 + L3 LINE CR1 795 898 -679 337 330 174 11 chr18 27210956 27211307 -59466241 + L3 LINE CR1 1163 1570 -7 932 194 31 47 chr18 27212024 27212372 -59465176 - L1MEc LINE L1 -1614 4601 4295 1647 183 38 15 chr18 27212396 27212749 -59464799 + Tigger7 DNA MER2_type 37 2328 -159 803 143 27 0 chr18 27212776 27212923 -59464625 + Tigger7 DNA MER2_type 2311 2461 -30 3052 227 47 56 chr18 27212925 27213877 -59463671 - L1MEc LINE L1 -1917 4298 3356 2158 119 0 7 chr18 27213877 27214172 -59463376 - AluSx SINE Alu -19 293 1 3052 227 47 56 chr18 27214172 27214322 -59463226 - L1MEc LINE L1 -2859 3356 3206 23 54 0 0 chr18 27214711 27214748 -59462800 + AT_rich Low_complexity Low_complexity 1 37 0 1648 93 27 0 chr18 27215338 27215563 -59461985 + AluSq SINE Alu 69 299 -14 3210 222 86 26 chr18 27216411 27216830 -59460718 - L1MEc LINE L1 -2952 3263 2870 591 61 0 24 chr18 27216830 27216912 -59460636 + MADE1 DNA Mariner 1 80 0 3210 222 86 26 chr18 27216912 27217778 -59459770 - L1MEc LINE L1 -3345 2870 1935 417 39 0 0 chr18 27217778 27217829 -59459719 + (TG)n Simple_repeat Simple_repeat 2 52 0 3210 222 86 26 chr18 27217829 27217877 -59459671 - L1MEc LINE L1 -4280 1935 1891 2308 96 0 0 chr18 27217916 27218209 -59459339 + AluSc SINE Alu 1 293 -16 2386 92 3 0 chr18 27218653 27218958 -59458590 - AluSp SINE Alu -5 308 3 1610 189 3 3 chr18 27219507 27219809 -59457739 - AluJo SINE Alu -10 302 1 830 206 21 46 chr18 27220728 27220922 -59456626 - MER5A DNA MER1_type 0 189 1 209 336 118 9 chr18 27221286 27221396 -59456152 + MIR SINE MIR 19 140 -68 307 346 46 0 chr18 27223148 27223278 -59454270 + L1MDa LINE L1 472 607 -5923 392 301 42 23 chr18 27223608 27223805 -59453743 + L1MDa LINE L1 855 1053 -5477 1298 204 9 0 chr18 27223817 27224037 -59453511 - MER8 DNA MER2_type -17 222 1 968 224 54 30 chr18 27224041 27224376 -59453172 + L1MDa LINE L1 1067 1409 -5134 760 208 109 113 chr18 27224373 27224869 -59452679 + L1MDa LINE L1 1660 2153 -4387 * 3689 216 58 14 chr18 27224877 27226140 -59451408 + L1M2c LINE L1 4 1832 -4957 918 198 0 23 chr18 27226141 27226318 -59451230 - FRAM SINE Alu -6 170 1 4329 204 41 25 chr18 27226319 27226922 -59450626 + L1M2c LINE L1 1801 2393 -4395 1074 144 0 0 chr18 27226922 27227102 -59450446 + (TA)n Simple_repeat Simple_repeat 1 180 0 2307 81 7 0 chr18 27227107 27227402 -59450146 - AluY SINE Alu -14 297 1 4329 204 41 25 chr18 27227402 27228511 -59449037 + L1M2c LINE L1 2396 3548 -3240 1034 165 5 25 chr18 27229289 27229489 -59448059 - L1PA16 LINE L1 -10 6156 5961 5400 169 42 22 chr18 27229548 27229627 -59447921 + L1MA5A LINE L1 4316 4392 -1905 252 0 0 0 chr18 27229627 27229655 -59447893 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5400 169 42 22 chr18 27229655 27230572 -59446976 + L1MA5A LINE L1 4392 5290 -1007 1468 217 6 25 chr18 27230572 27230886 -59446662 + AluJo SINE Alu 1 308 -4 5400 169 42 22 chr18 27230886 27231811 -59445737 + L1MA5A LINE L1 5290 6280 -17 1002 234 82 22 chr18 27232036 27232506 -59445042 + L1MDa LINE L1 2192 2685 -3855 436 274 156 8 chr18 27232504 27232741 -59444807 + L1M2c LINE L1 3657 3928 -2860 * 458 180 45 63 chr18 27232741 27232852 -59444696 - AluSg/x SINE Alu -41 271 163 * 544 187 0 0 chr18 27232847 27232938 -59444610 + AluJb SINE Alu 192 282 -30 1889 239 37 93 chr18 27232960 27233631 -59443917 + L1M2c LINE L1 3984 4593 -2195 781 127 0 8 chr18 27233631 27233749 -59443799 + FLAM_C SINE Alu 1 117 -16 1889 239 37 93 chr18 27233749 27233979 -59443569 + L1M2c LINE L1 4593 4834 -1954 892 203 93 38 chr18 27233975 27234265 -59443283 - L1M4 LINE L1 -936 5210 4905 * 1936 132 14 0 chr18 27234265 27234554 -59442994 - AluSx SINE Alu -19 293 1 1229 155 147 0 chr18 27234613 27234845 -59442703 - MER67A LTR ERV1 -277 266 1 1667 264 60 33 chr18 27234845 27235512 -59442036 - L1M4 LINE L1 -1254 4892 4208 1853 147 102 6 chr18 27236202 27236535 -59441013 - MLT1A1 LTR MaLR 0 365 1 265 325 0 43 chr18 27237284 27237401 -59440147 + MIR SINE MIR 58 169 -93 21 36 0 0 chr18 27237983 27238011 -59439537 + AT_rich Low_complexity Low_complexity 1 28 0 182 284 172 9 chr18 27238420 27238536 -59439012 + L2 LINE L2 3160 3294 -19 2491 63 0 0 chr18 27238611 27238913 -59438635 + AluY SINE Alu 1 302 -9 573 248 67 14 chr18 27239379 27239589 -59437959 - L1ME LINE L1 -297 5824 5604 1568 170 25 11 chr18 27239922 27240198 -59437350 - AluJb SINE Alu -30 282 3 325 279 216 15 chr18 27240344 27240548 -59437000 - L1ME LINE L1 -2213 5595 5351 691 225 107 0 chr18 27241005 27241192 -59436356 + MER3 DNA MER1_type 1 207 -2 950 170 82 0 chr18 27241270 27241464 -59436084 - L1MB2 LINE L1 -39 6132 5923 855 128 8 8 chr18 27241473 27241606 -59435942 - FLAM_C SINE Alu 0 133 1 2298 103 3 0 chr18 27241646 27241948 -59435600 + AluSx SINE Alu 1 303 -9 524 285 145 14 chr18 27242289 27242503 -59435045 + MIR SINE MIR 8 249 -13 1227 207 63 35 chr18 27242975 27243294 -59434254 - MER2 DNA MER2_type -1 344 17 529 202 10 0 chr18 27243411 27243515 -59434033 - MLT1B LTR MaLR -285 105 1 742 266 66 90 chr18 27243657 27243992 -59433556 + L3 LINE CR1 514 840 -737 227 228 291 0 chr18 27244024 27244103 -59433445 - MER5A DNA MER1_type -7 182 81 1343 161 114 61 chr18 27244103 27244248 -59433300 + AluJb SINE Alu 1 137 -175 2010 141 3 13 chr18 27244248 27244561 -59432987 + AluSx SINE Alu 1 310 -2 1343 161 114 61 chr18 27244561 27244695 -59432853 + AluJb SINE Alu 137 295 -17 373 234 16 8 chr18 27244697 27244828 -59432720 + L1MC4 LINE L1 2006 6983 -1339 225 174 0 0 chr18 27244790 27244836 -59432712 - LTR66 LTR ERVL -171 439 394 * 237 65 0 0 chr18 27244828 27244859 -59432689 + (CA)n Simple_repeat Simple_repeat 2 32 0 1191 133 0 0 chr18 27244866 27245031 -59432517 + AluSg/x SINE Alu 132 296 -16 410 205 13 0 chr18 27245031 27245109 -59432439 - MER5A DNA MER1_type -97 92 14 378 351 49 38 chr18 27245191 27245456 -59432092 + L3 LINE CR1 1028 1295 -282 352 358 53 20 chr18 27245474 27245625 -59431923 + MIR SINE MIR 2 157 -105 813 249 97 50 chr18 27245680 27245878 -59431670 - MLT1J2 LTR MaLR -49 401 214 1921 166 3 0 chr18 27245878 27246174 -59431374 + AluJb SINE Alu 3 299 -13 813 249 97 50 chr18 27246174 27246357 -59431191 - MLT1J2 LTR MaLR -236 214 2 300 216 41 62 chr18 27246363 27246460 -59431088 + MIR SINE MIR 164 258 -4 258 271 129 12 chr18 27246582 27246667 -59430881 + L3 LINE CR1 1447 1541 -36 1128 187 128 75 chr18 27248135 27248574 -59428974 + MLT1C LTR MaLR 6 467 0 358 180 271 0 chr18 27249331 27249453 -59428095 + L1ME4a LINE L1 5966 6120 -1 2342 98 0 0 chr18 27250706 27251001 -59426547 + AluSx SINE Alu 1 295 -17 1394 234 140 10 chr18 27251148 27251648 -59425900 + L1ME3A LINE L1 5598 6162 -8 216 158 0 0 chr18 27252356 27252394 -59425154 + A-rich Low_complexity Low_complexity 1 38 0 220 243 14 54 chr18 27253105 27253179 -59424369 - L2 LINE L2 -21 3251 3181 522 198 0 0 chr18 27253204 27253300 -59424248 + MIR SINE MIR 96 191 -71 457 310 211 25 chr18 27254435 27254990 -59422558 + L2 LINE L2 2210 2867 -447 921 171 6 6 chr18 27255382 27255558 -59421990 + AluJb SINE Alu 128 303 -9 2360 108 0 0 chr18 27256992 27257299 -59420249 - AluSx SINE Alu -5 307 1 1933 154 3 3 chr18 27257777 27258082 -59419466 - AluSx SINE Alu -7 305 1 204 162 0 0 chr18 27258179 27258216 -59419332 + L3b LINE CR1 1355 1391 -192 729 123 9 0 chr18 27258293 27258399 -59419149 - U6 snRNA snRNA 0 107 1 192 345 0 0 chr18 27258516 27258571 -59418977 + L3b LINE CR1 1475 1529 -54 345 191 0 48 chr18 27258726 27258810 -59418738 - MER116 DNA Mariner 0 80 1 449 310 56 0 chr18 27258874 27259016 -59418532 - MIR SINE MIR -50 212 63 2358 192 30 48 chr18 27259186 27259687 -59417861 - MLT2B3 LTR ERVL -62 492 1 284 262 201 22 chr18 27259719 27259948 -59417600 - L1ME LINE L1 -370 5751 5482 582 322 112 13 chr18 27261092 27261396 -59416152 + HAL1 LINE L1 813 1146 -1361 556 273 142 11 chr18 27261420 27261695 -59415853 + MLT2F LTR ERVL 1 311 -352 287 370 7 7 chr18 27261854 27261992 -59415556 + ERVL LTR ERVL 23 160 -5604 628 266 42 8 chr18 27262091 27262635 -59414913 + ERVL LTR ERVL 286 945 -4750 847 288 26 23 chr18 27262673 27263024 -59414524 + ERVL LTR ERVL 1032 1383 -4381 2662 279 80 13 chr18 27263373 27264681 -59412867 + ERVL LTR ERVL 1385 2842 -2922 2311 63 31 0 chr18 27264681 27264968 -59412580 + AluY SINE Alu 1 296 -15 2662 279 80 13 chr18 27264968 27265191 -59412357 + ERVL LTR ERVL 2842 3049 -2715 36 82 0 0 chr18 27265435 27265520 -59412028 + AT_rich Low_complexity Low_complexity 1 85 0 295 216 78 20 chr18 27265539 27265641 -59411907 - L1ME LINE L1 -538 5583 5476 195 42 0 0 chr18 27265753 27265777 -59411771 + (TTCA)n Simple_repeat Simple_repeat 2 25 0 6312 196 46 17 chr18 27266908 27269340 -59408208 - L1MB7 LINE L1 -16 6168 3476 1751 204 131 26 chr18 27270580 27271152 -59406396 - L1ME2 LINE L1 -2 6231 5600 * 3179 217 69 18 chr18 27271148 27272238 -59405310 - L1ME2 LINE L1 -942 5273 4129 724 214 202 4 chr18 27272272 27272539 -59405009 - L1ME2 LINE L1 -3127 3088 2769 722 235 74 99 chr18 27272535 27273021 -59404527 - L1ME2 LINE L1 -3711 2504 2008 * 1980 143 0 0 chr18 27273021 27273307 -59404241 - AluJb SINE Alu -26 286 1 722 235 74 99 chr18 27273307 27273437 -59404111 - L1ME2 LINE L1 -4207 2008 1876 2260 75 7 0 chr18 27273437 27273763 -59403785 + AluSp SINE Alu 1 328 0 722 235 74 99 chr18 27273763 27273992 -59403556 - L1ME2 LINE L1 -4339 1876 1726 457 310 211 25 chr18 27275077 27275632 -59401916 - L2 LINE L2 -447 2867 2210 522 198 0 0 chr18 27276767 27276863 -59400685 - MIR SINE MIR -71 191 96 220 243 14 54 chr18 27276888 27276962 -59400586 + L2 LINE L2 3181 3251 -21 231 114 0 0 chr18 27277673 27277708 -59399840 + (TTC)n Simple_repeat Simple_repeat 2 36 0 1394 234 140 10 chr18 27278416 27278916 -59398632 - L1ME3A LINE L1 -8 6162 5598 1650 157 0 12 chr18 27279063 27279318 -59398230 - AluSx SINE Alu -17 295 44 282 301 115 18 chr18 27280374 27280487 -59397061 - L2 LINE L2 -3 3269 3146 478 276 41 72 chr18 27280757 27280798 -59396750 + MIR SINE MIR 1 42 -220 2360 95 13 0 chr18 27280798 27281104 -59396444 - AluSx SINE Alu -2 310 1 478 276 41 72 chr18 27281104 27281283 -59396265 + MIR SINE MIR 42 214 -48 514 226 8 0 chr18 27281385 27281509 -59396039 - L1MA10 LINE L1 -24 6310 6186 202 316 22 44 chr18 27281523 27281659 -59395889 - L2 LINE L2 -610 2704 2572 187 329 68 0 chr18 27281688 27281761 -59395787 + L2 LINE L2 3209 3286 -27 24 0 0 0 chr18 27283651 27283675 -59393873 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr18 27283950 27283987 -59393561 + AT_rich Low_complexity Low_complexity 1 37 0 352 291 26 17 chr18 27284138 27284255 -59393293 + Charlie8 DNA MER1_type 113 230 -2187 1800 129 18 4 chr18 27284345 27284617 -59392931 + AluJo SINE Alu 16 291 -21 2093 128 0 3 chr18 27284620 27284909 -59392639 + AluSg SINE Alu 1 288 -22 204 40 0 0 chr18 27284910 27284935 -59392613 + (TG)n Simple_repeat Simple_repeat 2 26 0 1641 171 7 7 chr18 27285124 27285398 -59392150 - AluJo SINE Alu -34 278 5 2419 97 3 0 chr18 27285410 27285759 -59391789 - AluSx SINE Alu 0 350 1 478 270 86 0 chr18 27286770 27286922 -59390626 + MIR SINE MIR 47 211 -51 213 250 0 21 chr18 27286894 27286942 -59390606 - MIR SINE MIR -18 244 198 * 1379 118 70 41 chr18 27286974 27287244 -59390304 - Tigger3(Golem) DNA MER2_type 0 3038 2761 2398 93 0 0 chr18 27287328 27287630 -59389918 - AluSx SINE Alu -10 302 1 358 180 271 0 chr18 27288884 27289006 -59388542 - L1ME4a LINE L1 -1 6120 5966 1134 192 126 71 chr18 27289763 27290201 -59387347 - MLT1C LTR MaLR 0 467 6 258 271 129 12 chr18 27291669 27291754 -59385794 - L3 LINE CR1 -36 1541 1447 300 216 41 62 chr18 27291876 27291973 -59385575 - MIR SINE MIR -4 258 164 813 249 97 50 chr18 27291979 27292162 -59385386 + MLT1J2 LTR MaLR 2 175 -275 1921 166 3 0 chr18 27292162 27292458 -59385090 - AluJb SINE Alu -13 299 3 813 249 97 50 chr18 27292458 27292656 -59384892 + MLT1J2 LTR MaLR 175 401 -49 352 358 53 20 chr18 27292711 27292862 -59384686 - MIR SINE MIR -105 157 2 366 355 49 38 chr18 27292880 27293145 -59384403 - L3 LINE CR1 -282 1295 1028 410 205 13 0 chr18 27293227 27293305 -59384243 + MER5A DNA MER1_type 14 92 -97 1222 139 0 0 chr18 27293305 27293477 -59384071 - AluSg/x SINE Alu -16 296 125 255 61 0 0 chr18 27293478 27293511 -59384037 + (TG)n Simple_repeat Simple_repeat 2 34 0 575 134 75 75 chr18 27293630 27293764 -59383784 + Tigger3(Golem) DNA MER2_type 2905 3038 0 213 250 0 21 chr18 27293796 27293844 -59383704 + MIR SINE MIR 198 244 -18 * 478 270 86 0 chr18 27293816 27293968 -59383580 - MIR SINE MIR -51 211 47 2228 111 0 0 chr18 27294979 27295268 -59382280 + AluSx SINE Alu 1 289 -23 28 0 0 0 chr18 27295270 27295298 -59382250 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr18 27295458 27295485 -59382063 + (GA)n Simple_repeat Simple_repeat 2 28 0 2133 93 3 51 chr18 27295996 27296308 -59381240 + AluSx SINE Alu 1 297 -15 439 103 0 0 chr18 27297303 27297361 -59380187 + AluSg/x SINE Alu 190 247 -65 242 29 29 0 chr18 27297367 27297402 -59380146 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 186 173 58 77 chr18 27297576 27297628 -59379920 - L2 LINE L2 -1 3312 3262 2231 127 3 0 chr18 27298102 27298402 -59379146 - AluSq SINE Alu -12 301 1 21 0 0 0 chr18 27298453 27298474 -59379074 + AT_rich Low_complexity Low_complexity 1 21 0 223 294 28 55 chr18 27298497 27298606 -59378942 - L2 LINE L2 -219 3053 2948 288 220 66 44 chr18 27298723 27298814 -59378734 - MIR SINE MIR -98 110 18 189 327 0 0 chr18 27298859 27298911 -59378637 - L2 LINE L2 -104 3168 3117 238 312 80 32 chr18 27298911 27299036 -59378512 - L2 LINE L2 -4 3309 3179 658 242 199 5 chr18 27299187 27299398 -59378150 - MIR SINE MIR -8 254 3 192 271 136 40 chr18 27299410 27299587 -59377961 - L2 LINE L2 -188 3084 2891 1791 165 76 22 chr18 27300013 27300383 -59377165 + MLT1B LTR MaLR 1 390 0 1389 160 38 100 chr18 27300448 27300767 -59376781 + AluJb SINE Alu 1 299 -13 523 263 179 50 chr18 27301854 27302211 -59375337 - L1MC4a LINE L1 -1906 5902 5500 771 253 6 6 chr18 27302425 27302603 -59374945 + MER5B DNA MER1_type 1 178 0 333 132 0 0 chr18 27302927 27302980 -59374568 - MER5B DNA MER1_type -123 55 3 480 198 87 0 chr18 27303468 27303594 -59373954 + MER5A DNA MER1_type 3 139 -50 6618 71 47 26 chr18 27303605 27304059 -59373489 - L1MA2 LINE L1 0 6304 5861 2477 78 0 7 chr18 27304059 27304368 -59373180 - AluSc SINE Alu -2 307 1 6618 71 47 26 chr18 27304368 27304856 -59372692 - L1MA2 LINE L1 -443 5861 5343 227 286 0 0 chr18 27304864 27304920 -59372628 + MER5A DNA MER1_type 134 189 0 495 243 43 81 chr18 27305348 27305533 -59372015 + MER5A DNA MER1_type 1 178 -11 282 282 159 35 chr18 27306166 27306384 -59371164 + MIR SINE MIR 15 254 -8 317 200 0 0 chr18 27306418 27306478 -59371070 + L1ME4a LINE L1 6061 6120 -1 376 209 38 29 chr18 27307449 27307554 -59369994 - L1ME LINE L1 -460 5661 5556 924 90 0 0 chr18 27307558 27307680 -59369868 - AluSp/q SINE Alu -4 309 188 327 143 40 48 chr18 27308728 27308854 -59368694 + CT-rich Low_complexity Low_complexity 4 128 0 461 161 28 44 chr18 27308872 27309052 -59368496 + CT-rich Low_complexity Low_complexity 3 179 0 188 234 202 11 chr18 27309075 27309169 -59368379 + MIR SINE MIR 3 114 -148 632 233 131 24 chr18 27309273 27309479 -59368069 - MIR SINE MIR -31 231 4 246 193 34 227 chr18 27309524 27309643 -59367905 - L2 LINE L2 -17 3296 3201 1597 156 4 19 chr18 27309761 27310031 -59367517 + AluJb SINE Alu 47 312 0 399 21 0 0 chr18 27312404 27312452 -59365096 + (TG)n Simple_repeat Simple_repeat 2 49 0 31 58 0 0 chr18 27313946 27313998 -59363550 + GC_rich Low_complexity Low_complexity 1 52 0 30 45 0 0 chr18 27314562 27314606 -59362942 + GC_rich Low_complexity Low_complexity 1 44 0 462 135 0 48 chr18 27314635 27314761 -59362787 + (GGA)n Simple_repeat Simple_repeat 2 121 0 25 31 0 0 chr18 27314892 27314924 -59362624 + GC_rich Low_complexity Low_complexity 1 32 0 187 283 17 33 chr18 27316988 27317048 -59360500 - L2 LINE L2 -95 3177 3119 218 200 0 18 chr18 27317070 27317125 -59360423 + MIR SINE MIR 81 134 -74 2705 126 41 14 chr18 27322095 27322533 -59355015 - Tigger2 DNA MER2_type 0 2718 2269 447 159 0 0 chr18 27322519 27322588 -59354960 - Tigger2 DNA MER2_type -2649 69 1 * 304 226 60 12 chr18 27323535 27323619 -59353929 + MER5A DNA MER1_type 17 104 -85 488 305 11 23 chr18 27323690 27323867 -59353681 - MIR SINE MIR -70 192 18 423 254 259 0 chr18 27324149 27324354 -59353194 + MIR SINE MIR 5 262 0 2513 79 0 0 chr18 27324742 27325045 -59352503 - AluSq SINE Alu -10 303 1 181 182 0 0 chr18 27326252 27326285 -59351263 - MIR SINE MIR -10 252 220 215 156 0 22 chr18 27327141 27327186 -59350362 - MIR SINE MIR -99 163 120 189 0 0 0 chr18 27329161 27329182 -59348366 + (T)n Simple_repeat Simple_repeat 1 21 0 1786 146 4 4 chr18 27329210 27329478 -59348070 + AluJb SINE Alu 1 268 -44 246 268 28 0 chr18 27329948 27330019 -59347529 - MIR SINE MIR -91 117 45 339 303 115 8 chr18 27330026 27330148 -59347400 - L2 LINE L2 0 3272 3138 2018 134 23 3 chr18 27330446 27330751 -59346797 + AluJo SINE Alu 1 311 -1 181 313 0 0 chr18 27331312 27331360 -59346188 + L3 LINE CR1 1530 1577 0 817 125 8 16 chr18 27331654 27331795 -59345753 - FLAM_C SINE Alu 0 144 5 355 305 34 8 chr18 27331932 27332050 -59345498 + L2 LINE L2 3192 3312 -1 195 244 0 0 chr18 27332230 27332271 -59345277 - L2 LINE L2 -15 3298 3258 573 336 136 11 chr18 27333904 27334478 -59343070 - L2 LINE L2 -958 2356 1711 1756 186 18 3 chr18 27335185 27335518 -59342030 - L1MC1 LINE L1 -16 6317 5980 248 267 69 20 chr18 27336977 27337078 -59340470 - L2 LINE L2 -20 3293 3188 818 250 0 0 chr18 27337124 27337284 -59340264 + FRAM SINE Alu 1 160 -6 22 0 0 0 chr18 27338153 27338175 -59339373 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr18 27339342 27339372 -59338176 + AT_rich Low_complexity Low_complexity 1 30 0 719 211 0 0 chr18 27339372 27339505 -59338043 - FLAM_A SINE Alu 0 133 1 244 264 27 73 chr18 27339515 27339625 -59337923 - MIR SINE MIR -46 216 112 266 206 175 0 chr18 27339774 27339837 -59337711 - MER103 DNA DNA -86 80 7 22 56 0 0 chr18 27339951 27339987 -59337561 + AT_rich Low_complexity Low_complexity 1 36 0 529 258 42 27 chr18 27340090 27340295 -59337253 + MIR SINE MIR 55 262 0 2713 163 13 9 chr18 27340451 27340916 -59336632 - MLT1C LTR MaLR 0 467 1 379 238 113 20 chr18 27341019 27341036 -59336512 - L1MA10 LINE L1 0 6334 6318 935 217 72 65 chr18 27341036 27341312 -59336236 - L1ME2 LINE L1 -9 6155 5878 199 278 113 17 chr18 27341438 27341553 -59335995 - MIR SINE MIR -10 252 127 266 306 24 0 chr18 27341692 27341777 -59335771 + MIR SINE MIR 164 250 -12 200 269 172 11 chr18 27342780 27342873 -59334675 + MIR3 SINE MIR 85 192 -16 881 136 0 0 chr18 27344172 27344290 -59333258 + FLAM_C SINE Alu 6 123 -20 1698 93 5 0 chr18 27344446 27344660 -59332888 + AluSg SINE Alu 1 215 -95 353 67 0 0 chr18 27344661 27344706 -59332842 + AluSg SINE Alu 250 294 -7 282 286 57 19 chr18 27344876 27344981 -59332567 - L2 LINE L2 -8 3305 3197 2290 103 43 57 chr18 27345141 27345326 -59332222 - THE1B LTR MaLR 0 364 185 2484 90 0 3 chr18 27345326 27345636 -59331912 - AluSp SINE Alu -4 309 1 2290 103 43 57 chr18 27345636 27345819 -59331729 - THE1B LTR MaLR -179 185 1 201 293 0 57 chr18 27346806 27346912 -59330636 + CT-rich Low_complexity Low_complexity 3 102 0 2312 84 7 14 chr18 27347211 27347507 -59330041 + AluSx SINE Alu 12 305 -7 1722 200 10 0 chr18 27348434 27348739 -59328809 - AluJo SINE Alu -4 308 1 421 313 33 0 chr18 27349280 27349430 -59328118 - MIR3 SINE MIR -1 207 53 2554 47 0 0 chr18 27349623 27349919 -59327629 + AluY SINE Alu 1 296 -15 1975 145 7 0 chr18 27350022 27350311 -59327237 - AluSx SINE Alu -21 291 1 22 0 0 0 chr18 27350543 27350565 -59326983 + AT_rich Low_complexity Low_complexity 1 22 0 2150 123 3 0 chr18 27350607 27350900 -59326648 + AluSx SINE Alu 1 294 -18 193 289 66 13 chr18 27351328 27351404 -59326144 + MIR SINE MIR 72 151 -111 246 272 26 35 chr18 27351992 27352106 -59325442 - L1ME4a LINE L1 -65 6056 5944 256 311 93 42 chr18 27353008 27353201 -59324347 - MIR SINE MIR -29 233 31 652 117 109 0 chr18 27353479 27353607 -59323941 + L1MA5 LINE L1 6159 6300 0 26 30 0 0 chr18 27353607 27353640 -59323908 + AT_rich Low_complexity Low_complexity 1 33 0 196 269 0 0 chr18 27353930 27353982 -59323566 + L2 LINE L2 3261 3312 -1 180 0 0 0 chr18 27354280 27354300 -59323248 + (GA)n Simple_repeat Simple_repeat 1 20 0 489 240 186 6 chr18 27355077 27355260 -59322288 - L1ME2 LINE L1 -77 6087 5872 1270 181 0 28 chr18 27355391 27355639 -59321909 + AluJo SINE Alu 59 299 -13 783 163 91 91 chr18 27355763 27355821 -59321727 - MER3 DNA MER1_type 0 209 152 2331 78 3 0 chr18 27355821 27356126 -59321422 - AluSq SINE Alu 0 306 1 783 163 91 91 chr18 27356126 27356275 -59321273 - MER3 DNA MER1_type -56 153 1 288 288 47 90 chr18 27356592 27356825 -59320723 + L2 LINE L2 3034 3256 -16 1962 131 0 24 chr18 27356828 27357142 -59320406 + AluSx SINE Alu 1 307 0 1888 160 7 14 chr18 27357153 27357446 -59320102 + AluJo SINE Alu 3 293 -19 598 278 79 4 chr18 27357899 27358126 -59319422 - MLT1L LTR MaLR -26 589 346 1677 137 0 97 chr18 27358340 27358479 -59319069 + AluJo SINE Alu 4 96 -216 1779 134 40 7 chr18 27358479 27358755 -59318793 + AluJb SINE Alu 1 285 -27 1677 137 0 97 chr18 27358755 27358936 -59318612 + AluJo SINE Alu 96 293 -19 219 88 0 0 chr18 27359482 27359516 -59318032 + (TG)n Simple_repeat Simple_repeat 2 35 0 888 178 0 0 chr18 27360519 27360661 -59316887 + AluJb SINE Alu 3 145 -164 2627 44 0 0 chr18 27360661 27360958 -59316590 + AluY SINE Alu 1 297 -14 1620 193 3 13 chr18 27362564 27362875 -59314673 - AluJo SINE Alu -4 308 1 900 146 0 15 chr18 27362875 27363012 -59314536 - AluJo SINE Alu -177 135 1 1394 164 84 0 chr18 27364292 27364591 -59312957 + MER33 DNA MER1_type 1 324 0 319 177 51 0 chr18 27365972 27366051 -59311497 + MER5B DNA MER1_type 19 101 -77 249 33 0 0 chr18 27366239 27366269 -59311279 + (TG)n Simple_repeat Simple_repeat 1 30 0 730 197 0 8 chr18 27366701 27366833 -59310715 + MER115 DNA AcHobo 563 693 0 1371 125 5 0 chr18 27368551 27368751 -59308797 + AluJb SINE Alu 104 304 -8 396 0 0 0 chr18 27368788 27368832 -59308716 + (T)n Simple_repeat Simple_repeat 1 44 0 28 0 0 0 chr18 27369461 27369489 -59308059 + AT_rich Low_complexity Low_complexity 1 28 0 2607 134 41 16 chr18 27374968 27375407 -59302141 - Tigger2 DNA MER2_type 0 2718 2269 447 159 0 0 chr18 27375393 27375462 -59302086 - Tigger2 DNA MER2_type -2649 69 1 * 304 226 60 12 chr18 27376411 27376495 -59301053 + MER5A DNA MER1_type 17 104 -85 466 311 11 23 chr18 27376566 27376743 -59300805 - MIR SINE MIR -70 192 18 423 254 259 0 chr18 27377030 27377235 -59300313 + MIR SINE MIR 5 262 0 2478 79 0 3 chr18 27377624 27377928 -59299620 - AluSq SINE Alu -10 303 1 1107 94 88 6 chr18 27378168 27378338 -59299210 + L1PBa LINE L1 2203 2386 -4477 567 272 92 0 chr18 27378667 27378851 -59298697 + L1MC4a LINE L1 7173 7373 -435 714 263 143 0 chr18 27378853 27379112 -59298436 + MER102b DNA MER1_type 38 333 -8 393 301 51 6 chr18 27379953 27380109 -59297439 + MIR SINE MIR 100 262 0 2182 96 7 4 chr18 27380300 27380581 -59296967 - AluSc SINE Alu -27 282 1 1482 253 89 36 chr18 27380595 27381156 -59296392 + L1MC4 LINE L1 7161 7751 -291 1783 124 43 4 chr18 27381187 27381294 -59296254 + AluSx SINE Alu 17 118 -189 270 0 0 0 chr18 27381294 27381324 -59296224 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1783 124 43 4 chr18 27381324 27381497 -59296051 + AluSx SINE Alu 118 307 0 528 247 59 55 chr18 27382514 27382733 -59294815 + MLT1H1 LTR MaLR 1 220 -335 301 207 88 14 chr18 27382817 27382935 -59294613 + MLT1G1 LTR MaLR 265 595 0 205 211 0 0 chr18 27383533 27383571 -59293977 + A-rich Low_complexity Low_complexity 1 38 0 28 0 0 0 chr18 27383744 27383772 -59293776 + AT_rich Low_complexity Low_complexity 1 28 0 217 270 297 9 chr18 27384373 27384484 -59293064 - MIR SINE MIR -118 144 2 207 286 0 16 chr18 27386722 27386785 -59290763 + MIR SINE MIR 114 175 -87 535 254 168 75 chr18 27386856 27387387 -59290161 + L2 LINE L2 2353 2932 -382 713 149 0 0 chr18 27387502 27387609 -59289939 - FLAM_A SINE Alu -35 107 1 234 0 0 0 chr18 27388305 27388331 -59289217 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 455 240 72 5 chr18 27388365 27388494 -59289054 - MIR SINE MIR -35 227 91 1252 76 0 13 chr18 27390055 27390212 -59287336 + AluSq SINE Alu 1 155 -158 202 298 35 0 chr18 27390317 27390374 -59287174 - L3 LINE CR1 -1276 301 243 1477 145 153 0 chr18 27391395 27391657 -59285891 + AluJo SINE Alu 1 302 0 2317 102 0 0 chr18 27391763 27392058 -59285490 - AluSq SINE Alu -18 295 1 2404 165 83 0 chr18 27392299 27392730 -59284818 - MLT1D LTR MaLR 0 505 39 2175 110 7 0 chr18 27393314 27393605 -59283943 - AluSq SINE Alu -20 293 1 228 189 19 19 chr18 27394405 27394458 -59283090 + MLT1K LTR MaLR 194 246 -342 983 190 38 0 chr18 27394663 27394847 -59282701 + MER20 DNA MER1_type 4 194 -25 320 298 64 6 chr18 27394979 27395150 -59282398 + L1MC5 LINE L1 7261 7441 -520 365 267 34 7 chr18 27395278 27395424 -59282124 + L1ME4a LINE L1 5961 6110 -11 1742 153 11 11 chr18 27395465 27395747 -59281801 + AluJo SINE Alu 9 290 -22 2220 111 3 0 chr18 27395755 27396043 -59281505 + AluSx SINE Alu 1 289 -23 28 0 0 0 chr18 27396045 27396073 -59281475 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr18 27396233 27396260 -59281288 + (GA)n Simple_repeat Simple_repeat 2 28 0 2133 93 3 51 chr18 27396771 27397083 -59280465 + AluSx SINE Alu 1 297 -15 439 103 0 0 chr18 27398077 27398135 -59279413 + AluSc SINE Alu 188 245 -64 242 29 29 0 chr18 27398141 27398176 -59279372 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 186 173 58 77 chr18 27398350 27398402 -59279146 - L2 LINE L2 -1 3312 3262 599 288 99 32 chr18 27398542 27398914 -59278634 + MLT1L LTR MaLR 217 613 -2 1897 150 114 6 chr18 27399243 27399689 -59277859 + LTR64 LTR ERVK 1 558 0 1138 189 65 12 chr18 27399768 27400016 -59277532 + L1MD1 LINE L1 5977 6237 -5 546 311 39 70 chr18 27400016 27400456 -59277092 - L2 LINE L2 -610 2704 2279 28 29 0 0 chr18 27400621 27400656 -59276892 + AT_rich Low_complexity Low_complexity 1 35 0 2756 59 25 3 chr18 27401431 27401824 -59275724 + L1PA10 LINE L1 5792 6168 0 312 296 75 39 chr18 27402245 27402580 -59274968 - L1ME4a LINE L1 -119 6002 5656 702 312 107 47 chr18 27402585 27403789 -59273759 - L1ME4a LINE L1 -749 5397 4291 2372 97 0 3 chr18 27403789 27404099 -59273449 + AluSq SINE Alu 1 309 -4 702 312 107 47 chr18 27404099 27404500 -59273048 - L1ME4a LINE L1 -1855 4291 3915 25 31 0 0 chr18 27405362 27405394 -59272154 + AT_rich Low_complexity Low_complexity 1 32 0 269 252 140 19 chr18 27406479 27406586 -59270962 - MIR SINE MIR -112 150 31 207 0 0 0 chr18 27408261 27408284 -59269264 + (T)n Simple_repeat Simple_repeat 1 23 0 726 195 9 68 chr18 27408377 27408598 -59268950 - L1MC5 LINE L1 -30 7931 7724 2247 104 3 0 chr18 27408714 27409001 -59268547 + AluSg SINE Alu 5 292 -18 244 313 62 0 chr18 27409354 27409418 -59268130 - L2 LINE L2 -47 3266 3199 718 195 63 40 chr18 27409955 27410129 -59267419 - MER5B DNA MER1_type 0 178 1 197 368 72 0 chr18 27410219 27410344 -59267204 - MIR3 SINE MIR -25 183 50 2335 112 0 0 chr18 27411479 27411791 -59265757 - AluSx SINE Alu 0 312 1 180 0 0 0 chr18 27411970 27411990 -59265558 + (TG)n Simple_repeat Simple_repeat 1 20 0 201 289 78 44 chr18 27413307 27413397 -59264151 + MIR SINE MIR 106 198 -64 232 211 53 0 chr18 27413450 27413507 -59264041 - MIR SINE MIR -87 175 116 1917 104 11 0 chr18 27414173 27414433 -59263115 - AluSx SINE Alu -49 263 1 233 307 139 0 chr18 27414433 27414534 -59263014 - MIR SINE MIR -70 192 78 547 207 63 0 chr18 27417652 27417763 -59259785 - FLAM_C SINE Alu -24 119 2 290 148 0 37 chr18 27418871 27418925 -59258623 - L2 LINE L2 0 3313 3262 2209 109 0 7 chr18 27418982 27419275 -59258273 - AluSx SINE Alu -21 291 1 258 242 16 0 chr18 27420110 27420172 -59257376 + MER5B DNA MER1_type 35 97 -81 1750 169 21 3 chr18 27420191 27420475 -59257073 + AluJb SINE Alu 5 293 -19 1549 138 110 0 chr18 27420574 27420876 -59256672 + AluJb SINE Alu 1 330 0 204 256 12 49 chr18 27420984 27421066 -59256482 + MIR SINE MIR 97 175 -87 2032 103 10 10 chr18 27421787 27422089 -59255459 - L1MA2 LINE L1 -4 6300 5999 246 49 219 0 chr18 27422092 27422133 -59255415 + MADE1 DNA Mariner 31 80 0 2049 157 0 3 chr18 27422310 27422623 -59254925 + AluJo SINE Alu 1 312 0 730 197 0 8 chr18 27424399 27424531 -59253017 - MER115 DNA AcHobo 0 693 563 249 33 0 0 chr18 27424963 27424993 -59252555 + (CA)n Simple_repeat Simple_repeat 1 30 0 319 177 51 0 chr18 27425181 27425260 -59252288 - MER5B DNA MER1_type -77 101 19 1394 164 84 0 chr18 27426641 27426940 -59250608 - MER33 DNA MER1_type 0 324 1 900 146 0 15 chr18 27428220 27428357 -59249191 + AluJo SINE Alu 1 135 -177 1620 193 3 13 chr18 27428357 27428668 -59248880 + AluJo SINE Alu 1 308 -4 2627 44 0 0 chr18 27430274 27430571 -59246977 - AluY SINE Alu -14 297 1 888 178 0 0 chr18 27430571 27430713 -59246835 - AluJb SINE Alu -168 144 3 219 88 0 0 chr18 27431716 27431750 -59245798 + (CA)n Simple_repeat Simple_repeat 2 35 0 1677 137 0 97 chr18 27432296 27432477 -59245071 - AluJo SINE Alu -19 293 155 1779 134 40 7 chr18 27432477 27432753 -59244795 - AluJb SINE Alu -27 285 1 1677 137 0 97 chr18 27432753 27432892 -59244656 - AluJo SINE Alu -157 155 4 598 278 79 4 chr18 27433106 27433333 -59244215 + MLT1L LTR MaLR 346 589 -26 1888 160 7 14 chr18 27433786 27434079 -59243469 - AluJo SINE Alu -19 293 3 1961 131 0 24 chr18 27434090 27434404 -59243144 - AluSx SINE Alu 0 307 1 288 288 47 90 chr18 27434407 27434640 -59242908 - L2 LINE L2 -16 3256 3034 783 163 91 91 chr18 27434957 27435106 -59242442 + MER3 DNA MER1_type 1 153 -56 2332 78 3 0 chr18 27435106 27435411 -59242137 + AluSq SINE Alu 1 306 0 783 163 91 91 chr18 27435411 27435469 -59242079 + MER3 DNA MER1_type 152 209 0 1270 181 0 28 chr18 27435593 27435841 -59241707 - AluJo SINE Alu -13 299 59 489 240 186 6 chr18 27435972 27436155 -59241393 + L1ME2 LINE L1 5872 6087 -77 180 0 0 0 chr18 27436932 27436952 -59240596 + (TC)n Simple_repeat Simple_repeat 1 20 0 196 269 0 0 chr18 27437250 27437302 -59240246 - L2 LINE L2 -1 3312 3261 26 30 0 0 chr18 27437592 27437625 -59239923 + AT_rich Low_complexity Low_complexity 1 33 0 652 117 109 0 chr18 27437625 27437753 -59239795 - L1MA5 LINE L1 0 6300 6159 256 311 93 42 chr18 27438031 27438224 -59239324 + MIR SINE MIR 31 233 -29 246 272 26 35 chr18 27439126 27439240 -59238308 + L1ME4a LINE L1 5944 6056 -65 193 289 66 13 chr18 27439828 27439904 -59237644 - MIR SINE MIR -111 151 72 2150 123 3 0 chr18 27440332 27440625 -59236923 - AluSx SINE Alu -18 294 1 22 0 0 0 chr18 27440667 27440689 -59236859 + AT_rich Low_complexity Low_complexity 1 22 0 1975 145 7 0 chr18 27440921 27441210 -59236338 + AluSx SINE Alu 1 291 -21 2409 93 0 3 chr18 27441313 27441614 -59235934 - AluSp SINE Alu -13 300 1 1317 78 28 17 chr18 27441618 27441797 -59235751 - THE1B LTR MaLR -183 181 1 201 293 0 57 chr18 27442784 27442890 -59234658 + CT-rich Low_complexity Low_complexity 3 102 0 2312 84 7 14 chr18 27443189 27443485 -59234063 + AluSx SINE Alu 12 305 -7 195 42 0 0 chr18 27444412 27444436 -59233112 + (T)n Simple_repeat Simple_repeat 1 24 0 2190 100 10 3 chr18 27444894 27445183 -59232365 + AluSg SINE Alu 1 291 -19 337 242 11 32 chr18 27445507 27445602 -59231946 - MIR SINE MIR -164 98 6 713 175 0 29 chr18 27445807 27445944 -59231604 + FLAM_C SINE Alu 1 133 0 2079 82 4 11 chr18 27445965 27446233 -59231315 + AluSp SINE Alu 1 266 -47 1555 226 70 34 chr18 27446704 27447147 -59230401 + MLT1D LTR MaLR 14 472 -33 809 248 145 88 chr18 27447306 27447352 -59230196 - MLT1K LTR MaLR -2 586 544 1484 170 31 15 chr18 27447352 27447611 -59229937 + AluJo SINE Alu 14 276 -36 809 248 145 88 chr18 27447611 27448109 -59229439 - MLT1K LTR MaLR -44 544 11 2231 107 10 0 chr18 27448687 27448976 -59228572 - AluSg SINE Alu -18 292 1 2483 204 19 57 chr18 27449824 27449915 -59227633 - MER68 LTR ERV1 -4 558 465 1934 131 3 34 chr18 27449915 27450206 -59227342 + AluJo SINE Alu 1 282 -30 2483 204 19 57 chr18 27450206 27450693 -59226855 - MER68 LTR ERV1 -97 465 2 283 282 73 9 chr18 27450738 27450848 -59226700 - L3 LINE CR1 -58 1519 1403 255 254 94 30 chr18 27450980 27451095 -59226453 - MIR3 SINE MIR -42 166 49 617 263 31 7 chr18 27451153 27451528 -59226020 + MER113 DNA MER1_type? 31 479 -42 2435 79 0 13 chr18 27451805 27452121 -59225427 - AluSx SINE Alu 0 312 1 531 65 39 0 chr18 27452353 27452430 -59225118 - MADE1 DNA Mariner 0 80 1 290 284 246 8 chr18 27452649 27452783 -59224765 + MIR SINE MIR 18 183 -79 250 284 0 53 chr18 27452984 27453079 -59224469 + Charlie8 DNA MER1_type 16 105 -2312 2155 108 30 7 chr18 27453104 27453220 -59224328 + AluSx SINE Alu 1 113 -199 207 0 0 0 chr18 27453220 27453243 -59224305 + (TAA)n Simple_repeat Simple_repeat 2 24 0 2155 108 30 7 chr18 27453243 27453431 -59224117 + AluSx SINE Alu 113 312 0 358 232 91 0 chr18 27453535 27453634 -59223914 + MER5B DNA MER1_type 1 108 -70 183 139 0 0 chr18 27454370 27454406 -59223142 + (A)n Simple_repeat Simple_repeat 1 36 0 317 217 287 49 chr18 27455000 27455143 -59222405 + MER5A DNA MER1_type 12 188 -1 306 178 228 30 chr18 27455455 27455556 -59221992 - L2 LINE L2 -14 3299 3179 282 284 65 25 chr18 27456053 27456254 -59221294 + L1M4 LINE L1 3403 3611 -2535 305 300 97 41 chr18 27456381 27456578 -59220970 + L1M4 LINE L1 3808 4033 -2113 2123 117 3 16 chr18 27456578 27456887 -59220661 + AluSg SINE Alu 1 305 -5 305 300 97 41 chr18 27456887 27457029 -59220519 + L1M4 LINE L1 4033 4166 -1980 1699 160 0 28 chr18 27457043 27457330 -59220218 + AluJo SINE Alu 21 299 -13 1703 175 0 11 chr18 27457330 27457593 -59219955 + AluSx SINE Alu 1 260 -52 419 171 24 49 chr18 27457597 27457761 -59219787 + GA-rich Low_complexity Low_complexity 1 160 0 213 237 0 0 chr18 27457798 27457857 -59219691 + G-rich Low_complexity Low_complexity 1 59 0 23 0 0 0 chr18 27458052 27458075 -59219473 + GC_rich Low_complexity Low_complexity 1 23 0 29 61 0 0 chr18 27458209 27458242 -59219306 + GC_rich Low_complexity Low_complexity 1 33 0 466 304 145 5 chr18 27460250 27460464 -59217084 + MIR SINE MIR 13 256 -6 2573 59 0 28 chr18 27460480 27460800 -59216748 - AluY SINE Alu 0 311 1 299 245 20 20 chr18 27460964 27461062 -59216486 - LTR67 LTR ERVL 0 557 460 2357 104 0 0 chr18 27461448 27461746 -59215802 + AluSq SINE Alu 1 298 -15 268 247 134 10 chr18 27461783 27461880 -59215668 + MIR3 SINE MIR 81 189 -19 977 155 0 50 chr18 27462027 27462159 -59215389 - AluSg/x SINE Alu -7 303 181 5796 0 0 11 chr18 27462159 27462802 -59214746 + LTR27 LTR ERV1 1 636 0 977 155 0 50 chr18 27462802 27462850 -59214698 - AluSg/x SINE Alu -129 181 132 735 188 8 8 chr18 27462850 27462983 -59214565 - FLAM_C SINE Alu 0 133 1 24 0 0 0 chr18 27462992 27463016 -59214532 + AT_rich Low_complexity Low_complexity 1 24 0 2270 243 58 28 chr18 27463078 27463853 -59213695 - L1ME1 LINE L1 -5 6161 5364 684 319 109 17 chr18 27464065 27464644 -59212904 - L1ME3A LINE L1 -226 5944 5313 523 320 79 27 chr18 27464650 27464788 -59212760 - L1ME3A LINE L1 -925 5221 5092 2331 81 0 10 chr18 27464788 27465084 -59212464 + AluSg SINE Alu 1 293 -17 523 320 79 27 chr18 27465084 27465655 -59211893 - L1ME3A LINE L1 -1054 5092 4475 3790 108 19 42 chr18 27465656 27466301 -59211247 - MER41B LTR ERV1 0 635 6 2522 137 98 31 chr18 27466426 27466996 -59210552 - MER4B LTR ERV1 0 903 1 419 198 0 0 chr18 27467121 27467202 -59210346 - AluJ/FRAM SINE Alu -16 296 216 317 302 70 0 chr18 27467205 27467291 -59210257 - HAL1 LINE L1 -637 1870 1779 1229 156 14 47 chr18 27467297 27467509 -59210039 - AluJo SINE Alu -107 205 1 319 287 78 61 chr18 27467512 27467742 -59209806 - HAL1 LINE L1 -169 2338 2105 1808 157 0 14 chr18 27467885 27468203 -59209345 + AluJb SINE Alu 1 314 0 216 0 0 0 chr18 27468203 27468227 -59209321 + (CA)n Simple_repeat Simple_repeat 1 24 0 647 255 91 8 chr18 27468270 27468513 -59209035 - HAL1 LINE L1 -565 1942 1680 420 263 196 45 chr18 27468535 27469025 -59208523 - HAL1 LINE L1 -1942 565 2 649 294 43 75 chr18 27469101 27469631 -59207917 - MER34 LTR ERV1 -29 513 1 180 77 0 0 chr18 27469808 27469834 -59207714 + (TTTCC)n Simple_repeat Simple_repeat 2 27 0 180 200 0 0 chr18 27469888 27469928 -59207620 + C-rich Low_complexity Low_complexity 1 40 0 304 364 54 43 chr18 27470639 27470767 -59206781 + HAL1 LINE L1 1046 1171 -1336 2236 110 3 3 chr18 27470767 27471076 -59206472 + AluSg SINE Alu 2 310 0 304 364 54 43 chr18 27471076 27471227 -59206321 + HAL1 LINE L1 1171 1328 -1179 21 57 0 0 chr18 27472260 27472295 -59205253 + AT_rich Low_complexity Low_complexity 1 35 0 1977 118 0 56 chr18 27472329 27472650 -59204898 + AluSx SINE Alu 1 303 -9 333 203 101 0 chr18 27472751 27472830 -59204718 + L2 LINE L2 3187 3273 -40 44 35 0 0 chr18 27473855 27473913 -59203635 + AT_rich Low_complexity Low_complexity 1 58 0 2499 77 0 6 chr18 27473932 27474245 -59203303 - AluY SINE Alu 0 311 1 357 127 79 0 chr18 27474351 27474414 -59203134 + L1ME4a LINE L1 6039 6106 -15 378 259 12 0 chr18 27474685 27474770 -59202778 - MIR3 SINE MIR -12 196 111 310 306 89 67 chr18 27475397 27475577 -59201971 + MIR SINE MIR 52 235 -27 192 314 71 14 chr18 27476330 27476400 -59201148 - MIR SINE MIR -55 207 134 614 236 73 17 chr18 27478256 27478434 -59199114 - MER5A DNA MER1_type 0 189 2 686 254 110 72 chr18 27478492 27478921 -59198627 - Charlie8 DNA MER1_type -1935 482 38 426 254 84 35 chr18 27480051 27480193 -59197355 + MER112 DNA MER1_type 1 149 -111 647 160 134 17 chr18 27480495 27480614 -59196934 + AluJo SINE Alu 3 135 -177 1826 189 0 10 chr18 27480614 27480927 -59196621 + AluJo SINE Alu 1 310 -2 1231 29 7 0 chr18 27480992 27481128 -59196420 + AluY SINE Alu 1 137 -174 182 36 0 36 chr18 27481128 27481156 -59196392 + (TCTCCC)n Simple_repeat Simple_repeat 2 28 0 7090 68 7 26 chr18 27481160 27482717 -59194831 + SVA Other Other 2 1411 0 1308 76 6 12 chr18 27482721 27482893 -59194655 + AluY SINE Alu 127 297 -14 259 296 83 19 chr18 27483234 27483342 -59194206 - MIR SINE MIR -128 134 20 328 304 25 50 chr18 27483546 27483707 -59193841 + MIR3 SINE MIR 46 202 -6 244 225 113 50 chr18 27484715 27484795 -59192753 + MIR3 SINE MIR 70 154 -54 828 229 0 17 chr18 27485111 27485290 -59192258 + L1ME LINE L1 5457 5632 -534 362 206 0 31 chr18 27485299 27485396 -59192152 + MER20 DNA MER1_type 3 96 -123 414 221 0 10 chr18 27486406 27486510 -59191038 + MER20 DNA MER1_type 117 219 0 1997 136 0 11 chr18 27486674 27486989 -59190559 + AluSx SINE Alu 1 312 0 207 204 0 0 chr18 27487750 27487799 -59189749 + (TG)n Simple_repeat Simple_repeat 1 49 0 572 207 63 0 chr18 27489126 27489237 -59188311 - FLAM_C SINE Alu -24 119 2 188 345 40 34 chr18 27489905 27490053 -59187495 + MER5A DNA MER1_type 19 167 -22 * 191 331 41 41 chr18 27489945 27490066 -59187482 - MER5A DNA MER1_type -48 141 21 314 148 0 37 chr18 27490345 27490399 -59187149 - L2 LINE L2 0 3313 3262 2226 109 0 7 chr18 27490456 27490749 -59186799 - AluSx SINE Alu -21 291 1 308 215 6 186 chr18 27491584 27491665 -59185883 + MER5B DNA MER1_type 35 70 -108 1782 169 21 3 chr18 27491665 27491949 -59185599 + AluJb SINE Alu 5 293 -19 308 215 6 186 chr18 27491949 27492039 -59185509 + MER5B DNA MER1_type 70 175 -3 1563 138 110 0 chr18 27492048 27492350 -59185198 + AluJb SINE Alu 1 330 0 264 265 26 86 chr18 27492389 27492540 -59185008 + MIR SINE MIR 34 175 -87 202 329 53 0 chr18 27492710 27492786 -59184762 - L2 LINE L2 0 3272 3193 2012 103 10 10 chr18 27493261 27493563 -59183985 - L1MA2 LINE L1 -4 6300 5999 229 86 0 0 chr18 27493572 27493607 -59183941 - MADE1 DNA Mariner -45 35 1 223 282 200 35 chr18 27493608 27493778 -59183770 + L2 LINE L2 3115 3312 -1 2091 157 0 3 chr18 27493784 27494097 -59183451 + AluJo SINE Alu 1 312 0 690 197 0 8 chr18 27495873 27496005 -59181543 - MER115 DNA AcHobo 0 693 563 249 33 0 0 chr18 27496437 27496467 -59181081 + (CA)n Simple_repeat Simple_repeat 1 30 0 356 177 51 0 chr18 27496655 27496734 -59180814 - MER5B DNA MER1_type -77 101 19 194 347 66 25 chr18 27497719 27497840 -59179708 - MIR SINE MIR -27 235 110 1357 164 84 0 chr18 27498115 27498414 -59179134 - MER33 DNA MER1_type 0 324 1 900 146 0 15 chr18 27499694 27499831 -59177717 + AluJo SINE Alu 1 135 -177 1620 193 3 13 chr18 27499831 27500142 -59177406 + AluJo SINE Alu 1 308 -4 2466 68 0 0 chr18 27501756 27502049 -59175499 - AluY SINE Alu -14 297 5 726 195 9 68 chr18 27502165 27502386 -59175162 + L1MC5 LINE L1 7724 7931 -30 189 0 0 0 chr18 27502479 27502500 -59175048 + (A)n Simple_repeat Simple_repeat 1 21 0 269 252 140 19 chr18 27504175 27504282 -59173266 + MIR SINE MIR 31 150 -112 25 31 0 0 chr18 27505367 27505399 -59172149 + AT_rich Low_complexity Low_complexity 1 32 0 668 168 16 8 chr18 27505703 27505828 -59171720 - AluSq/x SINE Alu -180 132 7 250 294 28 9 chr18 27505916 27506025 -59171523 - MIR SINE MIR -141 121 11 311 212 92 134 chr18 27506700 27506917 -59170631 + MIR SINE MIR 55 262 0 405 228 50 30 chr18 27506918 27507019 -59170529 + L2 LINE L2 3169 3271 -1 567 97 0 90 chr18 27507558 27507713 -59169835 + AluSc SINE Alu 29 169 -140 270 215 32 43 chr18 27510626 27510719 -59166829 + GA-rich Low_complexity Low_complexity 4 95 0 1813 176 77 3 chr18 27510719 27511059 -59166489 - MLT2D LTR ERVL -48 366 2 208 239 28 0 chr18 27512826 27512897 -59164651 + CT-rich Low_complexity Low_complexity 3 75 0 21 36 0 0 chr18 27515844 27515872 -59161676 + AT_rich Low_complexity Low_complexity 1 28 0 1026 206 10 111 chr18 27515980 27516286 -59161262 + AluJo SINE Alu 26 300 -12 395 300 33 114 chr18 27517500 27517773 -59159775 - L2 LINE L2 0 3272 3022 180 222 0 22 chr18 27519267 27519312 -59158236 - L2 LINE L2 -4 3268 3225 1941 228 104 28 chr18 27519809 27520391 -59157157 + MER20B DNA MER1_type 27 668 -115 1556 119 31 8 chr18 27520391 27520651 -59156897 - L1MB3 LINE L1 0 6183 5918 1941 228 104 28 chr18 27520651 27520744 -59156804 + MER20B DNA MER1_type 668 753 -30 436 74 0 0 chr18 27520749 27520803 -59156745 + Alu SINE Alu 238 291 -19 2306 88 3 0 chr18 27521483 27521768 -59155780 + AluSg SINE Alu 9 294 -16 1433 173 76 33 chr18 27522116 27522446 -59155102 - MER2 DNA MER2_type 0 344 1 220 136 51 85 chr18 27522578 27522637 -59154911 - L2 LINE L2 0 3272 3216 395 143 0 0 chr18 27523035 27523091 -59154457 + Tigger5 DNA MER2_type 2268 2323 0 1931 156 7 14 chr18 27523121 27523416 -59154132 + AluJo SINE Alu 1 293 -19 598 278 79 4 chr18 27523869 27524096 -59153452 - MLT1L LTR MaLR -26 589 346 1677 137 0 97 chr18 27524310 27524449 -59153099 + AluJo SINE Alu 4 96 -216 1779 134 40 7 chr18 27524449 27524725 -59152823 + AluJb SINE Alu 1 285 -27 1677 137 0 97 chr18 27524725 27524906 -59152642 + AluJo SINE Alu 96 293 -19 219 88 0 0 chr18 27525452 27525486 -59152062 + (TG)n Simple_repeat Simple_repeat 2 35 0 728 206 0 0 chr18 27526489 27526620 -59150928 + FLAM_C SINE Alu 3 133 0 1238 37 0 0 chr18 27526631 27526767 -59150781 + AluY SINE Alu 1 136 -175 1378 176 6 104 chr18 27527334 27527652 -59149896 - AluJo SINE Alu -13 299 13 1188 125 17 0 chr18 27527839 27528015 -59149533 - AluSg/x SINE Alu -2 308 130 219 208 97 42 chr18 27528922 27528994 -59148554 + L2 LINE L2 3230 3305 -8 180 0 0 0 chr18 27529056 27529076 -59148472 + (CA)n Simple_repeat Simple_repeat 1 20 0 441 283 105 0 chr18 27529894 27530085 -59147463 - L2 LINE L2 0 3313 3103 1288 186 35 58 chr18 27530467 27530811 -59146737 + MER58B DNA MER1_type 3 338 -3 449 176 24 88 chr18 27530992 27531044 -59146504 + L2 LINE L2 3187 3241 -72 1733 184 0 33 chr18 27531044 27531348 -59146200 - AluJb SINE Alu -18 294 1 449 176 24 88 chr18 27531348 27531420 -59146128 + L2 LINE L2 3241 3303 -10 548 212 124 0 chr18 27531420 27531533 -59146015 + FLAM_A SINE Alu 1 127 -6 29 78 0 0 chr18 27531586 27531650 -59145898 + AT_rich Low_complexity Low_complexity 1 64 0 995 259 70 39 chr18 27531710 27531776 -59145772 + L1MC4a LINE L1 5262 5325 -2483 1709 173 3 20 chr18 27531776 27532077 -59145471 + AluJb SINE Alu 1 296 -16 995 259 70 39 chr18 27532077 27532595 -59144953 + L1MC4a LINE L1 5325 5921 -1887 2388 116 0 0 chr18 27532902 27533213 -59144335 + AluSx SINE Alu 1 311 -1 1379 150 104 7 chr18 27534001 27534288 -59143260 + MER33 DNA MER1_type 1 315 -9 495 232 32 0 chr18 27534327 27534452 -59143096 - L2 LINE L2 -2 3311 3183 206 320 58 0 chr18 27535217 27535320 -59142228 + MIR3 SINE MIR 83 191 -17 979 131 82 58 chr18 27535637 27535843 -59141705 + AluJo SINE Alu 88 298 -14 14008 114 16 11 chr18 27535869 27537934 -59139614 + Tigger1 DNA MER2_type 11 2086 -332 503 240 144 7 chr18 27537936 27538082 -59139466 + FRAM SINE Alu 1 166 0 594 93 0 0 chr18 27538082 27538168 -59139380 + (GGGAA)n Simple_repeat Simple_repeat 1 86 0 384 217 24 12 chr18 27538168 27538251 -59139297 - Charlie1 DNA MER1_type -2677 84 1 375 303 81 0 chr18 27539120 27539305 -59138243 - MIR SINE MIR -3 259 60 1198 287 128 38 chr18 27539418 27539892 -59137656 + MLT1L LTR MaLR 1 535 -80 1970 129 7 18 chr18 27539892 27540209 -59137339 - AluSx SINE Alu 0 314 1 1198 287 128 38 chr18 27540209 27540290 -59137258 + MLT1L LTR MaLR 535 607 -8 23 33 0 0 chr18 27540678 27540708 -59136840 + AT_rich Low_complexity Low_complexity 1 30 0 1564 171 42 21 chr18 27540861 27541148 -59136400 - AluJo SINE Alu -19 293 1 317 261 36 9 chr18 27542392 27542503 -59135045 + L2 LINE L2 702 815 -2499 362 274 57 0 chr18 27542629 27542735 -59134813 + MIR SINE MIR 32 143 -119 978 144 0 0 chr18 27543078 27543258 -59134290 + (GGA)n Simple_repeat Simple_repeat 1 180 0 993 140 0 0 chr18 27543260 27543351 -59134197 + (GGA)n Simple_repeat Simple_repeat 1 269 0 993 140 0 0 chr18 27543351 27543529 -59134019 + (GGA)n Simple_repeat Simple_repeat 3 180 0 1734 185 77 3 chr18 27544483 27544823 -59132725 + MLT2D LTR ERVL 2 366 -48 223 281 0 16 chr18 27544823 27544887 -59132661 + C-rich Low_complexity Low_complexity 6 68 0 297 185 0 0 chr18 27544900 27544954 -59132594 + MLT2D LTR ERVL 501 554 0 673 306 15 0 chr18 27545164 27545370 -59132178 + MLT1J LTR MaLR 1 209 -302 1804 163 3 31 chr18 27545611 27545931 -59131617 + AluJo SINE Alu 1 311 -1 1754 170 5 81 chr18 27545951 27546345 -59131203 + MLT1A2 LTR MaLR 5 368 -6 297 335 68 34 chr18 27546410 27546586 -59130962 + MIR SINE MIR 12 193 -69 906 275 69 26 chr18 27547279 27547511 -59130037 + L1MC4 LINE L1 6533 6783 -1259 2129 126 17 0 chr18 27547511 27547805 -59129743 - AluSx SINE Alu -13 299 1 906 275 69 26 chr18 27547805 27547877 -59129671 + L1MC4 LINE L1 6783 6850 -1192 322 239 0 0 chr18 27547883 27547950 -59129598 - L1MB7 LINE L1 -151 6033 5967 3591 171 17 39 chr18 27547961 27548323 -59129225 - L1MB7 LINE L1 -188 5996 5627 306 0 0 0 chr18 27548323 27548357 -59129191 + (CA)n Simple_repeat Simple_repeat 2 35 0 3591 171 17 39 chr18 27548357 27549176 -59128372 - L1MB7 LINE L1 -557 5627 4847 240 35 0 0 chr18 27551187 27551216 -59126332 + (A)n Simple_repeat Simple_repeat 1 29 0 3990 202 98 10 chr18 27551216 27552365 -59125183 - L1MB7 LINE L1 -1286 4860 3589 1275 269 50 56 chr18 27552639 27552735 -59124813 - MLT1J LTR MaLR 0 511 416 6847 76 29 1 chr18 27552735 27553010 -59124538 + L1PA14 LINE L1 4740 5006 -1155 1854 160 7 10 chr18 27553010 27553310 -59124238 + AluJb SINE Alu 1 299 -13 6847 76 29 1 chr18 27553310 27553322 -59124226 + L1PA14 LINE L1 5006 5016 -1145 2032 131 0 7 chr18 27553322 27553658 -59123890 + AluSx SINE Alu 1 334 0 6847 76 29 1 chr18 27553658 27554773 -59122775 + L1PA14 LINE L1 5016 6161 0 1275 269 50 56 chr18 27554773 27555160 -59122388 - MLT1J LTR MaLR -95 416 31 238 322 92 73 chr18 27555226 27555540 -59122008 + L2 LINE L2 2565 2884 -430 468 48 0 0 chr18 27555579 27555642 -59121906 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 1311 241 132 34 chr18 27555658 27555711 -59121837 + MLT1H LTR MaLR 1 47 -502 4341 101 44 2 chr18 27555711 27556296 -59121252 - MER4B LTR ERV1 0 610 1 1311 241 132 34 chr18 27556296 27556711 -59120837 + MLT1H LTR MaLR 47 515 -34 336 392 24 51 chr18 27556749 27556897 -59120651 + L2 LINE L2 2932 3072 -200 1613 176 23 7 chr18 27556897 27557198 -59120350 - AluJo SINE Alu -6 306 1 336 392 24 51 chr18 27557198 27557304 -59120244 + L2 LINE L2 3072 3179 -93 2002 155 0 19 chr18 27557623 27557939 -59119609 - AluJo SINE Alu -2 310 1 28 29 0 0 chr18 27558032 27558067 -59119481 + AT_rich Low_complexity Low_complexity 1 35 0 246 313 61 10 chr18 27558846 27558945 -59118603 - MIR SINE MIR -109 153 50 627 209 17 11 chr18 27559884 27560061 -59117487 - L1MB3 LINE L1 -85 6098 5921 256 209 38 29 chr18 27560061 27560166 -59117382 + MER20B DNA MER1_type 653 758 -25 * 314 146 0 18 chr18 27560165 27560220 -59117328 + Alu SINE Alu 238 291 -9 2327 91 3 0 chr18 27560900 27561196 -59116352 + AluSg SINE Alu 9 305 -5 35 54 0 0 chr18 27561236 27561292 -59116256 + AT_rich Low_complexity Low_complexity 1 56 0 1019 254 90 22 chr18 27561748 27562282 -59115266 - L1MC4a LINE L1 -1887 5921 5295 24 0 0 0 chr18 27562544 27562568 -59114980 + GC_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr18 27562584 27562604 -59114944 + (A)n Simple_repeat Simple_repeat 1 20 0 189 0 0 0 chr18 27562617 27562638 -59114910 + (T)n Simple_repeat Simple_repeat 1 21 0 51 17 0 0 chr18 27562644 27562702 -59114846 + AT_rich Low_complexity Low_complexity 1 58 0 22 0 0 0 chr18 27562702 27562724 -59114824 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr18 27562826 27562850 -59114698 + (A)n Simple_repeat Simple_repeat 1 24 0 257 265 12 24 chr18 27563062 27563145 -59114403 - MER3 DNA MER1_type -100 109 28 1718 178 0 0 chr18 27563282 27563568 -59113980 + AluJb SINE Alu 1 286 -26 2348 86 0 3 chr18 27563890 27564192 -59113356 - AluY SINE Alu -10 301 1 1664 196 74 26 chr18 27564560 27564937 -59112611 + MLT1D LTR MaLR 47 441 -64 1124 213 0 21 chr18 27564945 27565185 -59112363 + AluJo SINE Alu 58 292 -20 1892 135 71 0 chr18 27565213 27565495 -59112053 + AluSx SINE Alu 1 302 -10 386 250 68 45 chr18 27566125 27566257 -59111291 - MIR3 SINE MIR -10 198 64 2193 115 3 3 chr18 27567028 27567324 -59110224 - AluSq SINE Alu -17 296 1 424 165 102 87 chr18 27567335 27567462 -59110086 - FLAM_C SINE Alu -4 129 1 2398 94 0 0 chr18 27567492 27567800 -59109748 - AluSg SINE Alu -2 308 1 389 255 10 10 chr18 27567800 27567902 -59109646 + MLT1K LTR MaLR 485 586 -2 206 232 121 71 chr18 27567974 27568073 -59109475 + L2 LINE L2 2370 2473 -841 232 320 0 48 chr18 27569104 27569207 -59108341 + L2 LINE L2 2914 3011 -261 195 42 0 0 chr18 27570968 27570992 -59106556 + (A)n Simple_repeat Simple_repeat 1 24 0 309 296 9 19 chr18 27571025 27571133 -59106415 + MIR SINE MIR 151 257 -5 769 245 108 21 chr18 27571355 27571596 -59105952 + MIR SINE MIR 1 262 0 2495 61 0 0 chr18 27572297 27572592 -59104956 - AluY SINE Alu -16 295 1 211 271 104 35 chr18 27572939 27573083 -59104465 - L2 LINE L2 0 3313 3160 735 169 0 32 chr18 27574367 27574491 -59103057 - AluJo SINE Alu -147 165 46 1464 178 95 3 chr18 27576055 27576414 -59101134 - Charlie5 DNA MER1_type 0 2624 2233 613 158 16 47 chr18 27576414 27576541 -59101007 - Charlie5 DNA MER1_type -2489 123 1 283 270 88 7 chr18 27576921 27577058 -59100490 - L1ME4a LINE L1 -4 6117 5970 1171 241 9 0 chr18 27577103 27577335 -59100213 + Charlie1a DNA MER1_type 18 251 -1204 348 179 15 0 chr18 27577402 27577469 -59100079 + Charlie1a DNA MER1_type 259 326 -1129 216 0 0 0 chr18 27577469 27577493 -59100055 + (T)n Simple_repeat Simple_repeat 1 24 0 45 34 0 0 chr18 27577511 27577570 -59099978 + GC_rich Low_complexity Low_complexity 1 59 0 184 333 46 0 chr18 27578159 27578246 -59099302 + L2 LINE L2 2439 2529 -785 2373 100 3 0 chr18 27578252 27578563 -59098985 - AluSx SINE Alu 0 312 1 582 268 34 24 chr18 27579138 27579347 -59098201 + MIR SINE MIR 2 212 -50 1978 144 7 3 chr18 27579931 27580236 -59097312 + AluJo SINE Alu 1 306 -6 2376 91 0 3 chr18 27580681 27580979 -59096569 + AluSg SINE Alu 1 297 -13 189 0 0 0 chr18 27581616 27581637 -59095911 + (T)n Simple_repeat Simple_repeat 1 21 0 231 200 108 31 chr18 27582341 27582406 -59095142 - L2 LINE L2 0 3272 3203 1867 113 0 75 chr18 27583565 27583885 -59093663 - AluSq SINE Alu -17 296 1 248 286 111 24 chr18 27584313 27584439 -59093109 + MIR SINE MIR 124 260 -2 709 243 42 23 chr18 27584477 27584691 -59092857 + MIR SINE MIR 16 233 -29 265 305 57 0 chr18 27584678 27584783 -59092765 - MIR SINE MIR -35 227 117 * 2516 65 0 3 chr18 27585240 27585548 -59092000 - AluY SINE Alu -4 307 1 405 308 31 15 chr18 27586392 27586522 -59091026 + MIR SINE MIR 20 151 -57 395 271 106 83 chr18 27586921 27587316 -59090232 - L2 LINE L2 -85 3228 2825 2763 103 16 8 chr18 27587747 27588117 -59089431 + THE1C LTR MaLR 1 373 -2 10833 108 34 42 chr18 27588119 27589712 -59087836 + THE1C-int LTR MaLR 1 1580 0 2788 105 14 3 chr18 27589713 27590083 -59087465 + THE1C LTR MaLR 2 375 0 463 250 195 83 chr18 27590269 27590653 -59086895 + MLT1K LTR MaLR 151 577 -11 753 297 46 44 chr18 27590683 27590886 -59086662 - L2 LINE L2 -85 3228 3022 1650 193 7 3 chr18 27590886 27591187 -59086361 - AluJb SINE Alu -9 303 2 753 297 46 44 chr18 27591187 27591373 -59086175 - L2 LINE L2 -291 3022 2838 306 0 0 0 chr18 27591676 27591710 -59085838 + (TG)n Simple_repeat Simple_repeat 1 34 0 345 195 13 26 chr18 27591806 27591883 -59085665 - MER116 DNA Mariner 0 80 5 240 274 65 0 chr18 27592604 27592666 -59084882 + MIR3 SINE MIR 112 177 -31 237 65 0 0 chr18 27592731 27592762 -59084786 + (CA)n Simple_repeat Simple_repeat 2 32 0 356 331 62 79 chr18 27593754 27594123 -59083425 - L2 LINE L2 -1 3271 2909 1585 122 14 0 chr18 27594132 27594354 -59083194 - AluSg/x SINE Alu -16 294 70 3140 219 45 24 chr18 27594402 27594728 -59082820 + Charlie1a DNA MER1_type 1 319 -2442 1525 165 19 73 chr18 27594728 27595043 -59082505 - AluJo SINE Alu -14 298 1 3140 219 45 24 chr18 27595043 27595434 -59082114 + Charlie1a DNA MER1_type 319 733 -722 876 314 75 70 chr18 27595573 27595636 -59081912 + L1ME2 LINE L1 3794 3855 -2291 2121 152 17 17 chr18 27595636 27595984 -59081564 - MER7A DNA MER2_type 0 346 1 876 314 75 70 chr18 27595984 27596181 -59081367 + L1ME2 LINE L1 3855 4050 -2096 2526 54 0 10 chr18 27596181 27596494 -59081054 + AluY SINE Alu 1 310 -1 876 314 75 70 chr18 27596494 27596519 -59081029 + L1ME2 LINE L1 4050 4073 -2073 2209 112 3 10 chr18 27596519 27596831 -59080717 + AluSx SINE Alu 1 310 -2 876 314 75 70 chr18 27596831 27597771 -59079777 + L1ME2 LINE L1 4073 5027 -1119 236 91 23 0 chr18 27597895 27597939 -59079609 + L1MA7 LINE L1 6247 6291 0 1001 239 104 7 chr18 27598049 27598548 -59079000 + L1ME2 LINE L1 5254 5966 -198 316 344 66 33 chr18 27598549 27598793 -59078755 + L1MC4a LINE L1 5681 5932 -1876 28 0 0 0 chr18 27599013 27599041 -59078507 + AT_rich Low_complexity Low_complexity 1 28 0 410 285 27 7 chr18 27599165 27599314 -59078234 - MIR SINE MIR -54 154 2 828 170 248 15 chr18 27599348 27599618 -59077930 - MER96B DNA MER1_type? -45 372 40 437 247 203 25 chr18 27600010 27600168 -59077380 - MER5A DNA MER1_type 0 189 4 853 281 103 26 chr18 27600303 27600758 -59076790 - MER90 LTR ERV1 -7 607 118 516 158 0 0 chr18 27600975 27601051 -59076497 + MADE1 DNA Mariner 1 76 -4 423 273 0 0 chr18 27601320 27601419 -59076129 - MIR SINE MIR -108 154 56 633 216 99 13 chr18 27602131 27602308 -59075240 + MIR SINE MIR 3 192 -62 194 277 12 60 chr18 27602903 27602986 -59074562 + MIR SINE MIR 15 93 -169 384 324 150 0 chr18 27604074 27604287 -59073261 - MIR SINE MIR -16 246 2 1412 183 10 48 chr18 27604579 27604890 -59072658 + AluJb SINE Alu 9 307 -5 221 180 60 0 chr18 27606297 27606347 -59071201 + (CATATA)n Simple_repeat Simple_repeat 1 53 0 273 325 0 0 chr18 27606388 27606471 -59071077 - MIR SINE MIR -1 261 179 1505 201 8 63 chr18 27607423 27607802 -59069746 - MLT1A2 LTR MaLR 0 374 17 2519 58 0 0 chr18 27608096 27608387 -59069161 + AluY SINE Alu 1 291 -20 282 271 220 23 chr18 27608458 27608635 -59068913 + L2 LINE L2 3102 3313 0 2043 128 10 0 chr18 27608893 27609182 -59068366 + AluSx SINE Alu 1 292 -20 213 39 0 0 chr18 27609182 27609208 -59068340 + (GA)n Simple_repeat Simple_repeat 2 27 0 266 280 189 8 chr18 27609508 27609640 -59067908 + MER103 DNA DNA 2 157 -9 747 136 12 130 chr18 27609650 27609812 -59067736 - FRAM SINE Alu -16 160 18 1760 170 17 0 chr18 27609820 27610109 -59067439 - AluJo SINE Alu -14 298 5 1066 186 11 5 chr18 27610173 27610361 -59067187 + MER5A DNA MER1_type 1 189 0 2244 102 0 40 chr18 27611642 27611965 -59065583 + AluSg SINE Alu 1 310 0 183 42 0 0 chr18 27612245 27612269 -59065279 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2082 103 0 31 chr18 27612271 27612562 -59064986 - AluSx SINE Alu -30 282 1 246 270 111 24 chr18 27612990 27613116 -59064432 + MIR SINE MIR 124 260 -2 641 243 42 23 chr18 27613154 27613368 -59064180 + MIR SINE MIR 16 233 -29 226 257 43 0 chr18 27613390 27613460 -59064088 - MIR SINE MIR -73 189 117 2187 68 4 11 chr18 27613917 27614196 -59063352 - AluSc SINE Alu -4 305 29 405 228 50 30 chr18 27614735 27614836 -59062712 - L2 LINE L2 -1 3271 3169 311 212 92 134 chr18 27614837 27615054 -59062494 - MIR SINE MIR 0 262 55 250 294 28 9 chr18 27615728 27615837 -59061711 + MIR SINE MIR 11 121 -141 2345 109 0 0 chr18 27615918 27616230 -59061318 + AluSx SINE Alu 1 312 0 185 280 0 0 chr18 27617102 27617152 -59060396 + L2 LINE L2 3263 3312 -1 346 325 76 14 chr18 27617314 27617603 -59059945 + L2 LINE L2 2439 2745 -569 473 304 37 7 chr18 27617940 27618075 -59059473 + L2 LINE L2 3134 3272 0 267 79 0 0 chr18 27619852 27619890 -59057658 + (CA)n Simple_repeat Simple_repeat 2 39 0 27 87 0 0 chr18 27621125 27621194 -59056354 + GC_rich Low_complexity Low_complexity 1 69 0 205 204 20 51 chr18 27621294 27621392 -59056156 + G-rich Low_complexity Low_complexity 6 100 0 22 0 0 0 chr18 27621466 27621488 -59056060 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 27621635 27621656 -59055892 + GC_rich Low_complexity Low_complexity 1 21 0 257 267 35 0 chr18 27623715 27623801 -59053747 - MIR3 SINE MIR -2 206 118 608 293 93 35 chr18 27623929 27624305 -59053243 - MARNA DNA Mariner -135 451 54 25 0 0 0 chr18 27624608 27624633 -59052915 + AT_rich Low_complexity Low_complexity 1 25 0 2265 87 0 55 chr18 27625938 27626250 -59051298 - AluSx SINE Alu -17 295 1 459 284 28 0 chr18 27626603 27626744 -59050804 + MIR SINE MIR 118 262 0 189 94 0 0 chr18 27627988 27628020 -59049528 + (A)n Simple_repeat Simple_repeat 1 32 0 231 114 0 0 chr18 27628021 27628056 -59049492 + (CA)n Simple_repeat Simple_repeat 1 35 0 1946 137 20 0 chr18 27628117 27628416 -59049132 + AluSx SINE Alu 1 305 -7 1621 157 18 3 chr18 27629342 27629628 -59047920 + L1MB3 LINE L1 5892 6181 -2 180 77 0 0 chr18 27630168 27630194 -59047354 + (T)n Simple_repeat Simple_repeat 1 26 0 315 0 0 0 chr18 27630364 27630399 -59047149 + (TTG)n Simple_repeat Simple_repeat 2 36 0 231 182 45 0 chr18 27631589 27631633 -59045915 + CT-rich Low_complexity Low_complexity 5 50 0 575 98 0 59 chr18 27631810 27631912 -59045636 - L1PA10 LINE L1 0 6168 6073 240 164 41 41 chr18 27633406 27633479 -59044069 + A-rich Low_complexity Low_complexity 5 77 0 472 208 31 0 chr18 27633899 27633995 -59043553 + MER7A DNA MER2_type 2 98 -248 800 146 7 51 chr18 27634148 27634285 -59043263 + FLAM_C SINE Alu 1 131 -2 382 312 78 0 chr18 27634683 27634824 -59042724 + MIR SINE MIR 63 214 -48 22 35 0 0 chr18 27634920 27634949 -59042599 + AT_rich Low_complexity Low_complexity 1 29 0 2176 139 0 0 chr18 27635000 27635310 -59042238 - AluSg SINE Alu 0 310 1 753 181 15 23 chr18 27635919 27636052 -59041496 + FLAM_C SINE Alu 2 133 0 216 97 0 0 chr18 27637362 27637393 -59040155 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 2071 124 0 16 chr18 27637526 27637840 -59039708 - AluJo SINE Alu -3 309 1 2239 136 0 3 chr18 27638065 27638373 -59039175 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr18 27638377 27638398 -59039150 + AT_rich Low_complexity Low_complexity 1 21 0 437 180 25 74 chr18 27639394 27639444 -59038104 - MER104 DNA Tc2 -1726 172 121 2653 96 8 6 chr18 27639444 27639807 -59037741 + THE1B LTR MaLR 1 364 0 437 180 25 74 chr18 27639807 27639878 -59037670 - MER104 DNA Tc2 -1777 121 57 978 224 51 4 chr18 27639892 27640129 -59037419 + MIR SINE MIR 5 252 -10 249 296 23 30 chr18 27640163 27640295 -59037253 - MIR SINE MIR -2 260 130 1922 131 71 0 chr18 27640297 27640579 -59036969 - AluSx SINE Alu -10 302 1 1390 165 0 52 chr18 27640607 27640855 -59036693 - AluJo SINE Alu -20 292 58 1789 211 71 24 chr18 27640863 27641284 -59036264 - MLT1D LTR MaLR -64 441 1 244 314 58 26 chr18 27641298 27641454 -59036094 - L2 LINE L2 -633 2681 2521 279 0 0 0 chr18 27641494 27641525 -59036023 + (TTA)n Simple_repeat Simple_repeat 3 33 0 1222 42 0 0 chr18 27641525 27641668 -59035880 - L1PA4 LINE L1 -18 6137 5995 226 293 0 0 chr18 27641674 27641732 -59035816 - MER5A DNA MER1_type -123 66 9 282 264 163 50 chr18 27641739 27641784 -59035764 - L2 LINE L2 -1179 2135 2096 1869 147 3 17 chr18 27641784 27642222 -59035326 + AluJo SINE Alu 1 434 0 282 264 163 50 chr18 27642222 27642432 -59035116 - L2 LINE L2 -1218 2096 1849 213 319 0 0 chr18 27643947 27644016 -59033532 - MIR SINE MIR -110 152 84 1525 221 43 41 chr18 27644022 27644165 -59033383 - HsTC2 DNA Tc2 2 1900 1759 1862 128 7 18 chr18 27644165 27644446 -59033102 + AluJb SINE Alu 1 278 -34 1525 221 43 41 chr18 27644446 27644719 -59032829 - HsTC2 DNA Tc2 -139 1759 1307 370 234 178 0 chr18 27644730 27644837 -59032711 - HsTC2 DNA Tc2 -1754 144 19 506 250 127 33 chr18 27647129 27647405 -59030143 + L2 LINE L2 2991 3292 -21 261 0 0 0 chr18 27647415 27647444 -59030104 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2136 108 3 33 chr18 27648594 27648901 -59028647 - AluSp SINE Alu -1 312 15 262 0 26 26 chr18 27652120 27652159 -59025389 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1170 202 108 56 chr18 27653099 27653260 -59024288 - AluJo SINE Alu 0 302 118 2240 93 3 31 chr18 27653260 27653581 -59023967 + AluSx SINE Alu 1 312 0 1170 202 108 56 chr18 27653581 27653706 -59023842 - AluJo SINE Alu -184 118 1 24 0 0 0 chr18 27653706 27653730 -59023818 + AT_rich Low_complexity Low_complexity 1 24 0 812 250 24 9 chr18 27653736 27653948 -59023600 - U3 snRNA snRNA -2 215 1 277 329 108 25 chr18 27653967 27654207 -59023341 + MIR SINE MIR 2 261 -1 2170 106 14 3 chr18 27654605 27654897 -59022651 - AluSx SINE Alu -17 295 1 187 269 0 0 chr18 27655208 27655260 -59022288 - MIR SINE MIR -71 191 140 339 247 10 31 chr18 27655362 27655459 -59022089 + MLT1K LTR MaLR 18 112 -476 504 282 64 45 chr18 27655548 27655814 -59021734 + MLT1K LTR MaLR 280 550 -38 206 121 0 0 chr18 27655815 27655848 -59021700 + (T)n Simple_repeat Simple_repeat 1 33 0 2369 108 61 19 chr18 27655862 27656222 -59021326 + THE1C LTR MaLR 1 375 0 1352 249 92 63 chr18 27656405 27656894 -59020654 + MLT1J LTR MaLR 5 507 -4 4149 155 40 43 chr18 27657180 27657606 -59019942 - L1MB1 LINE L1 -153 6036 5610 2104 120 0 0 chr18 27657606 27657937 -59019611 - AluSx SINE Alu 0 331 1 4149 155 40 43 chr18 27657937 27658061 -59019487 - L1MB1 LINE L1 -579 5610 5487 237 65 0 0 chr18 27658061 27658092 -59019456 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4149 155 40 43 chr18 27658092 27658142 -59019406 - L1MB1 LINE L1 -702 5487 5438 207 114 0 0 chr18 27658142 27658177 -59019371 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 4149 155 40 43 chr18 27658177 27658871 -59018677 - L1MB1 LINE L1 -751 5438 4739 839 156 0 21 chr18 27658871 27659012 -59018536 - FLAM_C SINE Alu -5 138 1 244 104 0 83 chr18 27659017 27659065 -59018483 - L1MB1 LINE L1 -1404 4742 4699 897 262 150 14 chr18 27659764 27660050 -59017498 - MLT1H LTR MaLR 0 549 225 1879 161 13 0 chr18 27660061 27660458 -59017090 + AluJb SINE Alu 9 409 0 496 151 70 0 chr18 27660558 27660644 -59016904 - MLT1H LTR MaLR -453 96 5 1505 190 65 73 chr18 27661749 27662134 -59015414 - MER66A LTR ERV1 0 478 97 296 56 0 0 chr18 27662507 27662543 -59015005 + U2 snRNA snRNA 1 36 -152 291 280 320 6 chr18 27662645 27662820 -59014728 + MIR SINE MIR 14 243 -19 195 42 0 0 chr18 27663037 27663061 -59014487 + (TG)n Simple_repeat Simple_repeat 2 25 0 838 171 157 0 chr18 27663080 27663244 -59014304 + FRAM SINE Alu 1 182 0 1794 117 7 75 chr18 27663692 27663999 -59013549 + AluJo SINE Alu 1 286 -26 335 362 142 37 chr18 27664240 27664508 -59013040 + L2 LINE L2 2971 3266 -6 243 79 0 0 chr18 27664918 27664956 -59012592 + (GA)n Simple_repeat Simple_repeat 2 39 0 234 260 48 10 chr18 27665641 27665745 -59011803 - L1MC4 LINE L1 -98 7944 7837 342 0 0 0 chr18 27665968 27666006 -59011542 + (CA)n Simple_repeat Simple_repeat 2 39 0 1297 188 12 50 chr18 27666737 27667056 -59010492 + Charlie1 DNA MER1_type 2343 2649 -112 516 72 0 0 chr18 27667070 27667139 -59010409 + (TTCC)n Simple_repeat Simple_repeat 4 72 0 2002 130 7 7 chr18 27667148 27667440 -59010108 - AluSx SINE Alu -8 304 13 452 175 146 0 chr18 27667440 27667543 -59010005 + Charlie1 DNA MER1_type 2639 2756 -5 2209 119 0 3 chr18 27669220 27669522 -59008026 - AluSx SINE Alu -11 301 1 1598 205 0 31 chr18 27669941 27670263 -59007285 - AluJo SINE Alu 0 312 1 824 271 114 8 chr18 27670348 27670584 -59006964 - MIR SINE MIR 0 262 2 252 275 0 50 chr18 27670612 27670692 -59006856 - L2 LINE L2 -9 3263 3188 180 0 0 0 chr18 27671307 27671327 -59006221 + (T)n Simple_repeat Simple_repeat 1 20 0 288 279 183 0 chr18 27671915 27672019 -59005529 - MIR SINE MIR -97 165 43 332 22 22 0 chr18 27672165 27672210 -59005338 + (TG)n Simple_repeat Simple_repeat 1 46 0 1665 164 44 17 chr18 27672288 27672581 -59004967 - AluJb SINE Alu -11 301 1 309 114 29 14 chr18 27672694 27672764 -59004784 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 674 197 53 96 chr18 27672883 27673091 -59004457 - L1ME2 LINE L1 -10 6154 5956 1764 218 59 2 chr18 27673094 27673520 -59004028 - L1ME2 LINE L1 -263 5901 5452 285 268 24 37 chr18 27674114 27674196 -59003352 + MIR3 SINE MIR 111 191 -17 802 208 13 0 chr18 27677257 27677416 -59000132 + FRAM SINE Alu 12 172 -4 833 117 0 84 chr18 27677417 27677571 -58999977 + FLAM_C SINE Alu 3 143 0 350 323 111 41 chr18 27678380 27678721 -58998827 - MLT1K LTR MaLR -3 585 221 681 124 191 0 chr18 27679084 27679189 -58998359 + FLAM_C SINE Alu 1 125 -18 2244 106 3 3 chr18 27679825 27680127 -58997421 - AluSg SINE Alu -8 302 1 2267 84 44 0 chr18 27680133 27680430 -58997118 - AluSx SINE Alu -2 310 1 469 241 128 36 chr18 27680517 27680712 -58996836 + MLT1K LTR MaLR 368 580 -8 321 307 85 16 chr18 27681038 27681227 -58996321 + MIR3 SINE MIR 4 205 -3 758 125 0 0 chr18 27681420 27681524 -58996024 - FRAM SINE Alu -11 165 62 1550 161 0 88 chr18 27681887 27682216 -58995332 - AluJo SINE Alu -5 307 8 1093 166 36 49 chr18 27682260 27682289 -58995259 - L1PB4 LINE L1 0 6156 6128 2315 106 13 0 chr18 27682289 27682592 -58994956 + AluSx SINE Alu 1 307 -5 1093 166 36 49 chr18 27682592 27682785 -58994763 - L1PB4 LINE L1 -28 6128 5937 2787 164 68 30 chr18 27682911 27683447 -58994101 - L1MB7 LINE L1 -19 6165 5604 2336 92 3 0 chr18 27683447 27683741 -58993807 - AluSx SINE Alu -17 295 1 2787 164 68 30 chr18 27683741 27683779 -58993769 - L1MB7 LINE L1 -580 5604 5569 198 250 18 18 chr18 27683960 27684016 -58993532 + MIR SINE MIR 87 142 -120 231 278 100 0 chr18 27684129 27684219 -58993329 + L2 LINE L2 3174 3272 0 198 175 50 0 chr18 27684254 27684294 -58993254 + MIR SINE MIR 213 254 -8 305 129 4 0 chr18 27685594 27685649 -58991899 + MIR SINE MIR 74 131 -77 293 103 39 26 chr18 27687495 27687573 -58989975 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 203 243 0 27 chr18 27687908 27687982 -58989566 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 319 133 167 0 chr18 27688497 27688557 -58988991 - L1ME1 LINE L1 -48 6187 6118 482 232 72 14 chr18 27688561 27688699 -58988849 + L1M4 LINE L1 5586 5731 -453 * 2587 240 29 49 chr18 27688677 27689444 -58988104 - L1ME1 LINE L1 -117 6118 5368 1927 128 28 14 chr18 27689444 27689734 -58987814 - AluJo SINE Alu -5 307 14 2587 240 29 49 chr18 27689734 27689825 -58987723 - L1ME1 LINE L1 -867 5368 5277 2876 231 50 34 chr18 27689841 27690765 -58986783 - L1ME1 LINE L1 -2064 4151 3213 2154 192 44 10 chr18 27690797 27691277 -58986271 - L1ME1 LINE L1 -3396 2819 2324 189 0 0 0 chr18 27691305 27691326 -58986222 + (TTTCC)n Simple_repeat Simple_repeat 2 22 0 1412 147 37 138 chr18 27691334 27691661 -58985887 - AluJo SINE Alu -8 294 1 1091 242 95 142 chr18 27691745 27692699 -58984849 - L1ME1 LINE L1 -5465 931 22 191 330 111 27 chr18 27693986 27694095 -58983453 - MIR SINE MIR -61 147 36 2612 47 0 0 chr18 27694633 27694934 -58982614 + AluY SINE Alu 1 301 -10 1718 178 0 0 chr18 27695254 27695540 -58982008 - AluJb SINE Alu -26 286 1 257 265 12 24 chr18 27695677 27695760 -58981788 + MER3 DNA MER1_type 28 109 -100 2262 121 0 0 chr18 27695973 27696280 -58981268 - AluSx SINE Alu -5 307 1 1265 180 3 98 chr18 27696331 27696485 -58981063 - MER33 DNA MER1_type -2262 323 215 1604 186 25 4 chr18 27696485 27696760 -58980788 + AluJo SINE Alu 2 282 -30 1265 180 3 98 chr18 27696760 27696933 -58980615 - MER33 DNA MER1_type -2370 215 27 419 333 36 41 chr18 27697168 27697363 -58980185 - MIR SINE MIR -32 230 37 819 155 0 0 chr18 27698143 27698272 -58979276 - AluJb SINE Alu -183 129 1 3715 45 2 16 chr18 27699767 27700214 -58977334 + L1PA4 LINE L1 5712 6152 -3 255 258 192 41 chr18 27700238 27700509 -58977039 + L2 LINE L2 2622 2933 -381 649 260 121 25 chr18 27700521 27700836 -58976712 - L2 LINE L2 -1283 2031 1687 282 340 0 0 chr18 27700837 27700934 -58976614 - L2 LINE L2 -2012 1302 1206 433 310 28 21 chr18 27700984 27701126 -58976422 + MIR SINE MIR 8 150 -112 734 171 0 7 chr18 27701192 27701424 -58976124 - AluJb SINE Alu -17 295 2 2750 110 6 3 chr18 27701650 27702013 -58975535 + THE1B LTR MaLR 1 364 0 228 135 0 0 chr18 27702349 27702386 -58975162 + (CA)n Simple_repeat Simple_repeat 2 38 0 839 214 10 25 chr18 27702460 27702661 -58974887 - L1MC5 LINE L1 -161 7800 7603 2510 112 15 3 chr18 27702876 27703207 -58974341 + MER1B DNA MER1_type 3 337 0 221 260 137 0 chr18 27704164 27704237 -58973311 - L2 LINE L2 -36 3236 3154 1150 210 6 0 chr18 27704774 27704992 -58972556 + MIR SINE MIR 43 262 0 670 197 14 7 chr18 27705124 27705266 -58972282 - L2 LINE L2 -1350 1964 1822 286 288 80 15 chr18 27705801 27705950 -58971598 - LTR33A LTR ERVL -92 431 292 290 237 175 0 chr18 27705998 27706095 -58971453 + L2 LINE L2 3200 3313 0 331 307 0 51 chr18 27706284 27706421 -58971127 + MLT1L LTR MaLR 430 559 -56 581 14 27 0 chr18 27707054 27707127 -58970421 + (GAAA)n Simple_repeat Simple_repeat 2 76 0 28 0 0 0 chr18 27707427 27707455 -58970093 + AT_rich Low_complexity Low_complexity 1 28 0 31 0 0 0 chr18 27707490 27707521 -58970027 + AT_rich Low_complexity Low_complexity 1 31 0 1741 123 0 8 chr18 27707598 27707833 -58969715 - AluSg SINE Alu -77 233 1 554 157 186 29 chr18 27708257 27708397 -58969151 - MER5A DNA MER1_type -27 162 1 2058 169 47 49 chr18 27708515 27708983 -58968565 - MLT1C LTR MaLR 0 467 1 274 244 207 0 chr18 27709296 27709378 -58968170 + L2 LINE L2 3191 3289 -24 27 49 0 0 chr18 27711727 27711768 -58965780 + GC_rich Low_complexity Low_complexity 1 41 0 1271 198 170 34 chr18 27712315 27712698 -58964850 - MLT1D LTR MaLR 0 505 71 298 255 66 100 chr18 27712827 27712983 -58964565 - L1MDa LINE L1 -3648 2892 2747 1248 54 0 0 chr18 27712983 27713131 -58964417 + L1PA13 LINE L1 6008 6155 -8 298 255 66 100 chr18 27713131 27713245 -58964303 - L1MDa LINE L1 -3793 2747 2631 283 86 0 0 chr18 27713245 27713280 -58964268 - U2 snRNA snRNA -153 35 1 612 230 64 107 chr18 27713333 27713671 -58963877 - L1MC5 LINE L1 -61 7900 7596 2156 124 0 13 chr18 27713671 27713978 -58963570 - AluSx SINE Alu -9 303 1 612 230 64 107 chr18 27713978 27714217 -58963331 - L1MC5 LINE L1 -365 7596 7348 232 256 80 22 chr18 27714222 27714359 -58963189 - L1MDa LINE L1 -3941 2599 2455 2276 113 3 0 chr18 27714445 27714745 -58962803 - AluSp SINE Alu -12 301 1 1751 166 3 7 chr18 27714965 27715254 -58962294 - AluJo SINE Alu -24 288 1 248 154 66 22 chr18 27715364 27715455 -58962093 + (TTATA)n Simple_repeat Simple_repeat 4 98 0 486 251 143 5 chr18 27715459 27715662 -58961886 - HAL1 LINE L1 -882 1625 1395 968 275 128 53 chr18 27715691 27716477 -58961071 - L1MDa LINE L1 -4862 1668 824 1459 179 47 10 chr18 27716563 27716864 -58960684 - AluSx SINE Alu 0 312 1 378 0 0 0 chr18 27717152 27717194 -58960354 + (TG)n Simple_repeat Simple_repeat 2 43 0 459 220 174 9 chr18 27717194 27717303 -58960245 - FLAM_A SINE Alu -6 127 1 186 309 36 0 chr18 27717768 27717823 -58959725 + L2 LINE L2 3000 3056 -216 292 129 0 81 chr18 27717845 27717907 -58959641 - MLT2B1 LTR ERVL 0 520 464 186 133 0 0 chr18 27717907 27717937 -58959611 + (TA)n Simple_repeat Simple_repeat 1 30 0 241 152 0 0 chr18 27717949 27717995 -58959553 - LTR66 LTR ERVL -171 439 394 1426 194 46 75 chr18 27718019 27718293 -58959255 - MLT2D LTR ERVL -20 534 131 2227 112 0 0 chr18 27718293 27718588 -58958960 - AluSx SINE Alu -17 295 1 1426 194 46 75 chr18 27718588 27718716 -58958832 - MLT2D LTR ERVL -423 131 1 202 362 196 0 chr18 27718735 27718873 -58958675 + L2 LINE L2 3103 3267 -5 208 178 22 22 chr18 27719027 27719072 -58958476 - L2 LINE L2 -16 3256 3212 2668 134 10 3 chr18 27719408 27719795 -58957753 + MLT1B LTR MaLR 1 390 0 397 241 37 19 chr18 27723641 27723749 -58953799 - MER5B DNA MER1_type -64 114 5 214 325 48 36 chr18 27723929 27724012 -58953536 - MER5B DNA MER1_type -1 177 94 1961 132 13 10 chr18 27724774 27725084 -58952464 - AluSx SINE Alu -1 311 1 2262 104 3 0 chr18 27725145 27725444 -58952104 - AluSc SINE Alu -2 307 8 2029 235 108 19 chr18 27726034 27726571 -58950977 + MLT1E LTR MaLR 9 593 0 1916 154 0 0 chr18 27726671 27726957 -58950591 - AluJo SINE Alu -26 286 1 2121 107 0 13 chr18 27727002 27727302 -58950246 - AluSc SINE Alu -13 296 1 186 103 0 0 chr18 27727356 27727385 -58950163 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 181 191 24 0 chr18 27727388 27727430 -58950118 + L2 LINE L2 3271 3313 0 739 325 100 18 chr18 27728599 27728980 -58948568 + L3 LINE CR1 432 843 -734 511 305 131 23 chr18 27729347 27729606 -58947942 + L3 LINE CR1 854 1140 -437 853 333 67 29 chr18 27729615 27730093 -58947455 - L2 LINE L2 0 3313 2818 292 182 0 18 chr18 27730172 27730227 -58947321 - MIR SINE MIR -21 241 188 2059 42 0 54 chr18 27730254 27730514 -58947034 + L1PA5 LINE L1 5909 6154 0 22 35 0 0 chr18 27730558 27730587 -58946961 + AT_rich Low_complexity Low_complexity 1 29 0 517 293 53 7 chr18 27731105 27731255 -58946293 - L2 LINE L2 0 3272 3116 1485 236 113 62 chr18 27731311 27731798 -58945750 - MLT1G1 LTR MaLR 0 595 15 32 43 0 0 chr18 27731994 27732040 -58945508 + AT_rich Low_complexity Low_complexity 1 46 0 196 293 158 30 chr18 27732210 27732343 -58945205 + MIR SINE MIR 107 256 -6 658 309 27 8 chr18 27733691 27733947 -58943601 + MIR SINE MIR 2 262 0 2943 123 45 2 chr18 27734599 27735070 -58942478 - L1MB3 LINE L1 -7 6176 5686 814 158 99 136 chr18 27735090 27735362 -58942186 - MLT2B3 LTR ERVL 0 554 293 690 176 48 0 chr18 27735363 27735488 -58942060 - MLT2B3 LTR ERVL -423 131 1 2059 147 43 25 chr18 27736482 27736850 -58940698 - THE1C LTR MaLR 0 375 1 246 319 12 40 chr18 27737152 27737285 -58940263 - MIR SINE MIR -48 160 37 318 297 26 39 chr18 27737844 27737999 -58939549 - L1ME4a LINE L1 0 6121 5969 183 317 33 0 chr18 27738482 27738542 -58939006 - L2 LINE L2 -22 3250 3189 5434 94 23 10 chr18 27738892 27739688 -58937860 - L1PB2 LINE L1 0 6151 5346 1980 157 0 3 chr18 27740549 27740861 -58936687 + AluSx SINE Alu 1 311 -1 378 295 0 0 chr18 27740971 27741066 -58936482 - MIR SINE MIR -115 147 53 462 272 83 30 chr18 27741129 27741298 -58936250 - MIR SINE MIR -60 202 25 330 45 0 0 chr18 27742570 27742614 -58934934 + (CA)n Simple_repeat Simple_repeat 2 45 0 271 354 0 9 chr18 27742764 27742877 -58934671 - MER5B DNA MER1_type -62 116 5 1825 169 0 19 chr18 27744465 27744779 -58932769 + AluJo SINE Alu 1 308 -4 1024 182 11 6 chr18 27746013 27746189 -58931359 - MER5B DNA MER1_type 0 178 2 185 305 201 52 chr18 27746808 27747116 -58930432 - L2 LINE L2 -998 2316 1963 524 306 57 35 chr18 27747994 27748223 -58929325 - L3 LINE CR1 -33 1544 1311 207 69 0 0 chr18 27748703 27748732 -58928816 + (A)n Simple_repeat Simple_repeat 1 29 0 255 345 46 46 chr18 27750182 27750356 -58927192 + L2 LINE L2 3008 3181 -91 40 59 0 0 chr18 27751193 27751261 -58926287 + AT_rich Low_complexity Low_complexity 1 68 0 724 286 131 15 chr18 27751562 27751967 -58925581 - L1ME4a LINE L1 -277 5885 5434 186 71 0 0 chr18 27752249 27752277 -58925271 + (TC)n Simple_repeat Simple_repeat 2 29 0 242 158 0 0 chr18 27754753 27754791 -58922757 + tRNA-Ile-ATT tRNA tRNA 7 44 -33 1934 142 44 0 chr18 27755380 27755676 -58921872 + AluJo SINE Alu 3 311 -1 26 30 0 0 chr18 27755817 27755850 -58921698 + AT_rich Low_complexity Low_complexity 1 33 0 277 252 260 16 chr18 27755916 27756039 -58921509 - MLT1J2 LTR MaLR 0 450 298 1911 203 173 12 chr18 27756082 27756569 -58920979 - MLT1F1 LTR MaLR -2 565 1 284 261 63 45 chr18 27756853 27756964 -58920584 + L2 LINE L2 3160 3272 0 24 100 0 0 chr18 27757546 27757626 -58919922 + AT_rich Low_complexity Low_complexity 1 80 0 276 268 164 27 chr18 27757634 27758000 -58919548 - L1ME4a LINE L1 -10 6111 5696 221 277 17 17 chr18 27758116 27758235 -58919313 + T-rich Low_complexity Low_complexity 5 123 0 459 114 9 97 chr18 27758238 27758352 -58919196 - L1MA9 LINE L1 -48 6264 6161 262 200 18 0 chr18 27758352 27758407 -58919141 + CT-rich Low_complexity Low_complexity 3 58 0 922 198 31 13 chr18 27758407 27758634 -58918914 - L1MA9 LINE L1 -151 6161 5931 18387 148 18 28 chr18 27758795 27760818 -58916730 + L1MA2 LINE L1 479 2520 -5203 2363 80 7 0 chr18 27760818 27761118 -58916430 + AluY SINE Alu 1 302 -9 18387 148 18 28 chr18 27761118 27761649 -58915899 + L1MA2 LINE L1 2520 3055 -4668 2048 111 4 4 chr18 27761649 27761968 -58915580 + AluSc SINE Alu 1 319 0 18387 148 18 28 chr18 27761968 27765459 -58912089 + L1MA2 LINE L1 3055 6441 -1282 194 0 39 0 chr18 27765459 27765485 -58912063 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 18387 148 18 28 chr18 27765485 27766738 -58910810 + L1MA2 LINE L1 6441 7705 -18 183 80 0 0 chr18 27766791 27766816 -58910732 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 201 344 0 16 chr18 27766827 27766891 -58910657 - MER5B DNA MER1_type -12 166 104 544 135 7 7 chr18 27768058 27768167 -58909381 - L1MA9 LINE L1 -1 6290 6182 888 258 41 0 chr18 27770145 27770366 -58907182 + MIR SINE MIR 31 260 -2 352 266 81 35 chr18 27770700 27770873 -58906675 + MLT1K LTR MaLR 31 211 -377 191 222 0 0 chr18 27771517 27771553 -58905995 + L2 LINE L2 3222 3257 -15 1417 150 57 63 chr18 27774025 27774325 -58903223 + AluJb SINE Alu 1 298 -14 246 231 0 0 chr18 27774476 27774528 -58903020 - L2 LINE L2 0 3313 3262 194 250 0 0 chr18 27774519 27774563 -58902985 + L2 LINE L2 3262 3305 -8 * 234 350 86 0 chr18 27775289 27775406 -58902142 + MIR3 SINE MIR 34 160 -48 271 248 22 88 chr18 27775406 27775543 -58902005 + L2 LINE L2 3136 3263 -50 284 335 100 25 chr18 27775568 27775929 -58901619 - L2 LINE L2 -1228 2086 1699 2112 109 3 11 chr18 27775933 27776256 -58901292 - AluSg SINE Alu 0 321 1 5420 123 24 5 chr18 27778355 27779286 -58898262 - L1MA8 LINE L1 -4 7706 6759 5468 167 46 37 chr18 27779289 27780116 -58897432 - L1MA8 LINE L1 -2168 5397 4579 7633 22 0 0 chr18 27780116 27781349 -58896199 - L1PA4 LINE L1 -4 6151 4917 1645 148 8 0 chr18 27781350 27781586 -58895962 - AluSx SINE Alu -31 281 44 5468 167 46 37 chr18 27781586 27782100 -58895448 - L1MA8 LINE L1 -2985 4580 4042 2474 236 56 44 chr18 27782130 27783498 -58894050 - L1MA8 LINE L1 -4194 3371 2008 2338 196 20 58 chr18 27783507 27783931 -58893617 - L1MA8 LINE L1 -6460 1029 631 2237 109 0 20 chr18 27783931 27784260 -58893288 - AluSq SINE Alu 0 313 1 2338 196 20 58 chr18 27784260 27784421 -58893127 - L1MA8 LINE L1 -6857 632 466 303 279 37 22 chr18 27785219 27785355 -58892193 - L1MC/D LINE L1 -1997 5811 5674 1030 164 33 6 chr18 27785750 27785933 -58891615 + AluJo SINE Alu 122 309 -3 228 214 0 0 chr18 27785986 27786042 -58891506 + CT-rich Low_complexity Low_complexity 2 57 0 2053 118 0 7 chr18 27787593 27787921 -58889627 + AluSx SINE Alu 7 332 0 377 283 176 35 chr18 27790208 27790407 -58887141 - MIR SINE MIR -19 243 19 264 244 61 0 chr18 27792490 27792572 -58884976 + CT-rich Low_complexity Low_complexity 1 87 0 307 317 78 0 chr18 27793056 27793223 -58884325 - Charlie8 DNA MER1_type -2181 236 57 2026 132 0 13 chr18 27794484 27794788 -58882760 - AluSx SINE Alu -12 300 1 21 0 0 0 chr18 27795194 27795215 -58882333 + AT_rich Low_complexity Low_complexity 1 21 0 1825 146 3 31 chr18 27797054 27797348 -58880200 - AluJo SINE Alu -26 286 1 283 288 169 0 chr18 27797744 27797862 -58879686 - L2 LINE L2 -2 3270 3133 311 258 108 25 chr18 27798469 27798589 -58878959 + MIR SINE MIR 7 136 -126 2283 99 0 13 chr18 27798724 27799037 -58878511 - AluY SINE Alu -2 309 1 691 155 113 5 chr18 27799185 27799350 -58878198 + Ricksha DNA DNA 1 285 -1761 * 6676 131 17 40 chr18 27799349 27800584 -58876964 + Ricksha DNA DNA 1690 2895 -351 1558 142 81 9 chr18 27800648 27800971 -58876577 + Ricksha DNA DNA 2901 3246 -8 248 231 58 0 chr18 27800979 27801031 -58876517 + L2 LINE L2 3187 3241 -31 2520 71 0 3 chr18 27801040 27801349 -58876199 + AluSq SINE Alu 1 308 -5 333 287 9 19 chr18 27801382 27801490 -58876058 + MIR SINE MIR 151 257 -5 812 278 87 0 chr18 27801712 27801953 -58875595 + MIR SINE MIR 1 262 0 2501 58 0 0 chr18 27802654 27802949 -58874599 - AluY SINE Alu -16 295 1 222 271 104 35 chr18 27803296 27803440 -58874108 - L2 LINE L2 0 3313 3160 1908 275 101 38 chr18 27804693 27804783 -58872765 + HAL1 LINE L1 1 84 -2423 2785 13 0 13 chr18 27804783 27805096 -58872452 + AluYa5 SINE Alu 1 309 -2 1908 275 101 38 chr18 27805096 27805831 -58871717 + HAL1 LINE L1 84 878 -1629 656 223 74 10 chr18 27805832 27806034 -58871514 + HAL1 LINE L1 1206 1420 -1087 180 0 0 0 chr18 27806034 27806054 -58871494 + (GA)n Simple_repeat Simple_repeat 2 21 0 1266 249 199 35 chr18 27806158 27806756 -58870792 + HAL1 LINE L1 1728 2423 -84 2205 65 0 0 chr18 27806823 27807085 -58870463 - L1PA7 LINE L1 0 6154 5893 222 37 0 0 chr18 27807170 27807197 -58870351 + (GA)n Simple_repeat Simple_repeat 2 28 0 389 275 114 80 chr18 27807387 27807484 -58870064 - MLT1L LTR MaLR -18 597 505 1548 184 3 41 chr18 27807484 27807777 -58869771 + AluJo SINE Alu 11 292 -20 2043 129 0 0 chr18 27807783 27808063 -58869485 + AluSx SINE Alu 1 280 -32 284 0 28 0 chr18 27808063 27808099 -58869449 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 389 275 114 80 chr18 27808099 27808255 -58869293 - MLT1L LTR MaLR -113 502 327 1618 244 39 66 chr18 27808277 27808838 -58868710 - MLT1H LTR MaLR 0 549 4 299 314 40 32 chr18 27808884 27809008 -58868540 - MLT1L LTR MaLR -396 219 95 214 303 72 112 chr18 27809100 27809185 -58868363 - L2 LINE L2 -609 2705 2618 2777 99 11 8 chr18 27809185 27809559 -58867989 + THE1C LTR MaLR 1 375 0 858 243 63 19 chr18 27809559 27809765 -58867783 - MER20 DNA MER1_type -4 215 1 214 303 72 112 chr18 27809765 27809830 -58867718 - L2 LINE L2 -694 2620 2560 432 281 179 15 chr18 27809887 27810083 -58867465 + MER102a DNA MER1_type 103 330 0 267 167 0 50 chr18 27810227 27810287 -58867261 - L1ME4a LINE L1 0 6121 6065 396 0 0 0 chr18 27811935 27811979 -58865569 + (CA)n Simple_repeat Simple_repeat 2 45 0 43 35 0 0 chr18 27812102 27812159 -58865389 + AT_rich Low_complexity Low_complexity 1 57 0 8043 32 0 2 chr18 27812303 27813321 -58864227 + L1PA5 LINE L1 5137 6152 -2 441 317 17 0 chr18 27813669 27813789 -58863759 + MIR SINE MIR 13 134 -128 515 42 0 14 chr18 27813789 27813860 -58863688 + (TTCC)n Simple_repeat Simple_repeat 2 71 0 1906 136 30 7 chr18 27813886 27814181 -58863367 - AluSx SINE Alu -10 302 1 383 250 45 0 chr18 27814183 27814271 -58863277 + MIR SINE MIR 117 208 -54 303 304 23 58 chr18 27814718 27814889 -58862659 + MIR SINE MIR 42 206 -56 551 87 39 0 chr18 27815089 27815193 -58862355 + (TCCA)n Simple_repeat Simple_repeat 3 110 0 180 267 127 100 chr18 27815757 27815907 -58861641 - L2 LINE L2 -1 3271 3118 221 303 15 0 chr18 27818452 27818518 -58859030 - L2 LINE L2 -1 3271 3205 617 269 39 16 chr18 27821402 27821584 -58855964 + MIR SINE MIR 60 245 -17 2374 67 3 0 chr18 27821746 27822059 -58855489 - AluY SINE Alu 0 314 1 593 314 48 5 chr18 27822203 27822410 -58855138 - MIR SINE MIR -15 247 32 2107 121 10 16 chr18 27822422 27822735 -58854813 + AluJb SINE Alu 1 311 -1 2241 113 0 3 chr18 27823671 27823972 -58853576 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr18 27824322 27824343 -58853205 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr18 27824487 27824512 -58853036 + AT_rich Low_complexity Low_complexity 1 25 0 24 0 0 0 chr18 27824546 27824570 -58852978 + AT_rich Low_complexity Low_complexity 1 24 0 30 27 0 0 chr18 27826084 27826121 -58851427 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr18 27827304 27827332 -58850216 + AT_rich Low_complexity Low_complexity 1 28 0 822 231 29 0 chr18 27830829 27831002 -58846546 - MER45A DNA AcHobo 0 178 1 22 35 0 0 chr18 27833995 27834024 -58843524 + AT_rich Low_complexity Low_complexity 1 29 0 227 204 19 0 chr18 27834916 27834970 -58842578 + (ATG)n Simple_repeat Simple_repeat 2 56 0 2413 161 60 5 chr18 27835148 27835551 -58841997 + MSTB1 LTR MaLR 5 429 -3 1510 197 23 10 chr18 27835884 27836188 -58841360 + AluJo SINE Alu 1 308 -4 344 182 100 27 chr18 27836719 27836829 -58840719 - LTR67 LTR ERVL -5 552 435 744 286 24 5 chr18 27837075 27837281 -58840267 - MIR SINE MIR -51 211 2 450 311 49 64 chr18 27837541 27837810 -58839738 + L2 LINE L2 2412 2683 -631 180 0 0 0 chr18 27837810 27837830 -58839718 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1784 124 0 44 chr18 27837835 27838109 -58839439 - AluSx SINE Alu -20 292 31 450 311 49 64 chr18 27838109 27838177 -58839371 + L2 LINE L2 2687 2750 -564 722 206 90 16 chr18 27838302 27838491 -58839057 - MLT1B LTR MaLR 0 390 188 21 0 0 0 chr18 27839086 27839107 -58838441 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 27840391 27840419 -58837129 + AT_rich Low_complexity Low_complexity 1 28 0 406 321 46 36 chr18 27840592 27840872 -58836676 + L2 LINE L2 1328 1610 -1704 5006 194 56 23 chr18 27840876 27840989 -58836559 - Charlie1a DNA MER1_type -1388 1373 1265 1460 174 13 60 chr18 27840989 27841305 -58836243 - AluJo SINE Alu -1 311 11 5006 194 56 23 chr18 27841305 27842375 -58835173 - Charlie1a DNA MER1_type -1496 1265 151 2108 185 31 15 chr18 27842375 27842765 -58834783 + MSTD LTR MaLR 1 396 0 790 224 6 19 chr18 27842765 27842925 -58834623 - Charlie1a DNA MER1_type -1297 158 1 504 327 44 22 chr18 27842990 27843308 -58834240 + L2 LINE L2 1671 1995 -1319 530 289 88 10 chr18 27843314 27843518 -58834030 - MIR SINE MIR -32 230 11 487 331 86 35 chr18 27843862 27844152 -58833396 + L2 LINE L2 2968 3272 0 363 301 51 13 chr18 27844632 27844788 -58832760 - MER5A DNA MER1_type 0 189 28 1218 215 100 33 chr18 27844864 27845194 -58832354 + MLT1B LTR MaLR 1 352 -38 256 200 25 25 chr18 27845586 27845666 -58831882 + MER113 DNA MER1_type? 1 80 -441 217 216 0 0 chr18 27845669 27845706 -58831842 + (TG)n Simple_repeat Simple_repeat 2 38 0 262 175 0 0 chr18 27845834 27845874 -58831674 + MER113 DNA MER1_type? 454 493 -28 479 345 90 31 chr18 27846285 27846540 -58831008 + MER115 DNA AcHobo 164 433 -260 1458 167 117 11 chr18 27846760 27847042 -58830506 + AluJo SINE Alu 1 312 0 222 189 14 54 chr18 27847737 27847811 -58829737 - MIR SINE MIR -1 261 191 1931 169 9 11 chr18 27847994 27848344 -58829204 + L1 LINE L1 4534 4882 -1264 2512 171 102 10 chr18 27848404 27852697 -58824851 - SATR1 Satellite Satellite -2 4688 1 285 257 5 43 chr18 27852701 27852888 -58824660 + (TAA)n Simple_repeat Simple_repeat 1 180 0 21 0 0 0 chr18 27852923 27852944 -58824604 + AT_rich Low_complexity Low_complexity 1 21 0 2372 176 97 43 chr18 27852970 27854346 -58823202 + SATR1 Satellite Satellite 1 1450 -19 2996 146 4 2 chr18 27854400 27854892 -58822656 + L1 LINE L1 4883 5375 -771 893 152 12 0 chr18 27854892 27855054 -58822494 + L1MA8 LINE L1 6118 6283 -8 237 108 0 0 chr18 27856373 27856410 -58821138 + (TG)n Simple_repeat Simple_repeat 2 38 0 2226 117 3 3 chr18 27857275 27857583 -58819965 - AluSx SINE Alu -4 308 1 1464 178 95 3 chr18 27859295 27859654 -58817894 - Charlie5 DNA MER1_type 0 2624 2233 613 158 16 47 chr18 27859654 27859781 -58817767 - Charlie5 DNA MER1_type -2489 123 1 283 270 88 7 chr18 27860161 27860298 -58817250 - L1ME4a LINE L1 -4 6117 5970 5681 171 39 101 chr18 27860343 27860705 -58816843 + Charlie1a DNA MER1_type 18 401 -2360 2209 23 50 0 chr18 27860705 27860965 -58816583 - AluY SINE Alu -4 307 35 5681 171 39 101 chr18 27860965 27862135 -58815413 + Charlie1a DNA MER1_type 401 1455 0 332 291 22 44 chr18 27862241 27862349 -58815199 - L1ME4a LINE L1 -152 5969 5865 4985 83 22 8 chr18 27862349 27862988 -58814560 - L1PA11 LINE L1 0 6174 5527 332 291 22 44 chr18 27862988 27863061 -58814487 - L1ME4a LINE L1 -256 5865 5792 420 286 121 0 chr18 27864348 27864488 -58813060 - MIR3 SINE MIR -23 185 29 1902 159 0 3 chr18 27864496 27864791 -58812757 - AluSx SINE Alu -18 294 1 460 118 0 0 chr18 27864816 27864884 -58812664 + MSTD LTR MaLR 329 396 0 290 265 105 31 chr18 27865361 27865523 -58812025 - HERVL LTR ERVL -5063 591 418 2007 194 19 14 chr18 27865868 27866281 -58811267 + MLT1C LTR MaLR 53 467 0 412 234 63 46 chr18 27866676 27866851 -58810697 - LTR33A LTR ERVL -336 187 10 2928 106 0 11 chr18 27867019 27867398 -58810150 - THE1C LTR MaLR 0 375 1 10725 111 33 44 chr18 27867398 27868996 -58808552 - THE1C-int LTR MaLR 0 1580 1 2883 109 0 5 chr18 27868997 27869373 -58808175 - THE1C LTR MaLR -1 374 1 259 328 26 7 chr18 27870340 27870468 -58807080 - L2 LINE L2 -306 2966 2839 441 251 126 37 chr18 27870944 27871135 -58806413 - MIR SINE MIR -40 222 15 572 332 77 45 chr18 27871459 27872125 -58805423 - L2 LINE L2 -597 2717 2031 1645 166 44 23 chr18 27872239 27872570 -58804978 + L1MB3 LINE L1 5793 6133 -50 2135 106 0 7 chr18 27872570 27872862 -58804686 + AluSc SINE Alu 1 290 -19 1645 166 44 23 chr18 27872862 27872874 -58804674 + L1MB3 LINE L1 6133 6143 -40 276 127 18 18 chr18 27872909 27872964 -58804584 + L1MB2 LINE L1 6115 6169 -2 26 0 0 0 chr18 27872998 27873024 -58804524 + AT_rich Low_complexity Low_complexity 1 26 0 335 250 0 0 chr18 27873111 27873187 -58804361 - MER116 DNA Mariner -4 76 1 283 371 33 20 chr18 27873742 27873893 -58803655 - MER5A DNA MER1_type -11 178 26 389 79 0 16 chr18 27874192 27874255 -58803293 + (GGA)n Simple_repeat Simple_repeat 1 62 0 334 318 54 7 chr18 27874854 27875002 -58802546 - MER102a DNA MER1_type 0 330 176 356 238 50 40 chr18 27875044 27875145 -58802403 - MER102a DNA MER1_type -226 104 3 196 283 38 0 chr18 27875166 27875219 -58802329 + MIR3 SINE MIR 100 154 -54 363 23 0 0 chr18 27876808 27876852 -58800696 + (CA)n Simple_repeat Simple_repeat 2 45 0 601 229 46 64 chr18 27876988 27877206 -58800342 + MIR SINE MIR 44 257 -5 444 248 83 8 chr18 27882645 27882766 -58794782 - L2 LINE L2 -523 2791 2662 202 211 0 28 chr18 27882909 27882980 -58794568 + (TA)n Simple_repeat Simple_repeat 1 69 0 209 329 12 35 chr18 27882985 27883070 -58794478 + L2 LINE L2 3231 3313 0 3025 76 0 8 chr18 27883296 27883663 -58793885 - THE1B LTR MaLR 0 364 1 348 340 165 24 chr18 27884149 27884646 -58792902 + L2 LINE L2 256 822 -2492 626 238 96 71 chr18 27884744 27885067 -58792481 + L2 LINE L2 2983 3313 0 370 336 14 14 chr18 27885350 27885490 -58792058 + MER5A DNA MER1_type 50 189 0 228 35 0 0 chr18 27886105 27886134 -58791414 + (CAT)n Simple_repeat Simple_repeat 1 29 0 2160 109 0 0 chr18 27887063 27887369 -58790179 - AluSx SINE Alu 0 306 1 248 380 14 58 chr18 27887475 27887683 -58789865 - L2 LINE L2 -21 3292 3094 392 280 37 9 chr18 27889358 27889465 -58788083 - L2 LINE L2 -2 3270 3161 314 252 130 16 chr18 27889800 27889923 -58787625 - MIR3 SINE MIR -63 145 9 515 321 6 6 chr18 27890014 27890179 -58787369 + MIR SINE MIR 11 175 -87 219 276 0 57 chr18 27890399 27890504 -58787044 + A-rich Low_complexity Low_complexity 1 99 0 250 306 27 45 chr18 27891016 27891127 -58786421 - MIR SINE MIR -68 140 32 5980 122 31 25 chr18 27891710 27892673 -58784875 - LTR5 LTR ERVK 0 969 1 874 254 35 4 chr18 27892937 27893169 -58784379 - LTR16C LTR ERVL 0 491 253 182 214 48 0 chr18 27893370 27893412 -58784136 + MIR SINE MIR 104 147 -115 223 259 0 35 chr18 27893787 27893845 -58783703 + MIR SINE MIR 179 234 -28 225 0 0 0 chr18 27895362 27895387 -58782161 + (GGGTG)n Simple_repeat Simple_repeat 3 27 0 779 313 87 34 chr18 27898084 27898658 -58778890 - L2 LINE L2 -3 3310 2692 2634 48 0 0 chr18 27898658 27898967 -58778581 - AluY SINE Alu -2 309 1 779 313 87 34 chr18 27898967 27899098 -58778450 - L2 LINE L2 -621 2692 2569 240 355 0 19 chr18 27901903 27902010 -58775538 + MIR SINE MIR 3 107 -155 301 293 161 29 chr18 27902055 27902229 -58775319 + MIR SINE MIR 42 238 -24 269 240 155 39 chr18 27902292 27902421 -58775127 + MIR SINE MIR 87 230 -32 506 229 0 0 chr18 27903947 27904043 -58773505 - Zaphod DNA AcHobo 0 4031 3936 232 208 50 133 chr18 27904758 27904878 -58772670 + MER5A DNA MER1_type 80 189 0 1685 209 111 12 chr18 27905157 27905582 -58771966 + MLT1C LTR MaLR 1 467 0 2316 98 3 0 chr18 27907262 27907557 -58769991 + AluSc SINE Alu 1 296 -13 3250 178 29 5 chr18 27909625 27910301 -58767247 - L1MD3 LINE L1 -1 7994 5555 477 275 42 78 chr18 27910598 27910907 -58766641 - L2 LINE L2 -201 3112 2815 5220 79 3 1 chr18 27911023 27911783 -58765765 - L1PA7 LINE L1 -1063 5083 4323 6871 55 19 0 chr18 27911783 27912835 -58764713 + L1PA7 LINE L1 5086 6154 0 414 267 85 18 chr18 27913049 27913214 -58764334 + MIR SINE MIR 21 196 -66 656 204 9 0 chr18 27913832 27913970 -58763578 + FLAM_A SINE Alu 1 139 0 2050 173 85 15 chr18 27914081 27914550 -58762998 + MLT1D LTR MaLR 4 505 0 181 333 22 80 chr18 27914648 27914786 -58762762 - MIR SINE MIR -80 182 53 3203 122 4 0 chr18 27914827 27915309 -58762239 + L1PB2 LINE L1 5665 6148 -3 300 298 99 8 chr18 27917155 27917276 -58760272 - L2 LINE L2 -4 3268 3137 242 304 0 65 chr18 27918114 27918206 -58759342 - L2 LINE L2 0 3272 3187 264 288 98 23 chr18 27918759 27918891 -58758657 + L2 LINE L2 2526 2667 -647 547 303 128 39 chr18 27918914 27919373 -58758175 + L2 LINE L2 2805 3304 -9 24 0 0 0 chr18 27920422 27920446 -58757102 + AT_rich Low_complexity Low_complexity 1 24 0 2140 112 0 55 chr18 27920448 27920760 -58756788 + AluSg SINE Alu 2 296 -14 334 143 0 24 chr18 27920760 27920844 -58756704 + (TA)n Simple_repeat Simple_repeat 1 82 0 230 267 13 0 chr18 27920877 27920952 -58756596 + (TA)n Simple_repeat Simple_repeat 2 77 0 196 167 19 111 chr18 27921704 27921758 -58755790 + MIR SINE MIR 97 145 -63 2159 130 3 0 chr18 27922307 27922615 -58754933 - AluSx SINE Alu 0 312 4 259 292 88 24 chr18 27922627 27922761 -58754787 + MIR SINE MIR 53 201 -7 5753 121 29 7 chr18 27922815 27923913 -58753635 + L1PA16 LINE L1 5042 6157 -9 227 356 140 25 chr18 27923945 27924181 -58753367 - L2 LINE L2 -206 3066 2804 978 48 79 0 chr18 27925006 27925132 -58752416 - MER85 DNA T2_type -3 136 1 556 225 33 0 chr18 27925143 27925263 -58752285 - AluSg/x SINE Alu -51 261 138 208 303 226 7 chr18 27925403 27925558 -58751990 - MIR SINE MIR -3 259 71 1592 211 10 3 chr18 27925857 27926160 -58751388 - AluJo SINE Alu -7 305 1 249 348 77 70 chr18 27926306 27926565 -58750983 - L2 LINE L2 0 3272 3012 258 258 39 96 chr18 27926582 27926726 -58750822 + LTR33 LTR ERVL 304 432 -89 2113 135 0 0 chr18 27926726 27927022 -58750526 - AluSx SINE Alu -15 297 2 258 258 39 96 chr18 27927022 27927106 -58750442 + LTR33 LTR ERVL 432 519 -2 305 222 211 0 chr18 27927495 27927585 -58749963 - L2 LINE L2 -2 3311 3203 678 327 11 34 chr18 27928089 27928355 -58749193 + MIR SINE MIR 3 262 0 539 328 39 15 chr18 27929930 27930134 -58747414 + MIR SINE MIR 23 231 -31 23 54 0 0 chr18 27931295 27931332 -58746216 + AT_rich Low_complexity Low_complexity 1 37 0 355 269 69 60 chr18 27931751 27932100 -58745448 - L1MC4a LINE L1 -1850 5958 5607 2193 125 43 39 chr18 27932100 27932650 -58744898 + MLT2A2 LTR ERVL 1 554 0 281 179 53 53 chr18 27932721 27932810 -58744738 - L1MC4a LINE L1 -611 5553 5462 333 328 21 38 chr18 27933152 27933338 -58744210 - L1MC4a LINE L1 -1082 5064 4882 2410 66 0 13 chr18 27933433 27933734 -58743814 - AluY SINE Alu -14 297 1 261 0 0 0 chr18 27933809 27933838 -58743710 + (TG)n Simple_repeat Simple_repeat 2 30 0 659 253 64 54 chr18 27933938 27934235 -58743313 - L2 LINE L2 -5 3308 3009 334 375 120 18 chr18 27934280 27934664 -58742884 + L2 LINE L2 2329 2751 -563 608 264 13 123 chr18 27934770 27934874 -58742674 - MIR SINE MIR -19 243 178 1955 136 3 0 chr18 27934874 27935160 -58742388 - AluJb SINE Alu -25 287 1 608 264 13 123 chr18 27935160 27935290 -58742258 - MIR SINE MIR -84 178 35 184 318 108 91 chr18 27935306 27935668 -58741880 + L2 LINE L2 2895 3262 -10 291 322 0 0 chr18 27935789 27935876 -58741672 - L2 LINE L2 -4 3268 3182 913 269 30 27 chr18 27935877 27936242 -58741306 - MLT1I LTR MaLR -6 403 38 656 255 99 78 chr18 27936292 27936507 -58741041 - L2 LINE L2 -84 3229 3020 2278 104 0 0 chr18 27936507 27936814 -58740734 + AluSx SINE Alu 1 307 -5 656 255 99 78 chr18 27936814 27937221 -58740327 - L2 LINE L2 -293 3020 2571 689 312 149 34 chr18 27937306 27937797 -58739751 + L2 LINE L2 2761 3313 0 1271 124 78 23 chr18 27937913 27938130 -58739418 - MER30 DNA MER1_type 0 230 2 2245 116 3 6 chr18 27939097 27939408 -58738140 - AluSx SINE Alu -2 310 1 274 284 67 10 chr18 27939417 27939522 -58738026 - MIR SINE MIR -64 144 40 1786 187 3 19 chr18 27939712 27940091 -58737457 - L1PB4 LINE L1 -2 6154 5782 326 303 0 0 chr18 27940091 27940180 -58737368 + L1MC4 LINE L1 6615 6703 -1339 380 137 41 0 chr18 27940187 27940260 -58737288 - L1P5 LINE L1 -365 5791 5716 290 254 44 44 chr18 27940260 27940374 -58737174 - LTR16A1 LTR ERVL -164 293 180 297 227 94 47 chr18 27940804 27940932 -58736616 - MIR3 SINE MIR -72 136 3 213 94 0 0 chr18 27941860 27941892 -58735656 + (A)n Simple_repeat Simple_repeat 1 32 0 306 50 0 0 chr18 27942698 27942738 -58734810 + (TG)n Simple_repeat Simple_repeat 1 40 0 404 284 43 43 chr18 27943028 27943207 -58734341 + MIR SINE MIR 17 191 -24 220 27 54 0 chr18 27943435 27943472 -58734076 + (TTTTA)n Simple_repeat Simple_repeat 1 39 0 304 255 146 14 chr18 27943655 27943867 -58733681 - L1ME4a LINE L1 -1 6120 5881 237 295 105 0 chr18 27944098 27944193 -58733355 + L2 LINE L2 3201 3305 -8 265 273 92 128 chr18 27944531 27944780 -58732768 + L2 LINE L2 3032 3271 -1 487 299 72 70 chr18 27946219 27946564 -58730984 + L2 LINE L2 2476 2821 -493 272 279 54 101 chr18 27946935 27947064 -58730484 - L2 LINE L2 -5 3267 3145 211 330 43 53 chr18 27947323 27947417 -58730131 - L2 LINE L2 -90 3182 3090 834 227 21 46 chr18 27947625 27947696 -58729852 - MER5A DNA MER1_type 0 189 118 1992 177 81 8 chr18 27947696 27948091 -58729457 + MSTA LTR MaLR 5 428 0 834 227 21 46 chr18 27948091 27948213 -58729335 - MER5A DNA MER1_type -71 118 1 309 325 147 5 chr18 27948518 27948709 -58728839 + MIR SINE MIR 32 249 -13 1549 264 85 22 chr18 27948718 27949730 -58727818 + L1ME3A LINE L1 4890 5967 -203 5214 256 79 21 chr18 27949730 27951442 -58726106 + L1ME1 LINE L1 35 1646 -4569 2527 168 27 5 chr18 27951442 27951889 -58725659 + MSTB2 LTR MaLR 1 457 0 5214 256 79 21 chr18 27951889 27952070 -58725478 + L1ME1 LINE L1 1646 1815 -4400 1730 186 25 27 chr18 27952070 27952436 -58725112 + MLT1A1 LTR MaLR 1 365 0 5214 256 79 21 chr18 27952436 27953583 -58723965 + L1ME1 LINE L1 1815 3210 -3005 2579 204 61 48 chr18 27953568 27954118 -58723430 + L1ME1 LINE L1 5254 5795 -444 * 1817 160 55 0 chr18 27954118 27954411 -58723137 + AluSx SINE Alu 1 309 -3 2579 204 61 48 chr18 27954411 27954699 -58722849 + L1ME1 LINE L1 5795 6076 -163 321 105 0 0 chr18 27954699 27954756 -58722792 + L1MA10 LINE L1 6277 6333 -1 2579 204 61 48 chr18 27954756 27954909 -58722639 + L1ME1 LINE L1 6076 6225 -14 2898 256 141 24 chr18 27955360 27956491 -58721057 - L2 LINE L2 -427 2887 1625 239 253 142 56 chr18 27956522 27956684 -58720864 + LTR67 LTR ERVL 42 217 -340 423 248 19 19 chr18 27956794 27956899 -58720649 + L2 LINE L2 3168 3272 0 1971 164 20 64 chr18 27958246 27958654 -58718894 - MLT1B LTR MaLR 0 390 1 1150 241 129 120 chr18 27958925 27959044 -58718504 + MLT1F1 LTR MaLR 3 119 -448 1935 154 4 0 chr18 27959044 27959323 -58718225 - AluSx SINE Alu -32 280 1 1150 241 129 120 chr18 27959323 27959582 -58717966 + MLT1F1 LTR MaLR 119 415 -152 2257 77 0 48 chr18 27959582 27959892 -58717656 + AluY SINE Alu 7 301 -10 1150 241 129 120 chr18 27959892 27960047 -58717501 + MLT1F1 LTR MaLR 415 567 0 1138 130 81 5 chr18 27960728 27960913 -58716635 + MSTB LTR MaLR 1 199 -227 344 305 224 9 chr18 27961439 27961649 -58715899 + MIR SINE MIR 7 261 -1 2080 112 32 32 chr18 27962878 27963190 -58714358 + AluSx SINE Alu 1 312 0 22 35 0 0 chr18 27963721 27963750 -58713798 + AT_rich Low_complexity Low_complexity 1 29 0 29 70 0 0 chr18 27964009 27964066 -58713482 + AT_rich Low_complexity Low_complexity 1 57 0 438 65 0 0 chr18 27965057 27965119 -58712429 + (TCTA)n Simple_repeat Simple_repeat 3 64 0 337 259 82 0 chr18 27965374 27965459 -58712089 - Charlie7 DNA MER1_type -2520 92 1 429 280 140 27 chr18 27966499 27966649 -58710899 - MER91A DNA MER1_type -26 170 4 21 0 0 0 chr18 27966659 27966680 -58710868 + AT_rich Low_complexity Low_complexity 1 21 0 2136 150 40 3 chr18 27966837 27967184 -58710364 + MER47A DNA MER2_type 7 366 0 23 0 0 0 chr18 27967498 27967521 -58710027 + AT_rich Low_complexity Low_complexity 1 23 0 180 235 118 82 chr18 27967672 27967757 -58709791 - MIR SINE MIR -91 117 30 24 0 0 0 chr18 27968783 27968807 -58708741 + AT_rich Low_complexity Low_complexity 1 24 0 560 278 66 5 chr18 27969568 27969766 -58707782 + MIR SINE MIR 51 260 -2 320 141 0 0 chr18 27970070 27970132 -58707416 - MIR SINE MIR -41 167 105 28 0 0 0 chr18 27970669 27970697 -58706851 + AT_rich Low_complexity Low_complexity 1 28 0 240 214 0 0 chr18 27971395 27971451 -58706097 + (TG)n Simple_repeat Simple_repeat 1 56 0 668 330 138 39 chr18 27971955 27972771 -58704777 - L2 LINE L2 -1116 2198 1302 201 189 57 0 chr18 27973323 27973376 -58704172 + T-rich Low_complexity Low_complexity 5 60 0 377 365 24 6 chr18 27974939 27975109 -58702439 + MIR SINE MIR 20 192 -70 233 297 30 20 chr18 27975407 27975508 -58702040 + MER5A DNA MER1_type 88 189 0 22 35 0 0 chr18 27975659 27975688 -58701860 + AT_rich Low_complexity Low_complexity 1 29 0 2660 142 21 30 chr18 27976604 27977040 -58700508 - Tigger2a DNA MER2_type -2 432 1 187 272 86 37 chr18 27977461 27977542 -58700006 + MIR SINE MIR 29 113 -95 953 96 0 7 chr18 27978789 27978925 -58698623 + Alu SINE Alu 176 310 0 324 0 0 0 chr18 27979767 27979803 -58697745 + (TG)n Simple_repeat Simple_repeat 1 36 0 426 295 216 8 chr18 27980710 27981066 -58696482 + L2 LINE L2 2836 3265 -48 530 180 0 11 chr18 27981638 27981727 -58695821 + Tigger5 DNA MER2_type 2234 2321 -2 1580 199 48 102 chr18 27981727 27982249 -58695299 + L1ME2 LINE L1 5669 6162 -2 225 94 0 0 chr18 27984133 27984165 -58693383 + (A)n Simple_repeat Simple_repeat 1 32 0 917 237 0 17 chr18 27986250 27986427 -58691121 - FAM SINE Alu -1 174 1 408 374 7 0 chr18 27986535 27986682 -58690866 - MIR SINE MIR -92 170 23 24 32 0 0 chr18 27987704 27987735 -58689813 + AT_rich Low_complexity Low_complexity 1 31 0 21 57 0 0 chr18 27988976 27989011 -58688537 + AT_rich Low_complexity Low_complexity 1 35 0 273 113 73 27 chr18 27989494 27989644 -58687904 + (TA)n Simple_repeat Simple_repeat 2 158 0 24 0 0 0 chr18 27991453 27991477 -58686071 + AT_rich Low_complexity Low_complexity 1 24 0 263 315 37 19 chr18 27992023 27992131 -58685417 - MIR SINE MIR 0 262 153 2212 108 0 49 chr18 27992333 27992657 -58684891 - AluSg SINE Alu -2 308 1 2306 81 0 3 chr18 27992995 27993291 -58684257 - AluY SINE Alu -16 295 1 1735 207 36 6 chr18 27993962 27994296 -58683252 + MER2 DNA MER2_type 1 344 0 183 214 0 24 chr18 27995457 27995499 -58682049 - MIR SINE MIR -49 213 173 524 287 124 10 chr18 27996353 27996555 -58680993 - MIR SINE MIR -34 228 4 217 150 0 25 chr18 27996938 27996978 -58680570 + (TTCC)n Simple_repeat Simple_repeat 3 41 0 528 314 113 0 chr18 27997116 27997345 -58680203 - MIR SINE MIR 0 262 8 188 376 0 11 chr18 27997497 27997590 -58679958 + MIR3 SINE MIR 111 202 -6 497 341 100 22 chr18 27998084 27998495 -58679053 + L2 LINE L2 2149 2591 -723 1168 284 122 27 chr18 27998523 27999219 -58678329 + L2 LINE L2 2303 3067 -246 415 298 29 6 chr18 28001975 28002135 -58675413 - MIR SINE MIR -34 174 2 1842 158 0 0 chr18 28003756 28004028 -58673520 + AluJb SINE Alu 29 300 -12 2248 179 20 0 chr18 28004028 28004420 -58673128 + MER70B LTR ERVL 70 469 -109 227 211 0 19 chr18 28006295 28006347 -58671201 - 7SLRNA srpRNA srpRNA -65 255 205 1391 210 15 43 chr18 28006447 28006776 -58670772 - MLT1A2 LTR MaLR -54 320 1 2053 123 0 7 chr18 28007865 28008194 -58669354 - AluSx SINE Alu 0 327 1 228 310 50 10 chr18 28008256 28008356 -58669192 + L2 LINE L2 2228 2331 -983 4930 121 56 6 chr18 28010090 28011022 -58666526 + L1PA13 LINE L1 5176 6159 -4 558 246 0 9 chr18 28011027 28011141 -58666407 - FLAM_A SINE Alu -17 116 4 787 246 64 0 chr18 28011155 28011342 -58666206 + MER74A LTR ERVL 28 226 -332 451 362 15 41 chr18 28011442 28011713 -58665835 - L3 LINE CR1 -63 1514 1251 573 319 40 26 chr18 28011813 28011952 -58665596 + L1ME LINE L1 5258 5394 -768 753 189 0 0 chr18 28011952 28012084 -58665464 + FLAM_C SINE Alu 1 132 -1 573 319 40 26 chr18 28012084 28012449 -58665099 + L1ME LINE L1 5394 5769 -393 183 283 19 0 chr18 28012989 28013042 -58664506 - MIR SINE MIR -162 100 47 2129 104 10 39 chr18 28013503 28013811 -58663737 + AluSq SINE Alu 4 302 -11 230 191 103 71 chr18 28014020 28014101 -58663447 + L1MC/D LINE L1 5351 5439 -2369 2258 112 7 3 chr18 28014101 28014405 -58663143 + AluSg SINE Alu 1 305 -5 230 191 103 71 chr18 28014405 28014449 -58663099 + L1MC/D LINE L1 5439 5480 -2328 846 222 14 32 chr18 28014699 28014920 -58662628 - L1M4 LINE L1 -1984 4162 3946 789 146 46 91 chr18 28014963 28015182 -58662366 - L1MC1 LINE L1 -28 6305 6097 2182 106 3 0 chr18 28015183 28015467 -58662081 - AluSx SINE Alu -27 285 1 367 313 69 37 chr18 28015467 28015697 -58661851 - L1MEd LINE L1 -1329 1161 878 250 241 0 35 chr18 28016005 28016063 -58661485 - L2 LINE L2 -25 3247 3192 616 211 91 10 chr18 28016210 28016419 -58661129 + L1M4 LINE L1 2922 3147 -2999 1753 133 22 66 chr18 28016473 28016790 -58660758 + AluJo SINE Alu 1 303 -9 282 287 147 0 chr18 28016791 28016920 -58660628 + L1M4 LINE L1 3236 3383 -2763 1248 91 6 11 chr18 28016942 28017118 -58660430 + AluSg/x SINE Alu 121 295 -17 243 258 167 0 chr18 28017276 28017342 -58660206 + MIR3 SINE MIR 111 187 -21 22 0 0 0 chr18 28019365 28019387 -58658161 + AT_rich Low_complexity Low_complexity 1 22 0 2320 113 0 0 chr18 28020606 28020906 -58656642 + AluSx SINE Alu 1 300 -12 24 53 0 0 chr18 28021162 28021200 -58656348 + AT_rich Low_complexity Low_complexity 1 38 0 1644 166 3 48 chr18 28022236 28022550 -58654998 + AluJo SINE Alu 1 300 -12 476 343 0 0 chr18 28022581 28022727 -58654821 - L2 LINE L2 -246 3067 2922 2153 114 3 3 chr18 28022730 28023028 -58654520 + AluSg SINE Alu 1 298 -12 716 248 93 5 chr18 28023033 28023247 -58654301 - MLT1H LTR MaLR -1 548 316 390 225 0 11 chr18 28023401 28023490 -58654058 - Tigger5 DNA MER2_type -2 2321 2234 246 343 20 0 chr18 28024067 28024166 -58653382 - L2 LINE L2 -48 3224 3124 184 364 131 6 chr18 28024233 28024409 -58653139 - L2 LINE L2 -267 3046 2849 221 381 0 10 chr18 28025575 28025672 -58651876 + MIR SINE MIR 3 98 -164 203 313 159 40 chr18 28025725 28025901 -58651647 + MIR SINE MIR 42 238 -24 254 239 65 43 chr18 28025964 28026056 -58651492 + MIR SINE MIR 87 180 -82 385 203 0 13 chr18 28026409 28026488 -58651060 - MER82 DNA MER2_type -127 526 449 321 300 113 27 chr18 28026524 28026674 -58650874 + MIR SINE MIR 1 163 -99 415 229 0 0 chr18 28026765 28026848 -58650700 - MER82 DNA MER2_type -557 96 14 2024 151 135 3 chr18 28027066 28027444 -58650104 + MSTA LTR MaLR 1 428 0 12024 62 5 1 chr18 28028822 28030488 -58647060 + L1P LINE L1 2882 4553 -1593 186 330 125 0 chr18 28030682 28030770 -58646778 + MIR SINE MIR 110 208 -54 218 205 0 0 chr18 28031011 28031050 -58646498 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 356 261 45 0 chr18 28031050 28031138 -58646410 + L1MC4 LINE L1 6614 6705 -1337 251 0 0 0 chr18 28031468 28031497 -58646051 - L1P LINE L1 -753 5419 5391 2955 69 2 17 chr18 28031497 28031879 -58645669 + L1PA8 LINE L1 5775 6161 -11 1276 61 6 6 chr18 28031879 28032059 -58645489 + (GAA)n Simple_repeat Simple_repeat 1 180 0 528 16 0 0 chr18 28032059 28032120 -58645428 + (GGAGAA)n Simple_repeat Simple_repeat 1 61 0 2955 69 2 17 chr18 28032120 28032140 -58645408 + L1PA8 LINE L1 6159 6172 0 185 297 54 81 chr18 28032170 28032392 -58645156 + L2 LINE L2 2423 2638 -676 328 294 44 144 chr18 28032574 28032914 -58644634 + L2 LINE L2 2941 3246 -26 647 223 16 72 chr18 28033516 28033709 -58643839 - AluJo SINE Alu -46 266 85 223 329 25 13 chr18 28034249 28034328 -58643220 - L2 LINE L2 0 3313 3234 322 331 79 8 chr18 28034428 28034555 -58642993 - L2 LINE L2 -205 3067 2932 1489 234 150 7 chr18 28034776 28035216 -58642332 + MLT1D LTR MaLR 1 503 -2 23 0 0 0 chr18 28035298 28035321 -58642227 + AT_rich Low_complexity Low_complexity 1 23 0 5399 236 16 7 chr18 28036038 28037672 -58639876 + L1PA15-16 LINE L1 2817 4466 -2383 2639 71 8 0 chr18 28037772 28038151 -58639397 - L1P LINE L1 -3142 3004 2623 * 4553 169 34 13 chr18 28038148 28039059 -58638489 - L1P LINE L1 -5213 933 4 269 357 20 6 chr18 28039878 28040041 -58637507 - MIR SINE MIR -56 152 42 355 176 0 0 chr18 28040498 28040566 -58636982 + L1PA15-16 LINE L1 2721 2788 -4061 210 105 0 0 chr18 28042038 28042076 -58635472 + (A)n Simple_repeat Simple_repeat 1 38 0 318 189 54 14 chr18 28042316 28042464 -58635084 + (TA)n Simple_repeat Simple_repeat 2 155 0 351 296 197 7 chr18 28044193 28044345 -58633203 - MER5A DNA MER1_type 0 189 9 180 272 61 61 chr18 28044760 28044874 -58632674 - L3 LINE CR1 -929 648 535 22 0 0 0 chr18 28046001 28046023 -58631525 + AT_rich Low_complexity Low_complexity 1 22 0 2819 138 45 14 chr18 28046023 28046580 -58630968 - L1MB3 LINE L1 -1 6182 5609 515 204 45 6 chr18 28046708 28046884 -58630664 - Charlie5 DNA MER1_type -27 2585 2403 * 945 235 23 4 chr18 28046882 28047142 -58630406 - Charlie5 DNA MER1_type -2347 265 1 2124 119 28 0 chr18 28047163 28047448 -58630100 - AluSx SINE Alu -17 295 3 22 0 0 0 chr18 28047855 28047877 -58629671 + AT_rich Low_complexity Low_complexity 1 22 0 1825 160 0 35 chr18 28047986 28048305 -58629243 - AluJb SINE Alu -2 310 3 584 155 26 17 chr18 28048819 28048935 -58628613 + L1MB1 LINE L1 6051 6167 -1 1403 136 29 15 chr18 28049677 28049950 -58627598 - L1MA9 LINE L1 0 6312 6036 921 165 0 6 chr18 28049953 28050123 -58627425 - L1MA9 LINE L1 -357 5955 5787 211 132 73 0 chr18 28050127 28050195 -58627353 + (TA)n Simple_repeat Simple_repeat 1 73 0 528 113 0 0 chr18 28050237 28050317 -58627231 - L1MA9 LINE L1 -554 5780 5701 2306 137 2 19 chr18 28050317 28050742 -58626806 + L1MA9 LINE L1 5267 5684 -628 1055 295 120 25 chr18 28050939 28051636 -58625912 - L2 LINE L2 -246 3067 2303 348 311 121 32 chr18 28051695 28052042 -58625506 - L2 LINE L2 -756 2558 2181 186 376 0 11 chr18 28052571 28052664 -58624884 - MIR3 SINE MIR -6 202 111 207 0 0 0 chr18 28053655 28053678 -58623870 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 23 0 0 0 chr18 28054430 28054453 -58623095 + AT_rich Low_complexity Low_complexity 1 23 0 307 229 177 0 chr18 28056456 28056552 -58620996 + MER45A DNA AcHobo 53 165 -13 200 196 71 71 chr18 28056785 28056841 -58620707 - L2 LINE L2 -3 3310 3255 483 266 126 48 chr18 28056978 28057392 -58620156 + LTR33A LTR ERVL 1 446 -77 1354 187 50 15 chr18 28058177 28058514 -58619034 + L1MB3 LINE L1 5834 6182 -1 22 0 0 0 chr18 28058514 28058536 -58619012 + AT_rich Low_complexity Low_complexity 1 22 0 259 250 0 73 chr18 28061051 28061119 -58616429 + MIR SINE MIR 46 108 -154 802 179 94 60 chr18 28061166 28061367 -58616181 + MER63A DNA MER1_type 1 208 -2 304 335 122 0 chr18 28061368 28061556 -58615992 + MIR SINE MIR 46 256 -6 490 356 92 59 chr18 28061609 28062787 -58614761 + L2 LINE L2 1711 2927 -387 326 375 64 47 chr18 28062848 28063144 -58614404 + L2 LINE L2 2935 3235 -37 1359 198 65 112 chr18 28064834 28065198 -58612350 - MLT1F LTR MaLR -30 512 178 1440 208 13 33 chr18 28065198 28065501 -58612047 - AluJo SINE Alu -11 301 5 1359 198 65 112 chr18 28065501 28065656 -58611892 - MLT1F LTR MaLR -364 178 17 1242 248 14 17 chr18 28066839 28067190 -58610358 - L1 LINE L1 -3370 2776 2427 26 30 0 0 chr18 28068223 28068256 -58609292 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr18 28068295 28068319 -58609229 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr18 28069214 28069247 -58608301 + (CA)n Simple_repeat Simple_repeat 2 34 0 229 233 97 58 chr18 28069480 28069583 -58607965 - MIR3 SINE MIR -100 108 2 281 359 168 0 chr18 28070374 28070583 -58606965 + L3 LINE CR1 1333 1576 -1 6835 61 4 13 chr18 28070894 28071845 -58605703 + L1PA6 LINE L1 4551 5480 -674 2265 84 0 3 chr18 28071845 28072143 -58605405 + AluY SINE Alu 3 299 -12 6835 61 4 13 chr18 28072143 28072809 -58604739 + L1PA6 LINE L1 5480 6150 -4 2415 80 3 0 chr18 28073262 28073564 -58603984 + AluSc SINE Alu 1 303 -6 450 350 145 0 chr18 28075299 28075513 -58602035 + MIR SINE MIR 18 262 0 5693 131 5 0 chr18 28075671 28076790 -58600758 - L1PA15 LINE L1 -2 6163 5035 5006 221 12 12 chr18 28076801 28078115 -58599433 + L1P LINE L1 2640 3953 -2193 21 57 0 0 chr18 28078643 28078678 -58598870 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr18 28079836 28079859 -58597689 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 602 213 0 57 chr18 28080716 28080857 -58596691 + FLAM_C SINE Alu 1 133 0 327 342 40 0 chr18 28080929 28081078 -58596470 - MIR SINE MIR -71 191 37 374 305 86 37 chr18 28084043 28084230 -58593318 + MIR SINE MIR 8 203 -59 1802 140 27 26 chr18 28084326 28084392 -58593156 - MER84 LTR ERVI 0 507 443 6359 37 1 0 chr18 28084392 28085151 -58592397 + L1PA5 LINE L1 5394 6153 -1 1802 140 27 26 chr18 28085151 28085526 -58592022 - MER84 LTR ERVI -64 443 5 374 317 201 26 chr18 28085544 28085888 -58591660 - MER115 DNA AcHobo -258 435 32 475 88 15 0 chr18 28086172 28086240 -58591308 - MER84 LTR ERVI -438 69 1 791 197 0 0 chr18 28086389 28086516 -58591032 + FLAM_A SINE Alu 1 127 -6 685 248 101 87 chr18 28088425 28088918 -58588630 - MLT1H1 LTR MaLR -12 543 44 398 311 40 7 chr18 28090726 28090874 -58586674 - MIR SINE MIR -57 205 53 263 314 186 0 chr18 28090916 28091110 -58586438 + MIR SINE MIR 20 249 -13 23 0 0 0 chr18 28091258 28091281 -58586267 + AT_rich Low_complexity Low_complexity 1 23 0 234 0 0 0 chr18 28091350 28091376 -58586172 + (CA)n Simple_repeat Simple_repeat 2 27 0 192 274 0 20 chr18 28091765 28091816 -58585732 + MIR SINE MIR 43 92 -116 229 213 0 25 chr18 28092396 28092476 -58585072 + (TA)n Simple_repeat Simple_repeat 2 79 0 788 318 85 31 chr18 28094998 28095572 -58581976 - L2 LINE L2 -3 3310 2692 2608 48 0 0 chr18 28095572 28095881 -58581667 - AluY SINE Alu -2 309 1 788 318 85 31 chr18 28095881 28096012 -58581536 - L2 LINE L2 -621 2692 2569 248 355 0 19 chr18 28098817 28098924 -58578624 + MIR SINE MIR 3 107 -155 312 293 161 29 chr18 28098969 28099143 -58578405 + MIR SINE MIR 42 238 -24 276 240 155 39 chr18 28099206 28099335 -58578213 + MIR SINE MIR 87 230 -32 182 354 93 9 chr18 28100396 28100622 -58576926 - L2 LINE L2 -65 3248 3004 464 229 0 0 chr18 28100858 28100954 -58576594 - Zaphod DNA AcHobo 0 4031 3936 228 250 33 117 chr18 28101669 28101789 -58575759 + MER5A DNA MER1_type 80 189 0 1491 209 111 12 chr18 28102068 28102493 -58575055 + MLT1C LTR MaLR 1 467 0 2316 98 3 0 chr18 28104173 28104468 -58573080 + AluSc SINE Alu 1 296 -13 3226 179 29 5 chr18 28106533 28107209 -58570339 - L1MD3 LINE L1 -1 7994 5555 5208 80 3 1 chr18 28107997 28108757 -58568791 - L1PA7 LINE L1 -1063 5083 4323 6871 55 19 0 chr18 28108757 28109809 -58567739 + L1PA7 LINE L1 5086 6154 0 424 267 85 18 chr18 28110023 28110188 -58567360 + MIR SINE MIR 21 196 -66 559 210 10 0 chr18 28110806 28110944 -58566604 + FLAM_A SINE Alu 1 139 0 2288 164 87 17 chr18 28111055 28111524 -58566024 + MLT1D LTR MaLR 4 505 0 3434 124 4 0 chr18 28111801 28112283 -58565265 + L1PB2 LINE L1 5665 6148 -3 292 298 99 8 chr18 28114127 28114248 -58563300 - L2 LINE L2 -4 3268 3137 236 304 0 65 chr18 28115087 28115179 -58562369 - L2 LINE L2 0 3272 3187 263 288 98 23 chr18 28115732 28115864 -58561684 + L2 LINE L2 2526 2667 -647 500 305 128 39 chr18 28115887 28116346 -58561202 + L2 LINE L2 2805 3304 -9 24 0 0 0 chr18 28117394 28117418 -58560130 + AT_rich Low_complexity Low_complexity 1 24 0 2102 113 0 55 chr18 28117420 28117729 -58559819 + AluSg SINE Alu 2 293 -17 180 0 0 0 chr18 28117729 28117749 -58559799 + (T)n Simple_repeat Simple_repeat 1 20 0 224 258 15 0 chr18 28117858 28117924 -58559624 + (TA)n Simple_repeat Simple_repeat 2 68 0 196 167 19 111 chr18 28118676 28118730 -58558818 + MIR SINE MIR 97 145 -63 2179 127 3 0 chr18 28119282 28119590 -58557958 - AluSx SINE Alu 0 312 4 229 286 98 24 chr18 28119602 28119735 -58557813 + MIR SINE MIR 53 201 -7 6224 120 31 9 chr18 28119779 28120888 -58556660 + L1PA16 LINE L1 5029 6157 -9 238 286 218 20 chr18 28120920 28121067 -58556481 - L2 LINE L2 -206 3066 2891 1050 48 79 0 chr18 28121981 28122107 -58555441 - MER85 DNA T2_type -3 136 1 597 225 33 0 chr18 28122118 28122238 -58555310 - AluSg/x SINE Alu -51 261 138 204 303 226 7 chr18 28122379 28122534 -58555014 - MIR SINE MIR -3 259 71 1261 167 134 30 chr18 28122840 28123109 -58554439 - AluJo SINE Alu -15 297 1 479 345 90 31 chr18 28123329 28123584 -58553964 - MER115 DNA AcHobo -260 433 164 262 175 0 0 chr18 28123995 28124035 -58553513 - MER113 DNA MER1_type? -28 493 454 217 216 0 0 chr18 28124163 28124200 -58553348 + (CA)n Simple_repeat Simple_repeat 2 38 0 256 200 25 25 chr18 28124203 28124283 -58553265 - MER113 DNA MER1_type? -441 80 1 1347 196 135 3 chr18 28124675 28124811 -58552737 - MLT1B LTR MaLR -38 352 235 297 0 0 0 chr18 28124811 28124844 -58552704 + (GA)n Simple_repeat Simple_repeat 1 33 0 1347 196 135 3 chr18 28124844 28125018 -58552530 - MLT1B LTR MaLR -155 235 1 363 301 51 13 chr18 28125094 28125250 -58552298 + MER5A DNA MER1_type 28 189 0 487 331 86 35 chr18 28125726 28126016 -58551532 - L2 LINE L2 0 3272 2968 530 289 88 10 chr18 28126360 28126564 -58550984 + MIR SINE MIR 11 230 -32 504 327 44 22 chr18 28126570 28126888 -58550660 - L2 LINE L2 -1319 1995 1671 805 217 6 19 chr18 28126953 28127113 -58550435 + Charlie1a DNA MER1_type 1 158 -1297 2120 185 31 15 chr18 28127113 28127503 -58550045 - MSTD LTR MaLR 0 396 1 * 4829 196 57 7 chr18 28127503 28128566 -58548982 + Charlie1a DNA MER1_type 151 1267 -188 1435 177 13 60 chr18 28128573 28128889 -58548659 + AluJo SINE Alu 11 311 -1 282 202 55 28 chr18 28128893 28129002 -58548546 + Charlie1a DNA MER1_type 1262 1373 -82 406 321 46 36 chr18 28129006 28129286 -58548262 - L2 LINE L2 -1704 1610 1328 21 36 0 0 chr18 28129459 28129487 -58548061 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr18 28130771 28130792 -58546756 + AT_rich Low_complexity Low_complexity 1 21 0 722 206 90 16 chr18 28131387 28131576 -58545972 + MLT1B LTR MaLR 188 390 0 450 311 49 64 chr18 28131701 28131769 -58545779 - L2 LINE L2 -564 2750 2683 1784 124 0 44 chr18 28131769 28132043 -58545505 + AluSx SINE Alu 31 292 -20 180 0 0 0 chr18 28132048 28132068 -58545480 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 450 311 49 64 chr18 28132068 28132337 -58545211 - L2 LINE L2 -635 2679 2412 744 286 24 5 chr18 28132597 28132803 -58544745 + MIR SINE MIR 2 211 -51 344 182 100 27 chr18 28133049 28133159 -58544389 + LTR67 LTR ERVL 435 552 -5 1510 197 23 10 chr18 28133689 28133993 -58543555 - AluJo SINE Alu -4 308 1 2572 160 24 7 chr18 28134326 28134744 -58542804 - MSTB1 LTR MaLR -3 429 5 227 204 19 0 chr18 28134922 28134976 -58542572 + (CAT)n Simple_repeat Simple_repeat 2 56 0 22 35 0 0 chr18 28135868 28135897 -58541651 + AT_rich Low_complexity Low_complexity 1 29 0 822 231 29 0 chr18 28138889 28139062 -58538486 + MER45A DNA AcHobo 1 178 0 727 266 33 0 chr18 28141722 28141966 -58535582 + L1ME1 LINE L1 2910 3161 -2985 * 2908 202 62 53 chr18 28141937 28142487 -58535061 + L1ME1 LINE L1 5185 5728 -442 1776 164 55 0 chr18 28142487 28142780 -58534768 + AluSx SINE Alu 1 309 -3 2908 202 62 53 chr18 28142780 28143068 -58534480 + L1ME1 LINE L1 5728 6006 -164 349 105 0 0 chr18 28143068 28143125 -58534423 + L1MA10 LINE L1 6277 6333 -1 2908 202 62 53 chr18 28143125 28143281 -58534267 + L1ME1 LINE L1 6006 6159 -11 1598 269 137 33 chr18 28143729 28144465 -58533083 - L2 LINE L2 -427 2887 2075 353 271 0 0 chr18 28144464 28144549 -58532999 + L2 LINE L2 3188 3272 0 * 1952 167 20 64 chr18 28145896 28146304 -58531244 - MLT1B LTR MaLR 0 390 1 311 244 70 12 chr18 28146579 28146665 -58530883 + MLT1F1 LTR MaLR 7 97 -496 1935 154 4 0 chr18 28146694 28146973 -58530575 - AluSx SINE Alu -32 280 1 571 263 205 15 chr18 28146973 28147232 -58530316 + MLT1F1 LTR MaLR 89 396 -171 1392 73 5 78 chr18 28147232 28147437 -58530111 + AluY SINE Alu 7 196 -115 4064 171 55 48 chr18 28247438 28248127 -58429421 + L1MB7 LINE L1 4747 5430 -754 1653 170 11 4 chr18 28248127 28248398 -58429150 + AluJo SINE Alu 1 273 -39 4064 171 55 48 chr18 28248398 28248701 -58428847 + L1MB7 LINE L1 5430 5730 -454 2001 134 38 30 chr18 28248701 28249073 -58428475 - THE1C LTR MaLR 0 375 1 4064 171 55 48 chr18 28249073 28249502 -58428046 + L1MB7 LINE L1 5730 6184 0 313 330 112 29 chr18 28249522 28249728 -58427820 + L3b LINE CR1 1360 1582 -1 1887 156 71 6 chr18 28250131 28250470 -58427078 - MLT1A1 LTR MaLR 0 365 5 2425 80 0 0 chr18 28250732 28251032 -58426516 - AluY SINE Alu -11 300 1 21 0 0 0 chr18 28251168 28251189 -58426359 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 28251294 28251316 -58426232 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr18 28251323 28251359 -58426189 + (CA)n Simple_repeat Simple_repeat 2 37 0 1548 170 77 0 chr18 28251359 28251659 -58425889 + MER46B DNA MER2_type 4 201 -35 530 145 0 0 chr18 28251680 28251756 -58425792 + MLT2B1 LTR ERVL 375 450 -70 219 216 26 0 chr18 28251756 28251872 -58425676 + (TA)n Simple_repeat Simple_repeat 2 120 0 2026 192 113 5 chr18 28251873 28252305 -58425243 - MLT2B1 LTR ERVL -41 479 1 913 192 33 0 chr18 28252943 28253125 -58424423 - MER5A DNA MER1_type 0 189 2 273 220 0 0 chr18 28253194 28253253 -58424295 + MLT1L LTR MaLR 196 254 -361 2513 121 18 3 chr18 28255603 28255992 -58421556 - L1PA13 LINE L1 0 6163 5769 7574 30 0 0 chr18 28256000 28257036 -58420512 - L1PA4 LINE L1 -3 6152 5117 1882 211 15 13 chr18 28257136 28257614 -58419934 - L1M4 LINE L1 -1433 4713 4235 2295 169 59 16 chr18 28257848 28258339 -58419209 - L1MC1 LINE L1 -6 6327 5816 612 224 18 36 chr18 28260125 28260138 -58417410 + L1MD3 LINE L1 7826 7838 -157 1912 184 60 52 chr18 28260138 28260639 -58416909 - MLT1D LTR MaLR 0 505 1 612 224 18 36 chr18 28260639 28260790 -58416758 + L1MD3 LINE L1 7838 7987 -8 234 258 16 0 chr18 28261914 28261976 -58415572 + GA-rich Low_complexity Low_complexity 3 65 0 456 311 69 42 chr18 28262172 28262461 -58415087 + L1MEd LINE L1 865 1161 -4958 1738 118 9 1 chr18 28262466 28262743 -58414805 + L1PA12 LINE L1 5593 5870 -298 2311 31 3 0 chr18 28262745 28263033 -58414515 + L1P LINE L1 5086 5374 -772 26169 31 1 1 chr18 28263133 28266300 -58411248 + L1P LINE L1 1820 4985 -1161 23 0 0 0 chr18 28266530 28266553 -58410995 + AT_rich Low_complexity Low_complexity 1 23 0 1035 242 87 68 chr18 28267549 28267849 -58409699 - MLT1D LTR MaLR 0 505 191 357 24 0 0 chr18 28267849 28267891 -58409657 + (TG)n Simple_repeat Simple_repeat 1 42 0 1035 242 87 68 chr18 28267891 28268086 -58409462 - MLT1D LTR MaLR -314 191 1 241 309 106 27 chr18 28268209 28268397 -58409151 + MLT1K LTR MaLR 316 518 -70 241 248 20 69 chr18 28268504 28268605 -58408943 - MIR SINE MIR -1 261 166 764 250 53 53 chr18 28268990 28269101 -58408447 + MIR SINE MIR 4 114 -148 2128 126 10 10 chr18 28269101 28269410 -58408138 + AluSx SINE Alu 1 309 -3 764 250 53 53 chr18 28269410 28269542 -58408006 + MIR SINE MIR 113 247 -15 230 319 0 0 chr18 28269562 28269634 -58407914 + L2 LINE L2 3242 3313 0 198 300 17 0 chr18 28269705 28269765 -58407783 - L2 LINE L2 -6 3266 3206 807 341 10 26 chr18 28269817 28270122 -58407426 - L3 LINE CR1 -220 1357 1058 1485 185 53 7 chr18 28270889 28271170 -58406378 + ERVL LTR ERVL 1922 2215 -3549 231 368 18 0 chr18 28271283 28271397 -58406151 + MIR3 SINE MIR 71 186 -22 418 335 45 66 chr18 28272492 28272871 -58404677 - MLT1K LTR MaLR -89 499 129 1753 152 22 38 chr18 28272994 28273310 -58404238 + AluJb SINE Alu 2 312 0 606 223 36 2 chr18 28273538 28273671 -58403877 - MIR SINE MIR -63 145 52 246 295 60 71 chr18 28273671 28273854 -58403694 - MER5A DNA MER1_type -3 186 6 244 254 110 81 chr18 28274280 28274489 -58403059 + L2 LINE L2 3098 3312 -1 3674 155 18 13 chr18 28275888 28276648 -58400900 + L1MC1 LINE L1 5130 5897 -436 244 260 42 42 chr18 28278614 28278710 -58398838 - L2 LINE L2 -31 3241 3146 443 336 138 41 chr18 28278837 28280392 -58397156 - L2 LINE L2 -367 2947 1242 2397 85 0 0 chr18 28280580 28280885 -58396663 - AluSg SINE Alu -5 305 1 1742 166 30 0 chr18 28281685 28281746 -58395802 - AluSx SINE Alu 0 312 254 207 0 0 0 chr18 28281746 28281769 -58395779 + (CAGTG)n Simple_repeat Simple_repeat 1 23 0 1742 166 30 0 chr18 28281769 28282002 -58395546 - AluSx SINE Alu -58 254 9 192 345 36 0 chr18 28282367 28282422 -58395126 + MIR SINE MIR 41 97 -111 191 339 17 0 chr18 28282865 28282924 -58394624 - MIR3 SINE MIR -5 203 144 542 296 40 20 chr18 28282931 28283257 -58394291 + L1ME2 LINE L1 5659 5907 -257 1424 152 27 54 chr18 28283491 28283585 -58393963 + MER49 LTR ERV1 1 96 -827 2239 108 0 6 chr18 28283585 28283899 -58393649 + AluSx SINE Alu 1 312 0 1424 152 27 54 chr18 28283899 28284100 -58393448 + MER49 LTR ERV1 96 288 -635 774 182 0 42 chr18 28284223 28284415 -58393133 + AluY SINE Alu 113 296 -15 623 322 145 27 chr18 28284423 28284940 -58392608 + L2 LINE L2 2716 3307 -6 2900 148 17 23 chr18 28285261 28285780 -58391768 + MER34 LTR ERV1 27 542 0 201 328 0 0 chr18 28285901 28285965 -58391583 - L2 LINE L2 -5 3308 3245 224 299 63 39 chr18 28286201 28286328 -58391220 - L2 LINE L2 -948 2366 2237 231 292 0 28 chr18 28286839 28286911 -58390637 + MIR SINE MIR 23 92 -170 3106 232 78 45 chr18 28286916 28288252 -58389296 - HAL1 LINE L1 -150 2357 978 204 97 0 0 chr18 28288277 28288308 -58389240 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 39579 44 50 2 chr18 28288532 28294390 -58383158 + L1PA4 LINE L1 3 6155 0 257 290 56 28 chr18 28294448 28294555 -58382993 - HAL1 LINE L1 -2396 111 2 342 296 116 41 chr18 28296497 28296669 -58380879 - L2 LINE L2 -602 2712 2528 384 274 0 10 chr18 28296695 28296797 -58380751 - L2 LINE L2 -936 2378 2278 2127 236 107 4 chr18 28296841 28297384 -58380164 + MLT1E1 LTR MaLR 56 654 0 316 157 0 0 chr18 28297384 28297435 -58380113 - L2 LINE L2 -1052 2262 2212 481 278 70 15 chr18 28297459 28297718 -58379830 + L1M4 LINE L1 2418 2690 -3456 2334 68 7 16 chr18 28297720 28298028 -58379520 - AluY SINE Alu -6 305 1 248 222 0 81 chr18 28298033 28298132 -58379416 + L1ME3 LINE L1 5860 5950 -212 733 302 83 11 chr18 28298304 28298569 -58378979 + MLT1J2 LTR MaLR 125 408 -42 25 95 0 0 chr18 28298676 28298750 -58378798 + AT_rich Low_complexity Low_complexity 1 74 0 402 253 127 6 chr18 28299434 28299592 -58377956 + HAL1b LINE L1 561 737 -611 35 24 0 0 chr18 28301209 28301251 -58376297 + AT_rich Low_complexity Low_complexity 1 42 0 2768 257 72 25 chr18 28301938 28303054 -58374494 - L1MC4 LINE L1 0 8042 6875 257 343 142 56 chr18 28303846 28304787 -58372761 - L2 LINE L2 -3 3269 2249 214 162 0 0 chr18 28305564 28305601 -58371947 + A-rich Low_complexity Low_complexity 1 37 0 205 258 10 10 chr18 28307122 28307200 -58370348 + (TA)n Simple_repeat Simple_repeat 2 82 -16 207 0 0 0 chr18 28307200 28307223 -58370325 + (TC)n Simple_repeat Simple_repeat 2 24 0 205 258 10 10 chr18 28307223 28307241 -58370307 + (TA)n Simple_repeat Simple_repeat 81 98 0 244 184 92 13 chr18 28308373 28308449 -58369099 + MER20B DNA MER1_type 519 600 -183 312 217 33 11 chr18 28308484 28308576 -58368972 + MER20B DNA MER1_type 688 781 -2 577 253 30 24 chr18 28308738 28308904 -58368644 + MIR3 SINE MIR 19 185 -23 2282 100 0 7 chr18 28311208 28311517 -58366031 + AluSp SINE Alu 2 308 -5 26 0 0 0 chr18 28311620 28311646 -58365902 + AT_rich Low_complexity Low_complexity 1 26 0 1990 110 29 0 chr18 28313090 28313400 -58364148 + AluSx SINE Alu 1 318 0 613 191 0 0 chr18 28313567 28313677 -58363871 - AluJb SINE Alu -7 305 196 225 59 29 0 chr18 28313851 28313885 -58363663 + (TTTA)n Simple_repeat Simple_repeat 2 168 0 1752 154 0 34 chr18 28313885 28314172 -58363376 - AluJb SINE Alu -9 303 6 1861 56 0 0 chr18 28314604 28314835 -58362713 - L1PA8 LINE L1 -3 6169 5939 22 0 0 0 chr18 28314962 28314984 -58362564 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 28315032 28315053 -58362495 + AT_rich Low_complexity Low_complexity 1 21 0 1216 207 5 0 chr18 28316324 28316546 -58361002 - MER58A DNA MER1_type -1 223 1 186 43 0 0 chr18 28316808 28316831 -58360717 + (T)n Simple_repeat Simple_repeat 1 23 0 1592 133 0 0 chr18 28316957 28317183 -58360365 - AluSq SINE Alu -6 307 82 2372 70 0 22 chr18 28317184 28317496 -58360052 - AluY SINE Alu -6 305 1 547 135 0 62 chr18 28317496 28317592 -58359956 - AluJ/FLAM SINE Alu -220 92 3 219 254 0 18 chr18 28317825 28317875 -58359673 + L2 LINE L2 3210 3259 -9 240 35 0 0 chr18 28317875 28317904 -58359644 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 518 267 124 32 chr18 28318186 28318403 -58359145 - MIR SINE MIR -2 260 24 261 322 11 11 chr18 28318436 28318523 -58359025 - MIR SINE MIR -98 164 78 25 0 0 0 chr18 28319048 28319073 -58358475 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr18 28319133 28319154 -58358394 + AT_rich Low_complexity Low_complexity 1 21 0 882 290 28 8 chr18 28319687 28319935 -58357613 + MIR SINE MIR 10 262 0 236 352 48 48 chr18 28320244 28320369 -58357179 - L2 LINE L2 -2 3311 3187 495 0 0 0 chr18 28321218 28321273 -58356275 + (CA)n Simple_repeat Simple_repeat 2 56 0 205 206 33 22 chr18 28321273 28321365 -58356183 + (TAAA)n Simple_repeat Simple_repeat 1 93 0 539 222 24 8 chr18 28321890 28322016 -58355532 - MIR SINE MIR -18 244 117 887 230 11 5 chr18 28322426 28322613 -58354935 - MER5A DNA MER1_type -1 188 1 352 248 201 7 chr18 28322626 28322775 -58354773 + MER5A DNA MER1_type 6 183 -6 208 207 134 12 chr18 28322787 28322869 -58354679 - MER5B DNA MER1_type 0 178 87 551 250 8 0 chr18 28322869 28322989 -58354559 - MER5B DNA MER1_type -57 121 1 1279 178 21 21 chr18 28323391 28323677 -58353871 - L1MA8 LINE L1 -3 6288 6003 207 0 0 0 chr18 28324089 28324112 -58353436 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 530 299 115 31 chr18 28324735 28325023 -58352525 + L2 LINE L2 2945 3256 -57 204 40 0 0 chr18 28326411 28326436 -58351112 + (CCCCAG)n Simple_repeat Simple_repeat 1 25 0 270 95 0 0 chr18 28326659 28326701 -58350847 + (CCCCCG)n Simple_repeat Simple_repeat 4 45 0 741 194 0 0 chr18 28327326 28327465 -58350083 + FRAM SINE Alu 1 40 0 830 206 29 10 chr18 28327903 28328107 -58349441 - L1MB2 LINE L1 -41 6130 5923 567 88 22 0 chr18 28328109 28328200 -58349348 + L1M LINE L1 5254 5346 -837 241 47 47 0 chr18 28329683 28329726 -58347822 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 319 226 38 38 chr18 28330314 28330420 -58347128 + MIR3 SINE MIR 92 197 -11 21 57 0 0 chr18 28331058 28331093 -58346455 + AT_rich Low_complexity Low_complexity 1 35 0 187 224 69 0 chr18 28331219 28331277 -58346271 + L2 LINE L2 3250 3311 -2 399 89 0 0 chr18 28332033 28332089 -58345459 + (TG)n Simple_repeat Simple_repeat 2 57 0 2321 62 0 20 chr18 28333430 28333734 -58343814 + AluY SINE Alu 1 298 -13 743 210 156 70 chr18 28334004 28334194 -58343354 + MER97c DNA MER1_type? 349 578 -512 2430 96 0 0 chr18 28334194 28334496 -58343052 - AluY SINE Alu -9 302 1 743 210 156 70 chr18 28334496 28334619 -58342929 + MER97c DNA MER1_type? 578 689 -401 312 250 0 0 chr18 28334629 28334697 -58342851 + MER97a DNA MER1_type? 801 868 -26 22 35 0 0 chr18 28334798 28334827 -58342721 + AT_rich Low_complexity Low_complexity 1 29 0 3969 102 0 19 chr18 28334827 28335002 -58342546 - L1PB1 LINE L1 -12 6139 5962 2397 104 0 0 chr18 28335002 28335311 -58342237 - AluSq SINE Alu -4 309 1 3969 102 0 19 chr18 28335311 28335724 -58341824 - L1PB1 LINE L1 -189 5962 5562 3046 98 39 11 chr18 28335724 28336122 -58341426 + MLT2A2 LTR ERVL 1 414 -39 564 15 0 0 chr18 28336122 28336187 -58341361 + (TA)n Simple_repeat Simple_repeat 1 65 0 3046 98 39 11 chr18 28336187 28336229 -58341319 + MLT2A2 LTR ERVL 414 453 0 10055 109 2 1 chr18 28336229 28337691 -58339857 + HERVL-A2 LTR ERVL 1 1464 -4190 12230 118 97 15 chr18 28337691 28340467 -58337081 - L1PBa LINE L1 -3230 3632 634 1136 162 0 0 chr18 28340467 28340665 -58336883 - L1PBa LINE L1 -6663 200 3 240 86 0 0 chr18 28340737 28340772 -58336776 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1181 133 0 28 chr18 28340796 28340950 -58336598 - AluSg/x SINE Alu -12 298 148 5408 66 133 0 chr18 28340950 28341679 -58335869 - LTR12 LTR ERV1 0 826 1 1181 133 0 28 chr18 28341679 28341704 -58335844 - AluSg/x SINE Alu -162 148 124 732 192 0 0 chr18 28341704 28341829 -58335719 - FLAM_C SINE Alu -8 125 1 22 0 0 0 chr18 28341841 28341863 -58335685 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr18 28341969 28341990 -58335558 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2694 109 31 3 chr18 28342077 28342461 -58335087 + MER48 LTR ERV1 4 398 0 3222 158 30 40 chr18 28343712 28344435 -58333113 - LTR8A LTR ERV1 -2 725 10 2213 100 0 0 chr18 28344474 28344763 -58332785 - AluSg SINE Alu -21 289 1 857 152 0 0 chr18 28344774 28344899 -58332649 - AluJb SINE Alu -187 125 1 491 269 53 83 chr18 28344901 28345481 -58332067 - L1M4 LINE L1 -841 5305 4743 471 238 66 88 chr18 28345593 28345909 -58331639 - L1M4 LINE L1 -1473 4673 4351 2221 72 0 7 chr18 28345909 28346199 -58331349 - AluY SINE Alu -18 293 6 471 238 66 88 chr18 28346199 28346282 -58331266 - L1M4 LINE L1 -1795 4351 4268 2205 112 0 22 chr18 28346282 28346594 -58330954 - AluY SINE Alu -6 305 1 471 238 66 88 chr18 28346594 28346803 -58330745 - L1M4 LINE L1 -1878 4268 4078 1330 146 91 117 chr18 28346884 28347344 -58330204 + LTR7 LTR ERV1 1 448 -2 3162 89 18 0 chr18 28347546 28347994 -58329554 - LTR10C LTR ERV1 0 591 136 518 131 65 52 chr18 28347999 28348152 -58329396 - LTR7 LTR ERV1 -8 442 288 1898 165 10 7 chr18 28348622 28348931 -58328617 + AluJb SINE Alu 1 310 -2 2506 120 33 10 chr18 28349027 28349418 -58328130 + L1PB2 LINE L1 5750 6149 -2 206 156 22 0 chr18 28349504 28349549 -58327999 + (TA)n Simple_repeat Simple_repeat 2 47 0 654 313 131 17 chr18 28349567 28350114 -58327434 - L2 LINE L2 -1 3312 2703 1819 145 7 25 chr18 28350172 28350455 -58327093 - AluJo SINE Alu -24 288 11 189 0 0 0 chr18 28351198 28351219 -58326329 + (A)n Simple_repeat Simple_repeat 1 21 0 727 286 68 64 chr18 28351733 28352201 -58325347 + LTR33 LTR ERVL 1 470 -51 1472 205 4 11 chr18 28352298 28352566 -58324982 + AluJo SINE Alu 34 299 -13 468 338 84 57 chr18 28352717 28353253 -58324295 - L2 LINE L2 -178 3094 2550 24 0 0 0 chr18 28353738 28353762 -58323786 + AT_rich Low_complexity Low_complexity 1 24 0 228 255 0 0 chr18 28354902 28354949 -58322599 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 1926 156 42 0 chr18 28354959 28355292 -58322256 + MER7A DNA MER2_type 2 346 0 2098 213 48 29 chr18 28355692 28355978 -58321570 - MLT1E3 LTR MaLR -54 570 291 201 39 0 0 chr18 28355978 28356004 -58321544 + (TG)n Simple_repeat Simple_repeat 1 26 0 1706 173 4 0 chr18 28356011 28356282 -58321266 - AluJb SINE Alu -30 282 11 2098 213 48 29 chr18 28356282 28356328 -58321220 - MLT1E3 LTR MaLR -338 286 242 189 0 0 0 chr18 28356328 28356349 -58321199 + (TC)n Simple_repeat Simple_repeat 2 22 0 2098 213 48 29 chr18 28356349 28356566 -58320982 - MLT1E3 LTR MaLR -382 242 1 2331 96 0 10 chr18 28357170 28357484 -58320064 + AluSx SINE Alu 1 311 -1 2104 116 3 10 chr18 28360217 28360510 -58317038 + AluSx SINE Alu 1 291 -21 1399 175 37 72 chr18 28360788 28361165 -58316383 - MLT1A1 LTR MaLR 0 365 2 306 257 29 0 chr18 28361835 28361905 -58315643 - MIR3 SINE MIR -23 185 114 508 259 97 57 chr18 28364645 28365020 -58312528 + L1MC4a LINE L1 5574 5961 -1847 2297 91 0 3 chr18 28365033 28365318 -58312230 + AluSg SINE Alu 1 284 -26 24 0 0 0 chr18 28365319 28365343 -58312205 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr18 28365531 28365556 -58311992 + AT_rich Low_complexity Low_complexity 1 25 0 945 254 78 54 chr18 28365757 28365981 -58311567 + LTR16C LTR ERVL 149 385 -106 2126 109 0 3 chr18 28365981 28366275 -58311273 - AluSg SINE Alu -1 309 17 945 254 78 54 chr18 28366275 28366385 -58311163 + LTR16C LTR ERVL 385 491 0 938 339 86 38 chr18 28366630 28367548 -58310000 + ERVL LTR ERVL 362 1323 -3673 292 111 63 16 chr18 28367576 28367639 -58309909 - MER53 DNA DNA -84 105 40 234 0 0 0 chr18 28367643 28367669 -58309879 + (TG)n Simple_repeat Simple_repeat 1 26 0 1448 335 71 23 chr18 28367711 28369226 -58308322 + ERVL LTR ERVL 1329 3012 -2473 433 375 19 3 chr18 28369220 28369532 -58308016 + ERVL LTR ERVL 4329 4645 -1119 * 472 183 17 8 chr18 28369545 28369665 -58307883 + LTR16C LTR ERVL 367 487 -4 2121 130 16 24 chr18 28370443 28370813 -58306735 - THE1C LTR MaLR -8 367 1 287 98 0 0 chr18 28370898 28370939 -58306609 + L1MA5 LINE L1 6045 6085 -215 205 302 0 0 chr18 28370983 28371026 -58306522 + L2 LINE L2 3217 3259 -13 233 233 67 17 chr18 28371264 28371324 -58306224 - L3 LINE CR1 -136 1441 1379 2412 92 7 0 chr18 28371341 28371646 -58305902 + AluSg SINE Alu 1 307 -3 611 246 30 18 chr18 28371776 28371943 -58305605 + MER97c DNA MER1_type? 1 169 -921 1988 174 19 10 chr18 28371948 28372362 -58305186 + L1MA5A LINE L1 5857 6274 -23 2510 46 0 7 chr18 28372364 28372669 -58304879 + AluYa5 SINE Alu 1 303 -8 33276 39 31 2 chr18 28372769 28377086 -58300462 - L1P LINE L1 -1701 4445 4 332 321 18 18 chr18 28377382 28377491 -58300057 - MIR SINE MIR -143 119 11 349 283 75 91 chr18 28377634 28378193 -58299355 - L1M4 LINE L1 -1786 4360 3811 507 278 18 17 chr18 28378288 28378428 -58299120 - MIR SINE MIR -73 135 1 226 295 0 51 chr18 28380453 28380531 -58297017 + L2 LINE L2 2982 3055 -217 263 298 132 0 chr18 28381535 28381649 -58295899 + L2 LINE L2 3185 3313 0 25 0 0 0 chr18 28382819 28382844 -58294704 + AT_rich Low_complexity Low_complexity 1 25 0 311 245 43 21 chr18 28383519 28383613 -58293935 + MIR SINE MIR 93 188 -74 191 35 0 35 chr18 28383657 28383686 -58293862 + (TTA)n Simple_repeat Simple_repeat 2 29 0 256 264 146 14 chr18 28383718 28383862 -58293686 + L1ME3A LINE L1 5005 5167 -979 1905 238 103 39 chr18 28383936 28383983 -58293565 + L1ME3A LINE L1 5288 5331 -839 2396 84 0 3 chr18 28383983 28384282 -58293266 + AluY SINE Alu 2 299 -12 1905 238 103 39 chr18 28384282 28384764 -58292784 + L1ME3A LINE L1 5331 5888 -282 8012 136 12 2 chr18 28384764 28386051 -58291497 + HSMAR2 DNA Mariner 1 1300 -2 1905 238 103 39 chr18 28386051 28386318 -58291230 + L1ME3A LINE L1 5888 6136 -34 214 148 19 56 chr18 28387182 28387236 -58290312 + T-rich Low_complexity Low_complexity 3 54 0 2054 122 0 20 chr18 28387347 28387650 -58289898 + AluSx SINE Alu 1 297 -15 444 259 78 0 chr18 28388726 28388842 -58288706 - L2 LINE L2 -1 3312 3188 269 206 0 32 chr18 28389044 28389107 -58288441 + MLT1G1 LTR MaLR 1 61 -534 1815 165 4 0 chr18 28389108 28389380 -58288168 - AluJb SINE Alu -23 289 17 4400 95 33 21 chr18 28389410 28390085 -58287463 - L1PB1 LINE L1 -1 6150 5468 244 347 0 0 chr18 28390120 28390195 -58287353 + MLT1G1 LTR MaLR 73 147 -408 1772 244 111 39 chr18 28390195 28390818 -58286730 - HERVL40 LTR ERVL -371 5159 4492 3244 261 93 31 chr18 28390829 28392036 -58285512 - HERVL40 LTR ERVL -1419 4111 2831 967 294 5 51 chr18 28392019 28392410 -58285138 - HERVL40 LTR ERVL -3108 2422 2050 * 357 261 42 42 chr18 28392498 28392617 -58284931 - HERVL40 LTR ERVL -4039 1491 1373 375 115 71 106 chr18 28393048 28393161 -58284387 - HERVL40 LTR ERVL -4324 1206 1098 183 42 0 0 chr18 28393176 28393200 -58284348 + (CAA)n Simple_repeat Simple_repeat 2 25 0 301 176 54 14 chr18 28393534 28393608 -58283940 - HERVL40 LTR ERVL -5453 77 1 526 253 93 42 chr18 28393611 28393848 -58283700 - LTR40b LTR ERVL -4 458 210 2820 260 51 26 chr18 28393851 28396011 -58281537 + L1MEc LINE L1 1061 3356 -3026 * 6556 175 41 11 chr18 28396000 28397693 -58279855 + L1PA12 LINE L1 72 2068 -5513 3326 110 0 2 chr18 28397693 28398183 -58279365 + L1PA13 LINE L1 5675 6163 0 5266 239 46 14 chr18 28398187 28399915 -58277633 + L1MEc LINE L1 3356 5139 -1243 3568 195 46 24 chr18 28399903 28400760 -58276788 + L1MB7 LINE L1 5272 6151 -33 * 2280 97 0 7 chr18 28400760 28401059 -58276489 - AluSc SINE Alu -12 297 1 3568 195 46 24 chr18 28401059 28401084 -58276464 + L1MB7 LINE L1 6151 6174 -10 384 342 7 0 chr18 28401253 28401405 -58276143 + ERVL LTR ERVL 4193 4345 -1419 696 204 210 0 chr18 28401652 28401833 -58275715 - MER20 DNA MER1_type 0 219 1 367 254 121 29 chr18 28402231 28402404 -58275144 + LTR16A1 LTR ERVL 254 442 -15 392 301 77 38 chr18 28402405 28402614 -58274934 - MIR SINE MIR -3 259 43 2382 112 36 17 chr18 28403659 28404016 -58273532 + THE1B LTR MaLR 1 364 0 238 319 33 55 chr18 28406840 28406931 -58270617 - L2 LINE L2 0 3272 3184 232 281 31 0 chr18 28407118 28407182 -58270366 + (CAGAGA)n Simple_repeat Simple_repeat 1 66 0 2340 101 7 0 chr18 28407632 28407940 -58269608 + AluSg SINE Alu 1 310 0 712 289 123 50 chr18 28408003 28408488 -58269060 - L2 LINE L2 -32 3281 2760 745 274 43 89 chr18 28408490 28408881 -58268667 - L2 LINE L2 -661 2653 2281 218 313 15 0 chr18 28409003 28409114 -58268434 + (CA)n Simple_repeat Simple_repeat 1 112 0 2132 118 0 0 chr18 28410225 28410530 -58267018 + AluSg SINE Alu 1 305 0 2015 125 64 19 chr18 28411487 28411846 -58265702 + THE1C LTR MaLR 1 375 0 658 283 67 27 chr18 28412929 28413152 -58264396 + MIR SINE MIR 31 262 0 373 278 52 0 chr18 28413493 28413590 -58263958 - MIR3 SINE MIR -39 169 68 330 294 76 8 chr18 28413622 28413741 -58263807 + MIR SINE MIR 74 200 -62 895 219 30 60 chr18 28413954 28414219 -58263329 - L2 LINE L2 -9 3304 3048 2339 103 7 0 chr18 28414527 28414837 -58262711 - AluSx SINE Alu 0 312 1 29 0 0 0 chr18 28414852 28414881 -58262667 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr18 28415165 28415190 -58262358 + AT_rich Low_complexity Low_complexity 1 25 0 683 267 43 110 chr18 28415295 28415460 -58262088 + L3 LINE CR1 654 829 -748 2351 98 0 10 chr18 28415460 28415766 -58261782 + AluSx SINE Alu 5 307 -5 246 32 0 0 chr18 28415766 28415783 -58261765 + (CA)n Simple_repeat Simple_repeat 1 48 0 246 32 0 0 chr18 28415783 28415814 -58261734 + (CA)n Simple_repeat Simple_repeat 2 32 0 683 267 43 110 chr18 28415814 28416075 -58261473 + L3 LINE CR1 827 1068 -509 381 268 39 33 chr18 28416105 28416258 -58261290 + L2 LINE L2 3111 3264 -49 373 286 197 6 chr18 28416333 28416511 -58261037 - MIR SINE MIR -9 253 42 265 363 68 16 chr18 28416523 28416713 -58260835 + L3 LINE CR1 1094 1293 -284 402 296 0 28 chr18 28416761 28416869 -58260679 - MER94 DNA DNA -26 108 4 262 353 82 16 chr18 28416892 28417076 -58260472 - MIR SINE MIR -59 203 8 277 274 0 0 chr18 28417081 28417154 -58260394 + L3 LINE CR1 1286 1358 -219 554 259 82 34 chr18 28417375 28417668 -58259880 - MER113 DNA MER1_type? -40 481 175 2027 220 30 24 chr18 28417726 28418222 -58259326 + MLT1D LTR MaLR 1 499 -6 410 91 0 0 chr18 28418240 28418306 -58259242 + L1PB4 LINE L1 6091 6156 0 186 250 0 0 chr18 28418375 28418419 -58259129 + MIR3 SINE MIR 155 198 -10 1549 160 87 0 chr18 28422108 28422383 -58255165 + AluJb SINE Alu 1 299 -13 979 227 27 40 chr18 28423164 28423347 -58254201 + MER58A DNA MER1_type 3 184 -2236 2401 68 0 3 chr18 28423347 28423654 -58253894 + AluY SINE Alu 1 306 -5 979 227 27 40 chr18 28423654 28423695 -58253853 + MER58A DNA MER1_type 184 224 0 352 22 0 0 chr18 28423817 28423863 -58253685 + L1PA4 LINE L1 6110 6155 0 414 0 0 0 chr18 28424058 28424083 -58253465 + (CA)n Simple_repeat Simple_repeat 1 71 0 414 0 0 0 chr18 28424083 28424129 -58253419 + (CA)n Simple_repeat Simple_repeat 2 47 0 394 280 45 15 chr18 28424535 28424667 -58252881 - MER5A DNA MER1_type 0 189 54 343 275 0 22 chr18 28425238 28425329 -58252219 - MIR SINE MIR -56 206 118 302 311 106 0 chr18 28425686 28425818 -58251730 - MER69 DNA AcHobo -2380 146 1 1953 131 3 0 chr18 28425843 28426154 -58251394 + AluSx SINE Alu 1 312 0 221 245 0 0 chr18 28426384 28426445 -58251103 + (TATG)n Simple_repeat Simple_repeat 1 61 0 1512 196 26 59 chr18 28426566 28426953 -58250595 + MLT1A2 LTR MaLR 1 374 0 262 243 40 0 chr18 28427197 28427271 -58250277 + (TTTA)n Simple_repeat Simple_repeat 2 78 0 261 231 102 37 chr18 28428273 28428381 -58249167 - MIR SINE MIR 0 262 148 3716 151 19 23 chr18 28428786 28429483 -58248065 + L1MB2 LINE L1 5477 6170 -1 1591 140 14 11 chr18 28429519 28429805 -58247743 - L1MA3 LINE L1 0 6305 6019 26 0 0 0 chr18 28431077 28431103 -58246445 + AT_rich Low_complexity Low_complexity 1 26 0 1295 202 41 49 chr18 28431267 28431634 -58245914 + MLT1A1 LTR MaLR 1 364 -1 194 232 18 36 chr18 28431764 28431820 -58245728 - MER5B DNA MER1_type -123 55 1 442 280 61 8 chr18 28432283 28432415 -58245133 + MIR SINE MIR 1 139 -123 28 29 0 0 chr18 28432451 28432486 -58245062 + AT_rich Low_complexity Low_complexity 1 35 0 345 292 125 35 chr18 28432778 28432922 -58244626 - L2 LINE L2 0 3272 3116 13757 138 34 22 chr18 28432924 28435313 -58242235 - Tigger1 DNA MER2_type 0 2418 1 2026 89 0 32 chr18 28435350 28435632 -58241916 + AluSg SINE Alu 21 293 -17 207 0 0 0 chr18 28436406 28436429 -58241119 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 353 260 125 0 chr18 28437447 28437543 -58240005 + MER69 DNA AcHobo 218 325 -901 294 238 0 89 chr18 28437584 28437620 -58239928 + MER69 DNA AcHobo 477 515 -711 2791 171 44 26 chr18 28437620 28438164 -58239384 + MLT2B3 LTR ERVL 1 554 0 294 238 0 89 chr18 28438164 28438228 -58239320 + MER69 DNA AcHobo 515 568 -658 975 207 192 15 chr18 28438274 28438665 -58238883 + MER69 DNA AcHobo 2024 2483 -43 811 148 0 30 chr18 28439167 28439302 -58238246 - FLAM_C SINE Alu -2 131 1 30 0 0 0 chr18 28439672 28439702 -58237846 + AT_rich Low_complexity Low_complexity 1 30 0 234 62 0 0 chr18 28441097 28441129 -58236419 + (TA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr18 28441129 28441152 -58236396 + (T)n Simple_repeat Simple_repeat 1 23 0 205 328 0 0 chr18 28441381 28441439 -58236109 - L2 LINE L2 -2 3270 3213 375 327 93 13 chr18 28441706 28441856 -58235692 - MIR SINE MIR -73 189 28 213 44 22 44 chr18 28441879 28441924 -58235624 + (TTATA)n Simple_repeat Simple_repeat 1 44 0 25 51 0 0 chr18 28442075 28442114 -58235434 + AT_rich Low_complexity Low_complexity 1 39 0 2178 215 65 48 chr18 28442367 28443018 -58234530 - L1MC4 LINE L1 -142 7900 7239 1371 249 58 13 chr18 28443038 28443054 -58234494 - L1MC4 LINE L1 -950 7092 7078 2177 104 0 7 chr18 28443054 28443351 -58234197 - AluSx SINE Alu -17 295 1 1371 249 58 13 chr18 28443351 28443712 -58233836 - L1MC4 LINE L1 -964 7078 6698 883 232 45 65 chr18 28443830 28444140 -58233408 + MLT2C1 LTR ERVL 59 362 -35 435 235 129 8 chr18 28444148 28444280 -58233268 - L1MC4 LINE L1 -1436 6606 6459 922 219 33 14 chr18 28444797 28445012 -58232536 + MER20 DNA MER1_type 1 219 0 407 331 51 0 chr18 28445484 28445662 -58231886 + MER5A DNA MER1_type 1 187 -2 252 198 0 50 chr18 28446431 28446532 -58231016 + (TTA)n Simple_repeat Simple_repeat 3 98 0 2256 66 7 3 chr18 28446539 28446840 -58230708 + L1PA10 LINE L1 5867 6168 0 5094 223 35 35 chr18 28447011 28449509 -58228039 - L1MD2 LINE L1 -10 6349 3855 1534 223 62 47 chr18 28450384 28450832 -58226716 - MLT1C LTR MaLR -4 463 9 220 294 167 10 chr18 28451784 28451886 -58225662 - MIR SINE MIR -94 168 51 694 219 0 0 chr18 28452449 28452572 -58224976 + FLAM_A SINE Alu 1 123 -10 2311 123 16 27 chr18 28453921 28454287 -58223261 + THE1B LTR MaLR 1 362 -2 372 242 0 11 chr18 28455045 28455136 -58222412 - MLT1B LTR MaLR 0 390 301 34 84 0 0 chr18 28455477 28455560 -58221988 + AT_rich Low_complexity Low_complexity 1 83 0 2094 131 0 0 chr18 28455574 28455864 -58221684 - AluSx SINE Alu -20 292 3 282 271 215 0 chr18 28455985 28456129 -58221419 - L3 LINE CR1 -1 1576 1402 1925 163 23 9 chr18 28456144 28456487 -58221061 - MER7A DNA MER2_type 0 346 1 2948 225 86 26 chr18 28456718 28456820 -58220728 - L1ME1 LINE L1 -18 6148 6054 2429 84 0 0 chr18 28456820 28457130 -58220418 - AluY SINE Alu -1 310 1 2948 225 86 26 chr18 28457130 28458568 -58218980 - L1ME1 LINE L1 -112 6054 4507 528 253 77 4 chr18 28458735 28458968 -58218580 + L1M4 LINE L1 4229 4478 -1668 1412 193 125 36 chr18 28459123 28459537 -58218011 - MER89 LTR ERV1 0 559 9 221 312 39 13 chr18 28459636 28459713 -58217835 - L2 LINE L2 -268 3004 2926 201 300 0 0 chr18 28460448 28460498 -58217050 + GA-rich Low_complexity Low_complexity 5 54 0 267 329 171 0 chr18 28461798 28461944 -58215604 + L2 LINE L2 3143 3313 0 7649 231 108 24 chr18 28462381 28466098 -58211450 + L1MDa LINE L1 19 4045 -2495 1394 226 60 37 chr18 28466410 28466745 -58210803 - L1M4 LINE L1 -1254 4892 4537 3937 88 23 0 chr18 28466745 28467303 -58210245 + L1PA13 LINE L1 5590 6160 -3 1394 226 60 37 chr18 28467303 28467533 -58210015 - L1M4 LINE L1 -1609 4537 4314 467 283 13 20 chr18 28467572 28467724 -58209824 + MIR SINE MIR 112 262 0 22 0 0 0 chr18 28468968 28468990 -58208558 + AT_rich Low_complexity Low_complexity 1 22 0 252 184 0 0 chr18 28469061 28469110 -58208438 + (CACG)n Simple_repeat Simple_repeat 3 51 0 294 29 0 0 chr18 28469115 28469150 -58208398 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3382 68 9 3 chr18 28469150 28469621 -58207927 - L1PA8 LINE L1 -22 6150 5679 312 261 56 33 chr18 28469660 28469840 -58207708 - L1ME4a LINE L1 -257 5864 5681 410 310 63 68 chr18 28469841 28470205 -58207343 - L1ME4a LINE L1 -490 5631 5255 274 243 29 0 chr18 28470270 28470340 -58207208 + (TATATG)n Simple_repeat Simple_repeat 5 76 0 544 371 52 45 chr18 28471252 28471654 -58205894 - L2 LINE L2 -1 3271 2867 1044 228 18 18 chr18 28471873 28472097 -58205451 + MER58A DNA MER1_type 1 224 0 34 42 0 0 chr18 28472211 28472259 -58205289 + AT_rich Low_complexity Low_complexity 1 48 0 188 333 151 13 chr18 28472623 28472782 -58204766 - MIR SINE MIR -3 259 79 854 179 11 37 chr18 28473534 28473724 -58203824 - AluJo SINE Alu -8 304 120 738 178 0 25 chr18 28473726 28473883 -58203665 - L1 LINE L1 -1689 4457 4305 1641 136 105 8 chr18 28473885 28474251 -58203297 - MSTA LTR MaLR 0 428 1 312 114 0 148 chr18 28474251 28474339 -58203209 - L1 LINE L1 -1839 4307 4233 1289 120 0 0 chr18 28474339 28474565 -58202983 - AluSg/x SINE Alu 0 360 135 4221 162 20 24 chr18 28474566 28475431 -58202117 - L1 LINE L1 -1904 4242 3382 1965 134 7 23 chr18 28476510 28476817 -58200731 + AluSx SINE Alu 1 302 -10 216 67 0 0 chr18 28478998 28479028 -58198520 + (GA)n Simple_repeat Simple_repeat 2 31 0 392 50 0 17 chr18 28479660 28479720 -58197828 + (CA)n Simple_repeat Simple_repeat 2 60 0 186 133 0 0 chr18 28479878 28479908 -58197640 + (TC)n Simple_repeat Simple_repeat 1 30 0 322 339 63 56 chr18 28480169 28480550 -58196998 - L1ME3A LINE L1 -238 5932 5535 1408 191 26 81 chr18 28481019 28481486 -58196062 - MLT1D LTR MaLR -63 442 2 309 326 23 23 chr18 28481839 28481968 -58195580 + MLT2E LTR ERVL 36 164 -464 265 244 24 47 chr18 28482062 28482189 -58195359 + MLT2E LTR ERVL 505 628 0 2230 121 0 0 chr18 28482488 28482785 -58194763 - AluSx SINE Alu -15 297 1 210 44 0 111 chr18 28483178 28483223 -58194325 + (TAAAAA)n Simple_repeat Simple_repeat 3 42 0 377 219 9 9 chr18 28484467 28484572 -58192976 + MER103 DNA DNA 17 121 -45 2240 106 0 3 chr18 28486475 28486776 -58190772 - AluSq SINE Alu -13 300 1 3368 113 20 2 chr18 28487645 28488148 -58189400 + MER41E LTR ERV1 1 512 0 255 261 11 68 chr18 28488184 28488272 -58189276 + MIR SINE MIR 110 192 -70 272 270 36 54 chr18 28488362 28488473 -58189075 - MIR SINE MIR -88 174 66 365 290 111 51 chr18 28488601 28489070 -58188478 + L1ME LINE L1 5308 5817 -304 273 331 86 27 chr18 28489758 28490015 -58187533 + LTR33A LTR ERVL 252 523 0 2234 131 0 6 chr18 28490169 28490482 -58187066 + AluSq SINE Alu 1 311 -2 280 285 161 15 chr18 28490498 28490635 -58186913 - MIR SINE MIR -101 161 5 900 327 88 56 chr18 28490928 28491995 -58185553 - L2 LINE L2 -88 3184 2078 1894 48 0 13 chr18 28492288 28492519 -58185029 + AluY SINE Alu 84 311 0 524 193 9 0 chr18 28493419 28493533 -58184015 + (CAT)n Simple_repeat Simple_repeat 3 117 0 291 232 24 24 chr18 28494104 28494186 -58183362 - MIR SINE MIR -77 185 104 1601 164 0 0 chr18 28494617 28494855 -58182693 + AluSx SINE Alu 1 238 -74 216 0 0 0 chr18 28494875 28494899 -58182649 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 216 342 108 0 chr18 28496265 28496385 -58181163 - L2 LINE L2 0 3313 3181 442 262 115 86 chr18 28496733 28496977 -58180571 - MIR SINE MIR 0 262 12 2361 96 0 3 chr18 28497421 28497722 -58179826 + AluSq SINE Alu 1 300 -13 680 322 47 0 chr18 28497942 28498178 -58179370 + MIR SINE MIR 7 253 -9 206 263 35 0 chr18 28498564 28498621 -58178927 - L2 LINE L2 -220 3052 2994 189 143 302 48 chr18 28498657 28498720 -58178828 + L2 LINE L2 3193 3271 -1 243 0 0 0 chr18 28499159 28499186 -58178362 + (TG)n Simple_repeat Simple_repeat 2 28 0 303 306 10 10 chr18 28500140 28500238 -58177310 + L1MC4 LINE L1 6614 6711 -1331 1259 174 60 87 chr18 28500352 28500720 -58176828 - MLT1A2 LTR MaLR 0 374 17 754 289 64 52 chr18 28500720 28501199 -58176349 + L2 LINE L2 2787 3280 -33 303 196 0 0 chr18 28501218 28501274 -58176274 + L1MC4 LINE L1 6648 6703 -1339 219 69 0 0 chr18 28501319 28501348 -58176200 + (CATA)n Simple_repeat Simple_repeat 2 30 0 1874 135 81 3 chr18 28501348 28501681 -58175867 - MER46B DNA MER2_type -2 234 1 301 263 79 0 chr18 28502782 28502896 -58174652 + L1ME3 LINE L1 6037 6159 -3 206 283 0 38 chr18 28503843 28503896 -58173652 + MIR3 SINE MIR 106 156 -52 233 387 28 0 chr18 28504335 28504441 -58173107 - L2 LINE L2 -20 3293 3185 227 222 0 0 chr18 28505669 28505714 -58171834 - L3 LINE CR1 -4 1573 1529 249 310 16 85 chr18 28505716 28505817 -58171731 - MER5A DNA MER1_type 0 189 97 1956 218 26 28 chr18 28505817 28506285 -58171263 - MLT1C LTR MaLR 0 467 1 249 310 16 85 chr18 28506285 28506312 -58171236 - MER5A DNA MER1_type -92 97 70 255 263 0 0 chr18 28506361 28506418 -58171130 - MIR3 SINE MIR -54 154 98 1042 219 179 8 chr18 28507347 28507463 -58170085 + AluSg SINE Alu 1 96 -204 519 17 0 0 chr18 28507463 28507523 -58170025 + (CA)n Simple_repeat Simple_repeat 1 60 0 1042 219 179 8 chr18 28507523 28507652 -58169896 + AluSg SINE Alu 96 288 -12 558 216 12 12 chr18 28507667 28507829 -58169719 + GA-rich Low_complexity Low_complexity 3 164 0 237 315 103 27 chr18 28508453 28508599 -58168949 + MER5A DNA MER1_type 33 189 0 579 152 0 10 chr18 28509062 28509161 -58168387 + MER4A LTR ERV1 1 98 -566 1573 142 3 79 chr18 28509161 28509535 -58168013 + MER4A LTR ERV1 261 664 0 358 331 97 27 chr18 28510789 28511088 -58166460 - L2 LINE L2 -427 2887 2568 250 220 0 0 chr18 28511127 28511177 -58166371 - L2 LINE L2 -6 3307 3258 184 339 0 15 chr18 28511529 28511594 -58165954 - L2 LINE L2 -514 2800 2737 22 35 0 0 chr18 28515240 28515269 -58162279 + AT_rich Low_complexity Low_complexity 1 29 0 467 300 61 25 chr18 28517445 28517602 -58159946 + MIR SINE MIR 29 191 -62 2418 41 0 76 chr18 28519290 28519634 -58157914 + AluYb8 SINE Alu 1 318 0 1900 176 0 0 chr18 28519975 28520271 -58157277 - AluJb SINE Alu -16 296 1 344 265 94 47 chr18 28521025 28521259 -58156289 + L1MEc LINE L1 897 1141 -5255 1200 249 88 78 chr18 28521260 28522174 -58155374 + L1M4 LINE L1 4104 5026 -1120 791 282 14 5 chr18 28522801 28523014 -58154534 - MIR SINE MIR -13 249 35 954 185 17 0 chr18 28523616 28523789 -58153759 - AluJb SINE Alu 0 312 137 412 301 117 12 chr18 28524256 28524419 -58153129 - MIR SINE MIR -70 192 13 1386 169 42 60 chr18 28524724 28525008 -58152540 - MLT2B2 LTR ERVL -236 279 1 333 263 53 18 chr18 28525502 28525616 -58151932 - L2 LINE L2 0 3313 3196 537 331 44 19 chr18 28526144 28526364 -58151184 - MIR SINE MIR -6 256 34 1041 223 43 29 chr18 28526537 28526916 -58150632 + MLT2B3 LTR ERVL 165 548 -6 2372 88 135 21 chr18 28527695 28528079 -58149469 - MSTA LTR MaLR 0 428 1 459 145 0 0 chr18 28529902 28529985 -58147563 + (GA)n Simple_repeat Simple_repeat 2 84 0 30 0 0 0 chr18 28531511 28531541 -58146007 + AT_rich Low_complexity Low_complexity 1 30 0 5975 219 39 40 chr18 28532132 28534002 -58143546 + L1M4 LINE L1 3435 5302 -844 3336 194 49 22 chr18 28534004 28534776 -58142772 - L1MB7 LINE L1 -120 6064 5272 2291 107 3 3 chr18 28535572 28535882 -58141666 + AluSq SINE Alu 1 310 -3 25 0 0 0 chr18 28535882 28535907 -58141641 + AT_rich Low_complexity Low_complexity 1 25 0 1036 285 117 21 chr18 28536771 28536921 -58140627 - L1MB7 LINE L1 -1014 5132 4998 518 268 89 38 chr18 28536921 28537134 -58140414 + MER58A DNA MER1_type 1 224 0 1036 285 117 21 chr18 28537134 28537566 -58139982 - L1MB7 LINE L1 -1148 4998 4494 891 282 117 29 chr18 28537561 28538562 -58138986 - L1MB7 LINE L1 -2077 4069 2950 * 300 70 0 0 chr18 28538568 28538611 -58138937 + (TG)n Simple_repeat Simple_repeat 2 44 0 249 33 0 0 chr18 28538629 28538659 -58138889 + (CATATA)n Simple_repeat Simple_repeat 5 34 0 810 293 98 10 chr18 28538683 28539348 -58138200 - L1M1 LINE L1 -4278 3468 2662 208 195 0 24 chr18 28540075 28540116 -58137432 + MER5B DNA MER1_type 135 174 -4 293 297 148 31 chr18 28543053 28543282 -58134266 - MIR SINE MIR -2 260 5 1604 177 70 23 chr18 28543492 28543836 -58133712 + MLT1A1 LTR MaLR 4 363 -2 922 298 66 16 chr18 28544495 28544935 -58132613 - LTR16B LTR ERVL -2 462 1 378 0 0 0 chr18 28544960 28545002 -58132546 + (TG)n Simple_repeat Simple_repeat 2 43 0 2312 95 3 7 chr18 28545759 28546064 -58131484 + AluSq SINE Alu 4 307 -6 212 240 0 13 chr18 28546437 28546512 -58131036 + (TG)n Simple_repeat Simple_repeat 2 75 0 2061 148 58 0 chr18 28546517 28546862 -58130686 - MER47A DNA MER2_type 0 366 2 1385 180 65 84 chr18 28546876 28547304 -58130244 - MLT2C2 LTR ERVL -44 420 1 773 273 88 4 chr18 28547516 28547776 -58129772 - L1ME3 LINE L1 -3 6159 5878 2660 251 63 78 chr18 28548058 28548581 -58128967 - L2 LINE L2 -419 2895 2365 1582 119 22 0 chr18 28548581 28548807 -58128741 + AluSq SINE Alu 1 231 -82 2660 251 63 78 chr18 28548807 28549448 -58128100 - L2 LINE L2 -949 2365 1749 208 368 15 0 chr18 28549832 28549900 -58127648 + MIR3 SINE MIR 108 176 -32 353 272 100 114 chr18 28551015 28551457 -58126091 + MLT1J LTR MaLR 3 439 -72 2168 105 34 0 chr18 28551457 28551752 -58125796 + AluSq SINE Alu 2 306 -7 353 272 100 114 chr18 28551752 28551817 -58125731 + MLT1J LTR MaLR 439 503 -8 912 196 232 57 chr18 28551956 28552288 -58125260 - MSTD LTR MaLR -6 390 1 1144 229 50 30 chr18 28553253 28553615 -58123933 - L1MA9 LINE L1 -40 6272 5904 1794 119 14 10 chr18 28553615 28553910 -58123638 + MER6 DNA MER2_type 310 865 0 7168 254 58 12 chr18 28554131 28554343 -58123205 - L1M2 LINE L1 -4163 3005 2804 218 0 94 0 chr18 28554343 28554375 -58123173 + T-rich Low_complexity Low_complexity 2 36 0 7168 254 58 12 chr18 28554375 28557013 -58120535 - L1M2 LINE L1 -4364 2804 1 544 275 49 62 chr18 28557619 28557863 -58119685 - MIR SINE MIR 0 262 22 25 0 0 0 chr18 28558661 28558686 -58118862 + AT_rich Low_complexity Low_complexity 1 25 0 2679 23 0 10 chr18 28559853 28560160 -58117388 - AluY SINE Alu -7 304 1 1954 178 39 0 chr18 28562513 28562851 -58114697 - LTR51 LTR ERV1 0 671 321 1653 95 14 0 chr18 28562852 28563073 -58114475 + AluSq SINE Alu 1 224 -89 433 113 0 0 chr18 28564013 28564084 -58113464 + L1M4 LINE L1 5229 5299 -847 439 307 40 31 chr18 28564633 28564861 -58112687 - LTR40a LTR ERVL -98 421 192 259 346 40 10 chr18 28565202 28565303 -58112245 - L2 LINE L2 -4 3309 3206 2320 166 110 17 chr18 28565585 28566013 -58111535 + MLT2B2 LTR ERVL 1 478 -37 435 38 0 0 chr18 28566013 28566066 -58111482 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 2320 166 110 17 chr18 28566066 28566108 -58111440 + MLT2B2 LTR ERVL 478 515 0 197 377 27 14 chr18 28566879 28567025 -58110523 + MIR3 SINE MIR 16 163 -45 28 29 0 0 chr18 28569007 28569042 -58108506 + AT_rich Low_complexity Low_complexity 1 35 0 271 302 97 14 chr18 28570405 28570591 -58106957 - HAL1b LINE L1 0 1348 1128 4627 146 54 9 chr18 28570591 28570962 -58106586 + L1PA16 LINE L1 4760 5113 -1053 2329 87 0 3 chr18 28570962 28571272 -58106276 + AluY SINE Alu 1 309 -2 4627 146 54 9 chr18 28571272 28572257 -58105291 + L1PA16 LINE L1 5113 6150 -16 271 302 97 14 chr18 28572257 28572358 -58105190 - HAL1b LINE L1 -220 1128 1037 691 272 113 48 chr18 28572483 28572540 -58105008 - HAL1b LINE L1 -632 716 664 1633 154 40 40 chr18 28572540 28572839 -58104709 - AluJo SINE Alu -13 299 1 691 272 113 48 chr18 28572839 28573118 -58104430 - HAL1b LINE L1 -684 664 404 1341 179 28 106 chr18 28573118 28573514 -58104034 - MLT1A1 LTR MaLR 0 365 1 691 272 113 48 chr18 28573514 28573753 -58103795 - HAL1b LINE L1 -944 404 103 1995 146 0 0 chr18 28574516 28574811 -58102737 + AluSc SINE Alu 3 297 -12 236 300 0 0 chr18 28574884 28574934 -58102614 + L2 LINE L2 3201 3250 -22 487 314 62 14 chr18 28574992 28575202 -58102346 - MIR SINE MIR -33 229 10 1737 168 30 81 chr18 28575634 28576068 -58101480 - L1MA10 LINE L1 -9 6325 5914 657 201 54 6 chr18 28576059 28576228 -58101320 + L1MB1 LINE L1 5774 5959 -197 * 29 28 0 0 chr18 28578237 28578273 -58099275 + AT_rich Low_complexity Low_complexity 1 36 0 180 276 138 0 chr18 28579398 28579485 -58098063 + L2 LINE L2 1892 1990 -1324 330 327 183 15 chr18 28579881 28580083 -58097465 - MIR SINE MIR -8 254 19 1876 233 70 11 chr18 28581728 28582183 -58095365 - MLT1D LTR MaLR -2 503 22 1529 230 18 6 chr18 28582267 28582593 -58094955 - MSTD LTR MaLR 0 396 67 1258 167 0 45 chr18 28582595 28582816 -58094732 - AluJo SINE Alu -101 211 1 284 116 0 0 chr18 28582819 28582862 -58094686 - MSTD LTR MaLR -353 43 1 180 0 0 0 chr18 28583111 28583131 -58094417 + (TAAAAA)n Simple_repeat Simple_repeat 5 24 0 732 328 12 0 chr18 28584603 28584850 -58092698 + MIR SINE MIR 13 262 0 2279 134 68 12 chr18 28585308 28585717 -58091831 - MER57B LTR ERV1 -2 432 1 5113 193 33 64 chr18 28585898 28587538 -58090010 - L1MC1 LINE L1 0 6333 4776 1532 182 24 30 chr18 28587538 28587835 -58089713 - AluJo SINE Alu -17 295 1 5113 193 33 64 chr18 28587835 28588345 -58089203 - L1MC1 LINE L1 -1557 4776 4252 769 271 32 29 chr18 28590147 28590393 -58087155 - MER113 DNA MER1_type? -146 375 126 1500 158 107 25 chr18 28590393 28590710 -58086838 - MER61A LTR ERV1 0 343 1 769 271 32 29 chr18 28590710 28590803 -58086745 - MER113 DNA MER1_type? -395 126 35 2268 66 10 30 chr18 28590866 28591171 -58086377 - AluY SINE Alu -12 299 1 184 292 0 0 chr18 28591305 28591353 -58086195 + L2 LINE L2 3223 3270 -2 292 311 76 17 chr18 28591932 28592051 -58085497 - MIR SINE MIR -67 141 16 298 256 8 66 chr18 28592368 28592459 -58085089 - MIR SINE MIR 0 262 178 2339 93 3 10 chr18 28592459 28592771 -58084777 + AluSg SINE Alu 1 310 0 298 256 8 66 chr18 28592771 28592800 -58084748 - MIR SINE MIR -84 178 149 207 100 0 0 chr18 28594328 28594358 -58083190 + (T)n Simple_repeat Simple_repeat 1 30 0 603 333 118 22 chr18 28594781 28595305 -58082243 - L2 LINE L2 -1 3312 2746 23 0 0 0 chr18 28595505 28595528 -58082020 + AT_rich Low_complexity Low_complexity 1 23 0 249 363 11 0 chr18 28595933 28596024 -58081524 + L1MEd LINE L1 1390 1481 -5466 1929 131 11 0 chr18 28596178 28596482 -58081066 - AluSx SINE Alu 0 307 1 233 215 46 0 chr18 28596518 28596583 -58080965 + L1MEd LINE L1 1691 1758 -5202 236 298 110 26 chr18 28596611 28596883 -58080665 + L1MEd LINE L1 1790 2084 -4863 308 311 162 35 chr18 28597040 28597268 -58080280 + LTR33 LTR ERVL 235 491 -30 265 274 80 24 chr18 28597527 28597739 -58079809 + L1MEd LINE L1 2276 2499 -4639 2755 244 100 36 chr18 28597821 28598598 -58078950 + L1MEd LINE L1 4 830 -6029 2422 224 77 24 chr18 28598580 28599553 -58077995 + L1MEd LINE L1 3543 4567 -2390 * 4792 218 19 31 chr18 28599587 28601722 -58075826 + L1MB8 LINE L1 4326 6433 -5 220 120 40 0 chr18 28601722 28601772 -58075776 + (TA)n Simple_repeat Simple_repeat 1 52 0 1535 292 81 17 chr18 28602034 28603129 -58074419 + L1M4b LINE L1 2925 4046 -2911 23 68 0 0 chr18 28603248 28603292 -58074256 + AT_rich Low_complexity Low_complexity 1 44 0 1254 178 58 35 chr18 28603604 28603863 -58073685 - AluJo SINE Alu -13 299 35 2894 178 23 16 chr18 28603863 28604662 -58072886 - L1MB5 LINE L1 -313 5861 5058 414 239 27 17 chr18 28604885 28605023 -58072525 + L1ME LINE L1 5460 5600 -570 1230 237 89 11 chr18 28605095 28605542 -58072006 - L1MB5 LINE L1 -1199 4947 4466 732 224 58 0 chr18 28605555 28605711 -58071837 - MER20 DNA MER1_type -54 165 1 236 314 46 46 chr18 28605929 28606104 -58071444 + L1ME LINE L1 200 374 -5696 288 119 0 102 chr18 28606108 28606167 -58071381 + MLT1B LTR MaLR 4 56 -334 36 40 0 0 chr18 28606792 28606842 -58070706 + AT_rich Low_complexity Low_complexity 1 50 0 363 121 0 0 chr18 28607438 28607496 -58070052 + (CA)n Simple_repeat Simple_repeat 2 59 0 232 105 53 18 chr18 28607506 28607563 -58069985 + (TA)n Simple_repeat Simple_repeat 1 59 0 273 315 14 0 chr18 28607808 28607881 -58069667 - MIR SINE MIR -83 125 52 734 284 19 23 chr18 28607913 28608128 -58069420 + MIR SINE MIR 10 223 -39 1756 184 13 3 chr18 28610174 28610511 -58067037 - AluJb SINE Alu 0 340 1 212 290 101 72 chr18 28611012 28611150 -58066398 - L2 LINE L2 -220 3052 2911 3637 85 12 4 chr18 28611150 28611657 -58065891 + L1PA10 LINE L1 5658 6168 0 261 366 15 0 chr18 28611727 28611858 -58065690 - MIR SINE MIR -113 149 17 311 95 0 0 chr18 28612696 28612738 -58064810 - LTR5 LTR ERVK -815 154 113 2663 10 0 10 chr18 28612738 28613073 -58064475 + SVA Other Other 1089 1386 0 22 0 0 0 chr18 28614228 28614250 -58063298 + AT_rich Low_complexity Low_complexity 1 22 0 2124 94 3 17 chr18 28614257 28614579 -58062969 + AluSx SINE Alu 1 318 0 784 199 66 0 chr18 28615479 28615675 -58061873 + MER33 DNA MER1_type 10 218 -106 1824 111 70 4 chr18 28615691 28615962 -58061586 - AluSg SINE Alu -21 289 1 380 169 0 0 chr18 28616098 28616163 -58061385 + MER33 DNA MER1_type 258 322 -2 437 248 66 8 chr18 28616182 28616303 -58061245 + MER5A DNA MER1_type 10 137 -52 770 297 14 28 chr18 28617999 28618362 -58059186 - L2 LINE L2 -213 3100 2743 1006 243 118 29 chr18 28618446 28618702 -58058846 + L1ME3A LINE L1 5361 5593 -577 758 225 14 50 chr18 28618702 28618920 -58058628 + MER58C DNA MER1_type 4 213 -2 1006 243 118 29 chr18 28618920 28619109 -58058439 + L1ME3A LINE L1 5593 6013 -157 948 275 99 47 chr18 28619506 28620307 -58057241 + L2 LINE L2 2475 3313 0 22 80 0 0 chr18 28620492 28620542 -58057006 + AT_rich Low_complexity Low_complexity 1 50 0 39 68 0 0 chr18 28621592 28621666 -58055882 + AT_rich Low_complexity Low_complexity 1 74 0 25 0 0 0 chr18 28621741 28621766 -58055782 + AT_rich Low_complexity Low_complexity 1 25 0 709 270 11 0 chr18 28621871 28622045 -58055503 + MIR SINE MIR 86 261 -1 428 373 30 53 chr18 28622100 28622574 -58054974 - L3 LINE CR1 -725 852 390 315 313 30 0 chr18 28623218 28623317 -58054231 + MIR3 SINE MIR 83 184 -24 301 318 136 0 chr18 28623861 28624015 -58053533 + MIR SINE MIR 86 260 -2 1831 156 164 11 chr18 28624859 28625230 -58052318 - MSTA LTR MaLR 0 428 1 920 305 52 26 chr18 28625344 28625842 -58051706 - MLT1J LTR MaLR 0 511 1 741 250 25 20 chr18 28626277 28626521 -58051027 - L1MC4a LINE L1 -1940 5868 5624 516 258 78 37 chr18 28627066 28627283 -58050265 - HAL1b LINE L1 -847 501 276 196 318 0 64 chr18 28628902 28629012 -58048536 - L2 LINE L2 -563 2751 2649 780 332 45 11 chr18 28629617 28629991 -58047557 + LTR16C LTR ERVL 97 483 -8 224 337 74 11 chr18 28630121 28630216 -58047332 + L2 LINE L2 3172 3272 0 197 397 32 39 chr18 28630474 28630630 -58046918 - MIR SINE MIR -71 191 37 208 330 46 18 chr18 28631557 28631666 -58045882 + L2 LINE L2 3202 3313 0 322 328 94 8 chr18 28632031 28632159 -58045389 + MIR SINE MIR 12 150 -112 1312 323 120 26 chr18 28632241 28633027 -58044521 - L2 LINE L2 -272 3041 2188 26 50 0 0 chr18 28633446 28633486 -58044062 + AT_rich Low_complexity Low_complexity 1 40 0 1518 319 191 22 chr18 28633603 28634922 -58042626 - L2 LINE L2 -1216 2098 557 206 329 0 37 chr18 28634975 28635057 -58042491 + MIR SINE MIR 153 231 -31 210 290 0 48 chr18 28635180 28635242 -58042306 - MIR3 SINE MIR -6 202 144 395 335 13 20 chr18 28635270 28635422 -58042126 - MER5B DNA MER1_type -27 151 1 311 234 266 0 chr18 28635422 28635525 -58042023 - MIR SINE MIR -54 154 30 184 240 0 60 chr18 28635952 28636002 -58041546 - MER5B DNA MER1_type -3 175 129 20695 158 27 31 chr18 28637752 28640005 -58037543 + L1MA4 LINE L1 24 2286 -5433 1966 145 0 16 chr18 28640005 28640308 -58037240 + AluSx SINE Alu 9 306 -6 20695 158 27 31 chr18 28640308 28645508 -58032040 + L1MA4 LINE L1 2286 7461 -258 2088 139 0 13 chr18 28645659 28645969 -58031579 - AluSx SINE Alu -6 306 1 569 290 68 6 chr18 28646067 28646095 -58031453 - L2 LINE L2 -767 2547 2522 2385 75 7 0 chr18 28646095 28646402 -58031146 + AluY SINE Alu 1 309 -2 569 290 68 6 chr18 28646402 28646549 -58030999 - L2 LINE L2 -792 2522 2361 221 171 0 0 chr18 28646677 28646718 -58030830 + T-rich Low_complexity Low_complexity 1 41 0 25389 60 11 6 chr18 28646725 28652036 -58025512 - L1PA3 LINE L1 0 6337 982 1783 109 0 48 chr18 28652143 28652456 -58025092 + L1MA2 LINE L1 6007 6304 0 250 262 201 31 chr18 28652557 28652709 -58024839 + MER5B DNA MER1_type 9 172 -6 300 155 0 0 chr18 28652740 28652798 -58024750 - L1MA9 LINE L1 -38 6274 6217 42681 35 21 2 chr18 28653039 28659101 -58018447 + L1PA2 LINE L1 1 6155 0 2519 234 33 56 chr18 28659323 28659866 -58017682 - L1ME1 LINE L1 -4 6162 5608 4451 155 41 1 chr18 28659866 28660615 -58016933 + LTR39 LTR ERV1 3 781 -2 2519 234 33 56 chr18 28660615 28660822 -58016726 - L1ME1 LINE L1 -558 5608 5398 2270 87 10 0 chr18 28660822 28661111 -58016437 + AluSg SINE Alu 1 292 -18 2519 234 33 56 chr18 28661111 28661671 -58015877 - L1ME1 LINE L1 -768 5398 4896 1466 153 36 140 chr18 28661681 28661965 -58015583 + LTR23 LTR ERV1 1 248 -219 2012 91 42 0 chr18 28661965 28662230 -58015318 - AluSp SINE Alu -37 276 1 1466 153 36 140 chr18 28662230 28662430 -58015118 + LTR23 LTR ERV1 248 467 0 2722 249 47 35 chr18 28662456 28662791 -58014757 - L1ME1 LINE L1 -1260 4886 4556 2271 103 0 0 chr18 28662791 28663082 -58014466 - AluSc SINE Alu -16 293 3 2722 249 47 35 chr18 28663082 28663770 -58013778 - L1ME1 LINE L1 -1590 4556 3851 307 225 133 42 chr18 28663768 28664008 -58013540 - L1ME4a LINE L1 -85 6036 5775 * 31 44 0 0 chr18 28664008 28664053 -58013495 + AT_rich Low_complexity Low_complexity 1 45 0 507 267 120 60 chr18 28664058 28664275 -58013273 - MIR SINE MIR -32 230 1 306 333 11 62 chr18 28664323 28664500 -58013048 - L1ME4a LINE L1 -404 5717 5550 3738 160 24 21 chr18 28665042 28665549 -58011999 - L1MA9 LINE L1 -5 6307 5796 444 19 0 0 chr18 28665549 28665602 -58011946 + (CA)n Simple_repeat Simple_repeat 1 53 0 3738 160 24 21 chr18 28665602 28665842 -58011706 - L1MA9 LINE L1 -516 5796 5558 443 239 227 25 chr18 28665956 28666119 -58011429 + MIR SINE MIR 48 243 -19 23 0 0 0 chr18 28666346 28666369 -58011179 + AT_rich Low_complexity Low_complexity 1 23 0 4675 188 14 8 chr18 28666647 28667412 -58010136 - L1PB4 LINE L1 0 6156 5397 2182 100 34 0 chr18 28667412 28667703 -58009845 - AluSp SINE Alu -12 301 1 4675 188 14 8 chr18 28667703 28667918 -58009630 - L1PB4 LINE L1 -759 5397 5185 1956 127 72 20 chr18 28667918 28668264 -58009284 - THE1B LTR MaLR 0 364 1 4675 188 14 8 chr18 28668264 28668927 -58008621 - L1PB4 LINE L1 -971 5185 4503 23 68 0 0 chr18 28669274 28669318 -58008230 + AT_rich Low_complexity Low_complexity 1 44 0 187 296 148 19 chr18 28670028 28670136 -58007412 - L2 LINE L2 -11 3302 3181 273 321 36 0 chr18 28670407 28670519 -58007029 - MIR SINE MIR -46 216 101 391 329 88 33 chr18 28670681 28670921 -58006627 + MIR SINE MIR 2 254 -8 201 133 0 0 chr18 28671664 28671694 -58005854 + (TG)n Simple_repeat Simple_repeat 2 31 0 443 297 39 0 chr18 28671988 28672116 -58005432 - MIR3 SINE MIR -22 186 54 260 269 93 60 chr18 28672560 28672742 -58004806 + L2 LINE L2 3126 3313 0 697 338 105 0 chr18 28673490 28673804 -58003744 + MLT1I LTR MaLR 63 409 0 241 263 0 41 chr18 28673908 28673977 -58003571 + A-rich Low_complexity Low_complexity 1 71 -136 2128 130 36 30 chr18 28673977 28674339 -58003209 + THE1B LTR MaLR 1 364 0 241 263 0 41 chr18 28674339 28674365 -58003183 + A-rich Low_complexity Low_complexity 71 97 -110 7761 21 0 0 chr18 28674365 28675955 -58001593 + L1PA3 LINE L1 4565 6155 0 241 263 0 41 chr18 28675955 28676010 -58001538 + A-rich Low_complexity Low_complexity 97 207 0 569 290 68 6 chr18 28676131 28676278 -58001270 + L2 LINE L2 2361 2522 -792 2385 75 7 0 chr18 28676278 28676585 -58000963 - AluY SINE Alu -2 309 1 569 290 68 6 chr18 28676585 28676613 -58000935 + L2 LINE L2 2522 2547 -767 2031 139 0 19 chr18 28676711 28677021 -58000527 + AluSx SINE Alu 1 304 -8 331 221 24 79 chr18 28678226 28678353 -57999195 + HAL1b LINE L1 485 604 -744 210 37 0 0 chr18 28678756 28678783 -57998765 + (CA)n Simple_repeat Simple_repeat 2 28 0 1412 313 45 25 chr18 28678807 28680033 -57997515 + L1M4 LINE L1 4028 5278 -868 1834 190 24 0 chr18 28680129 28680466 -57997082 + MER70A LTR ERVL 128 472 0 1937 275 67 51 chr18 28680473 28681581 -57995967 + L1MC3 LINE L1 6633 8031 -11 954 271 115 48 chr18 28681666 28682390 -57995158 + L2 LINE L2 2529 3286 -27 232 266 0 0 chr18 28683058 28683122 -57994426 + T-rich Low_complexity Low_complexity 1 64 0 332 339 58 8 chr18 28684144 28684265 -57993283 - L2 LINE L2 -8 3264 3138 217 200 36 18 chr18 28684698 28684753 -57992795 + CT-rich Low_complexity Low_complexity 1 56 0 324 0 0 0 chr18 28684756 28684792 -57992756 + (CA)n Simple_repeat Simple_repeat 2 37 0 207 301 233 0 chr18 28686354 28686487 -57991061 - MIR SINE MIR -15 247 84 594 310 54 0 chr18 28687248 28687432 -57990116 - MIR SINE MIR -10 252 59 307 368 61 0 chr18 28688667 28688781 -57988767 - MIR SINE MIR -70 138 18 3089 174 35 19 chr18 28688972 28689603 -57987945 + L1MB1 LINE L1 5527 6167 -1 243 250 0 0 chr18 28689876 28689944 -57987604 + GA-rich Low_complexity Low_complexity 4 71 0 230 172 17 17 chr18 28690613 28690671 -57986877 + MER94 DNA DNA 60 117 -17 476 283 147 88 chr18 28691788 28692265 -57985283 - L2 LINE L2 0 3313 2809 2410 185 27 12 chr18 28692292 28692779 -57984769 + MLT1D LTR MaLR 10 503 -2 334 179 12 48 chr18 28692780 28692864 -57984684 - L2 LINE L2 -570 2744 2664 220 235 20 0 chr18 28692870 28692921 -57984627 + L2 LINE L2 2661 2712 -602 211 364 70 0 chr18 28692938 28693067 -57984481 - L2 LINE L2 -659 2655 2518 824 212 48 0 chr18 28693126 28693315 -57984233 - MER3 DNA MER1_type -10 199 2 316 214 45 62 chr18 28693330 28693442 -57984106 - L2 LINE L2 -1148 2166 2057 199 355 136 0 chr18 28694427 28694537 -57983011 - L2 LINE L2 -3 3310 3186 1995 127 0 0 chr18 28694608 28694883 -57982665 - AluSg SINE Alu -10 300 26 1637 181 3 22 chr18 28694883 28695198 -57982350 - AluJo SINE Alu -3 309 1 1040 170 38 69 chr18 28695783 28696071 -57981477 + L1MC3 LINE L1 6819 7097 -688 278 315 0 0 chr18 28696071 28696160 -57981388 + MLT1F1 LTR MaLR 35 123 -444 602 181 9 0 chr18 28696169 28696274 -57981274 + L1MC3 LINE L1 7195 7300 -485 1816 169 3 10 chr18 28696274 28696582 -57980966 - AluJb SINE Alu -6 306 1 316 241 0 58 chr18 28696618 28696705 -57980843 - AluJ/FRAM SINE Alu 0 302 221 1456 198 0 0 chr18 28696705 28696947 -57980601 - AluJo SINE Alu -65 247 6 2234 161 37 26 chr18 28696953 28697036 -57980512 + L1MC3 LINE L1 7288 7369 -416 303 28 0 0 chr18 28697036 28697072 -57980476 + (CA)n Simple_repeat Simple_repeat 1 36 0 2234 161 37 26 chr18 28697072 28697417 -57980131 + L1MC3 LINE L1 7369 7721 -64 8273 118 15 12 chr18 28697926 28698995 -57978553 + HSMAR2 DNA Mariner 2 1077 -225 1929 140 14 0 chr18 28698995 28699334 -57978214 + AluSx SINE Alu 1 343 0 8273 118 15 12 chr18 28699334 28699561 -57977987 + HSMAR2 DNA Mariner 1077 1302 0 527 276 158 49 chr18 28699695 28700187 -57977361 - MLT1H LTR MaLR -3 546 1 256 296 9 123 chr18 28701374 28701594 -57975954 + L2 LINE L2 2967 3161 -111 236 282 0 97 chr18 28702085 28702188 -57975360 + MIR SINE MIR 88 180 -82 324 0 0 0 chr18 28704622 28704658 -57972890 + (TG)n Simple_repeat Simple_repeat 2 37 0 1594 206 61 44 chr18 28705255 28705711 -57971837 - MER31B LTR ERV1 -2 464 1 542 324 66 59 chr18 28705911 28706368 -57971180 + L2 LINE L2 2421 2880 -434 415 354 20 15 chr18 28706518 28706713 -57970835 + L2 LINE L2 3118 3313 0 1949 74 8 16 chr18 28707767 28708023 -57969525 - AluY SINE Alu -19 292 39 251 363 44 18 chr18 28708200 28708313 -57969235 - L3 LINE CR1 -437 1140 1025 1756 68 0 0 chr18 28709908 28710114 -57967434 + AluY SINE Alu 84 289 -22 1029 82 0 0 chr18 28710141 28710275 -57967273 + AluSp/q SINE Alu 173 306 -7 342 67 0 0 chr18 28710410 28710455 -57967093 + (TG)n Simple_repeat Simple_repeat 2 46 0 186 143 0 0 chr18 28711875 28711910 -57965638 + (TGGGGG)n Simple_repeat Simple_repeat 2 36 0 313 251 62 31 chr18 28712022 28712249 -57965299 + L1M2 LINE L1 7 240 -6609 * 1171 229 34 34 chr18 28712242 28712283 -57965265 + L1M2 LINE L1 1577 1617 -5232 5035 80 36 1 chr18 28712283 28712948 -57964600 - LTR12 LTR ERV1 0 688 1 1171 229 34 34 chr18 28712948 28713342 -57964206 + L1M2 LINE L1 1616 2012 -4837 212 162 0 0 chr18 28714024 28714061 -57963487 + A-rich Low_complexity Low_complexity 2 38 0 913 201 0 0 chr18 28714221 28714375 -57963173 + FRAM SINE Alu 4 157 -19 240 59 0 0 chr18 28714423 28714457 -57963091 + (CA)n Simple_repeat Simple_repeat 1 34 0 202 336 67 10 chr18 28714528 28714632 -57962916 - MIR SINE MIR -101 161 52 522 322 89 78 chr18 28714965 28715424 -57962124 - L2 LINE L2 0 3272 2809 1400 186 27 24 chr18 28715442 28715737 -57961811 - MLT1A1 LTR MaLR -69 296 1 2297 89 0 20 chr18 28715916 28716220 -57961328 - AluSx SINE Alu -14 298 1 258 294 93 53 chr18 28716348 28716898 -57960650 - L1M4 LINE L1 -2392 3754 3183 201 121 0 0 chr18 28716911 28716944 -57960604 + (TG)n Simple_repeat Simple_repeat 2 34 0 443 245 19 0 chr18 28717007 28717113 -57960435 - L2 LINE L2 -973 2341 2234 1801 242 80 133 chr18 28717124 28717645 -57959903 - MLT1G LTR MaLR 0 590 112 2163 131 0 0 chr18 28717645 28717951 -57959597 - AluSq SINE Alu -7 306 1 1801 242 80 133 chr18 28717951 28718058 -57959490 - MLT1G LTR MaLR -478 112 1 478 243 118 83 chr18 28718120 28718289 -57959259 - MER5A DNA MER1_type -1 188 14 1855 140 6 16 chr18 28719087 28719402 -57958146 + AluSx SINE Alu 1 312 0 1985 101 17 14 chr18 28719801 28720088 -57957460 + AluSp SINE Alu 1 288 -25 243 0 0 0 chr18 28720095 28720122 -57957426 + (TTAAA)n Simple_repeat Simple_repeat 4 30 0 203 200 0 0 chr18 28721626 28721661 -57955887 + A-rich Low_complexity Low_complexity 1 35 0 257 376 6 11 chr18 28722176 28722354 -57955194 + L1ME LINE L1 5536 5712 -409 658 260 205 16 chr18 28722453 28722711 -57954837 - L2 LINE L2 -3 3310 3004 218 309 180 27 chr18 28723895 28724119 -57953429 - L2 LINE L2 -301 3012 2761 3440 133 23 33 chr18 28724267 28724874 -57952674 + LTR26 LTR ERV1 3 603 0 207 0 0 0 chr18 28725091 28725114 -57952434 + (A)n Simple_repeat Simple_repeat 1 23 0 302 301 7 48 chr18 28725259 28725405 -57952143 - MER103 DNA DNA -19 147 8 266 258 16 0 chr18 28726712 28726774 -57950774 + MIR SINE MIR 64 126 -82 270 269 67 50 chr18 28726820 28726939 -57950609 + MIR SINE MIR 127 247 -15 30 69 0 0 chr18 28727246 28727304 -57950244 + AT_rich Low_complexity Low_complexity 1 58 0 302 372 20 25 chr18 28727546 28727742 -57949806 - L1M4 LINE L1 -1006 5140 4946 2182 85 0 23 chr18 28728174 28728479 -57949069 - AluY SINE Alu -13 298 1 3243 79 18 9 chr18 28728724 28729178 -57948370 + LTR22A LTR ERVK 1 458 0 461 181 47 163 chr18 28730322 28730642 -57946906 - Charlie2a DNA MER1_type -1847 1015 733 * 482 313 154 24 chr18 28730640 28731055 -57946493 - Charlie2a DNA MER1_type -2388 474 6 201 284 101 40 chr18 28731119 28731267 -57946281 - L2 LINE L2 -1061 2253 2097 263 281 0 0 chr18 28731399 28731456 -57946092 + MLT1K LTR MaLR 132 188 -400 1871 184 80 18 chr18 28731942 28732343 -57945205 + MSTB LTR MaLR 1 426 0 23 36 0 54 chr18 28732476 28732532 -57945016 + AT_rich Low_complexity Low_complexity 1 53 0 485 331 101 31 chr18 28733700 28734017 -57943531 - L1ME3A LINE L1 -286 5884 5546 234 294 38 12 chr18 28734084 28734244 -57943304 - L1P5 LINE L1 -703 5448 5285 372 310 93 22 chr18 28734249 28734475 -57943073 - L1ME3A LINE L1 -869 5277 5036 2002 146 0 10 chr18 28735038 28735347 -57942201 + AluSx SINE Alu 1 306 -6 677 261 68 17 chr18 28735469 28735645 -57941903 - MIR3 SINE MIR -13 195 11 254 327 106 56 chr18 28737105 28737729 -57939819 + L2 LINE L2 2689 3267 -5 703 286 89 0 chr18 28740807 28741031 -57936517 + MIR SINE MIR 15 258 -4 297 75 0 0 chr18 28741608 28741648 -57935900 + (CA)n Simple_repeat Simple_repeat 1 40 0 254 313 96 54 chr18 28741723 28741889 -57935659 - MIR3 SINE MIR -33 175 3 243 0 0 0 chr18 28742675 28742702 -57934846 + (CA)n Simple_repeat Simple_repeat 2 28 0 681 315 118 14 chr18 28743787 28744143 -57933405 - MLT1J2 LTR MaLR -37 413 21 784 277 44 0 chr18 28744207 28744413 -57933135 + MER58C DNA MER1_type 1 215 0 1122 253 64 0 chr18 28744486 28744782 -57932766 - MLT1E LTR MaLR 0 593 279 1182 172 10 0 chr18 28744787 28744991 -57932557 + MLT2B1 LTR ERVL 1 206 -314 389 188 0 10 chr18 28745007 28745103 -57932445 + (TG)n Simple_repeat Simple_repeat 2 96 0 644 167 117 0 chr18 28745184 28745304 -57932244 - MLT1E LTR MaLR -459 134 1 915 280 100 18 chr18 28745304 28745704 -57931844 - LTR33 LTR ERVL -72 449 17 374 356 112 48 chr18 28747827 28748158 -57929390 + L2 LINE L2 2921 3272 0 597 261 43 21 chr18 28748836 28749024 -57928524 + MIR SINE MIR 1 192 -70 1830 169 65 37 chr18 28749479 28749834 -57927714 - MLT1A1 LTR MaLR 0 365 1 1583 188 0 52 chr18 28750060 28750442 -57927106 + AluJb SINE Alu 1 365 0 203 278 113 52 chr18 28750491 28750606 -57926942 + MIR SINE MIR 78 199 -63 288 246 60 66 chr18 28751007 28751174 -57926374 - L1 LINE L1 -2335 3811 3646 2137 124 7 0 chr18 28751739 28752046 -57925502 + AluSx SINE Alu 1 309 -3 2915 295 161 12 chr18 28752249 28753953 -57923595 - L2 LINE L2 -1 3312 1339 182 200 0 0 chr18 28754201 28754231 -57923317 - L2 LINE L2 -107 3165 3136 203 338 47 74 chr18 28754735 28755034 -57922514 - L2 LINE L2 -626 2688 2398 6110 63 3 54 chr18 28755808 28756681 -57920867 + L1PA8 LINE L1 5333 6161 -11 370 257 62 106 chr18 28756989 28757104 -57920444 - MIR SINE MIR -40 222 120 2314 103 0 0 chr18 28757104 28757405 -57920143 + AluSq SINE Alu 1 301 -12 370 257 62 106 chr18 28757405 28757515 -57920033 - MIR SINE MIR -142 120 7 24 85 0 0 chr18 28757664 28757723 -57919825 + AT_rich Low_complexity Low_complexity 1 59 0 1064 88 27 0 chr18 28758320 28758467 -57919081 - L1PA8 LINE L1 -3 6169 6019 1998 172 27 5 chr18 28758673 28759036 -57918512 - MER57A LTR ERV1 0 403 33 1553 197 65 9 chr18 28759036 28759361 -57918187 + MER61A LTR ERV1 1 343 0 283 57 0 0 chr18 28759361 28759396 -57918152 - MER57A LTR ERV1 -368 35 1 * 3466 127 2 25 chr18 28759396 28759944 -57917604 - MER34B LTR ERV1 -30 535 1 200 133 0 44 chr18 28760925 28760970 -57916578 + (CAAAG)n Simple_repeat Simple_repeat 2 44 0 192 97 0 0 chr18 28761273 28761304 -57916244 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 247 293 0 0 chr18 28762434 28762492 -57915056 + L2 LINE L2 3256 3313 0 616 264 137 24 chr18 28762701 28762913 -57914635 + MIR SINE MIR 2 237 -25 271 273 15 0 chr18 28763244 28763310 -57914238 - MIR SINE MIR 0 262 196 1156 205 10 24 chr18 28766396 28766689 -57910859 + L1MB7 LINE L1 4168 4456 -1690 1580 209 8 32 chr18 28766696 28767065 -57910483 + L1MB7 LINE L1 4750 5109 -1037 3729 182 59 32 chr18 28767090 28767163 -57910385 + L1MB7 LINE L1 5258 5328 -856 1671 157 26 43 chr18 28767163 28767468 -57910080 + AluJb SINE Alu 1 300 -12 3729 182 59 32 chr18 28767468 28768240 -57909308 + L1MB7 LINE L1 5328 6126 -58 1777 149 0 4 chr18 28768245 28768514 -57909034 + AluJo SINE Alu 6 273 -39 247 149 43 0 chr18 28768547 28768594 -57908954 + L1MB8 LINE L1 6115 6163 -15 196 389 56 9 chr18 28769051 28769159 -57908389 + MER5A DNA MER1_type 77 189 0 2257 144 59 24 chr18 28769244 28769653 -57907895 + MSTC LTR MaLR 1 423 -5 1020 260 117 25 chr18 28769688 28770123 -57907425 - L1MC4 LINE L1 -89 7953 7479 491 216 56 0 chr18 28770152 28770277 -57907271 - L1MC4 LINE L1 -641 7401 7270 331 315 63 9 chr18 28771663 28771774 -57905774 - L2 LINE L2 -13 3259 3143 556 329 200 10 chr18 28773210 28773904 -57903644 + L2 LINE L2 1567 2392 -922 194 320 80 13 chr18 28773989 28774064 -57903484 + L2 LINE L2 3148 3227 -45 428 333 81 36 chr18 28774781 28775138 -57902410 - L2 LINE L2 -344 2970 2598 206 128 26 0 chr18 28775279 28775318 -57902230 + (TG)n Simple_repeat Simple_repeat 2 41 0 233 222 72 7 chr18 28775318 28775471 -57902077 + (TA)n Simple_repeat Simple_repeat 2 164 0 613 323 140 43 chr18 28775491 28776729 -57900819 - L2 LINE L2 -50 3222 1402 236 246 49 0 chr18 28777383 28777444 -57900104 - MLT1J LTR MaLR -443 68 5 3888 115 7 2 chr18 28778118 28778693 -57898855 + L1PA13 LINE L1 5585 6162 -1 199 240 0 20 chr18 28781431 28781481 -57896067 + L2 LINE L2 3261 3309 -4 29 70 0 0 chr18 28781993 28782050 -57895498 + AT_rich Low_complexity Low_complexity 1 57 0 211 178 68 0 chr18 28782947 28783020 -57894528 + (TA)n Simple_repeat Simple_repeat 1 78 0 22 0 0 0 chr18 28783346 28783368 -57894180 + AT_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr18 28783454 28783491 -57894057 + AT_rich Low_complexity Low_complexity 1 37 0 2729 105 21 2 chr18 28783740 28784158 -57893390 + L1PA11 LINE L1 5748 6173 -1 340 294 10 0 chr18 28785459 28785561 -57891987 - L1ME3A LINE L1 -39 6131 6029 785 234 11 43 chr18 28785584 28785772 -57891776 + MER5A DNA MER1_type 5 186 -3 1071 157 0 11 chr18 28785870 28786048 -57891500 + AluSg/x SINE Alu 137 312 0 285 295 49 0 chr18 28786053 28786175 -57891373 + L1ME4a LINE L1 5972 6099 -22 888 297 118 20 chr18 28786733 28787174 -57890374 + LTR16C LTR ERVL 3 486 -5 537 304 58 23 chr18 28789047 28789356 -57888192 - L1ME3A LINE L1 -272 5898 5579 24 0 0 0 chr18 28789472 28789496 -57888052 + AT_rich Low_complexity Low_complexity 1 24 0 276 297 81 40 chr18 28789767 28790493 -57887055 + L1MEc LINE L1 2186 2915 -3300 24 32 0 0 chr18 28790661 28790692 -57886856 + AT_rich Low_complexity Low_complexity 1 31 0 232 317 90 24 chr18 28790915 28791205 -57886343 + L1P5 LINE L1 5352 5660 -494 413 279 36 12 chr18 28791227 28791392 -57886156 + L1MC4a LINE L1 5750 5918 -1890 1047 186 10 21 chr18 28792827 28793020 -57884528 + MLT2B2 LTR ERVL 1 191 -324 1317 213 24 45 chr18 28793119 28793409 -57884139 + MLT2B1 LTR ERVL 195 479 -41 198 0 0 0 chr18 28793409 28793431 -57884117 + (TA)n Simple_repeat Simple_repeat 1 22 0 1317 213 24 45 chr18 28793431 28793473 -57884075 + MLT2B1 LTR ERVL 479 520 0 26 50 0 0 chr18 28793491 28793531 -57884017 + AT_rich Low_complexity Low_complexity 1 40 0 229 291 95 32 chr18 28794011 28794169 -57883379 - HAL1b LINE L1 -793 555 388 180 0 0 0 chr18 28795512 28795532 -57882016 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 182 83 56 0 chr18 28796500 28796536 -57881012 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 35 0 0 0 chr18 28796898 28796933 -57880615 + AT_rich Low_complexity Low_complexity 1 35 0 291 254 99 28 chr18 28798570 28798712 -57878836 + MER117 DNA MER1_type 6 157 -40 181 147 29 0 chr18 28799218 28799252 -57878296 + L2 LINE L2 3277 3311 -2 328 299 11 0 chr18 28799379 28799466 -57878082 + MIR SINE MIR 63 150 -112 236 356 23 30 chr18 28803094 28803226 -57874322 - L3 LINE CR1 -98 1479 1349 191 300 44 33 chr18 28803246 28803336 -57874212 - MER5B DNA MER1_type -1 177 87 1177 242 54 67 chr18 28803336 28803782 -57873766 - MER39 LTR ERV1 0 707 268 238 264 264 0 chr18 28803767 28803858 -57873690 - MER34 LTR ERV1 -423 119 5 * 248 320 13 13 chr18 28803864 28803942 -57873606 - MER5B DNA MER1_type -89 89 12 387 311 16 55 chr18 28803944 28804127 -57873421 + MER5B DNA MER1_type 2 177 -1 290 190 35 0 chr18 28804518 28804576 -57872972 - MER39 LTR ERV1 -112 595 536 258 164 0 0 chr18 28805293 28805348 -57872200 + GA-rich Low_complexity Low_complexity 2 56 0 370 299 128 16 chr18 28805954 28806141 -57871407 - MIR SINE MIR -9 253 46 2282 111 36 30 chr18 28806618 28806980 -57870568 - THE1B LTR MaLR 0 364 1 364 161 62 12 chr18 28806980 28807061 -57870487 + MER53 DNA DNA 4 88 -101 * 420 114 23 199 chr18 28807059 28807235 -57870313 + MER53 DNA DNA 42 186 -3 255 253 0 58 chr18 28807518 28807605 -57869943 - L2 LINE L2 0 3313 3232 23 54 0 0 chr18 28807913 28807950 -57869598 + AT_rich Low_complexity Low_complexity 1 37 0 2206 104 13 10 chr18 28808012 28808321 -57869227 - AluSx SINE Alu -1 311 2 1952 134 0 11 chr18 28810594 28810878 -57866670 + AluSx SINE Alu 1 281 -31 204 40 0 0 chr18 28811906 28811931 -57865617 + (GA)n Simple_repeat Simple_repeat 2 26 0 210 171 13 53 chr18 28813559 28813635 -57863913 + (TATATG)n Simple_repeat Simple_repeat 3 75 0 229 146 18 18 chr18 28813644 28813699 -57863849 - LTR66 LTR ERVL -173 437 383 243 0 0 0 chr18 28813705 28813732 -57863816 + (TG)n Simple_repeat Simple_repeat 2 28 0 2316 105 0 0 chr18 28814385 28814690 -57862858 - AluSq SINE Alu -8 305 1 391 266 28 79 chr18 28815123 28815337 -57862211 - MLT1J1 LTR MaLR -1 445 243 5729 95 256 92 chr18 28816155 28817613 -57859935 - pTR5 LTR ERV1 0 2438 741 1776 265 28 8 chr18 28818915 28819387 -57858161 - MER41E LTR ERV1 -11 501 21 262 164 15 30 chr18 28819496 28819563 -57857985 - MER41E LTR ERV1 -221 291 226 407 315 47 27 chr18 28820353 28820502 -57857046 - MIR3 SINE MIR -21 187 36 228 387 68 8 chr18 28822543 28822778 -57854770 - MIR SINE MIR -11 251 3 199 333 0 0 chr18 28822850 28822910 -57854638 + MIR SINE MIR 58 117 -145 215 233 96 14 chr18 28823001 28823074 -57854474 + MIR SINE MIR 172 250 -12 2481 191 66 39 chr18 28823565 28824187 -57853361 - L1MB8 LINE L1 -1 6177 5539 243 250 0 0 chr18 28824991 28825043 -57852505 - L2 LINE L2 -8 3305 3254 1042 270 42 26 chr18 28825073 28825454 -57852094 - MARNA DNA Mariner -199 387 1 2039 143 6 32 chr18 28825781 28826124 -57851424 - MER1B DNA MER1_type -1 336 3 1777 223 19 14 chr18 28826261 28826674 -57850874 - MLT1C LTR MaLR 0 467 53 2002 244 32 35 chr18 28826757 28827348 -57850200 - L1ME3A LINE L1 -89 6081 5493 383 153 90 84 chr18 28831025 28831160 -57846388 - L1ME LINE L1 -520 5601 5470 2159 291 96 35 chr18 28831202 28831953 -57845595 - L1ME LINE L1 -1155 4991 4287 404 0 39 0 chr18 28831953 28832004 -57845544 + (TTTA)n Simple_repeat Simple_repeat 2 54 0 2159 291 96 35 chr18 28832004 28832780 -57844768 - L1ME LINE L1 -1859 4287 3371 2192 121 3 0 chr18 28833692 28833999 -57843549 - AluSp SINE Alu -5 308 1 22 0 0 0 chr18 28834530 28834552 -57842996 + AT_rich Low_complexity Low_complexity 1 22 0 2101 135 0 7 chr18 28834626 28834922 -57842626 - AluSx SINE Alu -13 299 6 205 312 129 29 chr18 28835121 28835291 -57842257 - MIR SINE MIR -45 217 31 273 303 61 10 chr18 28835721 28835820 -57841728 + L2 LINE L2 3169 3272 0 574 213 35 21 chr18 28835825 28835966 -57841582 + Charlie1 DNA MER1_type 1 143 -2618 5288 124 37 2 chr18 28835970 28836790 -57840758 - L1PA15 LINE L1 -5 6160 5313 213 94 0 0 chr18 28836791 28836823 -57840725 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1517 108 18 5 chr18 28836839 28837061 -57840487 - MER30 DNA MER1_type 0 230 6 5760 187 7 3 chr18 28837083 28838130 -57839418 - L1PA15 LINE L1 -876 5270 4216 4296 108 12 19 chr18 28838130 28838778 -57838770 + LTR9B LTR ERV1 1 644 0 5760 187 7 3 chr18 28838778 28838861 -57838687 - L1PA15 LINE L1 -1930 4216 4135 349 195 92 46 chr18 28838868 28838955 -57838593 + Charlie1 DNA MER1_type 137 227 -2534 * 453 199 14 71 chr18 28838950 28839091 -57838457 + Charlie1 DNA MER1_type 2621 2753 -8 194 0 39 0 chr18 28839353 28839379 -57838169 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 24 32 0 0 chr18 28839959 28839990 -57837558 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr18 28840606 28840629 -57836919 + AT_rich Low_complexity Low_complexity 1 23 0 442 281 6 24 chr18 28840631 28840798 -57836750 - MER103 DNA DNA -1 165 2 3692 228 27 13 chr18 28843321 28844107 -57833441 - MER21B LTR ERV1 -24 839 43 217 132 0 0 chr18 28844253 28844291 -57833257 + (TA)n Simple_repeat Simple_repeat 2 39 0 288 277 92 23 chr18 28846518 28846648 -57830900 + L2 LINE L2 3175 3313 0 207 0 0 0 chr18 28847657 28847680 -57829868 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 197 314 0 29 chr18 28848115 28848185 -57829363 - L2 LINE L2 0 3272 3205 657 259 39 10 chr18 28848298 28848503 -57829045 - MIR SINE MIR -29 233 23 302 345 42 24 chr18 28848529 28848694 -57828854 + L1ME3A LINE L1 5231 5398 -748 284 378 59 3 chr18 28848697 28849004 -57828544 + L1ME3A LINE L1 5582 5905 -265 513 316 78 33 chr18 28849202 28849446 -57828102 - MIR SINE MIR 0 262 8 5355 141 8 13 chr18 28849465 28850358 -57827190 - L1PA16 LINE L1 -6 6160 5273 8519 228 42 23 chr18 28850360 28851476 -57826072 - L1PA16 LINE L1 -2082 4064 2971 1781 177 0 7 chr18 28851476 28851776 -57825772 + AluSg SINE Alu 1 298 -12 8519 228 42 23 chr18 28851776 28853001 -57824547 - L1PA16 LINE L1 -3175 2971 1678 274 345 76 7 chr18 28853286 28853431 -57824117 - MIR SINE MIR -11 251 97 21 0 0 0 chr18 28853810 28853831 -57823717 + AT_rich Low_complexity Low_complexity 1 21 0 691 266 80 21 chr18 28854153 28854390 -57823158 + MIR SINE MIR 2 252 -10 356 354 31 12 chr18 28854422 28854583 -57822965 - MIR3 SINE MIR -25 183 20 213 224 10 0 chr18 28856617 28856678 -57820870 + A-rich Low_complexity Low_complexity 1 61 0 2871 178 16 11 chr18 28857535 28858091 -57819457 + MER89 LTR ERV1 1 559 0 1788 135 13 53 chr18 28859326 28859498 -57818050 - AluJb SINE Alu -7 305 150 2160 136 0 0 chr18 28859498 28859799 -57817749 - AluSg SINE Alu -9 301 1 1788 135 13 53 chr18 28859799 28859944 -57817604 - AluJb SINE Alu -162 150 1 951 279 111 32 chr18 28859944 28860660 -57816888 - L2 LINE L2 -11 3302 2549 803 196 65 0 chr18 28861410 28861578 -57815970 + AluJo SINE Alu 121 299 -13 642 218 8 0 chr18 28862031 28862155 -57815393 + AluJb SINE Alu 137 261 -51 1044 198 16 5 chr18 28862181 28862368 -57815180 - MER5A DNA MER1_type 0 189 1 1067 202 55 105 chr18 28863787 28863942 -57813606 - MER39 LTR ERV1 -4 703 542 4320 24 0 0 chr18 28863942 28864447 -57813101 + L1PA4 LINE L1 5648 6152 -3 1067 202 55 105 chr18 28864447 28864673 -57812875 - MER39 LTR ERV1 -165 542 341 563 184 120 8 chr18 28864676 28864801 -57812747 - MER39 LTR ERV1 -568 139 1 212 227 0 0 chr18 28864897 28864941 -57812607 + MIR SINE MIR 219 262 0 31 76 0 0 chr18 28865033 28865099 -57812449 + AT_rich Low_complexity Low_complexity 1 66 0 2126 119 7 0 chr18 28865729 28866031 -57811517 - AluSg SINE Alu -6 304 1 21 0 0 0 chr18 28866038 28866059 -57811489 + AT_rich Low_complexity Low_complexity 1 21 0 248 293 228 8 chr18 28866230 28866353 -57811195 - L3 LINE CR1 -28 1549 1400 2148 109 0 0 chr18 28868034 28868352 -57809196 - AluSq SINE Alu 0 318 1 1268 205 58 53 chr18 28869301 28869643 -57807905 + MER2 DNA MER2_type 1 344 0 245 189 113 0 chr18 28869802 28869855 -57807693 + MIR SINE MIR 91 149 -59 207 167 0 0 chr18 28869965 28870007 -57807541 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 322 234 21 64 chr18 28870174 28870268 -57807280 + L1MC4 LINE L1 6615 6704 -1338 1720 142 16 10 chr18 28870804 28871115 -57806433 - L1MA5A LINE L1 -2 6295 5983 349 281 82 82 chr18 28871117 28871353 -57806195 + L1M2c LINE L1 998 1266 -5523 333 277 20 10 chr18 28871368 28871469 -57806079 - L1MEd LINE L1 -4973 1146 1045 698 210 8 0 chr18 28871659 28871783 -57805765 - FLAM_A SINE Alu -8 125 1 300 295 38 0 chr18 28872127 28872232 -57805316 + HAL1 LINE L1 1495 1603 -904 3471 90 20 0 chr18 28872822 28873312 -57804236 - L1PA13 LINE L1 -5 6158 5659 453 269 208 40 chr18 28874014 28874389 -57803159 + L1M2c LINE L1 2826 3263 -3525 24 32 0 0 chr18 28874389 28874420 -57803128 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr18 28874535 28874563 -57802985 + AT_rich Low_complexity Low_complexity 1 28 0 273 233 0 22 chr18 28874624 28874714 -57802834 + L1MC4a LINE L1 5255 5342 -2466 587 252 0 9 chr18 28874911 28875026 -57802522 + MER81 DNA DNA 1 114 0 749 173 0 0 chr18 28875159 28875286 -57802262 - LTR54 LTR ERV1 -61 449 323 2355 176 23 59 chr18 28875351 28875880 -57801668 + LTR54 LTR ERV1 1 510 0 22 35 0 0 chr18 28876838 28876867 -57800681 + AT_rich Low_complexity Low_complexity 1 29 0 314 305 39 13 chr18 28877189 28877343 -57800205 + HAL1b LINE L1 256 413 -935 235 326 31 0 chr18 28877475 28877573 -57799975 + LTR50 LTR ERVL 490 590 -205 2226 93 3 23 chr18 28877660 28877970 -57799578 - AluSc SINE Alu -5 304 1 824 306 82 18 chr18 28877983 28878326 -57799222 + L1MC4a LINE L1 6559 6923 -885 1278 246 62 31 chr18 28878438 28878792 -57798756 + MLT1A1 LTR MaLR 1 365 0 277 0 0 0 chr18 28879015 28879070 -57798478 + L1PA2 LINE L1 6112 6166 0 832 136 92 49 chr18 28879076 28879260 -57798288 + THE1B LTR MaLR 171 362 -2 1939 167 0 0 chr18 28879382 28879694 -57797854 - AluJb SINE Alu 0 312 1 186 43 0 0 chr18 28879694 28879717 -57797831 + (TTTC)n Simple_repeat Simple_repeat 3 25 0 22 35 0 0 chr18 28880544 28880573 -57796975 + AT_rich Low_complexity Low_complexity 1 29 0 320 231 128 96 chr18 28880573 28880824 -57796724 - L1MC5 LINE L1 -398 7563 7305 316 141 0 71 chr18 28880989 28881074 -57796474 - L1MC5 LINE L1 -744 7217 7139 301 161 48 0 chr18 28881189 28881251 -57796297 - MLT1A1 LTR MaLR 0 365 301 1024 204 33 5 chr18 28882629 28882840 -57794708 + AluJo SINE Alu 85 301 -11 188 380 67 40 chr18 28883523 28883944 -57793604 - L2 LINE L2 -1019 2295 1864 185 241 48 24 chr18 28884083 28884166 -57793382 - L2 LINE L2 -1633 1681 1597 282 368 8 45 chr18 28884197 28884330 -57793218 - MER91A DNA MER1_type -8 188 61 469 251 62 105 chr18 28885153 28885567 -57791981 + L2 LINE L2 2 3312 -1 196 298 0 18 chr18 28885970 28886027 -57791521 + L2 LINE L2 3256 3311 -2 1769 146 187 11 chr18 28887221 28887585 -57789963 + MSTA LTR MaLR 1 428 0 1668 226 94 51 chr18 28888175 28888684 -57788864 + LTR26B LTR ERV1 1 531 0 21 0 0 0 chr18 28889008 28889029 -57788519 + AT_rich Low_complexity Low_complexity 1 21 0 2208 103 3 10 chr18 28889272 28889583 -57787965 + AluY SINE Alu 1 309 -2 258 170 21 0 chr18 28889656 28889703 -57787845 + L2 LINE L2 3266 3313 0 196 212 197 15 chr18 28889755 28889821 -57787727 + L2 LINE L2 3188 3265 -7 207 0 0 0 chr18 28890134 28890157 -57787391 + (TTCA)n Simple_repeat Simple_repeat 4 26 0 974 264 131 5 chr18 28890165 28890652 -57786896 - L2 LINE L2 -26 3287 2725 22 35 0 0 chr18 28891529 28891558 -57785990 + AT_rich Low_complexity Low_complexity 1 29 0 212 288 0 17 chr18 28892474 28892533 -57785015 + (CA)n Simple_repeat Simple_repeat 2 59 0 4867 139 41 8 chr18 28892554 28893789 -57783759 - L1PA16 LINE L1 -3 6163 4879 9721 28 0 1 chr18 28894521 28896451 -57781097 + L1PA4 LINE L1 4222 6152 -3 222 196 0 0 chr18 28896451 28896495 -57781053 + A-rich Low_complexity Low_complexity 5 51 0 25 31 0 0 chr18 28896562 28896594 -57780954 + AT_rich Low_complexity Low_complexity 1 32 0 1553 211 14 0 chr18 28896621 28896900 -57780648 + AluJo SINE Alu 7 289 -23 550 233 86 6 chr18 28897363 28897526 -57780022 + MER5B DNA MER1_type 2 177 -1 1374 207 3 111 chr18 28897579 28897966 -57779582 + MLT1A1 LTR MaLR 21 365 0 2186 133 33 25 chr18 28898352 28898713 -57778835 + THE1B LTR MaLR 1 364 0 23 54 0 0 chr18 28898784 28898821 -57778727 + AT_rich Low_complexity Low_complexity 1 37 0 1642 228 35 28 chr18 28899000 28899429 -57778119 + MLT1C LTR MaLR 34 465 -2 621 288 85 6 chr18 28899512 28899722 -57777826 + MIR SINE MIR 19 241 -21 2031 131 0 0 chr18 28900525 28900847 -57776701 - AluSq SINE Alu 0 322 1 349 197 45 0 chr18 28903955 28904021 -57773527 + MIR SINE MIR 117 185 -77 186 43 0 0 chr18 28904112 28904135 -57773413 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1967 131 0 14 chr18 28904137 28904420 -57773128 - AluSq SINE Alu -30 283 5 463 322 51 19 chr18 28904480 28904694 -57772854 + MIR SINE MIR 42 262 0 1220 151 0 0 chr18 28904829 28905015 -57772533 - MSTB LTR MaLR -239 187 2 946 190 31 132 chr18 28905291 28905738 -57771810 - LTR37A LTR ERV1 -1 425 24 1135 239 51 103 chr18 28905956 28906450 -57771098 - MER31-int LTR ERV1 -827 4109 3642 308 266 44 74 chr18 28906512 28906741 -57770807 - MER31-int LTR ERV1 -1409 4922 4701 240 326 11 11 chr18 28907274 28907366 -57770182 + MER5B DNA MER1_type 87 178 0 309 232 43 82 chr18 28907787 28907994 -57769554 - MER31-int LTR ERV1 -2147 2789 2591 1209 168 13 148 chr18 28908068 28908520 -57769028 - LTR37A LTR ERV1 -18 408 18 447 348 112 16 chr18 28908669 28908974 -57768574 - L2 LINE L2 -64 3208 2875 319 312 58 40 chr18 28909605 28909778 -57767770 - MIR SINE MIR -34 228 53 1040 166 16 21 chr18 28909939 28910132 -57767416 - MER115 DNA AcHobo 0 693 502 457 311 0 0 chr18 28910425 28910547 -57767001 + MER5C DNA MER1_type 3 124 -200 281 268 134 28 chr18 28910665 28910807 -57766741 - MER115 DNA AcHobo -529 164 8 33 25 0 0 chr18 28911667 28911707 -57765841 + AT_rich Low_complexity Low_complexity 1 40 0 425 367 13 6 chr18 28912211 28912369 -57765179 - MER5A DNA MER1_type -1 188 30 1037 201 160 36 chr18 28912631 28913019 -57764529 + LTR37B LTR ERV1 32 467 -1 26 0 0 0 chr18 28913884 28913910 -57763638 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr18 28914260 28914283 -57763265 + AT_rich Low_complexity Low_complexity 1 23 0 488 262 204 16 chr18 28915086 28915399 -57762149 - LTR16A LTR ERVL -78 372 1 782 257 56 0 chr18 28915824 28916003 -57761545 + MER5A DNA MER1_type 1 189 0 545 274 47 57 chr18 28916465 28916852 -57760696 + MER31-int LTR ERV1 3419 3801 -1135 189 0 0 0 chr18 28917405 28917426 -57760122 + (A)n Simple_repeat Simple_repeat 1 21 0 2334 147 10 10 chr18 28917467 28917869 -57759679 + L1MA4 LINE L1 5619 6020 -280 356 177 38 0 chr18 28917884 28917963 -57759585 + L1MB4 LINE L1 6099 6180 0 815 193 113 69 chr18 28918017 28918055 -57759493 + LTR37B LTR ERV1 10 45 -423 1819 129 103 26 chr18 28918055 28918403 -57759145 + THE1C LTR MaLR 1 375 0 815 193 113 69 chr18 28918403 28918727 -57758821 + LTR37B LTR ERV1 45 388 -80 233 241 13 51 chr18 28918792 28918871 -57758677 - MER46C DNA MER2_type -261 77 2 220 179 18 18 chr18 28920170 28920226 -57757322 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 21 0 0 0 chr18 28920451 28920472 -57757076 + AT_rich Low_complexity Low_complexity 1 21 0 1854 162 16 7 chr18 28921329 28921637 -57755911 + AluJo SINE Alu 2 312 0 1092 222 167 12 chr18 28922403 28922852 -57754696 + MLT1H LTR MaLR 1 549 0 309 192 39 10 chr18 28922969 28923073 -57754475 + (TTATA)n Simple_repeat Simple_repeat 2 108 0 468 317 62 27 chr18 28923350 28923574 -57753974 - MLT1L LTR MaLR -52 563 332 782 264 169 25 chr18 28923723 28923887 -57753661 - HAL1 LINE L1 -728 1779 1640 1433 177 138 84 chr18 28923887 28924293 -57753255 + MSTA LTR MaLR 1 428 0 782 264 169 25 chr18 28924293 28924971 -57752577 - HAL1 LINE L1 -867 1640 790 434 218 0 0 chr18 28925355 28925433 -57752115 + MLT1B LTR MaLR 1 78 -312 6531 139 47 11 chr18 28925433 28925652 -57751896 - Tigger3b DNA MER2_type -1798 1230 1020 1763 188 15 12 chr18 28925652 28925992 -57751556 + MER2 DNA MER2_type 1 341 -3 6531 139 47 11 chr18 28925992 28926075 -57751473 - Tigger3b DNA MER2_type -2008 1020 941 1799 154 45 63 chr18 28926075 28926457 -57751091 + THE1C LTR MaLR 1 375 0 6531 139 47 11 chr18 28926457 28927338 -57750210 - Tigger3b DNA MER2_type -2087 941 3 1678 135 18 55 chr18 28927339 28927665 -57749883 + MLT1B LTR MaLR 77 390 0 2655 147 9 5 chr18 28927690 28928113 -57749435 - MER61B LTR ERV1 0 425 1 244 365 12 0 chr18 28928298 28928383 -57749165 + LTR16C LTR ERVL 189 274 -217 838 205 35 6 chr18 28928517 28928688 -57748860 + FRAM SINE Alu 1 176 0 2046 146 57 31 chr18 28928706 28929131 -57748417 - LTR23 LTR ERV1 0 437 2 1163 223 66 63 chr18 28929702 28930184 -57747364 - LTR48B LTR ERV1 -16 771 130 324 280 0 34 chr18 28930156 28930274 -57747274 - MER34 LTR ERV1 -428 114 1 * 225 350 26 8 chr18 28930598 28930715 -57746833 + L2 LINE L2 3194 3312 -1 776 63 45 9 chr18 28931169 28931280 -57746268 - L1PA11 LINE L1 0 6174 6060 2243 105 3 0 chr18 28932043 28932338 -57745210 - AluSp SINE Alu -17 296 1 180 111 0 0 chr18 28932584 28932611 -57744937 + (CA)n Simple_repeat Simple_repeat 1 27 0 390 21 0 0 chr18 28933991 28934038 -57743510 + (TG)n Simple_repeat Simple_repeat 2 48 0 2305 146 20 77 chr18 28935633 28936128 -57741420 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr18 28936151 28936173 -57741375 + AT_rich Low_complexity Low_complexity 1 22 0 524 307 102 11 chr18 28936452 28936726 -57740822 - L3b LINE CR1 -181 1402 1104 2309 114 0 0 chr18 28936963 28937270 -57740278 - AluSc SINE Alu -2 307 1 1942 159 38 31 chr18 28937445 28937992 -57739556 - MLT2A2 LTR ERVL 0 554 1 1540 182 28 47 chr18 28938447 28938765 -57738783 - AluJo SINE Alu 0 312 1 240 35 0 0 chr18 28938926 28938955 -57738593 + (ATG)n Simple_repeat Simple_repeat 2 30 0 472 280 81 22 chr18 28938962 28939146 -57738402 - MIR SINE MIR -13 249 51 204 154 0 26 chr18 28939628 28939667 -57737881 + CT-rich Low_complexity Low_complexity 1 38 0 643 226 116 0 chr18 28939754 28939918 -57737630 - MER58A DNA MER1_type -5 219 37 940 137 50 12 chr18 28939986 28940147 -57737401 + THE1C LTR MaLR 1 167 -208 23676 41 42 2 chr18 28940163 28943307 -57734241 + L1P LINE L1 2 3271 -2875 287 354 82 31 chr18 28944071 28944266 -57733282 + L2 LINE L2 3063 3267 -5 3312 68 5 0 chr18 28944609 28945036 -57732512 - L1PA7 LINE L1 -1 6153 5725 357 245 71 0 chr18 28945510 28945608 -57731940 + MIR SINE MIR 75 179 -83 2195 102 32 0 chr18 28945716 28946001 -57731547 - AluSg SINE Alu -15 295 2 233 296 0 0 chr18 28946782 28946836 -57730712 - L2 LINE L2 -5 3267 3214 336 325 104 6 chr18 28948030 28948193 -57729355 + MIR3 SINE MIR 10 188 -20 408 167 56 11 chr18 28948249 28948339 -57729209 - MER67A LTR ERV1 0 543 450 685 216 36 26 chr18 28948367 28948742 -57728806 - MER67C LTR ERV1 -257 257 1 709 187 151 63 chr18 28949686 28949956 -57727592 - MER69 DNA AcHobo -1 2525 2219 2052 133 10 0 chr18 28949956 28950256 -57727292 - AluSx SINE Alu -9 303 1 709 187 151 63 chr18 28950256 28950317 -57727231 - MER69 DNA AcHobo -307 2219 2165 1133 209 63 4 chr18 28950325 28950593 -57726955 - MER58B DNA MER1_type -8 333 50 816 248 93 38 chr18 28950615 28951164 -57726384 - MER69 DNA AcHobo -349 2177 1599 863 297 22 7 chr18 28951217 28951486 -57726062 - MER69 DNA AcHobo -785 441 169 21 36 0 0 chr18 28952965 28952993 -57724555 + AT_rich Low_complexity Low_complexity 1 28 0 32 0 0 0 chr18 28954840 28954872 -57722676 + AT_rich Low_complexity Low_complexity 1 32 0 271 362 0 21 chr18 28955667 28955761 -57721787 - L3 LINE CR1 -124 1453 1362 564 300 58 61 chr18 28955943 28956273 -57721275 - L3 LINE CR1 -607 970 642 563 336 157 14 chr18 28956335 28956781 -57720767 - L2 LINE L2 0 3313 2804 387 368 22 0 chr18 28956822 28956958 -57720590 - L3 LINE CR1 -1033 544 406 287 327 10 0 chr18 28957904 28958008 -57719540 + MIR3 SINE MIR 98 202 -6 258 348 19 50 chr18 28960835 28960996 -57716552 + MER5B DNA MER1_type 1 156 -22 183 80 0 0 chr18 28962895 28962920 -57714628 + (GGGA)n Simple_repeat Simple_repeat 2 26 0 1385 137 44 4 chr18 28963009 28963236 -57714312 + AluJb SINE Alu 1 236 -76 180 0 0 0 chr18 28965317 28965337 -57712211 + (ATG)n Simple_repeat Simple_repeat 1 20 0 228 233 0 133 chr18 28965398 28965488 -57712060 - MER5B DNA MER1_type -100 78 1 303 303 147 28 chr18 28965806 28965896 -57711652 - L2 LINE L2 -38 3275 3197 1271 190 87 35 chr18 28965896 28966243 -57711305 - MLT1A1 LTR MaLR 0 365 1 303 303 147 28 chr18 28966243 28966370 -57711178 - L2 LINE L2 -116 3197 3032 520 293 12 30 chr18 28966410 28966577 -57710971 - L2 LINE L2 -765 2549 2386 197 383 34 0 chr18 28966571 28966720 -57710828 - MIR SINE MIR -94 168 15 * 318 229 29 0 chr18 28967293 28967363 -57710185 - L2 LINE L2 -15 3257 3186 386 240 13 0 chr18 28967450 28967525 -57710023 + L2 LINE L2 3155 3230 -42 213 296 148 17 chr18 28967952 28968067 -57709481 - MIR SINE MIR -6 256 127 375 370 50 18 chr18 28968220 28968498 -57709050 + L3 LINE CR1 703 989 -588 1163 204 78 56 chr18 28968639 28969074 -57708474 - MER39 LTR ERV1 -5 674 259 266 201 18 24 chr18 28969046 28969142 -57708406 - MER34 LTR ERV1 -422 120 6 * 216 183 70 42 chr18 28969196 28969267 -57708281 - MIR SINE MIR -115 147 75 488 316 41 15 chr18 28969309 28969505 -57708043 - MIR SINE MIR -29 233 33 29 0 0 0 chr18 28969661 28969690 -57707858 + AT_rich Low_complexity Low_complexity 1 29 0 1794 118 62 14 chr18 28969739 28970027 -57707521 + AluSq SINE Alu 1 302 -11 482 90 0 0 chr18 28970109 28970176 -57707372 + L1PA10 LINE L1 5811 5877 -291 198 0 0 0 chr18 28970302 28970324 -57707224 + (A)n Simple_repeat Simple_repeat 1 22 0 248 278 175 10 chr18 28971937 28972034 -57705514 - MIR SINE MIR -75 187 75 212 267 0 0 chr18 28972172 28972217 -57705331 - MIR SINE MIR -215 47 3 216 0 0 0 chr18 28972762 28972786 -57704762 + (T)n Simple_repeat Simple_repeat 1 24 0 12034 34 6 1 chr18 28974280 28975817 -57701731 + L1P LINE L1 3498 5041 -1105 490 237 53 23 chr18 29176998 29177129 -57500419 + MER5B DNA MER1_type 40 174 -4 2380 86 0 10 chr18 29178204 29178508 -57499040 + AluSg SINE Alu 1 301 -9 381 294 52 52 chr18 29178715 29178868 -57498680 - MIR3 SINE MIR -18 190 38 3262 21 0 0 chr18 29179773 29180157 -57497391 - L1P LINE L1 -869 5277 4894 * 8211 23 1 0 chr18 29180155 29181116 -57496432 + L1P LINE L1 3959 4920 -1226 356 322 20 27 chr18 29181117 29181266 -57496282 + MIR3 SINE MIR 54 201 -7 190 245 31 71 chr18 29182105 29182203 -57495345 + MIR3 SINE MIR 103 196 -12 217 200 0 0 chr18 29182415 29182455 -57495093 + MIR3 SINE MIR 151 190 -18 1620 114 37 87 chr18 29182876 29183202 -57494346 + AluSq SINE Alu 1 311 0 226 353 118 22 chr18 29184217 29184353 -57493195 + L2 LINE L2 3116 3264 -8 4353 189 30 37 chr18 29185356 29186536 -57491012 + L1MA9 LINE L1 4600 5785 -527 180 111 0 0 chr18 29186536 29186563 -57490985 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 4353 189 30 37 chr18 29186563 29187051 -57490497 + L1MA9 LINE L1 5785 6275 -37 229 301 14 14 chr18 29189727 29189800 -57487748 - MIR SINE MIR -80 182 110 444 278 40 7 chr18 29189821 29189972 -57487576 - MIR SINE MIR -30 232 77 538 168 0 168 chr18 29191023 29191190 -57486358 - MER90 LTR ERV1 0 614 476 2255 97 3 7 chr18 29191197 29191495 -57486053 + AluSc SINE Alu 1 297 -12 1402 223 47 13 chr18 29191508 29191826 -57485722 - MER90 LTR ERV1 -240 335 7 544 294 119 0 chr18 29191895 29192096 -57485452 - MIR SINE MIR -20 242 18 800 168 20 56 chr18 29192349 29192545 -57485003 + MER53 DNA DNA 1 189 0 471 185 17 8 chr18 29194305 29194424 -57483124 - L1MB8 LINE L1 0 6178 6059 2286 222 60 62 chr18 29194425 29195647 -57481901 - L1MCa LINE L1 -4850 1195 414 1072 242 62 59 chr18 29195647 29196019 -57481529 - MLT1A2 LTR MaLR -1 373 1 2286 222 60 62 chr18 29196019 29196183 -57481365 - L1MCa LINE L1 -5631 414 251 1363 179 8 4 chr18 29196183 29196423 -57481125 + MLT2C2 LTR ERVL 1 241 -223 396 0 0 0 chr18 29196426 29196470 -57481078 + (TG)n Simple_repeat Simple_repeat 1 44 0 613 270 16 64 chr18 29196574 29196860 -57480688 - L1MCa LINE L1 -5792 344 3 2719 74 14 0 chr18 29196888 29197238 -57480310 - THE1A LTR MaLR 0 355 1 11662 96 4 2 chr18 29197238 29198814 -57478734 - THE1A-int LTR MaLR 0 1580 1 2597 63 18 0 chr18 29198814 29199146 -57478402 - THE1A LTR MaLR 0 355 18 621 233 35 0 chr18 29199160 29199332 -57478216 - L1MB8 LINE L1 -289 5889 5712 1908 237 58 83 chr18 29199371 29199719 -57477829 - L1ME1 LINE L1 -41 6385 6030 3723 224 42 8 chr18 29199719 29200553 -57476995 - MER21B LTR ERV1 -1 862 1 1908 237 58 83 chr18 29200553 29201177 -57476371 - L1ME1 LINE L1 -396 6030 5448 825 266 19 27 chr18 29201180 29201439 -57476109 - L1ME1 LINE L1 -1853 4553 4297 1851 167 20 3 chr18 29201452 29201746 -57475802 + AluSg SINE Alu 1 299 -11 1015 202 46 17 chr18 29201755 29201993 -57475555 + AluJo SINE Alu 4 248 -64 1922 265 62 18 chr18 29202063 29202105 -57475443 - L1ME1 LINE L1 -2129 4277 4238 1103 212 99 68 chr18 29202105 29202459 -57475089 - MLT1A1 LTR MaLR 0 365 1 1922 265 62 18 chr18 29202459 29203178 -57474370 - L1ME1 LINE L1 -2168 4238 3483 250 274 123 7 chr18 29203218 29203364 -57474184 + MER20B DNA MER1_type 620 782 -1 351 149 4 0 chr18 29203515 29203595 -57473953 - L1M4 LINE L1 -2910 3236 3155 524 262 28 0 chr18 29203735 29203876 -57473672 - L1M4 LINE L1 -3351 2795 2651 * 1062 242 135 40 chr18 29203844 29204649 -57472899 - L1ME1 LINE L1 -4757 1649 777 332 302 16 32 chr18 29205288 29205477 -57472071 + L1MC4a LINE L1 2436 2621 -3525 1678 139 34 4 chr18 29205502 29205768 -57471780 + AluSx SINE Alu 33 306 -6 503 309 47 29 chr18 29206071 29206346 -57471202 + L1ME3A LINE L1 5566 5845 -325 2290 262 43 23 chr18 29206374 29206992 -57470556 + L1MC4a LINE L1 4637 4834 -1312 6649 113 45 69 chr18 29206992 29208253 -57469295 + Tigger3b DNA MER2_type 1 1231 0 2290 262 43 23 chr18 29208253 29208827 -57468721 + L1MC4a LINE L1 4834 5395 -751 4465 212 94 20 chr18 29208934 29209341 -57468207 + L1MC4a LINE L1 6172 6547 -1261 210 105 0 0 chr18 29209341 29209379 -57468169 + (TG)n Simple_repeat Simple_repeat 1 38 0 4465 212 94 20 chr18 29209379 29210192 -57467356 + L1MC4a LINE L1 6547 7483 -325 818 217 40 48 chr18 29210204 29210453 -57467095 + L1MD3 LINE L1 7749 7995 0 2458 63 3 28 chr18 29210459 29210776 -57466772 + AluY SINE Alu 1 309 -2 21 0 0 0 chr18 29211531 29211552 -57465996 + AT_rich Low_complexity Low_complexity 1 21 0 315 209 0 114 chr18 29211570 29211675 -57465873 + L1MC4 LINE L1 6614 6706 -1336 302 209 19 95 chr18 29211591 29211696 -57465852 - L1MC4 LINE L1 -1334 6708 6612 * 631 314 57 14 chr18 29212301 29212597 -57464951 - MARNA DNA Mariner -56 530 222 440 286 0 0 chr18 29213567 29213672 -57463876 + MIR SINE MIR 157 261 -1 236 308 87 0 chr18 29214516 29214620 -57462928 - L2 LINE L2 -22 3291 3179 1803 33 0 0 chr18 29215623 29215838 -57461710 - L1PA5 LINE L1 -1 6153 5939 909 222 42 27 chr18 29215838 29216099 -57461449 - L1MC4 LINE L1 -135 7907 7643 6931 55 15 0 chr18 29216233 29217452 -57460096 - L1PA7 LINE L1 0 6154 4926 798 232 84 17 chr18 29217455 29217800 -57459748 - L1M4 LINE L1 -784 5362 4995 992 130 7 0 chr18 29217804 29217958 -57459590 - Tigger1 DNA MER2_type -113 2305 2151 1174 299 137 14 chr18 29217979 29218767 -57458781 - L1ME LINE L1 -4759 2379 1342 445 312 162 41 chr18 29218874 29219406 -57458142 - L1ME LINE L1 -5474 1473 878 183 318 168 9 chr18 29219818 29219925 -57457623 + L2 LINE L2 3140 3263 -9 410 316 7 15 chr18 29220380 29220516 -57457032 - MIR SINE MIR -11 251 117 212 237 0 0 chr18 29224350 29224388 -57453160 + polypurine Low_complexity Low_complexity 1 38 0 194 88 0 29 chr18 29225492 29225526 -57452022 + (TTAA)n Simple_repeat Simple_repeat 2 34 0 246 348 98 61 chr18 29225598 29225937 -57451611 + L2 LINE L2 2673 3043 -229 2189 133 88 18 chr18 29225937 29226337 -57451211 - MSTA LTR MaLR 0 428 1 246 348 98 61 chr18 29226337 29226565 -57450983 + L2 LINE L2 3043 3261 -11 1565 177 7 37 chr18 29227324 29227623 -57449925 - AluJb SINE Alu -17 295 6 338 331 30 30 chr18 29228072 29228205 -57449343 + MIR SINE MIR 12 144 -118 2560 132 34 5 chr18 29228673 29229089 -57448459 + MSTA LTR MaLR 1 428 0 2576 53 0 0 chr18 29230631 29230933 -57446615 - AluY SINE Alu -9 302 1 331 347 83 0 chr18 29232009 29232130 -57445418 - MIR SINE MIR -117 145 15 398 283 26 40 chr18 29232859 29233011 -57444537 + MIR SINE MIR 19 168 -94 322 213 0 0 chr18 29233045 29233106 -57444442 - HsTC2 DNA Tc2 -610 1288 1228 1290 199 28 24 chr18 29234328 29234615 -57442933 + AluJo SINE Alu 1 288 -24 252 0 0 0 chr18 29235017 29235045 -57442503 + (T)n Simple_repeat Simple_repeat 1 28 0 343 236 111 50 chr18 29236423 29236622 -57440926 + L1MC4 LINE L1 3729 3939 -2207 183 148 16 82 chr18 29237340 29237522 -57440026 + (TATATG)n Simple_repeat Simple_repeat 6 175 0 454 296 64 39 chr18 29238275 29238603 -57438945 + L1MC4 LINE L1 5272 5615 -556 746 241 85 35 chr18 29239029 29239348 -57438200 + L1MC4 LINE L1 5607 5941 -1867 25 51 0 0 chr18 29239525 29239564 -57437984 + AT_rich Low_complexity Low_complexity 1 39 0 203 171 0 0 chr18 29240936 29240977 -57436571 + A-rich Low_complexity Low_complexity 1 41 0 395 234 298 19 chr18 29243163 29243368 -57434180 + MIR SINE MIR 1 262 0 475 307 48 61 chr18 29243891 29244184 -57433364 + MLT1I LTR MaLR 90 378 -31 308 299 0 31 chr18 29244628 29244725 -57432823 + L2 LINE L2 2566 2659 -655 329 0 0 24 chr18 29245220 29245262 -57432286 + (TCCA)n Simple_repeat Simple_repeat 1 41 0 189 320 165 48 chr18 29245274 29245356 -57432192 + L2 LINE L2 3022 3093 -179 1771 161 7 16 chr18 29245356 29245661 -57431887 - AluJb SINE Alu -10 302 1 189 320 165 48 chr18 29245661 29245784 -57431764 + L2 LINE L2 3093 3251 -21 632 226 46 74 chr18 29246101 29246318 -57431230 - MIR SINE MIR -7 255 45 21 57 0 0 chr18 29246348 29246383 -57431165 + AT_rich Low_complexity Low_complexity 1 35 0 225 279 13 0 chr18 29246530 29246609 -57430939 + (TA)n Simple_repeat Simple_repeat 2 81 0 334 287 21 0 chr18 29246611 29246705 -57430843 - L1MC4 LINE L1 -1339 6703 6608 305 283 22 11 chr18 29246664 29246756 -57430792 + L1MC4 LINE L1 6611 6703 -1339 * 2281 132 16 29 chr18 29246774 29247154 -57430394 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr18 29247582 29247603 -57429945 + AT_rich Low_complexity Low_complexity 1 21 0 851 185 0 0 chr18 29247977 29248123 -57429425 + FRAM SINE Alu 1 146 -30 291 28 0 0 chr18 29248128 29248164 -57429384 + (CA)n Simple_repeat Simple_repeat 2 37 0 226 211 0 0 chr18 29249155 29249207 -57428341 + (CA)n Simple_repeat Simple_repeat 1 52 0 387 350 133 18 chr18 29249358 29249741 -57427807 - L2 LINE L2 -35 3237 2811 862 132 0 22 chr18 29249925 29250061 -57427487 + AluJb SINE Alu 1 133 -179 734 228 107 15 chr18 29252091 29252288 -57425260 + MER58C DNA MER1_type 1 215 0 586 284 77 27 chr18 29252725 29252947 -57424601 - MIR SINE MIR -9 253 21 534 295 83 18 chr18 29253104 29253321 -57424227 - MIR SINE MIR -25 237 7 1767 131 14 21 chr18 29253831 29254114 -57423434 + AluSg SINE Alu 30 310 0 399 254 203 34 chr18 29254594 29254771 -57422777 + Charlie8 DNA MER1_type 27 233 -2184 197 270 0 63 chr18 29256119 29256182 -57421366 - L2 LINE L2 0 3313 3255 401 317 61 6 chr18 29256203 29256367 -57421181 - MIR SINE MIR -6 256 84 2071 91 59 0 chr18 29257834 29258121 -57419427 + AluSq SINE Alu 1 304 -9 21 36 0 0 chr18 29258121 29258149 -57419399 + AT_rich Low_complexity Low_complexity 1 28 0 326 292 0 0 chr18 29258682 29258754 -57418794 + MIR SINE MIR 47 118 -144 623 209 15 126 chr18 29258830 29259036 -57418512 - MER58A DNA MER1_type -6 218 36 2397 79 0 0 chr18 29259055 29259346 -57418202 + AluSg SINE Alu 1 291 -19 182 283 0 19 chr18 29260501 29260554 -57416994 + MIR SINE MIR 7 58 -204 357 326 112 35 chr18 29260811 29261096 -57416452 - L2 LINE L2 -9 3263 2957 800 239 47 75 chr18 29261853 29262175 -57415373 + MLT1J1 LTR MaLR 133 445 -1 493 313 43 21 chr18 29262324 29262557 -57414991 - MER102a DNA MER1_type 0 330 93 2007 187 6 6 chr18 29262691 29263050 -57414498 + MLT1A1 LTR MaLR 1 359 -6 2698 204 232 23 chr18 29263489 29264342 -57413206 - LTR28 LTR ERV1 0 1020 1 221 272 18 132 chr18 29264707 29264821 -57412727 + MIR SINE MIR 147 247 -15 1584 251 75 58 chr18 29266331 29266765 -57410783 + L1ME3 LINE L1 4665 5090 -1072 1666 164 21 25 chr18 29266765 29267051 -57410497 - AluJb SINE Alu -23 289 5 1584 251 75 58 chr18 29267051 29267987 -57409561 + L1ME3 LINE L1 5090 6074 -88 269 268 107 67 chr18 29268007 29268410 -57409138 + L1MCc LINE L1 20 438 -5985 180 365 0 0 chr18 29269688 29269751 -57407797 + MIR SINE MIR 23 85 -177 308 376 58 10 chr18 29270188 29270393 -57407155 + MIR SINE MIR 47 261 -1 303 377 8 0 chr18 29270623 29270745 -57406803 + L2 LINE L2 3187 3309 -4 21 36 0 0 chr18 29271079 29271107 -57406441 + AT_rich Low_complexity Low_complexity 1 28 0 194 344 31 21 chr18 29274573 29274669 -57402879 - MIR SINE MIR -159 103 7 235 247 13 52 chr18 29274772 29274849 -57402699 - MIR SINE MIR -121 141 68 212 316 116 0 chr18 29275086 29275181 -57402367 - MIR SINE MIR -120 142 37 207 0 0 0 chr18 29275318 29275341 -57402207 + (CATA)n Simple_repeat Simple_repeat 2 24 0 379 316 65 49 chr18 29275835 29276082 -57401466 - MIR SINE MIR -10 252 2 527 281 69 10 chr18 29279708 29279911 -57397637 - MIR SINE MIR -40 222 8 1903 81 0 12 chr18 29282117 29282365 -57395183 + AluSg SINE Alu 59 303 -7 554 154 118 0 chr18 29283364 29283474 -57394074 + MER20 DNA MER1_type 96 218 -1 187 258 11 108 chr18 29283720 29283813 -57393735 + L2 LINE L2 3227 3310 -3 292 188 188 30 chr18 29283998 29284131 -57393417 + MER113 DNA MER1_type? 70 223 -298 318 303 18 18 chr18 29284303 29284412 -57393136 - L2 LINE L2 -2 3270 3162 372 80 0 0 chr18 29284531 29284581 -57392967 + MADE1 DNA Mariner 1 50 -30 2463 58 0 0 chr18 29284845 29285140 -57392408 - AluY SINE Alu -16 295 1 261 269 39 0 chr18 29285141 29285219 -57392329 + MIR SINE MIR 88 168 -94 787 239 53 16 chr18 29285282 29285529 -57392019 - MIR SINE MIR 0 262 7 1566 147 33 29 chr18 29285644 29285916 -57391632 - AluJb SINE Alu -10 302 30 229 227 0 0 chr18 29286694 29286760 -57390788 + L1MC4 LINE L1 6640 6705 -1337 2092 112 49 25 chr18 29286794 29287160 -57390388 + THE1C LTR MaLR 1 375 0 1853 138 7 0 chr18 29287161 29287436 -57390112 - AluJb SINE Alu -35 277 1 473 268 83 19 chr18 29287436 29287593 -57389955 - MIR SINE MIR -49 213 47 675 335 85 17 chr18 29287930 29288282 -57389266 - L3b LINE CR1 -4 1579 1204 567 233 62 7 chr18 29291209 29291355 -57386193 + L2 LINE L2 3160 3313 0 22 35 0 0 chr18 29291647 29291676 -57385872 + AT_rich Low_complexity Low_complexity 1 29 0 433 267 88 37 chr18 29293216 29293433 -57384115 - MIR SINE MIR -23 239 12 1413 85 0 40 chr18 29293471 29293671 -57383877 + AluSx SINE Alu 1 192 -120 1871 135 0 41 chr18 29294295 29294614 -57382934 - AluSx SINE Alu -6 306 1 1826 70 8 0 chr18 29295095 29295336 -57382212 + L1PA6 LINE L1 5912 6154 0 239 284 111 24 chr18 29295340 29295616 -57381932 + L1P LINE L1 4747 5038 -1108 1714 83 76 38 chr18 29297249 29297513 -57380035 - AluY SINE Alu -18 293 20 249 175 0 35 chr18 29299656 29299713 -57377835 + L2 LINE L2 3259 3313 0 22 0 0 0 chr18 29300619 29300641 -57376907 + AT_rich Low_complexity Low_complexity 1 22 0 26 30 0 0 chr18 29301178 29301211 -57376337 + AT_rich Low_complexity Low_complexity 1 33 0 187 369 0 36 chr18 29302260 29302344 -57375204 + L2 LINE L2 2568 2648 -666 214 296 71 20 chr18 29303113 29303211 -57374337 - MIR SINE MIR -34 228 126 3116 221 26 12 chr18 29303431 29304285 -57373263 - L1PB1 LINE L1 -2222 3924 3059 2706 183 28 111 chr18 29304285 29305251 -57372297 + L1PB1 LINE L1 3928 4813 -1333 * 4402 119 57 16 chr18 29305232 29305986 -57371562 + L1PB1 LINE L1 5360 6144 -7 413 206 9 0 chr18 29305993 29306100 -57371448 + GA-rich Low_complexity Low_complexity 2 109 0 22 56 0 0 chr18 29306981 29307017 -57370531 + AT_rich Low_complexity Low_complexity 1 36 0 1205 204 96 4 chr18 29307383 29307663 -57369885 + L1MC2 LINE L1 6031 6336 -8 1856 147 17 7 chr18 29310018 29310311 -57367237 - AluSx SINE Alu -16 296 1 33 66 0 0 chr18 29311115 29311176 -57366372 + AT_rich Low_complexity Low_complexity 1 61 0 24 77 0 0 chr18 29311250 29311302 -57366246 + AT_rich Low_complexity Low_complexity 1 52 0 248 246 0 16 chr18 29311544 29311605 -57365943 + GA-rich Low_complexity Low_complexity 4 63 0 1937 128 10 3 chr18 29311927 29312242 -57365306 + AluSx SINE Alu 1 317 0 692 154 24 0 chr18 29312302 29312425 -57365123 - L1MA6 LINE L1 -2 6298 6173 317 283 44 0 chr18 29312426 29312539 -57365009 + L1MA6 LINE L1 6049 6166 -134 23 0 0 0 chr18 29312558 29312581 -57364967 + AT_rich Low_complexity Low_complexity 1 23 0 324 146 85 24 chr18 29313331 29313413 -57364135 - Charlie5 DNA MER1_type 0 2620 2534 315 336 75 65 chr18 29313507 29313906 -57363642 + MLT1I LTR MaLR 5 407 -2 206 254 16 0 chr18 29317174 29317237 -57360311 + A-rich Low_complexity Low_complexity 2 65 0 198 71 0 0 chr18 29317385 29317413 -57360135 + (CTGGGG)n Simple_repeat Simple_repeat 2 29 0 1362 287 171 25 chr18 29317581 29318330 -57359218 + L2 LINE L2 2081 2938 -376 252 86 0 0 chr18 29320171 29320206 -57357342 + (TG)n Simple_repeat Simple_repeat 2 36 0 280 331 134 38 chr18 29320777 29320934 -57356614 + MIR3 SINE MIR 16 187 -21 21 36 0 0 chr18 29321104 29321132 -57356416 + AT_rich Low_complexity Low_complexity 1 28 0 223 98 59 0 chr18 29321350 29321401 -57356147 + A-rich Low_complexity Low_complexity 6 59 0 1866 146 11 0 chr18 29324833 29325114 -57352434 + AluJb SINE Alu 1 284 -28 492 48 0 0 chr18 29325114 29325177 -57352371 + (TG)n Simple_repeat Simple_repeat 1 63 0 186 325 137 39 chr18 29325312 29325546 -57352002 - L3b LINE CR1 -225 1358 1102 317 246 5 14 chr18 29326172 29326252 -57351296 - MIR SINE MIR -65 143 67 25 0 0 0 chr18 29328599 29328624 -57348924 + AT_rich Low_complexity Low_complexity 1 25 0 506 191 0 0 chr18 29329247 29329336 -57348212 - L2 LINE L2 0 3313 3225 2647 82 3 16 chr18 29329787 29330151 -57347397 + L1PB2 LINE L1 5782 6140 -11 270 73 0 0 chr18 29330151 29330192 -57347356 + (TA)n Simple_repeat Simple_repeat 1 41 0 2094 118 0 23 chr18 29330566 29330872 -57346676 - AluSx SINE Alu -13 299 1 404 318 69 11 chr18 29331358 29331509 -57346039 + MIR SINE MIR 51 217 -45 234 0 0 0 chr18 29331509 29331535 -57346013 + (TG)n Simple_repeat Simple_repeat 2 27 0 404 318 69 11 chr18 29331535 29331572 -57345976 + MIR SINE MIR 217 250 -12 298 344 45 19 chr18 29332170 29332327 -57345221 + L2 LINE L2 2890 3050 -222 220 333 0 0 chr18 29332436 29332502 -57345046 + L2 LINE L2 3206 3271 -1 2577 48 0 3 chr18 29334240 29334551 -57342997 + AluY SINE Alu 1 310 -1 195 42 0 0 chr18 29334707 29334731 -57342817 + (A)n Simple_repeat Simple_repeat 1 24 0 401 301 144 6 chr18 29334911 29335084 -57342464 - MIR SINE MIR -12 250 54 368 241 89 9 chr18 29336903 29337046 -57340502 + MLT1G1 LTR MaLR 281 405 -4 420 309 118 11 chr18 29337235 29337413 -57340135 - MIR SINE MIR -12 250 54 2044 156 34 21 chr18 29339667 29340046 -57337502 + MLT1B LTR MaLR 2 385 -5 259 114 114 0 chr18 29340280 29340324 -57337224 + LTR54 LTR ERV1 51 99 -411 302 262 176 4 chr18 29340335 29340544 -57337004 + MER57B LTR ERV1 108 347 -56 275 188 16 0 chr18 29340518 29340582 -57336966 + LTR54 LTR ERV1 427 491 -19 * 434 321 75 5 chr18 29340659 29340846 -57336702 + MER57-int LTR ERV1 1946 2145 -4186 768 179 241 0 chr18 29341705 29341900 -57335648 + MER34C LTR ERV1 68 309 -276 1658 153 45 17 chr18 29341913 29342200 -57335348 - THE1B LTR MaLR -69 295 1 349 176 0 0 chr18 29342269 29342337 -57335211 + MER57-int LTR ERV1 1123 1190 -3681 339 171 80 85 chr18 29342317 29342493 -57335055 + MER57-int LTR ERV1 2565 2739 -4019 * 3712 203 81 122 chr18 29342580 29344217 -57333331 + MER57-int LTR ERV1 1843 3545 -3992 2008 143 3 7 chr18 29344217 29344518 -57333030 + AluSx SINE Alu 1 300 -12 3712 203 81 122 chr18 29344518 29345454 -57332094 + MER57-int LTR ERV1 3545 6205 -1332 2074 230 28 28 chr18 29345668 29346177 -57331371 + MER57-int LTR ERV1 6635 7143 -394 482 212 126 14 chr18 29346180 29346542 -57331006 + LTR54 LTR ERV1 24 510 0 220 308 11 11 chr18 29346543 29346634 -57330914 + (TA)n Simple_repeat Simple_repeat 1 91 0 988 247 115 43 chr18 29346635 29347033 -57330515 - L1MC5 LINE L1 -382 7579 7132 1981 139 3 3 chr18 29347033 29347320 -57330228 - AluSx SINE Alu -25 287 1 988 247 115 43 chr18 29347320 29347451 -57330097 - L1MC5 LINE L1 -829 7132 7012 648 239 113 0 chr18 29347563 29347722 -57329826 - L1MC5 LINE L1 -1149 6812 6636 1428 150 146 8 chr18 29348195 29348448 -57329100 + AluSx SINE Alu 1 288 -14 2440 101 46 0 chr18 29348480 29348825 -57328723 - THE1B LTR MaLR -3 361 1 479 263 28 50 chr18 29348825 29349004 -57328544 - L1MC5 LINE L1 -1947 5861 5687 2003 126 3 0 chr18 29349525 29349811 -57327737 + AluSx SINE Alu 1 287 -25 668 167 80 33 chr18 29351113 29351263 -57326285 - FRAM SINE Alu -19 157 1 21 36 0 0 chr18 29351371 29351399 -57326149 + AT_rich Low_complexity Low_complexity 1 28 0 299 180 49 0 chr18 29351728 29351789 -57325759 - MER69 DNA AcHobo -2461 65 2 2207 126 30 61 chr18 29354034 29354494 -57323054 - L1MB8 LINE L1 -5 6173 5728 187 268 0 36 chr18 29354663 29354719 -57322829 + MIR SINE MIR 91 144 -64 465 304 67 0 chr18 29354854 29355048 -57322500 - LTR33 LTR ERVL -284 237 31 334 205 236 31 chr18 29357129 29357290 -57320258 - MIR SINE MIR -50 212 19 222 263 110 61 chr18 29358801 29359029 -57318519 + L2 LINE L2 1875 2113 -1201 562 306 23 27 chr18 29360537 29360773 -57316775 + MIR SINE MIR 1 227 -35 24 67 0 0 chr18 29360884 29360929 -57316619 + AT_rich Low_complexity Low_complexity 1 45 0 1012 93 8 0 chr18 29361248 29361377 -57316171 - AluSq/x SINE Alu -181 132 3 21 71 0 0 chr18 29361463 29361505 -57316043 + AT_rich Low_complexity Low_complexity 1 42 0 264 270 81 27 chr18 29361765 29361876 -57315672 + MIR SINE MIR 24 140 -68 201 284 57 71 chr18 29361900 29362041 -57315507 - L2 LINE L2 0 3313 3175 640 296 22 48 chr18 29363116 29363346 -57314202 + MIR SINE MIR 24 247 -15 1683 62 0 9 chr18 29363372 29363597 -57313951 - L1PA5 LINE L1 0 6154 5932 2305 110 0 0 chr18 29364442 29364751 -57312797 + AluSx SINE Alu 1 309 -3 205 240 67 53 chr18 29367821 29367896 -57309652 + MIR SINE MIR 71 146 -62 1362 195 0 15 chr18 29368977 29369238 -57308310 + AluJo SINE Alu 21 277 -35 185 296 84 14 chr18 29369678 29369749 -57307799 + L3 LINE CR1 1495 1570 -7 22 0 0 0 chr18 29370292 29370314 -57307234 + AT_rich Low_complexity Low_complexity 1 22 0 304 224 235 0 chr18 29370314 29370399 -57307149 - MIR3 SINE MIR -28 180 76 243 286 86 0 chr18 29372599 29372669 -57304879 + L2 LINE L2 3196 3271 -1 367 83 42 14 chr18 29374590 29374662 -57302886 + A-rich Low_complexity Low_complexity 2 75 0 358 293 32 32 chr18 29376615 29376738 -57300810 - L2 LINE L2 0 3272 3150 1566 159 206 0 chr18 29378665 29378986 -57298562 - MLT1B LTR MaLR -3 387 1 27 49 0 0 chr18 29379445 29379486 -57298062 + AT_rich Low_complexity Low_complexity 1 41 0 1872 168 0 7 chr18 29381039 29381347 -57296201 + AluSx SINE Alu 1 306 -6 2589 56 0 0 chr18 29381347 29381650 -57295898 + AluY SINE Alu 1 303 -8 777 200 0 0 chr18 29382133 29382273 -57295275 + FLAM_C SINE Alu 1 140 -3 1821 167 33 0 chr18 29382370 29382670 -57294878 + AluSx SINE Alu 1 310 -2 183 323 54 21 chr18 29383038 29383131 -57294417 - L2 LINE L2 -881 2433 2338 226 288 0 0 chr18 29383154 29383220 -57294328 + L1ME LINE L1 5383 5448 -673 431 306 89 39 chr18 29383299 29383557 -57293991 + L1ME LINE L1 5545 5815 -306 25 0 0 0 chr18 29384202 29384227 -57293321 + AT_rich Low_complexity Low_complexity 1 25 0 242 200 0 0 chr18 29384237 29384277 -57293271 + Alu SINE Alu 2 41 -261 1096 191 23 2 chr18 29384329 29384606 -57292942 - MER2 DNA MER2_type 0 345 1 430 292 44 37 chr18 29384808 29385106 -57292442 + L1ME4a LINE L1 5588 5887 -234 3051 228 14 3 chr18 29385147 29385792 -57291756 + MER82 DNA MER2_type 2 653 0 29 28 0 0 chr18 29386494 29386530 -57291018 + AT_rich Low_complexity Low_complexity 1 36 0 228 67 0 0 chr18 29386837 29386867 -57290681 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1263 256 94 31 chr18 29386926 29387415 -57290133 + MLT2B1 LTR ERVL 1 520 0 417 181 3 36 chr18 29389977 29390318 -57287230 + (TA)n Simple_repeat Simple_repeat 1 329 0 193 114 0 45 chr18 29390317 29390361 -57287187 + (CA)n Simple_repeat Simple_repeat 2 43 0 * 2666 62 3 3 chr18 29390375 29390714 -57286834 - L1PA7 LINE L1 -29 6125 5787 418 45 15 15 chr18 29391537 29391603 -57285945 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 581 304 25 0 chr18 29391860 29392048 -57285500 + MIR3 SINE MIR 13 205 -3 29 28 0 0 chr18 29392407 29392443 -57285105 + AT_rich Low_complexity Low_complexity 1 36 0 2150 129 0 0 chr18 29392983 29393285 -57284263 + AluSx SINE Alu 1 302 -10 24 0 0 0 chr18 29394055 29394079 -57283469 + AT_rich Low_complexity Low_complexity 1 24 0 186 133 0 0 chr18 29394707 29394737 -57282811 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 190 353 25 33 chr18 29397633 29397755 -57279793 - MIR3 SINE MIR -82 126 6 208 269 64 26 chr18 29398330 29398408 -57279140 - MIR3 SINE MIR -19 189 109 240 338 35 71 chr18 29398489 29398687 -57278861 + MIR3 SINE MIR 13 203 -5 207 0 0 0 chr18 29399553 29399576 -57277972 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1025 146 49 15 chr18 29399983 29400188 -57277360 - Charlie5 DNA MER1_type 0 2614 2403 319 213 0 0 chr18 29400193 29400254 -57277294 - Charlie5 DNA MER1_type -2550 62 2 1700 118 72 13 chr18 29400890 29401194 -57276354 + L1MA5A LINE L1 5972 6293 -4 23 0 0 0 chr18 29401739 29401762 -57275786 + AT_rich Low_complexity Low_complexity 1 23 0 941 188 94 15 chr18 29402840 29403042 -57274506 + MER20 DNA MER1_type 2 219 0 317 325 50 45 chr18 29404554 29404754 -57272794 - MIR3 SINE MIR -6 202 2 207 0 0 0 chr18 29405439 29405462 -57272086 + (TG)n Simple_repeat Simple_repeat 1 23 0 1067 282 96 34 chr18 29406505 29406976 -57270572 + MLT1J LTR MaLR 10 509 -2 254 284 74 43 chr18 29408122 29408284 -57269264 + L2 LINE L2 1854 2020 -1294 188 217 205 36 chr18 29408482 29408565 -57268983 - L2 LINE L2 -1 3271 3175 201 309 40 91 chr18 29408835 29409010 -57268538 + L2 LINE L2 2362 2527 -787 * 256 338 15 0 chr18 29409008 29409076 -57268472 + L2 LINE L2 2990 3058 -214 210 271 29 14 chr18 29409393 29409463 -57268085 + MIR3 SINE MIR 136 206 -2 22 35 0 0 chr18 29409985 29410014 -57267534 + AT_rich Low_complexity Low_complexity 1 29 0 248 288 14 14 chr18 29412005 29412078 -57265470 - Tigger5 DNA MER2_type 0 2323 2251 * 251 211 39 0 chr18 29412049 29412101 -57265447 - Tigger5 DNA MER2_type -2269 54 1 501 291 21 0 chr18 29412495 29412636 -57264912 - MIR SINE MIR -1 261 118 227 340 72 20 chr18 29413237 29413390 -57264158 + MIR SINE MIR 66 226 -36 211 324 204 0 chr18 29413555 29413663 -57263885 - L2 LINE L2 -14 3258 3129 1417 156 74 42 chr18 29415258 29415541 -57262007 + AluJb SINE Alu 5 296 -16 1319 184 0 4 chr18 29416397 29416625 -57260923 + AluJo SINE Alu 12 238 -74 29 0 0 0 chr18 29416645 29416674 -57260874 + AT_rich Low_complexity Low_complexity 1 29 0 310 298 146 28 chr18 29416822 29417000 -57260548 + MIR SINE MIR 59 257 -5 225 0 0 0 chr18 29418524 29418549 -57258999 + (TG)n Simple_repeat Simple_repeat 1 25 0 246 241 86 0 chr18 29418797 29418855 -57258693 - L2 LINE L2 -41 3272 3210 539 292 11 11 chr18 29419050 29419235 -57258313 - MLT1L LTR MaLR -2 613 429 203 275 22 33 chr18 29419291 29419382 -57258166 + GA-rich Low_complexity Low_complexity 4 93 0 204 351 13 26 chr18 29420011 29420088 -57257460 + MIR SINE MIR 69 144 -118 2413 82 3 0 chr18 29420143 29420449 -57257099 + AluY SINE Alu 1 307 -4 1278 214 82 11 chr18 29420718 29420999 -57256549 + AluJo SINE Alu 1 301 -1 626 140 132 0 chr18 29421000 29421114 -57256434 + AluSc SINE Alu 170 298 -11 1607 189 3 7 chr18 29421281 29421572 -57255976 + AluJb SINE Alu 13 302 -10 393 213 128 43 chr18 29423664 29423805 -57253743 + MER5A DNA MER1_type 37 189 0 315 0 0 0 chr18 29424417 29424452 -57253096 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 28 71 0 0 chr18 29424580 29424636 -57252912 + AT_rich Low_complexity Low_complexity 1 56 0 219 88 0 0 chr18 29424866 29424900 -57252648 + (TG)n Simple_repeat Simple_repeat 1 34 0 776 286 181 16 chr18 29425087 29425468 -57252080 + L3 LINE CR1 822 1265 -312 272 348 42 0 chr18 29425473 29425591 -57251957 + L2 LINE L2 3191 3313 0 418 269 82 87 chr18 29425615 29425834 -57251714 + L3 LINE CR1 1279 1496 -81 210 213 33 33 chr18 29425990 29426051 -57251497 - MER5A DNA MER1_type -1 188 128 2069 268 126 24 chr18 29426062 29426945 -57250603 + L2 LINE L2 1560 2532 -782 1654 194 66 21 chr18 29426945 29427216 -57250332 + L1MB5 LINE L1 4935 5192 -982 2028 180 14 6 chr18 29427216 29427578 -57249970 + MLT1A1 LTR MaLR 1 365 0 1654 194 66 21 chr18 29427578 29427737 -57249811 + L1MB5 LINE L1 5192 5342 -832 225 65 0 0 chr18 29427737 29427768 -57249780 + (TA)n Simple_repeat Simple_repeat 1 31 0 1654 194 66 21 chr18 29427768 29428050 -57249498 + L1MB5 LINE L1 5342 5680 -494 412 217 43 26 chr18 29428058 29428173 -57249375 + L1MB5 LINE L1 5783 5899 -275 834 226 5 32 chr18 29428178 29428368 -57249180 + L1MB5 LINE L1 5982 6166 -8 782 243 211 41 chr18 29428387 29428953 -57248595 + L2 LINE L2 2538 3195 -118 365 272 19 136 chr18 29430552 29430627 -57246921 + MIR3 SINE MIR 23 71 -137 2880 79 0 3 chr18 29430627 29431018 -57246530 + L1PA8 LINE L1 5782 6171 -1 365 272 19 136 chr18 29431018 29431104 -57246444 + MIR3 SINE MIR 71 165 -43 296 282 40 46 chr18 29431354 29431528 -57246020 + L1ME LINE L1 5610 5782 -339 22 0 0 0 chr18 29434103 29434125 -57243423 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 29435080 29435104 -57242444 + AT_rich Low_complexity Low_complexity 1 24 0 295 314 145 0 chr18 29435939 29436146 -57241402 + L1ME LINE L1 5540 5776 -394 216 268 144 0 chr18 29437424 29437521 -57240027 + MIR SINE MIR 100 210 -52 215 219 137 27 chr18 29437850 29437923 -57239625 - MIR SINE MIR -20 242 162 204 339 35 63 chr18 29438020 29438074 -57239474 - L3 LINE CR1 -30 1547 1493 697 166 23 196 chr18 29438074 29438339 -57239209 + MER20 DNA MER1_type 1 219 0 204 339 35 63 chr18 29438339 29438458 -57239090 - L3 LINE CR1 -84 1493 1379 1133 196 62 21 chr18 29438631 29438922 -57238626 - MER58B DNA MER1_type 0 341 39 361 292 45 45 chr18 29438949 29439127 -57238421 - MIR SINE MIR -44 218 41 333 282 274 23 chr18 29439151 29439667 -57237881 - L2 LINE L2 0 3272 2626 493 272 7 48 chr18 29439914 29440061 -57237487 - L2 LINE L2 -202 3070 2930 317 313 17 28 chr18 29440060 29440305 -57237243 - L3 LINE CR1 -627 950 664 * 639 242 126 35 chr18 29440427 29440658 -57236890 + MIR SINE MIR 8 259 -3 266 281 122 55 chr18 29440725 29440889 -57236659 - MER5A DNA MER1_type 0 189 15 707 253 105 31 chr18 29441993 29442222 -57235326 + MIR SINE MIR 16 261 -1 461 292 93 12 chr18 29442918 29443175 -57234373 - Tigger8 DNA MER2_type -241 425 148 642 263 66 15 chr18 29444188 29444386 -57233162 - MIR SINE MIR -10 252 45 2063 174 42 32 chr18 29445443 29445949 -57231599 + Charlie1b DNA MER1_type 3 513 -10 2317 111 0 0 chr18 29446492 29446798 -57230750 - AluSx SINE Alu -6 306 1 2192 115 3 3 chr18 29448139 29448443 -57229105 + AluSx SINE Alu 1 304 -8 573 242 93 41 chr18 29449590 29449784 -57227764 + MIR SINE MIR 52 255 -7 284 298 121 28 chr18 29450001 29450216 -57227332 + L1ME3A LINE L1 5422 5656 -514 529 283 58 0 chr18 29450229 29450367 -57227181 + MER5A DNA MER1_type 42 187 -2 295 342 39 19 chr18 29450230 29450385 -57227163 - MER5A DNA MER1_type -31 158 1 * 545 244 107 15 chr18 29450401 29450606 -57226942 + L1ME3A LINE L1 5682 5905 -265 254 240 0 27 chr18 29450606 29450681 -57226867 + (TA)n Simple_repeat Simple_repeat 1 73 0 316 340 5 64 chr18 29450747 29450950 -57226598 + L1ME3A LINE L1 5972 6162 -8 588 310 130 0 chr18 29451054 29451254 -57226294 + MIR SINE MIR 25 250 -12 255 157 0 0 chr18 29451493 29451544 -57226004 + (CA)n Simple_repeat Simple_repeat 2 52 0 1631 182 0 31 chr18 29452042 29452333 -57225215 - AluJo SINE Alu -30 282 1 718 207 37 92 chr18 29452336 29452553 -57224995 - MIR SINE MIR -38 224 20 192 77 0 0 chr18 29452553 29452579 -57224969 + (T)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr18 29452991 29453015 -57224533 + (TA)n Simple_repeat Simple_repeat 2 25 0 497 251 189 4 chr18 29454351 29454594 -57222954 + L1ME3A LINE L1 5873 6160 -10 211 288 51 0 chr18 29455837 29455896 -57221652 + MIR SINE MIR 112 173 -89 2150 120 0 10 chr18 29457187 29457486 -57220062 - AluY SINE Alu -15 296 1 323 299 22 73 chr18 29457615 29457752 -57219796 - L1MC/D LINE L1 -2025 5783 5654 1909 114 34 20 chr18 29457788 29458085 -57219463 + AluSx SINE Alu 1 301 -11 261 225 0 56 chr18 29458593 29458664 -57218884 - MIR3 SINE MIR -25 183 117 309 51 0 0 chr18 29458918 29458957 -57218591 + (TG)n Simple_repeat Simple_repeat 1 39 0 27 0 0 0 chr18 29459332 29459359 -57218189 + AT_rich Low_complexity Low_complexity 1 27 0 322 319 142 38 chr18 29462313 29462601 -57214947 + L1M2 LINE L1 772 1089 -5760 304 309 144 62 chr18 29462592 29462883 -57214665 + L1MDa LINE L1 623 937 -5603 * 222 37 0 0 chr18 29463665 29463692 -57213856 + (CGCGG)n Simple_repeat Simple_repeat 5 31 0 33 56 0 0 chr18 29463747 29463801 -57213747 + GC_rich Low_complexity Low_complexity 1 54 0 258 125 0 0 chr18 29463899 29463947 -57213601 + (CGG)n Simple_repeat Simple_repeat 2 49 0 186 103 0 0 chr18 29463989 29464018 -57213530 + (TCCCC)n Simple_repeat Simple_repeat 1 29 0 331 288 139 55 chr18 29464608 29464990 -57212558 + L1M2 LINE L1 527 940 -5909 529 241 103 40 chr18 29467898 29468072 -57209476 - MIR3 SINE MIR -3 205 21 219 262 82 0 chr18 29468721 29468782 -57208766 + MIR SINE MIR 77 142 -120 257 376 73 0 chr18 29469678 29469840 -57207708 + MIR SINE MIR 13 141 -67 249 223 139 65 chr18 29471260 29471569 -57205979 - HAL1 LINE L1 -1316 1191 860 243 0 0 0 chr18 29471611 29471638 -57205910 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2090 77 42 3 chr18 29471641 29471926 -57205622 - AluY SINE Alu -15 296 1 2367 104 0 0 chr18 29472577 29472884 -57204664 + AluSc SINE Alu 1 307 -2 1206 101 0 6 chr18 29475314 29475482 -57202066 - AluSg/x SINE Alu -6 306 140 23 0 0 0 chr18 29475874 29475897 -57201651 + AT_rich Low_complexity Low_complexity 1 23 0 2152 105 3 7 chr18 29475962 29476274 -57201274 - AluSx SINE Alu 0 311 1 374 267 155 67 chr18 29476833 29477323 -57200225 - L1 LINE L1 -1314 4832 4300 1839 149 56 0 chr18 29477468 29477756 -57199792 + AluSx SINE Alu 1 304 -8 42 57 0 0 chr18 29477866 29477936 -57199612 + AT_rich Low_complexity Low_complexity 1 70 0 307 319 57 0 chr18 29477974 29478115 -57199433 - L1 LINE L1 -2204 3942 3794 1491 204 52 105 chr18 29478750 29479293 -57198255 - LTR40a LTR ERVL 0 519 6 2312 106 0 0 chr18 29479758 29480051 -57197497 - AluSg SINE Alu -17 293 1 1972 164 0 0 chr18 29480114 29480418 -57197130 - AluJb SINE Alu -8 304 1 2089 118 0 48 chr18 29480987 29481302 -57196246 + AluSx SINE Alu 1 300 -12 486 145 0 0 chr18 29481310 29481386 -57196162 - AluJb SINE Alu -35 277 202 1114 229 64 20 chr18 29481630 29481988 -57195560 - MLT1B LTR MaLR -15 375 2 437 378 59 23 chr18 29481988 29482295 -57195253 + L2 LINE L2 2925 3242 -30 21 0 0 0 chr18 29482834 29482855 -57194693 + AT_rich Low_complexity Low_complexity 1 21 0 2383 82 0 0 chr18 29483466 29483760 -57193788 - AluY SINE Alu -17 294 1 750 131 0 0 chr18 29483934 29484041 -57193507 + FLAM_C SINE Alu 1 107 -36 2135 152 5 14 chr18 29484105 29484474 -57193074 + MER47A DNA MER2_type 1 366 0 25 65 0 0 chr18 29485343 29485389 -57192159 + AT_rich Low_complexity Low_complexity 1 46 0 2080 131 0 3 chr18 29487251 29487542 -57190006 + AluSx SINE Alu 1 290 -22 882 169 68 0 chr18 29487997 29488174 -57189374 - MER5A DNA MER1_type 0 189 1 848 160 0 0 chr18 29488653 29488784 -57188764 - FLAM_C SINE Alu -1 132 2 857 299 73 48 chr18 29490211 29490427 -57187121 - ERVL LTR ERVL -2990 2774 2565 2359 82 3 0 chr18 29490427 29490719 -57186829 - AluSp SINE Alu -20 293 1 857 299 73 48 chr18 29490719 29491121 -57186427 - ERVL LTR ERVL -3199 2565 2141 404 363 39 22 chr18 29491733 29492193 -57185355 - ERVL LTR ERVL -4495 1269 802 40 49 0 0 chr18 29492604 29492665 -57184883 + AT_rich Low_complexity Low_complexity 1 61 0 2318 100 0 23 chr18 29492734 29493044 -57184504 - AluSx SINE Alu -9 303 1 5443 99 20 20 chr18 29493310 29494194 -57183354 - L1PA13 LINE L1 0 6163 5280 2209 186 38 19 chr18 29494202 29494725 -57182823 - L1P LINE L1 -2497 3649 3117 2180 171 26 40 chr18 29494801 29495228 -57182320 + MSTB LTR MaLR 1 421 -5 1360 131 58 8 chr18 29495233 29495492 -57182056 + MSTB-int LTR MaLR 1 272 -1379 1085 105 17 33 chr18 29495492 29495673 -57181875 + LTR9 LTR ERV1 1 178 -434 2477 127 34 5 chr18 29495682 29496069 -57181479 - MER48 LTR ERV1 0 398 1 12613 87 20 4 chr18 29496069 29497871 -57179677 - HERVH48 LTR ERV1 0 6654 4825 3520 107 21 1 chr18 29497881 29498940 -57178608 - HERVH48 LTR ERV1 -2429 4225 3112 1582 184 68 0 chr18 29499019 29499355 -57178193 - L1MA6 LINE L1 0 6300 5942 189 167 0 0 chr18 29499925 29499961 -57177587 + L2 LINE L2 3277 3312 -1 207 0 0 0 chr18 29499979 29500002 -57177546 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5818 50 7 0 chr18 29500002 29500726 -57176822 - L1PA7 LINE L1 -11 6143 5415 255 263 0 26 chr18 29501915 29501991 -57175557 - MLT1K LTR MaLR -49 539 466 21 0 0 0 chr18 29503661 29503682 -57173866 + AT_rich Low_complexity Low_complexity 1 21 0 234 330 98 51 chr18 29503899 29504114 -57173434 - MIR SINE MIR -32 230 6 410 223 16 75 chr18 29504260 29504448 -57173100 + MER104 DNA Tc2 4 180 0 332 244 92 23 chr18 29505154 29505285 -57172263 + MIR SINE MIR 123 262 0 651 309 76 13 chr18 29505549 29505785 -57171763 + MIR SINE MIR 9 259 -3 206 371 73 0 chr18 29505822 29505973 -57171575 + MIR SINE MIR 89 250 -12 1835 106 0 8 chr18 29507430 29507676 -57169872 + AluSx SINE Alu 59 302 -10 17532 67 5 0 chr18 29508820 29511934 -57165614 - L1PA6 LINE L1 -1 6153 3026 7631 26 2 2 chr18 29511937 29513186 -57164362 - L1PA3 LINE L1 -3 6152 4904 11990 93 7 3 chr18 29513186 29514985 -57162563 - L1PA6 LINE L1 -3114 3032 1227 4881 172 28 2 chr18 29515035 29515969 -57161579 - L1PA6 LINE L1 -5184 962 5 1595 174 76 22 chr18 29517022 29517378 -57160170 + THE1C LTR MaLR 1 375 0 1729 36 0 32 chr18 29517459 29517679 -57159869 + L1PA3 LINE L1 5940 6152 -3 22 0 0 0 chr18 29518923 29518945 -57158603 + AT_rich Low_complexity Low_complexity 1 22 0 276 149 0 0 chr18 29519072 29519119 -57158429 + (TG)n Simple_repeat Simple_repeat 2 48 0 25 0 0 0 chr18 29519119 29519144 -57158404 + AT_rich Low_complexity Low_complexity 1 25 0 2237 223 65 27 chr18 29519276 29520272 -57157276 + L1ME1 LINE L1 5083 6120 -46 450 255 13 7 chr18 29520173 29520322 -57157226 + L1MA10 LINE L1 6181 6330 -4 * 9180 94 19 7 chr18 29520331 29521603 -57155945 - HSMAR1 DNA Mariner 0 1287 1 31 44 0 0 chr18 29521659 29521704 -57155844 + AT_rich Low_complexity Low_complexity 1 45 0 1891 129 46 20 chr18 29521941 29522058 -57155490 + AluSg SINE Alu 1 113 -197 180 0 0 0 chr18 29522058 29522078 -57155470 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1891 129 46 20 chr18 29522078 29522262 -57155286 + AluSg SINE Alu 113 310 0 23 68 0 0 chr18 29522365 29522409 -57155139 + AT_rich Low_complexity Low_complexity 1 44 0 273 163 0 0 chr18 29522532 29522581 -57154967 + CT-rich Low_complexity Low_complexity 2 50 0 296 294 255 0 chr18 29523181 29523334 -57154214 + MIR SINE MIR 71 262 0 21 0 0 0 chr18 29523982 29524003 -57153545 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr18 29524172 29524210 -57153338 + AT_rich Low_complexity Low_complexity 1 38 0 190 412 8 0 chr18 29524912 29525043 -57152505 - L2 LINE L2 -707 2607 2476 290 337 0 0 chr18 29525045 29525134 -57152414 - L2 LINE L2 -982 2332 2244 328 253 167 49 chr18 29525255 29525424 -57152124 + MIR SINE MIR 28 220 -42 2243 146 46 38 chr18 29525424 29525877 -57151671 - MSTB2 LTR MaLR 0 457 1 328 253 167 49 chr18 29525877 29525909 -57151639 + MIR SINE MIR 220 247 -15 37 23 0 0 chr18 29525949 29525993 -57151555 + AT_rich Low_complexity Low_complexity 1 44 0 800 172 218 64 chr18 29526077 29526403 -57151145 + LTR37A LTR ERV1 51 426 0 2306 101 0 0 chr18 29526604 29526910 -57150638 - AluSg SINE Alu -4 306 1 308 255 32 0 chr18 29526994 29527088 -57150460 + MER103 DNA DNA 11 107 -59 378 61 0 0 chr18 29527088 29527137 -57150411 + (CA)n Simple_repeat Simple_repeat 2 50 0 40375 38 24 1 chr18 29527285 29533282 -57144266 + L1PA3 LINE L1 2 6139 -16 226 0 0 0 chr18 29533282 29533307 -57144241 + (TAA)n Simple_repeat Simple_repeat 3 180 0 40375 38 24 1 chr18 29533307 29533325 -57144223 + L1PA3 LINE L1 6139 6155 0 297 0 0 0 chr18 29533946 29533979 -57143569 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1306 183 15 30 chr18 29533979 29534242 -57143306 - AluJo SINE Alu -51 261 3 2902 13 0 0 chr18 29534769 29535087 -57142461 - AluYb8 SINE Alu 0 318 1 1501 180 10 21 chr18 29535179 29535468 -57142080 + AluJo SINE Alu 1 286 -26 4571 136 80 34 chr18 29535501 29536312 -57141236 - MER49 LTR ERV1 0 923 67 432 0 0 0 chr18 29536312 29536360 -57141188 + (TG)n Simple_repeat Simple_repeat 2 49 0 4571 136 80 34 chr18 29536360 29536429 -57141119 - MER49 LTR ERV1 -856 67 3 1063 315 74 32 chr18 29536896 29537394 -57140154 + LTR33 LTR ERVL 1 519 -2 201 200 20 0 chr18 29537614 29537664 -57139884 + (TAA)n Simple_repeat Simple_repeat 3 53 0 22 0 0 0 chr18 29538385 29538407 -57139141 + AT_rich Low_complexity Low_complexity 1 22 0 2105 146 120 8 chr18 29539871 29540254 -57137294 + MSTA LTR MaLR 1 426 -2 1720 184 0 0 chr18 29540255 29540532 -57137016 - AluJb SINE Alu -33 279 3 3572 104 35 0 chr18 29540585 29541122 -57136426 - L1PA8A LINE L1 -2 6129 5574 2914 98 8 0 chr18 29541122 29541716 -57135832 + L1PA8A LINE L1 4960 5556 -575 23 0 0 0 chr18 29542397 29542420 -57135128 + AT_rich Low_complexity Low_complexity 1 23 0 434 282 51 32 chr18 29542636 29542792 -57134756 - MIR SINE MIR -93 169 11 217 314 211 41 chr18 29544409 29545017 -57132531 - L2 LINE L2 -1051 2263 1553 756 314 59 57 chr18 29545108 29545550 -57131998 + L2 LINE L2 2233 2675 -639 294 368 44 54 chr18 29545786 29546082 -57131466 + L2 LINE L2 2980 3272 0 1758 177 0 7 chr18 29546372 29546655 -57130893 + L1M2 LINE L1 1 281 -6568 * 3095 143 34 4 chr18 29546653 29547211 -57130337 + L1MA4A LINE L1 5254 5828 -475 1620 48 5 5 chr18 29547211 29547416 -57130132 + L1PA7 LINE L1 5940 6147 -7 2902 102 20 35 chr18 29547445 29547936 -57129612 + L1MA4A LINE L1 5814 6297 -6 2506 64 0 6 chr18 29549691 29550003 -57127545 - AluY SINE Alu -1 310 1 504 235 68 0 chr18 29551090 29551222 -57126326 + MER103 DNA DNA 9 149 -17 6231 106 11 0 chr18 29551248 29552278 -57125270 - L1PA10 LINE L1 -2 6166 5128 23 78 0 0 chr18 29553051 29553102 -57124446 + AT_rich Low_complexity Low_complexity 1 51 0 768 289 109 53 chr18 29554792 29555169 -57122379 + MLT1J LTR MaLR 110 507 -4 388 215 18 11 chr18 29556814 29556943 -57120605 + MER5A DNA MER1_type 4 189 0 5860 201 74 16 chr18 29557556 29558772 -57118776 - L1 LINE L1 -958 5188 3867 1032 71 7 0 chr18 29558772 29558912 -57118636 - L1PB1 LINE L1 0 6151 6011 5860 201 74 16 chr18 29558912 29559188 -57118360 - L1 LINE L1 -2279 3867 3609 5195 141 40 50 chr18 29559287 29559394 -57118154 + L1MA9 LINE L1 5188 5295 -1017 207 0 0 0 chr18 29559394 29559417 -57118131 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 5195 141 40 50 chr18 29559417 29559743 -57117805 + L1MA9 LINE L1 5295 5623 -689 1806 165 7 3 chr18 29559743 29560040 -57117508 + AluSx SINE Alu 1 298 -14 5195 141 40 50 chr18 29560040 29560240 -57117308 + L1MA9 LINE L1 5623 5824 -488 303 28 0 0 chr18 29560240 29560276 -57117272 + (CA)n Simple_repeat Simple_repeat 2 37 0 5195 141 40 50 chr18 29560276 29560774 -57116774 + L1MA9 LINE L1 5824 6312 0 2146 112 6 10 chr18 29560893 29561206 -57116342 - AluSq SINE Alu -1 312 1 357 289 114 49 chr18 29561343 29561606 -57115942 - HAL1 LINE L1 -2 2505 2226 1633 165 0 15 chr18 29561773 29562045 -57115503 - AluJo SINE Alu -10 302 35 1835 124 6 48 chr18 29562344 29562658 -57114890 - AluSx SINE Alu 0 312 12 795 283 127 44 chr18 29562949 29563515 -57114033 - HAL1 LINE L1 -697 1810 1198 1470 246 98 42 chr18 29563540 29564159 -57113389 + MLT1E1 LTR MaLR 1 654 0 286 261 96 47 chr18 29564159 29564481 -57113067 - HAL1 LINE L1 -1344 1163 826 280 286 0 0 chr18 29564898 29564961 -57112587 + polypyrimidine Low_complexity Low_complexity 4 66 0 2931 134 11 35 chr18 29565121 29565166 -57112382 - L1MA9 LINE L1 0 6312 6267 1897 146 20 3 chr18 29565166 29565468 -57112080 - AluSx SINE Alu -5 307 1 2931 134 11 35 chr18 29565468 29565569 -57111979 - L1MA9 LINE L1 -45 6267 6165 2302 138 22 0 chr18 29565569 29565925 -57111623 + THE1B LTR MaLR 1 364 0 2931 134 11 35 chr18 29565925 29566315 -57111233 - L1MA9 LINE L1 -147 6165 5788 259 189 14 14 chr18 29566344 29566418 -57111130 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 0 0 0 chr18 29566422 29566443 -57111105 + AT_rich Low_complexity Low_complexity 1 21 0 237 178 0 0 chr18 29566471 29566516 -57111032 - L1MC4 LINE L1 -1340 6702 6658 21 0 0 0 chr18 29566539 29566560 -57110988 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr18 29566571 29566606 -57110942 + (TG)n Simple_repeat Simple_repeat 2 36 0 2427 145 17 68 chr18 29566606 29567075 -57110473 - Tigger2 DNA MER2_type -1 2717 2273 246 254 15 15 chr18 29567065 29567132 -57110416 - Tigger2 DNA MER2_type -2650 68 2 * 648 251 17 6 chr18 29567400 29567575 -57109973 + MLT1K LTR MaLR 405 581 -7 8173 166 152 12 chr18 29568171 29569717 -57107831 + L1PA15-16 LINE L1 2 1763 -5086 1922 146 10 7 chr18 29570332 29570640 -57106908 - Tigger3b DNA MER2_type 0 1231 923 1970 167 46 31 chr18 29570640 29571194 -57106354 + MLT2A2 LTR ERVL 1 554 0 4938 142 41 12 chr18 29571196 29572095 -57105453 - Tigger3b DNA MER2_type -306 925 1 2417 54 0 35 chr18 29572284 29572598 -57104950 - AluY SINE Alu -8 303 1 2303 56 0 0 chr18 29573301 29573587 -57103961 + L1PA7 LINE L1 5861 6146 -8 24 0 0 0 chr18 29573587 29573611 -57103937 + AT_rich Low_complexity Low_complexity 1 24 0 26 88 0 0 chr18 29574436 29574504 -57103044 + AT_rich Low_complexity Low_complexity 1 68 0 1455 200 77 6 chr18 29575507 29575832 -57101716 - MER7A DNA MER2_type 0 346 1 264 333 0 0 chr18 29576138 29576234 -57101314 + L1M4c LINE L1 1470 1565 -4819 908 279 19 24 chr18 29576356 29576768 -57100780 + L1M4c LINE L1 2127 2536 -4027 1691 254 87 35 chr18 29576769 29577333 -57100215 + MLT1E LTR MaLR 1 593 0 2237 195 33 18 chr18 29577355 29577806 -57099742 - MLT1C LTR MaLR 0 467 10 1267 246 37 9 chr18 29577817 29578272 -57099276 + MLT1E-int LTR MaLR 21 605 -766 232 316 131 24 chr18 29578317 29578485 -57099063 + MLT1K LTR MaLR 283 468 -120 2152 120 0 19 chr18 29579746 29580054 -57097494 + AluSp SINE Alu 1 302 -11 13112 32 1 0 chr18 29580743 29583083 -57094465 - L1PA4 LINE L1 0 6155 3808 5123 48 5 7 chr18 29583083 29583755 -57093793 + L1PA4 LINE L1 3138 3807 -2339 * 13482 130 38 117 chr18 29583742 29586813 -57090735 - L1P LINE L1 -3305 2841 12 274 354 0 0 chr18 29586827 29586909 -57090639 - L2 LINE L2 -43 3270 3189 328 295 122 7 chr18 29587240 29587379 -57090169 - MIR SINE MIR -61 201 47 5141 212 26 7 chr18 29587542 29589404 -57088144 + L1MC1 LINE L1 4419 6315 -18 4987 215 18 57 chr18 29589731 29589957 -57087591 + L1PB4 LINE L1 2036 2269 -3877 297 0 0 0 chr18 29589957 29589990 -57087558 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 6971 157 15 43 chr18 29589998 29592200 -57085348 - L1PA12 LINE L1 -11 6157 3990 4987 215 18 57 chr18 29592200 29593136 -57084412 + L1PB4 LINE L1 2276 3104 -3042 1863 87 7 63 chr18 29593136 29593422 -57084126 + AluY SINE Alu 41 310 -1 4987 215 18 57 chr18 29593422 29593890 -57083658 + L1PB4 LINE L1 3104 3589 -2557 * 5039 78 8 8 chr18 29593889 29594552 -57082996 + THE1B-int LTR MaLR 917 1579 -1 2146 128 72 17 chr18 29594553 29594898 -57082650 + THE1B LTR MaLR 1 364 0 4131 176 22 50 chr18 29594898 29595469 -57082079 + L1PB4 LINE L1 4817 5403 -753 8276 185 22 5 chr18 29595469 29597843 -57079705 + L1PA13 LINE L1 3763 6157 -6 4131 176 22 50 chr18 29597843 29598235 -57079313 + L1PB4 LINE L1 5403 5734 -422 336 24 0 0 chr18 29598235 29598276 -57079272 + (TG)n Simple_repeat Simple_repeat 2 42 0 4131 176 22 50 chr18 29598276 29598682 -57078866 + L1PB4 LINE L1 5734 6150 -6 24 67 0 0 chr18 29598713 29598758 -57078790 + AT_rich Low_complexity Low_complexity 1 45 0 328 388 29 12 chr18 29599118 29599288 -57078260 - MIR SINE MIR -62 200 28 386 36 36 0 chr18 29600216 29600271 -57077277 + (CATATA)n Simple_repeat Simple_repeat 5 61 0 299 352 74 0 chr18 29600545 29600653 -57076895 + L2 LINE L2 3147 3262 -10 610 279 50 25 chr18 29600783 29600984 -57076564 + MIR SINE MIR 20 225 -37 237 220 0 0 chr18 29601576 29601626 -57075922 + MLT1J LTR MaLR 3 52 -459 238 250 56 9 chr18 29601700 29601808 -57075740 + MLT1J LTR MaLR 79 191 -320 343 209 45 82 chr18 29602634 29602690 -57074858 - MLT1J1 LTR MaLR 0 446 389 2824 170 75 72 chr18 29602690 29603332 -57074216 + MER73 LTR ERVL 1 644 0 343 209 45 82 chr18 29603332 29603409 -57074139 - MLT1J1 LTR MaLR -57 389 318 467 236 23 132 chr18 29603436 29603694 -57073854 + MIR SINE MIR 32 261 -1 385 311 60 76 chr18 29604100 29604415 -57073133 - L2 LINE L2 -5 3308 2999 1945 185 11 17 chr18 29604417 29604774 -57072774 + MLT1A1 LTR MaLR 3 357 -8 233 328 0 0 chr18 29604813 29604880 -57072668 - L2 LINE L2 -337 2977 2911 191 176 0 0 chr18 29604879 29604913 -57072635 + MIR SINE MIR 159 192 -70 * 927 287 88 9 chr18 29604935 29605276 -57072272 + LTR16A LTR ERVL 3 370 -80 250 322 63 23 chr18 29605387 29605561 -57071987 + MIR SINE MIR 49 229 -33 2380 264 103 22 chr18 29605666 29606293 -57071255 - L1ME3A LINE L1 0 6564 5989 198 0 0 0 chr18 29606293 29606315 -57071233 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 2286 107 7 0 chr18 29606325 29606633 -57070915 + AluSx SINE Alu 1 310 -2 2380 264 103 22 chr18 29606633 29608144 -57069404 - L1ME3A LINE L1 -583 5981 4235 1239 272 69 36 chr18 29608390 29609158 -57068390 - L1ME3A LINE L1 -3175 3365 2573 423 271 94 62 chr18 29609191 29609435 -57068113 - L1ME3A LINE L1 -4117 2604 2353 316 254 112 78 chr18 29609811 29610385 -57067163 - L1MDa LINE L1 -4763 1958 1327 182 308 82 63 chr18 29610693 29610852 -57066696 - L2 LINE L2 -15 3298 3137 238 436 43 6 chr18 29611740 29611903 -57065645 - L2 LINE L2 0 3272 3104 302 301 70 50 chr18 29612249 29612448 -57065100 - MLT1L LTR MaLR -290 325 123 27 0 0 0 chr18 29613096 29613123 -57064425 + AT_rich Low_complexity Low_complexity 1 27 0 1372 226 85 42 chr18 29613745 29614192 -57063356 + MER21B LTR ERV1 387 852 -11 2236 98 0 7 chr18 29615353 29615648 -57061900 - AluSx SINE Alu -19 293 1 882 130 48 0 chr18 29616578 29616724 -57060824 - L1MC1 LINE L1 -146 6187 6035 4539 149 22 5 chr18 29616908 29617666 -57059882 - L1MC1 LINE L1 -27 6306 5536 1803 262 65 5 chr18 29617738 29618356 -57059192 - L1M4 LINE L1 -1395 4751 4097 733 266 86 23 chr18 29618903 29619207 -57058341 + Charlie2 DNA MER1_type 8 330 -2532 * 1971 208 177 22 chr18 29619198 29619453 -57058095 + Charlie2 DNA MER1_type 1856 2070 -792 2761 116 14 2 chr18 29619453 29619876 -57057672 - MER57B LTR ERV1 -4 430 3 1971 208 177 22 chr18 29619876 29620486 -57057062 + Charlie2 DNA MER1_type 2070 2855 -7 30 27 0 0 chr18 29620530 29620567 -57056981 + AT_rich Low_complexity Low_complexity 1 37 0 1835 196 27 0 chr18 29620761 29620798 -57056750 + L1 LINE L1 4364 4399 -1747 207 0 0 0 chr18 29620798 29620821 -57056727 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1835 196 27 0 chr18 29620821 29621196 -57056352 + L1 LINE L1 4399 4787 -1359 355 273 207 47 chr18 29621196 29621471 -57056077 - L3 LINE CR1 -730 847 529 1754 161 21 7 chr18 29621843 29622128 -57055420 - AluJo SINE Alu -19 293 5 228 221 65 13 chr18 29623511 29623588 -57053960 + MLT1L LTR MaLR 517 597 -18 342 0 0 0 chr18 29624185 29624223 -57053325 + (CA)n Simple_repeat Simple_repeat 2 39 0 6040 104 20 7 chr18 29624251 29625599 -57051949 - L1PA11 LINE L1 0 6174 4808 337 323 53 53 chr18 29625623 29625960 -57051588 + L1ME LINE L1 5483 5819 -302 4055 150 28 11 chr18 29626087 29626809 -57050739 - L1MC3 LINE L1 -166 7619 6886 7689 184 28 21 chr18 29626812 29628203 -57049345 - L1PA16 LINE L1 -1 6165 4746 1617 98 27 0 chr18 29628203 29628427 -57049121 - MER30 DNA MER1_type 0 230 1 7689 184 28 21 chr18 29628427 29629664 -57047884 - L1PA16 LINE L1 -1420 4746 3520 180 0 0 0 chr18 29630998 29631018 -57046530 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1540 209 24 30 chr18 29631198 29631571 -57045977 + MLT1A2 LTR MaLR 2 372 -2 964 258 50 53 chr18 29631616 29632139 -57045409 + LTR33 LTR ERVL 1 521 0 255 308 10 19 chr18 29633535 29633639 -57043909 - L2 LINE L2 -590 2724 2622 1974 150 134 8 chr18 29633666 29634046 -57043502 - MSTA LTR MaLR 0 428 1 279 0 0 0 chr18 29634731 29634762 -57042786 + (CAAT)n Simple_repeat Simple_repeat 3 33 0 226 266 122 36 chr18 29634894 29635033 -57042515 - MIR SINE MIR -16 246 96 21 36 0 0 chr18 29636239 29636267 -57041281 + AT_rich Low_complexity Low_complexity 1 28 0 2267 61 0 3 chr18 29638822 29639116 -57038432 + L1PA4 LINE L1 5861 6153 -2 3339 102 10 23 chr18 29639721 29640200 -57037348 - MER1A DNA MER1_type 0 529 57 246 216 232 24 chr18 29640316 29640441 -57037107 + MER5A DNA MER1_type 37 187 -2 * 470 192 20 10 chr18 29640346 29640445 -57037103 - MER5A DNA MER1_type -77 112 13 195 325 94 26 chr18 29641256 29641373 -57036175 + MER5A DNA MER1_type 20 144 -45 868 204 17 0 chr18 29643114 29643290 -57034258 - MER3 DNA MER1_type -30 179 1 237 33 0 0 chr18 29643836 29643866 -57033682 + (A)n Simple_repeat Simple_repeat 1 30 0 913 193 6 0 chr18 29643995 29644166 -57033382 - MER4D LTR ERV1 -10 893 722 569 161 0 0 chr18 29644167 29644260 -57033288 + AluJ/FLAM SINE Alu 1 93 -219 641 186 0 0 chr18 29644266 29644384 -57033164 + AluSg/x SINE Alu 192 309 -1 2131 170 32 101 chr18 29644384 29645007 -57032541 - MER4D LTR ERV1 -163 616 62 1200 179 107 27 chr18 29645000 29645087 -57032461 - MER49 LTR ERV1 -639 284 205 * 1510 242 47 86 chr18 29645087 29645724 -57031824 - LTR9 LTR ERV1 0 612 1 1200 179 107 27 chr18 29645724 29645899 -57031649 - MER49 LTR ERV1 -718 205 1 2984 168 29 78 chr18 29646409 29646600 -57030948 + LTR8 LTR ERV1 1 200 -491 258 32 0 0 chr18 29646600 29646631 -57030917 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2984 168 29 78 chr18 29646631 29647166 -57030382 + LTR8 LTR ERV1 200 691 0 2589 181 48 22 chr18 29647180 29647760 -57029788 + LTR49 LTR ERV1 1 595 0 22 0 0 0 chr18 29649083 29649105 -57028443 + AT_rich Low_complexity Low_complexity 1 22 0 269 224 144 0 chr18 29649468 29649593 -57027955 + L1MC/D LINE L1 3106 3248 -2898 314 255 107 29 chr18 29649878 29650205 -57027343 + L1MC/D LINE L1 5122 5475 -757 225 241 19 9 chr18 29650360 29650468 -57027080 + (TA)n Simple_repeat Simple_repeat 1 109 0 325 314 0 0 chr18 29651056 29651161 -57026387 - L1ME LINE L1 -508 5613 5509 23 0 0 0 chr18 29651218 29651241 -57026307 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr18 29651415 29651454 -57026094 + AT_rich Low_complexity Low_complexity 1 39 0 287 335 46 9 chr18 29651464 29651682 -57025866 - L1MC4 LINE L1 -55 7987 7762 534 361 121 0 chr18 29651708 29652021 -57025527 + LTR33 LTR ERVL 18 368 -153 255 61 0 0 chr18 29652208 29652241 -57025307 + (TA)n Simple_repeat Simple_repeat 1 33 0 2149 118 0 20 chr18 29652241 29652540 -57025008 - AluSx SINE Alu -17 295 3 2145 128 7 0 chr18 29652711 29653016 -57024532 - AluSx SINE Alu -5 307 1 23 0 0 0 chr18 29653330 29653353 -57024195 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 29653444 29653465 -57024083 + AT_rich Low_complexity Low_complexity 1 21 0 885 171 29 120 chr18 29653510 29653785 -57023763 + MLT1F1 LTR MaLR 3 252 -315 353 338 25 20 chr18 29654033 29654234 -57023314 + HERV16 LTR ERVL 4494 4695 -301 717 335 19 25 chr18 29654592 29654959 -57022589 + LTR16B LTR ERVL 47 411 -53 858 227 92 5 chr18 29655150 29655335 -57022213 - MER58A DNA MER1_type -4 220 20 260 320 95 31 chr18 29655454 29655938 -57021610 - HAL1b LINE L1 -498 850 336 2561 149 35 7 chr18 29656304 29656732 -57020816 + MER83 LTR ERV1 1 440 -8 1055 244 121 16 chr18 29657759 29658066 -57019482 + LTR16B LTR ERVL 1 339 -125 2106 120 13 3 chr18 29659700 29660009 -57017539 - AluSq SINE Alu -1 312 1 22 0 0 0 chr18 29660286 29660308 -57017240 + AT_rich Low_complexity Low_complexity 1 22 0 2223 101 3 3 chr18 29662377 29662674 -57014874 - AluSg1 SINE Alu -12 297 1 728 326 175 27 chr18 29662819 29663441 -57014107 + L3 LINE CR1 270 983 -594 482 283 100 22 chr18 29663687 29663867 -57013681 - MIR SINE MIR -63 199 6 299 279 94 64 chr18 29664093 29664390 -57013158 + L2 LINE L2 3008 3313 0 687 312 61 8 chr18 29664908 29665155 -57012393 + MIR SINE MIR 2 261 -1 292 267 35 35 chr18 29665257 29665343 -57012205 + MIR SINE MIR 63 148 -114 211 356 9 26 chr18 29666416 29666531 -57011017 - L3 LINE CR1 -623 954 842 348 64 0 0 chr18 29666728 29666775 -57010773 + (CA)n Simple_repeat Simple_repeat 2 48 0 258 56 0 0 chr18 29668739 29668775 -57008773 + (TG)n Simple_repeat Simple_repeat 2 37 0 23 0 0 0 chr18 29668975 29668998 -57008550 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr18 29669038 29669073 -57008475 + AT_rich Low_complexity Low_complexity 1 35 0 1997 334 78 30 chr18 29671098 29672369 -57005179 + L2 LINE L2 79 1410 -1904 762 296 34 13 chr18 29672573 29672806 -57004742 + LTR16A LTR ERVL 207 444 -6 643 273 38 49 chr18 29672812 29673076 -57004472 + HERV16 LTR ERVL 1 261 -4735 279 359 46 10 chr18 29673171 29673366 -57004182 + HERV16 LTR ERVL 1248 1449 -3547 434 306 27 27 chr18 29673412 29673559 -57003989 + L2 LINE L2 3163 3309 -4 12926 167 25 19 chr18 29674264 29674848 -57002700 + L1M4c LINE L1 2 581 -5801 1889 119 4 0 chr18 29674848 29675101 -57002447 + AluSx SINE Alu 14 267 -45 12926 167 25 19 chr18 29675101 29677072 -57000476 + L1M4c LINE L1 581 2573 -3809 4329 238 42 45 chr18 29677075 29677134 -57000414 + L1M4c LINE L1 2734 2792 -3590 2009 104 82 25 chr18 29677134 29677489 -57000059 + THE1C LTR MaLR 1 375 0 4329 238 42 45 chr18 29677489 29678253 -56999295 + L1M4c LINE L1 2792 3557 -2825 2005 162 103 3 chr18 29678253 29678642 -56998906 + MSTA LTR MaLR 1 428 0 4329 238 42 45 chr18 29678642 29679169 -56998379 + L1M4c LINE L1 3557 4082 -2300 1889 190 40 107 chr18 29679169 29679700 -56997848 + LTR42 LTR ERVL 1 495 0 4329 238 42 45 chr18 29679700 29679937 -56997611 + L1M4c LINE L1 4082 4318 -2064 6673 229 52 38 chr18 29680038 29681372 -56996176 - L1PA15-16 LINE L1 -3718 3131 1818 194 61 0 30 chr18 29681372 29681405 -56996143 + (TTA)n Simple_repeat Simple_repeat 2 33 0 6673 229 52 38 chr18 29681405 29683602 -56993946 - L1PA15-16 LINE L1 -5031 1818 1 312 341 72 0 chr18 29683696 29683834 -56993714 + L1ME4a LINE L1 5947 6094 -27 2252 184 21 28 chr18 29684281 29684706 -56992842 - MSTB LTR MaLR 0 426 5 32 26 0 0 chr18 29684762 29684801 -56992747 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr18 29684813 29684834 -56992714 + AT_rich Low_complexity Low_complexity 1 21 0 322 218 13 0 chr18 29685406 29685484 -56992064 + MER116 DNA Mariner 2 80 0 1057 80 0 0 chr18 29686089 29686226 -56991322 + AluSp/q SINE Alu 167 303 -10 553 108 16 43 chr18 29686226 29686411 -56991137 + (TA)n Simple_repeat Simple_repeat 1 180 0 972 192 47 23 chr18 29686893 29687107 -56990441 - MER20 DNA MER1_type 0 219 1 26 0 0 0 chr18 29687404 29687430 -56990118 + AT_rich Low_complexity Low_complexity 1 26 0 23 0 0 0 chr18 29687511 29687534 -56990014 + AT_rich Low_complexity Low_complexity 1 23 0 230 114 0 23 chr18 29687736 29687780 -56989768 + (TATATG)n Simple_repeat Simple_repeat 2 44 0 2510 36 30 0 chr18 29688466 29688768 -56988780 - AluY SINE Alu 0 311 1 339 237 66 157 chr18 29688979 29689253 -56988295 - MLT1K LTR MaLR 0 588 340 264 272 60 82 chr18 29689297 29689481 -56988067 - LTR67 LTR ERVL 0 557 378 1356 228 15 133 chr18 29689744 29690082 -56987466 + AluY SINE Alu 1 298 -3 27 0 0 0 chr18 29690082 29690109 -56987439 + AT_rich Low_complexity Low_complexity 1 27 0 400 316 36 5 chr18 29690655 29690851 -56986697 - ERVL LTR ERVL -1075 4689 4488 1775 205 74 37 chr18 29691329 29691816 -56985732 - MLT1D LTR MaLR 0 505 1 661 338 64 4 chr18 29692004 29692238 -56985310 - MIR SINE MIR -3 259 12 682 323 91 38 chr18 29692302 29692729 -56984819 - LTR16A LTR ERVL 0 450 1 476 312 12 17 chr18 29692743 29692916 -56984632 + MER5B DNA MER1_type 4 175 -3 1642 237 82 35 chr18 29695166 29695677 -56981871 - MER90 LTR ERV1 -12 563 29 31 44 0 0 chr18 29696129 29696174 -56981374 + AT_rich Low_complexity Low_complexity 1 45 0 192 392 100 45 chr18 29696371 29696662 -56980886 + L2 LINE L2 2961 3267 -5 709 308 44 0 chr18 29696825 29697052 -56980496 - MIR SINE MIR -1 261 25 958 174 82 46 chr18 29698769 29698964 -56978584 + AluJb SINE Alu 84 285 -27 1123 282 68 22 chr18 29699242 29699657 -56977891 - LTR16A LTR ERVL 0 450 17 424 275 152 41 chr18 29699786 29700055 -56977493 + HAL1 LINE L1 1048 1346 -1161 1924 112 45 0 chr18 29700991 29701277 -56976271 - AluSq SINE Alu -14 299 1 21 36 0 0 chr18 29701554 29701582 -56975966 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr18 29701885 29701917 -56975631 + AT_rich Low_complexity Low_complexity 1 32 0 1831 256 65 18 chr18 29701943 29702451 -56975097 + MLT1F LTR MaLR 6 537 -5 2240 138 32 3 chr18 29702630 29703001 -56974547 - MSTA LTR MaLR -46 382 1 323 263 15 102 chr18 29704348 29704553 -56972995 + L1MC5 LINE L1 7536 7722 -239 805 153 47 0 chr18 29704566 29704736 -56972812 - L1MA9 LINE L1 -38 6274 6097 716 250 73 5 chr18 29704948 29705140 -56972408 - MER70A LTR ERVL -264 208 4 340 158 0 0 chr18 29705147 29705204 -56972344 - L1MA9 LINE L1 -206 6106 6050 1700 226 22 8 chr18 29705235 29705677 -56971871 + MLT2B1 LTR ERVL 1 520 0 871 265 40 102 chr18 29706080 29706658 -56970890 + MER34 LTR ERV1 1 542 0 2229 101 7 0 chr18 29706836 29707142 -56970406 + AluY SINE Alu 1 308 -3 483 333 33 22 chr18 29707813 29707993 -56969555 - MLT1J LTR MaLR -239 272 91 857 238 133 80 chr18 29708694 29709094 -56968454 - MER110 LTR ERV1 -24 467 47 3293 207 47 70 chr18 29709396 29709738 -56967810 + L1M3 LINE L1 4133 4481 -1702 2036 133 0 59 chr18 29709738 29710061 -56967487 + AluSc SINE Alu 3 306 -3 3293 207 47 70 chr18 29710061 29711443 -56966105 + L1M3 LINE L1 4481 5822 -361 324 327 52 24 chr18 29711453 29711752 -56965796 + L1PA13 LINE L1 7 1051 -6534 16728 188 25 36 chr18 29712971 29715251 -56962297 + L1PA13 LINE L1 2319 4623 -2978 1043 33 0 0 chr18 29715251 29715372 -56962176 + AluY SINE Alu 176 296 -15 16728 188 25 36 chr18 29715372 29718316 -56959232 + L1PA13 LINE L1 4623 7594 -7 1720 145 38 46 chr18 29718320 29718693 -56958855 + L1MB3 LINE L1 5812 6181 -2 1584 171 0 4 chr18 29718999 29719257 -56958291 + AluJb SINE Alu 3 259 -53 3901 57 0 18 chr18 29719336 29719841 -56957707 + L1PA7 LINE L1 5653 6148 -6 21 0 0 0 chr18 29720558 29720579 -56956969 + AT_rich Low_complexity Low_complexity 1 21 0 1689 113 52 0 chr18 29722579 29722746 -56954802 - AluY SINE Alu -10 301 115 402 21 0 0 chr18 29722746 29722793 -56954755 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1689 113 52 0 chr18 29722793 29722873 -56954675 - AluY SINE Alu -196 115 41 198 303 183 49 chr18 29723186 29723328 -56954220 - L2 LINE L2 -40 3232 3072 740 275 101 39 chr18 29724459 29724844 -56952704 - MLT1I LTR MaLR 0 409 1 584 284 102 4 chr18 29725095 29725454 -56952094 - MLT1J LTR MaLR -31 480 43 2029 126 34 0 chr18 29726535 29726852 -56950696 + AluSx SINE Alu 1 312 0 2301 274 280 42 chr18 29728380 29730539 -56947009 + L2 LINE L2 638 3313 0 2197 105 7 0 chr18 29730640 29730934 -56946614 - AluSp SINE Alu -17 296 1 180 367 71 10 chr18 29731191 29731289 -56946259 - MIR3 SINE MIR -97 111 8 492 301 38 16 chr18 29732773 29732956 -56944592 - MIR SINE MIR 0 262 76 270 322 22 11 chr18 29733000 29733090 -56944458 - MIR SINE MIR -143 119 29 426 332 69 47 chr18 29733251 29733615 -56943933 - MLT1H LTR MaLR -55 494 123 180 0 0 0 chr18 29733685 29733705 -56943843 + (T)n Simple_repeat Simple_repeat 1 20 0 934 280 21 25 chr18 29734818 29735097 -56942451 + MER97c DNA MER1_type? 2 279 -811 321 203 81 0 chr18 29735111 29735185 -56942363 - MLT2B2 LTR ERVL -9 506 427 228 312 60 43 chr18 29735193 29735475 -56942073 + L1M4 LINE L1 4561 4847 -1299 262 319 129 32 chr18 29735740 29735988 -56941560 + LTR16C LTR ERVL 210 481 -10 615 213 40 0 chr18 29737276 29737426 -56940122 - L1MD2 LINE L1 -1 6752 6597 1466 205 34 65 chr18 29737429 29737907 -56939641 - L1MD2 LINE L1 -218 6535 6073 26 0 0 0 chr18 29737907 29737933 -56939615 + AT_rich Low_complexity Low_complexity 1 26 0 40799 32 21 1 chr18 29737933 29743950 -56933598 - L1PA2 LINE L1 -5 6150 8 10091 253 52 21 chr18 29743958 29745972 -56931576 - L1MD2 LINE L1 -668 6085 4134 2591 94 3 22 chr18 29745972 29746334 -56931214 + THE1A LTR MaLR 1 355 0 11022 107 9 8 chr18 29746334 29747911 -56929637 + THE1A-int LTR MaLR 1 1580 0 2531 102 8 0 chr18 29747911 29748263 -56929285 + THE1A LTR MaLR 1 355 0 10091 253 52 21 chr18 29748263 29751943 -56925605 - L1MD2 LINE L1 -2618 4135 42 251 379 8 32 chr18 29803359 29803483 -56874065 - MER5A DNA MER1_type -51 138 18 2237 175 24 0 chr18 29804075 29804493 -56873055 - MSTA LTR MaLR 0 428 1 1996 135 0 0 chr18 29804862 29805158 -56872390 - AluSx SINE Alu -16 296 1 241 335 136 14 chr18 29805708 29805929 -56871619 - L1ME LINE L1 -537 5627 5380 2020 180 59 5 chr18 29808937 29809343 -56868205 + MSTA LTR MaLR 1 428 0 368 242 126 0 chr18 29809887 29809982 -56867566 - MER58B DNA MER1_type -3 338 232 2556 108 8 0 chr18 29810959 29811320 -56866228 + THE1B LTR MaLR 1 364 0 6239 89 20 7 chr18 29811680 29812563 -56864985 + L1PA10 LINE L1 5254 6151 -17 207 0 0 0 chr18 29812563 29812586 -56864962 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 6239 89 20 7 chr18 29812586 29812604 -56864944 + L1PA10 LINE L1 6151 6167 -1 330 316 8 17 chr18 29812902 29813019 -56864529 - MIR SINE MIR -68 140 25 29 0 0 0 chr18 29813623 29813652 -56863896 + AT_rich Low_complexity Low_complexity 1 29 0 367 253 24 0 chr18 29814302 29814385 -56863163 + MER7A DNA MER2_type 1 83 -263 968 175 38 26 chr18 29814387 29814666 -56862882 + LTR1 LTR ERV1 1 187 -598 * 1796 194 116 99 chr18 29814665 29815381 -56862167 + LTR1B LTR ERV1 99 826 0 1409 152 0 25 chr18 29815389 29815633 -56861915 + MER7A DNA MER2_type 99 336 0 409 288 93 0 chr18 29818114 29818253 -56859295 + MIR SINE MIR 63 214 -48 3537 228 66 20 chr18 29818955 29820499 -56857049 - L1MB4 LINE L1 0 6416 4809 2121 239 60 38 chr18 29820501 29821149 -56856399 - L1MB4 LINE L1 -2170 4212 3539 1391 136 32 0 chr18 29821149 29821370 -56856178 + MER30 DNA MER1_type 2 229 -1 2121 239 60 38 chr18 29821370 29821580 -56855968 - L1MB4 LINE L1 -2843 3539 3335 4379 162 34 9 chr18 29821634 29822447 -56855101 - L1MA3 LINE L1 -31 6274 5441 779 223 46 52 chr18 29822445 29822750 -56854798 - L1MB4 LINE L1 -5268 1116 814 * 422 209 19 0 chr18 29822753 29822858 -56854690 + L1ME2 LINE L1 5866 5972 -192 272 279 58 0 chr18 29822975 29823061 -56854487 + MLT1C LTR MaLR 54 144 -361 439 171 43 18 chr18 29823062 29823136 -56854412 + (TA)n Simple_repeat Simple_repeat 1 72 -96 3309 112 49 4 chr18 29823136 29823665 -56853883 + L1PA11 LINE L1 5617 6169 -5 439 171 43 18 chr18 29823665 29823754 -56853794 + (TA)n Simple_repeat Simple_repeat 72 168 0 929 257 33 40 chr18 29823754 29824054 -56853494 + MLT1C LTR MaLR 168 465 -2 1453 171 117 0 chr18 29824085 29824342 -56853206 + AluJb SINE Alu 5 291 -21 371 302 47 68 chr18 29824355 29824590 -56852958 + MLT1I LTR MaLR 180 409 0 22 56 0 0 chr18 29825157 29825193 -56852355 + AT_rich Low_complexity Low_complexity 1 36 0 261 108 108 0 chr18 29825497 29825571 -56851977 + (TTAA)n Simple_repeat Simple_repeat 1 82 0 270 73 0 0 chr18 29825674 29825715 -56851833 + (TATAA)n Simple_repeat Simple_repeat 2 42 0 652 321 58 59 chr18 29825739 29826310 -56851238 - L2 LINE L2 -226 3087 2517 247 184 40 0 chr18 29826563 29826639 -56850909 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 26 30 0 0 chr18 29827037 29827070 -56850478 + AT_rich Low_complexity Low_complexity 1 33 0 5507 131 5 4 chr18 29827388 29828225 -56849323 + L1PA16 LINE L1 5320 6157 -9 836 130 0 0 chr18 29828245 29828368 -56849180 + AluSg/x SINE Alu 174 296 -16 1395 205 47 22 chr18 29828681 29829042 -56848506 - MLT1A2 LTR MaLR 0 374 5 536 72 0 0 chr18 29829516 29829585 -56847963 - THE1C LTR MaLR -306 69 1 221 291 0 0 chr18 29832311 29832366 -56845182 + (CACCAT)n Simple_repeat Simple_repeat 1 55 0 461 158 9 26 chr18 29834088 29834202 -56843346 + T-rich Low_complexity Low_complexity 2 113 0 890 175 6 0 chr18 29834220 29834397 -56843151 + CT-rich Low_complexity Low_complexity 1 178 0 257 284 52 17 chr18 29835145 29835261 -56842287 - L1ME LINE L1 -298 5823 5704 227 361 131 16 chr18 29835314 29835436 -56842112 + MIR SINE MIR 54 189 -73 22 35 0 0 chr18 29836450 29836479 -56841069 + AT_rich Low_complexity Low_complexity 1 29 0 1324 235 157 25 chr18 29836480 29836984 -56840564 - MLT1F1 LTR MaLR 0 567 1 300 111 0 0 chr18 29837114 29837159 -56840389 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 308 310 58 39 chr18 29837614 29837769 -56839779 + L3 LINE CR1 1403 1560 -17 183 261 87 29 chr18 29837921 29837990 -56839558 + MIR SINE MIR 119 191 -71 1636 245 21 13 chr18 29838110 29838494 -56839054 + MER82 DNA MER2_type 267 653 0 581 222 17 0 chr18 29838627 29838744 -56838804 - MER82 DNA MER2_type -527 126 8 21 0 0 0 chr18 29840564 29840585 -56836963 + AT_rich Low_complexity Low_complexity 1 21 0 210 37 0 0 chr18 29840688 29840715 -56836833 + (CA)n Simple_repeat Simple_repeat 2 28 0 270 296 17 9 chr18 29840839 29840954 -56836594 - L1MEc LINE L1 -5453 943 828 1398 212 120 83 chr18 29840960 29841320 -56836228 - MLT1F1 LTR MaLR -2 565 178 2710 16 0 0 chr18 29841320 29841624 -56835924 - AluYb8 SINE Alu -14 304 1 1398 212 120 83 chr18 29841624 29841799 -56835749 - MLT1F1 LTR MaLR -389 178 11 213 267 0 17 chr18 29842127 29842187 -56835361 + (TA)n Simple_repeat Simple_repeat 1 59 0 31 0 0 0 chr18 29843668 29843699 -56833849 + AT_rich Low_complexity Low_complexity 1 31 0 683 241 119 34 chr18 29843830 29844066 -56833482 + MIR SINE MIR 1 256 -6 191 410 16 0 chr18 29845190 29845251 -56832297 + L2 LINE L2 3117 3178 -94 4169 160 11 17 chr18 29845594 29846307 -56831241 + Tigger1 DNA MER2_type 2 710 -1708 3608 116 9 11 chr18 29846307 29846753 -56830795 - Ricksha_b DNA DNA -2083 771 325 1958 156 8 19 chr18 29846753 29847112 -56830436 + THE1A LTR MaLR 1 355 0 3608 116 9 11 chr18 29847112 29847199 -56830349 - Ricksha_b DNA DNA -2529 325 239 471 269 0 0 chr18 29847209 29847328 -56830220 - Ricksha_b DNA DNA -1135 119 1 8154 138 17 6 chr18 29847329 29848629 -56828919 + Tigger1 DNA MER2_type 951 2264 -154 227 339 29 18 chr18 29848648 29848819 -56828729 + L1MC/D LINE L1 5602 5774 -2034 407 52 17 0 chr18 29848996 29849054 -56828494 + (TG)n Simple_repeat Simple_repeat 2 60 0 23 54 0 0 chr18 29849176 29849213 -56828335 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr18 29849270 29849299 -56828249 + AT_rich Low_complexity Low_complexity 1 29 0 304 294 0 40 chr18 29850933 29851059 -56826489 - L1MC4 LINE L1 -1314 6728 6608 26 0 0 0 chr18 29851863 29851889 -56825659 + AT_rich Low_complexity Low_complexity 1 26 0 205 344 53 53 chr18 29852527 29852716 -56824832 - MIR SINE MIR -50 212 24 828 235 93 10 chr18 29852716 29853005 -56824543 - MER33 DNA MER1_type 0 324 12 192 361 82 16 chr18 29853091 29853274 -56824274 + MIR SINE MIR 53 247 -15 2941 94 66 0 chr18 29854030 29854455 -56823093 - MLT2A2 LTR ERVL 0 453 1 239 368 26 13 chr18 29855114 29855269 -56822279 - L1ME LINE L1 -464 5698 5542 2548 34 0 0 chr18 29855279 29855576 -56821972 - AluY SINE Alu -14 297 1 402 357 18 22 chr18 29855625 29855852 -56821696 + L1M4 LINE L1 4904 5129 -1017 350 207 0 49 chr18 29856038 29856120 -56821428 - MER58 DNA MER1_type -10 2410 128 35 0 0 0 chr18 29856143 29856178 -56821370 + AT_rich Low_complexity Low_complexity 1 35 0 236 274 0 0 chr18 29856311 29856362 -56821186 - MIR3 SINE MIR -49 159 109 408 297 41 51 chr18 29857977 29858173 -56819375 + L1ME3A LINE L1 4031 4224 -1922 424 283 36 20 chr18 29858243 29858494 -56819054 + L1ME3A LINE L1 4392 4646 -1500 566 200 122 0 chr18 29858540 29858655 -56818893 + FLAM_C SINE Alu 2 130 -3 216 0 0 0 chr18 29858675 29858699 -56818849 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 28 71 0 0 chr18 29859072 29859128 -56818420 + AT_rich Low_complexity Low_complexity 1 56 0 345 282 80 16 chr18 29859588 29859776 -56817772 + L1ME3A LINE L1 5682 5881 -289 22 0 0 0 chr18 29860884 29860906 -56816642 + AT_rich Low_complexity Low_complexity 1 22 0 206 265 0 0 chr18 29861756 29861805 -56815743 - L2 LINE L2 -2 3311 3263 425 189 22 11 chr18 29862498 29862588 -56814960 - MLT1H LTR MaLR -22 527 437 273 223 29 114 chr18 29862584 29862759 -56814789 - Charlie2 DNA MER1_type -811 2051 1892 * 887 248 191 31 chr18 29862819 29863170 -56814378 - MLT1H LTR MaLR -148 407 1 184 304 43 70 chr18 29863448 29863563 -56813985 + MIR3 SINE MIR 90 201 -7 313 281 188 0 chr18 29863683 29863779 -56813769 + L2 LINE L2 3143 3256 -16 235 363 37 0 chr18 29863932 29864067 -56813481 + Charlie2 DNA MER1_type 182 321 -2541 574 292 25 13 chr18 29864080 29864316 -56813232 + Charlie2 DNA MER1_type 1862 2100 -762 490 211 0 0 chr18 29864471 29864566 -56812982 + FLAM_A SINE Alu 16 110 -32 261 0 0 0 chr18 29864567 29864596 -56812952 + (TC)n Simple_repeat Simple_repeat 2 30 0 228 35 0 0 chr18 29864614 29864643 -56812905 + (CA)n Simple_repeat Simple_repeat 2 30 0 257 268 0 0 chr18 29864646 29864717 -56812831 + L1MC4 LINE L1 6614 6684 -1358 704 250 35 0 chr18 29864979 29865151 -56812397 - MER45A DNA AcHobo 0 178 1 1315 242 40 49 chr18 29867128 29867553 -56809995 - MLT1D LTR MaLR -79 426 6 202 179 250 0 chr18 29867579 29867635 -56809913 + MIR SINE MIR 167 236 -26 3499 223 51 62 chr18 29867671 29868250 -56809298 + MER45B DNA AcHobo 59 643 -938 2196 114 3 0 chr18 29868250 29868548 -56809000 + AluSp SINE Alu 1 299 -14 432 0 0 0 chr18 29868548 29868596 -56808952 + (TA)n Simple_repeat Simple_repeat 2 49 0 3499 223 51 62 chr18 29868596 29868726 -56808822 + MER45B DNA AcHobo 642 772 -809 7494 30 1 0 chr18 29868726 29869949 -56807599 + L1PA3 LINE L1 4922 6150 -5 3499 223 51 62 chr18 29869949 29870230 -56807318 + MER45B DNA AcHobo 772 1040 0 356 318 28 9 chr18 29870241 29870348 -56807200 + MIR SINE MIR 34 142 -120 289 289 127 36 chr18 29871374 29871540 -56806008 + MIR SINE MIR 36 216 -46 694 213 52 0 chr18 29873421 29873557 -56803991 + Tigger3(Golem) DNA MER2_type 1 143 -2886 * 1423 188 12 0 chr18 29873553 29873808 -56803740 + Tigger3(Golem) DNA MER2_type 2771 3028 -1 254 391 24 21 chr18 29876182 29876465 -56801083 - L2 LINE L2 -17 3296 2917 218 323 61 10 chr18 29876509 29876608 -56800940 - MIR SINE MIR -65 143 40 382 331 78 18 chr18 29877570 29877854 -56799694 + L1M4 LINE L1 2288 2588 -3558 1056 188 100 52 chr18 29877896 29878108 -56799440 + MER63 DNA MER1_type 736 969 -93 697 122 43 0 chr18 29878108 29878223 -56799325 - L1PA13 LINE L1 0 6163 6044 1056 188 100 52 chr18 29878223 29878319 -56799229 + MER63 DNA MER1_type 969 1059 -3 301 319 25 0 chr18 29878409 29878528 -56799020 + Charlie2b DNA MER1_type 530 651 -2131 189 0 0 0 chr18 29878832 29878853 -56798695 + (TTA)n Simple_repeat Simple_repeat 3 23 0 1312 124 9 4 chr18 29878854 29879079 -56798469 - L1MA1 LINE L1 0 6302 6077 2155 107 0 0 chr18 29879190 29879471 -56798077 - AluSg SINE Alu -29 281 1 2065 144 41 24 chr18 29879682 29880051 -56797497 - THE1C LTR MaLR 0 375 1 512 326 60 32 chr18 29880136 29880731 -56796817 - L1ME3A LINE L1 -215 5955 5344 295 250 92 73 chr18 29880730 29880990 -56796558 - HAL1 LINE L1 -838 1669 1405 * 464 285 52 36 chr18 29881037 29881286 -56796262 - L1MEd LINE L1 -4910 1209 957 890 226 18 14 chr18 29881508 29881725 -56795823 - MER20 DNA MER1_type 0 219 2 280 319 94 6 chr18 29881739 29881899 -56795649 + L1MC4 LINE L1 7505 7678 -364 341 273 36 56 chr18 29881931 29882248 -56795300 + L1MC4 LINE L1 7753 7995 0 274 315 112 33 chr18 29882457 29882698 -56794850 + MIR SINE MIR 1 260 -2 624 269 72 28 chr18 29883655 29883904 -56793644 - MIR SINE MIR -1 261 2 21 36 0 0 chr18 29883912 29883940 -56793608 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 29884830 29884858 -56792690 + AT_rich Low_complexity Low_complexity 1 28 0 448 167 36 0 chr18 29885053 29885137 -56792411 - Tigger5 DNA MER2_type 0 2323 2237 229 264 0 0 chr18 29885147 29885200 -56792348 - Tigger5 DNA MER2_type -2269 54 2 23 78 0 0 chr18 29885314 29885365 -56792183 + AT_rich Low_complexity Low_complexity 1 51 0 270 0 0 0 chr18 29885957 29885987 -56791561 + (T)n Simple_repeat Simple_repeat 1 30 0 384 258 34 70 chr18 29886960 29887245 -56790303 - L1MC4 LINE L1 -740 7221 6982 402 301 25 6 chr18 29887335 29887498 -56790050 - L1MC4 LINE L1 -1013 7029 6864 2883 232 112 24 chr18 29887742 29889893 -56787655 + L1MCb LINE L1 10 2477 -4087 1041 262 12 6 chr18 29889871 29890199 -56787349 + L1MCb LINE L1 2689 3018 -3546 * 282 87 0 0 chr18 29890370 29890416 -56787132 + (TG)n Simple_repeat Simple_repeat 2 47 0 1430 137 0 5 chr18 29890522 29890733 -56786815 + LOR1a LTR ERV1 288 497 0 23 54 0 0 chr18 29892177 29892214 -56785334 + AT_rich Low_complexity Low_complexity 1 37 0 305 290 15 46 chr18 29893177 29893308 -56784240 + MIR SINE MIR 76 202 -60 839 240 64 5 chr18 29893737 29893941 -56783607 - MER58A DNA MER1_type -8 216 1 260 215 21 21 chr18 29894318 29894411 -56783137 + L1M4 LINE L1 4609 4701 -1445 921 225 74 63 chr18 29894493 29894937 -56782611 - L1M4 LINE L1 -962 5184 4736 341 303 83 38 chr18 29894961 29895357 -56782191 - L1M4 LINE L1 -1797 4349 3936 4358 229 90 42 chr18 29895362 29895661 -56781887 + L1M4 LINE L1 5 288 -6254 1977 125 4 0 chr18 29895661 29896100 -56781448 - AluSx SINE Alu 0 440 1 4358 229 90 42 chr18 29896100 29896953 -56780595 + L1M4 LINE L1 288 1237 -5305 1857 154 27 27 chr18 29896953 29897290 -56780258 + MER1B DNA MER1_type 1 337 0 4358 229 90 42 chr18 29897290 29897497 -56780051 + L1M4 LINE L1 1237 1433 -5109 1848 231 83 57 chr18 29897595 29898459 -56779089 - L1MDa LINE L1 -3890 2650 1764 1127 191 184 0 chr18 29898469 29898741 -56778807 - MER2 DNA MER2_type -7 338 17 2100 213 75 40 chr18 29898754 29899474 -56778074 - L1MDa LINE L1 -4785 1755 1011 267 304 54 18 chr18 29899594 29899762 -56777786 - L1M4 LINE L1 -2340 3806 3633 4055 218 68 38 chr18 29899863 29901125 -56776423 + L1M4 LINE L1 3716 5015 -1131 241 232 0 0 chr18 29901138 29901194 -56776354 + L1M LINE L1 5353 5408 -770 339 149 43 53 chr18 29901196 29901290 -56776258 + L1MB8 LINE L1 6085 6177 -1 283 319 117 23 chr18 29901500 29902241 -56775307 - L1M4 LINE L1 -2871 3275 2465 742 258 6 6 chr18 29902250 29902428 -56775120 + MER45A DNA AcHobo 1 178 0 181 376 89 20 chr18 29902734 29902835 -56774713 + L2 LINE L2 3162 3269 -3 461 338 46 29 chr18 29903135 29903375 -56774173 + LTR16C LTR ERVL 245 488 -3 196 171 0 0 chr18 29903377 29903412 -56774136 + L2 LINE L2 3279 3313 0 2338 185 60 92 chr18 29904006 29904628 -56772920 + LTR31 LTR ERV1 3 604 -15 23 0 0 0 chr18 29904639 29904662 -56772886 + AT_rich Low_complexity Low_complexity 1 23 0 491 282 75 48 chr18 29904806 29905182 -56772366 - L1MC4a LINE L1 -1834 5974 5589 484 301 129 50 chr18 29906445 29906884 -56770664 - MLT1H LTR MaLR -6 584 76 1724 186 34 12 chr18 29907128 29907455 -56770093 - MER1B DNA MER1_type 0 339 6 577 252 67 4 chr18 29908105 29908343 -56769205 + L1M4 LINE L1 3066 3318 -2828 4045 199 21 51 chr18 29908364 29909260 -56768288 + L1ME1 LINE L1 6 874 -5552 233 213 21 0 chr18 29909465 29909512 -56768036 - MER6B DNA MER2_type -1 209 162 2253 53 3 11 chr18 29909648 29909932 -56767616 - AluY SINE Alu -10 301 20 1165 174 24 10 chr18 29910169 29910376 -56767172 + MER6B DNA MER2_type 1 210 0 22 35 0 0 chr18 29910541 29910570 -56766978 + AT_rich Low_complexity Low_complexity 1 29 0 734 252 87 52 chr18 29910694 29910961 -56766587 + L1ME1 LINE L1 3823 4112 -2314 2251 53 0 74 chr18 29910961 29911284 -56766264 - AluY SINE Alu -12 299 1 734 252 87 52 chr18 29911284 29911441 -56766107 + L1ME1 LINE L1 4112 4262 -2164 3468 239 44 41 chr18 29911536 29913710 -56763838 + L1ME1 LINE L1 4266 6441 -5 339 264 5 104 chr18 29914711 29914904 -56762644 - MER31-int LTR ERV1 -2365 2571 2398 263 215 15 96 chr18 29915859 29915994 -56761554 - MER31-int LTR ERV1 -3503 1433 1310 2427 158 24 98 chr18 29916062 29916611 -56760937 + MLT2B2 LTR ERVL 8 515 0 355 285 8 0 chr18 29917361 29917484 -56760064 - LTR37A LTR ERV1 -22 404 281 286 266 9 18 chr18 29917491 29917600 -56759948 + (TA)n Simple_repeat Simple_repeat 2 109 0 587 224 18 82 chr18 29917752 29917922 -56759626 + MLT1E3 LTR MaLR 61 219 -405 247 100 60 0 chr18 29918185 29918235 -56759313 + MLT2F LTR ERVL 609 661 -2 474 217 83 123 chr18 29918272 29918549 -56758999 - LTR37B LTR ERV1 -192 276 11 301 252 118 0 chr18 29918582 29918701 -56758847 + L1ME LINE L1 5197 5329 -817 5333 58 0 0 chr18 29918701 29919368 -56758180 + L1PA6 LINE L1 5487 6153 -1 458 302 73 47 chr18 29919374 29919450 -56758098 + L1ME LINE L1 5290 5363 -799 1385 175 142 12 chr18 29919450 29919782 -56757766 + THE1C LTR MaLR 1 375 0 458 302 73 47 chr18 29919782 29920113 -56757435 + L1ME LINE L1 5363 5718 -444 461 184 0 0 chr18 29920358 29920445 -56757103 + AluJ/FRAM SINE Alu 220 306 -6 1623 282 173 13 chr18 29920462 29921249 -56756299 - L2 LINE L2 -1382 1932 1020 446 333 0 0 chr18 29921252 29921360 -56756188 - L2 LINE L2 -498 2816 2709 341 320 39 20 chr18 29921466 29921619 -56755929 - MIR SINE MIR -53 209 54 216 0 0 0 chr18 29921825 29921849 -56755699 + (ATG)n Simple_repeat Simple_repeat 3 26 0 292 293 13 0 chr18 29921867 29921942 -56755606 - MIR SINE MIR -19 243 168 589 279 41 0 chr18 29922521 29922668 -56754880 - MIR SINE MIR -103 159 7 5030 149 17 48 chr18 29923835 29924787 -56752761 - MER49 LTR ERV1 0 923 2 422 258 156 65 chr18 29925253 29925818 -56751730 - HAL1b LINE L1 0 1348 733 1588 293 52 62 chr18 29926111 29927215 -56750333 - HAL1 LINE L1 -13 2494 1401 1059 36 65 0 chr18 29927237 29927376 -56750172 - AluY SINE Alu -12 299 152 604 291 90 11 chr18 29927380 29927748 -56749800 - HAL1 LINE L1 -1120 1387 991 4155 177 19 39 chr18 29927762 29928615 -56748933 - L1MB2 LINE L1 -9 6162 5327 440 281 60 18 chr18 29928616 29928783 -56748765 - HAL1 LINE L1 -1561 946 773 290 209 23 39 chr18 29928842 29928971 -56748577 + T-rich Low_complexity Low_complexity 6 132 0 286 344 76 32 chr18 29930053 29930210 -56747338 + MIR3 SINE MIR 34 197 -11 22 0 0 0 chr18 29930229 29930251 -56747297 + AT_rich Low_complexity Low_complexity 1 22 0 5213 222 38 3 chr18 29930975 29931041 -56746507 - L1MB2 LINE L1 -1667 4479 4417 185 0 0 39 chr18 29931041 29931067 -56746481 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5213 222 38 3 chr18 29931067 29932266 -56745282 - L1MB2 LINE L1 -1729 4417 3170 608 229 6 0 chr18 29932566 29932732 -56744816 + GA-rich Low_complexity Low_complexity 2 168 0 30 27 0 0 chr18 29933422 29933459 -56744089 + AT_rich Low_complexity Low_complexity 1 37 0 352 353 90 20 chr18 29933535 29933779 -56743769 + MIR SINE MIR 2 262 0 43 20 0 0 chr18 29934634 29934684 -56742864 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr18 29934822 29934843 -56742705 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr18 29935202 29935232 -56742316 + AT_rich Low_complexity Low_complexity 1 30 0 408 306 83 0 chr18 29935608 29935765 -56741783 + MLT1J LTR MaLR 1 170 -341 391 224 0 0 chr18 29935792 29935868 -56741680 + Tigger3(Golem) DNA MER2_type 1 76 -2953 611 211 0 0 chr18 29935999 29936108 -56741440 + Tigger3(Golem) DNA MER2_type 2921 3029 0 686 274 50 46 chr18 29936114 29936395 -56741153 + MLT1J LTR MaLR 228 509 -2 557 329 109 6 chr18 29936834 29937165 -56740383 - L3 LINE CR1 -78 1499 1135 2069 135 0 0 chr18 29937242 29937539 -56740009 - AluSx SINE Alu -15 297 1 1896 149 18 24 chr18 29938023 29938358 -56739190 - MER1B DNA MER1_type 0 337 5 423 363 28 9 chr18 29939147 29939359 -56738189 - MIR SINE MIR -38 224 9 6661 73 10 0 chr18 29942406 29943661 -56733887 + L1PA7 LINE L1 4894 6154 0 244 266 31 0 chr18 29946021 29946085 -56731463 + MIR SINE MIR 78 143 -119 1931 103 0 0 chr18 29946101 29946408 -56731140 + AluSg SINE Alu 48 354 0 198 0 0 0 chr18 29947275 29947297 -56730251 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 3086 139 14 2 chr18 29947952 29948471 -56729077 - Tigger3(Golem) DNA MER2_type -1 3028 2504 3093 97 2 2 chr18 29948483 29948959 -56728589 - L1P LINE L1 -3346 2800 2325 10258 81 6 1 chr18 29948959 29951170 -56726378 + L1PA7 LINE L1 3919 6150 -4 1712 115 3 60 chr18 29951189 29951503 -56726045 - Tigger3(Golem) DNA MER2_type -625 2404 2109 676 233 0 0 chr18 29951491 29951624 -56725924 - Tigger3(Golem) DNA MER2_type -2896 133 1 * 32 26 0 0 chr18 29952390 29952429 -56725119 + AT_rich Low_complexity Low_complexity 1 39 0 10344 131 39 38 chr18 29953049 29953408 -56724140 - Tigger1 DNA MER2_type -481 1937 1580 2557 168 9 7 chr18 29953408 29953830 -56723718 - MSTB LTR MaLR 0 426 4 10344 131 39 38 chr18 29953830 29955397 -56722151 - Tigger1 DNA MER2_type -838 1580 10 22 70 0 0 chr18 29955993 29956036 -56721512 + AT_rich Low_complexity Low_complexity 1 43 0 614 320 81 9 chr18 29956443 29956665 -56720883 - MIR SINE MIR -2 260 23 24 0 0 0 chr18 29958634 29958658 -56718890 + AT_rich Low_complexity Low_complexity 1 24 0 2308 122 0 3 chr18 29959903 29960214 -56717334 + AluSq SINE Alu 1 310 -3 968 200 31 162 chr18 29960716 29961136 -56716412 - MLT1A1 LTR MaLR 0 365 1 331 309 54 20 chr18 29962489 29962638 -56714910 + MIR SINE MIR 57 210 -52 1907 161 0 0 chr18 29963164 29963463 -56714085 - AluSx SINE Alu -13 299 1 247 307 0 13 chr18 29964503 29964578 -56712970 - MIR SINE MIR -5 257 184 2076 144 3 0 chr18 29965095 29965394 -56712154 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr18 29965584 29965607 -56711941 + AT_rich Low_complexity Low_complexity 1 23 0 226 257 89 145 chr18 29965889 29966068 -56711480 + L2 LINE L2 2310 2478 -836 503 313 76 104 chr18 29966552 29967054 -56710494 + L2 LINE L2 2475 2962 -352 380 156 21 62 chr18 29967392 29967488 -56710060 + MLT1G1 LTR MaLR 3 94 -473 470 296 20 20 chr18 29967533 29967685 -56709863 + MLT1G1 LTR MaLR 154 305 -225 571 216 50 106 chr18 29967705 29967923 -56709625 - MER58A DNA MER1_type -13 211 6 491 273 56 37 chr18 29967964 29968125 -56709423 + MLT1G1 LTR MaLR 432 595 0 2205 128 0 3 chr18 29968572 29968876 -56708672 + AluSx SINE Alu 1 303 -9 21 57 0 0 chr18 29968989 29969024 -56708524 + AT_rich Low_complexity Low_complexity 1 35 0 914 197 9 58 chr18 29969129 29969352 -56708196 - AluJo SINE Alu -16 296 85 1638 194 14 0 chr18 29970769 29971057 -56706491 - AluJb SINE Alu -20 292 1 288 197 16 0 chr18 29971244 29971305 -56706243 + MLT1F LTR MaLR 481 542 0 210 245 113 57 chr18 29972450 29972556 -56704992 - MIR SINE MIR -137 125 14 181 175 0 35 chr18 29972565 29972622 -56704926 + CT-rich Low_complexity Low_complexity 4 58 0 21 0 0 0 chr18 29972691 29972712 -56704836 + AT_rich Low_complexity Low_complexity 1 21 0 1569 162 86 13 chr18 29975438 29975752 -56701796 + MER1B DNA MER1_type 1 337 0 2013 66 13 0 chr18 29975998 29976299 -56701249 - L1P LINE L1 -825 5321 5017 2250 98 0 3 chr18 29976300 29976626 -56700922 + L1PA8 LINE L1 5848 6172 0 221 189 19 0 chr18 29977140 29977193 -56700355 + A-rich Low_complexity Low_complexity 6 59 0 22 56 0 0 chr18 29977764 29977800 -56699748 + AT_rich Low_complexity Low_complexity 1 36 0 4557 148 3 6 chr18 29979033 29979757 -56697791 - MER72 LTR ERV1 0 722 1 186 43 0 0 chr18 29979780 29979803 -56697745 + (TC)n Simple_repeat Simple_repeat 1 23 0 820 237 31 70 chr18 29980489 29980904 -56696644 + LTR8 LTR ERV1 310 691 0 311 290 32 0 chr18 29981529 29981622 -56695926 + MIR SINE MIR 6 101 -161 2486 104 63 23 chr18 29981626 29982057 -56695491 - LTR7 LTR ERV1 -2 448 1 2332 94 48 0 chr18 29982057 29982429 -56695119 - HERVH LTR ERV1 0 7713 7324 1354 110 18 9 chr18 29982429 29982647 -56694901 - HERVH LTR ERV1 -1894 5819 5600 3333 160 5 3 chr18 29982654 29983222 -56694326 - HERVH LTR ERV1 -2570 5143 4575 1276 98 0 0 chr18 29983219 29983402 -56694146 - HERVH LTR ERV1 -3043 4670 4488 * 3211 109 4 6 chr18 29983404 29983907 -56693641 - HERVH LTR ERV1 -3720 3993 3492 809 163 14 0 chr18 29983899 29984046 -56693502 - HERVH LTR ERV1 -4425 3288 3140 * 18505 90 25 32 chr18 29984040 29987046 -56690502 - HERVH LTR ERV1 -4726 2987 1 2386 104 59 21 chr18 29987055 29987479 -56690069 - LTR7 LTR ERV1 -10 440 1 251 343 70 0 chr18 29987481 29987624 -56689924 + MIR SINE MIR 110 262 0 1575 216 39 44 chr18 29987628 29988039 -56689509 - LTR2 LTR ERV1 0 449 41 24 0 0 0 chr18 29988620 29988644 -56688904 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr18 29988839 29988860 -56688688 + AT_rich Low_complexity Low_complexity 1 21 0 872 345 162 46 chr18 29988973 29990025 -56687523 - L2 LINE L2 -17 3255 2327 1802 103 4 38 chr18 29990025 29990288 -56687260 + AluSx SINE Alu 50 303 -9 872 345 162 46 chr18 29990288 29991250 -56686298 - L2 LINE L2 -945 2327 998 23 54 0 0 chr18 29991988 29992025 -56685523 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr18 29992148 29992176 -56685372 + AT_rich Low_complexity Low_complexity 1 28 0 33 25 0 0 chr18 29992369 29992409 -56685139 + AT_rich Low_complexity Low_complexity 1 40 0 215 309 0 0 chr18 29994863 29994931 -56682617 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 301 318 88 75 chr18 29994976 29995284 -56682264 - L2 LINE L2 -22 3250 2939 261 250 15 15 chr18 29996925 29997061 -56680487 + (TTA)n Simple_repeat Simple_repeat 1 136 0 24 32 0 0 chr18 29997061 29997092 -56680456 + AT_rich Low_complexity Low_complexity 1 31 0 351 253 153 50 chr18 29997099 29997301 -56680247 - L1MEd LINE L1 -5212 907 685 25 51 0 0 chr18 29998258 29998297 -56679251 + AT_rich Low_complexity Low_complexity 1 39 0 1921 160 42 6 chr18 29998856 29999187 -56678361 - MER2 DNA MER2_type -1 343 1 22 0 0 0 chr18 29999272 29999294 -56678254 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr18 30000631 30000680 -56676868 + AT_rich Low_complexity Low_complexity 1 49 0 722 278 94 15 chr18 30000869 30001200 -56676348 + L2 LINE L2 2956 3312 -1 577 203 20 14 chr18 30002014 30002162 -56675386 - L1MA4 LINE L1 -1 6299 6151 275 283 113 28 chr18 30002894 30003000 -56674548 - MIR3 SINE MIR -11 197 83 386 360 39 75 chr18 30003470 30003803 -56673745 - L2 LINE L2 -1 3271 2951 301 234 43 43 chr18 30003937 30004031 -56673517 - MLT1I LTR MaLR -3 406 313 416 280 54 25 chr18 30004083 30004273 -56673275 - MLT1J2 LTR MaLR -211 235 42 1915 127 41 3 chr18 30004375 30004666 -56672882 - AluSx SINE Alu -10 302 1 507 188 0 0 chr18 30005818 30005903 -56671645 - MSTB LTR MaLR -341 85 1 290 265 60 66 chr18 30006010 30006176 -56671372 + MIR SINE MIR 90 254 -8 2183 179 44 2 chr18 30006266 30006675 -56670873 - MSTB LTR MaLR 0 426 1 321 264 101 51 chr18 30007480 30007658 -56669890 - L2 LINE L2 -9 3304 3118 214 162 0 0 chr18 30008520 30008557 -56668991 - MIR3 SINE MIR -6 202 166 282 295 69 49 chr18 30008558 30008725 -56668823 + MER5A DNA MER1_type 14 172 -6 33 0 0 0 chr18 30008821 30008854 -56668694 + AT_rich Low_complexity Low_complexity 1 33 0 796 272 111 0 chr18 30009147 30009382 -56668166 - MIR SINE MIR 0 262 2 789 276 39 54 chr18 30010185 30010518 -56667030 - MLT1I LTR MaLR 0 409 82 984 320 95 30 chr18 30011580 30012134 -56665414 + L2 LINE L2 2484 3063 -250 1761 262 88 10 chr18 30012171 30012668 -56664880 - MLT1F1 LTR MaLR -12 555 20 1720 187 20 3 chr18 30012669 30012969 -56664579 - AluJb SINE Alu -7 305 1 403 322 35 85 chr18 30013139 30013293 -56664255 + MIR SINE MIR 17 154 -108 2175 119 0 3 chr18 30013293 30013588 -56663960 + AluSg SINE Alu 2 295 -15 403 322 35 85 chr18 30013588 30013691 -56663857 + MIR SINE MIR 154 261 -1 275 286 34 59 chr18 30013697 30013816 -56663732 + L2 LINE L2 3149 3264 -49 22 0 0 0 chr18 30013858 30013880 -56663668 + AT_rich Low_complexity Low_complexity 1 22 0 24 53 0 0 chr18 30014453 30014491 -56663057 + AT_rich Low_complexity Low_complexity 1 38 0 280 333 44 31 chr18 30015392 30015551 -56661997 - L2 LINE L2 -12 3301 3141 257 253 92 23 chr18 30015595 30015682 -56661866 - L2 LINE L2 -2 3311 3219 781 289 78 56 chr18 30015805 30015972 -56661576 - L2 LINE L2 -460 2854 2692 2169 127 7 0 chr18 30015972 30016280 -56661268 + AluSq SINE Alu 1 310 -3 781 289 78 56 chr18 30016280 30016507 -56661041 - L2 LINE L2 -622 2692 2451 206 369 60 0 chr18 30016530 30016614 -56660934 - L2 LINE L2 -219 3053 2965 2088 191 3 3 chr18 30018606 30018961 -56658587 + MLT1A1 LTR MaLR 3 357 -8 223 139 0 0 chr18 30018968 30019004 -56658544 - MIR SINE MIR -109 153 118 214 167 0 24 chr18 30019085 30019127 -56658421 + (CTA)n Simple_repeat Simple_repeat 3 43 0 2215 186 21 78 chr18 30019127 30019692 -56657856 + LTR8 LTR ERV1 1 533 -158 748 43 11 0 chr18 30019692 30019785 -56657763 - AluSp SINE Alu -171 142 49 1082 138 11 6 chr18 30019785 30019959 -56657589 + AluSp SINE Alu 136 310 -3 1021 112 92 0 chr18 30019959 30020111 -56657437 + LTR8 LTR ERV1 526 691 0 1710 145 35 14 chr18 30021415 30021705 -56655843 - AluSq SINE Alu -17 296 1 180 200 0 0 chr18 30021797 30021837 -56655711 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 2907 184 50 61 chr18 30022510 30023245 -56654303 + LTR8A LTR ERV1 1 727 0 275 316 45 38 chr18 30023353 30023486 -56654062 - MIR SINE MIR -76 186 53 2638 23 0 13 chr18 30023762 30024070 -56653478 + AluY SINE Alu 1 304 -7 218 323 0 15 chr18 30024345 30024410 -56653138 - MIR SINE MIR -125 83 20 339 294 126 56 chr18 30025643 30025775 -56651773 - LTR16A1 LTR ERVL -2 455 334 2046 196 3 0 chr18 30025775 30026137 -56651411 + MLT1A1 LTR MaLR 3 365 0 339 294 126 56 chr18 30026137 30026235 -56651313 - LTR16A1 LTR ERVL -123 334 209 225 0 0 0 chr18 30026810 30026835 -56650713 + (A)n Simple_repeat Simple_repeat 1 25 0 736 264 103 39 chr18 30027642 30028002 -56649546 + LTR33 LTR ERVL 105 487 -34 2236 244 121 29 chr18 30028115 30029012 -56648536 + Zaphod DNA AcHobo 9 988 -3043 253 114 0 0 chr18 30029012 30029047 -56648501 - MER58A DNA MER1_type 0 224 190 594 193 9 0 chr18 30029051 30029160 -56648388 - MER58A DNA MER1_type 0 151 42 1166 223 105 10 chr18 30029193 30029601 -56647947 + Zaphod DNA AcHobo 3585 4031 0 252 329 168 0 chr18 30029658 30029795 -56647753 + Charlie8 DNA MER1_type 1 160 -2257 21 71 0 0 chr18 30030816 30030858 -56646690 + AT_rich Low_complexity Low_complexity 1 42 0 853 209 114 0 chr18 30030952 30031163 -56646385 + MER106A DNA MER1_type 1 235 -1 21 36 0 0 chr18 30033212 30033240 -56644308 + AT_rich Low_complexity Low_complexity 1 28 0 1467 199 7 24 chr18 30034190 30034487 -56643061 + AluJo SINE Alu 5 296 -16 237 65 0 0 chr18 30035648 30035679 -56641869 + (CA)n Simple_repeat Simple_repeat 2 32 0 2456 192 91 32 chr18 30035822 30036469 -56641079 - L1MD2 LINE L1 -2 6357 5673 278 346 0 0 chr18 30036616 30036697 -56640851 + L2 LINE L2 3151 3231 -41 1203 223 45 45 chr18 30036704 30037059 -56640489 + MLT1A1 LTR MaLR 11 365 0 246 310 163 16 chr18 30037177 30037306 -56640242 - MIR SINE MIR -112 150 3 13025 35 2 0 chr18 30038138 30039709 -56637839 + L1P LINE L1 3518 5091 -1055 893 268 25 28 chr18 30039709 30039993 -56637555 + LTR40a LTR ERVL 235 517 -2 715 185 24 47 chr18 30040115 30040326 -56637222 + L1ME4a LINE L1 4567 4772 -1374 209 305 34 0 chr18 30041028 30041087 -56636461 - L2 LINE L2 -4 3309 3249 23 0 0 0 chr18 30041281 30041304 -56636244 + AT_rich Low_complexity Low_complexity 1 23 0 318 269 28 0 chr18 30041414 30041536 -56636012 - L1MA10 LINE L1 -41 6293 6009 789 253 8 0 chr18 30041575 30041812 -56635736 + L1ME4a LINE L1 4959 5197 -949 5723 179 34 48 chr18 30041812 30043042 -56634506 + L1MA9 LINE L1 4042 5288 -1024 1316 196 139 27 chr18 30043042 30043451 -56634097 - MSTB2 LTR MaLR -2 455 1 5723 179 34 48 chr18 30043451 30043970 -56633578 + L1MA9 LINE L1 5288 5771 -541 432 0 0 0 chr18 30043970 30044018 -56633530 + (TG)n Simple_repeat Simple_repeat 2 49 0 5723 179 34 48 chr18 30044018 30044363 -56633185 + L1MA9 LINE L1 5771 6119 -193 1164 148 45 0 chr18 30044436 30044638 -56632910 + L1MA9 LINE L1 6100 6310 -2 304 189 156 16 chr18 30044992 30045114 -56632434 + L1ME4a LINE L1 5738 5876 -245 22 35 0 0 chr18 30047979 30048008 -56629540 + AT_rich Low_complexity Low_complexity 1 29 0 1832 136 6 54 chr18 30049215 30049568 -56627980 + MER1B DNA MER1_type 2 337 0 27 73 0 0 chr18 30049879 30049934 -56627614 + AT_rich Low_complexity Low_complexity 1 55 0 194 227 13 0 chr18 30049956 30050031 -56627517 + (TA)n Simple_repeat Simple_repeat 1 76 0 23 0 0 0 chr18 30050215 30050238 -56627310 + AT_rich Low_complexity Low_complexity 1 23 0 206 156 22 0 chr18 30052316 30052361 -56625187 + GA-rich Low_complexity Low_complexity 2 47 0 1357 233 36 22 chr18 30055435 30055795 -56621753 + MLT1A1 LTR MaLR 1 365 0 227 351 8 60 chr18 30055929 30056063 -56621485 - MIR SINE MIR -62 146 20 213 39 0 0 chr18 30056086 30056112 -56621436 + (T)n Simple_repeat Simple_repeat 1 26 0 365 308 58 0 chr18 30057508 30057628 -56619920 + L2 LINE L2 3182 3308 -5 1346 234 53 48 chr18 30057628 30058082 -56619466 - LTR16A1 LTR ERVL 0 457 2 387 330 124 0 chr18 30058350 30058544 -56619004 + MIR SINE MIR 20 237 -25 328 314 52 48 chr18 30058736 30058984 -56618564 + L2 LINE L2 3051 3299 -14 23 33 0 0 chr18 30059526 30059556 -56617992 + AT_rich Low_complexity Low_complexity 1 30 0 25 75 0 0 chr18 30061590 30061643 -56615905 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr18 30062406 30062427 -56615121 + AT_rich Low_complexity Low_complexity 1 21 0 399 258 42 0 chr18 30063196 30063363 -56614185 + (TA)n Simple_repeat Simple_repeat 1 174 0 624 204 74 23 chr18 30063967 30064143 -56613405 - MER5A DNA MER1_type 0 189 5 271 299 34 26 chr18 30064295 30064412 -56613136 - MIR SINE MIR -45 217 100 188 83 0 28 chr18 30064693 30064729 -56612819 + (TTTTTG)n Simple_repeat Simple_repeat 1 35 0 293 135 0 0 chr18 30065039 30065091 -56612457 + L1MA4 LINE L1 6244 6295 -5 193 277 327 0 chr18 30065989 30066090 -56611458 + L2 LINE L2 3138 3271 -1 556 250 39 8 chr18 30066945 30067073 -56610475 + L2 LINE L2 3182 3313 0 1275 248 107 48 chr18 30067292 30067401 -56610147 - Charlie7 DNA MER1_type -1 2611 2510 3445 165 46 43 chr18 30067401 30068184 -56609364 + LTR1 LTR ERV1 1 785 0 1275 248 107 48 chr18 30068184 30068881 -56608667 - Charlie7 DNA MER1_type -102 2510 1758 356 151 55 14 chr18 30068970 30069043 -56608505 - Charlie7 DNA MER1_type -863 1749 1674 364 244 100 33 chr18 30069269 30069449 -56608099 - Charlie7 DNA MER1_type -2418 194 3 2467 78 0 0 chr18 30069984 30070293 -56607255 - AluY SINE Alu -2 309 1 1380 135 45 9 chr18 30071760 30071982 -56605566 - MER30 DNA MER1_type 0 230 1 22 0 0 0 chr18 30072359 30072381 -56605167 + AT_rich Low_complexity Low_complexity 1 22 0 2777 7 0 3 chr18 30072596 30072906 -56604642 + AluYa5 SINE Alu 1 309 -2 1942 149 3 0 chr18 30072965 30073253 -56604295 + AluSq SINE Alu 2 290 -23 891 216 274 6 chr18 30073350 30073701 -56603847 + L1MA6 LINE L1 5850 6294 -6 26 0 0 0 chr18 30073841 30073867 -56603681 + AT_rich Low_complexity Low_complexity 1 26 0 457 269 35 21 chr18 30075096 30075241 -56602307 - MIR SINE MIR 0 262 116 231 372 60 22 chr18 30075575 30075758 -56601790 - MIR SINE MIR -64 198 9 279 0 0 0 chr18 30077112 30077143 -56600405 + (CA)n Simple_repeat Simple_repeat 2 32 0 30 27 0 0 chr18 30077529 30077566 -56599982 + AT_rich Low_complexity Low_complexity 1 37 0 311 306 63 82 chr18 30078410 30078822 -56598726 + MLT1I LTR MaLR 1 404 -5 446 236 94 0 chr18 30080970 30081097 -56596451 + MLT1I LTR MaLR 263 401 -8 180 0 0 0 chr18 30081407 30081427 -56596121 + (T)n Simple_repeat Simple_repeat 1 20 0 222 91 0 0 chr18 30081797 30081830 -56595718 + (TTTAA)n Simple_repeat Simple_repeat 1 33 0 479 279 86 71 chr18 30082439 30082719 -56594829 + LTR16A1 LTR ERVL 174 457 0 749 312 60 25 chr18 30082732 30083046 -56594502 + MLT1I LTR MaLR 85 409 0 320 252 136 45 chr18 30084426 30084610 -56592938 - MIR SINE MIR -32 230 34 22 0 0 0 chr18 30085283 30085305 -56592243 + AT_rich Low_complexity Low_complexity 1 22 0 29 78 0 0 chr18 30085407 30085471 -56592077 + AT_rich Low_complexity Low_complexity 1 64 0 656 325 52 12 chr18 30086600 30086852 -56590696 + MIR SINE MIR 1 262 0 23 78 0 0 chr18 30087053 30087104 -56590444 + AT_rich Low_complexity Low_complexity 1 51 0 562 346 85 25 chr18 30087583 30088103 -56589445 - L2 LINE L2 -786 2528 1978 966 63 0 0 chr18 30088245 30088371 -56589177 + (TA)n Simple_repeat Simple_repeat 2 127 0 330 276 29 9 chr18 30088529 30088634 -56588914 - MIR SINE MIR -108 154 48 450 156 9 18 chr18 30088646 30088755 -56588793 + CT-rich Low_complexity Low_complexity 4 111 0 753 265 0 0 chr18 30088759 30088921 -56588627 - FAM SINE Alu -13 162 1 24 0 0 0 chr18 30089514 30089538 -56588010 + AT_rich Low_complexity Low_complexity 1 24 0 377 306 147 30 chr18 30090669 30091002 -56586546 - MLT1K LTR MaLR -134 454 83 523 336 80 4 chr18 30091252 30091478 -56586070 + MIR SINE MIR 20 262 0 907 216 96 142 chr18 30091757 30091961 -56585587 + MLT1F LTR MaLR 1 213 -329 276 120 0 0 chr18 30091961 30092011 -56585537 + (CA)n Simple_repeat Simple_repeat 2 51 0 907 216 96 142 chr18 30092011 30092370 -56585178 + MLT1F LTR MaLR 213 538 -4 221 116 0 23 chr18 30092853 30092896 -56584652 + (CA)n Simple_repeat Simple_repeat 1 42 0 372 59 0 0 chr18 30092920 30092971 -56584577 + (TC)n Simple_repeat Simple_repeat 1 51 0 330 319 96 30 chr18 30093839 30093974 -56583574 + MLT1F1 LTR MaLR 179 322 -245 * 344 344 23 0 chr18 30093964 30094092 -56583456 + MLT1F1 LTR MaLR 428 558 -9 210 299 47 63 chr18 30094655 30094782 -56582766 - L2 LINE L2 -215 3057 2933 424 339 54 0 chr18 30095024 30095154 -56582394 - L2 LINE L2 -12 3301 3165 3539 199 29 47 chr18 30095257 30096169 -56581379 - L1MD1 LINE L1 0 6636 5742 * 3811 227 54 30 chr18 30096161 30097746 -56579802 - L1MD1 LINE L1 -3389 3151 1541 971 289 96 49 chr18 30097816 30098242 -56579306 - MLT1H LTR MaLR -24 525 80 487 338 92 11 chr18 30098323 30098672 -56578876 - L2 LINE L2 -693 2621 2245 26 30 0 0 chr18 30099520 30099553 -56577995 + AT_rich Low_complexity Low_complexity 1 33 0 247 348 93 42 chr18 30100823 30101059 -56576489 + L2 LINE L2 567 814 -2500 507 318 52 60 chr18 30102070 30102177 -56575371 - MIR SINE MIR 0 262 156 1314 244 109 0 chr18 30102177 30102534 -56575014 - MSTD LTR MaLR 0 396 1 507 318 52 60 chr18 30102534 30102678 -56574870 - MIR SINE MIR -106 156 13 23 0 0 0 chr18 30102864 30102887 -56574661 + AT_rich Low_complexity Low_complexity 1 23 0 241 245 0 0 chr18 30103438 30103487 -56574061 + (TTCA)n Simple_repeat Simple_repeat 4 52 0 24 91 0 0 chr18 30104388 30104454 -56573094 + AT_rich Low_complexity Low_complexity 1 66 0 181 316 184 31 chr18 30104511 30104609 -56572939 - MIR SINE MIR -141 121 9 27 62 0 0 chr18 30105407 30105455 -56572093 + AT_rich Low_complexity Low_complexity 1 48 0 183 80 0 0 chr18 30105738 30105763 -56571785 + (TG)n Simple_repeat Simple_repeat 2 26 0 225 119 0 0 chr18 30105763 30105805 -56571743 - LTR66 LTR ERVL -171 439 398 584 183 19 0 chr18 30106176 30106280 -56571268 - L1M2 LINE L1 -532 5780 5675 272 285 108 0 chr18 30106461 30106591 -56570957 + MER103 DNA DNA 21 164 -2 12546 197 25 7 chr18 30107299 30107810 -56569738 - L1MA5 LINE L1 0 7362 6862 231 36 0 0 chr18 30107810 30107838 -56569710 + (TA)n Simple_repeat Simple_repeat 1 28 0 12546 197 25 7 chr18 30107838 30111092 -56566456 - L1MA5 LINE L1 -500 6862 3523 5519 229 32 30 chr18 30111098 30112619 -56564929 - L1MA5 LINE L1 -4085 3124 1600 2327 258 66 29 chr18 30112597 30113389 -56564159 - L1MA5 LINE L1 -6409 800 1 * 254 254 17 0 chr18 30114551 30114610 -56562938 + (CA)n Simple_repeat Simple_repeat 1 60 0 22 0 0 0 chr18 30116633 30116655 -56560893 + AT_rich Low_complexity Low_complexity 1 22 0 200 213 98 49 chr18 30116873 30116934 -56560614 - MIR SINE MIR -86 176 113 1914 167 28 63 chr18 30117276 30117736 -56559812 + MER31B LTR ERV1 23 466 0 318 253 147 35 chr18 30118644 30118814 -56558734 + MIR SINE MIR 53 241 -21 2327 98 0 3 chr18 30119785 30120090 -56557458 + AluSc SINE Alu 6 309 0 696 129 234 0 chr18 30120282 30120406 -56557142 - MER93b LTR ERV1 -220 153 1 594 227 31 47 chr18 30120495 30120623 -56556925 + MER5A DNA MER1_type 11 136 -53 218 274 16 0 chr18 30121853 30121915 -56555633 + L2 LINE L2 3168 3230 -83 229 339 45 127 chr18 30122758 30122979 -56554569 - L2 LINE L2 -5 3267 3065 441 0 0 0 chr18 30123174 30123223 -56554325 + (CA)n Simple_repeat Simple_repeat 2 50 0 300 227 21 72 chr18 30123242 30123339 -56554209 - L1MC4 LINE L1 -1337 6705 6614 180 0 0 0 chr18 30123484 30123504 -56554044 + (TA)n Simple_repeat Simple_repeat 2 21 0 192 97 0 0 chr18 30123506 30123537 -56554011 + (GA)n Simple_repeat Simple_repeat 2 32 0 1495 254 68 41 chr18 30123927 30124459 -56553089 - MLT1E2 LTR MaLR -80 546 1 2223 134 18 3 chr18 30124532 30124875 -56552673 - MER7A DNA MER2_type 0 346 1 223 353 49 29 chr18 30125161 30125263 -56552285 + MIR3 SINE MIR 78 181 -27 21 0 0 0 chr18 30125446 30125467 -56552081 + AT_rich Low_complexity Low_complexity 1 21 0 354 64 0 0 chr18 30125572 30125619 -56551929 + HSMAR2 DNA Mariner 2 48 -1254 1636 187 43 3 chr18 30125619 30125919 -56551629 + AluJb SINE Alu 1 312 0 3235 159 176 26 chr18 30126029 30126726 -56550822 - MSTA-int LTR MaLR -776 804 3 1950 158 117 8 chr18 30126728 30127114 -56550434 - MSTA LTR MaLR 0 428 1 1682 145 10 7 chr18 30127114 30127403 -56550145 + HSMAR2 DNA Mariner 1012 1301 -1 216 0 0 0 chr18 30127518 30127542 -56550006 + (A)n Simple_repeat Simple_repeat 1 24 0 377 364 37 6 chr18 30128044 30128206 -56549342 + L2 LINE L2 3104 3270 -2 30 0 0 0 chr18 30128515 30128545 -56549003 + AT_rich Low_complexity Low_complexity 1 30 0 379 371 20 0 chr18 30129049 30129200 -56548348 + MIR3 SINE MIR 38 191 -17 354 107 0 0 chr18 30129352 30129408 -56548140 + (TC)n Simple_repeat Simple_repeat 1 56 0 200 328 30 0 chr18 30129787 30129854 -56547694 + MIR SINE MIR 68 136 -126 250 298 36 150 chr18 30130212 30130718 -56546830 - L2 LINE L2 0 3272 2825 5736 142 5 15 chr18 30130783 30132008 -56545540 - L1PB2 LINE L1 -36 6115 4898 2718 211 10 0 chr18 30132018 30132640 -56544908 + L1PB2 LINE L1 4280 4907 -1239 382 371 53 20 chr18 30132862 30133164 -56544384 - L2 LINE L2 -976 2338 2027 767 262 75 30 chr18 30133670 30133961 -56543587 - L1MC4 LINE L1 -758 7284 6890 285 29 0 0 chr18 30133961 30133995 -56543553 + (CA)n Simple_repeat Simple_repeat 2 35 0 767 262 75 30 chr18 30133995 30134140 -56543408 - L1MC4 LINE L1 -1152 6890 6753 25 51 0 0 chr18 30134353 30134392 -56543156 + AT_rich Low_complexity Low_complexity 1 39 0 417 329 100 25 chr18 30134618 30135019 -56542529 + L1PA12 LINE L1 1667 2097 -5484 16290 208 21 29 chr18 30135030 30138375 -56539173 + L1PA15 LINE L1 1544 4832 -2771 1972 109 0 11 chr18 30138375 30138651 -56538897 + AluY SINE Alu 35 307 -4 16290 208 21 29 chr18 30138651 30141399 -56536149 + L1PA15 LINE L1 4832 7602 -1 212 200 0 40 chr18 30142282 30142332 -56535216 - MIR SINE MIR -61 201 154 297 287 43 21 chr18 30143282 30143376 -56534172 + L2 LINE L2 3218 3313 0 594 207 129 0 chr18 30143858 30143998 -56533550 + AluJb SINE Alu 142 299 -13 445 356 27 45 chr18 30144285 30144577 -56532971 - L2 LINE L2 -3 3269 2983 21 71 0 0 chr18 30144755 30144797 -56532751 + AT_rich Low_complexity Low_complexity 1 42 0 1673 226 8 22 chr18 30144873 30145231 -56532317 + MLT1A1 LTR MaLR 11 363 -2 598 289 51 42 chr18 30146046 30146357 -56531191 - L3 LINE CR1 -17 1560 1247 1643 183 103 9 chr18 30146768 30147118 -56530430 + MSTD LTR MaLR 14 396 0 190 357 0 0 chr18 30147127 30147183 -56530365 + MIR SINE MIR 6 61 -201 2464 64 0 3 chr18 30147636 30147948 -56529600 - AluY SINE Alu 0 311 1 279 0 0 0 chr18 30148458 30148489 -56529059 + (CA)n Simple_repeat Simple_repeat 2 32 0 330 285 20 26 chr18 30149551 30149671 -56527877 - Charlie4 DNA MER1_type -4 1957 1837 2014 149 27 27 chr18 30149671 30150046 -56527502 + THE1C LTR MaLR 1 375 0 330 285 20 26 chr18 30150046 30150076 -56527472 - Charlie4 DNA MER1_type -124 1837 1808 1787 128 41 82 chr18 30152890 30153281 -56524267 - THE1C LTR MaLR 0 375 1 750 267 74 0 chr18 30153327 30153544 -56524004 + MLT1G LTR MaLR 358 590 0 192 77 0 0 chr18 30154408 30154434 -56523114 + (T)n Simple_repeat Simple_repeat 1 26 0 22 0 0 0 chr18 30155058 30155080 -56522468 + AT_rich Low_complexity Low_complexity 1 22 0 463 278 184 37 chr18 30155966 30156075 -56521473 + L1ME4a LINE L1 5607 5699 -422 2251 120 0 0 chr18 30156075 30156383 -56521165 + AluSq SINE Alu 2 309 -4 463 278 184 37 chr18 30156383 30156680 -56520868 + L1ME4a LINE L1 5699 6073 -48 793 296 49 83 chr18 30157073 30157361 -56520187 + L2 LINE L2 2576 2872 -441 1695 122 115 3 chr18 30157361 30157665 -56519883 - L1PB3 LINE L1 -3 6151 5814 2894 86 68 2 chr18 30157665 30158100 -56519448 - L1PA2 LINE L1 0 6155 5686 793 296 49 83 chr18 30158100 30158573 -56518975 + L2 LINE L2 2870 3308 -5 707 310 76 35 chr18 30158865 30159181 -56518367 + MLT1J2 LTR MaLR 101 429 -21 345 284 43 21 chr18 30160795 30160936 -56516612 - MIR SINE MIR -110 152 9 21 36 0 0 chr18 30162540 30162568 -56514980 + AT_rich Low_complexity Low_complexity 1 28 0 554 200 21 28 chr18 30165671 30165816 -56511732 - L1ME2 LINE L1 -2 6162 6019 496 208 0 0 chr18 30165824 30165925 -56511623 - L1ME2 LINE L1 -184 5980 5880 339 291 18 42 chr18 30165923 30166088 -56511460 - L1 LINE L1 -2118 4028 3868 * 27 49 0 0 chr18 30166089 30166130 -56511418 + AT_rich Low_complexity Low_complexity 1 41 0 5920 44 0 3 chr18 30166130 30166858 -56510690 - L1PA5 LINE L1 0 6154 5429 3919 61 2 4 chr18 30166858 30167383 -56510165 + L1P LINE L1 3138 3661 -2485 905 256 46 29 chr18 30167386 30167734 -56509814 - L1 LINE L1 -2303 3843 3490 550 292 62 25 chr18 30167757 30168192 -56509356 - L1 LINE L1 -2824 3322 2872 * 4196 220 41 9 chr18 30168191 30169917 -56507631 - L1MB8 LINE L1 -1 6246 4427 289 194 136 0 chr18 30169894 30169997 -56507551 - L1MB8 LINE L1 -3227 2988 2872 * 1101 258 114 34 chr18 30169997 30170876 -56506672 - L1MB8 LINE L1 -3558 2657 1761 717 299 25 11 chr18 30170878 30171233 -56506315 - L1 LINE L1 -3463 2683 2324 853 253 31 93 chr18 30171233 30171307 -56506241 + MLT2C2 LTR ERVL 1 78 -386 1860 146 0 4 chr18 30171307 30171582 -56505966 + AluSx SINE Alu 1 274 -38 222 37 0 0 chr18 30171584 30171611 -56505937 + (TC)n Simple_repeat Simple_repeat 2 28 0 * 257 19 19 57 chr18 30171610 30171663 -56505885 + (TA)n Simple_repeat Simple_repeat 1 51 0 853 253 31 93 chr18 30171611 30172036 -56505512 + MLT2C2 LTR ERVL 79 423 -41 351 198 0 0 chr18 30172036 30172115 -56505433 + (CA)n Simple_repeat Simple_repeat 1 82 -4 2076 110 34 52 chr18 30172115 30172497 -56505051 - THE1C LTR MaLR 0 375 1 351 198 0 0 chr18 30172497 30172503 -56505045 + (CA)n Simple_repeat Simple_repeat 81 86 0 484 308 0 0 chr18 30173171 30173301 -56504247 - MER58A DNA MER1_type 0 224 95 5844 57 44 1 chr18 30173329 30174098 -56503450 - L1PA8 LINE L1 -5 6167 5366 365 235 71 0 chr18 30174113 30174198 -56503350 - MER58A DNA MER1_type -16 91 1 335 355 61 30 chr18 30174722 30175024 -56502524 + L1MC/D LINE L1 5354 5664 -508 625 313 39 91 chr18 30175227 30175511 -56502037 + MLT1I LTR MaLR 63 325 -84 1688 205 0 0 chr18 30175511 30175799 -56501749 - AluJb SINE Alu -24 288 1 625 313 39 91 chr18 30175799 30175878 -56501670 + MLT1I LTR MaLR 325 407 -2 21 0 0 0 chr18 30176007 30176028 -56501520 + AT_rich Low_complexity Low_complexity 1 21 0 202 341 93 33 chr18 30176349 30176531 -56501017 - L2 LINE L2 -1303 2011 1819 23 0 0 0 chr18 30177350 30177373 -56500175 + AT_rich Low_complexity Low_complexity 1 23 0 383 232 45 9 chr18 30177584 30177696 -56499852 - MER103 DNA DNA -50 116 1 253 266 63 63 chr18 30177853 30178011 -56499537 - MIR SINE MIR -58 204 47 21 36 0 0 chr18 30178431 30178459 -56499089 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr18 30178914 30178936 -56498612 + AT_rich Low_complexity Low_complexity 1 22 0 272 278 116 44 chr18 30179179 30179496 -56498052 + MLT1J LTR MaLR 100 481 -30 301 331 99 0 chr18 30179713 30179834 -56497714 + MIR SINE MIR 61 193 -69 186 43 0 0 chr18 30180692 30180715 -56496833 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 10630 166 37 12 chr18 30182092 30185063 -56492485 + L1MA6 LINE L1 3260 6295 -5 1720 167 7 3 chr18 30185162 30185490 -56492058 + AluSx SINE Alu 1 329 0 2064 129 10 0 chr18 30187106 30187415 -56490133 - AluSx SINE Alu 0 312 1 26 0 0 0 chr18 30187509 30187535 -56490013 + AT_rich Low_complexity Low_complexity 1 26 0 605 292 106 22 chr18 30188269 30188495 -56489053 - MIR SINE MIR -1 261 17 23 33 0 0 chr18 30189247 30189277 -56488271 + AT_rich Low_complexity Low_complexity 1 30 0 269 238 137 36 chr18 30189930 30190098 -56487450 - L1ME LINE L1 -721 5441 5257 617 316 76 30 chr18 30190760 30191196 -56486352 + LTR16A LTR ERVL 2 450 0 216 347 32 0 chr18 30191685 30191780 -56485768 - L2 LINE L2 -208 3064 2967 248 260 30 50 chr18 30191942 30192042 -56485506 - L2 LINE L2 -530 2784 2687 236 273 13 0 chr18 30192242 30192319 -56485229 - LTR33 LTR ERVL -103 418 341 28 29 0 0 chr18 30192367 30192402 -56485146 + AT_rich Low_complexity Low_complexity 1 35 0 225 284 59 10 chr18 30192571 30192673 -56484875 - LTR33 LTR ERVL -412 109 3 417 156 0 0 chr18 30192719 30192796 -56484752 + CT-rich Low_complexity Low_complexity 1 77 0 194 157 0 20 chr18 30192864 30192915 -56484633 + CT-rich Low_complexity Low_complexity 2 51 0 636 136 32 19 chr18 30192981 30193135 -56484413 + CT-rich Low_complexity Low_complexity 3 158 0 317 251 191 44 chr18 30193195 30193446 -56484102 - L1ME LINE L1 -5254 816 529 234 0 0 0 chr18 30193712 30193738 -56483810 + (TG)n Simple_repeat Simple_repeat 2 27 0 2228 96 0 3 chr18 30194102 30194394 -56483154 + AluSc SINE Alu 1 291 -18 24 41 0 20 chr18 30194977 30195002 -56482546 + AT_rich Low_complexity Low_complexity 1 26 -22 2218 96 17 0 chr18 30195002 30195295 -56482253 + AluY SINE Alu 1 298 -13 24 41 0 20 chr18 30195295 30195318 -56482230 + AT_rich Low_complexity Low_complexity 26 48 0 2134 82 55 7 chr18 30195802 30196095 -56481453 - AluSg1 SINE Alu -2 307 1 1022 310 126 31 chr18 30197394 30198450 -56479098 + Charlie8 DNA MER1_type 61 1216 -1201 2881 207 11 71 chr18 30198484 30199219 -56478329 + LTR8 LTR ERV1 1 691 0 972 263 23 6 chr18 30199219 30199527 -56478021 + HUERS-P1 LTR ERV1 1 387 -5876 15756 191 63 93 chr18 30199860 30204892 -56472656 + HUERS-P1 LTR ERV1 662 4502 -434 1276 154 142 48 chr18 30204912 30205242 -56472306 + HUERS-P1 LTR ERV1 5914 6274 -57 1196 296 13 0 chr18 30205323 30205634 -56471914 + HUERS-P1 LTR ERV1 5946 6260 -3 2381 229 12 76 chr18 30205637 30206310 -56471238 + LTR8 LTR ERV1 1 630 -61 952 294 121 58 chr18 30206346 30206734 -56470814 + Charlie8 DNA MER1_type 1442 1804 -613 2618 105 11 5 chr18 30206734 30207107 -56470441 + THE1C LTR MaLR 1 375 0 952 294 121 58 chr18 30207107 30207633 -56469915 + Charlie8 DNA MER1_type 1804 2414 -3 217 206 59 0 chr18 30207684 30207752 -56469796 + (TTTAA)n Simple_repeat Simple_repeat 5 76 0 260 262 128 43 chr18 30207791 30207932 -56469616 - MLT1H LTR MaLR -7 542 390 1146 189 42 52 chr18 30208458 30208616 -56468932 + L1MA9 LINE L1 5972 6127 -185 1992 132 14 0 chr18 30208616 30208912 -56468636 - AluSx SINE Alu -12 300 1 1146 189 42 52 chr18 30208912 30209059 -56468489 + L1MA9 LINE L1 6127 6274 -38 1124 247 50 23 chr18 30209064 30209567 -56467981 + L1ME LINE L1 5187 5709 -455 1546 288 59 49 chr18 30209729 30210480 -56467068 + MER20B DNA MER1_type 7 764 -19 30 27 0 0 chr18 30210542 30210579 -56466969 + AT_rich Low_complexity Low_complexity 1 37 0 320 253 68 0 chr18 30211362 30211477 -56466071 - MIR SINE MIR -41 167 40 261 98 0 0 chr18 30211809 30211850 -56465698 + (TATG)n Simple_repeat Simple_repeat 2 42 0 229 155 69 0 chr18 30211863 30211921 -56465627 - L1MC4 LINE L1 -1337 6705 6644 225 250 0 0 chr18 30212168 30212220 -56465328 + (CAT)n Simple_repeat Simple_repeat 1 52 0 285 294 9 28 chr18 30212290 30212399 -56465149 + L2 LINE L2 3191 3297 -16 508 291 59 46 chr18 30213322 30213682 -56463866 - LTR31 LTR ERV1 0 601 255 280 287 103 48 chr18 30213838 30214110 -56463438 - MLT1I LTR MaLR -3 406 120 1950 204 3 0 chr18 30214347 30214695 -56462853 + MLT1A1 LTR MaLR 15 363 -2 1085 75 0 0 chr18 30214865 30214998 -56462550 + AluYa5 SINE Alu 3 135 -176 385 251 148 54 chr18 30215001 30215204 -56462344 + HAL1 LINE L1 872 1093 -1414 3150 304 62 43 chr18 30215208 30216080 -56461468 + L1MEc LINE L1 36 890 -1686 1449 194 42 32 chr18 30216080 30216389 -56461159 + AluJo SINE Alu 1 312 0 330 26 0 0 chr18 30216397 30216436 -56461112 + (CA)n Simple_repeat Simple_repeat 2 40 0 3150 304 62 43 chr18 30216436 30217521 -56460027 + L1MEc LINE L1 896 1938 -638 450 255 56 6 chr18 30217616 30217777 -56459771 + HAL1 LINE L1 2031 2199 -308 1096 193 39 12 chr18 30217793 30218047 -56459501 + MER45B DNA AcHobo 779 1039 -1 22 0 0 0 chr18 30218121 30218143 -56459405 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr18 30219553 30219593 -56457955 + AT_rich Low_complexity Low_complexity 1 40 0 1864 154 45 21 chr18 30220537 30220601 -56456947 - MER1B DNA MER1_type -2373 339 278 366 23 0 0 chr18 30220601 30220644 -56456904 + (TG)n Simple_repeat Simple_repeat 2 44 0 1864 154 45 21 chr18 30220644 30220910 -56456638 - MER1B DNA MER1_type -2434 278 1 570 277 170 0 chr18 30221915 30222139 -56455409 - MIR SINE MIR 0 262 1 22 35 0 0 chr18 30224034 30224063 -56453485 + AT_rich Low_complexity Low_complexity 1 29 0 2175 107 3 31 chr18 30224647 30224964 -56452584 + AluSg1 SINE Alu 1 308 -1 222 37 0 0 chr18 30225091 30225118 -56452430 + (A)n Simple_repeat Simple_repeat 1 27 0 337 296 105 20 chr18 30225583 30225735 -56451813 - L1MEc LINE L1 -4604 2518 2354 1158 298 54 11 chr18 30225775 30226222 -56451326 - L1MEc LINE L1 -5157 1266 801 893 296 106 31 chr18 30226305 30227344 -56450204 + L1MEc LINE L1 2910 4026 -2189 329 190 38 38 chr18 30227368 30227526 -56450022 + (TAAA)n Simple_repeat Simple_repeat 1 158 0 279 289 72 82 chr18 30227540 30227734 -56449814 + L1MEc LINE L1 4096 4287 -1928 * 1740 228 24 17 chr18 30227724 30228146 -56449402 + L1MC3 LINE L1 7155 7579 -206 737 180 46 21 chr18 30228146 30228258 -56449290 + L1MC2 LINE L1 6131 6252 -92 1328 81 19 128 chr18 30228258 30228516 -56449032 + MER30 DNA MER1_type 1 230 0 737 180 46 21 chr18 30228516 30228597 -56448951 + L1MC2 LINE L1 6252 6329 -15 1766 167 0 10 chr18 30228597 30228891 -56448657 + AluSx SINE Alu 1 291 -21 5673 16 0 1 chr18 30230176 30230977 -56446571 + L1PA2 LINE L1 5112 5911 -244 26 30 0 0 chr18 30231130 30231163 -56446385 + AT_rich Low_complexity Low_complexity 1 33 0 208 186 23 0 chr18 30231743 30231786 -56445762 + CT-rich Low_complexity Low_complexity 4 47 0 1377 171 103 8 chr18 30231901 30232153 -56445395 + AluJb SINE Alu 15 290 -22 4070 158 18 49 chr18 30232155 30232913 -56444635 - L1MA7 LINE L1 -3 6288 5559 1842 176 7 3 chr18 30232913 30233220 -56444328 - AluSx SINE Alu -4 308 1 4070 158 18 49 chr18 30233220 30233340 -56444208 - L1MA7 LINE L1 -732 5559 5437 331 318 104 21 chr18 30234172 30234364 -56443184 + MIR SINE MIR 49 256 -6 1566 152 11 30 chr18 30235398 30235668 -56441880 + AluSx SINE Alu 39 303 -9 260 277 12 0 chr18 30236064 30236147 -56441401 - L1MEd LINE L1 -6033 86 3 27 0 0 0 chr18 30236568 30236595 -56440953 + AT_rich Low_complexity Low_complexity 1 27 0 1696 282 80 12 chr18 30237037 30237625 -56439923 + L1ME2 LINE L1 38 665 -5731 1288 229 28 11 chr18 30237622 30237976 -56439572 + L1ME2 LINE L1 3763 4122 -2093 * 309 288 71 35 chr18 30237996 30238194 -56439354 + L1ME2 LINE L1 4231 4435 -1780 2759 225 31 4 chr18 30238210 30238757 -56438791 + MER68 LTR ERV1 1 562 0 762 264 57 28 chr18 30238758 30239076 -56438472 + L1ME2 LINE L1 4448 4774 -1441 638 259 82 5 chr18 30239101 30239321 -56438227 + L1ME2 LINE L1 4852 5088 -1127 1539 187 92 14 chr18 30239321 30239669 -56437879 - THE1C LTR MaLR 0 375 1 9469 134 34 12 chr18 30239669 30241214 -56436334 - THE1C-int LTR MaLR 0 1580 1 1793 157 70 14 chr18 30241221 30241566 -56435982 - THE1C LTR MaLR -11 364 1 9400 161 13 13 chr18 30241590 30244079 -56433469 + L1PA13 LINE L1 3663 6163 0 2469 253 58 27 chr18 30244079 30244148 -56433400 + L1ME2 LINE L1 5116 5181 -1222 1970 89 46 7 chr18 30244148 30244429 -56433119 + AluY SINE Alu 1 292 -19 2469 253 58 27 chr18 30244429 30245403 -56432145 + L1ME2 LINE L1 5181 6362 -41 1995 89 7 34 chr18 30245526 30245817 -56431731 + AluSq SINE Alu 1 316 0 235 91 0 0 chr18 30245817 30245850 -56431698 + (TAA)n Simple_repeat Simple_repeat 2 180 0 336 375 37 45 chr18 30246078 30246430 -56431118 + L3 LINE CR1 73 421 -1156 28 48 0 0 chr18 30246475 30246517 -56431031 + AT_rich Low_complexity Low_complexity 1 42 0 22 0 0 0 chr18 30246784 30246806 -56430742 + AT_rich Low_complexity Low_complexity 1 22 0 2246 97 7 3 chr18 30248364 30248674 -56428874 + AluSq SINE Alu 3 313 0 1364 249 40 56 chr18 30249114 30249632 -56427916 - L1ME2 LINE L1 -22 6142 5633 1266 290 191 12 chr18 30249632 30250283 -56427265 + LTR41 LTR ERVL 1 767 -6 976 233 65 18 chr18 30250286 30250766 -56426782 - L1ME2 LINE L1 -527 5637 5126 336 313 8 16 chr18 30250800 30250928 -56426620 - L1ME2 LINE L1 -1144 5002 4876 240 289 70 23 chr18 30250937 30251065 -56426483 - L1ME2 LINE L1 -1978 4168 4035 3092 244 85 16 chr18 30251082 30252332 -56425216 - L1ME1 LINE L1 -5 6161 4817 21 36 0 0 chr18 30252474 30252502 -56425046 + AT_rich Low_complexity Low_complexity 1 28 0 651 319 94 18 chr18 30252527 30253482 -56424066 + L1ME3 LINE L1 4131 5158 -988 875 293 79 29 chr18 30253662 30254255 -56423293 + L1ME3 LINE L1 5329 5951 -211 3684 180 43 96 chr18 30255463 30256555 -56420993 + L1MA9 LINE L1 5127 6275 -37 2080 87 25 0 chr18 30256555 30256841 -56420707 + AluY SINE Alu 1 293 -18 3684 180 43 96 chr18 30256841 30256864 -56420684 + L1MA9 LINE L1 6275 6155 -157 201 74 0 0 chr18 30256864 30256891 -56420657 + (CA)n Simple_repeat Simple_repeat 2 28 0 3684 180 43 96 chr18 30256891 30257041 -56420507 + L1MA9 LINE L1 6154 6310 -2 554 245 113 6 chr18 30257405 30257564 -56419984 + MER45C DNA AcHobo 1 176 -777 242 348 156 35 chr18 30257657 30257939 -56419609 + MER45C DNA AcHobo 309 624 -329 309 170 19 0 chr18 30257943 30257996 -56419552 + MER45C DNA AcHobo 900 953 0 245 287 128 0 chr18 30258189 30258283 -56419265 - MIR SINE MIR -84 178 73 187 342 79 33 chr18 30258451 30258603 -56418945 - L2 LINE L2 -467 2847 2689 893 218 11 5 chr18 30259413 30259601 -56417947 + MER5A DNA MER1_type 1 189 0 263 271 0 17 chr18 30261245 30261304 -56416244 - L3 LINE CR1 -11 1566 1509 313 126 69 11 chr18 30261565 30261652 -56415896 + CT-rich Low_complexity Low_complexity 2 93 0 466 29 29 0 chr18 30262382 30262450 -56415098 + (TAGA)n Simple_repeat Simple_repeat 4 73 0 3017 268 109 31 chr18 30263185 30264564 -56412984 + L1MEc LINE L1 37 1523 -4873 321 382 0 7 chr18 30264715 30264851 -56412697 + MIR SINE MIR 128 262 0 306 36 73 0 chr18 30265594 30265649 -56411899 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 280 330 12 12 chr18 30265691 30265864 -56411684 + (TA)n Simple_repeat Simple_repeat 1 173 0 36 40 0 0 chr18 30267361 30267411 -56410137 + AT_rich Low_complexity Low_complexity 1 50 0 27 29 0 0 chr18 30267682 30267716 -56409832 + AT_rich Low_complexity Low_complexity 1 34 0 26 74 0 0 chr18 30267874 30267928 -56409620 + AT_rich Low_complexity Low_complexity 1 54 0 4832 47 2 5 chr18 30267988 30268651 -56408897 + L1P2 LINE L1 4781 5443 -711 772 243 5 28 chr18 30268753 30268971 -56408577 + L1MEc LINE L1 2445 2657 -3558 286 196 147 0 chr18 30268971 30269073 -56408475 + L1MEc LINE L1 2872 2988 -3227 * 4128 222 58 6 chr18 30269050 30270777 -56406771 + L1MB8 LINE L1 4427 6246 -1 552 292 62 25 chr18 30270776 30271211 -56406337 + L1MEc LINE L1 2941 3391 -2824 * 905 256 46 29 chr18 30271234 30271582 -56405966 + L1MEc LINE L1 3559 3912 -2303 3895 61 4 4 chr18 30271585 30272110 -56405438 - L1P LINE L1 -2485 3661 3137 5886 47 0 0 chr18 30272110 30272834 -56404714 + L1PA5 LINE L1 5429 6153 -1 183 129 0 0 chr18 30273286 30273317 -56404231 + (T)n Simple_repeat Simple_repeat 1 31 0 1349 205 3 34 chr18 30274246 30274544 -56403004 - AluJo SINE Alu -8 304 16 715 208 66 8 chr18 30274545 30274868 -56402680 - L1MD1 LINE L1 -189 6447 5943 609 300 80 16 chr18 30274869 30275261 -56402287 - L1MD1 LINE L1 -863 5677 5243 2181 172 37 28 chr18 30275298 30275733 -56401815 + Tigger2 DNA MER2_type 2280 2718 0 1294 263 91 10 chr18 30275810 30276296 -56401252 - L1MD1 LINE L1 -1576 4964 4440 323 303 43 40 chr18 30276295 30276521 -56401027 - L1MD1 LINE L1 -2576 3964 3734 * 2200 74 3 7 chr18 30276521 30276827 -56400721 - AluY SINE Alu 0 305 1 323 303 43 40 chr18 30276827 30276876 -56400672 - L1MD1 LINE L1 -2806 3734 3687 1250 306 43 10 chr18 30276896 30277294 -56400254 - L1MD1 LINE L1 -5446 1094 684 920 309 99 62 chr18 30277528 30278185 -56399363 + L1M3d LINE L1 11 691 -5200 1402 264 101 5 chr18 30278303 30278867 -56398681 + L1MC/D LINE L1 1801 2418 -4189 1393 171 30 33 chr18 30278872 30279177 -56398371 + L1MA10 LINE L1 6028 6331 -3 314 320 120 13 chr18 30279727 30279877 -56397671 + MIR SINE MIR 85 250 -12 1379 268 66 5 chr18 30280323 30280910 -56396638 + L1MC/D LINE L1 2347 2972 -3454 235 194 60 0 chr18 30281122 30281189 -56396359 + L1MC/D LINE L1 5513 5583 -843 6903 64 2 2 chr18 30281211 30282220 -56395328 + L1PA7 LINE L1 5145 6153 -1 220 286 24 36 chr18 30282225 30282309 -56395239 + MIR SINE MIR 180 262 0 489 220 47 13 chr18 30282347 30282497 -56395051 + L1MC/D LINE L1 5627 5781 -2284 427 195 20 174 chr18 30282498 30282712 -56394836 + L1MA10 LINE L1 5952 6291 -43 2262 278 72 16 chr18 30283062 30284222 -56393326 - L1M4 LINE L1 -2215 3931 2708 876 248 23 23 chr18 30284850 30285068 -56392480 - MER20 DNA MER1_type 0 219 2 474 279 19 31 chr18 30285251 30285412 -56392136 + MER5B DNA MER1_type 2 160 -18 707 284 99 23 chr18 30286074 30286458 -56391090 - LTR16A1 LTR ERVL -42 415 3 921 195 6 0 chr18 30286714 30286888 -56390660 + AluJb SINE Alu 137 311 -1 777 239 42 114 chr18 30286980 30287340 -56390208 - L2 LINE L2 0 3313 2980 31 58 0 0 chr18 30287668 30287720 -56389828 + AT_rich Low_complexity Low_complexity 1 52 0 25 31 0 0 chr18 30289116 30289148 -56388400 + AT_rich Low_complexity Low_complexity 1 32 0 2476 62 0 3 chr18 30289197 30289504 -56388044 - AluY SINE Alu -5 306 1 360 180 0 50 chr18 30289630 30289714 -56387834 - AluJ/FRAM SINE Alu -7 295 226 198 326 35 12 chr18 30289892 30289978 -56387570 - L2 LINE L2 -246 3026 2939 316 288 12 88 chr18 30290859 30291029 -56386519 + MER5A DNA MER1_type 2 158 -31 606 299 33 66 chr18 30291272 30291312 -56386236 - MER115 DNA AcHobo -41 652 612 2758 71 98 0 chr18 30291312 30291720 -56385828 - LTR7 LTR ERV1 -2 448 1 606 299 33 66 chr18 30291720 30291950 -56385598 - MER115 DNA AcHobo -81 612 391 795 229 0 0 chr18 30292368 30292521 -56385027 - FRAM SINE Alu -13 153 1 397 316 53 0 chr18 30292544 30292658 -56384890 - L2 LINE L2 -1 3312 3193 186 300 50 20 chr18 30292659 30292759 -56384789 - L3 LINE CR1 -73 1504 1402 2289 55 14 0 chr18 30293055 30293344 -56384204 + AluY SINE Alu 1 293 -18 3986 84 15 2 chr18 30293559 30294105 -56383443 - MER41A LTR ERV1 0 554 2 1225 219 67 79 chr18 30294149 30294565 -56382983 - MER110 LTR ERV1 -2 489 79 247 254 51 0 chr18 30294622 30294681 -56382867 - MER110 LTR ERV1 -429 62 1 22 70 0 0 chr18 30294868 30294911 -56382637 + AT_rich Low_complexity Low_complexity 1 43 0 1180 224 108 77 chr18 30295869 30296404 -56381144 + MER92C LTR ERV1 1 552 -2 221 340 10 0 chr18 30296377 30296486 -56381062 + CT-rich Low_complexity Low_complexity 1 110 0 197 159 23 0 chr18 30296981 30297025 -56380523 + (CA)n Simple_repeat Simple_repeat 2 46 0 2782 178 30 84 chr18 30298612 30298810 -56378738 - MER4D LTR ERV1 0 903 696 2183 176 13 2 chr18 30298810 30299208 -56378340 + MER57A LTR ERV1 2 403 0 2782 178 30 84 chr18 30299208 30299713 -56377835 - MER4D LTR ERV1 -207 696 238 216 0 0 0 chr18 30299746 30299770 -56377778 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1415 208 40 3 chr18 30299780 30300078 -56377470 - MER49 LTR ERV1 -614 309 1 3621 161 14 3 chr18 30300244 30300872 -56376676 - MER41B LTR ERV1 0 635 1 22 56 0 0 chr18 30301012 30301048 -56376500 + AT_rich Low_complexity Low_complexity 1 36 0 309 276 77 8 chr18 30303451 30303623 -56373925 - LTR16C LTR ERVL -1 490 270 22 35 0 0 chr18 30304404 30304433 -56373115 + AT_rich Low_complexity Low_complexity 1 29 0 214 422 37 0 chr18 30304703 30304812 -56372736 - MIR SINE MIR -64 144 32 260 384 61 37 chr18 30304910 30305204 -56372344 + LTR67 LTR ERVL 4 304 -253 384 257 14 57 chr18 30305239 30305379 -56372169 + MIR SINE MIR 128 261 -1 278 329 109 24 chr18 30305421 30305631 -56371917 + L2 LINE L2 1728 1955 -1359 801 234 5 33 chr18 30305644 30305828 -56371720 + AluJo SINE Alu 126 304 -8 268 311 11 22 chr18 30305976 30306066 -56371482 + L2 LINE L2 3218 3306 -7 189 0 0 0 chr18 30306114 30306135 -56371413 + (TG)n Simple_repeat Simple_repeat 2 22 0 307 341 64 12 chr18 30308518 30308691 -56368857 - MER5A DNA MER1_type 0 189 8 1764 199 9 3 chr18 30311144 30311486 -56366062 - L1MCa LINE L1 -6081 345 2 252 233 39 48 chr18 30311576 30311679 -56365869 + HsTC2 DNA Tc2 2 103 -1795 254 131 33 0 chr18 30311939 30312000 -56365548 + (TCTCTG)n Simple_repeat Simple_repeat 4 66 0 335 199 120 9 chr18 30312049 30312195 -56365353 + HsTC2 DNA Tc2 1743 1897 -1 456 233 189 22 chr18 30312197 30312377 -56365171 - MER63A DNA MER1_type 0 210 1 231 261 22 65 chr18 30313235 30313327 -56364221 + L2 LINE L2 3219 3306 -7 180 176 0 0 chr18 30313383 30313417 -56364131 + (TA)n Simple_repeat Simple_repeat 1 34 0 725 460 119 28 chr18 30314469 30314754 -56362794 - MER7A DNA MER2_type -36 310 2 230 238 0 0 chr18 30316616 30316658 -56360890 + (CA)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr18 30317867 30317892 -56359656 + AT_rich Low_complexity Low_complexity 1 25 0 212 220 20 0 chr18 30317975 30318025 -56359523 + (TA)n Simple_repeat Simple_repeat 1 51 0 229 262 0 0 chr18 30318025 30318086 -56359462 - L1MC4 LINE L1 -1337 6705 6645 182 146 49 73 chr18 30318508 30318549 -56358999 - MIR SINE MIR -6 256 217 225 0 0 0 chr18 30319339 30319364 -56358184 + (TTTTTG)n Simple_repeat Simple_repeat 6 30 0 839 158 0 0 chr18 30320769 30320902 -56356646 + AluSq/x SINE Alu 1 133 -180 1079 154 0 0 chr18 30321060 30321238 -56356310 + AluSp SINE Alu 130 307 0 325 333 43 64 chr18 30321551 30321785 -56355763 + L3 LINE CR1 1202 1430 -147 192 328 0 0 chr18 30321895 30321956 -56355592 - MIR SINE MIR 0 262 202 23 54 0 0 chr18 30322392 30322429 -56355119 + AT_rich Low_complexity Low_complexity 1 37 0 21 57 0 0 chr18 30322555 30322590 -56354958 + AT_rich Low_complexity Low_complexity 1 35 0 307 295 62 8 chr18 30323733 30323862 -56353686 + L1M4 LINE L1 3985 4120 -2026 507 273 163 55 chr18 30324035 30324697 -56352851 + L1M4 LINE L1 4356 5130 -1016 1694 180 7 3 chr18 30324697 30324991 -56352557 - AluSx SINE Alu -17 295 1 507 273 163 55 chr18 30324991 30325171 -56352377 + L1M4 LINE L1 5130 5289 -857 1453 284 62 8 chr18 30325250 30325736 -56351812 + LTR26 LTR ERV1 92 603 0 4826 157 57 32 chr18 30327425 30328359 -56349189 - L1MC1 LINE L1 -5 6328 5372 31 44 0 0 chr18 30328419 30328464 -56349084 + AT_rich Low_complexity Low_complexity 1 45 0 223 279 147 23 chr18 30328555 30328684 -56348864 + MIR SINE MIR 53 197 -65 247 260 40 0 chr18 30328723 30328823 -56348725 + T-rich Low_complexity Low_complexity 2 105 0 1003 206 14 5 chr18 30329872 30330095 -56347453 - L1MC3 LINE L1 -11 7774 7550 23 33 0 0 chr18 30330307 30330337 -56347211 + AT_rich Low_complexity Low_complexity 1 30 0 2602 101 3 6 chr18 30330552 30330917 -56346631 - THE1B LTR MaLR 0 364 1 31 0 0 0 chr18 30331334 30331365 -56346183 + AT_rich Low_complexity Low_complexity 1 31 0 591 229 53 53 chr18 30331998 30332168 -56345380 + L1ME1 LINE L1 32 201 -6195 3816 56 8 0 chr18 30332275 30332761 -56344787 - L1P3 LINE L1 -333 5821 5332 3670 286 70 18 chr18 30332773 30334918 -56342630 + L1ME1 LINE L1 235 2647 -3568 9360 219 30 16 chr18 30334918 30336490 -56341058 - L1P LINE L1 -1730 4416 2809 6014 103 24 1 chr18 30336490 30338026 -56339522 - L1PA11 LINE L1 -3 6171 4597 9360 219 30 16 chr18 30338026 30338512 -56339036 - L1P LINE L1 -3337 2809 2331 2869 144 2 7 chr18 30338508 30338965 -56338583 + L1PA13 LINE L1 5686 6140 -23 * 466 245 49 0 chr18 30338966 30339109 -56338439 + L1ME1 LINE L1 4178 4327 -1888 312 212 0 0 chr18 30339277 30339343 -56338205 + L1ME1 LINE L1 4364 4429 -1786 451 211 74 0 chr18 30339365 30339460 -56338088 + U6 snRNA snRNA 2 103 -4 1338 162 4 4 chr18 30339474 30339721 -56337827 + L1MB3 LINE L1 5921 6167 -16 21984 96 24 2 chr18 30339728 30343752 -56333796 - L1PA7 LINE L1 -16 6138 2028 2507 225 51 52 chr18 30343840 30344221 -56333327 + L1ME1 LINE L1 4743 5123 -1112 620 237 106 15 chr18 30344221 30344419 -56333129 - MER20 DNA MER1_type 0 219 4 2507 225 51 52 chr18 30344419 30344728 -56332820 + L1ME1 LINE L1 5123 5431 -804 334 176 0 14 chr18 30344728 30344802 -56332746 + L1MA8 LINE L1 6208 6280 -11 2507 225 51 52 chr18 30344802 30344830 -56332718 + L1ME1 LINE L1 5431 5458 -777 2019 199 49 5 chr18 30344830 30345238 -56332310 - MSTB LTR MaLR 0 426 1 2507 225 51 52 chr18 30345238 30345955 -56331593 + L1ME1 LINE L1 5458 6165 -70 399 203 301 0 chr18 30345875 30345998 -56331550 + L1MA10 LINE L1 6244 6403 0 * 880 329 39 12 chr18 30347341 30347742 -56329806 - LTR16A1 LTR ERVL -3 481 66 268 316 124 43 chr18 30348277 30348454 -56329094 + MER5B DNA MER1_type 1 178 0 23 0 0 0 chr18 30349197 30349220 -56328328 + AT_rich Low_complexity Low_complexity 1 23 0 802 114 0 8 chr18 30349798 30349930 -56327618 + L1PB1 LINE L1 6021 6151 0 25 31 0 0 chr18 30350660 30350692 -56326856 + AT_rich Low_complexity Low_complexity 1 32 0 1266 180 149 28 chr18 30351598 30351920 -56325628 + MLT1A1 LTR MaLR 5 365 0 231 253 0 48 chr18 30353036 30353119 -56324429 + CT-rich Low_complexity Low_complexity 3 81 0 396 341 76 29 chr18 30354596 30354872 -56322676 - L1ME3A LINE L1 -288 5882 5594 21 57 0 0 chr18 30355325 30355360 -56322188 + AT_rich Low_complexity Low_complexity 1 35 0 381 260 39 49 chr18 30356020 30356224 -56321324 - L1MEd LINE L1 -4910 1209 1008 22 35 0 0 chr18 30356496 30356525 -56321023 + AT_rich Low_complexity Low_complexity 1 29 0 294 29 0 0 chr18 30358054 30358089 -56319459 + (CA)n Simple_repeat Simple_repeat 2 36 0 237 33 0 0 chr18 30358992 30359022 -56318526 + (TG)n Simple_repeat Simple_repeat 1 30 0 555 297 46 0 chr18 30359445 30359620 -56317928 + MIR SINE MIR 3 185 -77 2231 98 0 3 chr18 30363387 30363683 -56313865 + AluSc SINE Alu 1 295 -14 1055 161 0 17 chr18 30363855 30364035 -56313513 + AluJo SINE Alu 1 177 -135 456 19 0 0 chr18 30364110 30364163 -56313385 + (TG)n Simple_repeat Simple_repeat 2 54 0 266 214 67 11 chr18 30364163 30364252 -56313296 + L1MC4 LINE L1 6614 6707 -1335 586 268 73 6 chr18 30364603 30364767 -56312781 - MER5B DNA MER1_type -1 177 3 210 402 18 18 chr18 30365691 30365803 -56311745 - MIR SINE MIR -128 134 23 1218 234 44 25 chr18 30365985 30366348 -56311200 - MLT1A2 LTR MaLR -3 371 2 28 0 0 0 chr18 30366934 30366962 -56310586 + AT_rich Low_complexity Low_complexity 1 28 0 185 32 0 65 chr18 30366962 30366993 -56310555 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 277 403 0 35 chr18 30367043 30367187 -56310361 - MIR3 SINE MIR -46 162 24 213 341 44 22 chr18 30367420 30367511 -56310037 + L2 LINE L2 2437 2529 -785 261 279 98 71 chr18 30367640 30367823 -56309725 + MIR SINE MIR 46 233 -29 274 306 153 28 chr18 30367833 30368049 -56309499 + MIR SINE MIR 20 262 0 24 53 0 0 chr18 30368418 30368456 -56309092 + AT_rich Low_complexity Low_complexity 1 38 0 1864 106 39 11 chr18 30368785 30369069 -56308479 - AluSx SINE Alu -20 292 1 244 316 88 29 chr18 30371823 30371994 -56305554 - MIR SINE MIR -70 192 12 1332 121 5 9 chr18 30373776 30373991 -56303557 + L1PB1 LINE L1 5935 6148 -3 21 82 0 0 chr18 30373991 30374040 -56303508 + AT_rich Low_complexity Low_complexity 1 49 0 240 195 0 0 chr18 30374110 30374151 -56303397 - MARNA DNA Mariner -376 210 170 186 319 99 0 chr18 30374983 30375074 -56302474 + MIR SINE MIR 146 245 -17 1070 184 25 128 chr18 30375872 30376279 -56301269 + MLT1A1 LTR MaLR 1 365 0 275 267 75 42 chr18 30376481 30376601 -56300947 - MER5B DNA MER1_type -1 177 54 373 271 73 13 chr18 30377771 30377922 -56299626 - MIR3 SINE MIR -2 206 47 851 259 123 55 chr18 30378570 30379084 -56298464 - MLT1H LTR MaLR 0 549 1 239 338 12 12 chr18 30379131 30379211 -56298337 - MIR SINE MIR -152 110 31 969 322 49 53 chr18 30379265 30379791 -56297757 + L2 LINE L2 2561 3086 -227 186 349 134 41 chr18 30379856 30380028 -56297520 + L2 LINE L2 3126 3313 0 182 288 118 88 chr18 30381308 30381478 -56296070 - L2 LINE L2 0 3313 3139 301 102 34 0 chr18 30381503 30381562 -56295986 + L1MB8 LINE L1 6118 6178 0 292 372 26 19 chr18 30381906 30382062 -56295486 + MER5A DNA MER1_type 2 158 -31 286 285 90 72 chr18 30382394 30382727 -56294821 + L1M4 LINE L1 80 720 -5702 1698 263 86 63 chr18 30382997 30383437 -56294111 + L1M4 LINE L1 814 1242 -5880 204 40 0 0 chr18 30383437 30383462 -56294086 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1698 263 86 63 chr18 30383462 30385059 -56292489 + L1M4 LINE L1 1242 3093 -4029 1685 190 44 65 chr18 30385081 30385748 -56291800 + L1M4 LINE L1 5650 6292 -677 473 65 0 0 chr18 30385746 30385808 -56291740 - L1P LINE L1 -1392 4754 4693 * 2449 86 14 3 chr18 30385883 30386234 -56291314 + L1PA13 LINE L1 5805 6159 -4 439 152 13 0 chr18 30386349 30386428 -56291120 - MADE1 DNA Mariner 0 80 1 1778 226 62 45 chr18 30388285 30388866 -56288682 - L1ME1 LINE L1 -20 6146 5556 2561 147 17 2 chr18 30389838 30390260 -56287288 + MSTA LTR MaLR 1 428 0 688 230 27 16 chr18 30391041 30391228 -56286320 + MER53 DNA DNA 1 189 0 1050 315 119 32 chr18 30391607 30392698 -56284850 - HAL1 LINE L1 -670 1837 652 206 344 22 11 chr18 30393235 30393325 -56284223 + MIR SINE MIR 25 115 -147 343 250 191 0 chr18 30393582 30393718 -56283830 + MIR SINE MIR 72 233 -29 617 294 46 5 chr18 30393800 30393994 -56283554 - MIR SINE MIR -60 202 1 1858 281 56 11 chr18 30396614 30397237 -56280311 - L1ME3A LINE L1 -57 6113 5463 368 269 65 27 chr18 30397258 30397444 -56280104 - L1ME3A LINE L1 -814 5332 5140 5257 145 23 3 chr18 30398158 30398503 -56279045 - L1PB4 LINE L1 -8 6148 5812 231 88 0 0 chr18 30398503 30398537 -56279011 + (TG)n Simple_repeat Simple_repeat 2 35 0 5257 145 23 3 chr18 30398537 30399194 -56278354 - L1PB4 LINE L1 -344 5812 5127 4210 170 12 31 chr18 30399189 30400519 -56277029 - L1P5 LINE L1 -428 5728 4412 * 28 91 0 0 chr18 30401810 30401887 -56275661 + AT_rich Low_complexity Low_complexity 1 77 0 447 19 0 0 chr18 30402773 30402825 -56274723 + (TG)n Simple_repeat Simple_repeat 2 53 0 1687 193 22 17 chr18 30402825 30403183 -56274365 - MLT1A1 LTR MaLR -4 361 2 565 236 8 0 chr18 30403508 30403631 -56273917 + MIR SINE MIR 66 189 -73 429 329 61 20 chr18 30403958 30404204 -56273344 + MIR SINE MIR 1 256 -6 297 0 0 0 chr18 30404713 30404746 -56272802 + (TG)n Simple_repeat Simple_repeat 2 34 0 1598 173 53 7 chr18 30404826 30405110 -56272438 + AluSx SINE Alu 1 297 -15 611 63 0 32 chr18 30405114 30405209 -56272339 + AluY SINE Alu 41 132 -179 1314 219 137 0 chr18 30405330 30405645 -56271903 + MLT1A1 LTR MaLR 6 363 -2 240 314 159 45 chr18 30406205 30406645 -56270903 + L2 LINE L2 1799 2288 -1026 309 323 40 24 chr18 30406649 30406773 -56270775 + L2 LINE L2 2649 2774 -540 814 162 113 164 chr18 30408072 30408617 -56268931 - MER66A LTR ERV1 -23 504 100 308 284 0 60 chr18 30408714 30408830 -56268718 + L1MC4 LINE L1 6595 6703 -1339 207 184 0 0 chr18 30408830 30408868 -56268680 + (CATA)n Simple_repeat Simple_repeat 4 41 0 2162 35 39 77 chr18 30408987 30409299 -56268249 + AluY SINE Alu 1 300 -11 1116 47 0 82 chr18 30409592 30409762 -56267786 + AluY SINE Alu 146 301 -10 22 0 0 0 chr18 30410283 30410305 -56267243 + AT_rich Low_complexity Low_complexity 1 22 0 515 299 115 1 chr18 30410463 30410783 -56266765 - L1ME LINE L1 -370 5751 5384 180 219 0 0 chr18 30410874 30410915 -56266633 + CT-rich Low_complexity Low_complexity 1 41 0 27 49 0 0 chr18 30411116 30411157 -56266391 + AT_rich Low_complexity Low_complexity 1 41 0 285 75 0 0 chr18 30411339 30411379 -56266169 + (CTATT)n Simple_repeat Simple_repeat 3 42 0 270 282 9 18 chr18 30411381 30411491 -56266057 + (CCTAT)n Simple_repeat Simple_repeat 1 109 0 22 0 0 0 chr18 30411690 30411712 -56265836 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr18 30411883 30411914 -56265634 + AT_rich Low_complexity Low_complexity 1 31 0 1191 170 54 9 chr18 30412602 30412708 -56264840 - AluJo SINE Alu -73 239 139 369 0 0 0 chr18 30412708 30412749 -56264799 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1191 170 54 9 chr18 30412749 30412865 -56264683 - AluJo SINE Alu -173 139 7 25 0 0 0 chr18 30413103 30413128 -56264420 + AT_rich Low_complexity Low_complexity 1 25 0 375 282 181 53 chr18 30413215 30413328 -56264220 - L1M4 LINE L1 -2701 3445 3348 2388 185 48 16 chr18 30413328 30413826 -56263722 + MLT2B2 LTR ERVL 1 514 -1 375 282 181 53 chr18 30413826 30414109 -56263439 - L1M4 LINE L1 -2798 3348 2998 245 303 139 32 chr18 30414421 30414672 -56262876 - HAL1 LINE L1 -848 1659 1382 246 346 13 13 chr18 30414705 30414861 -56262687 - L1MEd LINE L1 -5959 160 5 21 36 0 0 chr18 30415865 30415893 -56261655 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr18 30416731 30416755 -56260793 + AT_rich Low_complexity Low_complexity 1 24 0 261 137 41 55 chr18 30416766 30416839 -56260709 - L1MC4 LINE L1 -1333 6709 6638 1363 243 80 86 chr18 30417105 30417653 -56259895 - MLT1H1 LTR MaLR -2 553 9 232 365 0 0 chr18 30418329 30418414 -56259134 - MIR3 SINE MIR -13 195 111 1499 254 101 35 chr18 30418520 30418984 -56258564 - MLT1E LTR MaLR -2 591 86 1777 144 64 25 chr18 30418984 30419345 -56258203 - THE1C LTR MaLR 0 375 1 1499 254 101 35 chr18 30419345 30419415 -56258133 - MLT1E LTR MaLR -507 86 22 29 28 0 0 chr18 30419435 30419471 -56258077 + AT_rich Low_complexity Low_complexity 1 36 0 220 211 0 0 chr18 30420083 30420121 -56257427 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 600 102 33 6 chr18 30421203 30421320 -56256228 + MLT1B LTR MaLR 305 386 -4 2198 103 0 0 chr18 30421583 30421912 -56255636 + AluSc SINE Alu 1 329 0 766 215 23 29 chr18 30422223 30422395 -56255153 - AluJo SINE Alu -20 292 122 375 197 84 0 chr18 30423709 30423780 -56253768 + Tigger3(Golem) DNA MER2_type 1 77 -2952 * 823 183 22 0 chr18 30423778 30423915 -56253633 + Tigger3(Golem) DNA MER2_type 2896 3035 0 1377 240 30 25 chr18 30424009 30424375 -56253173 - MER82 DNA MER2_type -7 646 279 398 207 37 0 chr18 30424425 30424507 -56253041 + Tigger5 DNA MER2_type 2238 2322 -1 1500 181 22 4 chr18 30424507 30424783 -56252765 - MER82 DNA MER2_type -372 281 1 277 333 53 0 chr18 30424832 30424946 -56252602 + MIR SINE MIR 41 160 -102 552 249 185 60 chr18 30426076 30426525 -56251023 + L1MC4a LINE L1 5522 6026 -1782 21 71 0 0 chr18 30427378 30427420 -56250128 + AT_rich Low_complexity Low_complexity 1 42 0 666 122 187 0 chr18 30427682 30427821 -56249727 - L1MA6 LINE L1 -363 5937 5773 533 324 125 4 chr18 30428006 30428409 -56249139 - L2 LINE L2 -139 3174 2722 23 54 0 0 chr18 30428457 30428494 -56249054 + AT_rich Low_complexity Low_complexity 1 37 0 187 389 16 24 chr18 30428907 30429033 -56248515 - L2 LINE L2 -212 3060 2936 452 288 28 28 chr18 30429888 30430045 -56247503 - MIR3 SINE MIR -1 207 50 535 295 27 6 chr18 30433195 30433378 -56244170 + MIR SINE MIR 64 250 -12 3878 224 67 62 chr18 30434859 30436038 -56241510 + L1MC4 LINE L1 6681 7853 -189 1032 231 20 103 chr18 30436038 30436436 -56241112 - MLT1A1 LTR MaLR 0 365 1 3878 224 67 62 chr18 30436436 30436470 -56241078 + L1MC4 LINE L1 7853 7885 -157 428 77 15 0 chr18 30436470 30436535 -56241013 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 3878 224 67 62 chr18 30436535 30436670 -56240878 + L1MC4 LINE L1 7885 8036 -6 23 0 0 0 chr18 30436670 30436693 -56240855 + AT_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr18 30436847 30436883 -56240665 + AT_rich Low_complexity Low_complexity 1 36 0 865 191 38 0 chr18 30438584 30438741 -56238807 + FAM SINE Alu 13 175 -10 225 0 0 0 chr18 30441814 30441839 -56235709 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 24 53 0 0 chr18 30441970 30442008 -56235540 + AT_rich Low_complexity Low_complexity 1 38 0 13193 27 0 0 chr18 30442008 30444330 -56233218 - L1PA2 LINE L1 -10 6145 3823 310 123 0 0 chr18 30444535 30444586 -56232962 - MLT2D LTR ERVL -3 394 350 226 211 0 0 chr18 30444586 30444624 -56232924 + (CGTG)n Simple_repeat Simple_repeat 2 39 0 271 111 19 19 chr18 30444630 30444684 -56232864 + (GA)n Simple_repeat Simple_repeat 2 55 0 1857 172 15 24 chr18 30444733 30445070 -56232478 - MLT2D LTR ERVL -76 338 5 208 377 47 9 chr18 30446978 30447084 -56230464 + MIR SINE MIR 30 139 -69 273 389 61 0 chr18 30447862 30447993 -56229555 - L2 LINE L2 -1 3271 3133 395 128 0 13 chr18 30448861 30448939 -56228609 + (GGGA)n Simple_repeat Simple_repeat 2 78 0 294 341 187 10 chr18 30448944 30449571 -56227977 + HAL1 LINE L1 1047 1784 -723 319 222 208 28 chr18 30449929 30450073 -56227475 + HAL1 LINE L1 2142 2311 -196 29 60 0 0 chr18 30450246 30450296 -56227252 + AT_rich Low_complexity Low_complexity 1 50 0 201 380 43 12 chr18 30451534 30451697 -56225851 + L3 LINE CR1 190 357 -1220 2090 130 0 0 chr18 30452359 30452660 -56224888 + AluSx SINE Alu 11 311 -1 329 278 62 0 chr18 30453347 30453444 -56224104 + L1MC/D LINE L1 4755 4857 -1289 718 314 122 9 chr18 30453790 30454223 -56223325 + L1MC/D LINE L1 5257 5738 -2070 22 0 0 0 chr18 30454267 30454289 -56223259 + AT_rich Low_complexity Low_complexity 1 22 0 207 270 108 36 chr18 30456224 30456335 -56221213 - MIR SINE MIR -10 252 134 22 35 0 0 chr18 30457101 30457130 -56220418 + AT_rich Low_complexity Low_complexity 1 29 0 7205 145 7 13 chr18 30457136 30459472 -56218076 - L1MA1 LINE L1 -4 6298 3970 324 0 0 0 chr18 30459475 30459511 -56218037 + (T)n Simple_repeat Simple_repeat 1 36 0 8811 211 18 10 chr18 30459857 30460210 -56217338 - L1 LINE L1 -1826 5739 5390 2843 6 0 0 chr18 30460210 30460521 -56217027 - AluYa5 SINE Alu 0 311 1 8811 211 18 10 chr18 30460521 30462508 -56215040 - L1 LINE L1 -2175 5390 3379 23 54 0 0 chr18 30463535 30463572 -56213976 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr18 30463652 30463674 -56213874 + AT_rich Low_complexity Low_complexity 1 22 0 2441 101 8 40 chr18 30463902 30464280 -56213268 - THE1C LTR MaLR 0 375 10 189 121 0 0 chr18 30465518 30465551 -56211997 + (CA)n Simple_repeat Simple_repeat 1 33 0 635 278 67 26 chr18 30466055 30466325 -56211223 + L2 LINE L2 3032 3312 -1 437 306 72 25 chr18 30466344 30466579 -56210969 - LTR16A1 LTR ERVL -2 455 210 252 280 145 85 chr18 30466825 30467025 -56210523 - MIR SINE MIR -50 212 1 26 0 0 0 chr18 30467929 30467955 -56209593 + AT_rich Low_complexity Low_complexity 1 26 0 588 316 110 12 chr18 30468731 30469149 -56208399 - L1ME4a LINE L1 -251 5870 5412 2238 86 3 16 chr18 30470990 30471293 -56206255 - AluY SINE Alu -12 299 1 182 411 0 0 chr18 30471472 30471528 -56206020 + L2 LINE L2 3229 3284 -29 2141 107 3 3 chr18 30471848 30472137 -56205411 - AluSx SINE Alu -23 289 1 827 271 18 21 chr18 30472351 30472631 -56204917 - LTR4 LTR ERV1 0 596 318 297 220 44 55 chr18 30472908 30472999 -56204549 - LTR4 LTR ERV1 -506 90 1 256 229 0 0 chr18 30474454 30474515 -56203033 + MER4-int LTR ERV1 1105 1165 -5433 770 300 63 36 chr18 30474563 30475089 -56202459 - L1MC4 LINE L1 -231 7811 7272 1812 168 58 3 chr18 30475094 30475421 -56202127 + MER7A DNA MER2_type 1 343 -3 1121 248 159 104 chr18 30475427 30476492 -56201056 - L1MC4 LINE L1 -623 7185 6063 1334 300 91 13 chr18 30476557 30477107 -56200441 - MLT2F LTR ERVL -70 593 1 30 27 0 0 chr18 30477133 30477170 -56200378 + AT_rich Low_complexity Low_complexity 1 37 0 1788 287 85 9 chr18 30477430 30478086 -56199462 - ERVL-F LTR ERVL -332 5432 4727 260 211 19 0 chr18 30478173 30478225 -56199323 - ERVL-F LTR ERVL -1073 4691 4639 1737 239 75 111 chr18 30478227 30480062 -56197486 - L1MC4a LINE L1 -858 5288 4400 2125 184 10 31 chr18 30480743 30481157 -56196391 + MER67D LTR ERV1 5 409 -105 22 0 0 0 chr18 30482426 30482448 -56195100 + AT_rich Low_complexity Low_complexity 1 22 0 246 249 24 3 chr18 30482476 30482550 -56194998 - MIR SINE MIR -48 160 84 683 306 64 6 chr18 30483278 30483690 -56193858 + LTR33 LTR ERVL 3 487 -34 299 287 155 22 chr18 30483775 30483956 -56193592 + MIR SINE MIR 12 216 -46 1077 175 32 74 chr18 30483956 30484294 -56193254 - MER33 DNA MER1_type 0 324 1 3354 166 43 14 chr18 30484324 30484950 -56192598 + LTR48B LTR ERV1 1 644 0 1477 171 104 7 chr18 30485058 30485367 -56192181 - MER44D DNA MER2_type 0 609 1 26 30 0 0 chr18 30485461 30485494 -56192054 + AT_rich Low_complexity Low_complexity 1 33 0 397 319 9 0 chr18 30485891 30486004 -56191544 + L2 LINE L2 3198 3311 -2 1889 274 35 5 chr18 30486653 30487218 -56190330 - L1ME3A LINE L1 -5 6165 5584 209 33 33 0 chr18 30487317 30487347 -56190201 + (TA)n Simple_repeat Simple_repeat 2 32 0 1652 137 0 0 chr18 30487896 30488145 -56189403 + AluSq SINE Alu 58 306 -7 24 53 0 0 chr18 30488170 30488208 -56189340 + AT_rich Low_complexity Low_complexity 1 38 0 643 50 0 0 chr18 30488551 30488631 -56188917 + MADE1 DNA Mariner 1 80 0 2190 96 4 101 chr18 30488960 30489442 -56188106 - MER1A DNA MER1_type -1 532 94 452 263 26 20 chr18 30489442 30489594 -56187954 - L1 LINE L1 -1038 5108 4956 6174 79 1 35 chr18 30489594 30490217 -56187331 + L1PB1 LINE L1 5159 5739 -412 252 0 0 0 chr18 30490217 30490245 -56187303 + (TG)n Simple_repeat Simple_repeat 2 29 0 6174 79 1 35 chr18 30490245 30490644 -56186904 + L1PB1 LINE L1 5739 6150 -1 606 211 0 0 chr18 30490665 30490779 -56186769 - MER1A DNA MER1_type -413 114 1 1481 223 121 24 chr18 30490882 30491469 -56186079 + LTR48B LTR ERV1 1 644 0 191 365 65 9 chr18 30491929 30492036 -56185512 - L2 LINE L2 -19 3294 3182 1373 241 90 28 chr18 30492106 30492538 -56185010 - MER39 LTR ERV1 0 707 249 31 0 0 0 chr18 30492608 30492639 -56184909 + AT_rich Low_complexity Low_complexity 1 31 0 184 235 0 0 chr18 30492894 30492928 -56184620 - L2 LINE L2 -257 3056 3023 218 274 0 0 chr18 30493154 30493205 -56184343 + L2 LINE L2 3263 3313 0 2754 206 39 19 chr18 30493244 30493596 -56183952 + MER39 LTR ERV1 75 446 -261 2502 163 14 5 chr18 30493596 30494020 -56183528 + MSTA LTR MaLR 1 428 0 2754 206 39 19 chr18 30494020 30494288 -56183260 + MER39 LTR ERV1 446 707 0 1124 146 53 143 chr18 30494804 30495161 -56182387 + MER39-int LTR ERV1 1372 1696 -4635 1343 267 31 6 chr18 30495188 30495514 -56182034 + MER39-int LTR ERV1 1909 2242 -4089 830 301 27 64 chr18 30495646 30496077 -56181471 + MER39-int LTR ERV1 753 2647 -3684 291 254 28 0 chr18 30496080 30496151 -56181397 + MER31A LTR ERV1 26 98 -387 272 133 0 0 chr18 30496158 30496203 -56181345 - MER54B LTR ERVL -2 791 747 528 164 25 157 chr18 30496212 30496371 -56181177 - MER73 LTR ERVL -496 148 11 495 189 47 104 chr18 30496613 30496802 -56180746 + MER39-int LTR ERV1 1096 1294 -3577 5387 133 12 21 chr18 30496802 30498018 -56179530 + L1PA16 LINE L1 4941 6156 -10 495 189 47 104 chr18 30498018 30498342 -56179206 + MER39-int LTR ERV1 1294 2025 -2846 374 292 28 42 chr18 30498527 30498671 -56178877 + MER39-int LTR ERV1 3264 3405 -2926 29 78 0 0 chr18 30498790 30498854 -56178694 + AT_rich Low_complexity Low_complexity 1 64 0 548 216 78 38 chr18 30499022 30499341 -56178207 + MER39-int LTR ERV1 1925 2256 -2867 535 179 55 93 chr18 30499404 30499661 -56177887 + MER39-int LTR ERV1 4165 4411 -3709 6144 207 64 74 chr18 30499691 30500255 -56177293 + MER39-int LTR ERV1 3953 4521 -1810 1707 193 0 16 chr18 30500255 30500566 -56176982 - AluJb SINE Alu -6 306 1 6144 207 64 74 chr18 30500566 30502238 -56175310 + MER39-int LTR ERV1 4521 6181 -150 2762 193 80 7 chr18 30502328 30502904 -56174644 + MER39 LTR ERV1 90 707 0 2449 59 0 3 chr18 30502990 30503294 -56174254 + AluY SINE Alu 1 303 -8 2126 150 94 23 chr18 30504742 30505169 -56172379 - MSTB2 LTR MaLR 0 457 1 893 294 117 35 chr18 30505823 30506652 -56170896 - L1ME3A LINE L1 -16 6154 5258 24 0 0 0 chr18 30506790 30506814 -56170734 + AT_rich Low_complexity Low_complexity 1 24 0 204 40 0 0 chr18 30507904 30507929 -56169619 + (A)n Simple_repeat Simple_repeat 1 25 0 2058 139 106 16 chr18 30507946 30508334 -56169214 - MSTB1 LTR MaLR 0 432 10 860 274 9 18 chr18 30508966 30509192 -56168356 - MER58A DNA MER1_type 0 224 1 304 193 204 23 chr18 30509209 30509240 -56168308 + MER5A DNA MER1_type 9 33 -156 608 259 99 0 chr18 30509240 30509402 -56168146 - MER45A DNA AcHobo 0 178 1 304 193 204 23 chr18 30509402 30509458 -56168090 + MER5A DNA MER1_type 33 112 -77 926 263 74 0 chr18 30509808 30510051 -56167497 + MIR SINE MIR 2 262 0 233 193 18 18 chr18 30510321 30510378 -56167170 + MER58A DNA MER1_type 153 209 -15 1975 121 7 0 chr18 30510874 30511155 -56166393 + AluSp SINE Alu 1 283 -30 7168 40 6 0 chr18 30511155 30513474 -56164074 + L1PA5 LINE L1 3757 6151 -3 835 206 210 32 chr18 30514173 30514483 -56163065 + MLT1A1 LTR MaLR 1 365 0 351 284 30 52 chr18 30515976 30516110 -56161438 + L2 LINE L2 2476 2606 -708 3230 131 33 25 chr18 30516176 30516694 -56160854 + MER1A DNA MER1_type 8 529 0 977 298 110 18 chr18 30516696 30517330 -56160218 + L2 LINE L2 2628 3313 0 29 28 0 0 chr18 30517433 30517469 -56160079 + AT_rich Low_complexity Low_complexity 1 36 0 1189 196 0 25 chr18 30517519 30517754 -56159794 + AluJo SINE Alu 84 312 0 39 68 0 0 chr18 30517823 30517897 -56159651 + AT_rich Low_complexity Low_complexity 1 74 0 279 0 0 0 chr18 30517979 30518010 -56159538 + (CA)n Simple_repeat Simple_repeat 2 32 0 617 279 62 56 chr18 30518356 30518692 -56158856 - MLT1I LTR MaLR -15 394 57 3232 155 111 34 chr18 30518692 30519491 -56158057 + MER4D LTR ERV1 1 870 -2 251 139 23 0 chr18 30519508 30519551 -56157997 - MLT1I LTR MaLR -365 44 1 612 312 89 77 chr18 30519701 30520607 -56156941 + L1MEd LINE L1 43 959 -5160 561 198 156 18 chr18 30520609 30520776 -56156772 - L1MB4 LINE L1 0 6180 5991 * 3178 242 123 36 chr18 30520758 30521085 -56156463 - L1M4 LINE L1 -2520 4124 3827 1751 133 60 7 chr18 30521085 30521370 -56156178 - AluSg SINE Alu -10 300 1 3178 242 123 36 chr18 30521370 30522370 -56155178 - L1M4 LINE L1 -2817 3827 2681 10613 226 37 9 chr18 30522371 30522454 -56155094 + L1MB2 LINE L1 2358 2437 -3734 1798 197 29 9 chr18 30522454 30522794 -56154754 - MER7A DNA MER2_type -1 345 1 10613 226 37 9 chr18 30522794 30526337 -56151211 + L1MB2 LINE L1 2437 6089 -82 920 194 71 5 chr18 30526338 30526442 -56151106 + MER2 DNA MER2_type 2 98 -247 246 62 0 0 chr18 30526442 30526474 -56151074 + (CA)n Simple_repeat Simple_repeat 1 32 0 920 194 71 5 chr18 30526474 30526565 -56150983 + MER2 DNA MER2_type 98 210 -135 539 193 0 9 chr18 30526568 30526677 -56150871 - FLAM_A SINE Alu -1 141 34 386 224 13 0 chr18 30526695 30526771 -56150777 + MER2 DNA MER2_type 269 345 0 603 254 87 56 chr18 30526851 30527174 -56150374 - L1M4 LINE L1 -5869 673 341 312 262 73 43 chr18 30527491 30527655 -56149893 + L1MEd LINE L1 980 1148 -4971 2274 170 104 7 chr18 30527662 30528123 -56149425 + MER61D LTR ERV1 1 501 0 254 278 0 22 chr18 30528123 30528213 -56149335 + L1MEd LINE L1 1153 1240 -4879 27 0 0 0 chr18 30528270 30528297 -56149251 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr18 30529404 30529439 -56148109 + AT_rich Low_complexity Low_complexity 1 35 0 561 164 67 0 chr18 30529442 30529546 -56148002 - MSTB1 LTR MaLR 0 432 322 1705 178 129 36 chr18 30529549 30529622 -56147926 - MSTB1 LTR MaLR -33 399 334 1812 107 12 4 chr18 30529622 30529874 -56147674 + AluSx SINE Alu 39 292 -20 1705 178 129 36 chr18 30529874 30530165 -56147383 - MSTB1 LTR MaLR -98 334 1 672 325 36 3 chr18 30530167 30530527 -56147021 + L1ME3A LINE L1 5585 5956 -214 1649 187 89 15 chr18 30530754 30530903 -56146645 + MSTB LTR MaLR 3 140 -286 1632 178 3 7 chr18 30530903 30531190 -56146358 - AluSx SINE Alu -26 286 1 1649 187 89 15 chr18 30531190 30531431 -56146117 + MSTB LTR MaLR 140 422 -4 798 312 103 18 chr18 30531435 30531575 -56145973 - L2 LINE L2 -1028 2286 2159 2238 192 69 0 chr18 30531575 30532012 -56145536 + MLT1C LTR MaLR 1 467 0 798 312 103 18 chr18 30532012 30532269 -56145279 - L2 LINE L2 -1155 2159 1855 315 0 0 0 chr18 30532284 30532319 -56145229 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1326 191 59 0 chr18 30532331 30532456 -56145092 - AluJb SINE Alu -57 255 139 189 0 0 0 chr18 30532456 30532477 -56145071 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1326 191 59 0 chr18 30532477 30532587 -56144961 - AluJb SINE Alu -173 139 6 595 318 87 7 chr18 30532600 30532886 -56144662 - L2 LINE L2 -1485 1829 1521 259 278 87 70 chr18 30533034 30533149 -56144399 - L2 LINE L2 -9 3304 3188 474 316 84 11 chr18 30533300 30533490 -56144058 - L2 LINE L2 -1946 1368 1165 535 143 11 0 chr18 30534844 30534935 -56142613 + MLT1A1 LTR MaLR 1 92 -273 2319 49 0 68 chr18 30534956 30535280 -56142268 + AluY SINE Alu 1 302 -9 25 0 0 0 chr18 30535456 30535481 -56142067 + AT_rich Low_complexity Low_complexity 1 25 0 308 233 0 14 chr18 30535628 30535701 -56141847 - MERVL LTR ERVL -2167 3318 3247 609 162 0 9 chr18 30535950 30536061 -56141487 + MSTA LTR MaLR 1 110 -318 1247 182 105 16 chr18 30536166 30536424 -56141124 + MSTA LTR MaLR 148 428 0 266 332 119 8 chr18 30536427 30536662 -56140886 - MERVL LTR ERVL -2690 2964 2704 272 224 60 60 chr18 30537554 30537670 -56139878 - LTR33A LTR ERVL -3 520 405 186 317 81 32 chr18 30537996 30538119 -56139429 + L2 LINE L2 2629 2757 -557 2390 50 0 10 chr18 30538584 30538881 -56138667 - AluY SINE Alu -17 294 1 210 365 60 65 chr18 30539103 30539670 -56137878 + L2 LINE L2 718 1281 -2033 479 374 0 10 chr18 30539703 30539906 -56137642 + L2 LINE L2 2094 2294 -1020 1418 91 5 25 chr18 30541587 30541818 -56135730 - AluSg/x SINE Alu 0 315 89 2418 127 3 3 chr18 30542383 30542738 -56134810 + THE1A LTR MaLR 1 355 0 224 222 0 0 chr18 30543564 30543609 -56133939 - L2 LINE L2 0 3313 3269 679 277 48 56 chr18 30544123 30544282 -56133266 + HAL1 LINE L1 1356 1515 -992 2237 55 0 39 chr18 30544282 30544590 -56132958 - AluY SINE Alu -15 296 1 679 277 48 56 chr18 30544590 30544805 -56132743 + HAL1 LINE L1 1515 1727 -780 243 0 0 0 chr18 30544876 30544903 -56132645 + (TA)n Simple_repeat Simple_repeat 2 28 0 279 231 13 13 chr18 30545532 30545610 -56131938 + MIR SINE MIR 184 261 -1 752 332 51 54 chr18 30545946 30546479 -56131069 + ERVL LTR ERVL 3665 4195 -1569 1021 234 111 30 chr18 30546500 30546833 -56130715 + MLT1A1 LTR MaLR 3 362 -3 647 344 59 14 chr18 30546881 30547349 -56130199 + ERVL LTR ERVL 4223 4770 -757 189 0 0 0 chr18 30547349 30547370 -56130178 + (TTG)n Simple_repeat Simple_repeat 1 21 0 647 344 59 14 chr18 30547370 30547404 -56130144 + ERVL LTR ERVL 4770 4801 -726 875 300 94 19 chr18 30547418 30547778 -56129770 + MLT1I LTR MaLR 11 397 -12 210 71 0 0 chr18 30547816 30547844 -56129704 + (GA)n Simple_repeat Simple_repeat 1 28 0 297 248 21 0 chr18 30547860 30548005 -56129543 + (TA)n Simple_repeat Simple_repeat 1 148 0 25 0 0 0 chr18 30548612 30548637 -56128911 + AT_rich Low_complexity Low_complexity 1 25 0 1452 189 0 59 chr18 30548989 30549296 -56128252 - AluJo SINE Alu -23 289 1 241 165 24 94 chr18 30549559 30549644 -56127904 + MLT1I-int LTR MaLR 1629 1707 -28 984 303 47 18 chr18 30549686 30550072 -56127476 + MLT1I LTR MaLR 13 409 0 881 313 92 57 chr18 30550073 30550903 -56126645 + ERVL LTR ERVL 4808 5666 -98 300 272 120 52 chr18 30551347 30551597 -56125951 + L1ME LINE L1 4060 4326 -1820 1195 240 91 26 chr18 30551732 30552081 -56125467 - MLT1D LTR MaLR 0 505 134 720 250 152 65 chr18 30552081 30552417 -56125131 + MLT1A1 LTR MaLR 1 365 0 437 263 53 0 chr18 30552417 30552531 -56125017 - MLT1D LTR MaLR -367 138 19 500 311 62 20 chr18 30552817 30553171 -56124377 + L1ME LINE L1 5419 5787 -375 353 248 44 51 chr18 30553896 30554033 -56123515 - MER69A DNA AcHobo -26 151 16 447 349 33 48 chr18 30554051 30554447 -56123101 + L1M4 LINE L1 4011 4400 -1746 1771 223 51 41 chr18 30554755 30555092 -56122456 - L1MB5 LINE L1 -47 6127 5782 240 35 0 0 chr18 30555092 30555121 -56122427 + (TG)n Simple_repeat Simple_repeat 2 30 0 1771 223 51 41 chr18 30555121 30555276 -56122272 - L1MB5 LINE L1 -392 5782 5630 23 68 0 0 chr18 30555733 30555777 -56121771 + AT_rich Low_complexity Low_complexity 1 44 0 602 75 0 0 chr18 30555815 30555895 -56121653 + MADE1 DNA Mariner 1 80 0 186 242 0 0 chr18 30556301 30556367 -56121181 + (TA)n Simple_repeat Simple_repeat 2 67 0 386 256 0 0 chr18 30556372 30556454 -56121094 - Tigger5 DNA MER2_type 0 2323 2242 307 286 0 0 chr18 30556444 30556521 -56121027 + Tigger5 DNA MER2_type 2242 2318 -5 * 25 51 0 0 chr18 30556669 30556708 -56120840 + AT_rich Low_complexity Low_complexity 1 39 0 1199 209 75 7 chr18 30557063 30557341 -56120207 + AluSg SINE Alu 2 298 -2 226 286 29 0 chr18 30557370 30557440 -56120108 + GA-rich Low_complexity Low_complexity 1 72 0 26 0 0 0 chr18 30557866 30557892 -56119656 + AT_rich Low_complexity Low_complexity 1 26 0 408 296 107 6 chr18 30559895 30560064 -56117484 + MIR SINE MIR 64 249 -13 294 125 0 0 chr18 30560629 30560677 -56116871 + (TTAAA)n Simple_repeat Simple_repeat 5 52 0 23 54 0 0 chr18 30561107 30561144 -56116404 + AT_rich Low_complexity Low_complexity 1 37 0 199 326 137 11 chr18 30561605 30561700 -56115848 + L2 LINE L2 2973 3079 -193 997 238 117 45 chr18 30562057 30562460 -56115088 + MLT1C LTR MaLR 8 439 -28 22 0 0 0 chr18 30562625 30562647 -56114901 + AT_rich Low_complexity Low_complexity 1 22 0 1945 104 20 34 chr18 30562747 30563045 -56114503 + AluSg SINE Alu 1 294 -16 25 51 0 0 chr18 30564394 30564433 -56113115 + AT_rich Low_complexity Low_complexity 1 39 0 340 279 125 0 chr18 30564731 30564835 -56112713 + L2 LINE L2 3197 3313 0 363 344 26 57 chr18 30564943 30565173 -56112375 - MIR SINE MIR 0 262 40 24 53 0 0 chr18 30565200 30565238 -56112310 + AT_rich Low_complexity Low_complexity 1 38 0 254 385 59 32 chr18 30566438 30566659 -56110889 + MIR SINE MIR 20 246 -16 338 252 78 43 chr18 30568258 30568373 -56109175 + L2 LINE L2 3188 3306 -7 209 289 0 0 chr18 30568431 30568476 -56109072 + L2 LINE L2 3220 3264 -8 5916 172 15 13 chr18 30568649 30570549 -56106999 - L1MA3 LINE L1 0 6305 4402 35 41 0 0 chr18 30570793 30570842 -56106706 + AT_rich Low_complexity Low_complexity 1 49 0 192 307 102 34 chr18 30571193 30571281 -56106267 + L2 LINE L2 3179 3272 0 2466 89 0 32 chr18 30571394 30571830 -56105718 - L1P4 LINE L1 -555 5613 5189 2453 88 21 0 chr18 30571829 30572190 -56105358 + L1PA10 LINE L1 5801 6168 0 * 2624 169 70 39 chr18 30572687 30573254 -56104294 + L1MB2 LINE L1 5587 6171 0 34 72 0 0 chr18 30573456 30573525 -56104023 + AT_rich Low_complexity Low_complexity 1 69 0 21 0 0 0 chr18 30573744 30573765 -56103783 + AT_rich Low_complexity Low_complexity 1 21 0 874 234 130 52 chr18 30574231 30574384 -56103164 - MLT2B1 LTR ERVL 0 414 274 1400 196 6 40 chr18 30574384 30574705 -56102843 + AluJo SINE Alu 3 312 0 874 234 130 52 chr18 30574705 30574935 -56102613 - MLT2B1 LTR ERVL -140 274 1 204 135 0 0 chr18 30575200 30575237 -56102311 + (TG)n Simple_repeat Simple_repeat 2 38 0 297 109 0 0 chr18 30578105 30578160 -56099388 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 1883 144 0 11 chr18 30578160 30578445 -56099103 - AluJb SINE Alu -30 282 1 306 192 39 10 chr18 30579214 30579318 -56098230 + (TA)n Simple_repeat Simple_repeat 1 107 0 320 326 87 15 chr18 30579655 30579851 -56097697 + L2 LINE L2 2718 2927 -387 274 277 76 34 chr18 30580015 30580134 -56097414 + L2 LINE L2 3165 3288 -25 26 64 0 0 chr18 30580271 30580318 -56097230 + AT_rich Low_complexity Low_complexity 1 47 0 399 350 62 31 chr18 30580578 30580867 -56096681 + L2 LINE L2 2565 2862 -452 319 329 50 96 chr18 30583703 30583983 -56093565 - L2 LINE L2 -1 3271 3005 32 26 0 0 chr18 30584139 30584178 -56093370 + AT_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr18 30584245 30584273 -56093275 + AT_rich Low_complexity Low_complexity 1 28 0 318 348 97 6 chr18 30584587 30584906 -56092642 - L1M4 LINE L1 -1940 4206 3859 1718 318 89 27 chr18 30585199 30585837 -56091711 + L2 LINE L2 89 811 -2503 2124 194 44 2 chr18 30585837 30586244 -56091304 - MSTB LTR MaLR -2 424 1 1718 318 89 27 chr18 30586244 30586592 -56090956 + L2 LINE L2 811 1136 -2178 859 319 18 36 chr18 30586748 30587083 -56090465 - LTR16A LTR ERVL -13 437 109 894 185 7 0 chr18 30587119 30587270 -56090278 - FRAM SINE Alu -24 152 1 2493 252 56 58 chr18 30587600 30588373 -56089175 + MER21B LTR ERV1 1 856 -75 1442 136 25 0 chr18 30588601 30588836 -56088712 + AluSg/x SINE Alu 70 310 0 508 380 31 10 chr18 30588953 30589307 -56088241 - HERV16 LTR ERVL -928 4557 4187 428 319 80 47 chr18 30589529 30589780 -56087768 - HERV16 LTR ERVL -1311 3685 3444 2085 122 7 0 chr18 30589780 30590068 -56087480 + AluSq SINE Alu 1 290 -23 207 69 0 0 chr18 30590071 30590100 -56087448 + (TAGA)n Simple_repeat Simple_repeat 3 31 0 428 319 80 47 chr18 30590100 30590296 -56087252 - HERV16 LTR ERVL -1553 3443 3219 436 348 16 11 chr18 30590453 30590640 -56086908 - HERV16 LTR ERVL -2374 3280 3093 1173 345 25 29 chr18 30590684 30591128 -56086420 - HERV16 LTR ERVL -1979 3017 2576 984 333 80 21 chr18 30591207 30591776 -56085772 - HERV16 LTR ERVL -2710 2286 1803 1845 214 45 87 chr18 30591777 30591943 -56085605 + MER92B LTR ERV1 1 172 -464 1626 186 39 33 chr18 30591943 30592304 -56085244 + MLT1A1 LTR MaLR 1 363 -2 1845 214 45 87 chr18 30592304 30592620 -56084928 + MER92B LTR ERV1 172 450 -186 2001 147 103 10 chr18 30592620 30593009 -56084539 - MSTA LTR MaLR -3 425 1 1845 214 45 87 chr18 30593009 30593189 -56084359 + MER92B LTR ERV1 450 636 0 1263 319 78 28 chr18 30594106 30594756 -56082792 - HERV16 LTR ERVL -4294 702 20 372 246 43 0 chr18 30594836 30594974 -56082574 + L1M4 LINE L1 2737 2880 -3266 728 200 0 0 chr18 30594974 30595104 -56082444 + FLAM_C SINE Alu 1 130 -13 21 0 0 0 chr18 30595105 30595126 -56082422 + AT_rich Low_complexity Low_complexity 1 21 0 247 192 51 13 chr18 30595131 30595209 -56082339 + L1M4 LINE L1 2861 2941 -3205 1081 146 0 6 chr18 30595407 30595616 -56081932 - AluJb SINE Alu 0 327 120 2918 189 12 28 chr18 30595770 30596310 -56081238 + L1MA7 LINE L1 4768 5306 -914 1636 152 48 31 chr18 30596310 30596663 -56080885 + L1MA8 LINE L1 5928 6288 -3 2918 189 12 28 chr18 30596663 30596831 -56080717 + L1MA7 LINE L1 5306 5475 -745 258 293 0 0 chr18 30596876 30596975 -56080573 + L1M4 LINE L1 4272 4370 -1776 1536 194 16 3 chr18 30596977 30597287 -56080261 + L1MA7 LINE L1 5474 5787 -504 14126 139 27 10 chr18 30597287 30598442 -56079106 + Tigger1 DNA MER2_type 1 1135 -1283 2408 48 0 16 chr18 30598442 30598751 -56078797 + AluY SINE Alu 1 304 -7 14126 139 27 10 chr18 30598751 30599958 -56077590 + Tigger1 DNA MER2_type 1135 2402 -16 2351 174 22 28 chr18 30599969 30600475 -56077073 + L1MA7 LINE L1 5786 6288 -3 1259 246 80 27 chr18 30600493 30601265 -56076283 + L1MC/D LINE L1 3338 4634 -1512 1232 250 22 58 chr18 30601258 30602064 -56075484 + L1MC/D LINE L1 4859 5629 -704 * 554 184 0 0 chr18 30602073 30602171 -56075377 + L1MC3 LINE L1 7681 7778 -7 2798 93 60 0 chr18 30602272 30602703 -56074845 + L1PA13 LINE L1 5703 6159 -4 279 114 0 0 chr18 30602851 30602895 -56074653 + (TG)n Simple_repeat Simple_repeat 2 45 0 234 254 0 17 chr18 30603099 30603158 -56074390 + L1P LINE L1 4906 4963 -1183 266 352 47 16 chr18 30603774 30603902 -56073646 + MER5B DNA MER1_type 1 132 -46 1525 141 21 96 chr18 30603919 30604253 -56073295 - MLT2A2 LTR ERVL -144 309 1 6500 113 10 3 chr18 30604253 30605501 -56072047 - HERVL-A2 LTR ERVL 0 5654 4332 * 10999 107 24 1 chr18 30605496 30607322 -56070226 - HERVL LTR ERVL -2603 3051 1091 21 0 0 0 chr18 30607689 30607710 -56069838 + AT_rich Low_complexity Low_complexity 1 21 0 25 75 0 0 chr18 30608274 30608327 -56069221 + AT_rich Low_complexity Low_complexity 1 53 0 1182 141 21 47 chr18 30608722 30608956 -56068592 + L1PA11 LINE L1 5944 6171 -3 4220 94 22 22 chr18 30609739 30610364 -56067184 + L1PA13 LINE L1 5519 6143 -20 281 323 21 10 chr18 30610511 30610607 -56066941 + MIR SINE MIR 3 99 -163 353 213 11 11 chr18 30611456 30611550 -56065998 + L1MEd LINE L1 25 118 -6001 464 242 117 0 chr18 30611871 30611991 -56065557 - MIR SINE MIR -4 258 125 26 50 0 0 chr18 30613108 30613148 -56064400 + AT_rich Low_complexity Low_complexity 1 40 0 21 57 0 0 chr18 30613773 30613808 -56063740 + AT_rich Low_complexity Low_complexity 1 35 0 2126 91 0 3 chr18 30614202 30614487 -56063061 - AluSg SINE Alu -10 300 17 211 258 0 30 chr18 30615394 30615460 -56062088 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 326 294 76 66 chr18 30615862 30616059 -56061489 + MIR SINE MIR 40 238 -24 189 308 39 0 chr18 30617190 30617268 -56060280 - L3b LINE CR1 -155 1428 1348 24 0 0 0 chr18 30617462 30617486 -56060062 + AT_rich Low_complexity Low_complexity 1 24 0 2427 59 0 3 chr18 30617990 30618293 -56059255 + AluY SINE Alu 1 302 -9 192 319 133 44 chr18 30619447 30619560 -56057988 - L2 LINE L2 -2 3270 3148 222 37 0 0 chr18 30619688 30619715 -56057833 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 363 102 0 0 chr18 30619717 30619766 -56057782 - AluJ/FRAM SINE Alu -21 281 233 408 226 29 44 chr18 30620099 30620236 -56057312 + MER103 DNA DNA 20 154 -12 240 343 116 38 chr18 30620349 30620420 -56057128 - L2 LINE L2 -585 2729 2665 1727 169 4 0 chr18 30620420 30620745 -56056803 + AluSx SINE Alu 9 334 0 240 343 116 38 chr18 30620745 30621144 -56056404 - L2 LINE L2 -649 2665 2220 22 70 0 0 chr18 30622835 30622878 -56054670 + AT_rich Low_complexity Low_complexity 1 43 0 2244 261 55 39 chr18 30623001 30623336 -56054212 - HsTC2 DNA Tc2 -1058 840 512 1981 182 101 21 chr18 30623336 30623764 -56053784 + MLT2C2 LTR ERVL 3 464 0 2244 261 55 39 chr18 30623764 30624254 -56053294 - HsTC2 DNA Tc2 -1386 512 2 439 368 51 33 chr18 30624456 30624845 -56052703 + HAL1 LINE L1 1247 1642 -865 1715 102 0 0 chr18 30625105 30625330 -56052218 - AluY SINE Alu -3 308 84 330 80 0 0 chr18 30625856 30625906 -56051642 + (CA)n Simple_repeat Simple_repeat 1 50 0 2051 159 0 9 chr18 30625959 30626293 -56051255 - MER7A DNA MER2_type 0 346 18 303 366 119 17 chr18 30628310 30628545 -56049003 + L1MC/D LINE L1 5574 5832 -1976 213 154 0 0 chr18 30629631 30629670 -56047878 + (TG)n Simple_repeat Simple_repeat 2 40 0 2119 107 13 7 chr18 30630586 30630894 -56046654 + AluSg SINE Alu 1 310 0 2130 89 6 49 chr18 30631737 30632061 -56045487 - AluSx SINE Alu -2 310 1 300 358 144 20 chr18 30632170 30632622 -56044926 + L2 LINE L2 2804 3311 -2 201 158 0 88 chr18 30633367 30633424 -56044124 + A-rich Low_complexity Low_complexity 5 56 0 22 56 0 0 chr18 30633432 30633468 -56044080 + AT_rich Low_complexity Low_complexity 1 36 0 2290 145 30 25 chr18 30634220 30634655 -56042893 - LTR23 LTR ERV1 0 437 1 606 214 89 18 chr18 30634779 30634947 -56042601 - L1MB8 LINE L1 -2 6176 5997 369 0 0 0 chr18 30635261 30635302 -56042246 + (TG)n Simple_repeat Simple_repeat 2 42 0 213 39 0 0 chr18 30635435 30635461 -56042087 + (TG)n Simple_repeat Simple_repeat 1 26 0 536 200 9 0 chr18 30635532 30635637 -56041911 + FLAM_A SINE Alu 1 106 -36 228 272 4 105 chr18 30635792 30636020 -56041528 - L1MEc LINE L1 -4460 1936 1732 1544 276 65 48 chr18 30636042 30637637 -56039911 - L1M4c LINE L1 -4453 2685 931 490 288 111 18 chr18 30638239 30638465 -56039083 - L1M4c LINE L1 -6601 258 12 21 0 0 0 chr18 30638911 30638932 -56038616 + AT_rich Low_complexity Low_complexity 1 21 0 820 295 119 43 chr18 30640312 30640749 -56036799 - L2 LINE L2 -6 3307 2838 * 1960 312 107 64 chr18 30640718 30642302 -56035246 - L2 LINE L2 -874 2440 789 352 221 32 0 chr18 30642546 30642641 -56034907 + L1MC4a LINE L1 5740 5837 -1971 186 43 0 0 chr18 30642671 30642694 -56034854 + (T)n Simple_repeat Simple_repeat 1 23 0 441 247 186 26 chr18 30642699 30642893 -56034655 - L2 LINE L2 -1829 1485 1261 213 39 0 0 chr18 30643729 30643755 -56033793 + (TG)n Simple_repeat Simple_repeat 2 27 0 349 358 77 46 chr18 30647391 30647718 -56029830 + L2 LINE L2 2916 3252 -20 22 56 0 0 chr18 30648237 30648273 -56029275 + AT_rich Low_complexity Low_complexity 1 36 0 1019 300 147 30 chr18 30648997 30649721 -56027827 + L2 LINE L2 2348 3166 -147 1359 279 39 2 chr18 30649763 30650196 -56027352 + L1 LINE L1 2343 2791 -4705 1702 224 28 31 chr18 30650226 30650801 -56026747 + L1 LINE L1 3027 3599 -3966 * 6345 183 17 39 chr18 30650788 30650809 -56026739 + L1 LINE L1 4907 4927 -2638 192 40 0 0 chr18 30650809 30650834 -56026714 + (CAAA)n Simple_repeat Simple_repeat 1 25 0 6345 183 17 39 chr18 30650834 30652252 -56025296 + L1 LINE L1 4927 6314 -1251 680 196 98 12 chr18 30652248 30652411 -56025137 + L1MB3 LINE L1 5997 6173 -10 * 218 273 29 65 chr18 30652607 30652746 -56024802 - L2 LINE L2 -1366 1948 1815 248 391 8 0 chr18 30653592 30653725 -56023823 + L2 LINE L2 2606 2739 -575 219 218 0 36 chr18 30654039 30654094 -56023454 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 267 79 0 0 chr18 30654120 30654158 -56023390 + (TG)n Simple_repeat Simple_repeat 1 38 0 1918 123 32 0 chr18 30654303 30654587 -56022961 + AluSx SINE Alu 1 293 -19 440 376 37 62 chr18 30654588 30655107 -56022441 + L1MEc LINE L1 442 947 -5774 895 231 43 5 chr18 30655130 30655338 -56022210 - AluJo SINE Alu -10 302 87 1632 256 109 42 chr18 30655491 30656062 -56021486 - MLT1E2 LTR MaLR 0 626 18 330 168 56 0 chr18 30656222 30656329 -56021219 + (TA)n Simple_repeat Simple_repeat 1 113 0 515 333 55 11 chr18 30656329 30656905 -56020643 + L1MEc LINE L1 1281 1866 -4674 984 243 57 53 chr18 30656955 30657449 -56020099 + L1MEc LINE L1 3221 3716 -2824 572 227 87 15 chr18 30657500 30657764 -56019784 + L1MEc LINE L1 4615 4897 -1643 29 0 0 0 chr18 30657832 30657861 -56019687 + AT_rich Low_complexity Low_complexity 1 29 0 1817 139 0 11 chr18 30657869 30658178 -56019370 + AluSx SINE Alu 14 312 0 1655 231 79 18 chr18 30659283 30659738 -56017810 + MLT1D LTR MaLR 23 505 0 4929 206 62 13 chr18 30659809 30661702 -56015846 - L1PA11 LINE L1 -9 6165 4125 1709 154 69 50 chr18 30661847 30662211 -56015337 + THE1C LTR MaLR 5 375 0 6357 171 46 14 chr18 30662211 30663568 -56013980 + THE1C-int LTR MaLR 1 1605 -46 1665 157 70 39 chr18 30663577 30663934 -56013614 - LTR10A LTR ERV1 -61 548 181 392 245 240 0 chr18 30663947 30664151 -56013397 - LTR10A LTR ERV1 -356 253 1 11546 110 22 75 chr18 30664154 30668507 -56009041 - Harlequin LTR ERV1 -4 6645 704 793 236 82 121 chr18 30668645 30669366 -56008182 - Harlequin LTR ERV1 -5956 693 1 1606 186 186 26 chr18 30669375 30669837 -56007711 - LTR10A LTR ERV1 -61 548 13 1593 153 68 44 chr18 30669899 30670265 -56007283 + THE1C LTR MaLR 1 375 0 597 319 11 59 chr18 30670770 30671040 -56006508 + LTR16B LTR ERVL 1 257 -207 243 310 101 16 chr18 30672177 30672306 -56005242 - MIR SINE MIR -58 204 65 2289 80 3 7 chr18 30672799 30673101 -56004447 - AluY SINE Alu -10 301 1 2037 128 3 0 chr18 30673551 30673847 -56003701 - AluSx SINE Alu -2 310 14 637 299 79 45 chr18 30674767 30675289 -56002259 - L1ME3A LINE L1 -301 5869 5297 22 56 0 0 chr18 30675698 30675734 -56001814 + AT_rich Low_complexity Low_complexity 1 36 0 24 67 0 0 chr18 30675887 30675932 -56001616 + AT_rich Low_complexity Low_complexity 1 45 0 397 294 68 37 chr18 30675935 30676377 -56001171 + L1ME3A LINE L1 4536 4997 -1149 399 251 39 59 chr18 30676659 30676862 -56000686 + L1ME3A LINE L1 5753 5951 -219 24 53 0 0 chr18 30677094 30677132 -56000416 + AT_rich Low_complexity Low_complexity 1 38 0 232 47 0 78 chr18 30677241 30677305 -56000243 + (TTTA)n Simple_repeat Simple_repeat 4 62 0 2147 129 3 0 chr18 30677924 30678235 -55999313 - AluSx SINE Alu 0 312 1 30 59 0 0 chr18 30678387 30678438 -55999110 + AT_rich Low_complexity Low_complexity 1 51 0 25 0 0 0 chr18 30680284 30680309 -55997239 + AT_rich Low_complexity Low_complexity 1 25 0 5332 270 49 15 chr18 30680335 30682496 -55995052 + L1ME LINE L1 2110 4342 -1804 2194 119 0 7 chr18 30682523 30682833 -55994715 + AluSq SINE Alu 1 308 -5 274 279 135 44 chr18 30682844 30683163 -55994385 + L1ME LINE L1 5521 5868 -253 2080 139 0 0 chr18 30684013 30684308 -55993240 - AluSx SINE Alu -17 295 1 31 82 0 0 chr18 30684362 30684435 -55993113 + AT_rich Low_complexity Low_complexity 1 73 0 23 54 0 0 chr18 30686355 30686392 -55991156 + AT_rich Low_complexity Low_complexity 1 37 0 206 150 25 0 chr18 30687082 30687122 -55990426 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 2035 131 14 0 chr18 30687172 30687469 -55990079 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr18 30688206 30688227 -55989321 + AT_rich Low_complexity Low_complexity 1 21 0 264 301 53 30 chr18 30689305 30689438 -55988110 + MER5B DNA MER1_type 1 136 -42 1856 234 32 28 chr18 30689552 30690090 -55987458 - L1MB8 LINE L1 -14 6975 6436 629 238 91 4 chr18 30690057 30690288 -55987260 - L1MB8 LINE L1 -1555 5402 5152 * 1477 152 138 3 chr18 30690289 30690572 -55986976 + MER39B LTR ERV1 1 321 -332 990 227 88 78 chr18 30690622 30690996 -55986552 + MLT1B LTR MaLR 1 378 -12 897 254 50 88 chr18 30691008 30691655 -55985893 - L1MB8 LINE L1 -2535 4422 3801 537 16 0 0 chr18 30691819 30691881 -55985667 + (TG)n Simple_repeat Simple_repeat 2 63 0 2405 287 54 29 chr18 30692254 30693164 -55984384 - L1MB8 LINE L1 -5914 945 13 427 296 7 53 chr18 30693236 30693388 -55984160 - MER5B DNA MER1_type -30 148 4 35 24 0 0 chr18 30693596 30693638 -55983910 + AT_rich Low_complexity Low_complexity 1 42 0 275 179 0 13 chr18 30694512 30694590 -55982958 + CT-rich Low_complexity Low_complexity 1 77 0 2213 119 3 0 chr18 30694893 30695203 -55982345 + AluSp SINE Alu 3 313 0 26 0 0 0 chr18 30695785 30695811 -55981737 + AT_rich Low_complexity Low_complexity 1 26 0 368 202 39 39 chr18 30696221 30696325 -55981223 + MER21B LTR ERV1 3 106 -757 * 3600 211 48 33 chr18 30696323 30697144 -55980404 + MER21B LTR ERV1 19 851 -12 1597 145 123 33 chr18 30697419 30697751 -55979797 + THE1B LTR MaLR 1 362 -2 7288 121 16 41 chr18 30697753 30698929 -55978619 + THE1B-int LTR MaLR 1 1147 -433 691 107 0 9 chr18 30698932 30699044 -55978504 + THE1B-int LTR MaLR 1470 1580 0 1866 142 54 26 chr18 30699046 30699398 -55978150 + THE1B LTR MaLR 3 364 0 612 297 171 37 chr18 30700486 30701175 -55976373 - L2 LINE L2 0 3313 2532 366 94 0 0 chr18 30701175 30701228 -55976320 + MADE1 DNA Mariner 1 53 -27 828 81 37 19 chr18 30701760 30701921 -55975627 + GA-rich Low_complexity Low_complexity 4 167 0 2061 105 39 0 chr18 30703972 30704257 -55973291 - AluSc SINE Alu -13 296 1 299 327 65 0 chr18 30704764 30704871 -55972677 + MER34 LTR ERV1 1 114 -428 1231 135 10 121 chr18 30704893 30705182 -55972366 + LTR29 LTR ERV1 162 418 -204 4112 156 30 6 chr18 30705182 30705887 -55971661 + MER50 LTR ERV1 1 722 -12 1030 198 5 25 chr18 30705922 30706070 -55971478 + LTR29 LTR ERV1 415 559 -63 5884 75 2 9 chr18 30706070 30706855 -55970693 - LTR17 LTR ERV1 0 780 1 1030 198 5 25 chr18 30706855 30706908 -55970640 + LTR29 LTR ERV1 559 612 -10 3033 163 75 3 chr18 30707138 30707714 -55969834 - LTR62 LTR ERVK -98 621 5 1135 251 26 83 chr18 30707802 30708188 -55969360 - MER45R DNA AcHobo -1184 397 34 349 253 92 51 chr18 30708392 30708647 -55968901 - L1ME3A LINE L1 -318 5844 5567 299 313 102 31 chr18 30709249 30709572 -55967976 - L1MEd LINE L1 -4879 1240 895 350 115 0 0 chr18 30709691 30709752 -55967796 - MLT2B1 LTR ERVL 0 520 460 263 70 0 23 chr18 30709797 30709840 -55967708 + (TAGA)n Simple_repeat Simple_repeat 2 43 0 5103 187 50 53 chr18 30709885 30711175 -55966373 - L1M4c LINE L1 -5097 1287 2 33 80 0 0 chr18 30711175 30711250 -55966298 + AT_rich Low_complexity Low_complexity 1 75 0 2127 94 0 44 chr18 30711567 30711865 -55965683 - AluSg SINE Alu -13 297 13 413 323 36 36 chr18 30712137 30712332 -55965216 + L2 LINE L2 2559 2753 -561 21 36 0 0 chr18 30712442 30712470 -55965078 + AT_rich Low_complexity Low_complexity 1 28 0 401 311 34 0 chr18 30712849 30712968 -55964580 - L2 LINE L2 -1 3312 3190 2187 109 0 7 chr18 30713821 30714114 -55963434 - AluSg SINE Alu -19 291 1 1527 191 7 27 chr18 30715394 30715692 -55961856 - AluJo SINE Alu -20 292 1 4232 218 49 32 chr18 30715699 30717235 -55960313 - L1MD2 LINE L1 -10 6349 4781 983 223 54 9 chr18 30717239 30717463 -55960085 - MLT1A1 LTR MaLR -6 359 126 1178 275 141 9 chr18 30717484 30718052 -55959496 - L1MD2 LINE L1 -1361 4785 4143 38 22 0 0 chr18 30718184 30718229 -55959319 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr18 30719016 30719038 -55958510 + AT_rich Low_complexity Low_complexity 1 22 0 1940 100 16 22 chr18 30719670 30719981 -55957567 - AluSc SINE Alu 0 309 1 1418 232 0 9 chr18 30719989 30720304 -55957244 - AluJo SINE Alu 0 312 1 2242 95 3 22 chr18 30720419 30720556 -55956992 + AluY SINE Alu 1 139 -172 2048 89 3 34 chr18 30720556 30720883 -55956665 + AluY SINE Alu 1 318 0 2242 95 3 22 chr18 30720883 30721060 -55956488 + AluY SINE Alu 139 310 -1 450 252 72 55 chr18 30721061 30721422 -55956126 + L1MEc LINE L1 1110 1476 -4920 21 82 0 0 chr18 30721861 30721910 -55955638 + AT_rich Low_complexity Low_complexity 1 49 0 1863 153 94 24 chr18 30723536 30723876 -55953672 + THE1B LTR MaLR 1 364 0 1108 190 8 76 chr18 30724215 30724478 -55953070 - AluJo SINE Alu -67 245 1 1952 225 40 54 chr18 30725359 30725915 -55951633 - MER44D DNA MER2_type 0 605 3 643 302 131 39 chr18 30726386 30726820 -55950728 - MLT1J LTR MaLR -35 476 3 2050 203 63 24 chr18 30727271 30727729 -55949819 - LTR22 LTR ERVK -33 476 1 12176 101 4 2 chr18 30727729 30729408 -55948140 - HERVK22 LTR ERVK 0 6837 5156 10646 96 6 4 chr18 30729405 30730857 -55946691 - HERVK22 LTR ERVK -5382 1455 1 * 2154 189 61 26 chr18 30730858 30731349 -55946199 - LTR22 LTR ERVK -1 508 1 2001 135 7 0 chr18 30732634 30732930 -55944618 + AluSq SINE Alu 1 298 -15 266 259 165 0 chr18 30733844 30733929 -55943619 - MIR SINE MIR -162 100 2 396 0 0 0 chr18 30734593 30734637 -55942911 + (CA)n Simple_repeat Simple_repeat 2 45 0 1407 228 0 16 chr18 30734965 30735268 -55942280 - AluJo SINE Alu -14 298 1 260 261 68 80 chr18 30735302 30735551 -55941997 - HAL1 LINE L1 -15 2492 2247 528 292 91 18 chr18 30735598 30735872 -55941676 - HAL1 LINE L1 -2168 339 46 238 360 0 12 chr18 30736088 30736174 -55941374 + MIR SINE MIR 61 145 -63 2058 92 4 4 chr18 30736223 30736527 -55941021 + AluY SINE Alu 1 304 0 267 31 0 0 chr18 30737168 30737200 -55940348 + (TTA)n Simple_repeat Simple_repeat 2 33 0 801 263 11 5 chr18 30737426 30737612 -55939936 + MLT1E1 LTR MaLR 468 654 0 667 310 77 83 chr18 30737644 30738282 -55939266 + L1MEc LINE L1 1170 1803 -4593 475 315 61 55 chr18 30738289 30738635 -55938913 + L1MEc LINE L1 1866 2213 -4183 302 275 82 21 chr18 30738647 30738978 -55938570 + L1MEc LINE L1 2189 2539 -3676 271 290 28 19 chr18 30739127 30739234 -55938314 + L1MEc LINE L1 2785 2892 -3323 445 342 67 19 chr18 30739354 30739667 -55937881 + L1MEc LINE L1 3186 3513 -2702 33 0 0 0 chr18 30739872 30739905 -55937643 + AT_rich Low_complexity Low_complexity 1 33 0 1024 193 65 49 chr18 30740674 30740908 -55936640 + LTR48 LTR ERV1 121 326 -216 2192 102 0 0 chr18 30740908 30741219 -55936329 + AluSg SINE Alu 1 311 0 1024 193 65 49 chr18 30741219 30741440 -55936108 + LTR48 LTR ERV1 326 542 0 1777 245 146 38 chr18 30743630 30744372 -55933176 + L1MC3 LINE L1 6507 7328 -457 707 255 90 11 chr18 30744382 30744660 -55932888 + L1MD3 LINE L1 7690 7989 -6 23 54 0 0 chr18 30744968 30745005 -55932543 + AT_rich Low_complexity Low_complexity 1 37 0 240 35 0 0 chr18 30745382 30745411 -55932137 + (TG)n Simple_repeat Simple_repeat 1 29 0 1731 167 3 35 chr18 30745663 30745980 -55931568 - AluJb SINE Alu -5 307 1 1831 288 26 21 chr18 30746342 30746915 -55930633 + L2 LINE L2 2053 2628 -686 826 279 52 78 chr18 30747177 30747603 -55929945 + L2 LINE L2 2895 3309 -4 1614 161 55 68 chr18 30748532 30748912 -55928636 - THE1C LTR MaLR 0 375 1 306 217 108 12 chr18 30750611 30750694 -55926854 - L1MC4a LINE L1 -1852 5956 5866 382 244 47 53 chr18 30750744 30750927 -55926621 + MLT1H1 LTR MaLR 16 198 -369 23 33 0 0 chr18 30751232 30751262 -55926286 + AT_rich Low_complexity Low_complexity 1 30 0 21 71 0 0 chr18 30752897 30752939 -55924609 + AT_rich Low_complexity Low_complexity 1 42 0 1484 220 37 22 chr18 30753098 30753453 -55924095 - MLT1A2 LTR MaLR 0 374 15 30 0 0 0 chr18 30754477 30754507 -55923041 + AT_rich Low_complexity Low_complexity 1 30 0 234 275 54 27 chr18 30754553 30754702 -55922846 + L1ME LINE L1 5714 5866 -255 276 210 13 25 chr18 30754752 30754909 -55922639 + (TA)n Simple_repeat Simple_repeat 1 155 0 3308 254 101 43 chr18 30755011 30756748 -55920800 - Charlie2a DNA MER1_type -785 2077 240 7943 209 52 15 chr18 30759009 30760061 -55917487 + L1MC3 LINE L1 5734 6890 -895 2142 126 3 0 chr18 30760061 30760370 -55917178 - AluSx SINE Alu -2 310 1 7943 209 52 15 chr18 30760370 30761232 -55916316 + L1MC3 LINE L1 6890 7719 -66 23 54 0 0 chr18 30761238 30761275 -55916273 + AT_rich Low_complexity Low_complexity 1 37 0 207 328 44 28 chr18 30761571 30761751 -55915797 - L2 LINE L2 -1222 2092 1910 2371 124 3 19 chr18 30762169 30762539 -55915009 - THE1B LTR MaLR 0 364 1 223 343 137 0 chr18 30762539 30762714 -55914834 - MIR SINE MIR -8 254 56 266 380 100 37 chr18 30762796 30763423 -55914125 + L2 LINE L2 2375 3033 -239 1015 163 5 40 chr18 30763467 30763669 -55913879 - L1MC3 LINE L1 -290 7495 7301 21 0 0 0 chr18 30764237 30764258 -55913290 + AT_rich Low_complexity Low_complexity 1 21 0 2044 135 7 0 chr18 30764982 30765286 -55912262 - AluSx SINE Alu -4 308 3 380 253 32 52 chr18 30765981 30766135 -55911413 - MER5B DNA MER1_type -21 157 7 297 0 0 0 chr18 30766182 30766215 -55911333 + (TG)n Simple_repeat Simple_repeat 1 33 0 191 256 0 0 chr18 30766458 30766501 -55911047 - MER5A DNA MER1_type -138 51 9 462 309 12 24 chr18 30766569 30766737 -55910811 - MER5B DNA MER1_type -6 172 7 22 56 0 0 chr18 30767420 30767456 -55910092 + AT_rich Low_complexity Low_complexity 1 36 0 31 44 0 0 chr18 30767811 30767856 -55909692 + AT_rich Low_complexity Low_complexity 1 45 0 25 51 0 0 chr18 30768360 30768399 -55909149 + AT_rich Low_complexity Low_complexity 1 39 0 317 350 21 7 chr18 30769111 30769251 -55908297 + MER117 DNA MER1_type 25 166 -31 22 35 0 0 chr18 30769482 30769511 -55908037 + AT_rich Low_complexity Low_complexity 1 29 0 343 317 20 0 chr18 30769806 30769907 -55907641 + MIR SINE MIR 91 193 -69 330 26 0 0 chr18 30770028 30770067 -55907481 + (CAT)n Simple_repeat Simple_repeat 1 39 0 289 291 70 0 chr18 30770077 30770163 -55907385 - MIR SINE MIR -15 247 156 2148 74 0 74 chr18 30770357 30770693 -55906855 - AluY SINE Alu 0 311 1 1269 181 31 3 chr18 30771079 30771366 -55906182 + L1MA8 LINE L1 5997 6291 0 225 216 81 0 chr18 30773034 30773108 -55904440 + LTR68 LTR ERV1 1 80 -660 22 0 0 0 chr18 30773220 30773242 -55904306 + AT_rich Low_complexity Low_complexity 1 22 0 1961 125 0 4 chr18 30773255 30773565 -55903983 + AluSg SINE Alu 4 312 0 584 213 51 41 chr18 30774129 30774326 -55903222 + LTR37A LTR ERV1 219 417 -9 374 222 11 0 chr18 30774346 30774436 -55903112 - L1MD1 LINE L1 -140 6102 6012 1852 348 133 7 chr18 30774440 30775091 -55902457 - L1MA9 LINE L1 -30 6282 5632 2908 243 53 41 chr18 30775091 30777539 -55900009 - L1MD1 LINE L1 -175 6461 4042 1949 98 7 44 chr18 30777539 30777874 -55899674 - AluSq SINE Alu 0 324 1 2908 243 53 41 chr18 30777874 30778235 -55899313 - L1MD1 LINE L1 -2594 4042 3687 2145 147 44 5 chr18 30778235 30778623 -55898925 - MER57A LTR ERV1 0 403 1 2908 243 53 41 chr18 30778623 30779357 -55898191 - L1MD1 LINE L1 -2949 3687 16 5575 119 27 6 chr18 30779694 30780578 -55896970 - L1PA8A LINE L1 -895 5251 4349 6280 87 1 11 chr18 30780584 30781471 -55896077 + L1PA8A LINE L1 5254 6131 0 1287 194 33 10 chr18 30782063 30782362 -55895186 + L1MA10 LINE L1 6016 6321 -13 670 301 30 60 chr18 30783994 30784363 -55893185 + MER31-int LTR ERV1 3665 4022 -914 639 133 9 19 chr18 30834416 30834521 -55843027 - THE1B LTR MaLR -260 104 1 2207 157 59 10 chr18 30834627 30835035 -55842513 + MSTA LTR MaLR 1 428 0 1726 147 14 10 chr18 30835039 30835332 -55842216 + MSTA-int LTR MaLR 5 298 -1353 4779 215 15 11 chr18 30835332 30836285 -55841263 + MSTA-int LTR MaLR 440 1395 -256 266 241 11 0 chr18 30836497 30836584 -55840964 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 0 0 0 chr18 30837219 30837245 -55840303 + AT_rich Low_complexity Low_complexity 1 26 0 274 309 57 95 chr18 30837302 30837564 -55839984 + L2 LINE L2 2128 2379 -935 291 54 0 0 chr18 30837574 30837611 -55839937 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 226 300 40 30 chr18 30838662 30838762 -55838786 - Charlie7 DNA MER1_type -2042 570 470 2213 81 0 3 chr18 30838962 30839245 -55838303 - AluY SINE Alu -14 297 16 26 93 0 0 chr18 30839733 30839808 -55837740 + AT_rich Low_complexity Low_complexity 1 75 0 2041 132 0 16 chr18 30840142 30840445 -55837103 - AluSg SINE Alu -12 298 1 28 0 0 0 chr18 30841444 30841472 -55836076 + AT_rich Low_complexity Low_complexity 1 28 0 1006 137 11 34 chr18 30841809 30841984 -55835564 + THE1B LTR MaLR 194 364 0 5428 112 8 9 chr18 30841985 30842779 -55834769 + THE1B-int LTR MaLR 2 794 -786 3748 159 94 21 chr18 30842783 30843549 -55833999 - LTR12 LTR ERV1 0 826 5 5352 135 10 28 chr18 30843686 30844617 -55832931 + L1MA3 LINE L1 5392 6305 0 1633 238 19 11 chr18 30844711 30845073 -55832475 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr18 30845474 30845496 -55832052 + AT_rich Low_complexity Low_complexity 1 22 0 227 298 132 30 chr18 30845606 30845807 -55831741 + MIR SINE MIR 30 248 -14 189 0 0 0 chr18 30846022 30846043 -55831505 + (A)n Simple_repeat Simple_repeat 1 21 0 2611 268 48 23 chr18 30846049 30847111 -55830437 + L1M4 LINE L1 3520 4608 -1538 409 217 12 0 chr18 30847142 30847225 -55830323 + AluJ/FRAM SINE Alu 217 300 -2 2203 262 41 47 chr18 30847633 30848323 -55829225 + L1M1 LINE L1 2125 2817 -4748 1662 192 13 3 chr18 30848323 30848630 -55828918 + AluJb SINE Alu 1 310 -2 2203 262 41 47 chr18 30848630 30849317 -55828231 + L1M1 LINE L1 2817 3506 -4059 417 181 0 0 chr18 30849325 30849408 -55828140 + L1M1 LINE L1 4751 4833 -2732 1206 171 28 16 chr18 30849410 30849662 -55827886 - MER39 LTR ERV1 0 707 453 275 214 14 29 chr18 30849662 30849732 -55827816 + Tigger2 DNA MER2_type 1 69 -2649 * 2175 152 23 28 chr18 30849730 30850119 -55827429 + Tigger2 DNA MER2_type 2280 2666 -52 228 279 104 93 chr18 30850385 30850568 -55826980 + L2 LINE L2 3127 3311 -2 289 204 29 29 chr18 30850909 30851046 -55826502 + (TA)n Simple_repeat Simple_repeat 1 137 0 260 208 19 0 chr18 30852241 30852294 -55825254 + MLT1H1 LTR MaLR 2 55 -500 901 275 44 9 chr18 30852361 30852805 -55824743 + MLT1E2-int LTR MaLR 22 602 -769 545 331 6 0 chr18 30853009 30853178 -55824370 + MLT1E2-int LTR MaLR 691 860 -511 256 324 20 0 chr18 30853349 30853451 -55824097 + MLT1E2-int LTR MaLR 983 1086 -285 610 264 143 0 chr18 30853556 30853772 -55823776 - MLT1A2 LTR MaLR -127 247 1 248 167 93 0 chr18 30853775 30853829 -55823719 - MLT1C LTR MaLR -378 89 31 801 256 46 148 chr18 30853866 30854304 -55823244 + MLT1E2 LTR MaLR 113 626 0 384 65 65 0 chr18 30854663 30854725 -55822823 + MLT1H1 LTR MaLR 490 555 0 432 285 65 61 chr18 30855152 30855398 -55822150 + LTR40a LTR ERVL 192 438 -81 267 152 0 0 chr18 30855406 30855452 -55822096 + (TG)n Simple_repeat Simple_repeat 1 46 0 7871 175 24 14 chr18 30855921 30857292 -55820256 + L1 LINE L1 10 1771 -5794 204 40 0 0 chr18 30857292 30857317 -55820231 + (GA)n Simple_repeat Simple_repeat 2 26 0 7871 175 24 14 chr18 30857317 30857987 -55819561 + L1 LINE L1 1771 2433 -5132 7437 118 19 30 chr18 30858022 30858048 -55819500 + L1 LINE L1 2414 2439 -5126 1965 174 78 29 chr18 30858048 30858286 -55819262 - MSTA LTR MaLR 0 428 160 2213 82 14 7 chr18 30858286 30858577 -55818971 - AluY SINE Alu -18 293 1 1965 174 78 29 chr18 30858577 30858746 -55818802 - MSTA LTR MaLR -268 160 1 7437 118 19 30 chr18 30858746 30860180 -55817368 + L1 LINE L1 2439 3860 -3705 263 177 0 127 chr18 30860182 30860261 -55817287 - pTR5 LTR ERV1 -1562 876 808 5561 197 61 24 chr18 30860362 30861680 -55815868 + L1 LINE L1 5192 6558 -1007 689 303 77 23 chr18 30861799 30862822 -55814726 - L1MEc LINE L1 -3564 2818 1781 22 0 0 0 chr18 30862854 30862876 -55814672 + AT_rich Low_complexity Low_complexity 1 22 0 301 330 54 1 chr18 30862910 30863144 -55814404 - L1MEc LINE L1 -4790 1745 1342 34 65 0 0 chr18 30863144 30863206 -55814342 + AT_rich Low_complexity Low_complexity 1 62 0 23 33 0 0 chr18 30864233 30864263 -55813285 + AT_rich Low_complexity Low_complexity 1 30 0 5661 177 17 17 chr18 30865450 30866530 -55811018 + L1MC1 LINE L1 5254 6333 0 568 330 120 42 chr18 30866530 30866964 -55810584 - L2 LINE L2 -410 2904 2437 824 96 0 0 chr18 30867135 30867250 -55810298 - THE1A LTR MaLR -240 115 1 9940 218 121 12 chr18 30867251 30870593 -55806955 - L1P4 LINE L1 -399 7204 3486 4819 282 36 36 chr18 30870693 30872503 -55805045 - L1P4 LINE L1 -4704 2877 1068 1117 16 0 0 chr18 30872634 30872762 -55804786 + L1PA5 LINE L1 6019 6146 -8 28 86 0 0 chr18 30873003 30873073 -55804475 + AT_rich Low_complexity Low_complexity 1 70 0 226 357 36 0 chr18 30873191 30873275 -55804273 - MIR SINE MIR -96 166 80 53 73 0 0 chr18 30873374 30873483 -55804065 + AT_rich Low_complexity Low_complexity 1 109 0 5528 130 5 3 chr18 30873503 30874917 -55802631 - L1PA14 LINE L1 -4 6157 4739 2125 126 0 0 chr18 30875225 30875518 -55802030 - AluSc SINE Alu -8 301 9 2442 192 47 66 chr18 30875558 30876182 -55801366 + LTR9 LTR ERV1 1 612 0 375 320 136 39 chr18 30876492 30876780 -55800768 - L2 LINE L2 -4 3309 2984 655 317 63 23 chr18 30876780 30877222 -55800326 - LTR16B LTR ERVL -4 460 1 375 320 136 39 chr18 30877222 30877264 -55800284 - L2 LINE L2 -329 2984 2947 567 164 10 10 chr18 30877273 30877377 -55800171 + MLT1A1 LTR MaLR 1 104 -261 1167 186 68 20 chr18 30877379 30877631 -55799917 - MSTB LTR MaLR -2 424 161 420 315 93 6 chr18 30877861 30878023 -55799525 - LTR16B LTR ERVL -91 373 198 1247 158 77 4 chr18 30878026 30878260 -55799288 + MST-int LTR MaLR 1401 1651 0 5526 217 17 27 chr18 30878324 30880508 -55797040 + L1MA4 LINE L1 3609 5762 -538 545 186 0 156 chr18 30880507 30880738 -55796810 + L1MA4 LINE L1 6061 6255 -45 * 735 211 27 7 chr18 30880739 30880912 -55796636 + FRAM SINE Alu 1 176 0 1623 97 127 19 chr18 30881265 30881532 -55796016 + AluSg1 SINE Alu 2 297 -12 22 0 0 0 chr18 30882003 30882025 -55795523 + AT_rich Low_complexity Low_complexity 1 22 0 2423 152 67 20 chr18 30882390 30882850 -55794698 - L1PA15 LINE L1 -1 6815 6334 14878 227 14 16 chr18 30882986 30883403 -55794145 - L1PA15 LINE L1 -965 5832 5416 216 0 0 0 chr18 30883403 30883427 -55794121 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 14878 227 14 16 chr18 30883427 30886686 -55790862 - L1PA15 LINE L1 -1381 5416 2162 867 128 0 0 chr18 30886848 30886989 -55790559 + (GGAA)n Simple_repeat Simple_repeat 4 144 0 316 271 36 78 chr18 30887518 30887684 -55789864 - Charlie8 DNA MER1_type -2137 280 122 310 399 29 6 chr18 30887993 30888166 -55789382 + L1M3c LINE L1 958 1134 -5964 1803 262 50 25 chr18 30888877 30889816 -55787732 + L1M3c LINE L1 1546 2525 -4573 1205 205 0 0 chr18 30889822 30890027 -55787521 + AluJo SINE Alu 6 210 -102 2290 268 75 29 chr18 30890028 30890599 -55786949 + L1MA1 LINE L1 2591 3134 -4431 2232 112 0 10 chr18 30890599 30890912 -55786636 + AluSx SINE Alu 3 312 0 2290 268 75 29 chr18 30890912 30891128 -55786420 + L1MA1 LINE L1 3134 3339 -4226 1920 150 0 79 chr18 30891128 30891331 -55786217 + MER1B DNA MER1_type 1 165 -2545 2197 93 7 0 chr18 30891331 30891638 -55785910 - AluSg SINE Alu 0 309 1 1920 150 0 79 chr18 30891638 30891799 -55785749 + MER1B DNA MER1_type 165 337 0 2290 268 75 29 chr18 30891799 30892746 -55784802 + L1MA1 LINE L1 3339 4389 -3176 3093 228 59 27 chr18 30892848 30893590 -55783958 - L1PA15 LINE L1 -6021 766 1 26 0 0 0 chr18 30893595 30893621 -55783927 + AT_rich Low_complexity Low_complexity 1 26 0 2387 88 0 3 chr18 30895864 30896172 -55781376 - AluSc SINE Alu -2 307 1 21 0 0 0 chr18 30896701 30896722 -55780826 + AT_rich Low_complexity Low_complexity 1 21 0 1776 110 11 4 chr18 30897796 30898059 -55779489 + THE1B-int LTR MaLR 1316 1580 0 1807 162 25 27 chr18 30898059 30898424 -55779124 + THE1B LTR MaLR 1 364 0 22 0 0 0 chr18 30898934 30898956 -55778592 + AT_rich Low_complexity Low_complexity 1 22 0 191 313 125 18 chr18 30899111 30899223 -55778325 + MIR SINE MIR 103 226 -36 2441 75 0 0 chr18 30900349 30900657 -55776891 - AluY SINE Alu -3 308 1 691 229 7 0 chr18 30902374 30902518 -55775030 + L1MA9 LINE L1 5652 5796 -375 388 80 21 80 chr18 30902618 30902806 -55774742 + (TATAA)n Simple_repeat Simple_repeat 1 177 0 27 29 0 0 chr18 30902807 30902841 -55774707 + AT_rich Low_complexity Low_complexity 1 34 0 445 104 52 40 chr18 30902841 30903014 -55774534 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 372 75 106 6 chr18 30902978 30903139 -55774409 + (TA)n Simple_repeat Simple_repeat 1 177 0 * 519 243 13 7 chr18 30903160 30903312 -55774236 + L1MA1 LINE L1 4766 4918 -2647 2274 193 37 16 chr18 30903402 30903910 -55773638 + L1MA9 LINE L1 5792 6310 -2 1967 104 7 0 chr18 30904184 30904463 -55773085 - AluY SINE Alu -30 281 1 237 33 0 0 chr18 30904969 30904999 -55772549 + (GA)n Simple_repeat Simple_repeat 1 30 0 2283 88 7 0 chr18 30905757 30906051 -55771497 - AluSc SINE Alu -13 296 1 22 70 0 0 chr18 30906921 30906964 -55770584 + AT_rich Low_complexity Low_complexity 1 43 0 646 321 37 23 chr18 30907178 30907396 -55770152 + MIR SINE MIR 32 252 -10 6819 157 26 7 chr18 30907431 30909593 -55767955 + L1MA1 LINE L1 5450 7721 0 971 229 14 9 chr18 30909657 30909875 -55767673 - MER58A DNA MER1_type -2 222 4 2009 144 35 32 chr18 30910813 30911161 -55766387 + THE1B LTR MaLR 1 349 -15 10018 116 55 2 chr18 30911161 30912662 -55764886 + THE1B-int LTR MaLR 1 1580 0 1986 131 6 29 chr18 30912662 30912976 -55764572 + THE1B LTR MaLR 1 307 -57 370 181 12 48 chr18 30913083 30913166 -55764382 + THE1B LTR MaLR 276 355 0 243 157 0 0 chr18 30913181 30913232 -55764316 + (TCTG)n Simple_repeat Simple_repeat 2 52 0 213 132 0 0 chr18 30913236 30913274 -55764274 + (CA)n Simple_repeat Simple_repeat 1 38 0 32 0 0 0 chr18 30913429 30913461 -55764087 + AT_rich Low_complexity Low_complexity 1 32 0 401 306 96 15 chr18 30914070 30914300 -55763248 + MIR SINE MIR 8 252 -10 186 314 20 0 chr18 30915326 30915377 -55762171 - L2 LINE L2 -8 3305 3254 590 204 0 9 chr18 30915405 30915562 -55761986 + FLAM_A SINE Alu 4 159 0 21 71 0 0 chr18 30915741 30915783 -55761765 + AT_rich Low_complexity Low_complexity 1 42 0 2984 158 17 15 chr18 30915895 30916414 -55761134 - L1MC1 LINE L1 -18 6315 5796 915 222 106 94 chr18 30916419 30916931 -55760617 + MER66A LTR ERV1 97 469 -9 488 211 16 8 chr18 30916935 30917058 -55760490 - L1MC1 LINE L1 -549 5784 5661 635 184 61 37 chr18 30917125 30917288 -55760260 + LTR52 LTR ERVL 8 174 -247 3093 251 66 27 chr18 30917328 30918549 -55758999 + L1MC3 LINE L1 4997 5401 -745 2069 120 3 46 chr18 30918628 30918953 -55758595 - AluSq SINE Alu 0 313 3 242 211 35 0 chr18 30918955 30919012 -55758536 + L1M4 LINE L1 4849 4907 -1239 3779 254 38 57 chr18 30919144 30921306 -55756242 + L1P3 LINE L1 10 2157 -4304 290 57 0 38 chr18 30921304 30921357 -55756191 - L1PA8 LINE L1 0 6172 6122 * 874 157 0 0 chr18 30921357 30921504 -55756044 - L1P LINE L1 -1222 4924 4778 * 1764 120 4 8 chr18 30921482 30921749 -55755799 - L1P LINE L1 -1788 4358 4093 6214 109 6 0 chr18 30921750 30922842 -55754706 + L1PA8 LINE L1 5061 6157 -15 2827 119 0 37 chr18 30922843 30923306 -55754242 + L1PA15 LINE L1 5719 6164 -1 7280 195 29 17 chr18 30923311 30924995 -55752553 + L1 LINE L1 3225 4928 -1218 425 100 0 0 chr18 30925112 30925172 -55752376 - AluSp/q SINE Alu -94 219 160 1989 108 4 7 chr18 30925230 30925509 -55752039 + AluSc SINE Alu 17 294 -15 429 252 30 8 chr18 30926527 30926658 -55750890 + MER94 DNA DNA 1 134 0 304 311 46 33 chr18 30927152 30927303 -55750245 + MER5A DNA MER1_type 36 188 -1 813 181 0 18 chr18 30927686 30927852 -55749696 + L1MC3 LINE L1 6963 7125 -660 825 196 36 0 chr18 30927856 30928024 -55749524 + L1MC3 LINE L1 7505 7678 -107 2206 180 12 17 chr18 30928027 30928774 -55748774 - MER54B LTR ERVL -2 791 7 471 102 46 93 chr18 30928778 30928886 -55748662 + L1MC3 LINE L1 7675 7777 -8 3949 135 17 6 chr18 30929200 30929837 -55747711 + LTR9B LTR ERV1 1 644 0 26 64 0 0 chr18 30931704 30931751 -55745797 + AT_rich Low_complexity Low_complexity 1 47 0 3138 158 46 28 chr18 30931934 30933155 -55744393 + L1P5 LINE L1 499 1742 -4462 13126 198 53 16 chr18 30933158 30934845 -55742703 + L1P5 LINE L1 1931 3554 -2657 258 32 0 0 chr18 30934845 30934876 -55742672 + (CAA)n Simple_repeat Simple_repeat 3 33 0 13126 198 53 16 chr18 30934876 30936013 -55741535 + L1P5 LINE L1 3554 4931 -1280 403 143 13 13 chr18 30936013 30936090 -55741458 - MADE1 DNA Mariner -2 78 2 13126 198 53 16 chr18 30936090 30936892 -55740656 + L1P5 LINE L1 4931 5702 -509 265 257 111 23 chr18 30937315 30937486 -55740062 + L1MC5 LINE L1 7632 7817 -144 6576 64 28 0 chr18 30937654 30938517 -55739031 - L1PA7 LINE L1 -1 6153 5277 189 0 0 0 chr18 30938517 30938538 -55739010 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 6576 64 28 0 chr18 30938538 30939080 -55738468 - L1PA7 LINE L1 -877 5277 4752 227 73 49 0 chr18 30939260 30939301 -55738247 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 2177 109 3 7 chr18 30940687 30940990 -55736558 - AluSx SINE Alu -10 302 1 387 335 89 38 chr18 30941065 30941117 -55736431 - LTR16A LTR ERVL 0 450 402 1007 366 26 57 chr18 30941117 30941502 -55736046 - MLT1A2 LTR MaLR 0 374 2 387 335 89 38 chr18 30941502 30941685 -55735863 - LTR16A LTR ERVL -48 402 203 21 0 0 0 chr18 30941918 30941939 -55735609 + AT_rich Low_complexity Low_complexity 1 21 0 203 410 26 0 chr18 30942195 30942312 -55735236 - L2 LINE L2 -212 3060 2941 305 319 109 79 chr18 30945065 30945497 -55732051 + LTR16A LTR ERVL 1 445 -5 220 195 0 0 chr18 30946154 30946195 -55731353 + GA-rich Low_complexity Low_complexity 4 44 0 31 58 0 0 chr18 30946296 30946348 -55731200 + AT_rich Low_complexity Low_complexity 1 52 0 2824 179 35 23 chr18 30946431 30947035 -55730513 - L1MA8 LINE L1 -220 6071 5461 2078 123 0 3 chr18 30947040 30947333 -55730215 + AluSx SINE Alu 5 296 -16 22 103 0 0 chr18 30947697 30947775 -55729773 + AT_rich Low_complexity Low_complexity 1 78 0 22 35 0 0 chr18 30947791 30947820 -55729728 + AT_rich Low_complexity Low_complexity 1 29 0 547 249 123 59 chr18 30948172 30948593 -55728955 + LTR37B LTR ERV1 6 453 -15 787 273 29 13 chr18 30949709 30949947 -55727601 - L1PA12 LINE L1 -7339 242 1 326 328 86 30 chr18 30949952 30950254 -55727294 - L1M4 LINE L1 -3651 2495 2177 720 270 88 17 chr18 30950503 30950855 -55726693 + LTR37A LTR ERV1 39 415 -11 27 0 0 0 chr18 30950897 30950924 -55726624 + AT_rich Low_complexity Low_complexity 1 27 0 348 272 10 10 chr18 30951121 30951224 -55726324 + L1ME3A LINE L1 6059 6161 -9 863 165 34 139 chr18 30951702 30951877 -55725671 - Tigger2a DNA MER2_type -2275 443 304 1841 161 0 0 chr18 30951877 30952162 -55725386 - AluSx SINE Alu -27 285 1 863 165 34 139 chr18 30952162 30952253 -55725295 - Tigger2a DNA MER2_type -2414 304 205 2923 221 11 17 chr18 30952292 30953043 -55724505 - L1 LINE L1 -1884 4262 3517 * 4113 182 14 9 chr18 30953041 30954631 -55722917 + L1PA16 LINE L1 4461 6111 -20 293 64 0 0 chr18 30954646 30954693 -55722855 + L1PA14 LINE L1 6115 6161 0 * 767 198 183 20 chr18 30954692 30954894 -55722654 + L1PA16 LINE L1 5923 6157 -9 1116 171 0 46 chr18 30954988 30955204 -55722344 - Tigger2a DNA MER2_type -225 209 4 458 219 61 26 chr18 30955938 30956052 -55721496 + MIR SINE MIR 23 140 -122 274 182 0 61 chr18 30956156 30956222 -55721326 - MIR SINE MIR -115 147 86 471 35 0 0 chr18 30957609 30957666 -55719882 + (CA)n Simple_repeat Simple_repeat 2 58 0 26 30 0 0 chr18 30957965 30957998 -55719550 + AT_rich Low_complexity Low_complexity 1 33 0 365 277 97 7 chr18 30958000 30958155 -55719393 - MIR SINE MIR -2 260 92 22 70 0 0 chr18 30958164 30958207 -55719341 + AT_rich Low_complexity Low_complexity 1 43 0 333 68 0 0 chr18 30959716 30959760 -55717788 + (TATG)n Simple_repeat Simple_repeat 4 47 0 1492 204 118 6 chr18 30960255 30960618 -55716930 - MER39B LTR ERV1 -249 404 1 7539 199 46 44 chr18 30960618 30961036 -55716512 + L1MB1 LINE L1 3413 3829 -2339 266 226 0 0 chr18 30961036 30961089 -55716459 - MLT1A2 LTR MaLR -2 372 320 7539 199 46 44 chr18 30961089 30962298 -55715250 + L1MB1 LINE L1 3829 5088 -1080 1600 194 0 7 chr18 30962298 30962592 -55714956 + AluJb SINE Alu 10 301 -11 7539 199 46 44 chr18 30962592 30963668 -55713880 + L1MB1 LINE L1 5088 6161 -7 2309 107 0 0 chr18 30965048 30965357 -55712191 - AluSg SINE Alu -1 309 1 343 373 76 21 chr18 30965559 30965710 -55711838 + MIR SINE MIR 12 182 -80 2122 174 55 30 chr18 30965710 30966182 -55711366 + MER66B LTR ERV1 3 486 0 343 373 76 21 chr18 30966182 30966266 -55711282 + MIR SINE MIR 182 260 -2 199 284 37 92 chr18 30967365 30967474 -55710074 + MIR SINE MIR 66 144 -64 287 229 33 0 chr18 30967861 30967970 -55709578 - MIR SINE MIR -23 185 71 207 146 21 21 chr18 30968983 30969031 -55708517 + (TTCA)n Simple_repeat Simple_repeat 1 48 0 222 366 67 57 chr18 30969046 30969448 -55708100 - L2 LINE L2 -343 2971 2566 264 304 146 35 chr18 30969494 30969665 -55707883 - L1ME LINE L1 -333 5788 5599 33 25 0 0 chr18 30969802 30969842 -55707706 + AT_rich Low_complexity Low_complexity 1 40 0 316 310 134 6 chr18 30970057 30970228 -55707320 + L2 LINE L2 3117 3309 -4 229 185 54 11 chr18 30972491 30972583 -55704965 + (TA)n Simple_repeat Simple_repeat 2 97 0 292 240 110 29 chr18 30973485 30973678 -55703870 - L1ME3A LINE L1 -15 6155 5950 1807 185 28 11 chr18 30973688 30974045 -55703503 - MLT1A1 LTR MaLR -2 363 1 1952 115 45 3 chr18 30974087 30974373 -55703175 + AluSg SINE Alu 1 298 -12 277 253 69 0 chr18 30974386 30974473 -55703075 - L1ME3A LINE L1 -243 5927 5835 207 0 0 0 chr18 30974476 30974499 -55703049 + (TA)n Simple_repeat Simple_repeat 1 23 0 725 257 62 17 chr18 30974506 30974922 -55702626 - L1M4 LINE L1 -2864 3282 2848 1536 216 8 35 chr18 30975033 30975404 -55702144 - L1MB8 LINE L1 -9 6169 5809 6264 161 2 4 chr18 30975404 30977310 -55700238 - L1PA13 LINE L1 -5 6158 4249 3632 147 33 36 chr18 30977310 30978009 -55699539 + L1PA13 LINE L1 3546 4242 -1904 2053 212 29 9 chr18 30978006 30978450 -55699098 - L1MB8 LINE L1 -358 5820 5368 * 363 279 52 65 chr18 31028641 31028795 -55648753 - MIR SINE MIR -83 179 28 2056 109 0 11 chr18 31029612 31029780 -55647768 - AluSx SINE Alu -11 301 136 2432 53 0 3 chr18 31029780 31030079 -55647469 - AluY SINE Alu -13 298 1 2056 109 0 11 chr18 31030079 31030194 -55647354 - AluSx SINE Alu -176 136 21 405 304 36 14 chr18 31031493 31031631 -55645917 - L2 LINE L2 0 3313 3173 991 169 5 42 chr18 31031710 31031923 -55645625 + L1M4 LINE L1 4787 4991 -1155 2145 191 22 31 chr18 31031925 31032338 -55645210 + MLT2B1 LTR ERVL 6 414 -106 2127 108 24 0 chr18 31032575 31032872 -55644676 - AluSp SINE Alu -9 304 1 243 88 0 0 chr18 31032955 31032989 -55644559 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2673 148 35 10 chr18 31032992 31033477 -55644071 - L1MB1 LINE L1 -12 6156 5660 365 82 0 0 chr18 31033477 31033526 -55644022 + L1P4 LINE L1 5420 5468 -695 371 291 119 62 chr18 31035128 31035640 -55641908 + L1ME LINE L1 352 892 -5178 268 214 43 0 chr18 31035698 31035768 -55641780 + MLT1E2 LTR MaLR 31 103 -523 625 250 22 33 chr18 31035874 31036054 -55641494 - MER45A DNA AcHobo 0 178 1 315 194 22 22 chr18 31037101 31037281 -55640267 + (TA)n Simple_repeat Simple_repeat 1 180 0 26 0 0 0 chr18 31037516 31037542 -55640006 + AT_rich Low_complexity Low_complexity 1 26 0 220 184 0 0 chr18 31038409 31038447 -55639101 - MIR SINE MIR -152 110 73 258 247 0 0 chr18 31038937 31039014 -55638534 + (TA)n Simple_repeat Simple_repeat 1 77 0 235 307 23 0 chr18 31039017 31039105 -55638443 + L1MC4 LINE L1 6614 6703 -1339 229 291 47 0 chr18 31039119 31039205 -55638343 + L1MC4 LINE L1 6614 6703 -1339 244 279 47 0 chr18 31039221 31039307 -55638241 + L1MC4 LINE L1 6614 6703 -1339 230 260 0 62 chr18 31039267 31039363 -55638185 - L1MC4 LINE L1 -1339 6703 6614 * 230 260 0 62 chr18 31039369 31039465 -55638083 - L1MC4 LINE L1 -1339 6703 6614 * 244 326 0 0 chr18 31039425 31039514 -55638034 + L1MC4 LINE L1 6614 6702 -1340 * 258 240 0 73 chr18 31039493 31039589 -55637959 - L1MC4 LINE L1 -1339 6703 6615 488 215 215 0 chr18 31039723 31039844 -55637704 - MLT1A1 LTR MaLR -216 149 3 255 343 40 32 chr18 31039871 31040119 -55637429 + HAL1 LINE L1 1792 2041 -466 532 165 31 0 chr18 31040142 31040239 -55637309 - MLT1C-int LTR MaLR -36 1335 1236 5056 230 26 33 chr18 31040318 31041242 -55636306 - MLT1C-int LTR MaLR -165 1206 290 1990 152 3 0 chr18 31041242 31041551 -55635997 - AluSx SINE Alu -2 310 1 5056 230 26 33 chr18 31041551 31041839 -55635709 - MLT1C-int LTR MaLR -1081 290 2 814 231 42 103 chr18 31041850 31042173 -55635375 - MLT1C LTR MaLR -10 380 101 2185 100 0 0 chr18 31042173 31042462 -55635086 - AluY SINE Alu -22 289 1 814 231 42 103 chr18 31042462 31042527 -55635021 - MLT1C LTR MaLR -289 101 34 387 127 0 0 chr18 31042531 31042594 -55634954 + (TG)n Simple_repeat Simple_repeat 2 64 0 23 54 0 0 chr18 31044287 31044324 -55633224 + AT_rich Low_complexity Low_complexity 1 37 0 879 232 4 84 chr18 31045713 31045950 -55631598 - MER58A DNA MER1_type -6 218 1 257 263 105 70 chr18 31046442 31046556 -55630992 - MLT1H LTR MaLR 0 549 432 312 333 111 0 chr18 31048028 31048172 -55629376 + MIR SINE MIR 103 262 0 185 234 0 21 chr18 31049376 31049423 -55628125 - L2 LINE L2 -1 3312 3267 554 298 40 49 chr18 31049555 31049881 -55627667 - L1ME1 LINE L1 -3 6163 5841 445 255 151 67 chr18 31049898 31050196 -55627352 - L1MEc LINE L1 -4465 2142 1820 301 268 64 64 chr18 31050255 31050412 -55627136 - L1MEc LINE L1 -4834 1592 1436 5152 143 32 11 chr18 31050509 31051482 -55626066 - L1PA16 LINE L1 0 6166 5175 1489 298 62 30 chr18 31052221 31053064 -55624484 - L1ME1 LINE L1 -4 6162 5293 718 274 134 25 chr18 31053182 31053631 -55623917 - L1ME1 LINE L1 -921 5225 4728 318 331 24 8 chr18 31054794 31054921 -55622627 + L2 LINE L2 3177 3305 -8 307 236 34 22 chr18 31054929 31055018 -55622530 + MIR SINE MIR 68 157 -105 254 182 146 0 chr18 31055922 31055977 -55621571 - Tigger4(Zombi) DNA MER2_type 0 2731 2669 451 266 100 30 chr18 31055977 31056278 -55621270 + HAL1b LINE L1 1017 1338 -10 560 291 21 8 chr18 31056411 31056645 -55620903 + L1MC3 LINE L1 5613 5849 -1959 328 321 25 25 chr18 31056688 31056850 -55620698 - MIR SINE MIR -13 249 88 270 0 0 0 chr18 31057271 31057301 -55620247 + (TG)n Simple_repeat Simple_repeat 2 31 0 3019 186 89 82 chr18 31057781 31058044 -55619504 + L1MC3 LINE L1 6831 7091 -694 254 167 37 19 chr18 31058044 31058098 -55619450 + MLT1F1 LTR MaLR 35 89 -478 3019 186 89 82 chr18 31058098 31058721 -55618827 + L1MC3 LINE L1 7091 7777 -8 287 229 49 0 chr18 31058734 31058856 -55618692 + (TA)n Simple_repeat Simple_repeat 2 129 0 644 254 46 20 chr18 31059462 31059659 -55617889 + MIR SINE MIR 2 203 -59 1213 133 5 5 chr18 31060280 31060468 -55617080 + AluSx SINE Alu 28 215 -97 4965 127 78 147 chr18 31060470 31061811 -55615737 - pTR5 LTR ERV1 0 2438 31 7339 45 0 1 chr18 31062733 31064097 -55613451 + L1PA5 LINE L1 4786 6149 -5 1531 252 49 47 chr18 31065788 31066807 -55610741 - L1ME1 LINE L1 -239 5910 4884 359 288 66 66 chr18 31067023 31067266 -55610282 - L1ME1 LINE L1 -5042 1077 835 411 302 176 6 chr18 31067418 31067577 -55609971 + MER5A DNA MER1_type 4 189 0 43 20 0 0 chr18 31068111 31068161 -55609387 + AT_rich Low_complexity Low_complexity 1 50 0 237 333 0 0 chr18 31068378 31068456 -55609092 + T-rich Low_complexity Low_complexity 1 78 0 2395 89 0 6 chr18 31069125 31069438 -55608110 - AluY SINE Alu 0 311 1 1083 209 5 5 chr18 31069726 31069936 -55607612 + MER2 DNA MER2_type 1 210 -135 24 53 0 0 chr18 31069946 31069984 -55607564 + AT_rich Low_complexity Low_complexity 1 38 0 430 337 34 10 chr18 31070248 31070542 -55607006 + L1ME LINE L1 5515 5815 -306 22 56 0 0 chr18 31070612 31070648 -55606900 + AT_rich Low_complexity Low_complexity 1 36 0 243 286 95 24 chr18 31071075 31071243 -55606305 + MLT1J LTR MaLR 301 480 -31 2332 188 45 39 chr18 31071495 31072079 -55605469 - L1MD3 LINE L1 -14 7981 7395 304 263 11 11 chr18 31072094 31072189 -55605359 - MLT1F1 LTR MaLR -472 95 1 414 228 203 35 chr18 31072206 31072533 -55605015 - L1MD3 LINE L1 -730 7078 6743 336 309 24 24 chr18 31072561 31072687 -55604861 - L1MCb LINE L1 -1085 5856 5731 609 258 21 57 chr18 31072695 31072978 -55604570 - L1MCb LINE L1 -2131 4810 4538 57 66 0 0 chr18 31072980 31073086 -55604462 + AT_rich Low_complexity Low_complexity 1 106 0 2125 293 49 33 chr18 31073123 31074478 -55603070 - L1MCb LINE L1 -2660 4281 2937 803 215 21 11 chr18 31074479 31074670 -55602878 + LTR1 LTR ERV1 1 193 -592 15789 183 34 26 chr18 31074720 31077708 -55599840 + HUERS-P2 LTR ERV1 78 3088 0 1827 210 180 48 chr18 31077715 31078438 -55599110 + LTR1B LTR ERV1 9 826 0 355 235 181 7 chr18 31078454 31078731 -55598817 - L1MCb LINE L1 -4048 2893 2569 1752 140 9 36 chr18 31078778 31079314 -55598234 + MER4A LTR ERV1 5 664 0 318 226 94 94 chr18 31079375 31079609 -55597939 - L1M1 LINE L1 -4551 3014 2781 1498 201 11 3 chr18 31079620 31079903 -55597645 + MER49 LTR ERV1 1 285 -638 2785 166 39 80 chr18 31079989 31080351 -55597197 + MER4D LTR ERV1 238 560 -343 2305 80 17 0 chr18 31080351 31080650 -55596898 - AluY SINE Alu -7 304 1 2785 166 39 80 chr18 31080650 31080972 -55596576 + MER4D LTR ERV1 560 894 -9 909 269 71 39 chr18 31080977 31081789 -55595759 - L1MCb LINE L1 -4887 1536 1212 1855 215 35 52 chr18 31081873 31082393 -55595155 + MER67D LTR ERV1 1 511 -3 247 326 25 54 chr18 31082502 31082872 -55594676 - L1MCb LINE L1 -5741 681 246 677 291 110 12 chr18 31082925 31083262 -55594286 - LTR50 LTR ERVL -125 670 301 35 41 0 0 chr18 31083501 31083550 -55593998 + AT_rich Low_complexity Low_complexity 1 49 0 24 32 0 0 chr18 31085160 31085191 -55592357 + AT_rich Low_complexity Low_complexity 1 31 0 1503 183 49 7 chr18 31085398 31085683 -55591865 + AluJb SINE Alu 1 297 -15 2829 49 0 3 chr18 31087193 31087540 -55590008 - L1PA7 LINE L1 -12 6142 5797 632 189 8 0 chr18 31087543 31087675 -55589873 - L1 LINE L1 -2097 4049 3917 929 282 62 7 chr18 31087726 31088017 -55589531 + MLT1D LTR MaLR 5 311 -194 766 188 127 46 chr18 31088356 31088553 -55588995 + MLT1D LTR MaLR 293 505 0 744 307 168 6 chr18 31088554 31088893 -55588655 - L2 LINE L2 -2855 459 66 2261 96 3 0 chr18 31089551 31089853 -55587695 + AluSp SINE Alu 1 303 -10 36 0 0 0 chr18 31091272 31091308 -55586240 + AT_rich Low_complexity Low_complexity 1 36 0 805 147 49 14 chr18 31091701 31091844 -55585704 + THE1C LTR MaLR 1 148 -227 225 108 0 0 chr18 31092044 31092086 -55585462 + (CAGAGA)n Simple_repeat Simple_repeat 1 79 0 225 108 0 0 chr18 31092086 31092123 -55585425 + (CAGAGA)n Simple_repeat Simple_repeat 2 38 0 602 308 11 34 chr18 31092248 31092511 -55585037 + L1MC4 LINE L1 6652 6908 -1134 2584 246 85 14 chr18 31092517 31093321 -55584227 + L1MDb LINE L1 562 1422 -4987 210 373 93 0 chr18 31094340 31094458 -55583090 + MIR SINE MIR 48 176 -86 1536 156 59 47 chr18 31094561 31094900 -55582648 + MER61A LTR ERV1 1 343 0 2164 182 54 52 chr18 31094902 31095518 -55582030 + MER61A-int LTR ERV1 3 700 -4517 24663 98 42 19 chr18 31095544 31099321 -55578227 + MER61A-int LTR ERV1 1306 5217 0 1652 139 62 45 chr18 31099321 31099658 -55577890 + MER61A LTR ERV1 1 343 0 363 333 54 29 chr18 31100235 31100439 -55577109 + LTR33 LTR ERVL 304 512 -9 338 191 0 16 chr18 31100454 31100517 -55577031 - MLT1I LTR MaLR -2 407 346 196 354 50 20 chr18 31101125 31101224 -55576324 + MIR SINE MIR 20 121 -87 1919 181 118 41 chr18 31101432 31101940 -55575608 - LTR10B LTR ERV1 0 547 1 984 224 31 7 chr18 31101940 31102224 -55575324 - LTR10B-int LTR ERV1 0 6649 6254 * 1533 191 0 17 chr18 31102216 31102509 -55575039 - LTR10B-int LTR ERV1 -886 6899 6612 3671 237 29 0 chr18 31102547 31103307 -55574241 - LTR10B-int LTR ERV1 -1950 5835 5054 * 4135 205 5 32 chr18 31103304 31104427 -55573121 - LTR10B-int LTR ERV1 -3175 4112 2692 4711 242 17 6 chr18 31104482 31105495 -55572053 - LTR10B-int LTR ERV1 -5682 2103 1080 358 219 39 86 chr18 31105525 31105653 -55571895 - LTR10B-int LTR ERV1 -5928 721 510 * 1282 183 103 8 chr18 31105641 31105904 -55571644 - LTR10B-int LTR ERV1 -6357 292 5 1605 173 103 13 chr18 31105904 31106291 -55571257 - LTR10B LTR ERV1 0 547 126 564 149 65 52 chr18 31106452 31106606 -55570942 - LTR10B LTR ERV1 -391 156 1 257 361 50 0 chr18 31108023 31108142 -55569406 + L2 LINE L2 2225 2349 -965 391 313 50 62 chr18 31108166 31108406 -55569142 - L1ME3A LINE L1 -9 6161 5925 290 291 0 12 chr18 31108457 31108543 -55569005 + MLT2F LTR ERVL 53 137 -526 1335 268 41 9 chr18 31109160 31109719 -55567829 - L1M4 LINE L1 -1342 5302 4726 821 265 35 52 chr18 31109825 31110172 -55567376 - L1M4 LINE L1 -6186 356 16 345 359 93 24 chr18 31110369 31110779 -55566769 - L2 LINE L2 -1197 2117 1680 345 332 43 47 chr18 31111685 31111896 -55565652 + MIR SINE MIR 9 218 -44 999 198 9 26 chr18 31112302 31112534 -55565014 - L1MB8 LINE L1 -2 6176 5949 2493 65 0 0 chr18 31113467 31113775 -55563773 - AluY SINE Alu -3 308 1 192 275 50 50 chr18 31114267 31114347 -55563201 - MIR SINE MIR -71 191 112 263 299 28 28 chr18 31114638 31114745 -55562803 + MIR3 SINE MIR 92 198 -10 37 0 0 0 chr18 31114900 31114937 -55562611 + AT_rich Low_complexity Low_complexity 1 37 0 2177 112 0 7 chr18 31115225 31115529 -55562019 - AluSc SINE Alu -7 302 1 28 0 0 0 chr18 31115661 31115689 -55561859 + AT_rich Low_complexity Low_complexity 1 28 0 429 332 73 18 chr18 31116260 31116480 -55561068 + MIR SINE MIR 13 244 -18 264 336 52 9 chr18 31116712 31116828 -55560720 - L3 LINE CR1 -88 1489 1369 208 300 55 45 chr18 31117221 31117331 -55560217 - L3 LINE CR1 -588 989 879 23 68 0 0 chr18 31118911 31118955 -55558593 + AT_rich Low_complexity Low_complexity 1 44 0 1530 202 0 16 chr18 31119003 31119320 -55558228 - AluJb SINE Alu 0 312 1 371 299 26 62 chr18 31120099 31120293 -55557255 - MLT1J2 LTR MaLR -191 259 73 230 368 26 8 chr18 31124483 31124600 -55552948 - L2 LINE L2 -219 3053 2935 458 384 47 42 chr18 31124658 31125273 -55552275 - L2 LINE L2 -459 2855 2238 313 294 16 48 chr18 31125892 31126018 -55551530 + MIR SINE MIR 14 135 -127 184 243 43 57 chr18 31126454 31126524 -55551024 - MIR SINE MIR -124 138 70 3175 159 36 37 chr18 31126529 31127147 -55550401 - LTR29 LTR ERV1 -5 617 1 442 197 50 69 chr18 31127205 31127377 -55550171 - LTR26 LTR ERV1 -4 723 430 * 508 146 62 21 chr18 31127374 31127470 -55550078 - LTR8 LTR ERV1 -591 100 1 3245 164 22 9 chr18 31127501 31128082 -55549466 - LTR49 LTR ERV1 -6 589 1 9672 209 36 7 chr18 31128614 31130547 -55547001 + L1M1 LINE L1 17 2005 -5560 1016 89 83 0 chr18 31130547 31130704 -55546844 + MSTA LTR MaLR 2 171 -257 7311 184 32 23 chr18 31130724 31132956 -55544592 + L1M1 LINE L1 2647 4923 -2642 2420 56 7 3 chr18 31132956 31133260 -55544288 + AluY SINE Alu 4 308 -3 7311 184 32 23 chr18 31133260 31133837 -55543711 + L1M1 LINE L1 4923 5493 -2072 1056 299 77 63 chr18 31133935 31134752 -55542796 - L1MDb LINE L1 -5479 930 9 2287 259 28 11 chr18 31136148 31136856 -55540692 + L1M1 LINE L1 5861 6580 -985 3923 161 13 26 chr18 31136957 31137738 -55539810 + L1MC1 LINE L1 5561 6331 -2 2465 202 33 31 chr18 31138295 31138835 -55538713 - MER44D DNA MER2_type 0 605 10 494 319 46 14 chr18 31139151 31139367 -55538181 - MIR SINE MIR -14 248 26 2115 84 3 18 chr18 31139693 31139979 -55537569 - AluY SINE Alu -29 282 1 3320 224 177 11 chr18 31140868 31141767 -55535781 - THE1B-int LTR MaLR -601 1050 3 1856 152 93 3 chr18 31141781 31142104 -55535444 - THE1B LTR MaLR -12 352 1 714 296 120 3 chr18 31143408 31143692 -55533856 + L1MEc LINE L1 592 908 -5813 695 314 63 16 chr18 31143702 31144188 -55533360 + L1MEc LINE L1 1648 2205 -4441 1191 175 30 22 chr18 31144239 31144507 -55533041 - L1M2 LINE L1 -736 5576 5307 511 222 0 0 chr18 31144510 31144618 -55532930 - MLT1C LTR MaLR -209 258 151 942 234 67 39 chr18 31144618 31144977 -55532571 + L1ME1 LINE L1 5635 6003 -163 240 250 12 12 chr18 31144975 31145059 -55532489 + L1MA10 LINE L1 6232 6315 -19 * 22 0 0 0 chr18 31145148 31145170 -55532378 + AT_rich Low_complexity Low_complexity 1 22 0 223 233 12 23 chr18 31145230 31145316 -55532232 + T-rich Low_complexity Low_complexity 2 86 0 22 35 0 0 chr18 31145401 31145430 -55532118 + AT_rich Low_complexity Low_complexity 1 29 0 2481 167 41 10 chr18 31145456 31145946 -55531602 - L1MA8 LINE L1 -3 6288 5784 180 0 0 0 chr18 31145946 31145966 -55531582 + (TA)n Simple_repeat Simple_repeat 1 20 0 245 157 0 20 chr18 31145971 31146022 -55531526 + L1M1 LINE L1 5744 5793 -512 792 222 92 21 chr18 31146110 31146422 -55531126 - L1ME2 LINE L1 -163 6001 5665 195 167 0 0 chr18 31146456 31146498 -55531050 + (TA)n Simple_repeat Simple_repeat 2 43 0 1013 237 23 8 chr18 31146498 31146760 -55530788 - L1M2 LINE L1 -1111 5035 4770 2152 109 7 0 chr18 31146801 31147104 -55530444 - AluSp SINE Alu -8 305 1 23 54 0 0 chr18 31147301 31147338 -55530210 + AT_rich Low_complexity Low_complexity 1 37 0 21 71 0 0 chr18 31147788 31147830 -55529718 + AT_rich Low_complexity Low_complexity 1 42 0 243 225 169 34 chr18 31148073 31148162 -55529386 - L1MC4 LINE L1 -1191 6851 6751 228 135 0 0 chr18 31148255 31148292 -55529256 + (CATATA)n Simple_repeat Simple_repeat 6 42 0 200 243 0 27 chr18 31148300 31148374 -55529174 + (TA)n Simple_repeat Simple_repeat 2 73 0 1568 188 7 3 chr18 31148505 31148798 -55528750 - AluJb SINE Alu -15 297 4 482 328 38 0 chr18 31148798 31149036 -55528512 - L1MC4 LINE L1 -1913 5895 5649 560 97 68 0 chr18 31149043 31149313 -55528235 + (TA)n Simple_repeat Simple_repeat 1 288 0 495 310 53 9 chr18 31149360 31149586 -55527962 - L1MC4 LINE L1 -2210 5598 5363 368 235 20 3 chr18 31150005 31150139 -55527409 - L1MEc LINE L1 -3831 3137 3012 492 302 97 25 chr18 31150267 31150940 -55526608 - L1MEc LINE L1 -4305 2817 2097 377 277 40 0 chr18 31151208 31151356 -55526192 - L1MEc LINE L1 -4905 1518 1365 361 252 17 122 chr18 31151957 31152187 -55525361 - L1MEc LINE L1 -5855 1076 871 1994 132 14 0 chr18 31152302 31152583 -55524965 + AluSx SINE Alu 1 285 -27 23 54 0 0 chr18 31153487 31153524 -55524024 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr18 31154122 31154153 -55523395 + AT_rich Low_complexity Low_complexity 1 31 0 220 363 25 0 chr18 31156170 31156250 -55521298 - MIR SINE MIR -140 122 41 24 32 0 0 chr18 31156962 31156993 -55520555 + AT_rich Low_complexity Low_complexity 1 31 0 185 0 0 39 chr18 31157100 31157126 -55520422 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2046 144 33 28 chr18 31157652 31158014 -55519534 + THE1B LTR MaLR 1 364 0 659 324 74 18 chr18 31159219 31159398 -55518150 + L1MDa LINE L1 18 185 -6355 189 74 0 0 chr18 31159398 31159425 -55518123 + (TTAA)n Simple_repeat Simple_repeat 4 30 0 659 324 74 18 chr18 31159425 31159581 -55517967 + L1MDa LINE L1 185 372 -6168 243 289 39 67 chr18 31160280 31160460 -55517088 + L1MDa LINE L1 1031 1205 -5338 * 1214 258 36 89 chr18 31160454 31161113 -55516435 + L1MDa LINE L1 1462 2082 -4458 2007 97 61 0 chr18 31161113 31161391 -55516157 + AluSq SINE Alu 3 297 -16 1214 258 36 89 chr18 31161391 31161448 -55516100 + L1MDa LINE L1 2082 2140 -4400 14280 240 25 11 chr18 31161474 31166246 -55511302 - L1PA15 LINE L1 -1 6815 1531 2183 105 0 29 chr18 31166246 31166559 -55510989 - AluSg SINE Alu -4 306 3 14280 240 25 11 chr18 31166559 31168112 -55509436 - L1PA15 LINE L1 -5285 1531 1 715 202 27 33 chr18 31168135 31168318 -55509230 - L1MB3 LINE L1 0 6183 6002 684 251 54 32 chr18 31168329 31168550 -55508998 - L1MEc LINE L1 -3361 2854 2624 1326 210 63 14 chr18 31168550 31168898 -55508650 - MLT1A1 LTR MaLR 0 365 1 684 251 54 32 chr18 31168898 31168955 -55508593 - L1MEc LINE L1 -3591 2624 2570 1085 144 74 82 chr18 31168958 31169201 -55508347 - MER67D LTR ERV1 -271 243 3 969 284 86 10 chr18 31169204 31169588 -55507960 - L1MEc LINE L1 -4300 2096 1684 1859 285 71 50 chr18 31169598 31170655 -55506893 - L1MEc LINE L1 -5245 1151 73 21 57 0 0 chr18 31170784 31170819 -55506729 + AT_rich Low_complexity Low_complexity 1 35 0 180 417 17 25 chr18 31173007 31173127 -55504421 + MIR SINE MIR 18 136 -126 458 279 28 60 chr18 31173834 31174049 -55503499 + L1ME LINE L1 477 684 -5846 313 276 33 99 chr18 31174073 31174345 -55503203 + L1ME LINE L1 822 1075 -5455 908 280 78 43 chr18 31174432 31175332 -55502216 + L1ME LINE L1 1304 2171 -4369 2541 40 0 3 chr18 31175332 31175631 -55501917 + AluY SINE Alu 1 298 -13 908 280 78 43 chr18 31175631 31175697 -55501851 + L1ME LINE L1 2171 3274 -3266 * 1180 241 62 28 chr18 31175693 31176125 -55501423 - L1M4 LINE L1 -3423 2723 2277 1699 245 73 50 chr18 31176155 31176800 -55500748 - L1ME1 LINE L1 -16 6219 5560 619 236 82 52 chr18 31176936 31177266 -55500282 - L1ME1 LINE L1 -849 5366 5027 449 246 36 42 chr18 31177262 31177429 -55500119 - L1ME1 LINE L1 -2297 3918 3753 * 246 261 0 0 chr18 31177430 31177541 -55500007 + CT-rich Low_complexity Low_complexity 2 112 0 524 291 120 17 chr18 31178361 31178653 -55498895 - L1ME1 LINE L1 -4667 1729 1408 34 65 0 0 chr18 31179086 31179148 -55498400 + AT_rich Low_complexity Low_complexity 1 62 0 1086 201 16 5 chr18 31180254 31180448 -55497100 - AluJo SINE Alu -115 197 2 712 192 8 0 chr18 31180463 31180593 -55496955 - FLAM_C SINE Alu -2 131 1 273 228 13 128 chr18 31181113 31181262 -55496286 + MIR SINE MIR 101 232 -30 278 222 32 0 chr18 31181287 31181413 -55496135 + (TA)n Simple_repeat Simple_repeat 2 131 0 328 309 123 6 chr18 31181563 31181725 -55495823 - MIR SINE MIR -19 243 63 22 88 0 0 chr18 31182432 31182489 -55495059 + AT_rich Low_complexity Low_complexity 1 57 0 1448 223 121 20 chr18 31183045 31183485 -55494063 + MLT1D LTR MaLR 22 505 0 327 164 0 0 chr18 31183620 31183681 -55493867 + (CTA)n Simple_repeat Simple_repeat 3 63 0 624 261 88 31 chr18 31183693 31183919 -55493629 - MIR SINE MIR -1 261 23 752 225 116 74 chr18 31184049 31184334 -55493214 - AluJo SINE Alu -5 297 1 3493 177 12 55 chr18 31184403 31185223 -55492325 + LTR1 LTR ERV1 1 785 0 8597 106 35 2 chr18 31185313 31186559 -55490989 + HSMAR1 DNA Mariner 1 1287 0 635 346 204 8 chr18 31187131 31187651 -55489897 - L2 LINE L2 -337 2977 2356 1006 172 62 101 chr18 31187668 31187772 -55489776 + AluJo SINE Alu 13 120 -192 1818 107 19 0 chr18 31187772 31188042 -55489506 + L1PA14 LINE L1 5878 6152 -9 1006 172 62 101 chr18 31188042 31188245 -55489303 + AluJo SINE Alu 120 308 -4 2199 75 0 3 chr18 31188248 31188585 -55488963 + AluY SINE Alu 1 336 0 22 0 0 0 chr18 31188639 31188661 -55488887 + AT_rich Low_complexity Low_complexity 1 22 0 280 365 28 0 chr18 31190325 31190432 -55487116 + MIR3 SINE MIR 99 208 0 21 57 0 0 chr18 31190747 31190782 -55486766 + AT_rich Low_complexity Low_complexity 1 35 0 435 68 0 0 chr18 31191271 31191330 -55486218 + (CA)n Simple_repeat Simple_repeat 2 60 0 475 241 24 52 chr18 31193788 31194000 -55483548 - L1MCc LINE L1 -5086 1337 1132 558 254 23 12 chr18 31194521 31194694 -55482854 - L1MCc LINE L1 -6179 244 70 391 342 107 39 chr18 31195319 31195881 -55481667 + L2 LINE L2 480 1079 -2235 250 279 54 47 chr18 31196085 31196214 -55481334 - MIR SINE MIR 0 262 133 396 325 63 21 chr18 31196293 31196484 -55481064 + L2 LINE L2 1508 1706 -1608 2478 270 66 5 chr18 31196634 31196983 -55480565 + L1MEc LINE L1 147 473 -5923 2051 93 3 48 chr18 31196983 31197295 -55480253 - AluSq SINE Alu -15 298 1 2478 270 66 5 chr18 31197295 31197722 -55479826 + L1MEc LINE L1 473 970 -5426 231 261 251 24 chr18 31197732 31197939 -55479609 + L1MEc LINE L1 1001 1254 -5142 726 143 130 17 chr18 31197999 31198381 -55479167 + L1P4 LINE L1 5128 5528 -637 183 215 28 140 chr18 31249039 31249146 -55428402 - MER5C DNA MER1_type -187 137 43 1995 104 35 0 chr18 31249341 31249628 -55427920 + AluSx SINE Alu 1 297 -15 245 29 0 29 chr18 31249658 31249693 -55427855 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 183 100 0 0 chr18 31250181 31250211 -55427337 + (TC)n Simple_repeat Simple_repeat 2 31 0 219 238 6 58 chr18 31250640 31250812 -55426736 + T-rich Low_complexity Low_complexity 5 167 0 391 209 19 0 chr18 31252931 31253036 -55424512 + CT-rich Low_complexity Low_complexity 3 109 0 2139 170 73 12 chr18 31253152 31253564 -55423984 + LTR1B LTR ERV1 390 826 0 3369 87 247 96 chr18 31255378 31256224 -55421324 + pTR5 LTR ERV1 1320 2438 0 225 254 30 15 chr18 31256226 31256293 -55421255 - MIR SINE MIR -109 153 86 2134 99 3 3 chr18 31256454 31256767 -55420781 + AluSq SINE Alu 1 313 0 1362 186 31 62 chr18 31257291 31257511 -55420037 + MLT1A2 LTR MaLR 1 205 -169 2250 103 3 6 chr18 31257511 31257822 -55419726 + AluSp SINE Alu 1 310 -3 1362 186 31 62 chr18 31257822 31257987 -55419561 + MLT1A2 LTR MaLR 205 374 0 334 317 122 0 chr18 31258173 31258337 -55419211 - MIR SINE MIR -4 258 75 1518 261 27 7 chr18 31258892 31259443 -55418105 + L1MC/D LINE L1 912 1473 -4953 3993 271 105 16 chr18 31259457 31261276 -55416272 + L1MC/D LINE L1 3605 5584 -842 737 194 17 8 chr18 31261899 31262137 -55415411 + CT-rich Low_complexity Low_complexity 1 240 0 1449 158 81 40 chr18 31262165 31262462 -55415086 - AluSx SINE Alu -3 309 1 201 237 32 108 chr18 31262598 31262691 -55414857 - MER5C DNA MER1_type -237 87 2 288 0 0 0 chr18 31263230 31263262 -55414286 + (CA)n Simple_repeat Simple_repeat 1 32 0 764 248 84 4 chr18 31263308 31263550 -55413998 + L1MCc LINE L1 -358 240 -5781 591 192 80 40 chr18 31263588 31263739 -55413809 + MER50 LTR ERV1 10 166 -568 387 246 130 53 chr18 31263801 31264008 -55413540 + MER50 LTR ERV1 331 553 -181 994 296 46 28 chr18 31264019 31264154 -55413394 + L1MCc LINE L1 282 413 -5608 1872 151 17 23 chr18 31264154 31264499 -55413049 - MER61A LTR ERV1 0 343 1 994 296 46 28 chr18 31264499 31264822 -55412726 + L1MCc LINE L1 413 748 -5273 1584 160 81 7 chr18 31264880 31265418 -55412130 - MER51A LTR ERV1 0 640 1 677 228 14 0 chr18 31265418 31265563 -55411985 + L1MCc LINE L1 806 952 -5069 910 227 6 16 chr18 31265676 31265898 -55411650 + L1MC/D LINE L1 5634 5861 -710 1322 243 68 6 chr18 31265899 31266220 -55411328 - MLT1A1 LTR MaLR -13 352 12 2529 254 36 20 chr18 31266231 31266866 -55410682 - MLT1A1-int LTR MaLR 0 1735 1091 1891 108 8 4 chr18 31266935 31267203 -55410345 - THE1B LTR MaLR 0 364 96 700 239 122 40 chr18 31267350 31267597 -55409951 - MER92A LTR ERV1 -145 267 1 955 127 3 6 chr18 31267659 31267680 -55409868 + L1P4 LINE L1 5314 5334 -827 3866 129 5 26 chr18 31267680 31268332 -55409216 - L1PA13 LINE L1 -17 6146 5509 955 127 3 6 chr18 31268332 31268485 -55409063 + L1PA13 LINE L1 5334 5491 -670 21 0 0 0 chr18 31268536 31268557 -55408991 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 31268952 31268980 -55408568 + AT_rich Low_complexity Low_complexity 1 28 0 27 81 0 0 chr18 31269013 31269075 -55408473 + AT_rich Low_complexity Low_complexity 1 62 0 188 312 143 0 chr18 31269674 31269751 -55407797 - MIR SINE MIR -122 140 53 232 59 29 0 chr18 31270481 31270515 -55407033 + Alu SINE Alu 3 37 -265 316 89 13 51 chr18 31270561 31270640 -55406908 + (TA)n Simple_repeat Simple_repeat 2 77 0 309 233 70 12 chr18 31270669 31270841 -55406707 + MER20B DNA MER1_type 568 749 -34 1380 131 0 27 chr18 31270970 31271192 -55406356 + AluSp SINE Alu 87 302 -11 287 329 2 0 chr18 31271196 31271323 -55406225 + L1MCc LINE L1 1852 1952 -4588 1464 172 63 60 chr18 31271607 31271938 -55405610 - MER7A DNA MER2_type -15 331 2 1872 159 3 7 chr18 31275455 31275763 -55401785 - AluSq SINE Alu -6 307 1 194 114 0 45 chr18 31275777 31275821 -55401727 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 943 223 32 113 chr18 31276980 31277352 -55400196 - MLT1A1 LTR MaLR -21 344 3 738 213 69 6 chr18 31277355 31277529 -55400019 + MLT1A1 LTR MaLR 181 365 0 333 281 26 26 chr18 31277830 31277944 -55399604 - MLT1J LTR MaLR -396 115 2 261 0 0 0 chr18 31278394 31278423 -55399125 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 2879 80 53 0 chr18 31278757 31279168 -55398380 - L1PA10 LINE L1 0 6168 5736 345 292 45 58 chr18 31279177 31279468 -55398080 - L1ME LINE L1 -514 5607 5319 1478 213 82 0 chr18 31280124 31280443 -55397105 + MER2 DNA MER2_type 1 345 0 1918 124 78 0 chr18 31282527 31282810 -55394738 + AluSx SINE Alu 1 305 -7 516 275 28 24 chr18 31282837 31283048 -55394500 + L1MCc LINE L1 2939 3150 -3390 519 202 40 0 chr18 31283048 31283147 -55394401 - FRAM SINE Alu -16 160 58 401 36 36 0 chr18 31283296 31283351 -55394197 - THE1B LTR MaLR -307 57 1 4040 227 60 12 chr18 31283351 31284293 -55393255 - MLT1A1-int LTR MaLR -744 991 4 1640 222 28 14 chr18 31284294 31284654 -55392894 - MLT1A1 LTR MaLR 0 365 1 4727 224 42 55 chr18 31284654 31286234 -55391314 + L1MC3 LINE L1 5582 7056 -729 670 159 69 7 chr18 31286331 31286476 -55391072 + L1MB2 LINE L1 6015 6168 -3 1996 146 0 0 chr18 31286544 31286832 -55390716 - AluSx SINE Alu -24 288 1 185 94 31 0 chr18 31287217 31287249 -55390299 + CT-rich Low_complexity Low_complexity 2 34 0 1829 166 0 3 chr18 31288319 31288608 -55388940 + AluSx SINE Alu 1 288 -24 180 0 0 0 chr18 31288609 31288629 -55388919 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 34 24 0 0 chr18 31288820 31288861 -55388687 + AT_rich Low_complexity Low_complexity 1 41 0 447 68 0 0 chr18 31289287 31289346 -55388202 + (GA)n Simple_repeat Simple_repeat 2 60 0 1394 211 73 29 chr18 31289350 31289691 -55387857 - MLT1A1 LTR MaLR -7 358 3 303 28 0 0 chr18 31289735 31289771 -55387777 + (TA)n Simple_repeat Simple_repeat 1 36 0 1173 191 17 0 chr18 31290204 31290434 -55387114 + MLT2C2 LTR ERVL 2 235 -229 1921 163 113 0 chr18 31290450 31290830 -55386718 + MSTA LTR MaLR 4 426 -2 2742 177 12 4 chr18 31290832 31291329 -55386219 + MSTA-int LTR MaLR 1 501 -1150 1616 149 8 8 chr18 31291335 31291603 -55385945 + AluSx SINE Alu 6 273 -39 1995 83 28 177 chr18 31291751 31292219 -55385329 + MER48 LTR ERV1 1 398 0 333 309 53 27 chr18 31292219 31292396 -55385152 + HAL1 LINE L1 1752 1936 -571 279 236 34 11 chr18 31292601 31292690 -55384858 - MLT1E LTR MaLR -7 586 496 * 846 232 55 126 chr18 31292675 31293072 -55384476 - MLT1E LTR MaLR -223 370 2 22 0 0 0 chr18 31295086 31295108 -55382440 + AT_rich Low_complexity Low_complexity 1 22 0 938 246 80 16 chr18 31297827 31298297 -55379251 + MLT1F1 LTR MaLR 1 547 -20 1690 191 7 0 chr18 31298313 31298616 -55378932 + MER7A DNA MER2_type 1 303 -43 359 314 14 0 chr18 31298881 31299021 -55378527 - L1MEc LINE L1 -4576 1982 1818 3722 167 27 24 chr18 31299460 31300165 -55377383 + MSTA-int LTR MaLR 874 1580 0 1085 212 107 14 chr18 31300165 31300517 -55377031 + MSTA LTR MaLR 1 375 0 2417 258 41 39 chr18 31301147 31302018 -55375530 - L1MC3 LINE L1 -723 7062 6190 24 0 0 0 chr18 31302240 31302264 -55375284 + AT_rich Low_complexity Low_complexity 1 24 0 44 80 0 0 chr18 31302276 31302376 -55375172 + AT_rich Low_complexity Low_complexity 1 100 0 25 83 0 0 chr18 31302672 31302732 -55374816 + AT_rich Low_complexity Low_complexity 1 60 0 324 111 0 0 chr18 31302736 31302790 -55374758 - L1MB4 LINE L1 -1 6179 6126 5886 181 23 30 chr18 31302802 31305176 -55372372 - L1MA4A LINE L1 -5 7000 4638 3120 172 8 74 chr18 31305175 31306148 -55371400 - L1MA4A LINE L1 -3598 3250 2355 * 9222 230 43 5 chr18 31306141 31308106 -55369442 - L1MA4A LINE L1 -4809 2040 2 350 59 98 0 chr18 31308105 31308156 -55369392 - L1MB3 LINE L1 -40 6143 6088 * 216 0 0 0 chr18 31308338 31308362 -55369186 + (TA)n Simple_repeat Simple_repeat 1 24 0 333 196 39 45 chr18 31308464 31308643 -55368905 + (GGGTG)n Simple_repeat Simple_repeat 3 180 0 2013 81 0 12 chr18 31308768 31309027 -55368521 - AluY SINE Alu -12 299 44 28 0 0 0 chr18 31309030 31309058 -55368490 + AT_rich Low_complexity Low_complexity 1 28 0 252 200 0 0 chr18 31310236 31310291 -55367257 + (TA)n Simple_repeat Simple_repeat 1 55 0 321 228 0 13 chr18 31310447 31310526 -55367022 + AluJ/FRAM SINE Alu 217 294 -8 542 283 110 0 chr18 31310829 31311020 -55366528 - MIR SINE MIR -4 258 47 28 0 0 0 chr18 31311200 31311228 -55366320 + AT_rich Low_complexity Low_complexity 1 28 0 257 307 15 0 chr18 31311254 31311391 -55366157 + (TA)n Simple_repeat Simple_repeat 1 139 0 23 33 0 0 chr18 31312345 31312375 -55365173 + AT_rich Low_complexity Low_complexity 1 30 0 2096 105 23 10 chr18 31313462 31313768 -55363780 - AluSg SINE Alu 0 310 1 210 37 0 0 chr18 31313857 31313884 -55363664 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 523 261 80 17 chr18 31314069 31314245 -55363303 - MIR SINE MIR 0 262 76 2781 10 0 0 chr18 31314425 31314736 -55362812 + AluYa5 SINE Alu 1 311 0 270 0 0 0 chr18 31315552 31315582 -55361966 + (CA)n Simple_repeat Simple_repeat 2 31 0 1731 218 8 3 chr18 31315586 31315967 -55361581 + L1MB3 LINE L1 5799 6181 -2 29 28 0 0 chr18 31316318 31316354 -55361194 + AT_rich Low_complexity Low_complexity 1 36 0 424 339 64 17 chr18 31316546 31316779 -55360769 + MIR SINE MIR 18 261 -1 1483 183 55 14 chr18 31318941 31319230 -55358318 + AluJb SINE Alu 1 301 -11 2288 114 0 0 chr18 31319645 31319953 -55357595 - AluSc SINE Alu -1 308 1 56 0 0 0 chr18 31320305 31320361 -55357187 + AT_rich Low_complexity Low_complexity 1 56 0 265 281 37 0 chr18 31321511 31321593 -55355955 - MIR SINE MIR -73 189 105 312 70 0 0 chr18 31321779 31321822 -55355726 + (CA)n Simple_repeat Simple_repeat 2 44 0 3304 177 70 25 chr18 31322031 31322507 -55355041 - L1MA7 LINE L1 0 6291 5771 285 75 0 0 chr18 31322507 31322547 -55355001 + (TA)n Simple_repeat Simple_repeat 1 40 0 3304 177 70 25 chr18 31322547 31322786 -55354762 - L1MA7 LINE L1 -520 5771 5544 2180 208 8 28 chr18 31322785 31323286 -55354262 + L1 LINE L1 4662 5152 -994 * 33 43 0 0 chr18 31323375 31323422 -55354126 + AT_rich Low_complexity Low_complexity 1 47 0 592 250 78 39 chr18 31323492 31323824 -55353724 + LTR37A LTR ERV1 82 426 0 541 324 54 12 chr18 31324028 31324269 -55353279 + HAL1 LINE L1 4 254 -2253 681 105 0 0 chr18 31324362 31324457 -55353091 - AluS SINE Alu -217 95 1 2718 207 29 13 chr18 31324600 31325219 -55352329 + L1MB7 LINE L1 4773 5401 -745 1312 214 97 103 chr18 31325219 31325921 -55351627 + LTR1B LTR ERV1 1 698 -128 1378 258 37 6 chr18 31325925 31326409 -55351139 - L1 LINE L1 -2943 3203 2705 204 158 0 0 chr18 31326581 31326619 -55350929 + (TATATG)n Simple_repeat Simple_repeat 2 39 0 1323 225 23 6 chr18 31326622 31326964 -55350584 + L1MB7 LINE L1 5837 6184 0 22 56 0 0 chr18 31326991 31327027 -55350521 + AT_rich Low_complexity Low_complexity 1 36 0 219 375 10 0 chr18 31327616 31327712 -55349836 - MIR3 SINE MIR -19 189 93 21 0 0 0 chr18 31327950 31327971 -55349577 + AT_rich Low_complexity Low_complexity 1 21 0 1820 142 10 7 chr18 31329067 31329376 -55348172 + AluSg SINE Alu 1 310 0 2112 122 30 28 chr18 31329392 31329754 -55347794 - THE1B LTR MaLR 0 364 2 899 206 0 10 chr18 31329854 31330058 -55347490 - L1 LINE L1 -3014 3834 3633 348 273 127 9 chr18 31330201 31330311 -55347237 - L1MDb LINE L1 -5647 762 640 336 193 26 9 chr18 31330337 31330451 -55347097 - L1PA6 LINE L1 -23 6131 6016 * 9566 226 27 31 chr18 31330447 31333030 -55344518 - L1 LINE L1 -4041 2808 119 420 215 43 102 chr18 31333130 31333386 -55344162 + LTR28 LTR ERV1 780 1020 0 250 123 35 0 chr18 31333582 31333639 -55343909 + (TA)n Simple_repeat Simple_repeat 2 60 0 1576 215 68 8 chr18 31333646 31334046 -55343502 + L1MC3 LINE L1 7360 7783 -2 2292 96 3 3 chr18 31334179 31334482 -55343066 + AluSx SINE Alu 1 303 -9 31 44 0 0 chr18 31334855 31334900 -55342648 + AT_rich Low_complexity Low_complexity 1 45 0 543 274 55 20 chr18 31335108 31335309 -55342239 + L1MA9 LINE L1 6059 6266 -46 1401 186 80 43 chr18 31335588 31335964 -55341584 - MLT1B LTR MaLR 0 390 1 1291 256 92 34 chr18 31336279 31336585 -55340963 - MLT1E1 LTR MaLR -4 650 363 1899 101 7 42 chr18 31336585 31336871 -55340677 + AluSx SINE Alu 1 276 -36 342 0 0 0 chr18 31336877 31336915 -55340633 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1291 256 92 34 chr18 31336915 31337171 -55340377 - MLT1E1 LTR MaLR -295 359 1 1812 127 31 21 chr18 31338783 31339074 -55338474 - AluSx SINE Alu 0 312 19 21 0 0 0 chr18 31339618 31339639 -55337909 + AT_rich Low_complexity Low_complexity 1 21 0 226 132 0 0 chr18 31339799 31339837 -55337711 - L1MD3 LINE L1 -2042 5953 5916 1022 190 116 64 chr18 31341104 31341431 -55336117 - MER2 DNA MER2_type 0 344 1 277 394 55 0 chr18 31341479 31341644 -55335904 - MIR3 SINE MIR 0 208 35 375 312 164 11 chr18 31341665 31341934 -55335614 + L2 LINE L2 2155 2464 -850 203 282 127 70 chr18 31342099 31342241 -55335307 + L2 LINE L2 2897 3046 -226 21 0 0 0 chr18 31342283 31342304 -55335244 + AT_rich Low_complexity Low_complexity 1 21 0 387 41 0 0 chr18 31342304 31342353 -55335195 + (CA)n Simple_repeat Simple_repeat 2 50 0 1476 190 26 0 chr18 31342354 31342622 -55334926 - AluJo SINE Alu -37 275 1 256 343 22 44 chr18 31342674 31342811 -55334737 + L2 LINE L2 3176 3309 -4 2594 42 3 3 chr18 31342963 31343273 -55334275 - AluY SINE Alu -1 310 1 22 56 0 0 chr18 31343487 31343523 -55334025 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr18 31343638 31343660 -55333888 + AT_rich Low_complexity Low_complexity 1 22 0 246 235 10 31 chr18 31343673 31343771 -55333777 + L1ME LINE L1 3864 3959 -2187 480 289 64 20 chr18 31343794 31344092 -55333456 - L1M4 LINE L1 -2516 3630 3320 1012 267 67 44 chr18 31344122 31344754 -55332794 + L1ME LINE L1 5027 5667 -497 756 257 36 51 chr18 31344989 31345576 -55331972 + L1M4 LINE L1 2778 4989 -1157 1121 281 127 29 chr18 31345585 31346160 -55331388 + L1MD2 LINE L1 335 897 -5512 2289 247 124 21 chr18 31346161 31347290 -55330258 + L1MD2 LINE L1 1083 2452 -3954 396 275 52 36 chr18 31347363 31347614 -55329934 + L1MD2 LINE L1 3588 3842 -2564 473 189 182 50 chr18 31347617 31347776 -55329772 - L1MD2 LINE L1 -52 6307 6128 3145 256 74 30 chr18 31347817 31349116 -55328432 + L1MD2 LINE L1 3852 5207 -1199 2513 231 78 10 chr18 31349198 31349737 -55327811 + L1MD2 LINE L1 5842 6443 -176 189 0 0 0 chr18 31349737 31349758 -55327790 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2513 231 78 10 chr18 31349758 31349931 -55327617 + L1MD2 LINE L1 6443 6603 -16 195 100 0 0 chr18 31349960 31349990 -55327558 + (A)n Simple_repeat Simple_repeat 1 30 0 681 229 65 9 chr18 31349994 31350208 -55327340 + L1MC/D LINE L1 4472 4697 -1449 1493 226 63 22 chr18 31350232 31350820 -55326728 + L1MC/D LINE L1 4833 5446 -743 327 276 9 9 chr18 31351277 31351393 -55326155 + (TA)n Simple_repeat Simple_repeat 1 116 0 25 31 0 0 chr18 31351492 31351524 -55326024 + AT_rich Low_complexity Low_complexity 1 32 0 1753 207 44 65 chr18 31352110 31352676 -55324872 + MLT2B3 LTR ERVL 1 554 0 31 0 0 0 chr18 31352948 31352979 -55324569 + AT_rich Low_complexity Low_complexity 1 31 0 344 304 6 8 chr18 31353905 31354053 -55323495 - L1MDb LINE L1 -4573 1754 1308 364 231 86 97 chr18 31354209 31354395 -55323153 + L1ME LINE L1 904 1087 -5118 271 295 28 56 chr18 31354461 31354820 -55322728 + L1ME LINE L1 1253 1601 -4795 298 300 12 0 chr18 31354970 31355050 -55322498 + MLT1G1 LTR MaLR 88 168 -381 2014 139 3 7 chr18 31355072 31355419 -55322129 + AluSx SINE Alu 4 349 0 461 321 75 46 chr18 31355486 31355835 -55321713 + MLT1G1 LTR MaLR 237 595 0 745 259 79 22 chr18 31355848 31356341 -55321207 + L1ME LINE L1 2177 2667 -3548 618 271 90 7 chr18 31356365 31356642 -55320906 + L1ME LINE L1 2745 3044 -3171 1475 162 27 19 chr18 31356752 31357056 -55320492 + MSTA LTR MaLR 121 428 0 209 33 33 0 chr18 31357122 31357152 -55320396 + (TTTTG)n Simple_repeat Simple_repeat 3 33 0 356 221 63 11 chr18 31357160 31357255 -55320293 - L1MC4 LINE L1 -527 7515 7416 1686 276 125 41 chr18 31357282 31358179 -55319369 - L1MC4 LINE L1 -719 7323 6352 1278 269 74 25 chr18 31358396 31358947 -55318601 - L1ME2 LINE L1 -239 5925 5348 235 291 71 49 chr18 31358957 31359137 -55318411 - L1ME2 LINE L1 -848 5298 5106 219 69 0 0 chr18 31359137 31359166 -55318382 + (TTA)n Simple_repeat Simple_repeat 2 30 0 235 291 71 49 chr18 31359166 31359311 -55318237 - L1ME2 LINE L1 -1040 5106 4966 615 281 70 13 chr18 31359322 31359635 -55317913 - L1ME2 LINE L1 -1202 4944 4614 1262 231 191 112 chr18 31359654 31360406 -55317142 + MER52A LTR ERV1 663 1474 -281 425 276 19 19 chr18 31360408 31360564 -55316984 + MER52A LTR ERV1 1600 1755 0 547 229 119 5 chr18 31360611 31360812 -55316736 - L1ME2 LINE L1 -1546 4600 4377 387 0 0 0 chr18 31360832 31360875 -55316673 + (TG)n Simple_repeat Simple_repeat 2 44 0 203 190 0 35 chr18 31361004 31361062 -55316486 + (CGGGG)n Simple_repeat Simple_repeat 1 56 0 21 36 0 0 chr18 31361074 31361102 -55316446 + GC_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr18 31361146 31361177 -55316371 + GC_rich Low_complexity Low_complexity 1 31 0 1398 200 52 9 chr18 31361412 31361742 -55315806 + LTR19A LTR ERV1 143 486 0 270 320 0 0 chr18 31361742 31361842 -55315706 - L1ME2 LINE L1 -1834 4312 4213 1432 44 44 0 chr18 31361846 31362029 -55315519 + L1PA5 LINE L1 5964 6154 0 744 241 125 29 chr18 31362165 31362509 -55315039 + LTR37A LTR ERV1 19 395 -31 796 332 63 5 chr18 31362578 31363024 -55314524 - L1ME2 LINE L1 -2061 4085 3614 306 243 0 0 chr18 31363511 31363614 -55313934 + GA-rich Low_complexity Low_complexity 2 104 0 387 325 7 13 chr18 31363768 31363922 -55313626 + MLT1K LTR MaLR 431 583 -5 201 39 0 0 chr18 31364301 31364327 -55313221 + (T)n Simple_repeat Simple_repeat 1 26 0 1816 180 13 0 chr18 31364639 31364945 -55312603 - AluSx SINE Alu -2 310 1 24 0 0 0 chr18 31364952 31364976 -55312572 + AT_rich Low_complexity Low_complexity 1 24 0 2288 110 62 3 chr18 31365255 31365611 -55311937 - MER51B LTR ERV1 0 377 1 2712 161 43 51 chr18 31365613 31366523 -55311025 - MER51B-int LTR ERV1 -1 7815 6747 3623 125 22 2 chr18 31366623 31367397 -55310151 - MER51B-int LTR ERV1 -1076 6461 5625 392 138 106 32 chr18 31367393 31367487 -55310061 - MER51B-int LTR ERV1 -2188 5349 5249 * 1874 127 20 16 chr18 31367486 31367872 -55309676 - MER51-int LTR ERV1 -2572 2645 2210 2148 157 64 12 chr18 31367877 31368297 -55309251 - MER51-int LTR ERV1 -3261 1956 1515 * 2687 156 65 4 chr18 31368296 31368752 -55308796 - MER51-int LTR ERV1 -4551 3265 2838 210 71 0 0 chr18 31368752 31368780 -55308768 + (TA)n Simple_repeat Simple_repeat 1 28 0 2687 156 65 4 chr18 31368780 31369066 -55308482 - MER51-int LTR ERV1 -4978 2838 2336 2337 115 42 3 chr18 31369110 31369466 -55308082 + LTR10A LTR ERV1 178 547 -62 991 72 60 0 chr18 31369480 31369646 -55307902 - MER51-int LTR ERV1 -5831 1985 1810 763 165 28 97 chr18 31369646 31369822 -55307726 - MER4A LTR ERV1 -129 535 372 2507 138 15 30 chr18 31369929 31370328 -55307220 - MER51-int LTR ERV1 -6321 1495 1102 2086 130 0 0 chr18 31370328 31370628 -55306920 - AluSg SINE Alu -10 300 1 2507 138 15 30 chr18 31370628 31370690 -55306858 - MER51-int LTR ERV1 -6714 1102 1041 755 176 31 37 chr18 31370690 31370893 -55306655 - LTR10A LTR ERV1 0 609 366 1169 84 50 39 chr18 31370993 31371172 -55306376 - MER51B-int LTR ERV1 -7635 181 1 1723 127 112 26 chr18 31371172 31371519 -55306029 - MER51B LTR ERV1 0 377 1 429 336 81 25 chr18 31372856 31373177 -55304371 + HAL1 LINE L1 3 341 -2166 264 297 33 0 chr18 31373313 31373404 -55304144 + HAL1 LINE L1 1660 1753 -754 31 58 0 0 chr18 31373820 31373872 -55303676 + AT_rich Low_complexity Low_complexity 1 52 0 237 338 121 30 chr18 31374414 31374612 -55302936 - L2 LINE L2 -1405 1909 1694 1085 210 33 61 chr18 31375577 31376002 -55301546 + MLT2B1 LTR ERVL 1 483 -37 1082 160 50 6 chr18 31376004 31376320 -55301228 - L1MA8 LINE L1 -308 5872 5618 3617 161 32 33 chr18 31376321 31376806 -55300742 + L1M2 LINE L1 4607 5091 -1221 2140 129 56 8 chr18 31376806 31377163 -55300385 - THE1C LTR MaLR 0 375 2 3617 161 32 33 chr18 31377163 31377685 -55299863 + L1M2 LINE L1 5091 5598 -714 2135 136 0 0 chr18 31378210 31378505 -55299043 - AluSx SINE Alu -17 295 1 23 0 0 0 chr18 31379570 31379593 -55297955 + AT_rich Low_complexity Low_complexity 1 23 0 27 62 0 0 chr18 31380981 31381029 -55296519 + AT_rich Low_complexity Low_complexity 1 48 0 27 0 0 0 chr18 31381346 31381373 -55296175 + AT_rich Low_complexity Low_complexity 1 27 0 963 307 30 15 chr18 31381916 31382255 -55295293 + MLT1I LTR MaLR 58 401 -8 1923 137 9 37 chr18 31382272 31382593 -55294955 + AluSx SINE Alu 1 312 0 283 367 22 0 chr18 31383414 31383504 -55294044 - L2 LINE L2 -1 3312 3221 21 36 0 0 chr18 31383821 31383849 -55293699 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr18 31383862 31383885 -55293663 + AT_rich Low_complexity Low_complexity 1 23 0 212 195 24 0 chr18 31386595 31386636 -55290912 + CT-rich Low_complexity Low_complexity 2 43 0 225 333 17 78 chr18 31387214 31387394 -55290154 - MLT1L LTR MaLR -446 169 1 182 358 32 32 chr18 31387508 31387603 -55289945 - L2 LINE L2 -1 3312 3218 193 125 21 21 chr18 31387980 31388028 -55289520 + GA-rich Low_complexity Low_complexity 3 50 0 22 0 0 0 chr18 31388162 31388184 -55289364 + AT_rich Low_complexity Low_complexity 1 22 0 269 351 34 7 chr18 31388572 31388720 -55288828 + MLT1I LTR MaLR 1 152 -257 25 31 0 0 chr18 31392115 31392147 -55285401 + AT_rich Low_complexity Low_complexity 1 32 0 27 49 0 0 chr18 31392187 31392228 -55285320 + AT_rich Low_complexity Low_complexity 1 41 0 329 186 69 59 chr18 31392252 31392354 -55285194 + L1M4 LINE L1 4477 4579 -1567 358 281 79 79 chr18 31392510 31392738 -55284810 + L1M4 LINE L1 4799 5026 -1120 270 265 78 0 chr18 31392875 31392977 -55284571 + L1MEd LINE L1 924 1033 -5086 460 321 129 18 chr18 31443168 31443448 -55234100 - L2 LINE L2 -573 2741 2431 2953 120 17 14 chr18 31443928 31444522 -55233026 + L1PA10 LINE L1 5471 6088 -43 21 0 0 0 chr18 31444771 31444792 -55232756 + AT_rich Low_complexity Low_complexity 1 21 0 1245 89 0 0 chr18 31445216 31445374 -55232174 - AluY SINE Alu -17 294 137 668 26 0 0 chr18 31445375 31445452 -55232096 + L1PA4 LINE L1 6013 6089 -66 27 0 0 0 chr18 31445452 31445479 -55232069 + AT_rich Low_complexity Low_complexity 1 27 0 1341 147 114 106 chr18 31445912 31446299 -55231249 - MLT1B LTR MaLR 0 390 1 404 263 135 88 chr18 31446311 31446741 -55230807 + LTR16A1 LTR ERVL 1 450 -7 180 250 0 23 chr18 31446778 31446822 -55230726 + MIR SINE MIR 220 262 0 3282 178 44 1 chr18 31448462 31449164 -55228384 - L1 LINE L1 -1159 4987 4256 2053 131 3 3 chr18 31451001 31451307 -55226241 + THE1C-int LTR MaLR 1275 1580 0 1596 139 79 57 chr18 31451307 31451674 -55225874 + THE1C LTR MaLR 1 375 0 1544 210 35 18 chr18 31451674 31452017 -55225531 - MLT1C LTR MaLR -16 451 103 5002 155 5 11 chr18 31452142 31452992 -55224556 + Tigger1 DNA MER2_type 1566 2410 -8 342 0 0 0 chr18 31453032 31453070 -55224478 + (TG)n Simple_repeat Simple_repeat 2 39 0 356 371 28 0 chr18 31453071 31453249 -55224299 - LTR16B LTR ERVL -8 456 274 24 32 0 0 chr18 31453430 31453461 -55224087 + AT_rich Low_complexity Low_complexity 1 31 0 251 339 18 9 chr18 31453929 31454041 -55223507 + L2 LINE L2 2151 2263 -1051 384 291 29 76 chr18 31454051 31454261 -55223287 - MIR SINE MIR -13 249 50 1400 156 56 7 chr18 31454261 31454531 -55223017 + AluSx SINE Alu 1 283 -29 250 261 0 0 chr18 31454550 31454647 -55222901 + AluY SINE Alu 204 281 -20 43 71 0 0 chr18 31454758 31454843 -55222705 + GC_rich Low_complexity Low_complexity 1 85 0 1256 251 50 59 chr18 31455026 31455448 -55222100 + MLT1D LTR MaLR 1 418 -87 367 212 82 0 chr18 31455444 31455529 -55222019 - MLT1A1 LTR MaLR -102 263 172 * 3719 84 4 4 chr18 31455560 31456050 -55221498 + THE1A-int LTR MaLR 1083 1572 -8 514 140 160 0 chr18 31456059 31456159 -55221389 + THE1A LTR MaLR 3 118 -237 2073 109 10 3 chr18 31457054 31457383 -55220165 + AluSx SINE Alu 3 312 0 5216 172 10 9 chr18 31459026 31460131 -55217417 + L1PB3 LINE L1 5042 6147 -7 721 199 6 0 chr18 31460252 31460418 -55217130 - L1 LINE L1 -2984 4581 4415 875 198 10 0 chr18 31460420 31460612 -55216936 - L1 LINE L1 -1754 4392 4199 3480 199 27 39 chr18 31460625 31461910 -55215638 - L1 LINE L1 -3158 4407 3137 366 262 47 42 chr18 31462013 31462204 -55215344 + L1PA15 LINE L1 5961 6152 -13 807 188 9 33 chr18 31462390 31462603 -55214945 + L1PB4 LINE L1 4358 4565 -1581 * 2661 172 2 4 chr18 31462581 31463058 -55214490 - MSTA-int LTR MaLR -1175 476 1 934 151 0 0 chr18 31463058 31463197 -55214351 - MSTA LTR MaLR 0 428 290 3260 194 6 13 chr18 31463314 31464001 -55213547 + L1PB4 LINE L1 5474 6155 -1 29 28 0 0 chr18 31464110 31464146 -55213402 + AT_rich Low_complexity Low_complexity 1 36 0 2775 172 21 10 chr18 31464150 31464731 -55212817 - L1MA6 LINE L1 -7 6293 5707 642 249 139 8 chr18 31464832 31465069 -55212479 - MER90 LTR ERV1 -253 322 55 25 0 0 0 chr18 31465157 31465182 -55212366 + AT_rich Low_complexity Low_complexity 1 25 0 550 265 60 0 chr18 31466648 31466799 -55210749 - MIR SINE MIR -12 250 91 278 180 16 0 chr18 31466815 31466876 -55210672 + (TA)n Simple_repeat Simple_repeat 1 62 0 282 194 32 0 chr18 31467706 31467768 -55209780 - MER112 DNA MER1_type -194 66 3 203 188 0 0 chr18 31468402 31468434 -55209114 + MIR SINE MIR 219 250 -12 233 132 0 19 chr18 31468656 31468709 -55208839 + (TTTA)n Simple_repeat Simple_repeat 2 53 0 4339 209 14 6 chr18 31468862 31469803 -55207745 - L1PA12 LINE L1 -4509 3072 2125 553 156 11 72 chr18 31469816 31469996 -55207552 - L1PA12 LINE L1 -5426 2155 1987 3487 202 20 28 chr18 31470253 31470848 -55206700 - L1 LINE L1 -1853 4293 3704 2177 109 3 0 chr18 31470848 31471142 -55206406 - AluSp SINE Alu -18 295 1 3487 202 20 28 chr18 31471142 31471374 -55206174 - L1 LINE L1 -2442 3704 3472 3623 136 89 19 chr18 31471650 31472378 -55205170 - LTR49-int LTR ERV1 -1671 4927 4149 1701 136 8 0 chr18 31472378 31472635 -55204913 - LTR49-int LTR ERV1 -6292 466 208 213 39 0 0 chr18 31472636 31472662 -55204886 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 901 260 72 14 chr18 31472685 31472962 -55204586 - LTR49-int LTR ERV1 -4119 2212 1920 857 130 7 0 chr18 31473420 31473558 -55203990 - L1PA13 LINE L1 -4 6159 6021 213 409 0 11 chr18 31473775 31473868 -55203680 + MIR SINE MIR 20 111 -97 25 0 0 0 chr18 31474806 31474831 -55202717 + AT_rich Low_complexity Low_complexity 1 25 0 370 183 17 0 chr18 31477512 31477572 -55199976 - AluJ/FLAM SINE Alu -239 63 3 378 326 49 56 chr18 31477578 31477882 -55199666 - L1MCa LINE L1 -3444 2982 2681 692 181 108 24 chr18 31478533 31478699 -55198849 - MLT1B LTR MaLR -5 385 206 964 291 21 0 chr18 31481023 31481257 -55196291 - MIR SINE MIR 0 262 24 1913 216 25 2 chr18 31481484 31481882 -55195666 - MST-int LTR MaLR -243 1408 1002 238 236 0 0 chr18 31481982 31482037 -55195511 + MER3 DNA MER1_type 155 209 0 284 241 36 0 chr18 31482995 31483078 -55194470 - L1ME LINE L1 -303 5818 5733 205 309 79 20 chr18 31483544 31483696 -55193852 - L2 LINE L2 -1269 2045 1885 263 319 89 22 chr18 31484352 31484487 -55193061 - MIR SINE MIR 0 262 119 382 304 9 27 chr18 31484857 31484969 -55192579 + MIR SINE MIR 33 142 -66 529 240 48 16 chr18 31485035 31485160 -55192388 + L2 LINE L2 3177 3305 -8 1412 208 46 9 chr18 31485914 31486311 -55191237 - L1MCa LINE L1 -3947 2479 2125 237 160 0 64 chr18 31486443 31486537 -55191011 + (TA)n Simple_repeat Simple_repeat 1 88 0 559 222 0 27 chr18 31486550 31486735 -55190813 + (TA)n Simple_repeat Simple_repeat 1 180 0 1208 188 28 15 chr18 31487602 31488277 -55189271 - L1MA5 LINE L1 -300 6702 5867 917 177 45 25 chr18 31488483 31488681 -55188867 + Tigger7 DNA MER2_type 329 530 -1957 448 235 29 20 chr18 31488648 31488750 -55188798 + Tigger7 DNA MER2_type 2385 2487 0 * 8276 185 14 22 chr18 31489785 31491543 -55186005 - L1MA5 LINE L1 -3962 2887 1144 1153 216 42 90 chr18 31491650 31491958 -55185590 + MLT2B1 LTR ERVL 182 472 -48 203 0 37 0 chr18 31491958 31491985 -55185563 + (TAGA)n Simple_repeat Simple_repeat 1 28 0 1153 216 42 90 chr18 31491985 31492032 -55185516 + MLT2B1 LTR ERVL 472 520 0 22 0 0 0 chr18 31492455 31492477 -55185071 + AT_rich Low_complexity Low_complexity 1 22 0 190 277 227 8 chr18 31493060 31493179 -55184369 - MIR SINE MIR -1 261 117 31 0 0 0 chr18 31495497 31495528 -55182020 + AT_rich Low_complexity Low_complexity 1 31 0 316 71 36 0 chr18 31496398 31496454 -55181094 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 1866 131 7 20 chr18 31496896 31497193 -55180355 + AluSx SINE Alu 1 293 -19 397 257 110 15 chr18 31497789 31497925 -55179623 - MER3 DNA MER1_type -60 149 1 240 200 49 108 chr18 31498769 31498954 -55178594 + MER112 DNA MER1_type 4 177 -83 794 184 146 0 chr18 31499128 31499286 -55178262 - MSTA LTR MaLR -247 181 1 762 218 23 36 chr18 31499286 31499568 -55177980 - MLT1A1 LTR MaLR -7 358 1 4608 170 43 35 chr18 31499688 31500805 -55176743 - L1MA8 LINE L1 -5 6286 5170 516 210 19 98 chr18 31500908 31501113 -55176435 + L1ME LINE L1 5510 5698 -468 23 0 0 0 chr18 31501532 31501555 -55175993 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr18 31502477 31502497 -55175051 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 762 186 81 31 chr18 31502520 31502681 -55174867 - AluJo SINE Alu -138 174 6 25 0 0 0 chr18 31502837 31502862 -55174686 + AT_rich Low_complexity Low_complexity 1 25 0 774 307 73 52 chr18 31503019 31503504 -55174044 + L2 LINE L2 2579 3064 -208 30 27 0 0 chr18 31505174 31505211 -55172337 + AT_rich Low_complexity Low_complexity 1 37 0 279 135 29 48 chr18 31505211 31505315 -55172233 + (TA)n Simple_repeat Simple_repeat 1 102 0 219 167 0 0 chr18 31505415 31505457 -55172091 + CT-rich Low_complexity Low_complexity 3 44 0 1292 144 0 108 chr18 31505459 31505736 -55171812 + L1MA9 LINE L1 5698 5944 -368 1928 161 3 0 chr18 31505878 31506214 -55171334 - L1P LINE L1 -1628 4518 4182 * 3693 124 5 0 chr18 31506207 31506763 -55170785 + L1P LINE L1 3630 4188 -1958 306 146 0 0 chr18 31506946 31506994 -55170554 - L1P4 LINE L1 -550 5616 5569 2111 139 32 21 chr18 31507078 31507652 -55169896 - L1PA16 LINE L1 -552 5614 5041 1311 138 134 0 chr18 31507650 31507881 -55169667 + L1PA16 LINE L1 5623 5884 -282 * 3079 138 28 41 chr18 31508715 31509280 -55168268 + MER34B LTR ERV1 1 558 -7 411 288 80 31 chr18 31509365 31509528 -55168020 + MIR3 SINE MIR 19 189 -19 23 33 0 0 chr18 31509756 31509786 -55167762 + AT_rich Low_complexity Low_complexity 1 30 0 12241 46 7 1 chr18 31510002 31511551 -55165997 + L1P LINE L1 2925 4481 -1665 494 252 58 0 chr18 31511548 31511703 -55165845 - L1M2 LINE L1 -4527 2322 2159 * 765 214 14 33 chr18 31511807 31511972 -55165576 + MER31-int LTR ERV1 846 1008 -3928 1207 223 19 45 chr18 31511972 31512282 -55165266 + AluJo SINE Alu 3 304 -8 765 214 14 33 chr18 31512282 31512326 -55165222 + MER31-int LTR ERV1 1008 1051 -3885 372 22 0 0 chr18 31512362 31512407 -55165141 + (TG)n Simple_repeat Simple_repeat 2 46 0 1858 150 83 3 chr18 31512444 31512783 -55164765 + Ricksha DNA DNA 123 488 -1558 536 242 13 27 chr18 31512649 31512798 -55164750 + MLT2D LTR ERVL 9 155 -398 * 1614 174 17 30 chr18 31512800 31513099 -55164449 + Ricksha DNA DNA 1188 1482 -1764 393 370 32 25 chr18 31513353 31513758 -55163790 + LTR33 LTR ERVL 105 512 -9 4518 252 12 15 chr18 31515131 31516419 -55161129 - L1P LINE L1 -1736 4410 3127 30 69 0 0 chr18 31516848 31516906 -55160642 + AT_rich Low_complexity Low_complexity 1 58 0 2986 230 33 43 chr18 31516959 31518564 -55158984 + L1MB1 LINE L1 4451 6039 -129 1510 230 17 41 chr18 31518767 31519184 -55158364 - MER92B LTR ERV1 -229 407 1 1953 259 53 25 chr18 31519184 31519613 -55157935 - L1MCb LINE L1 -5163 882 428 1899 229 30 40 chr18 31519613 31520138 -55157410 + MLT2B1 LTR ERVL 1 520 0 1953 259 53 25 chr18 31520138 31520353 -55157195 - L1MCb LINE L1 -5617 428 220 1046 137 17 6 chr18 31520367 31520542 -55157006 + AluSq SINE Alu 2 178 -135 2197 103 3 0 chr18 31520653 31520953 -55156595 - AluSq SINE Alu -8 305 5 264 333 7 67 chr18 31520975 31521110 -55156438 + MLT1H LTR MaLR 227 353 -196 1904 278 24 5 chr18 31522109 31522757 -55154791 - L1M2 LINE L1 -4904 2305 1403 1529 240 49 60 chr18 31523096 31523667 -55153881 - L1ME1 LINE L1 -20 6146 5582 219 36 0 0 chr18 31523757 31523785 -55153763 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 689 212 15 8 chr18 31523792 31523924 -55153624 - FRAM SINE Alu -35 141 9 2229 112 6 6 chr18 31526462 31526774 -55150774 - AluSx SINE Alu 0 312 1 497 261 146 24 chr18 31527367 31527532 -55150016 + MER5A DNA MER1_type 4 188 -1 746 221 26 7 chr18 31527819 31527973 -55149575 - MLT1D LTR MaLR -348 157 1 958 279 57 30 chr18 31527974 31528307 -55149241 + L2 LINE L2 2972 3313 0 213 347 32 0 chr18 31528971 31529066 -55148482 + MIR SINE MIR 65 162 -100 4059 19 0 0 chr18 31529910 31530379 -55147169 + L1PA2 LINE L1 5687 6155 0 358 80 94 7 chr18 31530736 31530874 -55146674 + (TA)n Simple_repeat Simple_repeat 1 150 0 30 0 0 0 chr18 31531182 31531212 -55146336 + AT_rich Low_complexity Low_complexity 1 30 0 24 32 0 0 chr18 31531340 31531371 -55146177 + AT_rich Low_complexity Low_complexity 1 31 0 344 233 76 96 chr18 31532849 31533098 -55144450 + L1ME4a LINE L1 5873 6116 -5 319 222 42 85 chr18 31533448 31533660 -55143888 - L1MEc LINE L1 -4164 2232 2030 28 29 0 0 chr18 31533747 31533782 -55143766 + AT_rich Low_complexity Low_complexity 1 35 0 2305 64 0 0 chr18 31533948 31534258 -55143290 - AluY SINE Alu 0 310 1 321 231 115 39 chr18 31534324 31534454 -55143094 + L1ME4a LINE L1 5817 5956 -165 256 231 0 15 chr18 31534501 31534566 -55142982 + (TA)n Simple_repeat Simple_repeat 2 65 0 1302 233 0 18 chr18 31534770 31535053 -55142495 + AluJo SINE Alu 1 278 -34 191 36 36 0 chr18 31535142 31535170 -55142378 + (TA)n Simple_repeat Simple_repeat 1 29 0 5786 217 161 8 chr18 31535428 31536327 -55141221 + L1PA8 LINE L1 1572 2333 -3813 5843 96 25 13 chr18 31536327 31537603 -55139945 + L1PA11 LINE L1 4889 6174 0 5786 217 161 8 chr18 31537603 31538534 -55139014 + L1PA8 LINE L1 2333 3681 -2465 1063 117 0 0 chr18 31541627 31541798 -55135750 - L1P LINE L1 -2963 3183 3013 * 10471 115 18 14 chr18 31541793 31544263 -55133285 + L1PA8 LINE L1 3635 6115 -57 2335 39 7 4 chr18 31545838 31546119 -55131429 + AluY SINE Alu 20 301 -10 277 197 2 55 chr18 31546158 31546245 -55131303 + AluS SINE Alu 3 68 -235 403 304 52 32 chr18 31546579 31546829 -55130719 - L1PBa LINE L1 -6606 257 3 4777 166 9 3 chr18 31547166 31548047 -55129501 + L1MA4A LINE L1 5417 6302 -1 230 132 38 19 chr18 31548214 31548262 -55129286 - MLT2B1 LTR ERVL -2 518 470 1465 203 41 17 chr18 31548262 31548607 -55128941 - MLT1C LTR MaLR 0 467 115 189 171 0 0 chr18 31548687 31548722 -55128826 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 8704 214 14 8 chr18 31548866 31549001 -55128547 + L1 LINE L1 3191 3324 -2822 803 226 79 71 chr18 31549001 31549341 -55128207 + MER2 DNA MER2_type 2 344 0 8704 214 14 8 chr18 31549341 31551271 -55126277 + L1 LINE L1 3324 5268 -878 396 0 0 0 chr18 31551307 31551351 -55126197 + (CA)n Simple_repeat Simple_repeat 1 44 0 2116 194 24 10 chr18 31551913 31552620 -55124928 + L1M3 LINE L1 4899 5616 -567 1539 210 0 0 chr18 31552620 31552901 -55124647 + AluJo SINE Alu 1 281 -31 1780 144 87 31 chr18 31552917 31553272 -55124276 - THE1C LTR MaLR 0 375 1 1213 179 40 5 chr18 31553316 31553540 -55124008 - MSTB LTR MaLR 0 426 195 457 165 0 24 chr18 31553540 31553625 -55123923 + L1P LINE L1 3989 4071 -2075 1941 109 39 7 chr18 31554009 31554293 -55123255 + AluSx SINE Alu 5 297 -15 952 312 121 19 chr18 31554666 31555228 -55122320 - L2 LINE L2 -1 3312 2678 216 0 0 0 chr18 31555586 31555610 -55121938 + (CTAGT)n Simple_repeat Simple_repeat 5 28 0 1004 317 119 2 chr18 31555621 31556041 -55121507 - L2 LINE L2 -661 2653 2185 189 372 104 30 chr18 31556072 31556236 -55121312 + L2 LINE L2 2801 2976 -338 1635 207 113 5 chr18 31557216 31557607 -55119941 - MLT1D LTR MaLR 0 505 73 1157 220 128 44 chr18 31558555 31558986 -55118562 + MLT1C LTR MaLR 1 467 0 1598 273 36 8 chr18 31559251 31559778 -55117770 + L1MCb LINE L1 580 1121 -4924 608 242 28 40 chr18 31559783 31560031 -55117517 + L1MCb LINE L1 2565 2809 -3936 2229 213 53 20 chr18 31560327 31561109 -55116439 + L1MA10 LINE L1 4765 5585 -727 1551 196 24 7 chr18 31561109 31561400 -55116148 - MSTA LTR MaLR 0 428 133 3017 193 45 47 chr18 31561408 31562160 -55115388 + L1MA10 LINE L1 5582 6332 -2 21 0 0 0 chr18 31562174 31562195 -55115353 + AT_rich Low_complexity Low_complexity 1 21 0 1322 98 0 6 chr18 31562767 31562940 -55114608 + AluSq SINE Alu 126 297 -16 309 330 52 56 chr18 31563693 31563963 -55113585 + L2 LINE L2 3027 3295 -18 593 237 89 114 chr18 31564454 31564804 -55112744 + MER41D LTR ERV1 212 555 -2 479 305 12 12 chr18 31564828 31564992 -55112556 - LTR33 LTR ERVL -321 200 37 915 285 124 19 chr18 31566669 31567048 -55110500 + L2 LINE L2 1901 2319 -995 601 304 48 33 chr18 31567048 31567318 -55110230 - MLT1I LTR MaLR -13 396 123 698 228 44 28 chr18 31567318 31567498 -55110050 + L2 LINE L2 3128 3310 -3 338 319 43 33 chr18 31567570 31567780 -55109768 - L1M4 LINE L1 -3147 3181 2970 1726 214 32 18 chr18 31568142 31568576 -55108972 + L1M1 LINE L1 16 455 -7110 653 191 82 46 chr18 31568787 31569069 -55108479 - L1 LINE L1 -2760 3386 3095 4556 241 32 22 chr18 31569072 31571206 -55106342 - L1M4 LINE L1 -3387 2941 819 3816 176 12 6 chr18 31571233 31571885 -55105663 - L1M4 LINE L1 -4670 658 3 2583 153 8 38 chr18 31572088 31572607 -55104941 + L1MC/D LINE L1 5197 5730 -512 207 0 0 0 chr18 31572607 31572630 -55104918 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2217 95 3 7 chr18 31572633 31572918 -55104630 - AluSg SINE Alu -25 285 2 2583 153 8 38 chr18 31572918 31572960 -55104588 + L1MC/D LINE L1 5732 5744 -498 605 257 88 122 chr18 31572990 31573480 -55104068 + L2 LINE L2 2841 3313 0 21 0 0 0 chr18 31574313 31574334 -55103214 + AT_rich Low_complexity Low_complexity 1 21 0 510 290 91 5 chr18 31574420 31574606 -55102942 - MIR SINE MIR -24 238 37 210 37 0 0 chr18 31575831 31575858 -55101690 + (CAAAC)n Simple_repeat Simple_repeat 3 29 0 752 174 6 17 chr18 31576425 31576597 -55100951 + L1 LINE L1 5219 5388 -758 21 36 0 0 chr18 31576597 31576625 -55100923 + AT_rich Low_complexity Low_complexity 1 28 0 1193 189 12 0 chr18 31578698 31578947 -55098601 + L1MA6 LINE L1 6049 6300 0 21 36 0 0 chr18 31578947 31578975 -55098573 + AT_rich Low_complexity Low_complexity 1 28 0 250 225 28 0 chr18 31579050 31579121 -55098427 - L1MB7 LINE L1 0 6184 6112 1799 111 14 14 chr18 31579157 31579446 -55098102 + AluY SINE Alu 1 289 -22 855 182 23 68 chr18 31580103 31580367 -55097181 + AluJo SINE Alu 56 307 -5 1207 125 60 0 chr18 31580551 31580735 -55096813 - AluSg/x SINE Alu -5 307 113 460 151 14 0 chr18 31580749 31580822 -55096726 - AluSg/x SINE Alu -144 168 95 2003 154 105 0 chr18 31582273 31582643 -55094905 - MSTB LTR MaLR 0 426 18 2093 176 32 20 chr18 31582873 31583277 -55094271 + MSTA LTR MaLR 20 428 0 9488 212 51 21 chr18 31583277 31585720 -55091828 + L1 LINE L1 2494 5009 -1137 331 295 60 60 chr18 31586742 31586908 -55090640 + MIR3 SINE MIR 25 190 -18 467 306 22 0 chr18 31586987 31587121 -55090427 - MIR SINE MIR -62 200 64 788 23 62 0 chr18 31587248 31587378 -55090170 + (TAGA)n Simple_repeat Simple_repeat 4 141 0 2116 185 58 68 chr18 31587379 31587893 -55089655 - MLT2B2 LTR ERVL -3 512 4 462 36 0 0 chr18 31587893 31587949 -55089599 + (TAGA)n Simple_repeat Simple_repeat 2 57 0 291 222 12 123 chr18 31589429 31589591 -55087957 + MIR SINE MIR 61 204 -58 285 304 136 0 chr18 31590096 31590221 -55087327 - MIR SINE MIR -107 155 14 6374 174 24 7 chr18 31590936 31592146 -55085402 + Ricksha DNA DNA 2017 3246 0 341 187 44 178 chr18 31592148 31592463 -55085085 + MER31-int LTR ERV1 1163 1435 -3501 32 26 0 0 chr18 31592463 31592502 -55085046 + AT_rich Low_complexity Low_complexity 1 39 0 313 250 0 62 chr18 31592502 31592598 -55084950 - L1MC4 LINE L1 -1340 6702 6613 41 0 0 0 chr18 31592600 31592641 -55084907 + AT_rich Low_complexity Low_complexity 1 41 0 303 223 21 75 chr18 31592652 31592746 -55084802 + L1MC4 LINE L1 6614 6702 -1340 509 256 94 57 chr18 31592920 31593172 -55084376 + MER31-int LTR ERV1 1704 1945 -2991 2204 54 14 7 chr18 31593172 31593450 -55084098 + AluSg SINE Alu 14 293 -17 509 256 94 57 chr18 31593450 31593764 -55083784 + MER31-int LTR ERV1 1945 2335 -2601 1651 130 11 18 chr18 31593769 31594084 -55083464 - AluY SINE Alu 0 313 1 4912 168 181 60 chr18 31594477 31595863 -55081685 + MER52A LTR ERV1 1 1633 -122 367 301 123 44 chr18 31596671 31596874 -55080674 + L2 LINE L2 3094 3312 -1 1164 214 10 5 chr18 31597872 31597936 -55079612 - L1M4 LINE L1 -872 5274 5212 3635 34 2 0 chr18 31597936 31598374 -55079174 - L1PA4 LINE L1 0 6155 5717 1164 214 10 5 chr18 31598374 31598599 -55078949 - L1M4 LINE L1 -934 5212 4979 839 121 15 0 chr18 31598601 31598733 -55078815 - L1MA1 LINE L1 0 6302 6169 1952 238 8 4 chr18 31598760 31599235 -55078313 - L1M4 LINE L1 -3114 3032 2556 287 167 14 0 chr18 31599339 31599404 -55078144 - MSTB LTR MaLR -355 71 1 2563 209 7 50 chr18 31599414 31600121 -55077427 - L1 LINE L1 -2149 3997 3321 1442 199 85 53 chr18 31600121 31600662 -55076886 + MLT2A2 LTR ERVL 1 554 0 3193 243 74 7 chr18 31600662 31601664 -55075884 - L1 LINE L1 -2821 3325 2257 855 146 49 0 chr18 31601664 31601808 -55075740 - MSTB LTR MaLR 0 426 276 461 317 59 31 chr18 31603642 31603929 -55073619 + L2 LINE L2 1804 2098 -1216 1393 189 85 51 chr18 31603931 31604018 -55073530 - MER67C LTR ERV1 -4 510 427 1834 22 5 5 chr18 31604018 31604241 -55073307 - L1PA2 LINE L1 0 6155 5933 1393 189 85 51 chr18 31604241 31604601 -55072947 - MER67C LTR ERV1 -87 427 83 3499 134 39 10 chr18 31604781 31605394 -55072154 + Tigger3(Golem) DNA MER2_type 2328 2958 -71 4612 78 5 1 chr18 31605405 31606130 -55071418 + L1PA8 LINE L1 5147 5873 -299 411 158 0 0 chr18 31606256 31606332 -55071216 - L1MC2 LINE L1 -492 5852 5777 2364 120 94 5 chr18 31606567 31606960 -55070588 + MSTA LTR MaLR 1 428 0 200 194 0 0 chr18 31607457 31607493 -55070055 + (CATA)n Simple_repeat Simple_repeat 4 39 0 932 130 0 7 chr18 31608409 31608547 -55069001 + AluSq/x SINE Alu 3 139 -174 2547 268 79 17 chr18 31608883 31609849 -55067699 + L1MEc LINE L1 49 1074 -5322 259 164 0 18 chr18 31609849 31609904 -55067644 + MER116 DNA Mariner 27 80 0 30 0 0 0 chr18 31610026 31610056 -55067492 + AT_rich Low_complexity Low_complexity 1 30 0 2755 232 132 16 chr18 31610074 31611481 -55066067 + L1MEc LINE L1 1974 3536 -2679 1574 193 154 14 chr18 31611482 31611840 -55065708 + MLT2C2 LTR ERVL 6 413 -51 329 221 41 0 chr18 31611848 31611970 -55065578 + (TA)n Simple_repeat Simple_repeat 2 128 0 263 95 32 32 chr18 31611991 31612054 -55065494 + (TA)n Simple_repeat Simple_repeat 2 64 0 351 123 0 31 chr18 31612056 31612121 -55065427 + MLT2C2 LTR ERVL 458 520 0 310 150 38 38 chr18 31612122 31612202 -55065346 + HERVL-C2 LTR ERVL 2 81 -5573 749 296 42 21 chr18 31612217 31612501 -55065047 + HERVL-C2 LTR ERVL 211 500 -5264 * 2138 186 4 61 chr18 31612489 31612951 -55064597 + ERVL LTR ERVL 3477 3912 -1852 222 326 84 0 chr18 31613488 31613583 -55063965 + L2 LINE L2 3155 3257 -15 1228 175 0 9 chr18 31613948 31614176 -55063372 + L1PA15 LINE L1 5940 6165 0 378 307 92 18 chr18 31614199 31614362 -55063186 - L1ME LINE L1 -530 5632 5458 263 274 0 0 chr18 31614422 31614484 -55063064 - MIR SINE MIR -123 139 78 1847 161 117 31 chr18 31614970 31615362 -55062186 + MSTA LTR MaLR 1 426 -2 411 240 93 49 chr18 31615667 31615850 -55061698 + MIR SINE MIR 71 261 -1 2439 57 7 0 chr18 31616019 31616318 -55061230 + AluY SINE Alu 3 303 -8 1988 115 3 7 chr18 31616727 31617013 -55060535 - AluSx SINE Alu -27 285 1 2216 119 7 0 chr18 31617025 31617335 -55060213 - AluSx SINE Alu 0 312 1 3593 208 98 55 chr18 31617778 31618842 -55058706 - LTR28 LTR ERV1 -20 1735 1 278 146 0 0 chr18 31620734 31620775 -55056773 - L2 LINE L2 -15 3298 3258 187 250 20 0 chr18 31620862 31620962 -55056586 + (TA)n Simple_repeat Simple_repeat 1 102 0 237 176 32 72 chr18 31620965 31621090 -55056458 + (CATATA)n Simple_repeat Simple_repeat 6 125 0 194 364 45 9 chr18 31621177 31621287 -55056261 - L2 LINE L2 -219 3053 2940 2651 22 0 9 chr18 31621841 31622158 -55055390 + AluYb8 SINE Alu 1 314 -4 605 143 0 11 chr18 31622158 31622249 -55055299 - MLT1B LTR MaLR -298 92 3 181 322 102 34 chr18 31622294 31622412 -55055136 + L2 LINE L2 3169 3294 -19 678 71 10 20 chr18 31622495 31622594 -55054954 + AluSp/q SINE Alu 206 303 -10 21 0 0 0 chr18 31622605 31622626 -55054922 + AT_rich Low_complexity Low_complexity 1 21 0 1539 82 17 35 chr18 31622649 31622880 -55054668 - L1PA7 LINE L1 -3 6151 5925 8383 162 29 8 chr18 31622948 31624453 -55053095 + Tigger1 DNA MER2_type 1 1536 -882 617 214 107 78 chr18 31624554 31624797 -55052751 - MLT1A2 LTR MaLR -140 250 1 599 258 42 81 chr18 31624799 31625109 -55052439 + L1ME2 LINE L1 5750 6047 -117 260 250 68 57 chr18 31625561 31625649 -55051899 + MER89-int LTR ERV1 884 972 -5829 556 279 50 22 chr18 31627935 31628114 -55049434 - MIR SINE MIR -78 184 1 366 307 55 8 chr18 31628298 31628425 -55049123 - MIR SINE MIR -118 144 12 200 185 19 0 chr18 31628995 31629049 -55048499 + GA-rich Low_complexity Low_complexity 4 58 0 21 0 0 0 chr18 31631302 31631323 -55046225 + AT_rich Low_complexity Low_complexity 1 21 0 231 175 48 16 chr18 31631772 31631835 -55045713 + T-rich Low_complexity Low_complexity 1 65 0 23 54 0 0 chr18 31631952 31631989 -55045559 + AT_rich Low_complexity Low_complexity 1 37 0 31 0 0 0 chr18 31632313 31632344 -55045204 + AT_rich Low_complexity Low_complexity 1 31 0 402 21 0 0 chr18 31632537 31632584 -55044964 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 709 169 23 8 chr18 31632586 31632716 -55044832 - AluSc SINE Alu -33 276 145 23 33 0 0 chr18 31632760 31632790 -55044758 + AT_rich Low_complexity Low_complexity 1 30 0 433 186 128 0 chr18 31632820 31632922 -55044626 + MER67D LTR ERV1 4 118 -396 1891 83 0 8 chr18 31632924 31633309 -55044239 + L1PA7 LINE L1 5115 5497 -675 5082 73 1 3 chr18 31633418 31634091 -55043457 + L1PA7 LINE L1 5475 6146 -8 1975 197 30 5 chr18 31634192 31634593 -55042955 + MER67D LTR ERV1 104 514 0 587 224 71 49 chr18 31635879 31636062 -55041486 + MER5A DNA MER1_type 2 188 -1 22 35 0 0 chr18 31637728 31637757 -55039791 + AT_rich Low_complexity Low_complexity 1 29 0 41 66 0 0 chr18 31638491 31638567 -55038981 + AT_rich Low_complexity Low_complexity 1 76 0 1519 193 10 27 chr18 31639436 31639732 -55037816 + AluJb SINE Alu 1 291 -21 839 259 121 16 chr18 31640021 31640234 -55037314 - L1MDa LINE L1 -5595 945 756 3228 198 52 25 chr18 31640234 31641038 -55036510 - LTR1B LTR ERV1 0 826 1 839 259 121 16 chr18 31641038 31641268 -55036280 - L1MDa LINE L1 -5784 756 343 761 130 230 27 chr18 31641889 31642081 -55035467 - MSTA LTR MaLR -153 202 1 4228 169 11 9 chr18 31642081 31642814 -55034734 - MSTA-int LTR MaLR 0 1580 847 503 139 0 12 chr18 31643502 31643588 -55033960 - AluJ/FRAM SINE Alu -9 303 219 810 212 0 6 chr18 31643588 31643758 -55033790 - AluJb SINE Alu -11 301 133 513 287 72 57 chr18 31645812 31646077 -55031471 + MLT1G LTR MaLR 1 269 -321 1642 192 23 7 chr18 31646913 31647038 -55030510 + AluJb SINE Alu 1 122 -190 327 25 0 0 chr18 31647038 31647078 -55030470 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 1642 192 23 7 chr18 31647078 31647259 -55030289 + AluJb SINE Alu 122 312 0 306 0 0 0 chr18 31647996 31648030 -55029518 + (TAA)n Simple_repeat Simple_repeat 2 35 0 316 289 0 0 chr18 31648070 31648153 -55029395 - L2 LINE L2 0 3313 3231 535 291 53 33 chr18 31648190 31648492 -55029056 + L1M4 LINE L1 3110 3417 -2729 28 29 0 0 chr18 31648713 31648748 -55028800 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr18 31648873 31648900 -55028648 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 861 189 0 0 chr18 31648904 31649047 -55028501 - FRAM SINE Alu -33 143 1 303 316 0 0 chr18 31649050 31649145 -55028403 - MIR SINE MIR -45 217 123 240 392 91 10 chr18 31649199 31649508 -55028040 - L2 LINE L2 -609 2705 2372 1569 180 25 0 chr18 31649552 31649836 -55027712 - AluJo SINE Alu -21 291 1 460 361 114 38 chr18 31649936 31650811 -55026737 - L2 LINE L2 -1017 2297 1356 1837 264 142 8 chr18 31651819 31652466 -55025082 - MER50 LTR ERV1 0 734 1 296 98 0 20 chr18 31652643 31652694 -55024854 + Alu SINE Alu 247 296 -5 21 0 0 0 chr18 31652812 31652833 -55024715 + AT_rich Low_complexity Low_complexity 1 21 0 835 144 22 0 chr18 31653640 31653779 -55023769 - MER75 DNA T2_type -372 142 1 224 382 53 0 chr18 31656436 31656512 -55021036 - L2 LINE L2 -47 3225 3146 2302 158 0 11 chr18 31656574 31656954 -55020594 + LTR60 LTR ERV1 3 378 -208 1010 137 14 42 chr18 31657058 31657270 -55020278 + LTR60 LTR ERV1 381 586 0 353 221 58 0 chr18 31657837 31657941 -55019607 + L1M4 LINE L1 4644 4753 -1393 3327 117 36 35 chr18 31657941 31658520 -55019028 + LTR19B LTR ERV1 1 580 0 293 274 9 35 chr18 31658663 31658776 -55018772 - LTR16A1 LTR ERVL 0 457 348 442 246 35 105 chr18 31659013 31659241 -55018307 + MLT1K LTR MaLR 377 588 0 21 0 0 0 chr18 31659650 31659671 -55017877 + AT_rich Low_complexity Low_complexity 1 21 0 288 53 0 0 chr18 31659759 31659797 -55017751 + (CA)n Simple_repeat Simple_repeat 1 38 0 320 196 23 8 chr18 31659797 31659924 -55017624 + (TA)n Simple_repeat Simple_repeat 1 129 0 1197 179 0 31 chr18 31659926 31660155 -55017393 - AluJb SINE Alu -13 299 78 2068 134 39 20 chr18 31660414 31660771 -55016777 - THE1B LTR MaLR 0 364 1 11426 109 3 0 chr18 31660777 31662346 -55015202 - THE1B-int LTR MaLR -6 1574 1 2038 147 33 22 chr18 31662346 31662706 -55014842 - THE1B LTR MaLR 0 364 1 231 133 0 0 chr18 31662901 31662946 -55014602 + (TG)n Simple_repeat Simple_repeat 2 46 0 587 276 69 137 chr18 31664238 31664332 -55013216 - L2 LINE L2 0 3313 3214 1120 165 63 119 chr18 31664332 31664635 -55012913 + AluJo SINE Alu 1 286 -16 587 276 69 137 chr18 31664635 31665167 -55012381 - L2 LINE L2 -99 3214 2731 1927 143 17 0 chr18 31666158 31666445 -55011103 + AluSg SINE Alu 1 292 -18 2185 138 6 9 chr18 31666798 31667145 -55010403 - MER7A DNA MER2_type -2 344 1 1950 130 0 3 chr18 31717741 31718034 -54959514 - AluSx SINE Alu -17 295 4 237 191 15 15 chr18 31718215 31718283 -54959265 + (TA)n Simple_repeat Simple_repeat 1 68 0 678 269 113 34 chr18 31718505 31718989 -54958559 + L1MEc LINE L1 1731 2270 -4126 441 147 27 0 chr18 31718989 31719064 -54958484 - MADE1 DNA Mariner 0 80 4 678 269 113 34 chr18 31719064 31719162 -54958386 + L1MEc LINE L1 2270 2359 -4037 386 335 31 26 chr18 31719301 31719492 -54958056 - MIR SINE MIR 0 262 71 195 286 32 0 chr18 31719560 31719623 -54957925 + L2 LINE L2 2694 2758 -556 249 424 0 0 chr18 31720498 31720597 -54956951 + L2 LINE L2 3137 3235 -37 218 227 45 15 chr18 31721072 31721138 -54956410 + MIR SINE MIR 119 186 -76 255 260 58 39 chr18 31721147 31721251 -54956297 + MIR SINE MIR 127 232 -30 29 47 0 0 chr18 31722172 31722215 -54955333 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr18 31723434 31723462 -54954086 + AT_rich Low_complexity Low_complexity 1 28 0 643 112 35 9 chr18 31724491 31724607 -54952941 - L1MB7 LINE L1 0 6184 6066 1544 203 70 65 chr18 31724975 31725433 -54952115 + MLT1C LTR MaLR 8 467 0 1764 193 99 18 chr18 31725700 31726094 -54951454 - MSTB LTR MaLR 0 426 1 618 219 79 0 chr18 31726276 31726463 -54951085 - MSTC LTR MaLR -179 217 1 801 186 14 22 chr18 31727248 31727605 -54949943 + CT-rich Low_complexity Low_complexity 1 354 0 261 135 0 54 chr18 31727591 31727665 -54949883 + (TCCC)n Simple_repeat Simple_repeat 3 72 0 * 200 108 0 27 chr18 31727663 31727700 -54949848 + (TTTC)n Simple_repeat Simple_repeat 3 38 0 * 204 121 0 52 chr18 31727722 31727780 -54949768 + (TTTC)n Simple_repeat Simple_repeat 2 56 0 234 213 16 0 chr18 31728001 31728062 -54949486 + (TTATA)n Simple_repeat Simple_repeat 5 66 0 349 286 121 0 chr18 31728264 31728404 -54949144 - MER20B DNA MER1_type -371 412 256 1971 114 7 0 chr18 31729364 31729637 -54947911 + AluSc SINE Alu 31 305 -4 24 77 0 0 chr18 31730472 31730524 -54947024 + AT_rich Low_complexity Low_complexity 1 52 0 11769 165 49 23 chr18 31731269 31733624 -54943924 + Tigger1 DNA MER2_type 1 2417 -1 382 289 131 38 chr18 31733746 31734101 -54943447 - L1MC4a LINE L1 -158 5963 5571 183 315 33 22 chr18 31734632 31734724 -54942824 + L2 LINE L2 1851 1943 -1371 222 37 0 0 chr18 31734935 31734962 -54942586 + (GA)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr18 31736457 31736480 -54941068 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr18 31736852 31736882 -54940666 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr18 31737460 31737481 -54940067 + AT_rich Low_complexity Low_complexity 1 21 0 392 314 85 25 chr18 31737660 31737896 -54939652 - MIR SINE MIR 0 262 13 212 264 0 0 chr18 31738114 31738167 -54939381 + MIR SINE MIR 101 153 -109 230 301 41 0 chr18 31738170 31738243 -54939305 + L1M4c LINE L1 1524 1599 -4785 23 0 0 0 chr18 31738252 31738275 -54939273 + AT_rich Low_complexity Low_complexity 1 23 0 1550 205 7 3 chr18 31738994 31739291 -54938257 - AluJb SINE Alu -14 298 1 2442 247 131 39 chr18 31739626 31740758 -54936790 - L1MD3 LINE L1 -2 8038 6825 1070 165 97 11 chr18 31740759 31741098 -54936450 - LTR47A LTR ERVL 0 452 1 1994 268 133 43 chr18 31741169 31742288 -54935260 - L1MC4a LINE L1 -1190 6618 5399 1203 252 127 26 chr18 31742311 31742853 -54934695 + L2 LINE L2 2474 3060 -253 814 118 21 28 chr18 31743433 31743577 -54933971 + MER30 DNA MER1_type 2 144 -86 9867 112 13 3 chr18 31743591 31745829 -54931719 - L1PA8A LINE L1 -20 6111 3859 734 144 0 0 chr18 31745829 31745933 -54931615 + MER30 DNA MER1_type 127 230 0 273 308 43 52 chr18 31746047 31746243 -54931305 - L1MC4a LINE L1 -1306 4840 4647 1324 227 7 20 chr18 31746243 31746547 -54931001 - AluJo SINE Alu -2 300 1 273 308 43 52 chr18 31746547 31746678 -54930870 - L1MC4a LINE L1 -1499 4647 4516 22 0 0 0 chr18 31747810 31747832 -54929716 + AT_rich Low_complexity Low_complexity 1 22 0 781 203 25 13 chr18 31748058 31748216 -54929332 + MER5B DNA MER1_type 2 161 -17 212 342 13 13 chr18 31748419 31748498 -54929050 - L2 LINE L2 -3 3269 3191 1920 193 18 26 chr18 31749963 31750352 -54927196 + LTR32 LTR ERVL 15 400 -71 32 75 0 0 chr18 31750570 31750637 -54926911 + AT_rich Low_complexity Low_complexity 1 67 0 233 266 86 22 chr18 31750642 31750781 -54926767 + L1M4 LINE L1 5219 5366 -780 1809 144 64 34 chr18 31750787 31751209 -54926339 + MER51B LTR ERV1 1 377 0 198 71 0 0 chr18 31752077 31752105 -54925443 + (TAA)n Simple_repeat Simple_repeat 2 29 0 438 323 25 19 chr18 31752893 31753054 -54924494 - MIR SINE MIR -36 226 65 221 316 111 34 chr18 31754541 31754658 -54922890 + MIR SINE MIR 110 235 -27 461 293 116 34 chr18 31754980 31755393 -54922155 + L1ME LINE L1 4942 5388 -758 279 314 41 26 chr18 31755628 31755822 -54921726 + L1ME LINE L1 5629 5825 -296 * 848 197 70 14 chr18 31755816 31755854 -54921694 + L1MA3 LINE L1 6080 6114 -191 1583 189 3 14 chr18 31755854 31756168 -54921380 - AluJo SINE Alu 0 311 1 848 197 70 14 chr18 31756168 31756341 -54921207 + L1MA3 LINE L1 6114 6304 -1 2573 215 11 4 chr18 31756875 31757397 -54920151 - MER44D DNA MER2_type -1 604 24 551 330 34 0 chr18 31757497 31757676 -54919872 - MER5A DNA MER1_type -1 188 4 239 271 34 0 chr18 31758256 31758315 -54919233 - LTR67 LTR ERVL 0 557 497 407 258 46 53 chr18 31759139 31759290 -54918258 - MLT1L LTR MaLR 0 615 466 264 309 127 18 chr18 31759440 31759605 -54917943 - MLT1L LTR MaLR -418 197 15 432 293 66 6 chr18 31759829 31759996 -54917552 - MIR SINE MIR -12 250 74 2324 85 0 3 chr18 31760046 31760351 -54917197 - AluSq SINE Alu -7 306 3 23 0 0 0 chr18 31760529 31760552 -54916996 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr18 31761048 31761072 -54916476 + AT_rich Low_complexity Low_complexity 1 24 0 333 0 0 0 chr18 31762046 31762083 -54915465 + (TG)n Simple_repeat Simple_repeat 2 38 0 187 54 54 0 chr18 31762082 31762119 -54915429 + T-rich Low_complexity Low_complexity 5 43 0 * 1475 59 0 0 chr18 31762119 31762306 -54915242 - L1PA5 LINE L1 -18 6136 5950 742 43 0 0 chr18 31762306 31762398 -54915150 + L1PA5 LINE L1 5857 5948 -206 347 291 68 34 chr18 31762695 31762901 -54914647 - L1MEd LINE L1 -3757 2372 2160 313 355 114 0 chr18 31763453 31763619 -54913929 - HAL1 LINE L1 -864 1643 1459 1260 157 59 0 chr18 31763801 31763946 -54913602 - L1MA9 LINE L1 0 6312 6146 297 0 0 0 chr18 31763946 31763979 -54913569 + (TG)n Simple_repeat Simple_repeat 2 34 0 1260 157 59 0 chr18 31763979 31764069 -54913479 - L1MA9 LINE L1 -166 6146 6063 815 331 72 25 chr18 31764070 31764669 -54912879 - L1MEd LINE L1 -5055 1064 438 507 33 0 0 chr18 31765930 31765991 -54911557 + (GAAAA)n Simple_repeat Simple_repeat 3 63 0 985 259 40 29 chr18 31765991 31766338 -54911210 + HsTC2 DNA Tc2 1189 1715 -183 25 90 0 0 chr18 31766338 31766405 -54911143 + AT_rich Low_complexity Low_complexity 1 67 0 48 53 0 0 chr18 31766562 31766638 -54910910 + AT_rich Low_complexity Low_complexity 1 76 0 703 342 58 27 chr18 31766784 31767298 -54910250 - HAL1 LINE L1 -595 1912 1383 3298 182 18 2 chr18 31767363 31767963 -54909585 - Tigger1 DNA MER2_type -2 2416 1807 1407 206 7 14 chr18 31767989 31768275 -54909273 - Tigger1 DNA MER2_type -848 1570 1287 * 5077 168 13 3 chr18 31768245 31769104 -54908444 - Tigger1 DNA MER2_type -1551 867 1 3946 98 1 58 chr18 31769630 31770280 -54907268 - L1PB1 LINE L1 -2 6149 5537 1500 217 14 31 chr18 31770281 31770337 -54907211 + L1P LINE L1 3284 3339 -2807 2128 84 3 53 chr18 31770337 31770658 -54906890 + AluY SINE Alu 3 307 -4 1500 217 14 31 chr18 31770658 31771020 -54906528 + L1P LINE L1 3339 3695 -2451 303 317 32 16 chr18 31771024 31771147 -54906401 - HAL1 LINE L1 -1810 697 573 320 370 57 35 chr18 31771179 31771406 -54906142 - HAL1 LINE L1 -2040 467 236 3009 322 107 22 chr18 31771475 31773398 -54904150 - L2 LINE L2 -1 3312 1221 423 263 72 57 chr18 31774175 31774369 -54903179 + L2 LINE L2 3117 3313 0 242 316 13 13 chr18 31774441 31774520 -54903028 + L3 LINE CR1 1488 1566 -11 201 307 70 9 chr18 31774524 31774638 -54902910 + MIR3 SINE MIR 84 204 -4 749 280 78 38 chr18 31775660 31776005 -54901543 - MLT1J LTR MaLR -148 326 1 1999 117 14 0 chr18 31776797 31777087 -54900461 + AluSg SINE Alu 1 294 -16 498 312 133 21 chr18 31777700 31777979 -54899569 + L1MC4 LINE L1 6703 7012 -1030 267 31 0 0 chr18 31778131 31778163 -54899385 + (CA)n Simple_repeat Simple_repeat 2 33 0 805 135 0 0 chr18 31778163 31778274 -54899274 - FLAM_C SINE Alu -21 122 12 463 276 113 29 chr18 31778430 31778741 -54898807 + L1MC4 LINE L1 7094 7430 -612 377 263 69 53 chr18 31778909 31779156 -54898392 + L1MC5 LINE L1 7469 7719 -242 434 339 112 18 chr18 31779689 31780125 -54897423 + L1M4 LINE L1 4518 4994 -1152 24 0 0 0 chr18 31780200 31780224 -54897324 + AT_rich Low_complexity Low_complexity 1 24 0 216 200 0 0 chr18 31780302 31780347 -54897201 + (TA)n Simple_repeat Simple_repeat 1 45 0 657 229 0 0 chr18 31780453 31780575 -54896973 - FLAM_C SINE Alu -16 127 6 22 56 0 0 chr18 31781291 31781327 -54896221 + AT_rich Low_complexity Low_complexity 1 36 0 210 174 0 22 chr18 31781343 31781389 -54896159 + (TGAA)n Simple_repeat Simple_repeat 2 46 0 1823 162 0 10 chr18 31781941 31782238 -54895310 + AluSx SINE Alu 1 294 -18 775 274 71 40 chr18 31782910 31783264 -54894284 - LTR16A LTR ERVL 0 450 86 26 50 0 0 chr18 31783374 31783414 -54894134 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr18 31783779 31783802 -54893746 + AT_rich Low_complexity Low_complexity 1 23 0 2363 75 10 0 chr18 31783963 31784269 -54893279 - AluY SINE Alu -2 309 1 1980 283 39 4 chr18 31784947 31785508 -54892040 + MLT1G LTR MaLR 8 588 -2 1972 96 14 45 chr18 31786076 31786368 -54891180 + AluSc SINE Alu 27 309 0 186 43 0 0 chr18 31788029 31788052 -54889496 + (CA)n Simple_repeat Simple_repeat 2 24 0 207 361 56 47 chr18 31788209 31788550 -54888998 - L2 LINE L2 -47 3266 2923 261 261 0 33 chr18 31789273 31789365 -54888183 + CT-rich Low_complexity Low_complexity 2 90 0 229 350 21 0 chr18 31789762 31789859 -54887689 - L2 LINE L2 -2903 411 313 360 274 50 81 chr18 31790412 31790671 -54886877 - L1MC4a LINE L1 -1822 5986 5736 275 271 75 45 chr18 31790672 31790805 -54886743 - L2 LINE L2 0 3313 3177 340 346 179 0 chr18 31790848 31791027 -54886521 - L2 LINE L2 -394 2920 2710 418 349 42 9 chr18 31791027 31791239 -54886309 - L1MC4a LINE L1 -2078 5730 5512 675 197 0 0 chr18 31791330 31791447 -54886101 - FLAM_C SINE Alu -15 118 2 241 365 44 39 chr18 31791954 31792157 -54885391 - L2 LINE L2 -2107 1207 1004 1883 186 41 23 chr18 31792289 31792724 -54884824 - L1MA8 LINE L1 -12 6279 5837 302 159 14 0 chr18 31793489 31793558 -54883990 + CT-rich Low_complexity Low_complexity 1 70 0 248 252 135 9 chr18 31793995 31794106 -54883442 - L2 LINE L2 -9 3263 3139 2004 99 7 0 chr18 31794600 31794884 -54882664 - L1P4 LINE L1 -558 5607 5322 1455 117 0 0 chr18 31794884 31795080 -54882468 - AluSg/x SINE Alu -17 293 98 456 167 31 0 chr18 31795184 31795280 -54882268 - L1PBa LINE L1 -6671 192 94 2318 100 47 33 chr18 31795280 31795639 -54881909 + THE1B LTR MaLR 1 364 0 983 64 28 0 chr18 31795639 31795780 -54881768 + THE1B-int LTR MaLR 1 145 -1435 29 47 0 0 chr18 31795937 31795980 -54881568 + AT_rich Low_complexity Low_complexity 1 43 0 760 295 70 4 chr18 31796213 31796716 -54880832 + MER69 DNA AcHobo 134 766 -460 1369 204 3 78 chr18 31796816 31797150 -54880398 + L1MD2 LINE L1 6031 6339 -20 220 369 39 0 chr18 31797188 31797291 -54880257 - L2 LINE L2 -656 2658 2552 303 67 0 0 chr18 31797718 31797763 -54879785 - MADE1 DNA Mariner -35 45 1 1428 252 23 2 chr18 31797770 31798210 -54879338 - L1 LINE L1 -2494 3652 3204 221 57 29 0 chr18 31799013 31799048 -54878500 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 393 22 0 0 chr18 31799182 31799228 -54878320 + (CTAAT)n Simple_repeat Simple_repeat 4 49 0 1585 200 17 10 chr18 31799908 31800203 -54877345 + L1PBa LINE L1 20 316 -6547 3220 142 34 4 chr18 31800307 31800843 -54876705 + L1PBa LINE L1 906 1457 -5406 182 190 0 17 chr18 31801515 31801573 -54875975 + GA-rich Low_complexity Low_complexity 4 60 0 2389 85 0 0 chr18 31802006 31802301 -54875247 - AluSg SINE Alu -15 295 1 2085 103 3 10 chr18 31802495 31802785 -54874763 + AluSq SINE Alu 1 288 -25 24 0 0 0 chr18 31802902 31802926 -54874622 + AT_rich Low_complexity Low_complexity 1 24 0 383 43 57 0 chr18 31806199 31806269 -54871279 + (TAGA)n Simple_repeat Simple_repeat 3 76 0 2403 104 0 19 chr18 31806270 31806635 -54870913 + L1PB1 LINE L1 5794 6151 0 1512 256 69 34 chr18 31806639 31807259 -54870289 + L1MDa LINE L1 75 716 -5824 491 118 0 0 chr18 31807364 31807432 -54870116 + Alu SINE Alu 182 249 -62 1235 101 14 46 chr18 31807432 31807650 -54869898 + AluSg/x SINE Alu 85 295 -17 769 258 114 54 chr18 31807941 31808507 -54869041 - MLT1F1 LTR MaLR -2 593 14 2348 94 0 16 chr18 31808855 31809162 -54868386 - AluSg SINE Alu -7 303 2 1952 130 4 0 chr18 31809873 31810149 -54867399 - AluSx SINE Alu -35 277 1 2899 91 7 17 chr18 31810391 31810808 -54866740 - L1PBa LINE L1 -5814 1049 637 1141 141 22 0 chr18 31810809 31810993 -54866555 - L1PBa LINE L1 -6675 188 1 496 163 130 24 chr18 31811058 31811181 -54866367 + MLT1A1 LTR MaLR 1 136 -229 833 334 62 29 chr18 31811296 31811781 -54865767 - L1M2a LINE L1 -5190 1021 521 450 341 26 49 chr18 31811931 31812198 -54865350 - L1M2a LINE L1 -5710 431 171 3012 264 24 14 chr18 31812299 31813311 -54864237 + L1 LINE L1 2172 3193 -2953 795 111 0 8 chr18 31813331 31813457 -54864091 - L1MA2 LINE L1 0 6304 6180 2382 85 3 0 chr18 31814044 31814338 -54863210 - AluSg SINE Alu -14 296 2 22 0 0 0 chr18 31814664 31814686 -54862862 + AT_rich Low_complexity Low_complexity 1 22 0 1356 104 0 0 chr18 31814816 31814999 -54862549 + AluY SINE Alu 127 309 -2 2259 103 0 0 chr18 31815001 31815313 -54862235 + THE1B-int LTR MaLR 1269 1580 0 1794 157 53 36 chr18 31815315 31815671 -54861877 + THE1B LTR MaLR 3 364 0 630 96 32 0 chr18 31815671 31815765 -54861783 - L1PBa LINE L1 -6765 98 2 2155 109 3 0 chr18 31816460 31816782 -54860766 + AluSg SINE Alu 1 323 0 207 309 106 38 chr18 31817190 31817510 -54860038 - L2 LINE L2 -349 2965 2624 370 309 24 0 chr18 31817526 31817649 -54859899 - MIR SINE MIR -7 255 130 1589 245 105 9 chr18 31817795 31818101 -54859447 + MLT1F LTR MaLR 1 361 -181 2255 115 3 3 chr18 31818101 31818414 -54859134 + AluSq SINE Alu 1 313 0 1589 245 105 9 chr18 31818414 31818536 -54859012 + MLT1F LTR MaLR 361 470 -72 429 284 57 21 chr18 31818644 31818785 -54858763 + L2 LINE L2 3168 3313 0 303 309 24 0 chr18 31818788 31818872 -54858676 - MIR SINE MIR -157 105 20 1664 130 4 0 chr18 31818985 31819232 -54858316 + AluSp SINE Alu 1 248 -65 2209 107 57 28 chr18 31819347 31819701 -54857847 - THE1B LTR MaLR 0 364 1 7303 112 14 1 chr18 31819701 31820719 -54856829 - THE1B-int LTR MaLR 0 1580 550 938 208 0 0 chr18 31820869 31821028 -54856520 - FRAM SINE Alu -7 159 1 6178 90 12 3 chr18 31821973 31823198 -54854350 + L1PB1 LINE L1 4916 6149 -2 1336 214 24 12 chr18 31823270 31823606 -54853942 + L1 LINE L1 3178 3517 -2629 182 121 0 30 chr18 31823811 31823844 -54853704 - L2 LINE L2 -968 2346 2315 1115 142 3 0 chr18 31824222 31824487 -54853061 + AluSg1 SINE Alu 1 185 -124 2352 76 0 7 chr18 31824489 31824793 -54852755 + AluY SINE Alu 3 304 -7 24 32 0 0 chr18 31825733 31825764 -54851784 + AT_rich Low_complexity Low_complexity 1 31 0 342 279 116 32 chr18 31826382 31826572 -54850976 + L1M4 LINE L1 2938 3143 -3003 300 360 40 24 chr18 31826809 31826934 -54850614 - L2 LINE L2 0 3272 3146 21 57 0 0 chr18 31827280 31827315 -54850233 + AT_rich Low_complexity Low_complexity 1 35 0 2355 131 11 11 chr18 31827328 31827703 -54849845 + THE1C LTR MaLR 1 375 0 9907 115 35 41 chr18 31827703 31829293 -54848255 + THE1C-int LTR MaLR 1 1580 0 1459 131 20 12 chr18 31829293 31829537 -54848011 + THE1C LTR MaLR 1 246 -129 343 140 0 0 chr18 31829541 31829591 -54847957 + THE1C LTR MaLR 379 428 0 447 337 94 42 chr18 31830134 31830615 -54846933 - L1M4 LINE L1 -3531 2615 2110 4526 155 46 6 chr18 31830636 31831468 -54846080 - L1MC1 LINE L1 -18 6595 5731 21557 177 25 32 chr18 31831489 31833082 -54844466 - L1PA11 LINE L1 0 7612 6010 1963 146 0 3 chr18 31833082 31833370 -54844178 - AluSx SINE Alu -25 287 1 21557 177 25 32 chr18 31833370 31834783 -54842765 - L1PA11 LINE L1 -1602 6010 4589 479 115 26 0 chr18 31834783 31834861 -54842687 + MADE1 DNA Mariner 1 80 0 21557 177 25 32 chr18 31834861 31837687 -54839861 - L1PA11 LINE L1 -3023 4589 1000 1250 183 70 69 chr18 31837712 31838184 -54839364 + MER51A LTR ERV1 1 634 0 2424 261 57 29 chr18 31838188 31838871 -54838677 - L1PA11 LINE L1 -6879 702 1 * 9054 250 31 13 chr18 31838870 31842000 -54835548 - L1MC1 LINE L1 -744 5682 2538 307 307 150 20 chr18 31842498 31842651 -54834897 + MIR SINE MIR 32 204 -58 537 202 21 31 chr18 31842731 31842941 -54834607 - L1MC1 LINE L1 -3890 2536 2337 22 0 0 30 chr18 31842942 31842956 -54834592 + AT_rich Low_complexity Low_complexity 1 14 -18 1725 204 0 0 chr18 31842956 31843264 -54834284 - AluJo SINE Alu -4 308 1 22 0 0 30 chr18 31843264 31843282 -54834266 + AT_rich Low_complexity Low_complexity 14 32 0 269 299 54 43 chr18 31843337 31843521 -54834027 - L1MC1 LINE L1 -6063 544 359 342 0 0 0 chr18 31843529 31843567 -54833981 + (TG)n Simple_repeat Simple_repeat 1 38 0 453 287 83 73 chr18 31843633 31843947 -54833601 - L1MDa LINE L1 -5178 902 586 580 324 79 40 chr18 31844180 31844674 -54832874 - L1MDa LINE L1 -5552 518 6 630 156 0 0 chr18 31844820 31844916 -54832632 - Tigger7 DNA MER2_type 0 2587 2492 2902 168 13 29 chr18 31844916 31845441 -54832107 - Tigger7 DNA MER2_type -1970 517 1 27 0 0 0 chr18 31845454 31845481 -54832067 + AT_rich Low_complexity Low_complexity 1 27 0 350 305 61 20 chr18 31845584 31845781 -54831767 - HAL1 LINE L1 -850 1657 1453 340 300 85 58 chr18 31845921 31846214 -54831334 - L1MEd LINE L1 -5008 1111 811 201 299 104 0 chr18 31847440 31847517 -54830031 + MIR SINE MIR 120 204 -58 1494 52 0 0 chr18 31848406 31848579 -54828969 - AluY SINE Alu -110 201 29 227 403 25 0 chr18 31848828 31848947 -54828601 - L2 LINE L2 -5 3267 3146 34 24 0 0 chr18 31849135 31849176 -54828372 + AT_rich Low_complexity Low_complexity 1 41 0 226 329 0 0 chr18 31849234 31849307 -54828241 - MIR SINE MIR -112 150 78 373 299 39 24 chr18 31849311 31849438 -54828110 + L2 LINE L2 3184 3312 -1 564 74 41 8 chr18 31849505 31849627 -54827921 + (TA)n Simple_repeat Simple_repeat 1 126 0 274 313 56 44 chr18 31849634 31849794 -54827754 - MIR SINE MIR -26 236 75 218 283 0 0 chr18 31850562 31850608 -54826940 + (TATG)n Simple_repeat Simple_repeat 4 49 0 3076 165 20 42 chr18 31852069 31852710 -54824838 - L1MC3 LINE L1 0 7785 7159 3246 199 121 17 chr18 31852711 31853478 -54824070 + MER21B LTR ERV1 3 849 -14 230 258 16 16 chr18 31853493 31853555 -54823993 - MLT1F1 LTR MaLR -464 103 42 1913 194 48 71 chr18 31853567 31854104 -54823444 - L1MC3 LINE L1 -705 7080 6556 298 288 59 82 chr18 31854506 31854676 -54822872 - MER5B DNA MER1_type -2 176 11 2792 157 160 3 chr18 31855419 31855999 -54821549 - LTR51 LTR ERV1 0 671 1 370 135 0 0 chr18 31856018 31856070 -54821478 - MER1A DNA MER1_type -5 534 483 2236 163 23 3 chr18 31856077 31856427 -54821121 - MER1A DNA MER1_type -170 359 3 3615 191 20 7 chr18 31856983 31857679 -54819869 + MER44D DNA MER2_type 1 705 0 209 319 70 75 chr18 31859786 31860027 -54817521 + L2 LINE L2 2999 3238 -75 466 203 32 142 chr18 31860569 31861187 -54816361 - TAR1 Satellite telomeric -1801 310 34 1676 169 17 60 chr18 31860713 31860824 -54816724 - LTR60 LTR ERV1 0 586 472 2456 94 0 0 chr18 31860824 31861132 -54816416 - AluSg SINE Alu -2 308 1 1676 169 17 60 chr18 31861132 31861369 -54816179 - LTR60 LTR ERV1 -114 472 253 619 139 10 0 chr18 31861378 31861479 -54816069 - LTR60 LTR ERV1 -484 102 1 1017 296 88 25 chr18 31862203 31862724 -54814824 + L2 LINE L2 1104 1657 -1657 2170 194 217 71 chr18 31862748 31863594 -54813954 + LTR28 LTR ERV1 1 822 -4 1480 266 84 50 chr18 31863599 31864389 -54813159 + LTR28-int LTR ERV1 6 626 -2462 36509 152 12 11 chr18 31864400 31870758 -54806790 + LTR28-int LTR ERV1 279 7090 -1 2579 205 179 72 chr18 31870759 31871013 -54806535 + LTR28 LTR ERV1 1 226 -794 459 0 0 0 chr18 31871013 31871064 -54806484 + (GA)n Simple_repeat Simple_repeat 2 52 0 2579 205 179 72 chr18 31871064 31871730 -54805818 + LTR28 LTR ERV1 226 1020 0 1957 178 22 8 chr18 31871776 31872136 -54805412 - MLT1A1 LTR MaLR 0 365 1 585 191 149 54 chr18 31872160 31872328 -54805220 + MER82 DNA MER2_type 24 207 -446 1837 254 18 26 chr18 31872835 31873291 -54804257 + MER82 DNA MER2_type 201 652 -1 267 203 0 0 chr18 31873293 31873352 -54804196 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 511 294 27 33 chr18 31873542 31873726 -54803822 + L2 LINE L2 1871 2053 -1261 359 278 286 4 chr18 31873729 31873988 -54803560 + Charlie2 DNA MER1_type 1 332 -2530 279 250 9 69 chr18 31873976 31874092 -54803456 + Charlie2 DNA MER1_type 1855 1963 -899 * 345 24 0 0 chr18 31874187 31874229 -54803319 + (CA)n Simple_repeat Simple_repeat 2 43 0 622 306 82 46 chr18 31874428 31874794 -54802754 + L2 LINE L2 2935 3313 0 1564 242 110 34 chr18 31874814 31875314 -54802234 - MER92C LTR ERV1 -16 538 1 231 167 0 0 chr18 31876291 31876333 -54801215 + A-rich Low_complexity Low_complexity 1 42 0 2145 158 33 0 chr18 31876567 31876928 -54800620 - Tigger1 DNA MER2_type -5 2413 2041 625 180 16 0 chr18 31876971 31877093 -54800455 - Tigger1 DNA MER2_type -1465 953 830 571 141 10 20 chr18 31877093 31877192 -54800356 + MER4A LTR ERV1 1 98 -566 1804 151 20 16 chr18 31877192 31877536 -54800012 + MER4A LTR ERV1 261 664 0 * 4812 153 40 0 chr18 31877536 31878336 -54799212 - Tigger1 DNA MER2_type -1585 833 2 35 24 0 0 chr18 31878673 31878715 -54798833 + AT_rich Low_complexity Low_complexity 1 42 0 24 96 0 0 chr18 31878776 31878849 -54798699 + AT_rich Low_complexity Low_complexity 1 73 0 2502 238 29 50 chr18 31880069 31880855 -54796693 - L1ME1 LINE L1 -5 6230 5461 1258 196 113 15 chr18 31880858 31881195 -54796353 + MER90 LTR ERV1 211 580 -34 1183 272 41 22 chr18 31881210 31881577 -54795971 - L1ME1 LINE L1 -1238 4977 4618 1842 130 28 11 chr18 31881577 31881862 -54795686 + AluSx SINE Alu 1 290 -22 2064 111 0 10 chr18 31881862 31882160 -54795388 + AluSx SINE Alu 1 295 -17 1183 272 41 22 chr18 31882160 31882283 -54795265 - L1ME1 LINE L1 -1596 4619 4477 470 225 97 71 chr18 31882315 31882743 -54794805 - L1ME1 LINE L1 -1712 4503 3179 338 218 40 0 chr18 31882750 31882851 -54794697 - L1ME1 LINE L1 -3135 3080 2976 339 269 0 0 chr18 31883213 31883291 -54794257 - HERVL40 LTR ERVL -4165 1365 1288 651 26 0 0 chr18 31883359 31883436 -54794112 + (GA)n Simple_repeat Simple_repeat 2 78 0 444 262 119 6 chr18 31883447 31883615 -54793933 - HERVL40 LTR ERVL -4386 1144 958 1942 116 38 9 chr18 31883631 31884003 -54793545 - LTR7 LTR ERV1 0 450 18 903 297 110 24 chr18 31884302 31884719 -54792829 - LTR40c LTR ERVL -12 453 1 502 279 52 26 chr18 31884725 31885030 -54792518 - L1ME1 LINE L1 -5411 985 673 589 298 78 54 chr18 31885057 31885480 -54792068 - L1ME1 LINE L1 -5887 509 77 354 324 91 6 chr18 31887900 31888076 -54789472 + MIR SINE MIR 72 262 0 520 221 92 56 chr18 31888672 31888921 -54788627 - MER20B DNA MER1_type -3 780 523 328 294 132 15 chr18 31889514 31889650 -54787898 - MLT1J LTR MaLR -314 197 46 584 250 95 0 chr18 31890989 31891137 -54786411 + FRAM SINE Alu 1 159 -17 959 321 67 29 chr18 31891189 31891634 -54785914 - LTR16B LTR ERVL -2 462 1 6840 69 5 0 chr18 31891863 31893097 -54784451 + L1PA7 LINE L1 4942 6154 0 419 286 80 3 chr18 31893139 31893308 -54784240 - MIR SINE MIR -37 171 32 3595 174 34 58 chr18 31893668 31894541 -54783007 + L1MA9 LINE L1 5422 6273 -39 210 135 0 0 chr18 31894939 31894947 -54782601 + (A)n Simple_repeat Simple_repeat 1 8 -29 195 42 0 0 chr18 31894947 31894971 -54782577 + (GGGGA)n Simple_repeat Simple_repeat 5 28 0 210 135 0 0 chr18 31894971 31894999 -54782549 + (A)n Simple_repeat Simple_repeat 7 37 0 317 301 113 74 chr18 31895739 31895968 -54781580 + MIR SINE MIR 10 247 -15 379 372 55 5 chr18 31896138 31896337 -54781211 - MLT1J1 LTR MaLR -138 308 100 270 341 43 29 chr18 31896602 31896740 -54780808 + MER5A DNA MER1_type 50 189 0 1657 143 0 19 chr18 31897116 31897375 -54780173 - AluSx SINE Alu -30 282 29 637 131 42 18 chr18 31898784 31898952 -54778596 + GA-rich Low_complexity Low_complexity 1 172 0 246 318 99 51 chr18 31900425 31900716 -54776832 - MLT1J LTR MaLR -2 509 195 1761 147 142 39 chr18 31900716 31901104 -54776444 - MSTA LTR MaLR 0 428 1 246 318 99 51 chr18 31901104 31901186 -54776362 - MLT1J LTR MaLR -316 195 118 1513 147 0 96 chr18 31901625 31901938 -54775610 + AluJo SINE Alu 5 287 -25 2537 57 0 0 chr18 31902231 31902531 -54775017 - AluY SINE Alu -11 300 1 200 146 0 21 chr18 31902749 31902797 -54774751 + (TG)n Simple_repeat Simple_repeat 2 48 0 1687 182 4 0 chr18 31903444 31903765 -54773783 + AluJb SINE Alu 2 323 0 291 254 0 0 chr18 31905034 31905101 -54772447 + (TG)n Simple_repeat Simple_repeat 2 68 0 2958 320 107 33 chr18 31905591 31907305 -54770243 + L2 LINE L2 1172 3006 -307 426 251 62 39 chr18 31907454 31907633 -54769915 + L1PA10 LINE L1 5643 5825 -343 * 2153 175 40 50 chr18 31907489 31907987 -54769561 + L1MB3 LINE L1 5688 6180 -3 3522 215 64 6 chr18 31908006 31908908 -54768640 - L1MB1 LINE L1 -1372 4774 3820 * 4300 202 16 9 chr18 31908907 31909534 -54768014 + L1MB1 LINE L1 4790 5411 -757 2301 159 24 7 chr18 31909534 31909954 -54767594 + MSTA LTR MaLR 1 427 -1 4300 202 16 9 chr18 31909954 31910695 -54766853 + L1MB1 LINE L1 5411 6168 0 294 333 45 73 chr18 31912106 31912352 -54765196 - L2 LINE L2 -219 3053 2815 242 289 79 9 chr18 31912585 31912699 -54764849 - L2 LINE L2 -919 2395 2274 418 266 16 69 chr18 31912887 31913075 -54764473 - MER74A LTR ERVL -6 552 375 247 191 0 0 chr18 31913361 31913408 -54764140 - L2 LINE L2 -21 3251 3205 204 40 0 0 chr18 31914486 31914511 -54763037 + (CA)n Simple_repeat Simple_repeat 2 26 0 234 0 0 0 chr18 31914562 31914588 -54762960 + (TG)n Simple_repeat Simple_repeat 1 26 0 2068 162 53 12 chr18 31916278 31916691 -54760857 + MSTB1 LTR MaLR 3 432 0 264 253 52 25 chr18 31917314 31917470 -54760078 - L1M1 LINE L1 -327 5835 5683 185 191 0 21 chr18 31917470 31917517 -54760031 + (TATG)n Simple_repeat Simple_repeat 2 47 0 613 288 95 57 chr18 31918426 31919293 -54758255 - L1MDa LINE L1 -1447 5093 4194 2068 119 0 0 chr18 31920312 31920598 -54756950 + AluSx SINE Alu 1 286 -26 25 0 0 0 chr18 31921075 31921100 -54756448 + AT_rich Low_complexity Low_complexity 1 25 0 453 342 84 40 chr18 31921970 31922517 -54755031 - L1MDa LINE L1 -3304 3236 2666 254 248 38 15 chr18 31922562 31922695 -54754853 - L1MDa LINE L1 -3961 2579 2444 21 0 0 0 chr18 31924562 31924583 -54752965 + AT_rich Low_complexity Low_complexity 1 21 0 192 263 0 0 chr18 31925248 31925286 -54752262 - MIR SINE MIR -150 112 75 887 312 46 3 chr18 31925343 31925625 -54751923 - LTR16A LTR ERVL 0 450 157 1311 349 71 33 chr18 31925985 31927213 -54750335 - HERVL LTR ERVL -539 5115 3835 2305 104 0 0 chr18 31927505 31927814 -54749734 - AluSx SINE Alu -1 311 3 950 328 40 26 chr18 31927948 31928378 -54749170 - LTR16A LTR ERVL -14 436 1 2940 264 124 61 chr18 31929504 31931452 -54746096 + L1ME1 LINE L1 34 2104 -4292 2740 282 65 9 chr18 31931463 31932625 -54744923 + L1ME1 LINE L1 3175 4401 -1814 2254 229 92 51 chr18 31932637 31932929 -54744619 + L1ME1 LINE L1 4566 4845 -1390 288 0 0 0 chr18 31932929 31932961 -54744587 + (CA)n Simple_repeat Simple_repeat 2 33 0 2254 229 92 51 chr18 31932961 31934258 -54743290 + L1ME1 LINE L1 4845 6229 -6 21 57 0 0 chr18 31934443 31934478 -54743070 + AT_rich Low_complexity Low_complexity 1 35 0 204 231 0 0 chr18 31935209 31935261 -54742287 + (TTA)n Simple_repeat Simple_repeat 3 54 0 198 103 0 0 chr18 31935334 31935363 -54742185 + (GAA)n Simple_repeat Simple_repeat 1 29 0 606 200 36 72 chr18 31935503 31935601 -54741947 + MER53 DNA DNA 1 90 -99 1657 158 72 36 chr18 31935601 31935963 -54741585 + THE1C LTR MaLR 1 375 0 606 200 36 72 chr18 31935963 31936059 -54741489 + MER53 DNA DNA 90 188 -1 508 256 39 0 chr18 31936884 31937013 -54740535 + MER94 DNA DNA 1 134 0 218 160 0 40 chr18 31937031 31937081 -54740467 + (TTTG)n Simple_repeat Simple_repeat 2 49 0 1616 189 4 7 chr18 31937083 31937364 -54740184 - AluJo SINE Alu -30 282 3 228 289 202 0 chr18 31937845 31937959 -54739589 - MIR SINE MIR -70 192 56 495 255 63 7 chr18 31937971 31938170 -54739378 + L1ME3A LINE L1 5708 5914 -248 229 158 0 0 chr18 31938352 31938390 -54739158 + L1ME3A LINE L1 6026 6063 -107 552 77 0 0 chr18 31938413 31938491 -54739057 - Alu SINE Alu -2 310 233 550 291 70 44 chr18 31938649 31938749 -54738799 + L1M4 LINE L1 3414 3510 -2636 1875 111 25 11 chr18 31938749 31939144 -54738404 - AluSx SINE Alu 0 399 1 550 291 70 44 chr18 31939144 31939609 -54737939 + L1M4 LINE L1 3510 3995 -2151 316 290 94 53 chr18 31939773 31940018 -54737530 + L1M4 LINE L1 4138 4392 -1754 1470 261 15 91 chr18 31940026 31940822 -54736726 + L1M4 LINE L1 4301 5036 -1110 289 93 0 5 chr18 31940867 31940916 -54736632 - MLT2D LTR ERVL 0 515 478 228 67 0 0 chr18 31940925 31940955 -54736593 + (CA)n Simple_repeat Simple_repeat 1 30 0 242 132 19 0 chr18 31940959 31941012 -54736536 + GA-rich Low_complexity Low_complexity 1 54 0 1918 139 21 77 chr18 31941013 31941197 -54736351 - MLT2D LTR ERVL -48 366 214 2347 91 0 0 chr18 31941197 31941506 -54736042 - AluSc SINE Alu 0 309 1 1918 139 21 77 chr18 31941506 31941709 -54735839 - MLT2D LTR ERVL -200 214 1 1164 203 126 31 chr18 31941712 31942062 -54735486 - LTR52 LTR ERVL -38 383 1 196 176 29 0 chr18 31944052 31944120 -54733428 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 943 219 111 51 chr18 31944123 31944438 -54733110 - MLT2C1 LTR ERVL -59 338 5 282 302 71 8 chr18 31945228 31945354 -54732194 + MIR SINE MIR 21 154 -108 361 339 0 8 chr18 31945362 31945483 -54732065 - L2 LINE L2 -2 3311 3192 328 296 61 0 chr18 31945480 31945578 -54731970 + MIR SINE MIR 159 262 0 * 22 80 0 0 chr18 31945744 31945794 -54731754 + AT_rich Low_complexity Low_complexity 1 50 0 345 85 0 0 chr18 31945980 31946027 -54731521 + Alu SINE Alu 1 47 -253 4009 149 40 88 chr18 31946027 31946229 -54731319 + L1PB4 LINE L1 5170 5380 -776 1340 80 10 40 chr18 31946229 31946420 -54731128 + L1PA10 LINE L1 5966 6159 -9 4009 149 40 88 chr18 31946420 31947245 -54730303 + L1PB4 LINE L1 5380 6151 -5 263 339 121 0 chr18 31947262 31947386 -54730162 + MIR SINE MIR 119 257 -5 556 283 75 64 chr18 31949026 31949387 -54728161 + HAL1 LINE L1 52 416 -2091 187 362 0 0 chr18 31949620 31949678 -54727870 - L2 LINE L2 -21 3292 3235 216 189 0 19 chr18 31949678 31949731 -54727817 + (TCTCTG)n Simple_repeat Simple_repeat 6 57 0 240 35 0 0 chr18 31949773 31949802 -54727746 + (CA)n Simple_repeat Simple_repeat 2 30 0 228 35 0 0 chr18 31949844 31949873 -54727675 + (TG)n Simple_repeat Simple_repeat 2 30 0 539 206 0 0 chr18 31949874 31949981 -54727567 + FLAM_C SINE Alu 1 107 -36 3410 196 36 24 chr18 31949988 31950825 -54726723 - L1 LINE L1 -1140 5006 4160 981 256 84 74 chr18 31950827 31951411 -54726137 - L2 LINE L2 -171 3142 2559 504 320 86 53 chr18 31951553 31952065 -54725483 - LTR67 LTR ERVL -2 555 27 1112 72 0 0 chr18 31952176 31952314 -54725234 + AluY SINE Alu 1 138 -173 1877 82 0 4 chr18 31952314 31952559 -54724989 + AluSg/x SINE Alu 69 312 0 321 68 0 0 chr18 31952992 31953036 -54724512 + (TG)n Simple_repeat Simple_repeat 1 44 0 364 323 10 0 chr18 31953041 31953140 -54724408 - MER58 DNA MER1_type -114 101 2 1338 210 74 27 chr18 31953393 31953731 -54723817 + MLT1A1 LTR MaLR 10 363 -2 768 296 28 31 chr18 31953769 31953930 -54723618 - ERVL LTR ERVL -3302 2462 2301 1822 187 33 0 chr18 31953930 31954267 -54723281 - MER7A DNA MER2_type 0 346 1 768 296 28 31 chr18 31954267 31954392 -54723156 - ERVL LTR ERVL -3463 2301 2177 575 273 32 43 chr18 31955857 31956110 -54721438 + HAL1 LINE L1 2225 2474 -33 2113 118 0 3 chr18 31956120 31956416 -54721132 + AluSc SINE Alu 1 295 -14 420 67 0 0 chr18 31956452 31956512 -54721036 + (TA)n Simple_repeat Simple_repeat 2 61 0 1694 164 32 69 chr18 31956522 31956900 -54720648 - MLT1B LTR MaLR -1 389 26 725 209 0 34 chr18 31956905 31957053 -54720495 + FLAM_C SINE Alu 1 143 0 30 83 0 0 chr18 31957081 31957153 -54720395 + AT_rich Low_complexity Low_complexity 1 72 0 199 311 92 53 chr18 31957472 31957547 -54720001 - L2 LINE L2 -2 3311 3240 2159 87 13 7 chr18 31957547 31957846 -54719702 - AluSg SINE Alu -9 301 1 199 311 92 53 chr18 31957846 31957976 -54719572 - L2 LINE L2 -73 3240 3098 290 377 20 1 chr18 31958221 31958387 -54719161 - MIR SINE MIR -51 157 31 224 368 68 16 chr18 31959173 31959423 -54718125 - L2 LINE L2 -1158 2156 1894 296 260 135 31 chr18 31959433 31959529 -54718019 - MER45 DNA AcHobo -1473 108 3 269 282 32 53 chr18 31959963 31960086 -54717462 + MER5B DNA MER1_type 1 121 -68 344 282 58 26 chr18 31960139 31960295 -54717253 + MER5B DNA MER1_type 5 165 -13 2013 214 83 26 chr18 31962286 31962866 -54714682 + LTR48B LTR ERV1 32 644 0 1307 164 0 0 chr18 31962866 31963092 -54714456 + Tigger4(Zombi) DNA MER2_type 2506 2731 0 505 275 92 58 chr18 31963100 31963305 -54714243 + L1MEc LINE L1 1013 1209 -5187 1947 110 4 0 chr18 31963305 31963569 -54713979 + AluSp SINE Alu 39 303 -10 505 275 92 58 chr18 31963569 31964146 -54713402 + L1MEc LINE L1 1209 1822 -4574 22 56 0 0 chr18 31964465 31964501 -54713047 + AT_rich Low_complexity Low_complexity 1 36 0 5475 173 16 7 chr18 31964571 31965660 -54711888 - L1MA6 LINE L1 -10 6290 5192 1914 183 10 24 chr18 31965659 31966070 -54711478 + L1 LINE L1 4170 4574 -1572 * 323 190 0 0 chr18 31966170 31966228 -54711320 - MLT1B LTR MaLR -307 83 26 725 209 0 34 chr18 31966233 31966381 -54711167 + FLAM_C SINE Alu 1 143 0 30 83 0 0 chr18 31966409 31966481 -54711067 + AT_rich Low_complexity Low_complexity 1 72 0 199 311 92 53 chr18 31966800 31966875 -54710673 - L2 LINE L2 -2 3311 3240 2115 87 17 7 chr18 31966875 31967173 -54710375 - AluSg SINE Alu -9 301 1 199 311 92 53 chr18 31967173 31967303 -54710245 - L2 LINE L2 -73 3240 3098 290 377 20 1 chr18 31967549 31967715 -54709833 - MIR SINE MIR -51 157 31 465 201 9 175 chr18 31969056 31969285 -54708263 + L2 LINE L2 3123 3313 0 220 310 28 0 chr18 31970471 31970542 -54707006 + MIR SINE MIR 29 101 -161 677 123 61 0 chr18 31970777 31970891 -54706657 - LTR54B LTR ERV1 -377 121 1 191 303 67 14 chr18 31970964 31971067 -54706481 + MIR SINE MIR 41 149 -59 189 0 0 0 chr18 31971453 31971474 -54706074 + (TC)n Simple_repeat Simple_repeat 2 22 0 22 0 0 0 chr18 31973797 31973819 -54703729 + AT_rich Low_complexity Low_complexity 1 22 0 1148 258 53 18 chr18 31973820 31974341 -54703207 - L1MEc LINE L1 -3682 2533 2039 1512 212 3 3 chr18 31974348 31974640 -54702908 - AluJo SINE Alu -20 292 1 637 285 96 8 chr18 31974801 31975166 -54702382 + L1M4c LINE L1 1023 1419 -4965 643 226 55 63 chr18 31975190 31975563 -54701985 - L1 LINE L1 -1688 4458 4137 390 297 56 62 chr18 31975560 31976058 -54701490 - L1MEc LINE L1 -4171 2225 1731 * 443 341 150 20 chr18 31976273 31976672 -54700876 + L3 LINE CR1 1027 1477 -100 1366 166 14 7 chr18 31976821 31977099 -54700449 + L1MA7 LINE L1 6012 6291 0 25 0 0 0 chr18 31977085 31977110 -54700438 + AT_rich Low_complexity Low_complexity 1 25 0 353 276 120 10 chr18 31977413 31977605 -54699943 + L1M4c LINE L1 2520 2732 -3650 247 330 11 0 chr18 31977616 31977707 -54699841 + L1ME1 LINE L1 6071 6162 -4 1650 219 85 41 chr18 31978194 31978678 -54698870 + MLT1D LTR MaLR 1 505 0 1329 243 117 23 chr18 31978826 31979296 -54698252 + HsTC2c DNA Tc2 216 729 0 21 0 0 0 chr18 31979323 31979344 -54698204 + AT_rich Low_complexity Low_complexity 1 21 0 2302 71 20 0 chr18 31979579 31979875 -54697673 + AluY SINE Alu 1 302 -9 22 88 0 0 chr18 31981881 31981938 -54695610 + AT_rich Low_complexity Low_complexity 1 57 0 1677 255 87 37 chr18 31981960 31982556 -54694992 + MLT1E2 LTR MaLR 1 626 0 375 234 60 93 chr18 31982682 31982895 -54694653 + MLT1E2 LTR MaLR 137 290 -336 21 57 0 0 chr18 31983591 31983626 -54693922 + AT_rich Low_complexity Low_complexity 1 35 0 268 363 106 11 chr18 31985134 31985407 -54692141 + L2 LINE L2 2557 2855 -459 202 360 0 0 chr18 31985980 31986055 -54691493 - MIR SINE MIR -1 261 187 29 70 0 0 chr18 31986330 31986387 -54691161 + AT_rich Low_complexity Low_complexity 1 57 0 24 32 0 0 chr18 31986917 31986948 -54690600 + AT_rich Low_complexity Low_complexity 1 31 0 742 283 74 37 chr18 31987466 31987881 -54689667 + LTR33 LTR ERVL 7 514 -7 4660 35 5 2 chr18 31988189 31988756 -54688792 - L1PA5 LINE L1 -2 6152 5584 630 286 0 6 chr18 31989858 31990029 -54687519 - MER5B DNA MER1_type 0 178 9 5116 184 214 74 chr18 31990383 31991922 -54685626 + MER52A LTR ERV1 1 1755 0 1043 350 65 38 chr18 31991938 31992202 -54685346 + ERVL LTR ERVL 1953 2209 -3555 2050 149 34 8 chr18 31992202 31992557 -54684991 - THE1B LTR MaLR 0 364 1 1043 350 65 38 chr18 31992557 31993047 -54684501 + ERVL LTR ERVL 2209 2727 -3037 626 330 66 15 chr18 31993225 31993447 -54684101 + ERVL LTR ERVL 2950 3196 -2568 1365 209 82 3 chr18 31993447 31993762 -54683786 + MER58B DNA MER1_type 2 341 0 626 330 66 15 chr18 31993762 31993872 -54683676 + ERVL LTR ERVL 3196 3299 -2465 263 390 0 0 chr18 31993887 31993992 -54683556 + ERVL LTR ERVL 4176 4280 -1484 1212 330 84 44 chr18 31994037 31994408 -54683140 + ERVL LTR ERVL 3388 3743 -2021 2027 143 0 7 chr18 31994408 31994709 -54682839 + AluSx SINE Alu 6 304 -8 1212 330 84 44 chr18 31994709 31995358 -54682190 + ERVL LTR ERVL 3743 4449 -1315 1910 179 23 55 chr18 31995361 31995796 -54681752 - MSTC LTR MaLR -7 421 1 555 328 48 67 chr18 31995843 31996279 -54681269 + ERVL LTR ERVL 4457 4884 -770 318 369 12 12 chr18 31996509 31996677 -54680871 + ERVL LTR ERVL 5169 5336 -428 1085 291 111 30 chr18 31996912 31997373 -54680175 + LTR33 LTR ERVL 1 498 -23 215 98 0 49 chr18 31997866 31997907 -54679641 + (TAAAAA)n Simple_repeat Simple_repeat 3 41 0 23 0 0 0 chr18 31998391 31998414 -54679134 + AT_rich Low_complexity Low_complexity 1 23 0 430 224 121 46 chr18 31998914 31999088 -54678460 + MER53 DNA DNA 1 187 -2 216 200 0 0 chr18 31999449 31999499 -54678049 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 26 0 0 0 chr18 31999775 31999801 -54677747 + AT_rich Low_complexity Low_complexity 1 26 0 473 342 64 24 chr18 31999846 32000141 -54677407 + L2 LINE L2 3002 3308 -5 244 228 38 25 chr18 32000462 32000541 -54677007 + L1ME3A LINE L1 1875 1954 -4442 367 221 0 0 chr18 32000900 32000968 -54676580 + AluJb SINE Alu 49 116 -186 245 50 0 25 chr18 32000971 32001011 -54676537 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 323 290 73 56 chr18 32001041 32001382 -54676166 + L1ME3A LINE L1 2329 2675 -3540 848 307 95 39 chr18 32001580 32002568 -54674980 + L1ME3A LINE L1 3623 4666 -1549 1714 295 86 20 chr18 32002576 32003427 -54674121 + L1ME3A LINE L1 5324 6230 -9 1643 210 6 9 chr18 32003882 32004201 -54673347 - MLT1A1 LTR MaLR 0 365 48 333 283 182 13 chr18 32004675 32004834 -54672714 - MIR SINE MIR -75 187 2 385 273 55 27 chr18 32005076 32005296 -54672252 + MER20B DNA MER1_type 556 781 -2 222 374 89 8 chr18 32005356 32005479 -54672069 - L2 LINE L2 -615 2699 2567 1727 176 7 3 chr18 32005562 32005864 -54671684 - AluSx SINE Alu -9 303 1 4388 98 65 6 chr18 32005888 32006538 -54671010 - LTR12 LTR ERV1 0 688 1 224 368 68 16 chr18 32006730 32006980 -54670568 - L2 LINE L2 -1158 2156 1894 296 260 135 31 chr18 32006990 32007086 -54670462 - MER45 DNA AcHobo -70 108 3 269 282 32 53 chr18 32007520 32007643 -54669905 + MER5B DNA MER1_type 1 121 -68 344 282 58 26 chr18 32007696 32007852 -54669696 + MER5B DNA MER1_type 5 165 -13 2013 214 83 26 chr18 32009843 32010423 -54667125 + LTR48B LTR ERV1 32 644 0 1307 164 0 0 chr18 32010423 32010649 -54666899 + Tigger4(Zombi) DNA MER2_type 2506 2731 0 505 275 92 58 chr18 32010657 32010862 -54666686 + L1MEc LINE L1 1013 1209 -5187 1947 110 4 0 chr18 32010862 32011126 -54666422 + AluSp SINE Alu 39 303 -10 505 275 92 58 chr18 32011126 32011703 -54665845 + L1MEc LINE L1 1209 1822 -4574 22 56 0 0 chr18 32012022 32012058 -54665490 + AT_rich Low_complexity Low_complexity 1 36 0 5475 173 16 7 chr18 32012128 32013217 -54664331 - L1MA6 LINE L1 -10 6290 5192 4610 183 20 23 chr18 32013216 32013956 -54663592 + L1 LINE L1 4170 4908 -1238 * 2417 73 0 0 chr18 32013956 32014257 -54663291 + AluY SINE Alu 1 301 -10 4610 183 20 23 chr18 32014257 32014532 -54663016 + L1 LINE L1 4908 5182 -964 26 30 0 0 chr18 32014926 32014959 -54662589 + AT_rich Low_complexity Low_complexity 1 33 0 1361 226 50 21 chr18 32016099 32016476 -54661072 - MER90 LTR ERV1 -3 611 224 901 224 36 39 chr18 32016515 32016796 -54660752 - LTR4 LTR ERV1 0 596 317 566 224 34 67 chr18 32017363 32017542 -54660006 - MER90 LTR ERV1 -439 175 3 1427 194 46 7 chr18 32017543 32017827 -54659721 - AluJb SINE Alu -17 295 1 407 314 218 4 chr18 32019048 32019300 -54658248 - L2 LINE L2 -5 3308 3003 24 0 0 0 chr18 32019575 32019599 -54657949 + AT_rich Low_complexity Low_complexity 1 24 0 248 287 88 23 chr18 32020547 32020660 -54656888 - MIR SINE MIR -86 122 17 25 31 0 0 chr18 32022579 32022611 -54654937 + AT_rich Low_complexity Low_complexity 1 32 0 180 77 0 0 chr18 32023119 32023145 -54654403 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 2137 132 3 0 chr18 32023326 32023651 -54653897 - AluSp SINE Alu 0 330 5 355 289 41 0 chr18 32024273 32024394 -54653154 + L1ME3A LINE L1 5515 5640 -522 5209 161 56 10 chr18 32024402 32025537 -54652011 - Tigger3b DNA MER2_type -6 1225 1 434 274 57 6 chr18 32025548 32025723 -54651825 + L1ME3A LINE L1 5656 5839 -331 798 221 0 28 chr18 32025736 32025917 -54651631 + AluJb SINE Alu 137 312 0 250 250 24 0 chr18 32025919 32026003 -54651545 + L1ME3A LINE L1 5850 5935 -235 649 196 94 149 chr18 32026384 32026857 -54650691 + MLT2C2 LTR ERVL 28 462 -2 9124 218 33 5 chr18 32026936 32029340 -54648208 + ERVL-C2 LTR ERVL 97 2579 -3185 294 284 0 0 chr18 32031289 32031377 -54646171 - L1ME4a LINE L1 -217 5904 5817 273 307 154 41 chr18 32031582 32031849 -54645699 - L1ME4a LINE L1 -432 5689 5393 379 113 28 0 chr18 32031852 32031923 -54645625 + (TA)n Simple_repeat Simple_repeat 1 73 0 24 0 0 0 chr18 32032008 32032032 -54645516 + AT_rich Low_complexity Low_complexity 1 24 0 24 53 0 0 chr18 32032426 32032464 -54645084 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr18 32032857 32032887 -54644661 + AT_rich Low_complexity Low_complexity 1 30 0 3968 152 66 24 chr18 32034384 32035174 -54642374 - LTR1B LTR ERV1 -1 825 3 243 354 137 36 chr18 32036242 32036519 -54641029 + L2 LINE L2 2971 3275 -38 * 453 295 166 5 chr18 32036501 32036718 -54640830 + MIR SINE MIR 11 262 0 246 311 0 22 chr18 32036721 32036811 -54640737 + CT-rich Low_complexity Low_complexity 1 88 0 364 260 73 7 chr18 32036959 32037109 -54640439 - Charlie2a DNA MER1_type -81 2781 2622 644 205 8 0 chr18 32037109 32037236 -54640312 - L1 LINE L1 -2433 3713 3586 2115 230 82 9 chr18 32037241 32037902 -54639646 - Charlie2a DNA MER1_type -223 2639 1931 711 257 35 15 chr18 32037902 32038163 -54639385 - L1MDb LINE L1 -5289 1254 989 815 279 98 57 chr18 32038736 32039296 -54638252 - L1MDb LINE L1 -5942 598 16 632 238 54 5 chr18 32039296 32039481 -54638067 - Charlie2a DNA MER1_type -914 1948 1755 391 291 39 24 chr18 32090823 32090950 -54586598 - L2 LINE L2 -1 3312 3184 231 329 0 0 chr18 32090954 32091027 -54586521 + MIR SINE MIR 78 150 -112 34 24 0 0 chr18 32091085 32091126 -54586422 + AT_rich Low_complexity Low_complexity 1 41 0 227 403 25 0 chr18 32091314 32091433 -54586115 + L2 LINE L2 3146 3267 -5 1484 52 0 0 chr18 32091682 32091855 -54585693 + AluY SINE Alu 29 201 -110 207 299 104 0 chr18 32092744 32092821 -54584727 - MIR SINE MIR -58 204 120 342 300 85 58 chr18 32094047 32094340 -54583208 + L1MEd LINE L1 811 1111 -5008 364 305 61 20 chr18 32094480 32094677 -54582871 + HAL1 LINE L1 1453 1657 -850 30 0 0 0 chr18 32094780 32094810 -54582738 + AT_rich Low_complexity Low_complexity 1 30 0 2878 169 13 29 chr18 32094820 32095345 -54582203 + Tigger7 DNA MER2_type 1 517 -1970 628 156 0 0 chr18 32095345 32095441 -54582107 + Tigger7 DNA MER2_type 2392 2487 0 595 324 79 40 chr18 32095587 32096081 -54581467 + L1ME LINE L1 6 518 -5552 459 287 83 73 chr18 32096314 32096628 -54580920 + L1ME LINE L1 586 902 -5178 288 0 0 0 chr18 32096694 32096726 -54580822 + (CA)n Simple_repeat Simple_repeat 1 32 0 266 299 54 43 chr18 32096734 32096918 -54580630 + L1MC1 LINE L1 473 658 -6063 1700 204 0 0 chr18 32096991 32097299 -54580249 + AluJo SINE Alu 1 308 -4 526 201 40 50 chr18 32097310 32097509 -54580039 + L1MC1 LINE L1 2454 2650 -3890 399 127 0 0 chr18 32097509 32097572 -54579976 + (TA)n Simple_repeat Simple_repeat 2 64 0 316 307 150 20 chr18 32097634 32097787 -54579761 - MIR SINE MIR -58 204 32 9344 248 31 14 chr18 32098285 32101416 -54576132 + L1MC1 LINE L1 2652 5833 -744 2384 258 59 31 chr18 32101415 32102098 -54575450 + L1PA11 LINE L1 1 702 -6879 * 1294 173 74 75 chr18 32102102 32102575 -54574973 - MER51A LTR ERV1 0 634 1 22106 179 26 22 chr18 32102600 32105427 -54572121 + L1PA11 LINE L1 1000 3816 -3796 480 115 26 0 chr18 32105427 32105505 -54572043 - MADE1 DNA Mariner 0 80 1 22106 179 26 22 chr18 32105505 32106918 -54570630 + L1PA11 LINE L1 3816 5223 -2389 1920 147 0 3 chr18 32106918 32107261 -54570287 + AluSx SINE Alu 1 342 0 22106 179 26 22 chr18 32107261 32108793 -54568755 + L1PA11 LINE L1 5223 7612 0 4575 155 44 6 chr18 32108814 32109647 -54567901 + L1MC1 LINE L1 5845 6709 -18 451 337 94 42 chr18 32109668 32110149 -54567399 + L1M4 LINE L1 2110 2615 -3531 344 140 0 0 chr18 32110692 32110742 -54566806 - THE1C LTR MaLR 0 428 379 1449 131 20 12 chr18 32110746 32110990 -54566558 - THE1C LTR MaLR -129 246 1 9798 115 35 41 chr18 32110990 32112580 -54564968 - THE1C-int LTR MaLR 0 1580 1 2336 126 13 11 chr18 32112580 32112954 -54564594 - THE1C LTR MaLR 0 375 1 21 57 0 0 chr18 32112967 32113002 -54564546 + AT_rich Low_complexity Low_complexity 1 35 0 300 360 40 24 chr18 32113348 32113473 -54564075 + L2 LINE L2 3146 3272 0 334 284 116 32 chr18 32113710 32113900 -54563648 - L1M4 LINE L1 -3003 3143 2938 24 32 0 0 chr18 32114518 32114549 -54562999 + AT_rich Low_complexity Low_complexity 1 31 0 2096 137 42 22 chr18 32116007 32116364 -54561184 - THE1B LTR MaLR 0 364 1 262 250 86 78 chr18 32117128 32117256 -54560292 + L2 LINE L2 3163 3291 -22 28 0 0 0 chr18 32117416 32117444 -54560104 + AT_rich Low_complexity Low_complexity 1 28 0 225 65 0 0 chr18 32117635 32117666 -54559882 + (TC)n Simple_repeat Simple_repeat 2 32 0 336 125 56 14 chr18 32117938 32118010 -54559538 + MLT1D LTR MaLR 431 505 0 992 246 42 15 chr18 32118158 32118418 -54559130 - MLT1D LTR MaLR -75 430 164 626 191 27 90 chr18 32118452 32118640 -54558908 - MLT1D LTR MaLR -329 176 1 187 342 138 13 chr18 32119080 32119232 -54558316 + MIR SINE MIR 66 236 -26 245 357 20 0 chr18 32119294 32119394 -54558154 + MIR3 SINE MIR 63 165 -43 1779 113 68 86 chr18 32121339 32121496 -54556052 + THE1C LTR MaLR 1 159 -216 2176 98 0 3 chr18 32121496 32121783 -54555765 - AluSq SINE Alu -14 299 14 1779 113 68 86 chr18 32121783 32122007 -54555541 + THE1C LTR MaLR 159 375 0 370 79 32 0 chr18 32122335 32122398 -54555150 + (CA)n Simple_repeat Simple_repeat 2 66 0 298 279 163 0 chr18 32122900 32122986 -54554562 + MER5A DNA MER1_type 4 103 -86 736 316 90 23 chr18 32123105 32123504 -54554044 + MLT1J1 LTR MaLR 1 426 -20 25 83 0 0 chr18 32124730 32124790 -54552758 + AT_rich Low_complexity Low_complexity 1 60 0 21 57 0 0 chr18 32125114 32125149 -54552399 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr18 32125648 32125669 -54551879 + AT_rich Low_complexity Low_complexity 1 21 0 392 306 66 15 chr18 32127155 32127351 -54550197 - MIR SINE MIR -6 256 51 3559 187 88 35 chr18 32127815 32128666 -54548882 + MER49 LTR ERV1 1 896 -27 910 187 146 34 chr18 32128695 32128963 -54548585 - AluJo SINE Alu -14 298 1 209 296 72 24 chr18 32129466 32129591 -54547957 + L2 LINE L2 1257 1387 -1927 1890 156 88 0 chr18 32129646 32129985 -54547563 - Tigger2 DNA MER2_type -70 2648 2280 400 225 12 0 chr18 32129971 32130051 -54547497 + MER8 DNA MER2_type 159 239 0 * 306 345 111 35 chr18 32130204 32130807 -54546741 + L2 LINE L2 1637 2285 -1029 579 328 86 0 chr18 32130823 32131021 -54546527 + MIR SINE MIR 11 225 -37 2439 196 20 4 chr18 32131023 32131473 -54546075 + MER70A LTR ERVL 2 458 -14 339 385 109 10 chr18 32131795 32132283 -54545265 + L2 LINE L2 2139 2674 -640 234 185 56 0 chr18 32133132 32133186 -54544362 - MER58A DNA MER1_type -5 102 46 1576 211 49 60 chr18 32133190 32133660 -54543888 - MLT1C LTR MaLR -2 465 1 301 387 17 8 chr18 32133728 32133847 -54543701 + L2 LINE L2 3134 3253 -19 196 448 30 7 chr18 32133865 32134135 -54543413 + L2 LINE L2 2581 2856 -458 207 292 14 56 chr18 32134439 32134511 -54543037 + L2 LINE L2 3203 3271 -1 1098 122 17 6 chr18 32135018 32135199 -54542349 - L1PA14 LINE L1 -2 6159 5977 5220 144 41 6 chr18 32136319 32137560 -54539988 - L1PA14 LINE L1 0 6812 5553 12632 195 5 13 chr18 32137560 32139746 -54537802 - L1PA14 LINE L1 -4619 2168 2 365 321 128 36 chr18 32140343 32140617 -54536931 + L3 LINE CR1 1067 1365 -212 278 268 41 21 chr18 32140719 32140816 -54536732 + MIR SINE MIR 154 252 -10 214 265 0 0 chr18 32140820 32140869 -54536679 + (TAG)n Simple_repeat Simple_repeat 2 50 0 261 383 35 9 chr18 32141681 32141796 -54535752 - MIR SINE MIR -117 145 28 223 204 32 21 chr18 32142450 32142543 -54535005 + (TA)n Simple_repeat Simple_repeat 2 95 0 25 75 0 0 chr18 32142699 32142752 -54534796 + AT_rich Low_complexity Low_complexity 1 53 0 1961 286 96 81 chr18 32142877 32144711 -54532837 + HAL1 LINE L1 48 1909 -598 346 264 147 103 chr18 32144711 32145003 -54532545 - MLT1H LTR MaLR 0 549 245 226 286 0 0 chr18 32145117 32145180 -54532368 - MLT1H LTR MaLR -486 63 1 636 248 72 38 chr18 32145254 32145601 -54531947 + HAL1 LINE L1 1979 2337 -170 294 263 88 26 chr18 32145610 32145724 -54531824 + HAL1 LINE L1 2387 2507 0 21 0 0 0 chr18 32145731 32145752 -54531796 + AT_rich Low_complexity Low_complexity 1 21 0 355 274 21 15 chr18 32147721 32147835 -54529713 + MIR SINE MIR 23 139 -69 21 36 0 0 chr18 32148279 32148307 -54529241 + AT_rich Low_complexity Low_complexity 1 28 0 313 246 82 33 chr18 32148769 32148891 -54528657 - L1ME4a LINE L1 -4 6117 5990 23 0 0 0 chr18 32149208 32149231 -54528317 + AT_rich Low_complexity Low_complexity 1 23 0 1084 143 125 3 chr18 32149536 32149855 -54527693 + LTR24 LTR ERV1 10 467 0 291 344 47 39 chr18 32151391 32151519 -54526029 - L2 LINE L2 -7 3265 3137 2208 116 0 0 chr18 32152329 32152622 -54524926 - AluSg SINE Alu -15 295 3 3812 193 39 38 chr18 32155023 32155961 -54521587 - L1MC3 LINE L1 -20 7765 6827 220 148 66 0 chr18 32156407 32156468 -54521080 + (TA)n Simple_repeat Simple_repeat 1 65 0 343 134 0 75 chr18 32157059 32157126 -54520422 + MER39 LTR ERV1 606 667 -40 6432 152 55 10 chr18 32158224 32159086 -54518462 - Tigger3b DNA MER2_type -1798 1230 301 408 20 0 0 chr18 32159086 32159135 -54518413 + (CA)n Simple_repeat Simple_repeat 2 50 0 6432 152 55 10 chr18 32159135 32159447 -54518101 - Tigger3b DNA MER2_type -2727 301 4 489 192 0 0 chr18 32160073 32160151 -54517397 + Tigger3(Golem) DNA MER2_type 4 81 -2948 * 897 225 142 22 chr18 32160147 32160458 -54517090 + LTR16A LTR ERVL 103 450 0 478 342 56 53 chr18 32161588 32161948 -54515600 + L2 LINE L2 2596 2956 -358 559 279 82 52 chr18 32162031 32162278 -54515270 + L2 LINE L2 2973 3211 -102 1848 179 3 6 chr18 32162278 32162591 -54514957 - AluJb SINE Alu 0 312 1 559 279 82 52 chr18 32162591 32162612 -54514936 + L2 LINE L2 3211 3230 -83 1940 154 177 3 chr18 32162612 32162996 -54514552 - LTR47A LTR ERVL -1 451 1 559 279 82 52 chr18 32162996 32163031 -54514517 + L2 LINE L2 3230 3286 -27 693 191 77 188 chr18 32164089 32164530 -54513018 - MSTD LTR MaLR -4 392 1 1265 273 79 31 chr18 32165462 32165816 -54511732 - L1M3de LINE L1 -4534 1357 958 180 0 0 0 chr18 32165816 32165836 -54511712 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1265 273 79 31 chr18 32165836 32166115 -54511433 - L1M3de LINE L1 -4933 958 694 839 317 52 22 chr18 32166482 32166879 -54510669 - L1M3de LINE L1 -5213 678 1 25 51 0 0 chr18 32170730 32170769 -54506779 + AT_rich Low_complexity Low_complexity 1 39 0 679 299 90 35 chr18 32170946 32171290 -54506258 + L2 LINE L2 2580 2942 -372 444 269 41 53 chr18 32171290 32171461 -54506087 + L2 LINE L2 3145 3313 0 389 315 54 0 chr18 32171458 32171607 -54505941 - L2 LINE L2 -12 3301 3145 * 27 0 0 0 chr18 32171869 32171896 -54505652 + AT_rich Low_complexity Low_complexity 1 27 0 3625 114 15 0 chr18 32172041 32172583 -54504965 - L1PA13 LINE L1 -11 6152 5603 5133 155 32 1 chr18 32172587 32173656 -54503892 - L1PA13 LINE L1 -716 5458 4358 267 170 0 0 chr18 32174029 32174076 -54503472 - MLT2B1 LTR ERVL 0 520 474 40 37 0 0 chr18 32174076 32174130 -54503418 + AT_rich Low_complexity Low_complexity 1 54 0 351 0 0 0 chr18 32174130 32174169 -54503379 + (TG)n Simple_repeat Simple_repeat 2 40 0 25391 144 10 19 chr18 32174186 32180608 -54496940 + L1PA8A LINE L1 14 6443 -3 241 88 0 0 chr18 32180608 32180642 -54496906 + MLT2B1 LTR ERVL 473 506 -14 2011 199 82 20 chr18 32180676 32181128 -54496420 - MLT2B1 LTR ERVL -40 480 1 220 263 0 0 chr18 32181519 32181576 -54495972 + (CA)n Simple_repeat Simple_repeat 2 58 0 381 239 23 0 chr18 32182561 32182649 -54494899 + MER94 DNA DNA 20 109 -25 291 152 38 0 chr18 32182829 32182908 -54494640 + (TA)n Simple_repeat Simple_repeat 1 82 0 1652 99 5 0 chr18 32183713 32183936 -54493612 + AluY SINE Alu 84 307 -4 213 39 0 0 chr18 32184068 32184094 -54493454 + (A)n Simple_repeat Simple_repeat 1 26 0 180 179 0 0 chr18 32185746 32185785 -54491763 + GA-rich Low_complexity Low_complexity 2 40 0 287 122 0 0 chr18 32186215 32186256 -54491292 - U2 snRNA snRNA -147 41 1 1632 178 33 82 chr18 32186813 32187263 -54490285 - MSTB1 LTR MaLR 0 432 5 181 333 118 46 chr18 32187595 32188010 -54489538 + L2 LINE L2 2295 2739 -575 2110 97 0 0 chr18 32188072 32188390 -54489158 + AluY SINE Alu 3 320 0 1706 184 0 7 chr18 32188668 32188967 -54488581 - AluJb SINE Alu -15 297 1 1022 239 65 34 chr18 32189362 32189684 -54487864 + MER46C DNA MER2_type 2 333 -5 877 281 28 0 chr18 32190269 32190486 -54487062 - MIR SINE MIR -35 227 5 2506 239 95 57 chr18 32191464 32192243 -54485305 - L1MC4a LINE L1 -1 7807 6974 2205 143 8 19 chr18 32192243 32192622 -54484926 - THE1C LTR MaLR 0 375 1 2506 239 95 57 chr18 32192622 32192911 -54484637 - L1MC4a LINE L1 -834 6974 6698 1700 163 76 20 chr18 32192911 32193266 -54484282 + THE1C LTR MaLR 1 375 0 896 163 95 42 chr18 32194028 32194218 -54483330 + AluJb SINE Alu 112 311 -1 243 287 47 47 chr18 32194219 32194369 -54483179 + LTR16C LTR ERVL 342 491 0 24 67 0 0 chr18 32194422 32194467 -54483081 + AT_rich Low_complexity Low_complexity 1 45 0 252 86 0 0 chr18 32194580 32194615 -54482933 + (CA)n Simple_repeat Simple_repeat 2 36 0 1017 296 108 8 chr18 32194741 32195211 -54482337 + L1MEc LINE L1 44 560 -5836 13044 213 44 23 chr18 32195693 32201910 -54475638 + L1MA4 LINE L1 1 6855 -510 462 124 78 0 chr18 32201915 32202068 -54475480 + (TA)n Simple_repeat Simple_repeat 2 166 0 189 89 67 0 chr18 32202178 32202223 -54475325 + (TA)n Simple_repeat Simple_repeat 1 48 0 2483 147 27 35 chr18 32202228 32202744 -54474804 + L1MA4 LINE L1 6839 7350 -12 228 164 0 55 chr18 32202904 32202959 -54474589 - L1MC4 LINE L1 -1339 6703 6652 610 287 11 0 chr18 32202962 32203150 -54474398 + L1ME LINE L1 5606 5795 -369 22 0 0 0 chr18 32203882 32203904 -54473644 + AT_rich Low_complexity Low_complexity 1 22 0 709 216 0 8 chr18 32204345 32204479 -54473069 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr18 32205157 32205180 -54472368 + AT_rich Low_complexity Low_complexity 1 23 0 1418 137 77 83 chr18 32207171 32207484 -54470064 + MER67D LTR ERV1 1 311 -203 24 32 0 0 chr18 32207770 32207801 -54469747 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr18 32207844 32207865 -54469683 + AT_rich Low_complexity Low_complexity 1 21 0 224 338 0 0 chr18 32208121 32208192 -54469356 + MIR SINE MIR 174 244 -18 * 452 316 13 7 chr18 32208188 32208340 -54469208 + MIR SINE MIR 84 236 -26 2821 121 26 0 chr18 32209406 32209828 -54467720 - MER57B LTR ERV1 0 434 2 2508 143 23 23 chr18 32210042 32210477 -54467071 - MER50 LTR ERV1 -299 435 1 243 130 22 22 chr18 32211204 32211250 -54466298 - MIR SINE MIR -71 191 146 4655 148 45 22 chr18 32211572 32212095 -54465453 + MER4D LTR ERV1 1 511 -392 2319 88 0 0 chr18 32212095 32212390 -54465158 + AluY SINE Alu 2 296 -15 4655 148 45 22 chr18 32212390 32212689 -54464859 + MER4D LTR ERV1 506 843 -55 3917 108 2 0 chr18 32212689 32213242 -54464306 + MER41A LTR ERV1 1 554 0 2761 140 15 0 chr18 32213293 32213734 -54463814 + MER41A-int LTR ERV1 77 625 -5321 * 12738 112 29 22 chr18 32213714 32216825 -54460723 + MER41A-int LTR ERV1 1416 5943 -3 3812 113 4 0 chr18 32216826 32217377 -54460171 + MER41A LTR ERV1 2 554 0 460 94 0 0 chr18 32217377 32217441 -54460107 + MER4E LTR ERV1 703 766 0 1839 255 35 18 chr18 32217441 32217955 -54459593 + LTR26 LTR ERV1 81 603 0 186 118 0 0 chr18 32218363 32218397 -54459151 + (TG)n Simple_repeat Simple_repeat 1 34 0 27 29 0 0 chr18 32218445 32218479 -54459069 + AT_rich Low_complexity Low_complexity 1 34 0 3035 175 23 60 chr18 32218745 32219478 -54458070 + MER67C LTR ERV1 5 710 0 393 75 0 0 chr18 32220004 32220057 -54457491 + (TG)n Simple_repeat Simple_repeat 2 54 0 607 283 104 17 chr18 32220324 32220564 -54456984 - MIR SINE MIR 0 262 2 410 296 132 13 chr18 32221122 32221274 -54456274 + MIR SINE MIR 11 180 -82 26 64 0 0 chr18 32221406 32221453 -54456095 + AT_rich Low_complexity Low_complexity 1 47 0 1927 88 0 4 chr18 32221573 32221824 -54455724 + AluY SINE Alu 35 284 -27 24 32 0 0 chr18 32222219 32222250 -54455298 + AT_rich Low_complexity Low_complexity 1 31 0 328 314 95 7 chr18 32222263 32222400 -54455148 - L2 LINE L2 0 3313 3165 7149 40 0 0 chr18 32222616 32223471 -54454077 - L1PA5 LINE L1 0 6154 5300 1936 180 39 14 chr18 32224629 32224984 -54452564 + THE1B LTR MaLR 1 364 0 10569 119 12 13 chr18 32224984 32226566 -54450982 + THE1B-int LTR MaLR 1 1580 0 2141 154 31 14 chr18 32226566 32226924 -54450624 + THE1B LTR MaLR 1 364 0 25 31 0 0 chr18 32227602 32227634 -54449914 + AT_rich Low_complexity Low_complexity 1 32 0 30 59 0 0 chr18 32228277 32228328 -54449220 + AT_rich Low_complexity Low_complexity 1 51 0 987 244 54 40 chr18 32228384 32228864 -54448684 - L1MC5 LINE L1 -371 7590 7104 765 268 47 67 chr18 32229025 32229428 -54448120 + MLT1J LTR MaLR 77 471 -40 5548 135 24 0 chr18 32229456 32230405 -54447143 - L1PA16 LINE L1 -10 6156 5186 205 97 0 0 chr18 32231191 32231222 -54446326 + L2 LINE L2 3277 3307 -6 4932 131 96 75 chr18 32231446 32232581 -54444967 + pTR5 LTR ERV1 729 2020 -418 392 220 11 13 chr18 32232581 32232693 -54444855 + LTR30 LTR ERV1 377 475 -94 * 1457 114 3 0 chr18 32232663 32232908 -54444640 + pTR5 LTR ERV1 177 2173 -265 374 362 99 42 chr18 32233012 32233446 -54444102 - L2 LINE L2 0 3272 2814 26 30 0 0 chr18 32235160 32235193 -54442355 + AT_rich Low_complexity Low_complexity 1 33 0 727 282 107 78 chr18 32235222 32235736 -54441812 - MLT1F LTR MaLR -11 531 3 2266 94 0 10 chr18 32236010 32236308 -54441240 + AluSq SINE Alu 1 295 -18 1178 341 51 16 chr18 32236308 32237056 -54440492 - ERVL LTR ERVL -1120 4644 3871 182 298 21 0 chr18 32239399 32239446 -54438102 + L3 LINE CR1 406 453 -1124 421 219 0 0 chr18 32239523 32239605 -54437943 + MLT1C LTR MaLR 1 82 -385 2621 144 42 0 chr18 32239606 32240010 -54437538 - MSTC LTR MaLR -2 426 6 1368 219 82 11 chr18 32240014 32240379 -54437169 + MLT1C LTR MaLR 77 467 0 519 319 100 4 chr18 32240637 32240866 -54436682 + MIR SINE MIR 12 262 0 331 263 194 28 chr18 32241042 32241259 -54436289 + MIR SINE MIR 3 255 -7 996 290 86 13 chr18 32241536 32241908 -54435640 + LTR16A LTR ERVL 3 401 -49 249 178 44 0 chr18 32241957 32242002 -54435546 + LTR16A LTR ERVL 404 450 0 1894 141 0 13 chr18 32244597 32244896 -54432652 + AluSx SINE Alu 6 300 -12 2052 180 25 42 chr18 32245094 32245527 -54432021 - MSTB LTR MaLR 0 426 1 188 316 66 0 chr18 32245595 32245671 -54431877 - MIR SINE MIR -30 232 152 405 299 29 5 chr18 32246041 32246263 -54431285 + L1ME LINE L1 5563 5727 -394 238 200 0 25 chr18 32246385 32246465 -54431083 + GA-rich Low_complexity Low_complexity 3 80 0 687 140 9 0 chr18 32246680 32246794 -54430754 + AluSp SINE Alu 1 115 -198 218 283 0 0 chr18 32247730 32247776 -54429772 + (TATG)n Simple_repeat Simple_repeat 4 49 0 312 347 124 44 chr18 32248810 32249286 -54428262 + L1MC/D LINE L1 5332 5845 -1963 14469 144 17 8 chr18 32249398 32251794 -54425754 + Tigger1 DNA MER2_type 1 2417 -1 4476 130 7 0 chr18 32253271 32253954 -54423594 - L1PA16 LINE L1 -5 6161 5474 208 385 79 48 chr18 32254971 32255350 -54422198 - L2 LINE L2 0 3272 2882 207 366 85 20 chr18 32257750 32257903 -54419645 + MIR3 SINE MIR 44 206 -2 399 258 75 0 chr18 32258305 32258425 -54419123 + MIR SINE MIR 118 246 -16 184 213 21 21 chr18 32259196 32259243 -54418305 + L2 LINE L2 1175 1221 -2093 7703 83 5 16 chr18 32259967 32261036 -54416512 + MER11C LTR ERVK 1 1057 -14 1463 188 89 3 chr18 32262162 32262476 -54415072 + L1MB7 LINE L1 5836 6176 -8 310 348 55 17 chr18 32262833 32263014 -54414534 - MIR SINE MIR -74 188 1 830 252 61 104 chr18 32263244 32263579 -54413969 + L1ME3A LINE L1 5531 5826 -344 7082 153 27 15 chr18 32263579 32264713 -54412835 + HSMAR2 DNA Mariner 2 1155 -147 2258 110 0 0 chr18 32264713 32265022 -54412526 - AluSg SINE Alu -1 309 1 7082 153 27 15 chr18 32265022 32265172 -54412376 + HSMAR2 DNA Mariner 1155 1302 0 830 252 61 104 chr18 32265172 32265478 -54412070 + L1ME3A LINE L1 5826 6144 -26 655 316 97 26 chr18 32265825 32266383 -54411165 - L2 LINE L2 -252 3061 2385 905 225 67 39 chr18 32267301 32267585 -54409963 - MER97a DNA MER1_type? -602 292 1 195 129 0 0 chr18 32267626 32267657 -54409891 + (CATA)n Simple_repeat Simple_repeat 2 32 0 222 268 142 55 chr18 32269021 32269148 -54408400 + L2 LINE L2 3146 3283 -30 286 347 25 8 chr18 32269284 32269405 -54408143 + MIR3 SINE MIR 40 162 -46 740 319 58 56 chr18 32269432 32269911 -54407637 - MLT1J LTR MaLR -31 480 1 188 211 74 84 chr18 32270514 32270609 -54406939 + MIR SINE MIR 119 212 -50 2355 76 0 0 chr18 32272050 32272352 -54405196 - AluY SINE Alu -9 302 1 12921 197 30 30 chr18 32273618 32274905 -54402643 + L1P LINE L1 1723 3009 -3137 2028 116 35 3 chr18 32274905 32275190 -54402358 + AluY SINE Alu 1 294 -17 12921 197 30 30 chr18 32275190 32276892 -54400656 + L1P LINE L1 3009 4710 -1436 419 308 128 26 chr18 32276915 32277227 -54400321 + L1MC1 LINE L1 1259 1602 -4794 216 91 91 18 chr18 32277340 32277395 -54400153 + (TATATG)n Simple_repeat Simple_repeat 1 59 0 4235 160 57 71 chr18 32277976 32278930 -54398618 + L1MCa LINE L1 28 967 -5459 1506 238 29 25 chr18 32278934 32279379 -54398169 + L1MC1 LINE L1 4571 5017 -1198 3741 148 25 9 chr18 32279390 32280065 -54397483 + L1MC1 LINE L1 5704 6389 -13 4125 201 21 36 chr18 32280627 32280908 -54396640 - L1MB1 LINE L1 0 6754 6470 1977 130 20 7 chr18 32280908 32281207 -54396341 - AluSx SINE Alu -9 303 1 4125 201 21 36 chr18 32281207 32282807 -54394741 - L1MB1 LINE L1 -284 6470 4899 3867 138 105 28 chr18 32282824 32284213 -54393335 - pTR5 LTR ERV1 0 2606 1524 7223 252 61 26 chr18 32284237 32287321 -54390227 - L1MB1 LINE L1 -1847 4885 1955 1851 135 47 73 chr18 32287321 32287706 -54389842 + THE1C LTR MaLR 1 375 0 7223 252 61 26 chr18 32287706 32288758 -54388790 - L1MB1 LINE L1 -4777 1955 942 30010 114 14 24 chr18 32288785 32295228 -54382320 - L1PA8 LINE L1 -3 6484 1 891 322 32 23 chr18 32295228 32295657 -54381891 - L1MB1 LINE L1 -5212 1441 572 2049 106 14 3 chr18 32295809 32296091 -54381457 - AluSq SINE Alu -17 296 12 268 292 62 10 chr18 32296671 32296767 -54380781 + MIR SINE MIR 6 106 -156 1978 77 4 0 chr18 32298588 32298847 -54378701 + AluY SINE Alu 50 309 -2 303 122 44 133 chr18 32299386 32299476 -54378072 + L1MA10 LINE L1 6250 6331 -3 340 337 95 12 chr18 32299477 32299646 -54377902 + MIR SINE MIR 21 203 -59 1316 185 37 30 chr18 32299650 32299920 -54377628 + AluJo SINE Alu 22 293 -19 302 398 19 0 chr18 32301236 32301344 -54376204 - L1ME2 LINE L1 -84 6080 5971 714 325 20 31 chr18 32301460 32301917 -54375631 - L1ME3A LINE L1 -240 5922 5465 25 65 0 0 chr18 32306377 32306423 -54371125 + AT_rich Low_complexity Low_complexity 1 46 0 518 238 24 0 chr18 32307387 32307513 -54370035 - MER94 DNA DNA -4 130 2 207 139 0 0 chr18 32308071 32308107 -54369441 + (CA)n Simple_repeat Simple_repeat 2 37 0 310 278 28 7 chr18 32308826 32308970 -54368578 + (TA)n Simple_repeat Simple_repeat 2 148 0 3490 129 45 46 chr18 32309399 32310048 -54367500 + L1MC1 LINE L1 5668 6315 -18 21 36 0 0 chr18 32310273 32310301 -54367247 + AT_rich Low_complexity Low_complexity 1 28 0 317 325 46 13 chr18 32310335 32310486 -54367062 + L1ME LINE L1 5283 5438 -732 245 282 48 19 chr18 32310573 32310676 -54366872 + L1ME LINE L1 5574 5679 -442 * 978 129 11 44 chr18 32310671 32310875 -54366673 - L1MC1 LINE L1 -170 5996 5837 823 172 88 34 chr18 32311401 32311605 -54365943 + L1M1 LINE L1 4753 4967 -1179 189 0 0 0 chr18 32311605 32311626 -54365922 + (T)n Simple_repeat Simple_repeat 1 21 0 1006 201 0 0 chr18 32311626 32311820 -54365728 - L1PA8 LINE L1 0 6172 5979 872 317 44 30 chr18 32312286 32312652 -54364896 + MLT1K LTR MaLR 56 426 -162 1109 255 73 75 chr18 32312718 32313239 -54364309 + LTR67 LTR ERVL 29 548 -9 2403 60 0 0 chr18 32313393 32313695 -54363853 - L1PA8 LINE L1 -235 5937 5636 3185 77 0 0 chr18 32313700 32314115 -54363433 - L1P3 LINE L1 -415 5739 5325 1773 175 44 10 chr18 32314096 32314603 -54362945 + L1M1 LINE L1 4955 5473 -743 * 1132 67 0 0 chr18 32314605 32314740 -54362808 + AluSq/x SINE Alu 1 135 -177 2858 0 0 3 chr18 32314852 32315162 -54362386 + AluYa5 SINE Alu 1 309 -2 345 300 59 41 chr18 32315262 32315432 -54362116 + L1ME LINE L1 5320 5492 -629 298 306 19 37 chr18 32315480 32315588 -54361960 - L2 LINE L2 0 3313 3208 237 295 148 27 chr18 32316205 32316354 -54361194 + MIR3 SINE MIR 31 197 -11 557 237 8 0 chr18 32317174 32317292 -54360256 + L2 LINE L2 3190 3308 -5 968 252 41 42 chr18 32317582 32317859 -54359689 - MLT1F LTR MaLR -7 586 251 343 83 33 0 chr18 32318083 32318143 -54359405 + (TC)n Simple_repeat Simple_repeat 1 62 0 413 185 0 43 chr18 32318146 32318238 -54359310 - MLT1F LTR MaLR -477 90 3 292 309 17 62 chr18 32318476 32318654 -54358894 - MER5A DNA MER1_type 0 189 20 308 289 16 39 chr18 32318509 32318637 -54358911 + MER5B DNA MER1_type 29 153 -25 1670 130 13 0 chr18 32320065 32320329 -54357219 + AluSx SINE Alu 45 311 0 640 244 6 13 chr18 32320669 32320825 -54356723 - MLT1H1 LTR MaLR -13 542 388 683 118 10 0 chr18 32321074 32321176 -54356372 + LTR43 LTR ERV1 191 293 -309 188 348 67 0 chr18 32322272 32322361 -54355187 - L2 LINE L2 -810 2504 2410 1285 322 85 52 chr18 32322542 32323466 -54354082 - L2 LINE L2 -19 3294 2304 369 0 0 0 chr18 32323466 32323507 -54354041 + (CA)n Simple_repeat Simple_repeat 2 42 0 1285 322 85 52 chr18 32323507 32323990 -54353558 - L2 LINE L2 -1009 2304 1838 965 184 42 32 chr18 32323991 32324208 -54353340 + MER20 DNA MER1_type 1 219 0 288 314 98 74 chr18 32324245 32324624 -54352924 - L2 LINE L2 -1497 1817 1430 269 351 120 42 chr18 32324620 32325078 -54352470 + L2 LINE L2 2325 2818 -496 * 206 220 51 17 chr18 32326056 32326115 -54351433 + MIR SINE MIR 120 180 -82 2173 103 0 26 chr18 32327228 32327540 -54350008 + AluY SINE Alu 7 310 -1 1890 184 33 17 chr18 32328734 32329093 -54348455 - MLT1A1 LTR MaLR 0 365 1 1686 147 4 4 chr18 32330475 32330734 -54346814 + AluSx SINE Alu 33 291 -21 27 0 0 0 chr18 32331039 32331066 -54346482 + AT_rich Low_complexity Low_complexity 1 27 0 2257 108 3 6 chr18 32331950 32332264 -54345284 + AluSp SINE Alu 1 313 0 1895 244 37 59 chr18 32332617 32332681 -54344867 - MER119 DNA MER1_type 0 583 519 2378 65 3 7 chr18 32332681 32332991 -54344557 - AluY SINE Alu -2 309 1 1895 244 37 59 chr18 32332991 32333515 -54344033 - MER119 DNA MER1_type -64 519 8 195 184 0 0 chr18 32333647 32333685 -54343863 + (CA)n Simple_repeat Simple_repeat 1 38 0 382 326 121 14 chr18 32333712 32333853 -54343695 - L2 LINE L2 -1 3271 3116 334 280 91 7 chr18 32334763 32334906 -54342642 - MIR SINE MIR 0 262 108 2181 128 0 0 chr18 32337321 32337633 -54339915 + AluSx SINE Alu 1 312 0 270 0 0 0 chr18 32341168 32341198 -54336350 + (CA)n Simple_repeat Simple_repeat 1 30 0 186 323 0 0 chr18 32341385 32341450 -54336098 + MIR SINE MIR 153 217 -45 259 301 65 32 chr18 32341493 32341616 -54335932 - L2 LINE L2 0 3272 3146 21 0 0 0 chr18 32341685 32341706 -54335842 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr18 32341965 32341988 -54335560 + AT_rich Low_complexity Low_complexity 1 23 0 479 291 17 0 chr18 32342173 32342290 -54335258 - L2 LINE L2 0 3313 3195 754 153 0 8 chr18 32343021 32343145 -54334403 + L1PB4 LINE L1 6029 6151 -5 271 263 66 0 chr18 32343898 32343974 -54333574 + MIR SINE MIR 123 203 -59 214 245 20 0 chr18 32344363 32344412 -54333136 + (TA)n Simple_repeat Simple_repeat 1 50 0 2126 49 0 0 chr18 32344637 32344902 -54332646 + L1PA4 LINE L1 5886 6150 -5 21 57 0 0 chr18 32345901 32345936 -54331612 + AT_rich Low_complexity Low_complexity 1 35 0 1261 188 61 72 chr18 32346790 32347267 -54330281 - MSTB LTR MaLR 0 426 1 2163 160 18 10 chr18 32347638 32348037 -54329511 - L1PB4 LINE L1 0 6156 5755 926 120 10 154 chr18 32348056 32348264 -54329284 - L1P5 LINE L1 -363 5793 5616 24 67 0 0 chr18 32348360 32348405 -54329143 + AT_rich Low_complexity Low_complexity 1 45 0 1813 209 66 34 chr18 32348830 32349328 -54328220 + MER67D LTR ERV1 1 514 0 1221 115 0 0 chr18 32349407 32349581 -54327967 - AluSg/x SINE Alu -5 307 134 31 0 0 0 chr18 32352225 32352256 -54325292 + AT_rich Low_complexity Low_complexity 1 31 0 1570 94 13 21 chr18 32352349 32352583 -54324965 - MER1B DNA MER1_type 0 339 108 3201 273 69 19 chr18 32352638 32353812 -54323736 + L1ME1 LINE L1 22 1254 -5142 303 140 54 11 chr18 32353837 32353930 -54323618 + (TA)n Simple_repeat Simple_repeat 2 98 0 2645 261 69 21 chr18 32353931 32354977 -54322571 + L1ME1 LINE L1 3582 4677 -1538 845 187 25 10 chr18 32354953 32355151 -54322397 + L1PA13 LINE L1 4881 5081 -1134 * 5129 15 10 2 chr18 32355162 32355756 -54321792 + L1PA4 LINE L1 5539 6137 -18 * 5690 108 30 14 chr18 32355741 32355756 -54321792 + L1PA13 LINE L1 5089 5102 -1130 198 0 0 0 chr18 32355756 32355778 -54321770 + (TAA)n Simple_repeat Simple_repeat 3 24 0 5690 108 30 14 chr18 32355778 32356879 -54320669 + L1PA13 LINE L1 5102 6221 -11 2199 96 3 0 chr18 32356903 32357194 -54320354 - AluSx SINE Alu -20 292 1 383 250 46 0 chr18 32357205 32357313 -54320235 + L1ME1 LINE L1 4687 4799 -1416 344 150 33 0 chr18 32357313 32357373 -54320175 - MER45B DNA AcHobo 0 1040 979 * 1385 217 29 7 chr18 32357371 32357647 -54319901 - MER45B DNA AcHobo -758 282 1 2450 225 48 70 chr18 32357647 32358071 -54319477 + L1ME1 LINE L1 4792 5223 -1012 1358 277 42 13 chr18 32358071 32358519 -54319029 - LTR40b LTR ERVL -1 461 1 2450 225 48 70 chr18 32358519 32358601 -54318947 + L1ME1 LINE L1 5223 5305 -930 314 23 0 23 chr18 32358601 32358645 -54318903 + (TA)n Simple_repeat Simple_repeat 1 43 0 2450 225 48 70 chr18 32358645 32358706 -54318842 + L1ME1 LINE L1 5305 5366 -869 1993 55 0 0 chr18 32358706 32358941 -54318607 - AluY SINE Alu -12 299 65 2450 225 48 70 chr18 32358941 32359837 -54317711 + L1ME1 LINE L1 5366 6231 -4 4507 219 53 22 chr18 32359863 32362018 -54315530 + L1MD1 LINE L1 3935 6234 -8 321 281 62 57 chr18 32362117 32362327 -54315221 + HAL1b LINE L1 607 817 -531 26 30 0 0 chr18 32362327 32362360 -54315188 + AT_rich Low_complexity Low_complexity 1 33 0 1474 137 91 137 chr18 32364729 32365189 -54312359 + L1MA9 LINE L1 5834 6272 -40 341 141 14 0 chr18 32365226 32365297 -54312251 + (TA)n Simple_repeat Simple_repeat 2 73 0 330 156 78 0 chr18 32365671 32365735 -54311813 - MIR SINE MIR -74 188 120 2165 87 0 0 chr18 32365854 32366131 -54311417 - AluSx SINE Alu -12 300 24 2094 117 3 0 chr18 32367553 32367862 -54309686 + AluSx SINE Alu 1 310 0 2494 30 7 3 chr18 32369194 32369490 -54308058 + AluY SINE Alu 1 297 -14 192 283 0 19 chr18 32369749 32369802 -54307746 - MIR SINE MIR -152 110 59 285 204 21 75 chr18 32370171 32370264 -54307284 - L2 LINE L2 0 3313 3226 1009 316 92 2 chr18 32371979 32372390 -54305158 - LTR33 LTR ERVL -73 448 1 2479 212 22 51 chr18 32373346 32373968 -54303580 - MER77 LTR ERV1 0 605 2 26 64 0 0 chr18 32374461 32374508 -54303040 + AT_rich Low_complexity Low_complexity 1 47 0 23 78 0 0 chr18 32374808 32374859 -54302689 + AT_rich Low_complexity Low_complexity 1 51 0 752 249 107 0 chr18 32376340 32376565 -54300983 - MER58B DNA MER1_type 0 341 93 309 181 0 14 chr18 32376981 32377053 -54300495 - L1MA10 LINE L1 -2 6332 6262 2458 223 57 16 chr18 32377077 32377421 -54300127 - L1MB7 LINE L1 -6 6178 5850 15467 150 24 21 chr18 32377421 32377815 -54299733 - Tigger4(Zombi) DNA MER2_type -2 2729 2338 2163 95 14 0 chr18 32377815 32378110 -54299438 + AluSp SINE Alu 1 299 -14 15467 150 24 21 chr18 32378110 32378679 -54298869 - Tigger4(Zombi) DNA MER2_type -393 2338 1772 1469 179 27 36 chr18 32378679 32378980 -54298568 + AluJb SINE Alu 3 300 -12 15467 150 24 21 chr18 32378980 32380737 -54296811 - Tigger4(Zombi) DNA MER2_type -959 1772 1 2458 223 57 16 chr18 32380737 32381039 -54296509 - L1MB7 LINE L1 -334 5850 5505 298 356 29 0 chr18 32381419 32381523 -54296025 + MER45A DNA AcHobo 1 107 -71 9725 210 38 15 chr18 32381852 32381986 -54295562 - L1MA9 LINE L1 0 7272 7143 222 62 0 0 chr18 32381986 32382018 -54295530 + (TG)n Simple_repeat Simple_repeat 1 32 0 9725 210 38 15 chr18 32382018 32384900 -54292648 - L1MA9 LINE L1 -129 7143 4122 2231 99 0 3 chr18 32384900 32385204 -54292344 + AluY SINE Alu 1 303 -8 9725 210 38 15 chr18 32385204 32386554 -54290994 - L1MA9 LINE L1 -3150 4122 2804 1094 176 5 0 chr18 32386650 32386838 -54290710 - AluJo SINE Alu -5 307 119 2715 259 111 9 chr18 32386929 32387121 -54290427 - L1MA9 LINE L1 -4177 2930 2759 180 0 0 0 chr18 32387121 32387141 -54290407 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2715 259 111 9 chr18 32387141 32388570 -54288978 - L1MA9 LINE L1 -4348 2759 1134 1410 244 6 6 chr18 32388576 32388887 -54288661 - L1MA9 LINE L1 -6714 316 6 306 309 0 0 chr18 32388900 32388984 -54288564 + MER45A DNA AcHobo 95 178 0 23 0 0 0 chr18 32390327 32390350 -54287198 + AT_rich Low_complexity Low_complexity 1 23 0 189 188 0 0 chr18 32390560 32390592 -54286956 + MER5B DNA MER1_type 6 37 -141 344 250 27 45 chr18 32390634 32390746 -54286802 - MER5B DNA MER1_type -48 130 21 421 218 0 0 chr18 32391813 32391900 -54285648 + MER89 LTR ERV1 1 87 -472 853 192 35 0 chr18 32391949 32392121 -54285427 + MER89 LTR ERV1 380 557 -2 204 182 0 0 chr18 32392943 32392987 -54284561 + (TG)n Simple_repeat Simple_repeat 2 45 0 183 222 0 0 chr18 32393057 32393102 -54284446 + (CA)n Simple_repeat Simple_repeat 1 45 0 706 142 28 14 chr18 32393102 32393243 -54284305 + L1MA9 LINE L1 6170 6312 0 32 0 0 0 chr18 32393243 32393275 -54284273 + AT_rich Low_complexity Low_complexity 1 32 0 1124 226 177 46 chr18 32393461 32393895 -54283653 + MLT1F LTR MaLR 1 491 -51 210 135 52 31 chr18 32393922 32394018 -54283530 + (TTTAA)n Simple_repeat Simple_repeat 3 100 0 1621 79 4 0 chr18 32394022 32394250 -54283298 - L1MA2 LINE L1 0 6304 6076 267 125 0 0 chr18 32394252 32394292 -54283256 + MLT1F LTR MaLR 554 593 0 251 326 34 27 chr18 32394344 32394491 -54283057 + MIR SINE MIR 102 249 -13 2138 117 27 0 chr18 32394540 32394840 -54282708 + AluSx SINE Alu 1 308 -4 199 344 0 0 chr18 32396601 32396662 -54280886 + L2 LINE L2 2595 2655 -659 1751 229 28 25 chr18 32396667 32397104 -54280444 + MLT1D LTR MaLR 3 440 -65 21 82 0 0 chr18 32397105 32397154 -54280394 + AT_rich Low_complexity Low_complexity 1 49 0 290 218 0 0 chr18 32397166 32397244 -54280304 + MLT1D LTR MaLR 577 654 0 1802 207 144 37 chr18 32397317 32397906 -54279642 - MLT1E1 LTR MaLR -2 652 1 201 39 0 0 chr18 32398139 32398165 -54279383 + (TG)n Simple_repeat Simple_repeat 2 27 0 1467 196 77 50 chr18 32398623 32398725 -54278823 - LTR52 LTR ERVL -8 413 315 2334 43 7 0 chr18 32398725 32399054 -54278494 + AluY SINE Alu 1 331 0 1467 196 77 50 chr18 32399054 32399352 -54278196 - LTR52 LTR ERVL -106 315 1 289 293 43 104 chr18 32399508 32399672 -54277876 + L2 LINE L2 3119 3272 0 633 198 57 64 chr18 32400416 32400573 -54276975 - MLT1C LTR MaLR -207 183 28 1512 219 91 39 chr18 32400795 32401237 -54276311 - MLT1C LTR MaLR -2 465 1 1260 183 55 1 chr18 32402988 32403414 -54274134 + MLT1D LTR MaLR 1 505 0 282 333 129 20 chr18 32403443 32403644 -54273904 + MIR SINE MIR 2 224 -38 1585 207 82 58 chr18 32404905 32405403 -54272145 - MLT2B1 LTR ERVL -10 510 1 209 308 199 31 chr18 32405408 32405638 -54271910 + L2 LINE L2 2499 2788 -526 1731 175 10 3 chr18 32405638 32405929 -54271619 + AluJb SINE Alu 3 295 -17 209 308 199 31 chr18 32405929 32405984 -54271564 + L2 LINE L2 2788 2832 -482 623 213 128 0 chr18 32406001 32406189 -54271359 - MER33 DNA MER1_type -112 212 1 3377 140 9 26 chr18 32406256 32406792 -54270756 + MER1A DNA MER1_type 1 527 0 693 222 300 7 chr18 32408565 32408874 -54268674 - MER39 LTR ERV1 0 707 182 252 234 43 32 chr18 32408909 32409003 -54268545 - LTR48B LTR ERV1 -549 95 1 387 300 100 0 chr18 32409021 32409131 -54268417 - MER5B DNA MER1_type -53 125 5 223 186 0 0 chr18 32409534 32409577 -54267971 + A-rich Low_complexity Low_complexity 1 43 0 545 333 137 14 chr18 32409743 32410188 -54267360 + L2 LINE L2 1873 2372 -942 545 223 0 0 chr18 32410296 32410399 -54267149 + MER5A DNA MER1_type 11 113 -76 230 329 91 28 chr18 32410328 32410471 -54267077 - MER5A DNA MER1_type -31 158 7 * 420 280 23 34 chr18 32410530 32410705 -54266843 - MER5B DNA MER1_type -4 174 2 218 286 0 0 chr18 32411978 32412020 -54265528 - L2 LINE L2 -12 3260 3219 593 164 17 0 chr18 32412089 32412205 -54265343 + L1PB4 LINE L1 6037 6154 -2 290 382 24 29 chr18 32412269 32412439 -54265109 - MIR SINE MIR -75 187 19 300 27 0 0 chr18 32413165 32413202 -54264346 + (CA)n Simple_repeat Simple_repeat 2 38 0 2287 99 3 16 chr18 32413534 32413846 -54263702 - AluSx SINE Alu -4 308 1 25 0 0 0 chr18 32414419 32414444 -54263104 + AT_rich Low_complexity Low_complexity 1 25 0 398 53 18 0 chr18 32418320 32418377 -54259171 + (CA)n Simple_repeat Simple_repeat 1 58 0 2349 88 3 3 chr18 32418508 32418813 -54258735 - AluSg SINE Alu -5 305 1 1619 143 33 62 chr18 32418815 32419122 -54258426 - AluJo SINE Alu -14 298 1 193 387 27 0 chr18 32419579 32419654 -54257894 - L2 LINE L2 -287 2985 2909 1426 261 122 42 chr18 32420832 32421373 -54256175 - MLT1E LTR MaLR -9 584 1 33 43 0 0 chr18 32423521 32423568 -54253980 + AT_rich Low_complexity Low_complexity 1 47 0 3390 43 9 5 chr18 32423679 32424100 -54253448 + L1PA5 LINE L1 5729 6151 -3 324 265 10 10 chr18 32424959 32425057 -54252491 + HAL1b LINE L1 1244 1341 -7 491 294 101 52 chr18 32426083 32426754 -54250794 + L1M4 LINE L1 4 946 -5700 266 288 0 0 chr18 32426754 32426820 -54250728 + L1M4 LINE L1 1383 1448 -5117 1010 238 14 21 chr18 32426895 32427296 -54250252 + L1M4 LINE L1 823 1225 -5325 249 33 0 0 chr18 32427517 32427547 -54250001 + (A)n Simple_repeat Simple_repeat 1 30 0 789 202 49 0 chr18 32427604 32427807 -54249741 - L1M4 LINE L1 -1394 4752 4540 348 24 0 0 chr18 32427973 32428014 -54249534 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2034 118 7 7 chr18 32428017 32428304 -54249244 - AluSx SINE Alu -23 289 3 184 222 0 0 chr18 32429241 32429277 -54248271 - MIR SINE MIR -179 83 48 2061 18 0 0 chr18 32429321 32429550 -54247998 + AluYb8 SINE Alu 82 310 -8 1517 127 0 26 chr18 32429902 32430130 -54247418 + AluSg/x SINE Alu 86 307 -3 260 270 16 0 chr18 32430136 32430199 -54247349 + GA-rich Low_complexity Low_complexity 2 65 0 1127 283 56 89 chr18 32430240 32430321 -54247227 + L2 LINE L2 2714 2796 -517 1776 167 7 3 chr18 32430321 32430630 -54246918 - AluJo SINE Alu 0 310 1 1127 283 56 89 chr18 32430630 32431186 -54246362 + L2 LINE L2 2796 3313 0 271 209 68 0 chr18 32431208 32431276 -54246272 - MIR SINE MIR -62 146 75 723 213 0 0 chr18 32431356 32431689 -54245859 + (TG)n Simple_repeat Simple_repeat 1 333 0 21 36 0 0 chr18 32431914 32431942 -54245606 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr18 32434462 32434491 -54243057 + AT_rich Low_complexity Low_complexity 1 29 0 30 27 0 0 chr18 32434508 32434545 -54243003 + AT_rich Low_complexity Low_complexity 1 37 0 1469 144 39 8 chr18 32434926 32435182 -54242366 + L1MB5 LINE L1 5875 6138 -36 790 31 21 0 chr18 32435434 32435531 -54242017 + L1PA10 LINE L1 6066 6164 -4 944 218 65 9 chr18 32435705 32435934 -54241614 - MIR SINE MIR -11 251 10 246 272 0 0 chr18 32435940 32436024 -54241524 - L1MC/D LINE L1 -605 5754 5688 2146 190 47 2 chr18 32437007 32437434 -54240114 - MER65C LTR ERV1 -15 446 1 2424 48 0 3 chr18 32437484 32437775 -54239773 + AluY SINE Alu 1 290 -21 21 104 0 0 chr18 32439972 32440049 -54237499 + AT_rich Low_complexity Low_complexity 1 77 0 382 309 159 36 chr18 32440289 32440509 -54237039 + MIR SINE MIR 6 252 -10 398 322 7 13 chr18 32441136 32441285 -54236263 + MER5B DNA MER1_type 1 148 -30 1913 172 0 0 chr18 32441287 32441595 -54235953 + AluJb SINE Alu 2 309 -3 1073 127 35 0 chr18 32441752 32441949 -54235599 + L1MA7 LINE L1 6078 6281 -10 24 85 0 0 chr18 32442179 32442238 -54235310 + AT_rich Low_complexity Low_complexity 1 59 0 264 242 16 0 chr18 32442746 32442808 -54234740 + L2 LINE L2 3191 3253 -60 1936 158 0 3 chr18 32442935 32443227 -54234321 + AluSx SINE Alu 9 299 -13 25 0 0 0 chr18 32443571 32443596 -54233952 + AT_rich Low_complexity Low_complexity 1 25 0 37 23 0 0 chr18 32444651 32444695 -54232853 + AT_rich Low_complexity Low_complexity 1 44 0 1710 143 54 4 chr18 32444759 32445038 -54232510 + AluSx SINE Alu 2 294 -18 316 320 0 0 chr18 32446000 32446100 -54231448 + U13 snRNA snRNA 4 103 -1 399 41 0 0 chr18 32446856 32446905 -54230643 + (CA)n Simple_repeat Simple_repeat 2 50 0 676 301 74 31 chr18 32447466 32447791 -54229757 + LTR16A LTR ERVL 112 450 0 257 0 0 29 chr18 32447913 32447947 -54229601 + (TG)n Simple_repeat Simple_repeat 2 34 0 2313 104 3 0 chr18 32449051 32449358 -54228190 + AluSp SINE Alu 5 312 -1 356 325 73 40 chr18 32450090 32450620 -54226928 + L1MEc LINE L1 1249 1834 -742 2260 109 0 6 chr18 32452720 32453031 -54224517 - AluSx SINE Alu -3 309 1 26 64 0 0 chr18 32453045 32453092 -54224456 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr18 32453481 32453502 -54224046 + AT_rich Low_complexity Low_complexity 1 21 0 2123 133 143 8 chr18 32453969 32454346 -54223202 + MSTA LTR MaLR 1 428 0 1875 66 0 0 chr18 32456106 32456333 -54221215 - AluY SINE Alu -84 227 1 456 247 0 0 chr18 32456601 32456690 -54220858 - L2 LINE L2 0 3272 3184 282 286 54 18 chr18 32456945 32457057 -54220491 + L2 LINE L2 2013 2128 -1186 2115 119 3 22 chr18 32457065 32457376 -54220172 - AluSx SINE Alu -7 305 1 409 391 61 30 chr18 32457423 32457784 -54219764 + L2 LINE L2 2899 3270 -2 411 306 98 41 chr18 32457991 32458840 -54218708 + L1ME LINE L1 4767 5660 -502 22 0 0 0 chr18 32459095 32459117 -54218431 + AT_rich Low_complexity Low_complexity 1 22 0 235 250 0 47 chr18 32461289 32461353 -54216195 + MIR SINE MIR 197 257 -5 1121 292 148 31 chr18 32461544 32462151 -54215397 + L2 LINE L2 22 699 -2615 1247 227 65 59 chr18 32462156 32462416 -54215132 + MLT1D LTR MaLR 5 155 -350 2405 39 4 0 chr18 32462416 32462718 -54214830 + AluY SINE Alu 1 303 0 1247 227 65 59 chr18 32462718 32463071 -54214477 + MLT1D LTR MaLR 155 505 0 5197 279 96 34 chr18 32463071 32465304 -54212244 + L2 LINE L2 718 3078 -235 614 108 0 18 chr18 32466434 32466545 -54211003 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 423 235 162 0 chr18 32466823 32466959 -54210589 - L2 LINE L2 -921 2393 2236 1976 143 0 0 chr18 32467094 32467561 -54209987 + AluSx SINE Alu 1 467 0 488 238 14 0 chr18 32467968 32468187 -54209361 + CT-rich Low_complexity Low_complexity 1 222 0 182 317 191 35 chr18 32468399 32468629 -54208919 - L2 LINE L2 -556 2758 2493 1160 101 0 96 chr18 32468843 32469038 -54208510 - L1PB1 LINE L1 -3 6148 5975 2231 113 0 3 chr18 32469038 32469348 -54208200 - AluSx SINE Alu -3 309 1 1160 101 0 96 chr18 32469348 32469370 -54208178 - L1PB1 LINE L1 -176 5975 5952 227 376 112 0 chr18 32470004 32470174 -54207374 + L2 LINE L2 2308 2496 -818 314 368 80 5 chr18 32470633 32470834 -54206714 - L2 LINE L2 -887 2427 2212 753 145 36 0 chr18 32470898 32471036 -54206512 - L1MA7 LINE L1 0 6291 6149 3296 187 34 14 chr18 32471072 32471174 -54206374 - L1MA9 LINE L1 -38 6274 6175 333 47 0 0 chr18 32471174 32471217 -54206331 + (TG)n Simple_repeat Simple_repeat 1 43 0 3296 187 34 14 chr18 32471217 32471830 -54205718 - L1MA9 LINE L1 -137 6175 5545 317 243 34 81 chr18 32472044 32472112 -54205436 + MIR SINE MIR 112 182 -80 2096 119 0 42 chr18 32472112 32472423 -54205125 - AluSx SINE Alu -14 298 1 317 243 34 81 chr18 32472423 32472502 -54205046 + MIR SINE MIR 182 252 -10 277 229 302 10 chr18 32472499 32472595 -54204953 - L2 LINE L2 -5 3308 3185 * 528 250 71 27 chr18 32472909 32473093 -54204455 - Charlie8 DNA MER1_type -2163 254 63 2067 155 0 0 chr18 32473214 32473523 -54204025 - AluSx SINE Alu -3 309 1 475 252 23 67 chr18 32473769 32473933 -54203615 + MLT1J LTR MaLR 54 245 -266 2135 109 0 3 chr18 32473933 32474260 -54203288 - AluSq SINE Alu 0 326 1 475 252 23 67 chr18 32474260 32474321 -54203227 + MLT1J LTR MaLR 245 307 -204 2005 107 0 35 chr18 32474447 32474784 -54202764 + AluSc SINE Alu 1 327 0 24 0 0 0 chr18 32475327 32475351 -54202197 + AT_rich Low_complexity Low_complexity 1 24 0 253 278 127 40 chr18 32475495 32475621 -54201927 - MIR3 SINE MIR -67 141 5 1442 185 50 25 chr18 32475628 32475909 -54201639 - AluJo SINE Alu -15 297 10 2132 102 0 11 chr18 32476084 32476414 -54201134 - AluSc SINE Alu 0 327 1 699 268 104 0 chr18 32476541 32476761 -54200787 - MLT1J LTR MaLR -12 499 257 555 250 163 6 chr18 32476911 32477071 -54200477 - MER5A DNA MER1_type -1 188 4 810 265 0 11 chr18 32477109 32477294 -54200254 - MER5A DNA MER1_type -6 183 1 27 0 0 0 chr18 32479327 32479354 -54198194 + AT_rich Low_complexity Low_complexity 1 27 0 1529 66 10 5 chr18 32479866 32480062 -54197486 - AluSq SINE Alu -13 300 104 21 0 0 0 chr18 32481361 32481382 -54196166 + AT_rich Low_complexity Low_complexity 1 21 0 229 227 30 15 chr18 32482544 32482610 -54194938 + MIR SINE MIR 88 154 -108 1437 159 41 6 chr18 32482617 32483026 -54194522 + MLT1C LTR MaLR 1 455 -12 337 230 23 23 chr18 32483036 32483123 -54194425 + MIR SINE MIR 175 261 -1 257 167 0 33 chr18 32483853 32483913 -54193635 + GA-rich Low_complexity Low_complexity 4 61 0 399 323 40 0 chr18 32484201 32484325 -54193223 - MIR3 SINE MIR -28 180 52 258 301 92 63 chr18 32485833 32486039 -54191509 + L2 LINE L2 2903 3114 -158 21 36 0 0 chr18 32486549 32486577 -54190971 + AT_rich Low_complexity Low_complexity 1 28 0 1560 115 18 0 chr18 32487212 32487438 -54190110 + MER30 DNA MER1_type 1 230 0 406 337 102 40 chr18 32487627 32487930 -54189618 - L3 LINE CR1 -3 1574 1253 396 0 0 0 chr18 32488596 32488640 -54188908 + (TG)n Simple_repeat Simple_repeat 1 44 0 224 229 9 38 chr18 32489635 32489740 -54187808 + (TA)n Simple_repeat Simple_repeat 1 102 0 2536 96 6 0 chr18 32491442 32491795 -54185753 + THE1A LTR MaLR 1 355 0 200 297 0 0 chr18 32491845 32491909 -54185639 + A-rich Low_complexity Low_complexity 1 64 0 263 245 143 87 chr18 32493423 32493619 -54183929 + MIR SINE MIR 19 225 -37 191 213 0 16 chr18 32493731 32493792 -54183756 + (TA)n Simple_repeat Simple_repeat 2 61 0 216 0 0 0 chr18 32494007 32494031 -54183517 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2031 142 7 0 chr18 32494530 32494840 -54182708 - AluSx SINE Alu 0 312 1 3070 148 17 84 chr18 32494949 32495558 -54181990 + L1MC1 LINE L1 5698 6260 -73 2425 57 0 10 chr18 32495558 32495872 -54181676 - AluY SINE Alu 0 311 1 3070 148 17 84 chr18 32495872 32495926 -54181622 + L1MC1 LINE L1 6260 6316 -17 21 36 0 0 chr18 32495970 32495998 -54181550 + AT_rich Low_complexity Low_complexity 1 28 0 3913 142 5 0 chr18 32496725 32497351 -54180197 - L1PA16 LINE L1 -16 6150 5522 24 32 0 0 chr18 32497963 32497994 -54179554 + AT_rich Low_complexity Low_complexity 1 31 0 216 0 0 0 chr18 32498594 32498618 -54178930 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 214 303 15 15 chr18 32499852 32499918 -54177630 + L2 LINE L2 3203 3268 -4 370 174 12 12 chr18 32500635 32500721 -54176827 + (CCA)n Simple_repeat Simple_repeat 3 88 0 707 215 6 0 chr18 32500752 32500929 -54176619 + (CCA)n Simple_repeat Simple_repeat 3 180 0 248 250 31 52 chr18 32501361 32501457 -54176091 - L3b LINE CR1 -209 1374 1281 2148 123 0 0 chr18 32502189 32502491 -54175057 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr18 32502727 32502762 -54174786 + AT_rich Low_complexity Low_complexity 1 35 0 550 203 152 25 chr18 32504616 32504774 -54172774 + MER5B DNA MER1_type 1 178 0 1777 134 0 0 chr18 32505656 32505909 -54171639 + AluSq SINE Alu 1 253 -60 22 0 0 0 chr18 32508040 32508062 -54169486 + AT_rich Low_complexity Low_complexity 1 22 0 2034 134 0 0 chr18 32508306 32508598 -54168950 + AluSg SINE Alu 12 303 -7 2725 20 0 0 chr18 32509356 32509661 -54167887 - AluYb8 SINE Alu -13 305 1 21 0 0 0 chr18 32510638 32510659 -54166889 + AT_rich Low_complexity Low_complexity 1 21 0 294 275 0 22 chr18 32511120 32511211 -54166337 - L1MC4 LINE L1 -1339 6703 6615 1123 111 66 216 chr18 32511211 32511645 -54165903 - Tigger3(Golem) DNA MER2_type 0 3029 1 243 103 0 0 chr18 32511661 32511700 -54165848 + (TA)n Simple_repeat Simple_repeat 1 39 0 237 65 0 0 chr18 32514460 32514491 -54163057 + (TAGA)n Simple_repeat Simple_repeat 1 31 0 21 36 0 0 chr18 32514941 32514969 -54162579 + AT_rich Low_complexity Low_complexity 1 28 0 1128 209 126 67 chr18 32515063 32515437 -54162111 - MSTD LTR MaLR 0 396 1 1020 244 26 4 chr18 32515520 32515750 -54161798 + MIR SINE MIR 12 246 -16 29 0 0 0 chr18 32516300 32516329 -54161219 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr18 32516636 32516659 -54160889 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 32516821 32516842 -54160706 + AT_rich Low_complexity Low_complexity 1 21 0 569 253 123 84 chr18 32516912 32517220 -54160328 - MLT1K LTR MaLR -8 580 261 324 280 68 25 chr18 32517423 32517541 -54160007 - L2 LINE L2 -2 3311 3189 518 308 99 27 chr18 32517869 32518361 -54159187 - L1ME4a LINE L1 -211 5910 5382 2037 99 10 30 chr18 32518402 32518706 -54158842 - AluSq SINE Alu -15 298 1 1212 161 5 10 chr18 32519919 32520118 -54157430 + AluJb SINE Alu 1 198 -114 2241 57 7 0 chr18 32520218 32520527 -54157021 + AluY SINE Alu 2 312 0 574 175 10 0 chr18 32520527 32520630 -54156918 + AluJb SINE Alu 194 297 -15 249 33 0 0 chr18 32520788 32520818 -54156730 + (GA)n Simple_repeat Simple_repeat 2 31 0 201 265 0 0 chr18 32521218 32521285 -54156263 + A-rich Low_complexity Low_complexity 1 67 0 213 259 19 0 chr18 32521288 32521342 -54156206 - L2 LINE L2 -4 3309 3255 24 67 0 0 chr18 32521873 32521918 -54155630 + AT_rich Low_complexity Low_complexity 1 45 0 305 286 143 17 chr18 32521941 32522060 -54155488 - MIR3 SINE MIR -48 160 27 242 356 10 20 chr18 32522959 32523060 -54154488 - MIR SINE MIR -131 131 32 487 278 124 41 chr18 32523131 32523325 -54154223 - MER63A DNA MER1_type 0 210 1 189 0 0 0 chr18 32523420 32523441 -54154107 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 272 27 27 0 chr18 32523440 32523477 -54154071 + (TA)n Simple_repeat Simple_repeat 1 38 0 237 232 14 0 chr18 32523645 32523714 -54153834 + (TTG)n Simple_repeat Simple_repeat 2 71 0 909 159 6 74 chr18 32523883 32524059 -54153489 - FRAM SINE Alu -3 173 10 186 133 0 0 chr18 32524653 32524683 -54152865 + (CA)n Simple_repeat Simple_repeat 2 31 0 609 244 22 33 chr18 32524998 32525178 -54152370 + MER5B DNA MER1_type 1 178 0 800 130 82 0 chr18 32525547 32525693 -54151855 - L1MA4 LINE L1 -6 6294 6137 1427 201 114 69 chr18 32526182 32526629 -54150919 - MLT1C LTR MaLR 0 467 1 29 0 0 0 chr18 32526927 32526956 -54150592 + AT_rich Low_complexity Low_complexity 1 29 0 590 304 74 10 chr18 32527046 32527355 -54150193 + L2 LINE L2 2950 3278 -35 225 0 0 0 chr18 32527394 32527419 -54150129 + (TAA)n Simple_repeat Simple_repeat 3 27 0 2285 113 30 25 chr18 32527650 32528012 -54149536 + THE1B LTR MaLR 1 364 0 1139 188 172 0 chr18 32528059 32528309 -54149239 + AluJo SINE Alu 1 293 -9 482 226 73 37 chr18 32528834 32528998 -54148550 - HAL1 LINE L1 -111 2396 2227 1646 120 0 54 chr18 32529140 32529427 -54148121 - AluSq SINE Alu 0 312 40 408 284 16 0 chr18 32529437 32529564 -54147984 - HAL1 LINE L1 -604 1903 1775 635 266 17 6 chr18 32529601 32529774 -54147774 + L1MD3 LINE L1 6705 6879 -1116 277 211 92 0 chr18 32529825 32529901 -54147647 - L1MD3 LINE L1 -266 7729 7647 1853 256 61 46 chr18 32529904 32531016 -54146532 + L1MC4a LINE L1 6830 7986 -9 185 239 0 43 chr18 32532163 32532209 -54145339 - L2 LINE L2 -833 2481 2438 1982 162 44 56 chr18 32532919 32533350 -54144198 + MSTB LTR MaLR 1 426 0 3464 127 4 16 chr18 32533484 32534043 -54143505 - L1PA16 LINE L1 -9 6157 5606 312 269 9 37 chr18 32534108 32534216 -54143332 - MIR SINE MIR 0 262 158 372 282 94 34 chr18 32534313 32534462 -54143086 - MIR SINE MIR -90 172 15 770 238 50 10 chr18 32535030 32535232 -54142316 - MIR SINE MIR -2 260 51 468 255 49 54 chr18 32535557 32535761 -54141787 + LTR16C LTR ERVL 287 489 -2 1409 195 124 26 chr18 32535839 32536218 -54141330 - MLT2C2 LTR ERVL -48 416 1 387 292 0 0 chr18 32536975 32537071 -54140477 + ERVL LTR ERVL 1727 1822 -3832 719 339 54 28 chr18 32537162 32537628 -54139920 + ERVL LTR ERVL 3494 3971 -1793 302 266 98 52 chr18 32537980 32538153 -54139395 - L1M4 LINE L1 -1595 4551 4371 486 347 29 29 chr18 32538155 32538328 -54139220 + MER91A DNA MER1_type 1 173 -23 28 48 0 0 chr18 32538737 32538779 -54138769 + AT_rich Low_complexity Low_complexity 1 42 0 340 313 55 25 chr18 32538900 32539063 -54138485 - L1M4 LINE L1 -1945 4201 4034 582 261 11 97 chr18 32539361 32539629 -54137919 + MIR SINE MIR 13 257 -5 2306 100 3 7 chr18 32540382 32540692 -54136856 + AluSp SINE Alu 5 313 0 356 325 73 40 chr18 32541424 32541954 -54135594 + L1MEc LINE L1 1249 1834 -742 2321 107 0 3 chr18 32544054 32544364 -54133184 - AluSx SINE Alu -3 309 1 26 64 0 0 chr18 32544378 32544425 -54133123 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr18 32544814 32544835 -54132713 + AT_rich Low_complexity Low_complexity 1 21 0 2087 127 143 13 chr18 32545302 32545681 -54131867 + MSTA LTR MaLR 1 428 0 1803 88 0 0 chr18 32547441 32547669 -54129879 - AluSq SINE Alu -85 228 1 849 103 0 0 chr18 32548033 32548150 -54129398 - AluSg/x SINE Alu 0 309 193 323 317 76 25 chr18 32548696 32548853 -54128695 + MIR SINE MIR 1 143 -65 2273 198 56 36 chr18 32549415 32550190 -54127358 + Charlie1 DNA MER1_type 1720 2552 -209 412 209 58 12 chr18 32550228 32550400 -54127148 + Charlie1 DNA MER1_type 2545 2724 -37 249 406 36 0 chr18 32550897 32551035 -54126513 - L2 LINE L2 -923 2391 2249 538 269 104 10 chr18 32552179 32552372 -54125176 - MIR SINE MIR -10 252 42 2148 129 0 3 chr18 32553693 32553996 -54123552 + AluSx SINE Alu 1 302 -10 28 0 0 0 chr18 32554514 32554542 -54123006 + AT_rich Low_complexity Low_complexity 1 28 0 240 192 0 19 chr18 32555239 32555254 -54122294 + GA-rich Low_complexity Low_complexity 2 16 -36 734 199 8 8 chr18 32555254 32555385 -54122163 + FLAM_C SINE Alu 2 132 -1 240 192 0 19 chr18 32555385 32555421 -54122127 + GA-rich Low_complexity Low_complexity 16 52 0 249 353 58 32 chr18 32556643 32556833 -54120715 - L3b LINE CR1 -199 1384 1190 2604 103 16 3 chr18 32557955 32558332 -54119216 - L1PA10 LINE L1 -10 6158 5777 207 275 30 12 chr18 32558508 32558675 -54118873 + (TA)n Simple_repeat Simple_repeat 2 171 0 23 33 0 0 chr18 32558683 32558713 -54118835 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr18 32559492 32559514 -54118034 + AT_rich Low_complexity Low_complexity 1 22 0 975 291 172 18 chr18 32559733 32560410 -54117138 - L2 LINE L2 0 3313 2543 258 319 194 40 chr18 32560453 32560979 -54116569 - L2 LINE L2 0 3272 2667 345 310 76 12 chr18 32560983 32561154 -54116394 + L1MC/D LINE L1 4 185 -5934 265 315 19 37 chr18 32561296 32561404 -54116144 + L1MC/D LINE L1 454 559 -5560 590 332 122 18 chr18 32561414 32561847 -54115701 + L1MC/D LINE L1 3872 4258 -1871 2091 59 0 26 chr18 32561847 32562120 -54115428 + AluY SINE Alu 35 300 -11 590 332 122 18 chr18 32562120 32562502 -54115046 + L1MC/D LINE L1 4258 4774 -1355 553 239 184 20 chr18 32562545 32562838 -54114710 - L1MC/D LINE L1 -2205 5603 5263 496 308 30 12 chr18 32563230 32563276 -54114272 + L1MC/D LINE L1 5538 5582 -2209 1994 143 0 3 chr18 32563276 32563569 -54113979 - AluJb SINE Alu -20 292 1 496 308 30 12 chr18 32563569 32563691 -54113857 + L1MC/D LINE L1 5582 5709 -2082 328 333 168 25 chr18 32563725 32564108 -54113440 - L2 LINE L2 -782 2532 2205 1182 163 31 4 chr18 32564108 32564335 -54113213 + L1MB1 LINE L1 5936 6168 0 328 333 168 25 chr18 32564335 32564558 -54112990 - L2 LINE L2 -1109 2205 1839 887 169 7 13 chr18 32564695 32564849 -54112699 - AluJb SINE Alu -25 287 135 218 214 0 48 chr18 32566329 32566413 -54111135 + (CCCCG)n Simple_repeat Simple_repeat 5 84 0 180 111 0 0 chr18 32567570 32567597 -54109951 + (CATA)n Simple_repeat Simple_repeat 2 28 0 22 0 0 0 chr18 32568191 32568213 -54109335 + AT_rich Low_complexity Low_complexity 1 22 0 336 282 111 8 chr18 32569644 32569761 -54107787 + MIR SINE MIR 133 261 -1 2458 56 3 3 chr18 32570213 32570515 -54107033 - AluY SINE Alu -9 302 1 456 247 0 0 chr18 32570783 32570872 -54106676 - L2 LINE L2 0 3272 3184 456 247 0 0 chr18 32571154 32571243 -54106305 + L2 LINE L2 3184 3272 0 189 322 50 33 chr18 32623115 32623236 -54054312 + L2 LINE L2 2116 2238 -1076 1634 163 19 3 chr18 32623459 32623784 -54053764 - L1P LINE L1 -761 5385 5056 2499 87 127 12 chr18 32623786 32624188 -54053360 - LTR7 LTR ERV1 -2 448 1 3306 102 10 52 chr18 32624188 32624769 -54052779 - HERVH LTR ERV1 0 7713 7157 1356 174 15 0 chr18 32624762 32625026 -54052522 - HERVH LTR ERV1 -1697 6016 5749 * 9397 123 7 17 chr18 32625023 32627902 -54049646 - HERVH LTR ERV1 -1866 5225 1264 774 159 0 21 chr18 32628011 32628156 -54049392 - THE1C LTR MaLR -233 142 1 1482 94 13 8 chr18 32628162 32628397 -54049151 - THE1C-int LTR MaLR -5 1575 1340 * 4497 199 59 14 chr18 32628384 32628917 -54048631 + L1M3 LINE L1 4108 4615 -1553 2436 94 0 3 chr18 32628917 32629225 -54048323 - AluSc SINE Alu -2 307 1 4497 199 59 14 chr18 32629225 32629972 -54047576 + L1M3 LINE L1 4615 5440 -728 1292 162 55 4 chr18 32629985 32630238 -54047310 + L1P5 LINE L1 2 267 -6596 11346 134 16 5 chr18 32630239 32632143 -54045405 + L1P5 LINE L1 347 2271 -4592 435 76 15 0 chr18 32632143 32632209 -54045339 + MER41A LTR ERV1 400 466 -88 598 84 11 11 chr18 32632220 32632315 -54045233 + (GGA)n Simple_repeat Simple_repeat 2 96 0 13401 201 10 21 chr18 32632317 32633748 -54043800 + L1P5 LINE L1 2338 3783 -3084 1973 164 3 0 chr18 32633748 32634047 -54043501 + AluSx SINE Alu 1 300 -12 13401 201 10 21 chr18 32634047 32635269 -54042279 + L1P5 LINE L1 3783 5016 -1851 2210 138 3 0 chr18 32635269 32635581 -54041967 + AluSq SINE Alu 1 313 0 13401 201 10 21 chr18 32635581 32636898 -54040650 + L1P5 LINE L1 5016 6262 -605 2735 128 2 14 chr18 32636924 32637345 -54040203 + MER1A DNA MER1_type 9 424 -105 237 235 0 0 chr18 32637446 32637497 -54040051 - L1ME LINE L1 -394 5772 5722 1838 161 6 28 chr18 32637535 32637852 -54039696 - AluJb SINE Alu -2 310 1 1034 237 12 40 chr18 32637862 32638260 -54039288 - L1M4 LINE L1 -5207 1652 1265 503 276 64 16 chr18 32638785 32639035 -54038513 - L1M4 LINE L1 -6569 290 29 733 178 8 0 chr18 32639210 32639328 -54038220 + FLAM_C SINE Alu 1 119 -14 324 0 0 0 chr18 32639330 32639366 -54038182 + (TG)n Simple_repeat Simple_repeat 1 36 0 * 537 30 0 0 chr18 32639365 32639432 -54038116 + (GA)n Simple_repeat Simple_repeat 1 67 0 614 129 0 21 chr18 32639432 32639525 -54038023 + AluJb SINE Alu 205 295 -17 942 281 275 21 chr18 32639696 32640448 -54037100 + L2 LINE L2 1961 2903 -411 378 306 75 16 chr18 32640468 32640654 -54036894 - MLT1J LTR MaLR -314 197 1 1136 123 0 0 chr18 32640830 32641001 -54036547 - HERVH LTR ERV1 -7542 171 1 2096 87 18 17 chr18 32641003 32641404 -54036144 - LTR7 LTR ERV1 -2 448 1 11658 184 7 12 chr18 32641404 32643655 -54033893 - L1P LINE L1 -2001 4145 1906 2221 107 0 13 chr18 32644176 32644475 -54033073 - AluSx SINE Alu -17 295 1 1570 213 13 3 chr18 32645427 32645728 -54031820 - AluJo SINE Alu -8 304 1 900 232 101 0 chr18 32646502 32646709 -54030839 - MIR SINE MIR -1 261 34 1472 139 24 114 chr18 32647039 32647371 -54030177 + AluYb8 SINE Alu 1 302 -16 2057 69 0 18 chr18 32647898 32648173 -54029375 - AluYa5 SINE Alu -3 308 39 5872 96 0 1 chr18 32649534 32650349 -54027199 + L1PA8 LINE L1 5359 6172 0 1532 119 127 0 chr18 32650357 32650601 -54026947 + AluSc SINE Alu 5 279 -30 251 71 24 0 chr18 32650604 32650646 -54026902 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 24 96 0 0 chr18 32651436 32651509 -54026039 + AT_rich Low_complexity Low_complexity 1 73 0 312 246 33 123 chr18 32651741 32651863 -54025685 + L2 LINE L2 3162 3272 0 212 175 63 0 chr18 32652405 32652468 -54025080 + (CA)n Simple_repeat Simple_repeat 2 68 0 232 333 59 38 chr18 32652995 32653181 -54024367 + L2 LINE L2 2894 3083 -189 349 301 34 41 chr18 32653815 32653961 -54023587 - MIR SINE MIR -111 151 7 332 365 0 24 chr18 32654152 32654278 -54023270 - MER5A DNA MER1_type -4 185 63 555 16 0 0 chr18 32654871 32654935 -54022613 + (TA)n Simple_repeat Simple_repeat 1 64 0 283 293 155 0 chr18 32655691 32655807 -54021741 - L2 LINE L2 0 3313 3180 993 372 105 25 chr18 32655900 32656672 -54020876 - L2 LINE L2 -458 2856 2023 213 363 79 11 chr18 32656776 32656966 -54020582 + L2 LINE L2 2065 2267 -1047 422 259 63 114 chr18 32657252 32657934 -54019614 - L1MC4a LINE L1 -1908 5900 5254 2554 39 13 3 chr18 32658119 32658424 -54019124 - AluY SINE Alu -3 308 1 431 306 99 47 chr18 32658463 32658868 -54018680 - L1MC4a LINE L1 -1117 5029 4604 21 0 0 0 chr18 32659185 32659206 -54018342 + AT_rich Low_complexity Low_complexity 1 21 0 3006 184 6 10 chr18 32659883 32660550 -54016998 + L1 LINE L1 4170 4805 -1341 207 88 0 0 chr18 32660721 32660755 -54016793 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 822 59 84 8 chr18 32660755 32660874 -54016674 - L1PA8 LINE L1 -20 6152 6025 502 274 175 21 chr18 32660855 32661387 -54016161 - L1MC4a LINE L1 -236 7572 7018 * 387 259 136 0 chr18 32661446 32661608 -54015940 + L1MC4 LINE L1 7791 7974 -68 3584 38 0 0 chr18 32662479 32662906 -54014642 - L1PA7 LINE L1 -271 5883 5457 392 33 0 50 chr18 32662906 32662961 -54014587 + L1PA8 LINE L1 6103 6159 -13 1729 176 13 3 chr18 32663356 32663663 -54013885 - AluJb SINE Alu 0 312 3 287 291 48 48 chr18 32664117 32664220 -54013328 + L2 LINE L2 3139 3241 -31 25 31 0 0 chr18 32664819 32664851 -54012697 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr18 32664864 32664888 -54012660 + AT_rich Low_complexity Low_complexity 1 24 0 945 173 0 17 chr18 32664888 32665061 -54012487 - AluSg/x SINE Alu -21 291 122 23 0 0 0 chr18 32665228 32665251 -54012297 + AT_rich Low_complexity Low_complexity 1 23 0 37 18 0 18 chr18 32665264 32665299 -54012249 + AT_rich Low_complexity Low_complexity 1 36 -18 1659 151 0 17 chr18 32665299 32665590 -54011958 - AluSq SINE Alu -27 286 1 37 18 0 18 chr18 32665590 32665609 -54011939 + AT_rich Low_complexity Low_complexity 36 54 0 689 276 37 14 chr18 32665736 32665953 -54011595 - MER58A DNA MER1_type -1 223 2 353 253 236 31 chr18 32665974 32666167 -54011381 - L1MC4 LINE L1 -1 8041 7889 1822 153 10 3 chr18 32666167 32666461 -54011087 + AluSx SINE Alu 1 296 -16 353 253 236 31 chr18 32666461 32666560 -54010988 - L1MC4 LINE L1 -153 7889 7689 975 106 69 16 chr18 32666936 32667124 -54010424 + L1MA4 LINE L1 6097 6294 -6 1019 192 56 0 chr18 32667969 32668167 -54009381 - MER3 DNA MER1_type 0 209 1 21 0 0 0 chr18 32669363 32669384 -54008164 + AT_rich Low_complexity Low_complexity 1 21 0 207 227 41 103 chr18 32674042 32674139 -54003409 + L2 LINE L2 3136 3226 -46 27 49 0 0 chr18 32675427 32675468 -54002080 + AT_rich Low_complexity Low_complexity 1 41 0 805 290 55 0 chr18 32675751 32675968 -54001580 - MIR SINE MIR 0 262 34 184 305 21 116 chr18 32676327 32676517 -54001031 + MER5A DNA MER1_type 13 184 -5 277 288 88 16 chr18 32678209 32678334 -53999214 - MER94 DNA DNA 0 134 1 256 293 43 100 chr18 32678419 32678559 -53998989 + MIR SINE MIR 118 249 -13 251 359 126 13 chr18 32678865 32679024 -53998524 + L3 LINE CR1 1355 1531 -46 1791 172 3 7 chr18 32681204 32681501 -53996047 + AluJb SINE Alu 1 296 -16 2493 31 41 0 chr18 32681501 32681792 -53995756 + AluY SINE Alu 1 303 -8 287 269 0 132 chr18 32682027 32682080 -53995468 - MER5A DNA MER1_type 0 189 131 2105 119 3 0 chr18 32682080 32682408 -53995140 - AluSq SINE Alu 0 329 1 287 269 0 132 chr18 32682408 32682556 -53994992 - MER5A DNA MER1_type -58 131 5 5114 144 63 25 chr18 32685397 32685569 -53991979 - L1MA8 LINE L1 -1 6290 6126 2232 138 0 0 chr18 32685569 32685880 -53991668 - AluSx SINE Alu -1 311 1 5114 144 63 25 chr18 32685880 32687156 -53990392 - L1MA8 LINE L1 -165 6126 4790 331 313 56 21 chr18 32688095 32688239 -53989309 - MIR SINE MIR -22 240 92 501 51 0 39 chr18 32688240 32688318 -53989230 + AluSp/q SINE Alu 232 306 -7 1139 148 56 0 chr18 32688581 32688777 -53988771 - MER61E LTR ERV1 -22 547 341 318 224 0 71 chr18 32688851 32688949 -53988599 - MER61E LTR ERV1 -380 189 99 639 202 0 0 chr18 32688952 32689061 -53988487 - LTR25 LTR ERV1 -438 356 248 271 360 66 7 chr18 32689176 32689312 -53988236 + MIR SINE MIR 76 219 -43 227 257 0 30 chr18 32689395 32689496 -53988052 + (CTAA)n Simple_repeat Simple_repeat 4 101 0 607 295 18 124 chr18 32690135 32690715 -53986833 - L2 LINE L2 0 3272 2754 678 200 15 0 chr18 32691108 32691238 -53986310 + FLAM_A SINE Alu 2 133 0 22 35 0 0 chr18 32691238 32691267 -53986281 + AT_rich Low_complexity Low_complexity 1 29 0 298 320 94 8 chr18 32691448 32691576 -53985972 + MIR SINE MIR 13 151 -111 509 241 151 22 chr18 32691674 32691881 -53985667 - MIR SINE MIR -21 241 15 424 316 110 23 chr18 32692926 32693144 -53984404 - MIR SINE MIR 0 262 26 21 0 0 0 chr18 32693501 32693522 -53984026 + AT_rich Low_complexity Low_complexity 1 21 0 2077 262 37 7 chr18 32694953 32695552 -53981996 - L1ME1 LINE L1 -27 6139 5523 1385 275 42 36 chr18 32695567 32696397 -53981151 - L1MCc LINE L1 -4892 1531 845 393 39 0 0 chr18 32696688 32696739 -53980809 + (TG)n Simple_repeat Simple_repeat 2 52 0 579 250 121 45 chr18 32696750 32697106 -53980442 - L1MCc LINE L1 -6029 394 12 265 353 86 7 chr18 32697324 32697463 -53980085 + MIR3 SINE MIR 32 181 -27 364 282 70 28 chr18 32697573 32697715 -53979833 + MIR SINE MIR 5 152 -110 26 50 0 0 chr18 32697715 32697755 -53979793 + AT_rich Low_complexity Low_complexity 1 40 0 276 344 23 16 chr18 32698388 32698516 -53979032 - MER5B DNA MER1_type -49 129 1 277 310 103 27 chr18 32699118 32699302 -53978246 + MIR SINE MIR 48 245 -17 1370 106 5 0 chr18 32699692 32699881 -53977667 - THE1A LTR MaLR 0 355 166 319 269 160 13 chr18 32700212 32700368 -53977180 - MIR3 SINE MIR -11 197 19 2395 75 13 0 chr18 32701032 32701445 -53976103 - AluSc SINE Alu 0 417 1 311 271 24 24 chr18 32702084 32702169 -53975379 - MIR3 SINE MIR -17 191 107 374 281 23 0 chr18 32703017 32703132 -53974416 + MIR SINE MIR 113 227 -35 24 67 0 0 chr18 32703337 32703382 -53974166 + AT_rich Low_complexity Low_complexity 1 45 0 203 250 31 0 chr18 32703502 32703566 -53973982 + A-rich Low_complexity Low_complexity 2 67 0 22 56 0 0 chr18 32703681 32703717 -53973831 + AT_rich Low_complexity Low_complexity 1 36 0 311 301 9 0 chr18 32704615 32704728 -53972820 + (CA)n Simple_repeat Simple_repeat 2 115 0 239 208 178 50 chr18 32704968 32705069 -53972479 + L2 LINE L2 3199 3312 -1 236 333 113 33 chr18 32705989 32706229 -53971319 + L2 LINE L2 1211 1469 -1845 329 140 0 0 chr18 32706699 32706749 -53970799 - FLAM_A SINE Alu -4 129 80 279 54 0 0 chr18 32706822 32706859 -53970689 + (TAA)n Simple_repeat Simple_repeat 2 38 0 319 366 0 25 chr18 32707369 32707530 -53970018 - MARNA DNA Mariner -345 241 85 316 306 46 41 chr18 32707878 32708074 -53969474 - L1MC4a LINE L1 -1878 5930 5734 318 313 156 17 chr18 32708347 32708526 -53969022 - MIR SINE MIR 0 262 59 21 36 0 0 chr18 32709824 32709852 -53967696 + AT_rich Low_complexity Low_complexity 1 28 0 507 339 22 6 chr18 32712329 32712509 -53965039 - MIR SINE MIR -74 188 6 336 282 48 0 chr18 32712532 32712635 -53964913 + MIR SINE MIR 49 156 -106 216 167 42 0 chr18 32712668 32712716 -53964832 + (TA)n Simple_repeat Simple_repeat 1 50 0 200 33 0 33 chr18 32713004 32713034 -53964514 + (TTATA)n Simple_repeat Simple_repeat 2 30 0 2009 110 14 0 chr18 32714406 32714717 -53962831 - AluSx SINE Alu 0 315 1 433 347 80 0 chr18 32715771 32715947 -53961601 + MIR SINE MIR 2 191 -71 296 271 104 49 chr18 32716068 32716212 -53961336 - L2 LINE L2 0 3313 3162 519 322 128 25 chr18 32716212 32716650 -53960898 + L1ME4a LINE L1 5606 6088 -33 26 0 0 0 chr18 32716715 32716741 -53960807 + AT_rich Low_complexity Low_complexity 1 26 0 1529 128 4 4 chr18 32717489 32717715 -53959833 + AluSq SINE Alu 1 226 -87 186 411 55 30 chr18 32717736 32717972 -53959576 - L2 LINE L2 -221 3051 2810 254 347 83 21 chr18 32718021 32718187 -53959361 + MIR SINE MIR 38 214 -48 202 323 48 0 chr18 32718415 32718477 -53959071 - L3 LINE CR1 -2 1575 1511 2210 112 7 3 chr18 32719088 32719393 -53958155 - AluSc SINE Alu 0 309 4 374 298 8 22 chr18 32719537 32719691 -53957857 + CT-rich Low_complexity Low_complexity 1 151 0 1857 144 0 38 chr18 32720064 32720377 -53957171 - AluJb SINE Alu -11 301 1 629 160 9 0 chr18 32722527 32722633 -53954915 - U6 snRNA snRNA 0 107 1 22 56 0 0 chr18 32722953 32722989 -53954559 + AT_rich Low_complexity Low_complexity 1 36 0 216 280 156 78 chr18 32723652 32724049 -53953499 + L2 LINE L2 2827 3254 -18 565 258 159 22 chr18 32724459 32724730 -53952818 + L2 LINE L2 3003 3310 -3 42996 33 22 1 chr18 32725134 32731162 -53946386 - L1PA2 LINE L1 -1 6154 2 310 299 140 36 chr18 32737756 32737977 -53939571 - HAL1 LINE L1 -1162 1345 1102 215 237 17 17 chr18 32737977 32738036 -53939512 + CT-rich Low_complexity Low_complexity 1 59 0 1950 112 67 28 chr18 32738683 32739040 -53938508 - THE1C LTR MaLR 0 375 5 199 297 99 10 chr18 32739339 32739440 -53938108 + L2 LINE L2 2927 3036 -236 996 282 65 57 chr18 32739476 32740031 -53937517 - L2 LINE L2 0 3313 2710 1656 201 3 0 chr18 32740031 32740324 -53937224 - AluJo SINE Alu -18 294 1 996 282 65 57 chr18 32740324 32740441 -53937107 - L2 LINE L2 -603 2710 2595 940 291 61 12 chr18 32741052 32741396 -53936152 - LTR16C LTR ERVL 0 491 131 225 0 0 0 chr18 32741830 32741855 -53935693 + (T)n Simple_repeat Simple_repeat 1 25 0 972 136 71 43 chr18 32742619 32742803 -53934745 - MER5A DNA MER1_type 0 189 1 2121 100 0 47 chr18 32742928 32743283 -53934265 + AluSx SINE Alu 1 341 0 7558 52 7 1 chr18 32743466 32744704 -53932844 + L1PA7 LINE L1 4911 6153 -1 185 282 252 0 chr18 32745556 32745659 -53931889 + L2 LINE L2 3184 3312 -1 2160 106 23 3 chr18 32745682 32745985 -53931563 + AluSc SINE Alu 1 309 0 191 250 0 19 chr18 32746138 32746190 -53931358 - L2 LINE L2 -79 3234 3184 235 301 137 27 chr18 32746607 32746826 -53930722 - L2 LINE L2 -658 2656 2414 320 146 73 0 chr18 32747505 32747560 -53929988 + L2 LINE L2 3255 3313 0 337 205 58 80 chr18 32747662 32747825 -53929723 - MER20B DNA MER1_type -4 215 54 416 317 118 73 chr18 32748104 32748527 -53929021 + L2 LINE L2 2812 3253 -19 414 100 0 0 chr18 32748818 32748878 -53928670 + (TTCC)n Simple_repeat Simple_repeat 1 60 0 2310 82 7 3 chr18 32748878 32749170 -53928378 - AluSx SINE Alu -19 293 1 1921 181 65 86 chr18 32749768 32750244 -53927304 + MLT1C LTR MaLR 1 466 -1 1661 196 100 16 chr18 32750370 32750799 -53926749 - Charlie4a DNA MER1_type -24 484 20 207 0 0 0 chr18 32751578 32751601 -53925947 + (T)n Simple_repeat Simple_repeat 1 23 0 270 0 0 0 chr18 32752250 32752280 -53925268 + (CA)n Simple_repeat Simple_repeat 2 31 0 298 246 16 33 chr18 32753388 32753510 -53924038 + C-rich Low_complexity Low_complexity 3 122 0 22 0 0 0 chr18 32753599 32753621 -53923927 + GC_rich Low_complexity Low_complexity 1 22 0 447 296 85 5 chr18 32754261 32754460 -53923088 + MIR SINE MIR 43 257 -5 3895 99 89 5 chr18 32754607 32755170 -53922378 - LTR66 LTR ERVL 0 610 1 5304 71 126 1 chr18 32755170 32755903 -53921645 - HERVL66 LTR ERVL 0 4329 3506 4997 66 51 6 chr18 32755905 32756555 -53920993 - HERVL66 LTR ERVL -997 3332 2654 * 13835 81 14 2 chr18 32756535 32758311 -53919237 - HERVL66 LTR ERVL -2532 1797 1 4472 93 13 37 chr18 32758311 32758539 -53919009 - LTR66 LTR ERVL 0 610 378 354 45 0 0 chr18 32758539 32758583 -53918965 + (CA)n Simple_repeat Simple_repeat 2 45 0 4472 93 13 37 chr18 32758583 32758979 -53918569 - LTR66 LTR ERVL -232 378 1 21 0 0 0 chr18 32760396 32760417 -53917131 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr18 32760837 32760884 -53916664 + AT_rich Low_complexity Low_complexity 1 47 0 228 293 20 61 chr18 32760932 32761031 -53916517 - L2 LINE L2 -198 3074 2980 2496 96 30 33 chr18 32761569 32761932 -53915616 + THE1B LTR MaLR 1 362 -2 211 254 179 0 chr18 32762716 32762783 -53914765 + L3b LINE CR1 1143 1221 -362 2088 118 10 3 chr18 32762790 32763086 -53914462 + AluSq SINE Alu 1 298 -15 943 281 44 47 chr18 32764303 32764709 -53912839 + L2 LINE L2 2909 3313 0 27 29 0 0 chr18 32765649 32765683 -53911865 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr18 32766099 32766123 -53911425 + AT_rich Low_complexity Low_complexity 1 24 0 2091 113 3 3 chr18 32766226 32766527 -53911021 - AluSg SINE Alu -9 301 1 563 259 157 23 chr18 32768574 32768790 -53908758 - MIR SINE MIR -6 256 12 2466 59 13 0 chr18 32768854 32769161 -53908387 - AluY SINE Alu 0 311 1 28 48 0 0 chr18 32770732 32770774 -53906774 + AT_rich Low_complexity Low_complexity 1 42 0 182 319 26 35 chr18 32770777 32770890 -53906658 - L3b LINE CR1 -223 1360 1249 342 80 0 0 chr18 32770912 32770962 -53906586 + (TC)n Simple_repeat Simple_repeat 1 50 0 248 304 51 0 chr18 32771163 32771242 -53906306 + MIR SINE MIR 65 147 -115 2193 137 21 15 chr18 32772564 32772899 -53904649 + MER1B DNA MER1_type 1 337 0 2755 10 7 3 chr18 32774657 32774965 -53902583 - AluYb8 SINE Alu -9 309 1 1082 157 0 0 chr18 32776874 32777033 -53900515 - FRAM SINE Alu -7 159 1 239 244 24 37 chr18 32778477 32778559 -53898989 + L1MC5 LINE L1 7845 7925 -36 706 237 41 31 chr18 32780141 32780335 -53897213 + MIR SINE MIR 8 203 -59 518 156 0 33 chr18 32780335 32780425 -53897123 - MLT1A1 LTR MaLR -278 87 1 328 365 56 19 chr18 32780515 32780781 -53896767 + L2 LINE L2 2590 2865 -449 229 349 48 24 chr18 32780834 32780960 -53896588 + L2 LINE L2 2931 3059 -213 26 30 0 0 chr18 32781375 32781408 -53896140 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr18 32781810 32781834 -53895714 + AT_rich Low_complexity Low_complexity 1 24 0 2146 208 26 8 chr18 32782593 32782982 -53894566 - MSTD LTR MaLR 0 396 1 2143 117 0 3 chr18 32784289 32784579 -53892969 - AluSq SINE Alu -20 293 5 23 108 0 0 chr18 32785494 32785587 -53891961 + AT_rich Low_complexity Low_complexity 1 93 0 2251 76 42 0 chr18 32786499 32786787 -53890761 - AluSp SINE Alu -13 300 1 402 289 89 7 chr18 32787826 32787961 -53889587 + MIR SINE MIR 51 196 -66 183 339 18 0 chr18 32788270 32788326 -53889222 + MIR SINE MIR 42 98 -110 186 351 48 62 chr18 32788331 32788539 -53889009 - L2 LINE L2 -115 3157 2953 223 261 15 15 chr18 32788591 32788656 -53888892 - MER5B DNA MER1_type -10 168 104 204 324 62 49 chr18 32788746 32788971 -53888577 - L2 LINE L2 -562 2752 2525 1879 176 3 0 chr18 32789270 32789577 -53887971 + AluJb SINE Alu 1 308 -4 256 182 21 175 chr18 32792742 32792885 -53884663 - MER91A DNA MER1_type -34 162 42 27 62 0 0 chr18 32793613 32793661 -53883887 + AT_rich Low_complexity Low_complexity 1 48 0 342 137 26 120 chr18 32793663 32793713 -53883835 - L1MC5 LINE L1 -36 7925 7890 2018 95 11 14 chr18 32793713 32794120 -53883428 + AluSg SINE Alu 1 406 0 342 137 26 120 chr18 32794120 32794185 -53883363 - L1MC5 LINE L1 -71 7890 7820 35 98 0 0 chr18 32795028 32795140 -53882408 + AT_rich Low_complexity Low_complexity 1 112 0 424 352 81 17 chr18 32796359 32796595 -53880953 - MIR SINE MIR 0 262 12 1847 88 6 97 chr18 32796600 32796920 -53880628 - AluSq SINE Alu -10 303 13 34 24 0 0 chr18 32797596 32797637 -53879911 + AT_rich Low_complexity Low_complexity 1 41 0 450 143 82 0 chr18 32797719 32797817 -53879731 - L1MA8 LINE L1 -6 6285 6180 26 30 0 0 chr18 32798038 32798071 -53879477 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr18 32798531 32798560 -53878988 + AT_rich Low_complexity Low_complexity 1 29 0 645 241 94 40 chr18 32798799 32799023 -53878525 + MIR SINE MIR 2 237 -25 234 0 0 0 chr18 32799099 32799125 -53878423 + (T)n Simple_repeat Simple_repeat 1 26 0 2151 107 9 0 chr18 32799225 32799544 -53878004 + L1PA11 LINE L1 5851 6172 -2 30 27 0 0 chr18 32799564 32799601 -53877947 + AT_rich Low_complexity Low_complexity 1 37 0 229 320 48 48 chr18 32799696 32799799 -53877749 - MIR3 SINE MIR -6 202 100 396 325 18 0 chr18 32800178 32800292 -53877256 + L2 LINE L2 3193 3308 -5 196 300 82 18 chr18 32801269 32801379 -53876169 + L3b LINE CR1 1121 1237 -346 636 309 34 38 chr18 32801392 32801657 -53875891 - L2 LINE L2 0 3313 3050 2484 82 0 0 chr18 32801868 32802174 -53875374 - AluSc SINE Alu -3 306 1 432 246 77 8 chr18 32802270 32802400 -53875148 + MER91C DNA MER1_type 1 139 -1 199 280 28 56 chr18 32803611 32803718 -53873830 - MIR SINE MIR -40 222 119 1209 151 58 62 chr18 32804275 32804600 -53872948 - MER33 DNA MER1_type 0 324 1 1851 151 30 7 chr18 32805215 32805513 -53872035 + AluSx SINE Alu 1 305 -7 825 62 0 146 chr18 32807600 32807744 -53869804 - AluSg/x SINE Alu -20 292 170 1989 97 11 0 chr18 32807766 32808082 -53869466 - AluY SINE Alu 0 319 1 811 83 0 45 chr18 32808167 32808300 -53869248 - L1MB3 LINE L1 -1 6182 6056 831 148 60 0 chr18 32808324 32808473 -53869075 + MER58B DNA MER1_type 169 326 -15 353 275 20 67 chr18 32808992 32809141 -53868407 + L1ME4a LINE L1 5980 6121 0 2152 99 0 25 chr18 32810552 32810866 -53866682 + AluSx SINE Alu 1 306 -6 277 280 52 0 chr18 32811998 32812075 -53865473 - L1ME LINE L1 -543 5579 5501 24 53 0 0 chr18 32812172 32812210 -53865338 + AT_rich Low_complexity Low_complexity 1 38 0 2191 117 32 30 chr18 32813382 32813524 -53864024 + LTR56 LTR ERV1 66 206 -239 1368 120 96 0 chr18 32813524 32813732 -53863816 + MER30 DNA MER1_type 2 229 -1 2191 117 32 30 chr18 32813732 32813958 -53863590 + LTR56 LTR ERV1 206 435 -10 1571 199 0 7 chr18 32814560 32814727 -53862821 - AluJb SINE Alu -24 288 122 207 0 0 0 chr18 32814727 32814750 -53862798 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1571 199 0 7 chr18 32814750 32814863 -53862685 - AluJb SINE Alu -190 122 10 398 322 98 45 chr18 32815031 32815478 -53862070 + L1 LINE L1 4300 4770 -1376 297 0 0 0 chr18 32816137 32816170 -53861378 + (TG)n Simple_repeat Simple_repeat 2 34 0 211 319 103 35 chr18 32817316 32817432 -53860116 + L2 LINE L2 3149 3272 0 460 295 54 47 chr18 32817643 32817871 -53859677 - MIR SINE MIR -33 229 5 22 0 0 0 chr18 32818252 32818274 -53859274 + AT_rich Low_complexity Low_complexity 1 22 0 8472 194 47 23 chr18 32818279 32819616 -53857932 - L1MC1 LINE L1 -16 6317 5013 3484 51 0 0 chr18 32819616 32820048 -53857500 + L1PA5 LINE L1 5717 6148 -6 8472 194 47 23 chr18 32820048 32820382 -53857166 - L1MC1 LINE L1 -1320 5013 4688 1958 140 0 33 chr18 32820382 32820689 -53856859 - AluSx SINE Alu -13 299 3 8472 194 47 23 chr18 32820689 32822382 -53855166 - L1MC1 LINE L1 -1645 4688 2869 261 294 22 73 chr18 32822527 32822663 -53854885 + MIR SINE MIR 128 256 -6 243 269 124 27 chr18 32822841 32823098 -53854450 - L1MC5 LINE L1 -324 7637 7356 758 153 0 58 chr18 32823235 32823372 -53854176 - FLAM_C SINE Alu -4 129 1 180 0 0 0 chr18 32823372 32823392 -53854156 + (T)n Simple_repeat Simple_repeat 1 20 0 288 321 143 49 chr18 32824054 32824341 -53853207 + L2 LINE L2 2958 3271 -1 210 307 16 24 chr18 32824683 32824810 -53852738 + CT-rich Low_complexity Low_complexity 4 129 0 619 259 39 47 chr18 32826130 32826385 -53851163 + MER112 DNA MER1_type 2 254 -2 194 354 51 0 chr18 32826685 32826764 -53850784 - L2 LINE L2 -4 3268 3186 276 314 86 7 chr18 32829135 32829275 -53848273 + L1ME LINE L1 5599 5749 -372 382 192 115 0 chr18 32829505 32829609 -53847939 + L1ME4a LINE L1 6002 6117 -4 400 328 70 72 chr18 32830215 32830618 -53846930 + L2 LINE L2 2871 3272 0 21 0 0 0 chr18 32830776 32830797 -53846751 + AT_rich Low_complexity Low_complexity 1 21 0 4559 139 15 0 chr18 32831133 32831868 -53845680 - L1PA16 LINE L1 -4 6162 5417 227 248 38 0 chr18 32832102 32832207 -53845341 + (TA)n Simple_repeat Simple_repeat 1 109 0 22 56 0 0 chr18 32832921 32832957 -53844591 + AT_rich Low_complexity Low_complexity 1 36 0 24 32 0 0 chr18 32833265 32833296 -53844252 + AT_rich Low_complexity Low_complexity 1 31 0 548 265 67 55 chr18 32833299 32833742 -53843806 + L1MC4a LINE L1 5476 5904 -217 246 339 98 9 chr18 32834237 32834349 -53843199 - L2 LINE L2 -5 3267 3146 305 340 66 52 chr18 32835092 32835186 -53842362 + MIR SINE MIR 6 97 -165 1983 128 14 3 chr18 32835186 32835476 -53842072 + AluSx SINE Alu 1 293 -19 305 340 66 52 chr18 32835476 32835593 -53841955 + MIR SINE MIR 97 220 -42 2669 94 3 0 chr18 32836035 32836407 -53841141 - L1PA13 LINE L1 -1 6162 5790 24 111 0 0 chr18 32836450 32836558 -53840990 + AT_rich Low_complexity Low_complexity 1 108 0 32 57 0 0 chr18 32836696 32836749 -53840799 + AT_rich Low_complexity Low_complexity 1 53 0 26 0 0 0 chr18 32836953 32836979 -53840569 + AT_rich Low_complexity Low_complexity 1 26 0 2065 137 7 7 chr18 32837397 32837704 -53839844 + AluSx SINE Alu 1 307 -5 730 105 9 0 chr18 32838062 32838176 -53839372 + L1P5 LINE L1 5573 5687 -469 4264 147 7 20 chr18 32838200 32838913 -53838635 - L1PA16 LINE L1 -1 6165 5462 227 272 158 35 chr18 32839328 32839442 -53838106 + MIR3 SINE MIR 50 177 -31 413 311 8 0 chr18 32839808 32839927 -53837621 + L2 LINE L2 3194 3313 0 26 0 0 0 chr18 32840390 32840416 -53837132 + AT_rich Low_complexity Low_complexity 1 26 0 2974 137 31 2 chr18 32841900 32842411 -53835137 - L1MA3 LINE L1 -160 6145 5620 263 202 57 0 chr18 32843955 32844079 -53833469 + (TA)n Simple_repeat Simple_repeat 1 131 0 547 191 45 0 chr18 32844079 32844189 -53833359 - MIR SINE MIR -59 203 89 305 159 91 45 chr18 32844198 32844286 -53833262 - MER46A DNA MER2_type -90 146 55 399 154 0 0 chr18 32844200 32844265 -53833283 + Tigger4(Zombi) DNA MER2_type 1 65 -2666 227 200 0 0 chr18 32844299 32844339 -53833209 + Tigger4(Zombi) DNA MER2_type 2690 2729 -2 412 237 0 0 chr18 32844343 32844419 -53833129 - MIR SINE MIR -184 78 3 855 143 6 25 chr18 32845698 32845859 -53831689 + L1MA3 LINE L1 6148 6305 0 339 317 200 7 chr18 32846447 32846592 -53830956 - MER5B DNA MER1_type -4 174 2 2330 110 0 0 chr18 32847336 32847646 -53829902 + AluSg SINE Alu 1 310 0 1683 196 0 3 chr18 32848495 32848810 -53828738 - AluJo SINE Alu 0 314 1 23 54 0 0 chr18 32848831 32848868 -53828680 + AT_rich Low_complexity Low_complexity 1 37 0 296 233 55 27 chr18 32848916 32848989 -53828559 + L2 LINE L2 3239 3313 0 391 275 113 36 chr18 32850068 32850290 -53827258 - L1ME4a LINE L1 -173 5948 5710 416 315 60 15 chr18 32851147 32851347 -53826201 + L2 LINE L2 2849 3057 -215 2198 121 3 3 chr18 32856362 32856667 -53820881 - AluSx SINE Alu -7 305 1 445 273 36 100 chr18 32857636 32857756 -53819792 + MIR SINE MIR 29 126 -136 2094 110 30 3 chr18 32857756 32858057 -53819491 + AluSx SINE Alu 1 309 -3 445 273 36 100 chr18 32858057 32858185 -53819363 + MIR SINE MIR 126 261 -1 235 408 53 0 chr18 32858381 32858457 -53819091 + L2 LINE L2 3141 3220 -52 1057 139 75 11 chr18 32858496 32858683 -53818865 - AluJb SINE Alu -103 209 11 181 278 37 0 chr18 32859343 32859397 -53818151 - L2 LINE L2 -14 3299 3244 21 36 0 0 chr18 32859777 32859805 -53817743 + AT_rich Low_complexity Low_complexity 1 28 0 2174 94 4 0 chr18 32859839 32860114 -53817434 - AluSp SINE Alu -37 276 1 747 258 41 32 chr18 32860165 32860386 -53817162 - MER58A DNA MER1_type -1 223 1 2055 181 75 3 chr18 32860716 32861102 -53816446 + MSTB LTR MaLR 1 414 -12 231 401 14 14 chr18 32861420 32861562 -53815986 + L2 LINE L2 2771 2912 -402 227 181 56 14 chr18 32862476 32862548 -53815000 + (TTTA)n Simple_repeat Simple_repeat 2 76 0 627 208 5 137 chr18 32862566 32862778 -53814770 - MER58B DNA MER1_type -15 326 26 227 204 0 0 chr18 32864873 32864917 -53812631 + (AAATG)n Simple_repeat Simple_repeat 3 46 0 374 261 159 0 chr18 32866139 32866277 -53811271 + MIR SINE MIR 46 205 -57 23 97 0 0 chr18 32869158 32869230 -53808318 + AT_rich Low_complexity Low_complexity 1 72 0 204 384 47 27 chr18 32869502 32869760 -53807788 - L2 LINE L2 -171 3101 2839 1967 226 48 60 chr18 32869763 32870579 -53806969 - Charlie2 DNA MER1_type -202 2660 1855 417 321 116 13 chr18 32870583 32870807 -53806741 - Charlie2 DNA MER1_type -2540 322 76 789 89 0 9 chr18 32871981 32872093 -53805455 - HY1 scRNA scRNA -1 111 1 2042 119 0 35 chr18 32872442 32872753 -53804795 + AluSg SINE Alu 1 300 -10 374 301 52 23 chr18 32875056 32875229 -53802319 - MIR3 SINE MIR -1 207 30 1517 213 0 14 chr18 32879296 32879582 -53797966 - AluJo SINE Alu -21 291 10 187 323 0 16 chr18 32879715 32879777 -53797771 - MIR3 SINE MIR -12 196 136 465 280 38 30 chr18 32881244 32881376 -53796172 + MER5A DNA MER1_type 57 189 0 2216 107 10 3 chr18 32881441 32881739 -53795809 - AluSx SINE Alu -10 302 3 903 199 174 8 chr18 32882093 32882334 -53795214 - MLT1D LTR MaLR -15 490 210 484 234 187 18 chr18 32882342 32882615 -53794933 - L1ME LINE L1 -491 5671 5353 42 57 0 0 chr18 32882623 32882693 -53794855 + AT_rich Low_complexity Low_complexity 1 70 0 302 287 180 13 chr18 32882785 32883085 -53794463 - L1ME LINE L1 -896 5250 4901 30 59 0 0 chr18 32883141 32883192 -53794356 + AT_rich Low_complexity Low_complexity 1 51 0 1299 286 96 27 chr18 32883192 32884264 -53793284 - L1ME LINE L1 -1286 4860 3715 * 1479 243 39 48 chr18 32884261 32884934 -53792614 - L1ME2 LINE L1 -237 5925 5413 5598 112 3 3 chr18 32884948 32885071 -53792477 - L1PA16 LINE L1 -10 6156 6034 1962 132 7 3 chr18 32885071 32885366 -53792182 - AluSg SINE Alu -14 296 1 5598 112 3 3 chr18 32885366 32886699 -53790849 - L1PA16 LINE L1 -131 6035 4706 897 152 0 7 chr18 32886703 32886848 -53790700 - MLT1A1 LTR MaLR -221 144 1 234 370 11 0 chr18 32887274 32887366 -53790182 + MIR SINE MIR 45 137 -71 37 0 0 0 chr18 32887642 32887679 -53789869 + AT_rich Low_complexity Low_complexity 1 37 0 2377 96 0 0 chr18 32888957 32889258 -53788290 - AluSq SINE Alu -12 301 1 2093 113 0 13 chr18 32889439 32889750 -53787798 + AluY SINE Alu 1 307 -4 2878 269 77 38 chr18 32889879 32891052 -53786496 - L2 LINE L2 -459 2855 1637 799 276 38 5 chr18 32891391 32891601 -53785947 + MIR SINE MIR 19 235 -27 199 313 175 30 chr18 32891724 32891890 -53785658 - L2 LINE L2 -212 3060 2871 2580 125 28 16 chr18 32892909 32893332 -53784216 - MSTA LTR MaLR 0 428 1 25 31 0 0 chr18 32893856 32893888 -53783660 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr18 32894923 32894944 -53782604 + AT_rich Low_complexity Low_complexity 1 21 0 182 200 0 0 chr18 32897522 32897557 -53779991 + L2 LINE L2 3279 3313 0 844 234 128 0 chr18 32898644 32898871 -53778677 + MIR SINE MIR 7 262 0 184 380 62 0 chr18 32898866 32898979 -53778569 + L2 LINE L2 3176 3295 -18 * 1803 254 67 51 chr18 32899382 32899674 -53777874 + L1ME3A LINE L1 5453 5739 -431 2974 118 2 2 chr18 32899674 32900107 -53777441 + MER57B LTR ERV1 2 434 0 1803 254 67 51 chr18 32900107 32900520 -53777028 + L1ME3A LINE L1 5739 6169 -1 219 146 0 0 chr18 32901682 32901723 -53775825 + (TC)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr18 32902181 32902203 -53775345 + AT_rich Low_complexity Low_complexity 1 22 0 183 156 0 0 chr18 32902473 32902505 -53775043 + GA-rich Low_complexity Low_complexity 1 32 0 2466 39 3 0 chr18 32903329 32903643 -53773905 - AluY SINE Alu 0 315 1 22 35 0 0 chr18 32904619 32904648 -53772900 + AT_rich Low_complexity Low_complexity 1 29 0 210 291 64 57 chr18 32905113 32905254 -53772294 + MIR SINE MIR 84 225 -37 2230 101 0 3 chr18 32905504 32905801 -53771747 - AluSx SINE Alu -16 296 1 527 274 64 29 chr18 32905812 32906016 -53771532 + MIR SINE MIR 48 258 -4 27 0 0 0 chr18 32906413 32906440 -53771108 + AT_rich Low_complexity Low_complexity 1 27 0 224 48 71 48 chr18 32906456 32906540 -53771008 + (TA)n Simple_repeat Simple_repeat 1 86 0 21 0 0 0 chr18 32906619 32906640 -53770908 + AT_rich Low_complexity Low_complexity 1 21 0 1628 180 7 3 chr18 32906643 32906937 -53770611 + AluSx SINE Alu 1 295 -17 333 301 16 11 chr18 32907108 32907291 -53770257 - L1M4 LINE L1 -1808 4338 4155 * 752 221 15 121 chr18 32907286 32907617 -53769931 + L1ME2 LINE L1 5855 6150 -14 1535 255 96 70 chr18 32909180 32909837 -53767711 - HAL1 LINE L1 -33 2474 1785 1691 124 90 28 chr18 32909837 32910127 -53767421 - AluSx SINE Alu -4 308 1 1535 255 96 70 chr18 32910127 32910399 -53767149 - HAL1 LINE L1 -722 1785 1521 1857 104 11 14 chr18 32910413 32910700 -53766848 + L1PB1 LINE L1 5863 6148 -3 30 0 0 0 chr18 32910731 32910761 -53766787 + AT_rich Low_complexity Low_complexity 1 30 0 2075 134 3 0 chr18 32910999 32911289 -53766259 - AluSx SINE Alu -21 291 1 719 300 4 0 chr18 32911567 32911800 -53765748 - Tigger8 DNA MER2_type -123 543 310 521 342 218 20 chr18 32911928 32912580 -53764968 + HAL1 LINE L1 53 833 -1674 * 1274 238 113 30 chr18 32912578 32913083 -53764465 + HAL1 LINE L1 1491 2037 -470 373 303 110 25 chr18 32913271 32913582 -53763966 + L2 LINE L2 2920 3271 -1 332 257 44 110 chr18 32913582 32913718 -53763830 + L2 LINE L2 3146 3272 0 278 98 20 0 chr18 32914726 32914777 -53762771 + (GA)n Simple_repeat Simple_repeat 1 52 0 4677 180 31 36 chr18 32915384 32916837 -53760711 + L1MA9 LINE L1 4837 6282 -30 356 293 63 90 chr18 32917380 32917871 -53759677 - L1M4c LINE L1 -5095 1289 812 577 281 80 40 chr18 32918684 32918986 -53758562 - MARNA DNA Mariner -123 463 150 372 289 33 8 chr18 32919113 32919234 -53758314 + MIR SINE MIR 30 153 -55 1145 212 153 55 chr18 32921164 32921635 -53755913 + MLT2B1 LTR ERVL 1 517 -3 1982 126 0 69 chr18 32921824 32922157 -53755391 + AluSx SINE Alu 1 310 -2 2278 116 3 0 chr18 32923432 32923743 -53753805 - AluJb SINE Alu 0 312 1 485 105 0 13 chr18 32924995 32925071 -53752477 - MADE1 DNA Mariner 0 80 6 327 197 61 61 chr18 32925141 32925273 -53752275 + L1ME4a LINE L1 5990 6121 0 21 0 0 0 chr18 32927153 32927174 -53750374 + AT_rich Low_complexity Low_complexity 1 21 0 183 331 71 8 chr18 32927438 32927565 -53749983 + L2 LINE L2 3098 3232 -81 813 179 0 26 chr18 32929376 32929527 -53748021 + FRAM SINE Alu 29 175 -1 1737 171 18 0 chr18 32929864 32930145 -53747403 + AluJb SINE Alu 1 286 -26 421 233 175 48 chr18 32930293 32930482 -53747066 - MIR SINE MIR -33 229 17 1849 169 55 3 chr18 32930583 32930931 -53746617 - MER47A DNA MER2_type 0 366 1 6058 60 0 14 chr18 32931187 32931969 -53745579 + L1PA8 LINE L1 5400 6170 -2 758 252 11 95 chr18 32932536 32932737 -53744811 + MIR SINE MIR 13 190 -72 1648 166 0 47 chr18 32932737 32932861 -53744687 + AluJo SINE Alu 1 129 -255 2318 92 0 0 chr18 32932861 32933154 -53744394 - AluSg SINE Alu -17 293 1 1648 166 0 47 chr18 32933154 32933427 -53744121 + AluJo SINE Alu 129 384 0 758 252 11 95 chr18 32933427 32933486 -53744062 + MIR SINE MIR 190 252 -10 1920 131 37 3 chr18 32933858 32934155 -53743393 - AluSq SINE Alu -4 309 3 220 211 118 53 chr18 32934911 32934987 -53742561 + L2 LINE L2 2401 2481 -833 366 23 0 0 chr18 32935565 32935608 -53741940 + (TG)n Simple_repeat Simple_repeat 1 43 0 1513 167 49 26 chr18 32935608 32935872 -53741676 - AluJb SINE Alu -33 279 10 360 266 142 9 chr18 32936485 32936598 -53740950 + MER5A DNA MER1_type 59 186 -3 23 0 0 0 chr18 32937075 32937098 -53740450 + AT_rich Low_complexity Low_complexity 1 23 0 1914 122 22 11 chr18 32937442 32937749 -53739799 - AluSx SINE Alu 0 310 1 494 311 81 42 chr18 32938994 32939328 -53738220 + MLT1J LTR MaLR 130 476 -35 1279 230 167 9 chr18 32939624 32939972 -53737576 + MSTB1 LTR MaLR 4 406 -26 2101 122 20 0 chr18 32939993 32940297 -53737251 - AluSx SINE Alu -2 310 1 270 89 0 44 chr18 32940297 32940336 -53737212 + MSTB1 LTR MaLR 390 426 0 305 312 28 9 chr18 32993669 32993778 -53683770 - L3 LINE CR1 -3 1574 1464 918 152 12 136 chr18 32993976 32994226 -53683322 - MER20 DNA MER1_type 0 219 1 828 175 108 0 chr18 32994535 32994729 -53682819 - L1ME3A LINE L1 -18 6152 5938 1024 308 55 55 chr18 32994851 32995413 -53682135 + L2 LINE L2 2224 2785 -529 331 280 262 5 chr18 32995474 32995688 -53681860 + L2 LINE L2 2957 3225 -88 225 221 15 29 chr18 32995884 32995952 -53681596 - MLT1K LTR MaLR 0 588 522 604 296 147 37 chr18 32996042 32996417 -53681131 - MLT1L LTR MaLR -199 416 1 2459 208 66 20 chr18 32996491 32997101 -53680447 + L1MD3 LINE L1 7345 7982 -13 304 184 0 87 chr18 32997126 32997229 -53680319 + L1MC5 LINE L1 7834 7927 -34 393 290 148 0 chr18 32997400 32997562 -53679986 + MER5A DNA MER1_type 4 189 0 2233 93 3 10 chr18 32997898 32998200 -53679348 - AluY SINE Alu -11 300 1 207 315 64 72 chr18 32998789 32999238 -53678310 - L2 LINE L2 -1455 1859 1350 330 250 73 24 chr18 32999307 32999431 -53678117 + MER94 DNA DNA 5 134 0 432 219 244 6 chr18 32999666 32999830 -53677718 + MER3 DNA MER1_type 5 207 -2 1977 170 12 55 chr18 32999888 33000375 -53677173 + L1MA4 LINE L1 5824 6289 -11 1958 157 0 22 chr18 33002072 33002384 -53675164 + AluJb SINE Alu 3 307 -5 386 233 58 0 chr18 33003086 33003206 -53674342 - MER94 DNA DNA 0 134 8 439 268 238 17 chr18 33003222 33003457 -53674091 + L2 LINE L2 2329 2615 -699 27 0 0 0 chr18 33004048 33004075 -53673473 + AT_rich Low_complexity Low_complexity 1 27 0 821 137 25 43 chr18 33004257 33004418 -53673130 - MER58A DNA MER1_type 0 162 5 961 156 94 47 chr18 33005180 33005455 -53672093 + MER33 DNA MER1_type 2 289 -35 2417 80 0 0 chr18 33005910 33006209 -53671339 + AluY SINE Alu 1 299 -12 921 247 37 12 chr18 33006423 33006669 -53670879 - MIR SINE MIR -13 249 3 1678 156 0 28 chr18 33008053 33008335 -53669213 + AluJb SINE Alu 30 303 -9 229 327 107 57 chr18 33008394 33008553 -53668995 - MER5A DNA MER1_type -15 174 8 2192 85 0 27 chr18 33008646 33008940 -53668608 + AluSg SINE Alu 1 286 -24 467 209 0 0 chr18 33009492 33009578 -53667970 + Tigger3(Golem) DNA MER2_type 3 88 -2941 * 3294 136 49 15 chr18 33009577 33010188 -53667360 + Tigger3(Golem) DNA MER2_type 2397 3028 -1 2933 205 58 36 chr18 33010388 33010510 -53667038 + L1ME1 LINE L1 5349 5467 -699 1452 201 113 3 chr18 33010510 33010839 -53666709 - MLT1A1 LTR MaLR 0 365 1 2933 205 58 36 chr18 33010839 33011220 -53666328 + L1ME1 LINE L1 5467 5878 -288 2073 128 10 3 chr18 33011220 33011518 -53666030 + AluSx SINE Alu 1 300 -12 2933 205 58 36 chr18 33011518 33011809 -53665739 + L1ME1 LINE L1 5878 6161 -5 23 0 0 0 chr18 33012109 33012132 -53665416 + AT_rich Low_complexity Low_complexity 1 23 0 229 265 0 0 chr18 33013179 33013221 -53664327 + (TA)n Simple_repeat Simple_repeat 1 45 -23 1970 148 0 3 chr18 33013221 33013505 -53664043 - AluJo SINE Alu -26 286 4 229 265 0 0 chr18 33013505 33013530 -53664018 + (TA)n Simple_repeat Simple_repeat 44 68 0 1716 214 16 14 chr18 33014880 33015244 -53662304 - MLT1A1 LTR MaLR 0 365 1 279 0 0 0 chr18 33015698 33015729 -53661819 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 334 317 57 8 chr18 33015829 33015952 -53661596 - MIR3 SINE MIR -9 199 71 1350 189 15 42 chr18 33015977 33016242 -53661306 + AluJo SINE Alu 1 258 -54 2212 133 10 0 chr18 33016769 33017078 -53660470 - AluSx SINE Alu 0 312 1 2388 86 3 0 chr18 33017299 33017600 -53659948 - AluSx SINE Alu -10 302 1 1980 97 90 0 chr18 33018304 33018583 -53658965 + AluSc SINE Alu 1 304 -5 650 226 0 0 chr18 33018594 33018718 -53658830 + FLAM_A SINE Alu 2 125 -8 347 244 11 0 chr18 33019555 33019645 -53657903 - MIR SINE MIR -6 256 166 2526 55 0 0 chr18 33020128 33020419 -53657129 + AluY SINE Alu 1 291 -20 2060 122 34 0 chr18 33020512 33020808 -53656740 + AluSx SINE Alu 1 306 -6 246 247 123 68 chr18 33020809 33021028 -53656520 + L1MC4 LINE L1 7801 8031 -11 235 233 0 0 chr18 33021241 33021284 -53656264 + L2 LINE L2 3189 3231 -41 517 222 9 0 chr18 33022039 33022147 -53655401 + L2 LINE L2 3199 3307 -6 3871 103 0 13 chr18 33022512 33023045 -53654503 + MER1A DNA MER1_type 2 527 0 180 343 30 40 chr18 33023110 33023209 -53654339 - MIR SINE MIR -108 154 57 294 301 11 32 chr18 33023221 33023314 -53654234 + L2 LINE L2 3214 3304 -9 241 226 0 0 chr18 33024602 33024655 -53652893 - MLT1J LTR MaLR -9 502 450 802 221 87 31 chr18 33024762 33025016 -53652532 - MLT1J LTR MaLR -202 309 42 452 294 111 18 chr18 33025818 33026118 -53651430 - MLT1I LTR MaLR -3 406 98 2010 159 3 3 chr18 33026374 33026675 -53650873 + AluJb SINE Alu 1 301 -11 1149 260 88 2 chr18 33026686 33027163 -53650385 + L1M4 LINE L1 2346 2863 -3283 698 304 43 5 chr18 33027192 33027560 -53649988 + L1M4 LINE L1 2960 3341 -2805 247 146 281 11 chr18 33027975 33028064 -53649484 - L1MC4 LINE L1 0 8042 7930 892 236 119 6 chr18 33028114 33028432 -53649116 - L1MC4 LINE L1 -229 7813 7460 194 0 0 37 chr18 33028476 33028503 -53649045 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2454 84 0 0 chr18 33030185 33030494 -53647054 + AluSx SINE Alu 1 309 -3 205 175 263 0 chr18 33030716 33030773 -53646775 + L2 LINE L2 3234 3305 -8 266 250 26 0 chr18 33031767 33031843 -53645705 - MER53 DNA DNA -110 79 2 556 194 123 0 chr18 33032021 33032176 -53645372 - MER34B LTR ERV1 0 565 392 849 286 102 18 chr18 33032193 33032574 -53644974 - MER57B LTR ERV1 0 434 22 1380 175 76 50 chr18 33032592 33032934 -53644614 - MER34C LTR ERV1 -191 394 44 706 219 55 38 chr18 33033220 33033458 -53644090 - L1MEc LINE L1 -3525 2690 2449 1717 136 55 107 chr18 33033471 33033503 -53644045 + MER57A LTR ERV1 6 38 -365 2154 104 54 0 chr18 33033503 33033800 -53643748 - AluSp SINE Alu 0 313 1 1717 136 55 107 chr18 33033800 33034144 -53643404 + MER57A LTR ERV1 38 360 -43 1909 112 12 71 chr18 33034144 33034466 -53643082 - AluSx SINE Alu -9 303 1 1717 136 55 107 chr18 33034466 33034508 -53643040 + MER57A LTR ERV1 360 403 0 608 272 57 17 chr18 33034509 33034919 -53642629 - L1MEc LINE L1 -3773 2442 2061 2287 176 143 42 chr18 33034922 33035068 -53642480 - MER67C LTR ERV1 -3 707 577 2176 97 44 0 chr18 33035068 33035366 -53642182 + AluY SINE Alu 1 311 0 2075 114 27 0 chr18 33035371 33035668 -53641880 + AluSp SINE Alu 1 305 -8 2287 176 143 42 chr18 33035668 33036157 -53641391 - MER67C LTR ERV1 -136 574 1 317 183 17 0 chr18 33036176 33036236 -53641312 - MER3 DNA MER1_type -130 79 19 3886 134 43 31 chr18 33036256 33036974 -53640574 + LTR8A LTR ERV1 1 727 0 343 195 35 23 chr18 33036977 33037064 -53640484 - L1MEc LINE L1 -4331 2065 1978 720 274 9 14 chr18 33037353 33037565 -53639983 + LTR33 LTR ERVL 1 211 -310 1267 151 13 4 chr18 33037680 33037905 -53639643 + LTR26E LTR ERV1 1 227 -395 308 336 51 36 chr18 33039259 33039396 -53638152 - L2 LINE L2 -8 3264 3126 2184 145 40 36 chr18 33039590 33039965 -53637583 + MSTB LTR MaLR 1 381 -45 2206 75 11 0 chr18 33039965 33040265 -53637283 + AluSx SINE Alu 1 303 0 2184 145 40 36 chr18 33040265 33040308 -53637240 + MSTB LTR MaLR 381 422 -4 2276 133 9 76 chr18 33040935 33041129 -53636419 + L1PB4 LINE L1 5728 5934 -222 1920 62 4 0 chr18 33041129 33041356 -53636192 + AluSp SINE Alu 78 305 -8 2276 133 9 76 chr18 33041356 33041572 -53635976 + L1PB4 LINE L1 5934 6106 -50 1659 195 14 3 chr18 33041572 33041864 -53635684 + AluJo SINE Alu 1 295 -17 2276 133 9 76 chr18 33041864 33041910 -53635638 + L1PB4 LINE L1 6106 6154 -2 295 294 71 40 chr18 33042036 33042162 -53635386 + L2 LINE L2 3181 3310 -3 1727 201 50 56 chr18 33042465 33043022 -53634526 - L1ME2 LINE L1 -11 6153 5600 203 0 37 0 chr18 33043103 33043130 -53634418 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1697 137 12 16 chr18 33043132 33043387 -53634161 - AluJb SINE Alu -28 284 31 2296 113 0 3 chr18 33044507 33044816 -53632732 + AluSx SINE Alu 1 308 -4 359 265 15 53 chr18 33045213 33045345 -53632203 - MIR SINE MIR -8 254 128 200 305 68 0 chr18 33046118 33046177 -53631371 - MIR3 SINE MIR -6 202 140 261 309 18 18 chr18 33046223 33046333 -53631215 - L3b LINE CR1 -154 1429 1320 192 195 24 24 chr18 33047194 33047235 -53630313 - MIR SINE MIR -194 68 28 1525 287 90 19 chr18 33048134 33048720 -53628828 - MLT2E LTR ERVL 0 628 1 813 139 0 0 chr18 33050160 33050275 -53627273 + FLAM_C SINE Alu 7 121 -22 23 33 0 0 chr18 33050275 33050305 -53627243 + AT_rich Low_complexity Low_complexity 1 30 0 3020 104 21 0 chr18 33051141 33051564 -53625984 + MSTB1 LTR MaLR 1 432 0 2228 128 3 3 chr18 33051955 33052267 -53625281 - AluSx SINE Alu 0 312 1 1850 107 0 4 chr18 33052353 33052596 -53624952 + AluSq SINE Alu 1 242 -71 198 103 0 0 chr18 33052605 33052634 -53624914 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 1738 167 21 10 chr18 33053157 33053445 -53624103 - AluJo SINE Alu -18 294 4 3315 146 16 44 chr18 33053620 33054228 -53623320 + L1MC2 LINE L1 5674 6264 -80 1485 184 0 73 chr18 33056447 33056562 -53620986 + AluJo SINE Alu 1 123 -189 2287 112 3 6 chr18 33056562 33056875 -53620673 - AluSx SINE Alu 0 312 1 1485 184 0 73 chr18 33056875 33057086 -53620462 + AluJo SINE Alu 123 303 -9 24 53 0 0 chr18 33057114 33057152 -53620396 + AT_rich Low_complexity Low_complexity 1 38 0 2254 69 36 13 chr18 33057544 33057848 -53619700 - AluY SINE Alu 0 311 1 237 306 93 0 chr18 33058373 33058481 -53619067 - MIR SINE MIR -26 236 119 321 293 92 5 chr18 33059875 33060042 -53617506 - MIR SINE MIR -3 205 25 1032 177 21 5 chr18 33060079 33060265 -53617283 - MER5A DNA MER1_type 0 189 1 1994 142 50 36 chr18 33060598 33060957 -53616591 + THE1B LTR MaLR 1 364 0 317 239 14 0 chr18 33061181 33061252 -53616296 - L2 LINE L2 0 3272 3201 512 157 10 17 chr18 33061485 33061746 -53615802 + AluJo SINE Alu 17 312 0 298 376 61 25 chr18 33062262 33062703 -53614845 - L2 LINE L2 -527 2787 2331 180 321 73 42 chr18 33063654 33063819 -53613729 - L2 LINE L2 -2892 422 253 1705 179 79 8 chr18 33064970 33065351 -53612197 - Charlie4a DNA MER1_type -87 421 14 1635 229 40 12 chr18 33065569 33065997 -53611551 + L1ME1 LINE L1 5720 6159 -7 293 338 22 7 chr18 33066368 33066504 -53611044 - L3 LINE CR1 -24 1553 1416 369 0 0 0 chr18 33067049 33067090 -53610458 + (CA)n Simple_repeat Simple_repeat 2 42 0 38 22 0 0 chr18 33067105 33067150 -53610398 + AT_rich Low_complexity Low_complexity 1 45 0 6056 82 2 1 chr18 33067646 33068434 -53609114 - L1PA11 LINE L1 -7 6167 5379 1711 57 82 0 chr18 33070838 33071082 -53606466 - L1MA1 LINE L1 0 6302 6039 416 330 65 48 chr18 33071196 33071346 -53606202 + L3 LINE CR1 629 775 -802 2396 101 24 27 chr18 33071346 33071722 -53605826 - THE1C LTR MaLR 0 375 1 416 330 65 48 chr18 33071722 33072159 -53605389 + L3 LINE CR1 775 1226 -351 670 259 32 11 chr18 33072365 33072550 -53604998 - Charlie8 DNA MER1_type -2217 200 12 189 353 18 54 chr18 33072853 33073020 -53604528 - MIR SINE MIR -70 192 32 285 182 0 0 chr18 33073416 33073471 -53604077 + (CA)n Simple_repeat Simple_repeat 2 56 0 777 136 9 4 chr18 33073735 33073963 -53603585 + AluJb SINE Alu 2 311 -1 234 91 0 0 chr18 33074028 33074061 -53603487 + (CA)n Simple_repeat Simple_repeat 2 34 0 286 42 42 0 chr18 33074397 33074445 -53603103 + (TTTTG)n Simple_repeat Simple_repeat 1 50 0 2273 115 0 0 chr18 33077372 33077667 -53599881 + AluSq SINE Alu 1 295 -18 733 289 87 7 chr18 33078194 33078471 -53599077 + MER46C DNA MER2_type 31 329 -9 737 258 5 5 chr18 33078522 33078712 -53598836 - MIR SINE MIR -1 261 72 211 270 80 60 chr18 33079446 33079546 -53598002 - L2 LINE L2 -4 3268 3167 2330 103 3 0 chr18 33079833 33080134 -53597414 - AluSx SINE Alu -10 302 1 2390 115 0 3 chr18 33081900 33082213 -53595335 - AluSx SINE Alu 0 312 1 234 347 118 6 chr18 33082551 33082721 -53594827 - L2 LINE L2 -190 3082 2894 471 260 142 32 chr18 33082757 33083180 -53594368 - MLT1J2 LTR MaLR -12 428 1 394 176 27 0 chr18 33083604 33083678 -53593870 - MER116 DNA Mariner -3 77 2 2169 113 7 3 chr18 33083818 33084111 -53593437 + AluSx SINE Alu 1 294 -18 1812 148 72 43 chr18 33084120 33084465 -53593083 - MLT2D LTR ERVL -59 355 1 1732 180 70 21 chr18 33085404 33085792 -53591756 - MLT1C LTR MaLR -2 465 59 2780 174 41 91 chr18 33085893 33086448 -53591100 + LTR8A LTR ERV1 30 541 -186 1977 166 3 0 chr18 33086448 33086756 -53590792 - AluJo SINE Alu -3 309 1 2780 174 41 91 chr18 33086756 33086935 -53590613 + LTR8A LTR ERV1 541 727 0 180 0 0 0 chr18 33087195 33087215 -53590333 + (TC)n Simple_repeat Simple_repeat 2 21 0 189 74 0 0 chr18 33087218 33087245 -53590303 + (CA)n Simple_repeat Simple_repeat 2 28 0 270 79 0 0 chr18 33087246 33087284 -53590264 + MLT2C1 LTR ERVL 360 397 0 1231 87 29 25 chr18 33087370 33087708 -53589840 + L1PB1 LINE L1 5368 5794 -357 260 73 0 0 chr18 33087695 33087736 -53589812 - L1P5 LINE L1 -360 5791 5751 * 2292 101 9 15 chr18 33087813 33088151 -53589397 + L1PB1 LINE L1 5815 6150 -1 4748 100 26 6 chr18 33088167 33088846 -53588702 + L1MA1 LINE L1 5505 6197 -105 1289 214 206 0 chr18 33089228 33089587 -53587961 + MER63B DNA MER1_type 4 436 0 289 86 259 17 chr18 33090586 33090644 -53586904 + MLT1A1 LTR MaLR 1 72 -293 1235 183 27 5 chr18 33090645 33090864 -53586684 - MER46A DNA MER2_type -4 232 9 1097 176 63 123 chr18 33090866 33091184 -53586364 + MLT1A1 LTR MaLR 67 365 0 564 222 69 7 chr18 33091196 33091340 -53586208 - L1MD3 LINE L1 -10 7985 7833 239 191 0 0 chr18 33091347 33091389 -53586159 - L1MD3 LINE L1 -279 7716 7675 803 222 30 10 chr18 33091390 33091711 -53585837 - MLT1C LTR MaLR 0 467 112 1402 146 45 0 chr18 33091765 33092011 -53585537 - L1MB2 LINE L1 -26 6145 5889 532 258 16 0 chr18 33092013 33092137 -53585411 - MLT1C LTR MaLR -341 126 1 925 186 22 11 chr18 33092138 33092321 -53585227 - L1MC4 LINE L1 -457 7585 7401 995 242 34 18 chr18 33092535 33093028 -53584520 - MER90 LTR ERV1 0 614 40 362 345 15 10 chr18 33093069 33093275 -53584273 - L2 LINE L2 -779 2535 2329 255 143 0 0 chr18 33094060 33094102 -53583446 + L2 LINE L2 3258 3299 -14 335 301 171 48 chr18 33094802 33095217 -53582331 + MLT1K LTR MaLR 123 588 0 23 33 0 0 chr18 33095462 33095492 -53582056 + AT_rich Low_complexity Low_complexity 1 30 0 474 273 8 91 chr18 33095801 33096043 -53581505 + MIR SINE MIR 23 244 -18 1208 198 14 9 chr18 33096329 33096737 -53580811 - MLT1D LTR MaLR 0 505 5 246 192 0 0 chr18 33096751 33096803 -53580745 - L2 LINE L2 0 3313 3262 482 165 20 44 chr18 33096860 33097084 -53580464 + GA-rich Low_complexity Low_complexity 1 218 0 226 271 0 0 chr18 33097084 33097132 -53580416 + polypurine Low_complexity Low_complexity 2 49 0 223 323 0 0 chr18 33097625 33097687 -53579861 + MIR3 SINE MIR 138 199 -9 1463 243 63 25 chr18 33098015 33098460 -53579088 - L1MC/D LINE L1 -1996 5812 5351 993 146 11 11 chr18 33098455 33098633 -53578915 - L1MD1 LINE L1 0 6242 6065 180 0 0 0 chr18 33098714 33098734 -53578814 + (A)n Simple_repeat Simple_repeat 1 20 0 286 229 34 122 chr18 33098769 33098974 -53578574 + L1MDa LINE L1 116 302 -6238 3069 75 41 16 chr18 33099043 33099480 -53578068 - L1PA8 LINE L1 -17 6155 5708 236 353 108 0 chr18 33099785 33099887 -53577661 + L2 LINE L2 3142 3254 -18 21 0 0 0 chr18 33100700 33100721 -53576827 + AT_rich Low_complexity Low_complexity 1 21 0 2064 50 0 0 chr18 33100855 33101096 -53576452 - AluY SINE Alu -2 309 69 1693 151 4 22 chr18 33101423 33101701 -53575847 + AluSx SINE Alu 1 273 -39 219 265 24 114 chr18 33101738 33101949 -53575599 - L2 LINE L2 -404 2910 2719 469 179 24 0 chr18 33102026 33102110 -53575438 + FLAM_A SINE Alu 41 126 -16 249 331 164 35 chr18 33102161 33102472 -53575076 - L2 LINE L2 -783 2531 2181 637 252 0 0 chr18 33102487 33102634 -53574914 - MER3 DNA MER1_type -56 153 7 2402 51 0 3 chr18 33102941 33103236 -53574312 - AluY SINE Alu -15 296 3 300 258 72 93 chr18 33103476 33103670 -53573878 - MIR SINE MIR -32 230 41 204 40 0 0 chr18 33104359 33104384 -53573164 + (CA)n Simple_repeat Simple_repeat 2 26 0 2126 136 46 3 chr18 33109271 33109594 -53567954 + MER1B DNA MER1_type 1 337 0 365 186 0 14 chr18 33111623 33111693 -53565855 + Tigger2 DNA MER2_type 1 69 -2649 * 2403 118 48 36 chr18 33111683 33112124 -53565424 + Tigger2 DNA MER2_type 2273 2718 0 324 0 0 0 chr18 33112238 33112274 -53565274 + (T)n Simple_repeat Simple_repeat 1 36 0 1860 85 0 22 chr18 33112359 33112630 -53564918 + AluY SINE Alu 2 266 -45 896 203 28 56 chr18 33112731 33113017 -53564531 + Tigger2 DNA MER2_type 2429 2706 -12 315 0 0 0 chr18 33113134 33113169 -53564379 + (T)n Simple_repeat Simple_repeat 1 35 0 2561 62 0 3 chr18 33113254 33113562 -53563986 + AluY SINE Alu 2 308 -3 407 233 6 19 chr18 33113678 33113837 -53563711 + GA-rich Low_complexity Low_complexity 3 159 0 21 0 0 0 chr18 33114103 33114124 -53563424 + AT_rich Low_complexity Low_complexity 1 21 0 221 333 88 19 chr18 33114263 33114422 -53563126 - MIR SINE MIR -72 190 21 1075 69 0 0 chr18 33114906 33115037 -53562511 - AluSg SINE Alu -179 131 1 24 53 0 0 chr18 33115158 33115196 -53562352 + AT_rich Low_complexity Low_complexity 1 38 0 228 339 78 17 chr18 33115867 33115982 -53561566 + MIR SINE MIR 23 144 -64 22 56 0 0 chr18 33116059 33116095 -53561453 + AT_rich Low_complexity Low_complexity 1 36 0 655 213 157 20 chr18 33116101 33116401 -53561147 - HAL1 LINE L1 -46 2461 2121 403 292 65 0 chr18 33116663 33116817 -53560731 - HAL1 LINE L1 -764 1743 1580 434 157 0 12 chr18 33116902 33116985 -53560563 + LTR1 LTR ERV1 160 241 -544 318 250 229 29 chr18 33117297 33117537 -53560011 + L2 LINE L2 2824 3111 -202 180 121 30 0 chr18 33117600 33117633 -53559915 + L2 LINE L2 3216 3249 -64 480 289 94 87 chr18 33117654 33118035 -53559513 - HAL1 LINE L1 -1745 762 379 336 281 104 36 chr18 33118183 33118375 -53559173 - HAL1 LINE L1 -2302 205 1 2180 94 34 3 chr18 33118648 33118945 -53558603 + AluSc SINE Alu 4 309 0 200 0 100 0 chr18 33119250 33119280 -53558268 + A-rich Low_complexity Low_complexity 3 35 0 1200 128 0 0 chr18 33119348 33119512 -53558036 + AluSg/x SINE Alu 126 289 -21 1729 192 125 18 chr18 33119665 33120308 -53557240 + L1ME LINE L1 4800 5521 -645 2245 121 0 0 chr18 33120497 33120804 -53556744 - AluSg1 SINE Alu -2 307 1 355 250 0 0 chr18 33121005 33121073 -53556475 - L3 LINE CR1 -3 1574 1507 2378 76 0 0 chr18 33121931 33122219 -53555329 + AluY SINE Alu 1 288 -23 471 378 80 18 chr18 33122648 33122987 -53554561 - L2 LINE L2 -509 2805 2446 366 315 169 14 chr18 33125219 33125438 -53552110 - L3b LINE CR1 -133 1450 1198 252 300 50 12 chr18 33125784 33125864 -53551684 + MER5A DNA MER1_type 51 133 -56 883 219 0 6 chr18 33125866 33126030 -53551518 - FRAM SINE Alu -16 160 1 1367 79 0 6 chr18 33126404 33126581 -53550967 - AluSg/x SINE Alu -47 265 90 1936 135 11 0 chr18 33126997 33127271 -53550277 - AluSx SINE Alu -22 290 14 234 354 0 0 chr18 33127955 33128034 -53549514 - L2 LINE L2 -8 3305 3227 343 263 119 0 chr18 33129240 33129358 -53548190 - MER94 DNA DNA -1 133 2 485 292 112 9 chr18 33129552 33129785 -53547763 + MIR SINE MIR 6 262 0 198 0 0 0 chr18 33133050 33133072 -53544476 + (TGAA)n Simple_repeat Simple_repeat 2 23 0 2577 121 13 43 chr18 33133160 33133677 -53543871 + L1P4 LINE L1 5224 5726 -440 266 281 10 31 chr18 33133877 33133973 -53543575 - MER5A DNA MER1_type -1 188 95 465 263 38 19 chr18 33134248 33134408 -53543140 + LTR67 LTR ERVL 389 551 -6 2381 59 7 0 chr18 33134464 33134751 -53542797 - AluY SINE Alu -22 289 1 2318 75 0 0 chr18 33135461 33135755 -53541793 - AluY SINE Alu -17 294 1 2187 111 9 19 chr18 33137116 33137431 -53540117 - AluSx SINE Alu 0 312 1 670 231 16 16 chr18 33139631 33139817 -53537731 + MER5A DNA MER1_type 1 186 -3 30 69 0 0 chr18 33140166 33140224 -53537324 + AT_rich Low_complexity Low_complexity 1 58 0 311 323 99 22 chr18 33140252 33140484 -53537064 + L1ME1 LINE L1 5003 5252 -894 477 288 104 60 chr18 33140490 33141136 -53536412 + L1ME1 LINE L1 5261 5934 -230 23 0 0 0 chr18 33141498 33141521 -53536027 + AT_rich Low_complexity Low_complexity 1 23 0 227 282 42 28 chr18 33142376 33142447 -53535101 + MIR SINE MIR 28 99 -163 2018 130 33 19 chr18 33143626 33143933 -53533615 - AluJo SINE Alu -1 311 1 626 227 199 14 chr18 33144246 33144664 -53532884 + HAL1 LINE L1 1046 1540 -967 459 269 199 34 chr18 33144714 33145041 -53532507 + HAL1 LINE L1 1988 2368 -139 2390 89 3 0 chr18 33146247 33146551 -53530997 + AluY SINE Alu 1 305 -6 204 275 107 46 chr18 33146942 33147073 -53530475 + MIR3 SINE MIR 58 196 -12 205 427 47 7 chr18 33147435 33147585 -53529963 + L2 LINE L2 3112 3267 -5 748 264 99 63 chr18 33147614 33148077 -53529471 + MLT1J LTR MaLR 32 511 0 2243 113 0 10 chr18 33149161 33149470 -53528078 + AluY SINE Alu 1 306 -5 26 0 0 0 chr18 33150119 33150145 -53527403 + AT_rich Low_complexity Low_complexity 1 26 0 235 269 152 55 chr18 33150833 33150978 -53526570 + MIR3 SINE MIR 18 176 -32 1983 100 25 11 chr18 33151538 33151818 -53525730 + AluSc SINE Alu 14 297 -12 2240 125 8 3 chr18 33151824 33152176 -53525372 + L1PA16 LINE L1 5804 6157 -9 1956 98 3 63 chr18 33152422 33152740 -53524808 + AluSx SINE Alu 1 299 -13 187 309 0 0 chr18 33152793 33152835 -53524713 - L2 LINE L2 -19 3253 3212 464 130 39 0 chr18 33153012 33153089 -53524459 - U6 snRNA snRNA -27 80 1 1929 148 0 3 chr18 33153764 33154061 -53523487 - AluJb SINE Alu -16 296 1 6678 63 65 0 chr18 33154468 33155376 -53522172 - L1PA7 LINE L1 -2 6152 5225 952 214 19 33 chr18 33156358 33156568 -53520980 - MIR SINE MIR -50 212 6 192 205 26 0 chr18 33157312 33157351 -53520197 - MIR SINE MIR -6 256 217 705 214 78 15 chr18 33157445 33157621 -53519927 + MLT1D LTR MaLR 21 184 -283 273 89 0 0 chr18 33157621 33157666 -53519882 + (CA)n Simple_repeat Simple_repeat 1 45 0 705 214 78 15 chr18 33157666 33157875 -53519673 + MLT1D LTR MaLR 184 467 0 352 277 123 101 chr18 33161853 33162228 -53515320 - L3 LINE CR1 -8 1569 1187 236 296 41 31 chr18 33162244 33162342 -53515206 + MIR SINE MIR 37 135 -73 196 367 10 0 chr18 33163376 33163474 -53514074 + L2 LINE L2 2254 2352 -962 198 214 169 22 chr18 33163507 33163596 -53513952 + L2 LINE L2 2290 2391 -923 182 241 172 78 chr18 33164611 33164727 -53512821 + L2 LINE L2 2934 3060 -212 1283 106 142 28 chr18 33165741 33165995 -53511553 + Charlie1 DNA MER1_type 1728 2010 -751 213 353 8 8 chr18 33168270 33168392 -53509156 + G-rich Low_complexity Low_complexity 3 124 0 344 292 162 0 chr18 33168502 33168687 -53508861 - L1MC/D LINE L1 -2220 5588 5374 30 69 0 0 chr18 33169060 33169118 -53508430 + AT_rich Low_complexity Low_complexity 1 58 0 640 237 16 16 chr18 33169467 33169653 -53507895 - MER5A DNA MER1_type -3 186 1 1928 135 3 20 chr18 33171855 33172152 -53505396 + AluJo SINE Alu 1 292 -20 430 144 21 62 chr18 33172364 33172461 -53505087 - MER53 DNA DNA -96 93 1 1005 181 30 10 chr18 33173104 33173303 -53504245 + MER3 DNA MER1_type 1 203 -6 448 296 112 5 chr18 33173411 33173634 -53503914 + MER102a DNA MER1_type 75 321 -9 366 392 0 26 chr18 33173802 33173996 -53503552 + MIR SINE MIR 40 228 -34 1658 193 4 0 chr18 33174035 33174315 -53503233 - AluJb SINE Alu -31 281 1 1369 83 10 63 chr18 33174770 33174975 -53502573 + AluSq SINE Alu 1 194 -119 26 104 0 0 chr18 33175183 33175279 -53502269 + GC_rich Low_complexity Low_complexity 1 96 0 285 299 96 32 chr18 33175948 33176135 -53501413 + MIR SINE MIR 34 232 -30 274 167 28 69 chr18 33176838 33176910 -53500638 + MIR SINE MIR 172 240 -22 230 133 0 0 chr18 33177875 33177920 -53499628 + LTR66 LTR ERVL 395 439 -171 21 57 0 0 chr18 33178086 33178121 -53499427 + AT_rich Low_complexity Low_complexity 1 35 0 466 251 28 73 chr18 33178319 33178498 -53499050 - MIR SINE MIR -78 184 14 2119 101 31 3 chr18 33179096 33179382 -53498166 + AluSg SINE Alu 1 294 -16 2086 128 3 7 chr18 33179759 33180064 -53497484 - AluSx SINE Alu -8 304 1 2139 116 0 3 chr18 33180081 33180404 -53497144 - AluSq SINE Alu 0 322 1 2661 54 34 3 chr18 33180438 33180787 -53496761 + L1PA8 LINE L1 5800 6159 -13 492 18 0 0 chr18 33180923 33180980 -53496568 + (TA)n Simple_repeat Simple_repeat 2 58 0 865 281 16 10 chr18 33181820 33182123 -53495425 - L1ME LINE L1 -495 5675 5371 315 291 192 29 chr18 33182137 33182481 -53495067 + L1M4 LINE L1 3904 4303 -1843 303 270 74 70 chr18 33183117 33183321 -53494227 + L1M4 LINE L1 4300 4507 -1639 1935 166 17 0 chr18 33183321 33183610 -53493938 + AluJb SINE Alu 1 294 -18 303 270 74 70 chr18 33183610 33183675 -53493873 + L1M4 LINE L1 4507 4570 -1576 22 0 0 0 chr18 33184922 33184944 -53492604 + AT_rich Low_complexity Low_complexity 1 22 0 377 300 56 50 chr18 33185794 33185974 -53491574 + HAL1b LINE L1 13 193 -1155 21 89 0 0 chr18 33186118 33186174 -53491374 + AT_rich Low_complexity Low_complexity 1 56 0 494 309 126 39 chr18 33186357 33186522 -53491026 - L1MEc LINE L1 -4613 1697 1548 1985 183 48 97 chr18 33186522 33186621 -53490927 - MER87 LTR ERV1 0 541 439 1612 171 21 18 chr18 33186621 33186902 -53490646 + AluJb SINE Alu 1 282 -30 1985 183 48 97 chr18 33186902 33186918 -53490630 - MER87 LTR ERV1 -102 439 424 183 42 0 0 chr18 33186918 33186942 -53490606 + (GA)n Simple_repeat Simple_repeat 2 25 0 1985 183 48 97 chr18 33186942 33187394 -53490154 - MER87 LTR ERV1 -117 424 1 494 309 126 39 chr18 33187394 33187617 -53489931 - L1MEc LINE L1 -4762 1548 1275 437 210 37 92 chr18 33187622 33187893 -53489655 - L1MEc LINE L1 -4905 1214 959 2024 129 6 22 chr18 33187980 33188291 -53489257 + AluSx SINE Alu 1 306 -6 502 247 112 81 chr18 33188291 33188423 -53489125 + HAL1b LINE L1 266 393 -955 2046 113 12 44 chr18 33188423 33188743 -53488805 + AluSx SINE Alu 1 310 -2 502 247 112 81 chr18 33188743 33188897 -53488651 + HAL1b LINE L1 393 541 -807 2372 97 3 3 chr18 33188897 33189207 -53488341 - AluSx SINE Alu -2 310 1 502 247 112 81 chr18 33189207 33189546 -53488002 + HAL1b LINE L1 541 911 -437 252 239 0 0 chr18 33189736 33189807 -53487741 + L1ME3 LINE L1 6085 6155 -7 336 314 87 44 chr18 33189839 33190068 -53487480 + L1MC/D LINE L1 2489 2727 -3419 306 0 0 0 chr18 33190069 33190103 -53487445 + (TG)n Simple_repeat Simple_repeat 1 34 0 2260 92 0 0 chr18 33190108 33190389 -53487159 - AluY SINE Alu -30 281 1 270 265 27 119 chr18 33190447 33190632 -53486916 + MLT1I LTR MaLR 240 407 -2 315 285 131 60 chr18 33190649 33190710 -53486838 + L1MC/D LINE L1 4801 4856 -1290 2610 137 28 14 chr18 33190710 33191132 -53486416 + MSTA LTR MaLR 1 428 0 315 285 131 60 chr18 33191132 33191522 -53486026 + L1MC/D LINE L1 4856 5284 -862 370 319 56 30 chr18 33191801 33192071 -53485477 + L1MC/D LINE L1 5529 5805 -2003 29 0 0 0 chr18 33193738 33193767 -53483781 + AT_rich Low_complexity Low_complexity 1 29 0 1987 106 67 14 chr18 33193855 33194137 -53483411 - AluSx SINE Alu -15 297 1 1231 168 72 128 chr18 33194891 33195019 -53482529 + LTR37B LTR ERV1 13 147 -321 2186 123 3 0 chr18 33195019 33195321 -53482227 - AluSq SINE Alu -10 303 1 1231 168 72 128 chr18 33195321 33195675 -53481873 + LTR37B LTR ERV1 147 468 0 220 178 22 0 chr18 33195700 33195745 -53481803 + MIR SINE MIR 215 260 -2 228 254 0 28 chr18 33195807 33195878 -53481670 + (CATATA)n Simple_repeat Simple_repeat 4 72 0 198 138 52 0 chr18 33195889 33195947 -53481601 + (TA)n Simple_repeat Simple_repeat 2 62 0 2216 108 3 10 chr18 33195983 33196290 -53481258 + AluSx SINE Alu 1 305 -7 207 100 0 0 chr18 33196852 33196882 -53480666 + (T)n Simple_repeat Simple_repeat 1 30 0 314 230 50 65 chr18 33197505 33197690 -53479858 - L1MC4a LINE L1 -173 5948 5766 217 368 171 7 chr18 33197698 33197850 -53479698 - MER5A DNA MER1_type -10 179 3 2231 113 3 0 chr18 33197916 33198218 -53479330 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr18 33198218 33198239 -53479309 + AT_rich Low_complexity Low_complexity 1 21 0 578 228 75 6 chr18 33198634 33198792 -53478756 + MIR3 SINE MIR 34 205 -3 857 173 0 0 chr18 33198864 33198997 -53478551 - FLAM_A SINE Alu 0 133 1 231 36 0 0 chr18 33199064 33199092 -53478456 + (TA)n Simple_repeat Simple_repeat 2 29 0 459 0 0 0 chr18 33199187 33199238 -53478310 + (TG)n Simple_repeat Simple_repeat 2 52 0 2241 122 0 6 chr18 33199444 33199755 -53477793 + AluSx SINE Alu 1 309 -3 1197 193 23 34 chr18 33200127 33200392 -53477156 + MLT1C LTR MaLR 206 467 0 315 0 0 0 chr18 33200448 33200483 -53477065 + (CA)n Simple_repeat Simple_repeat 1 35 0 1946 116 14 10 chr18 33200891 33201183 -53476365 - L1PA14 LINE L1 -3 6158 5866 2335 89 0 43 chr18 33201923 33202249 -53475299 - AluSx SINE Alu 0 312 1 1638 193 4 0 chr18 33202704 33202984 -53474564 + AluJb SINE Alu 1 281 -31 360 392 0 26 chr18 33203023 33203217 -53474331 - MIR SINE MIR -34 228 40 553 303 113 28 chr18 33203385 33203669 -53473879 - MER102a DNA MER1_type -9 321 14 1101 181 30 10 chr18 33203716 33203915 -53473633 - MER3 DNA MER1_type -6 203 1 478 144 21 62 chr18 33204558 33204655 -53472893 + MER53 DNA DNA 1 93 -96 1908 143 3 10 chr18 33204867 33205161 -53472387 - AluJo SINE Alu -20 292 1 2277 119 6 0 chr18 33205171 33205482 -53472066 - AluSq SINE Alu 0 313 1 329 305 54 30 chr18 33205546 33205713 -53471835 - MIR SINE MIR -57 205 35 1989 103 14 14 chr18 33206454 33206763 -53470785 + AluSx SINE Alu 1 309 0 471 181 48 0 chr18 33206763 33206868 -53470680 + L1ME2 LINE L1 5696 5805 -357 564 207 106 80 chr18 33206943 33207131 -53470417 + L1ME2 LINE L1 5963 6155 -9 21 36 0 0 chr18 33207150 33207178 -53470370 + AT_rich Low_complexity Low_complexity 1 28 0 2423 64 7 3 chr18 33207306 33207604 -53469944 + AluSp SINE Alu 1 299 -14 1238 138 64 5 chr18 33207806 33208009 -53469539 + MER20 DNA MER1_type 3 217 -2 1083 106 0 183 chr18 33208528 33208763 -53468785 + 7SK RNA RNA 2 193 0 3783 175 7 63 chr18 33209148 33209880 -53467668 - LTR8 LTR ERV1 0 691 1 533 288 49 47 chr18 33210411 33210776 -53466772 - MER65A LTR ERV1 0 445 80 1446 56 0 11 chr18 33210804 33210984 -53466564 + L1PA6 LINE L1 5977 6154 0 2435 192 23 7 chr18 33211107 33211514 -53466034 + MLT2C2 LTR ERVL 16 432 -32 279 79 0 0 chr18 33211514 33211552 -53465996 + (TG)n Simple_repeat Simple_repeat 1 38 0 2435 192 23 7 chr18 33211552 33211586 -53465962 + MLT2C2 LTR ERVL 432 464 0 566 267 151 22 chr18 33211587 33211905 -53465643 + L1MC4a LINE L1 5577 5935 -1873 261 235 24 24 chr18 33212856 33212941 -53464607 - MIR SINE MIR -41 221 137 237 33 0 0 chr18 33213580 33213610 -53463938 + (CACCC)n Simple_repeat Simple_repeat 5 34 0 21 0 0 0 chr18 33216096 33216117 -53461431 + AT_rich Low_complexity Low_complexity 1 21 0 2629 37 3 0 chr18 33216156 33216456 -53461092 + AluY SINE Alu 1 301 -10 261 277 0 0 chr18 33217051 33217116 -53460432 + AluJ/monomer SINE Alu 236 300 0 2162 106 0 7 chr18 33218140 33218448 -53459100 + AluSx SINE Alu 1 306 0 3331 70 32 5 chr18 33218694 33219125 -53458423 - L1PA13 LINE L1 -2 6161 5719 689 308 145 9 chr18 33219286 33219714 -53457834 + L2 LINE L2 2828 3313 0 534 336 69 0 chr18 33219805 33220022 -53457526 + MIR SINE MIR 3 234 -28 240 35 0 0 chr18 33220068 33220097 -53457451 + (TG)n Simple_repeat Simple_repeat 1 29 0 263 327 93 9 chr18 33220382 33220489 -53457059 + MER5A DNA MER1_type 72 187 -2 13045 153 21 18 chr18 33221665 33222085 -53455463 + L1MA9 LINE L1 2915 3333 -2979 1809 148 62 7 chr18 33222085 33222376 -53455172 + AluJb SINE Alu 1 307 -5 13045 153 21 18 chr18 33222376 33224843 -53452705 + L1MA9 LINE L1 3333 5817 -495 2296 74 34 0 chr18 33224843 33225140 -53452408 + AluYa5 SINE Alu 1 307 -4 13045 153 21 18 chr18 33225140 33225638 -53451910 + L1MA9 LINE L1 5817 6312 0 782 181 8 0 chr18 33225685 33225812 -53451736 - FLAM_C SINE Alu -4 129 2 331 360 110 18 chr18 33225858 33226241 -53451307 + L1 LINE L1 3747 4164 -1982 26 30 0 0 chr18 33226991 33227024 -53450524 + AT_rich Low_complexity Low_complexity 1 33 0 203 0 0 36 chr18 33227180 33227208 -53450340 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2036 138 0 0 chr18 33227210 33227492 -53450056 - AluJo SINE Alu -30 282 1 2222 107 3 0 chr18 33227523 33227812 -53449736 - AluSx SINE Alu -22 290 1 3303 148 9 9 chr18 33228480 33229027 -53448521 + LTR10A LTR ERV1 1 547 -62 484 267 30 15 chr18 33229497 33229632 -53447916 - MER5B DNA MER1_type 0 178 42 2957 191 78 15 chr18 33229687 33230290 -53447258 - LTR9B LTR ERV1 0 644 4 1397 193 42 9 chr18 33230293 33230572 -53446976 - HUERS-P3 LTR ERV1 0 8919 8304 1756 120 53 60 chr18 33230572 33230872 -53446676 + AluSx SINE Alu 1 298 -14 387 170 9 80 chr18 33231164 33231276 -53446272 - LTR9B-int LTR ERV1 -2443 4125 2469 * 9048 188 50 43 chr18 33231272 33232455 -53445093 - LTR9B-int LTR ERV1 -5478 1940 767 2373 103 3 0 chr18 33232455 33232765 -53444783 + AluSp SINE Alu 1 311 -2 9048 188 50 43 chr18 33232765 33233062 -53444486 - LTR9B-int LTR ERV1 -6651 767 474 2374 97 0 0 chr18 33233062 33233373 -53444175 + AluSq SINE Alu 1 311 -2 9048 188 50 43 chr18 33233373 33233815 -53443733 - LTR9B-int LTR ERV1 -6944 474 3 2581 207 83 26 chr18 33233817 33234421 -53443127 - LTR9B LTR ERV1 0 644 7 3767 98 5 72 chr18 33234428 33235038 -53442510 + MER4B LTR ERV1 42 610 0 2634 226 84 48 chr18 33235175 33235520 -53442028 - MER21B LTR ERV1 -41 822 491 1666 200 3 16 chr18 33235520 33235835 -53441713 - AluJo SINE Alu -1 311 1 2634 226 84 48 chr18 33235835 33236258 -53441290 - MER21B LTR ERV1 -372 491 26 410 183 17 108 chr18 33236257 33236377 -53441171 - MER21B LTR ERV1 -754 109 1 * 7022 179 25 7 chr18 33237533 33238913 -53438635 - L1P LINE L1 -2028 4118 2713 448 128 13 13 chr18 33238906 33238984 -53438564 + L1P4 LINE L1 5348 5425 -740 * 492 114 0 0 chr18 33238975 33239045 -53438503 + L1P4 LINE L1 5718 5787 -378 1504 123 0 9 chr18 33239047 33239267 -53438281 + AluSq SINE Alu 3 220 -93 651 226 141 71 chr18 33239862 33240048 -53437500 + MER39 LTR ERV1 1 173 -534 4897 64 9 0 chr18 33240048 33240630 -53436918 + LTR10C LTR ERV1 5 591 0 651 226 141 71 chr18 33240630 33240730 -53436818 + MER39 LTR ERV1 173 476 -231 268 254 45 37 chr18 33240730 33240864 -53436684 + MER65B LTR ERV1 3 137 -394 239 227 30 0 chr18 33241002 33241068 -53436480 + MER65B LTR ERV1 314 381 -150 815 191 71 31 chr18 33241214 33241439 -53436109 + MER39 LTR ERV1 474 707 0 606 200 227 0 chr18 33241829 33241979 -53435569 - MER5A DNA MER1_type 0 189 6 962 196 57 148 chr18 33242319 33242636 -53434912 + LTR8 LTR ERV1 1 256 -435 1410 192 61 76 chr18 33242671 33243129 -53434419 + LTR8A LTR ERV1 277 727 0 881 142 0 83 chr18 33243278 33243447 -53434101 + MLT1E3 LTR MaLR 470 624 0 535 275 111 14 chr18 33243447 33243807 -53433741 - L1ME LINE L1 -5120 1085 691 698 336 39 3 chr18 33244280 33244592 -53432956 - L1ME LINE L1 -6047 349 27 3372 168 29 4 chr18 33244606 33245167 -53432381 - L1MB1 LINE L1 -7 6161 5587 1040 201 32 8 chr18 33245180 33245429 -53432119 + L1MA8 LINE L1 5096 5350 -796 1756 142 4 0 chr18 33246243 33246510 -53431038 + L1PA13 LINE L1 5896 6163 0 5109 133 31 8 chr18 33248296 33248909 -53428639 + L1MA8 LINE L1 5466 6104 -187 2436 149 65 26 chr18 33248909 33249325 -53428223 - Tigger2a DNA MER2_type -2 432 1 5109 133 31 8 chr18 33249325 33249515 -53428033 + L1MA8 LINE L1 6104 6288 -3 21 0 0 0 chr18 33249516 33249537 -53428011 + AT_rich Low_complexity Low_complexity 1 21 0 434 288 46 13 chr18 33249731 33249884 -53427664 - MER110 LTR ERV1 -42 449 292 334 246 36 0 chr18 33249918 33250056 -53427492 + (TA)n Simple_repeat Simple_repeat 1 143 0 1860 163 137 16 chr18 33250325 33250705 -53426843 - MSTC LTR MaLR -2 426 1 231 307 114 0 chr18 33251727 33251815 -53425733 - MIR SINE MIR -64 144 47 2341 92 3 0 chr18 33251836 33252131 -53425417 - AluSg SINE Alu -14 296 1 306 0 0 0 chr18 33252442 33252476 -53425072 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 2177 109 7 3 chr18 33253411 33253734 -53423814 - AluSx SINE Alu 0 312 1 26 30 0 0 chr18 33253983 33254016 -53423532 + AT_rich Low_complexity Low_complexity 1 33 0 300 120 0 0 chr18 33255939 33255989 -53421559 + (A)n Simple_repeat Simple_repeat 1 50 0 907 110 0 29 chr18 33257745 33257881 -53419667 + FLAM_C SINE Alu 1 132 -1 189 121 0 0 chr18 33258478 33258511 -53419037 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 190 362 38 9 chr18 33258654 33258759 -53418789 + L2 LINE L2 2653 2760 -554 822 246 97 78 chr18 33259585 33259955 -53417593 - MLT1K LTR MaLR -68 520 144 2234 107 7 0 chr18 33260201 33260500 -53417048 + AluSq SINE Alu 4 304 -9 1933 148 30 7 chr18 33261033 33261336 -53416212 - AluSx SINE Alu -2 310 1 2092 157 26 31 chr18 33261753 33262142 -53415406 - MLT1B LTR MaLR 0 390 4 584 308 50 13 chr18 33262153 33262576 -53414972 - MLT1K LTR MaLR -28 560 96 417 208 89 0 chr18 33262583 33262684 -53414864 + MIR SINE MIR 2 111 -151 2457 73 0 28 chr18 33262780 33263097 -53414451 - AluY SINE Alu -3 308 1 349 261 61 9 chr18 33263236 33263351 -53414197 - MLT1L LTR MaLR 0 615 495 384 219 14 0 chr18 33263565 33263638 -53413910 - MLT1L LTR MaLR -402 213 140 3988 122 5 2 chr18 33263985 33264557 -53412991 + MER39B LTR ERV1 1 574 -79 1126 207 70 57 chr18 33264580 33264880 -53412668 - MLT1F1 LTR MaLR -263 304 1 209 33 33 0 chr18 33265150 33265180 -53412368 + (TTCC)n Simple_repeat Simple_repeat 2 32 0 1939 186 70 20 chr18 33265637 33266446 -53411102 + L1MC2 LINE L1 4762 5607 -737 * 5643 108 22 19 chr18 33266445 33267118 -53410430 + L1PA16 LINE L1 5302 5980 -186 2511 89 0 0 chr18 33267118 33267421 -53410127 + AluSg SINE Alu 1 303 -7 5643 108 22 19 chr18 33267421 33267609 -53409939 + L1PA16 LINE L1 5980 6166 0 3312 130 28 65 chr18 33267604 33267866 -53409682 + L1MC2 LINE L1 5595 5865 -479 * 2294 96 3 10 chr18 33267866 33268168 -53409380 + AluSq SINE Alu 1 300 -13 3312 130 28 65 chr18 33268168 33268552 -53408996 + L1MC2 LINE L1 5865 6217 -127 202 258 0 16 chr18 33268660 33268722 -53408826 - MER5A DNA MER1_type 0 189 129 2069 107 120 0 chr18 33268726 33269035 -53408513 + L1PB1 LINE L1 5801 6146 -5 279 291 58 0 chr18 33269065 33269151 -53408397 - MER5A DNA MER1_type -49 140 50 244 370 92 8 chr18 33269454 33269573 -53407975 + L2 LINE L2 3136 3264 -8 2226 120 0 9 chr18 33270103 33270419 -53407129 + AluSq SINE Alu 1 313 0 229 222 22 0 chr18 33270622 33270667 -53406881 - MER46C DNA MER2_type 0 338 293 198 103 0 0 chr18 33270973 33271002 -53406546 + (CA)n Simple_repeat Simple_repeat 2 30 0 213 200 0 0 chr18 33271700 33271740 -53405808 + CT-rich Low_complexity Low_complexity 1 40 0 2703 234 52 35 chr18 33271841 33272624 -53404924 + L1ME1 LINE L1 5365 6161 -5 1612 217 23 40 chr18 33272893 33273290 -53404258 + MLT1B LTR MaLR 1 390 0 2711 26 0 3 chr18 33273469 33273771 -53403777 + AluY SINE Alu 1 301 -10 2101 70 19 0 chr18 33274033 33274291 -53403257 - AluY SINE Alu -48 263 1 23 0 0 0 chr18 33274300 33274323 -53403225 + AT_rich Low_complexity Low_complexity 1 23 0 740 134 57 167 chr18 33275355 33275451 -53402097 - MER20 DNA MER1_type 0 219 114 2454 75 3 3 chr18 33275451 33275757 -53401791 - AluY SINE Alu -5 306 1 740 134 57 167 chr18 33275757 33275906 -53401642 - MER20 DNA MER1_type -105 114 1 1291 222 12 34 chr18 33275932 33276256 -53401292 + L1ME2 LINE L1 5827 6143 -21 624 290 96 20 chr18 33276595 33276888 -53400660 + L2 LINE L2 2994 3308 -5 228 247 123 0 chr18 33277589 33277662 -53399886 + MIR SINE MIR 2 83 -179 4240 122 21 11 chr18 33277662 33278316 -53399232 + MER50 LTR ERV1 1 661 -73 294 59 0 0 chr18 33278316 33278350 -53399198 + MER50-int LTR ERV1 9 42 -7163 720 200 25 44 chr18 33278351 33278511 -53399037 + MIR SINE MIR 79 235 -27 2374 100 0 0 chr18 33278584 33278884 -53398664 + AluSq SINE Alu 1 300 -13 619 128 80 64 chr18 33279437 33279562 -53397986 + MLT1B LTR MaLR 1 127 -263 1077 203 37 25 chr18 33279764 33280005 -53397543 + MLT1B LTR MaLR 147 390 0 859 78 16 0 chr18 33282095 33282224 -53395324 + (GGA)n Simple_repeat Simple_repeat 2 132 0 1227 112 16 5 chr18 33282735 33282923 -53394625 - AluSq SINE Alu -4 309 120 2108 121 3 3 chr18 33282933 33283230 -53394318 - AluSg SINE Alu -8 302 6 1241 126 5 0 chr18 33283572 33283762 -53393786 - MER72 LTR ERV1 -4 718 528 2064 154 51 0 chr18 33283809 33284140 -53393408 - MER72 LTR ERV1 -191 531 184 624 211 0 0 chr18 33284140 33284254 -53393294 + FLAM_C SINE Alu 2 115 -28 39 50 0 0 chr18 33284256 33284316 -53393232 + AT_rich Low_complexity Low_complexity 1 60 0 1120 192 5 10 chr18 33284319 33284517 -53393031 - MER72 LTR ERV1 -523 199 3 247 294 24 26 chr18 33284734 33284823 -53392725 + MIR SINE MIR 10 98 -110 27 62 0 0 chr18 33284913 33284961 -53392587 + AT_rich Low_complexity Low_complexity 1 48 0 2895 167 106 23 chr18 33285561 33286214 -53391334 - MER39 LTR ERV1 0 707 1 24 53 0 0 chr18 33286320 33286358 -53391190 + AT_rich Low_complexity Low_complexity 1 38 0 2329 69 45 0 chr18 33286498 33286788 -53390760 - AluY SINE Alu -8 303 1 849 129 0 50 chr18 33287207 33287347 -53390201 + FLAM_C SINE Alu 1 133 0 1569 69 37 9 chr18 33287473 33287689 -53389859 + MLT2A1 LTR ERVL 1 222 -222 7076 56 1 14 chr18 33287696 33288087 -53389461 + HERVL LTR ERVL 2954 3348 -2306 2484 71 0 16 chr18 33288087 33288395 -53389153 + AluY SINE Alu 1 303 -8 7076 56 1 14 chr18 33288395 33288873 -53388675 + HERVL LTR ERVL 3348 3812 -1842 2192 82 40 40 chr18 33288873 33289271 -53388277 + MLT2A1 LTR ERVL 81 453 0 800 161 0 0 chr18 33289318 33289436 -53388112 + FLAM_C SINE Alu 1 118 -25 181 344 33 20 chr18 33291988 33292139 -53385409 + MER5A DNA MER1_type 13 165 -24 2640 72 125 5 chr18 33292218 33292618 -53384930 + LTR7 LTR ERV1 1 448 -2 20466 98 64 24 chr18 33292620 33295780 -53381768 + HERVH LTR ERV1 1 3288 -4425 8896 99 3 6 chr18 33295772 33297497 -53380051 + HERVH LTR ERV1 3492 5273 -1818 * 1395 120 23 9 chr18 33297498 33297715 -53379833 + HERVH LTR ERV1 5600 5819 -1894 * 2338 111 48 13 chr18 33297713 33298092 -53379456 + HERVH LTR ERV1 7322 7713 0 2557 85 125 8 chr18 33298092 33298493 -53379055 + LTR7 LTR ERV1 1 448 -2 2218 103 3 0 chr18 33298561 33298894 -53378654 + AluSx SINE Alu 1 334 0 6020 132 17 30 chr18 33298936 33299918 -53377630 + LTR5 LTR ERVK 1 969 0 231 114 0 0 chr18 33300388 33300423 -53377125 + (TG)n Simple_repeat Simple_repeat 1 35 0 7439 43 1 3 chr18 33300709 33302058 -53375490 + L1PA5 LINE L1 4808 6154 0 24 32 0 0 chr18 33302063 33302094 -53375454 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr18 33302444 33302472 -53375076 + AT_rich Low_complexity Low_complexity 1 28 0 743 248 38 25 chr18 33303096 33303334 -53374214 + LTR40a LTR ERVL 1 241 -278 192 77 0 0 chr18 33303778 33303804 -53373744 + (T)n Simple_repeat Simple_repeat 1 26 0 2430 91 0 0 chr18 33304040 33304347 -53373201 - AluY SINE Alu -4 307 1 2253 107 0 0 chr18 33304376 33304674 -53372874 + AluSg SINE Alu 1 298 -12 3154 48 14 14 chr18 33304684 33305097 -53372451 + L1PA7 LINE L1 5742 6154 0 247 342 92 26 chr18 33305245 33305397 -53372151 - L2 LINE L2 0 3272 3111 409 259 80 6 chr18 33305424 33305586 -53371962 - MLT1J LTR MaLR -44 467 294 183 280 147 13 chr18 33305998 33306073 -53371475 - L2 LINE L2 -4 3309 3225 1810 170 45 84 chr18 33306174 33306742 -53370806 - LTR24B LTR ERV1 0 532 1 531 329 29 5 chr18 33306832 33307042 -53370506 - MIR SINE MIR -11 251 37 2203 124 24 32 chr18 33307099 33307477 -53370071 - THE1C LTR MaLR 0 375 1 698 192 89 115 chr18 33307626 33307852 -53369696 + MER34C LTR ERV1 45 258 -327 2713 93 3 3 chr18 33307852 33308227 -53369321 + THE1C LTR MaLR 1 375 0 698 192 89 115 chr18 33308227 33308391 -53369157 + MER34C LTR ERV1 258 425 -160 606 248 46 13 chr18 33308712 33308865 -53368683 + MER58B DNA MER1_type 183 340 -1 21 36 0 0 chr18 33309176 33309204 -53368344 + AT_rich Low_complexity Low_complexity 1 28 0 2247 123 0 0 chr18 33309252 33309560 -53367988 + AluSq SINE Alu 1 308 -5 207 0 0 0 chr18 33309628 33309651 -53367897 + (T)n Simple_repeat Simple_repeat 1 23 0 2412 93 0 0 chr18 33309795 33310096 -53367452 + AluSg SINE Alu 1 301 -9 2171 117 10 0 chr18 33310759 33311057 -53366491 + AluSq SINE Alu 1 301 -12 213 250 16 16 chr18 33311224 33311288 -53366260 + (TATG)n Simple_repeat Simple_repeat 3 66 0 727 192 0 0 chr18 33311577 33311702 -53365846 + FLAM_C SINE Alu 1 125 -8 2463 56 0 13 chr18 33311707 33312009 -53365539 - AluY SINE Alu -13 298 1 604 240 210 9 chr18 33312091 33312420 -53365128 + L1MC4 LINE L1 7437 7831 -211 2352 79 10 13 chr18 33312429 33312733 -53364815 + AluSp SINE Alu 1 303 -10 2147 104 10 0 chr18 33312843 33313132 -53364416 - AluSx SINE Alu -20 292 1 419 159 372 0 chr18 33313427 33313540 -53364008 + AluSg1 SINE Alu 5 159 -150 1514 199 214 77 chr18 33313545 33314219 -53363329 + LTR19C LTR ERV1 7 772 -7 1005 138 0 0 chr18 33314224 33314362 -53363186 + AluJb SINE Alu 155 292 -20 669 186 9 9 chr18 33314811 33314924 -53362624 + FLAM_A SINE Alu 2 114 -19 4909 147 27 24 chr18 33315324 33316225 -53361323 - MER4D LTR ERV1 0 903 1 2014 159 0 0 chr18 33316326 33316627 -53360921 + AluSx SINE Alu 1 301 -11 3060 146 71 4 chr18 33316652 33317171 -53360377 + MER41C LTR ERV1 1 554 0 3937 98 19 53 chr18 33317467 33318069 -53359479 - LTR9B LTR ERV1 0 644 65 1159 65 0 7 chr18 33318069 33318223 -53359325 + L1PA6 LINE L1 6002 6154 0 3937 98 19 53 chr18 33318223 33318286 -53359262 - LTR9B LTR ERV1 -579 65 1 2118 196 101 19 chr18 33318286 33318569 -53358979 + LTR48B LTR ERV1 4 262 -382 2130 95 190 36 chr18 33318569 33318959 -53358589 - LTR7 LTR ERV1 0 450 1 2118 196 101 19 chr18 33318959 33319267 -53358281 + LTR48B LTR ERV1 262 644 0 412 214 18 36 chr18 33319273 33319385 -53358163 - MER94 DNA DNA -23 111 2 207 320 63 25 chr18 33319879 33320015 -53357533 + MER5B DNA MER1_type 49 178 0 2875 189 121 22 chr18 33320111 33320266 -53357282 + MER63C DNA MER1_type 1 139 -921 2503 37 0 3 chr18 33320266 33320562 -53356986 - AluY SINE Alu -16 295 1 2875 189 121 22 chr18 33320562 33321190 -53356358 + MER63C DNA MER1_type 139 862 -68 2169 106 14 0 chr18 33322971 33323263 -53354285 + AluSx SINE Alu 1 296 -16 536 248 0 32 chr18 33323609 33323766 -53353782 + MER46C DNA MER2_type 187 338 0 25 31 0 0 chr18 33324231 33324263 -53353285 + AT_rich Low_complexity Low_complexity 1 32 0 196 323 112 31 chr18 33325247 33325470 -53352078 + L2 LINE L2 2395 2635 -679 737 171 32 91 chr18 33325498 33325622 -53351926 - MER5A DNA MER1_type -3 186 75 2424 92 3 0 chr18 33325622 33325928 -53351620 + AluY SINE Alu 1 307 -4 737 171 32 91 chr18 33325928 33325990 -53351558 - MER5A DNA MER1_type -114 75 11 2093 102 10 10 chr18 33325990 33326311 -53351237 - AluSq SINE Alu 0 321 1 510 228 55 28 chr18 33326465 33326610 -53350938 + MIR SINE MIR 113 261 -1 333 306 84 34 chr18 33327268 33327591 -53349957 + L2 LINE L2 649 987 -2327 298 242 32 32 chr18 33327898 33327993 -53349555 + MLT1H LTR MaLR 439 533 -16 401 310 99 0 chr18 33328021 33328163 -53349385 - MER5B DNA MER1_type -20 158 3 519 219 6 131 chr18 33328535 33328660 -53348888 + MER5B DNA MER1_type 7 109 -69 2661 33 0 3 chr18 33328660 33328962 -53348586 - AluY SINE Alu -10 301 1 519 219 6 131 chr18 33328962 33328996 -53348552 + MER5B DNA MER1_type 109 146 -32 281 277 0 44 chr18 33329100 33329214 -53348334 + L1M1 LINE L1 5466 5574 -590 397 233 98 84 chr18 33329228 33329315 -53348233 + L1ME3A LINE L1 5652 5736 -434 1885 140 16 29 chr18 33329315 33329630 -53347918 + AluSx SINE Alu 1 311 -1 397 233 98 84 chr18 33329630 33329817 -53347731 + L1ME3A LINE L1 5736 5930 -240 21 57 0 0 chr18 33329851 33329886 -53347662 + AT_rich Low_complexity Low_complexity 1 35 0 1011 150 0 0 chr18 33329888 33330035 -53347513 - FRAM SINE Alu -30 146 1 356 363 63 39 chr18 33330411 33330871 -53346677 + L2 LINE L2 1752 2222 -1092 394 329 82 0 chr18 33331577 33331747 -53345801 + MIR SINE MIR 34 217 -45 1993 142 7 0 chr18 33331976 33332264 -53345284 + AluSx SINE Alu 1 290 -22 234 160 0 0 chr18 33332274 33332324 -53345224 + GA-rich Low_complexity Low_complexity 3 52 0 930 238 42 0 chr18 33332462 33332676 -53344872 + MER58A DNA MER1_type 1 223 -1 26 50 0 0 chr18 33333242 33333282 -53344266 + AT_rich Low_complexity Low_complexity 1 40 0 27 0 0 0 chr18 33333769 33333796 -53343752 + AT_rich Low_complexity Low_complexity 1 27 0 762 200 0 0 chr18 33333810 33333935 -53343613 - FLAM_A SINE Alu -8 125 1 970 161 88 19 chr18 33334573 33334778 -53342770 + MER46A DNA MER2_type 17 235 -1 229 383 11 0 chr18 33335555 33335649 -53341899 - L2 LINE L2 -1 3271 3177 189 258 65 16 chr18 33335803 33335865 -53341683 + MIR SINE MIR 128 192 -70 683 214 7 7 chr18 33335901 33336046 -53341502 - L1MC4a LINE L1 -956 6852 6708 781 196 122 68 chr18 33336077 33336413 -53341135 + L1ME3A LINE L1 5817 6170 0 628 110 0 0 chr18 33336554 33336645 -53340903 + AluSc SINE Alu 218 308 -1 622 184 258 4 chr18 33336648 33336881 -53340667 + L1MC4 LINE L1 7251 7542 -500 325 26 14 12 chr18 33336881 33337109 -53340439 + AluY SINE Alu 1 311 0 1378 215 32 67 chr18 33337109 33337635 -53339913 + L1MC4 LINE L1 7535 8042 0 2068 129 0 16 chr18 33338192 33338509 -53339039 + AluJb SINE Alu 1 312 0 597 171 143 0 chr18 33339388 33339528 -53338020 - MER5C DNA MER1_type -164 160 1 239 284 51 60 chr18 33340822 33341192 -53336356 + L1MC5 LINE L1 7541 7907 -54 1679 150 38 31 chr18 33341859 33342152 -53335396 - AluJb SINE Alu -17 295 1 21 57 0 0 chr18 33342544 33342579 -53334969 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr18 33342790 33342827 -53334721 + AT_rich Low_complexity Low_complexity 1 37 0 256 321 85 36 chr18 33343099 33343264 -53334284 + MER5A DNA MER1_type 1 173 -16 * 357 323 10 0 chr18 33343241 33343337 -53334211 + MER5A DNA MER1_type 10 106 -83 801 150 0 50 chr18 33343417 33343557 -53333991 - FLAM_C SINE Alu 0 133 1 183 80 0 0 chr18 33343668 33343693 -53333855 + (ATATG)n Simple_repeat Simple_repeat 1 25 0 1805 150 14 24 chr18 33343958 33344251 -53333297 + AluJb SINE Alu 1 290 -22 222 250 0 0 chr18 33344755 33344803 -53332745 + (TA)n Simple_repeat Simple_repeat 2 49 0 2134 116 0 0 chr18 33345164 33345468 -53332080 - AluSx SINE Alu 0 304 1 2205 67 18 7 chr18 33346587 33346871 -53330677 + AluSq SINE Alu 1 287 -26 1917 113 74 0 chr18 33347008 33347291 -53330257 - AluSq SINE Alu -9 304 1 1349 147 14 61 chr18 33347291 33347486 -53330062 - MER4E LTR ERV1 -500 279 101 2312 75 7 10 chr18 33347486 33347780 -53329768 - AluSg SINE Alu -17 293 1 1349 147 14 61 chr18 33347780 33347877 -53329671 - MER4E LTR ERV1 -678 101 1 773 165 8 15 chr18 33348029 33348162 -53329386 + FLAM_C SINE Alu 1 132 -1 1668 173 22 22 chr18 33348206 33348575 -53328973 + L1MB7 LINE L1 5806 6174 -10 1008 153 156 42 chr18 33348828 33349135 -53328413 + MER4A LTR ERV1 1 342 -322 430 149 208 51 chr18 33349142 33349378 -53328170 + MER4C LTR ERV1 159 436 -29 319 305 68 0 chr18 33349501 33349619 -53327929 + Charlie2 DNA MER1_type 273 398 -2384 * 334 203 38 0 chr18 33349618 33349697 -53327851 + Charlie2 DNA MER1_type 2012 2093 -769 297 0 0 0 chr18 33350374 33350407 -53327141 + (CCCCCG)n Simple_repeat Simple_repeat 4 36 0 35 24 0 0 chr18 33350825 33350867 -53326681 + GC_rich Low_complexity Low_complexity 1 42 0 213 59 29 0 chr18 33352227 33352261 -53325287 + (TTTA)n Simple_repeat Simple_repeat 2 176 0 2277 84 0 0 chr18 33352261 33352545 -53325003 - AluSp SINE Alu 0 318 1 248 333 142 0 chr18 33352688 33352808 -53324740 - MIR SINE MIR -111 151 15 258 182 0 18 chr18 33352854 33352909 -53324639 - MER33 DNA MER1_type 0 324 271 1790 57 0 0 chr18 33352909 33353121 -53324427 + AluSg SINE Alu 1 212 -98 1430 141 29 32 chr18 33353169 33353218 -53324330 - MER33 DNA MER1_type -2307 278 230 2236 68 34 3 chr18 33353218 33353511 -53324037 - AluSg SINE Alu -8 302 1 1430 141 29 32 chr18 33353511 33353738 -53323810 - MER33 DNA MER1_type -2355 230 3 1281 161 0 67 chr18 33353807 33354062 -53323486 - AluJb SINE Alu -3 309 72 2344 79 0 13 chr18 33354601 33354905 -53322643 - AluSc SINE Alu -8 301 2 218 106 43 21 chr18 33355311 33355358 -53322190 + (TTAAA)n Simple_repeat Simple_repeat 5 52 0 2011 141 7 0 chr18 33355704 33356003 -53321545 + AluSx SINE Alu 1 301 -11 607 90 0 0 chr18 33356094 33356172 -53321376 - U6 snRNA snRNA -28 79 2 1411 201 32 3 chr18 33356173 33356457 -53321091 - AluJb SINE Alu -20 292 1 2186 105 3 13 chr18 33356463 33356777 -53320771 - AluY SINE Alu 0 311 1 1984 107 3 48 chr18 33356779 33356951 -53320597 - AluSx SINE Alu -16 296 143 2390 89 0 3 chr18 33356951 33357254 -53320294 - AluSq SINE Alu -11 302 1 1984 107 3 48 chr18 33357254 33357391 -53320157 - AluSx SINE Alu -169 143 1 402 119 0 45 chr18 33357395 33357462 -53320086 - FLAM SINE Alu -16 127 64 1858 139 4 0 chr18 33358220 33358520 -53319028 - AluJb SINE Alu 0 301 1 1950 136 7 10 chr18 33358636 33358945 -53318603 - AluJb SINE Alu -4 308 1 225 217 94 28 chr18 33359023 33359129 -53318419 - L1MC4a LINE L1 -1622 6186 6074 2169 98 3 20 chr18 33359618 33359924 -53317624 - AluSx SINE Alu -11 301 1 466 261 114 25 chr18 33359956 33360236 -53317312 - L1MC4a LINE L1 -1742 6066 5762 326 191 0 16 chr18 33360238 33360301 -53317247 - AluJb SINE Alu -121 181 120 362 154 0 0 chr18 33360425 33360477 -53317071 - Alu SINE Alu -256 52 1 183 80 0 0 chr18 33360588 33360613 -53316935 + (ATATG)n Simple_repeat Simple_repeat 1 25 0 1775 158 14 4 chr18 33360878 33361157 -53316391 + AluJb SINE Alu 1 282 -30 222 250 0 0 chr18 33361675 33361723 -53315825 + (TA)n Simple_repeat Simple_repeat 2 49 0 2132 113 0 0 chr18 33362084 33362386 -53315162 - AluSx SINE Alu 0 304 3 2479 56 10 3 chr18 33363507 33363811 -53313737 + AluY SINE Alu 1 306 -5 1137 88 0 14 chr18 33363823 33363970 -53313578 + AluSg/x SINE Alu 86 230 -82 1290 143 14 14 chr18 33364920 33365130 -53312418 - AluSx SINE Alu -7 303 94 663 118 0 73 chr18 33365236 33365346 -53312202 - AluSx SINE Alu -211 102 1 868 165 0 0 chr18 33365628 33365761 -53311787 - AluJb SINE Alu -8 304 172 784 192 186 24 chr18 33367259 33367550 -53309998 + MER46C DNA MER2_type 1 338 0 1432 149 42 55 chr18 33367627 33367945 -53309603 + AluJb SINE Alu 1 314 0 2363 76 21 0 chr18 33368562 33368852 -53308696 + AluSg SINE Alu 1 296 -14 421 246 53 0 chr18 33368962 33369076 -53308472 + L1MC/D LINE L1 5626 5745 -2063 1435 178 60 11 chr18 33370476 33370757 -53306791 + AluJb SINE Alu 2 296 -16 1981 86 15 7 chr18 33371621 33371890 -53305658 + AluY SINE Alu 29 299 -12 510 303 125 25 chr18 33371953 33372346 -53305202 + L1MC/D LINE L1 5389 5820 -1988 339 189 47 34 chr18 33372773 33372921 -53304627 + (TATAA)n Simple_repeat Simple_repeat 3 152 0 280 248 40 30 chr18 33374210 33374311 -53303237 + MER103 DNA DNA 57 158 -8 52 0 0 0 chr18 33374611 33374663 -53302885 + AT_rich Low_complexity Low_complexity 1 52 0 200 268 36 0 chr18 33376450 33376506 -53301042 + L2 LINE L2 3244 3301 -12 1076 96 0 0 chr18 33376568 33376704 -53300844 + AluSg/x SINE Alu 151 286 -26 212 0 36 0 chr18 33377485 33377513 -53300035 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1280 175 5 5 chr18 33377534 33377740 -53299808 - AluJo SINE Alu -22 290 85 452 278 118 25 chr18 33378341 33378627 -53298921 + L1ME4a LINE L1 5641 5984 -137 2334 79 0 16 chr18 33378627 33378932 -53298616 + AluSg SINE Alu 1 300 -10 452 278 118 25 chr18 33378932 33379084 -53298464 + L1ME4a LINE L1 5984 6120 -1 23 0 0 0 chr18 33380020 33380043 -53297505 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr18 33380287 33380310 -53297238 + AT_rich Low_complexity Low_complexity 1 23 0 283 273 58 0 chr18 33380550 33380671 -53296877 - L1MC/D LINE L1 -1987 5821 5694 1246 148 136 23 chr18 33380804 33381061 -53296487 - L1PB4 LINE L1 -6 6150 5865 380 254 231 41 chr18 33381226 33381263 -53296285 + L1ME4a LINE L1 5675 5704 -417 2110 69 58 4 chr18 33381263 33381539 -53296009 - AluSc SINE Alu -18 291 1 380 254 231 41 chr18 33381539 33381796 -53295752 + L1ME4a LINE L1 5704 6025 -96 2394 93 0 3 chr18 33381828 33382138 -53295410 - AluY SINE Alu -2 309 1 48 53 0 0 chr18 33384127 33384203 -53293345 + AT_rich Low_complexity Low_complexity 1 76 0 243 0 0 0 chr18 33384232 33384259 -53293289 + (CCTG)n Simple_repeat Simple_repeat 3 29 0 251 254 8 68 chr18 33384592 33384710 -53292838 + L1PA2 LINE L1 5858 5968 -187 * 1216 206 68 10 chr18 33384632 33384992 -53292556 + L1MA4 LINE L1 5891 6287 -10 2314 95 0 3 chr18 33385029 33385333 -53292215 + AluY SINE Alu 1 303 -8 2120 113 0 3 chr18 33385780 33386087 -53291461 - AluSx SINE Alu 0 307 2 2137 105 0 7 chr18 33387094 33387400 -53290148 + AluSx SINE Alu 1 304 0 768 231 106 15 chr18 33387668 33387805 -53289743 + MER20 DNA MER1_type 2 164 -55 207 0 0 0 chr18 33387805 33387828 -53289720 + (CAAGA)n Simple_repeat Simple_repeat 5 27 0 768 231 106 15 chr18 33387828 33387889 -53289659 + MER20 DNA MER1_type 164 218 -1 241 238 0 0 chr18 33388460 33388502 -53289046 + AluJb SINE Alu 1 42 -260 2157 109 0 0 chr18 33388503 33388845 -53288703 + AluSx SINE Alu 1 342 0 1760 151 0 17 chr18 33388852 33389143 -53288405 + AluJb SINE Alu 26 311 -1 1048 130 6 47 chr18 33389779 33389910 -53287638 + AluJb SINE Alu 9 133 -179 2196 103 0 19 chr18 33389910 33390221 -53287327 + AluSx SINE Alu 1 305 -7 1048 130 6 47 chr18 33390221 33390258 -53287290 + AluJb SINE Alu 133 170 -142 466 261 114 25 chr18 33390272 33390552 -53286996 + L1MC4a LINE L1 5762 6066 -1742 2169 98 3 20 chr18 33390584 33390890 -53286658 + AluSx SINE Alu 1 301 -11 225 217 94 28 chr18 33391379 33391485 -53286063 + L1MC4a LINE L1 6074 6186 -1622 1950 136 7 10 chr18 33391563 33391872 -53285676 + AluJb SINE Alu 1 308 -4 1859 139 4 0 chr18 33391988 33392288 -53285260 + AluJb SINE Alu 1 301 0 402 119 0 45 chr18 33393046 33393113 -53284435 + FLAM SINE Alu 64 127 -16 1993 106 3 48 chr18 33393117 33393254 -53284294 + AluSx SINE Alu 1 143 -169 2390 89 0 3 chr18 33393254 33393557 -53283991 + AluSq SINE Alu 1 302 -11 1993 106 3 48 chr18 33393557 33393730 -53283818 + AluSx SINE Alu 143 297 -15 1765 130 91 11 chr18 33393731 33394016 -53283532 + AluSq SINE Alu 1 308 -5 1943 250 152 42 chr18 33394227 33395336 -53282212 + HAL1 LINE L1 636 1867 -640 723 231 61 52 chr18 33395355 33395584 -53281964 - MER106A DNA MER1_type -5 231 1 1376 132 167 8 chr18 33395714 33395971 -53281577 - AluJb SINE Alu -6 306 9 229 244 214 47 chr18 33395986 33396285 -53281263 + HAL1 LINE L1 2036 2384 -123 1621 174 7 52 chr18 33396364 33396527 -53281021 - AluJb SINE Alu -16 296 152 2070 96 46 0 chr18 33396527 33396809 -53280739 - AluSq SINE Alu -18 295 1 1621 174 7 52 chr18 33396809 33396955 -53280593 - AluJb SINE Alu -160 152 1 401 165 139 0 chr18 33397044 33397123 -53280425 + FLAM_C SINE Alu 16 105 -38 1837 149 0 4 chr18 33397129 33397404 -53280144 + AluSx SINE Alu 5 278 -34 373 18 18 18 chr18 33397406 33397461 -53280087 + (TAAAA)n Simple_repeat Simple_repeat 1 55 0 1437 180 46 36 chr18 33397469 33397589 -53279959 + AluJo SINE Alu 1 118 -194 279 0 0 0 chr18 33397589 33397620 -53279928 + (CA)n Simple_repeat Simple_repeat 2 32 0 1437 180 46 36 chr18 33397620 33397805 -53279743 + AluJo SINE Alu 118 309 -3 264 317 242 0 chr18 33397952 33398072 -53279476 + L2 LINE L2 3117 3265 -7 2258 109 0 3 chr18 33398151 33398462 -53279086 + AluSx SINE Alu 1 310 -2 203 233 50 0 chr18 33398464 33398524 -53279024 - MIR3 SINE MIR -48 160 98 1455 177 105 19 chr18 33398524 33398790 -53278758 + AluJo SINE Alu 1 289 -23 776 166 0 26 chr18 33398798 33398949 -53278599 + AluJb SINE Alu 165 311 -1 2346 94 0 0 chr18 33399375 33399672 -53277876 - AluSx SINE Alu -15 297 1 689 169 16 16 chr18 33399904 33400028 -53277520 + FLAM_C SINE Alu 1 124 -19 450 149 0 27 chr18 33400049 33400123 -53277425 + FLAM SINE Alu 53 124 -19 21 0 0 0 chr18 33400123 33400144 -53277404 + AT_rich Low_complexity Low_complexity 1 21 0 262 244 195 0 chr18 33400355 33400437 -53277111 - L2 LINE L2 -1 3312 3215 664 209 30 0 chr18 33401257 33401391 -53276157 + L1MC1 LINE L1 6196 6333 0 2056 123 14 3 chr18 33401400 33401693 -53275855 + AluSx SINE Alu 1 296 -16 2287 78 0 50 chr18 33401952 33402273 -53275275 + AluSx SINE Alu 1 305 -7 2501 66 0 0 chr18 33402273 33402573 -53274975 + AluY SINE Alu 1 301 -10 502 316 63 59 chr18 33402575 33402812 -53274736 + MIR SINE MIR 3 240 -22 2058 103 17 7 chr18 33403157 33403448 -53274100 + AluSx SINE Alu 1 294 -18 183 42 0 0 chr18 33403750 33403774 -53273774 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 2110 86 4 0 chr18 33403838 33404107 -53273441 + AluSq SINE Alu 1 270 -43 281 114 0 45 chr18 33404108 33404152 -53273396 + AluSp/q SINE Alu 232 270 -33 * 334 119 0 51 chr18 33404143 33404243 -53273305 + AluS SINE Alu 227 323 0 2167 92 14 0 chr18 33404315 33404629 -53272919 + AluSp SINE Alu 1 318 0 991 91 23 0 chr18 33404686 33404818 -53272730 + AluSp/q SINE Alu 166 300 -13 832 150 50 120 chr18 33404885 33404990 -53272558 + AluJo SINE Alu 12 98 -214 2289 94 0 10 chr18 33404990 33405289 -53272259 - AluSg SINE Alu -13 297 2 832 150 50 120 chr18 33405289 33405383 -53272165 + AluJo SINE Alu 98 197 -115 1571 177 19 41 chr18 33405430 33405747 -53271801 + AluJo SINE Alu 1 310 -2 2200 117 3 3 chr18 33405873 33406180 -53271368 + AluSx SINE Alu 1 307 -5 2400 80 3 6 chr18 33406183 33406495 -53271053 + AluY SINE Alu 1 311 0 1249 205 9 0 chr18 33406501 33406730 -53270818 + AluJb SINE Alu 1 231 -81 48 53 0 0 chr18 33408529 33408605 -53268943 + AT_rich Low_complexity Low_complexity 1 76 0 243 0 0 0 chr18 33408634 33408661 -53268887 + (CCTG)n Simple_repeat Simple_repeat 3 29 0 1138 206 68 10 chr18 33409034 33409394 -53268154 + L1MA4 LINE L1 5891 6287 -10 2382 92 0 0 chr18 33409431 33409735 -53267813 + AluY SINE Alu 1 304 -7 405 338 121 52 chr18 33409735 33410197 -53267351 + L1M2 LINE L1 15 508 -6341 2375 60 7 3 chr18 33410553 33410853 -53266695 + AluY SINE Alu 1 301 -10 2464 73 3 3 chr18 33410863 33411165 -53266383 + AluSp SINE Alu 1 302 -11 10798 206 41 20 chr18 33411459 33413313 -53264235 + L1PA16 LINE L1 1736 3548 -2618 288 0 0 0 chr18 33413313 33413345 -53264203 + (TA)n Simple_repeat Simple_repeat 2 33 0 10798 206 41 20 chr18 33413345 33415830 -53261718 + L1PA16 LINE L1 3548 6141 -25 2275 117 0 0 chr18 33415837 33416137 -53261411 - AluSg SINE Alu -10 300 1 339 115 19 0 chr18 33416166 33416218 -53261330 + Alu SINE Alu 2 54 -246 531 258 0 0 chr18 33416319 33416439 -53261109 - AluSp SINE Alu -180 133 14 189 0 0 0 chr18 33416488 33416509 -53261039 + (A)n Simple_repeat Simple_repeat 1 21 0 2022 107 0 0 chr18 33416844 33417106 -53260442 + AluSg SINE Alu 2 263 -47 3537 105 0 80 chr18 33417271 33417506 -53260042 + L1PA10 LINE L1 3771 4023 -2123 2391 80 3 3 chr18 33417506 33417807 -53259741 + AluSq SINE Alu 1 301 -12 3537 105 0 80 chr18 33417807 33418218 -53259330 + L1PA10 LINE L1 4023 4365 -1781 1147 78 0 28 chr18 33418214 33418393 -53259155 + L1PA10 LINE L1 5311 5484 -647 * 1456 118 5 0 chr18 33418394 33418589 -53258959 + AluSp SINE Alu 1 196 -117 3348 76 19 9 chr18 33418600 33419061 -53258487 + L1PA10 LINE L1 5687 6152 -16 23 0 0 0 chr18 33419062 33419085 -53258463 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr18 33420623 33420653 -53256895 + AT_rich Low_complexity Low_complexity 1 30 0 190 204 102 20 chr18 33421981 33422030 -53255518 - MIR3 SINE MIR -1 207 155 24 91 0 0 chr18 33422216 33422282 -53255266 + AT_rich Low_complexity Low_complexity 1 66 0 314 284 156 39 chr18 33422485 33422885 -53254663 - L1MC4a LINE L1 -1917 5891 5418 1523 183 35 7 chr18 33422885 33423175 -53254373 + AluJo SINE Alu 10 307 -5 314 284 156 39 chr18 33423175 33423281 -53254267 - L1MC4a LINE L1 -2390 5418 5326 309 135 0 0 chr18 33423514 33423566 -53253982 + (TG)n Simple_repeat Simple_repeat 2 53 0 23 0 0 0 chr18 33423976 33423999 -53253549 + AT_rich Low_complexity Low_complexity 1 23 0 296 248 80 44 chr18 33426076 33426189 -53251359 - L2 LINE L2 -1 3271 3155 25 65 0 0 chr18 33426477 33426523 -53251025 + AT_rich Low_complexity Low_complexity 1 46 0 336 312 155 67 chr18 33426581 33426758 -53250790 - L2 LINE L2 -812 2502 2342 2184 110 7 10 chr18 33426758 33427059 -53250489 - AluSx SINE Alu -12 300 1 336 312 155 67 chr18 33427059 33427256 -53250292 - L2 LINE L2 -972 2342 2095 29 60 0 0 chr18 33427715 33427765 -53249783 + AT_rich Low_complexity Low_complexity 1 50 0 1118 203 82 23 chr18 33428134 33428440 -53249108 + MER2 DNA MER2_type 22 345 0 487 243 71 29 chr18 33429402 33429542 -53248006 + MIR SINE MIR 116 261 -1 251 328 25 49 chr18 33429633 33429755 -53247793 + L2 LINE L2 2642 2760 -554 1896 143 11 3 chr18 33429800 33430087 -53247461 + AluSg SINE Alu 1 289 -21 2075 130 13 0 chr18 33430091 33430392 -53247156 + AluSx SINE Alu 1 305 -7 1868 138 0 51 chr18 33432167 33432479 -53245069 + AluSx SINE Alu 1 296 -16 2380 50 13 3 chr18 33432903 33433201 -53244347 + AluY SINE Alu 1 301 -10 243 88 0 0 chr18 33433244 33433278 -53244270 + (TG)n Simple_repeat Simple_repeat 2 35 0 832 146 8 0 chr18 33433878 33434008 -53243540 + FLAM_C SINE Alu 1 131 -2 1863 156 7 7 chr18 33434094 33434396 -53243152 + AluJb SINE Alu 7 308 -4 1391 118 5 0 chr18 33434414 33434600 -53242948 + AluSp SINE Alu 13 199 -114 183 288 27 68 chr18 33434726 33434799 -53242749 + L2 LINE L2 3201 3270 -43 2166 128 0 0 chr18 33434882 33435179 -53242369 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr18 33435663 33435687 -53241861 + AT_rich Low_complexity Low_complexity 1 24 0 936 158 22 65 chr18 33436240 33436424 -53241124 + AluSx SINE Alu 60 235 -77 343 284 169 14 chr18 33436887 33437035 -53240513 - MIR SINE MIR -4 258 88 23 33 0 0 chr18 33437128 33437158 -53240390 + AT_rich Low_complexity Low_complexity 1 30 0 768 194 0 22 chr18 33437281 33437415 -53240133 - FLAM_A SINE Alu -2 131 1 21 0 0 0 chr18 33437759 33437780 -53239768 + AT_rich Low_complexity Low_complexity 1 21 0 274 321 94 0 chr18 33438133 33438239 -53239309 - MIR3 SINE MIR 0 208 93 23 68 0 0 chr18 33438819 33438863 -53238685 + AT_rich Low_complexity Low_complexity 1 44 0 21 36 0 0 chr18 33439387 33439415 -53238133 + AT_rich Low_complexity Low_complexity 1 28 0 493 310 170 21 chr18 33440476 33440905 -53236643 + L3 LINE CR1 1083 1575 -2 891 95 0 3 chr18 33441368 33441599 -53235949 + AluSx SINE Alu 1 294 -15 2052 89 45 58 chr18 33441604 33441917 -53235631 + AluSx SINE Alu 1 309 -3 341 115 19 0 chr18 33441926 33441978 -53235570 + Alu SINE Alu 1 53 -255 * 363 20 0 0 chr18 33441976 33442025 -53235523 + AluY SINE Alu 254 302 0 1220 120 0 55 chr18 33442325 33442342 -53235206 + AluSg/x SINE Alu 118 134 -176 2085 128 0 10 chr18 33442342 33442638 -53234910 + AluSx SINE Alu 1 293 -19 1220 120 0 55 chr18 33442638 33442820 -53234728 + AluSg/x SINE Alu 134 306 -4 2238 128 0 0 chr18 33442981 33443278 -53234270 + AluSx SINE Alu 3 299 -13 1101 190 156 15 chr18 33444030 33444293 -53233255 + AluSc SINE Alu 7 306 -3 1906 120 35 7 chr18 33445320 33445603 -53231945 + AluSx SINE Alu 1 291 -21 2274 95 3 13 chr18 33445616 33445748 -53231800 + AluSx SINE Alu 4 136 -176 2336 55 41 10 chr18 33445748 33446041 -53231507 + AluY SINE Alu 1 302 -9 2274 95 3 13 chr18 33446041 33446212 -53231336 + AluSx SINE Alu 136 304 -8 2119 113 0 3 chr18 33446659 33446966 -53230582 - AluSx SINE Alu 0 307 2 2142 105 0 7 chr18 33447975 33448281 -53229267 + AluSx SINE Alu 1 304 0 3913 146 7 80 chr18 33448781 33448878 -53228670 + MER4E LTR ERV1 1 103 -676 2312 75 7 10 chr18 33448878 33449172 -53228376 + AluSg SINE Alu 1 293 -17 3913 146 7 80 chr18 33449172 33449367 -53228181 + MER4E LTR ERV1 103 311 -468 2003 102 72 7 chr18 33449367 33449660 -53227888 + AluSq SINE Alu 1 312 -1 3913 146 7 80 chr18 33449660 33450159 -53227389 + MER4E LTR ERV1 311 731 -48 2185 110 7 7 chr18 33450159 33450458 -53227090 + AluSg SINE Alu 1 299 -11 3913 146 7 80 chr18 33450458 33450504 -53227044 + MER4E LTR ERV1 731 779 0 1862 119 65 7 chr18 33450573 33450851 -53226697 + AluSx SINE Alu 1 294 -18 1162 68 124 0 chr18 33451111 33451288 -53226260 - MER4E LTR ERV1 0 766 568 1562 193 17 24 chr18 33451288 33451738 -53225810 + LTR2B LTR ERV1 1 490 0 374 141 131 40 chr18 33451738 33451837 -53225711 - MER4E LTR ERV1 -193 586 479 423 137 0 0 chr18 33451843 33451916 -53225632 + AluS SINE Alu 228 300 -11 2315 153 69 27 chr18 33451916 33451945 -53225603 - MER4E LTR ERV1 -310 469 443 2315 99 0 13 chr18 33451945 33452259 -53225289 + AluSg SINE Alu 1 310 0 2315 153 69 27 chr18 33452259 33452405 -53225143 - MER4E LTR ERV1 -336 443 305 2130 104 3 13 chr18 33452405 33452569 -53224979 - AluSc SINE Alu -14 295 134 2237 115 0 6 chr18 33452569 33452881 -53224667 - AluSx SINE Alu -2 310 1 2130 104 3 13 chr18 33452881 33453014 -53224534 - AluSc SINE Alu -175 134 1 2315 153 69 27 chr18 33453014 33453287 -53224261 - MER4E LTR ERV1 -474 305 1 * 2583 139 77 68 chr18 33453287 33453708 -53223840 + LTR29 LTR ERV1 13 429 -213 818 209 0 19 chr18 33453708 33453866 -53223682 + FRAM SINE Alu 5 159 -7 2583 139 77 68 chr18 33453866 33453953 -53223595 + LTR29 LTR ERV1 429 514 -128 1680 186 7 0 chr18 33453953 33454233 -53223315 + AluJb SINE Alu 1 282 -30 835 156 0 0 chr18 33454105 33454233 -53223315 + AluJb SINE Alu 155 308 0 181 77 0 0 chr18 33454233 33454259 -53223289 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2583 139 77 68 chr18 33454259 33454342 -53223206 + LTR29 LTR ERV1 513 623 -19 325 274 52 44 chr18 33454352 33454404 -53223144 - MLT1K LTR MaLR -327 261 211 4512 122 46 42 chr18 33454404 33454680 -53222868 + MER4E LTR ERV1 1 274 -505 1576 83 0 0 chr18 33454680 33454873 -53222675 + AluSc SINE Alu 86 278 -31 4512 122 46 42 chr18 33454873 33455372 -53222176 + MER4E LTR ERV1 274 779 0 325 274 52 44 chr18 33455372 33455454 -53222094 - MLT1K LTR MaLR -377 211 126 1050 122 0 113 chr18 33455677 33455890 -53221658 + AluSg SINE Alu 1 189 -121 425 110 68 0 chr18 33455890 33455963 -53221585 + AluSg SINE Alu 57 134 -176 2279 84 7 0 chr18 33455963 33456261 -53221287 + AluSg SINE Alu 1 300 -10 22 0 0 0 chr18 33456391 33456413 -53221135 + AT_rich Low_complexity Low_complexity 1 22 0 2162 106 0 10 chr18 33456904 33457215 -53220333 + AluSx SINE Alu 1 308 -4 232 254 16 0 chr18 33457266 33457329 -53220219 - MLT1J LTR MaLR -343 168 105 1341 172 76 102 chr18 33457695 33458155 -53219393 + LTR7 LTR ERV1 1 448 -2 2026 107 3 17 chr18 33458231 33458531 -53219017 - AluSq SINE Alu -17 296 1 2302 98 3 0 chr18 33458683 33458989 -53218559 - AluSp SINE Alu -6 307 1 928 83 8 0 chr18 33458993 33459125 -53218423 - AluSp SINE Alu -180 133 1 922 103 127 6 chr18 33459127 33459158 -53218390 + L1MA1 LINE L1 6118 6144 -158 1961 127 0 7 chr18 33459158 33459457 -53218091 + AluSx SINE Alu 3 299 -13 922 103 127 6 chr18 33459457 33459590 -53217958 + L1MA1 LINE L1 6144 6302 0 833 120 81 154 chr18 33459605 33459728 -53217820 - LTR26E LTR ERV1 -206 416 286 1827 128 0 10 chr18 33459728 33460017 -53217531 - AluSx SINE Alu -18 294 9 833 120 81 154 chr18 33460017 33460033 -53217515 - LTR26E LTR ERV1 -336 286 270 1454 112 127 19 chr18 33460033 33460293 -53217255 - AluSg SINE Alu -21 289 2 1820 142 14 10 chr18 33460300 33460596 -53216952 - AluSq SINE Alu -16 297 1 833 120 81 154 chr18 33460596 33460681 -53216867 - LTR26E LTR ERV1 -358 264 200 1355 152 9 0 chr18 33460725 33460936 -53216612 - LTR26E LTR ERV1 -409 213 1 309 196 0 0 chr18 33460936 33460987 -53216561 + L1MC4 LINE L1 6653 6703 -1339 * 544 218 69 167 chr18 33460985 33461166 -53216382 - L1 LINE L1 -2361 3785 3588 1527 160 3 55 chr18 33461166 33461478 -53216070 + AluJo SINE Alu 1 296 -16 2203 101 0 9 chr18 33461479 33461795 -53215753 + AluSq SINE Alu 1 313 0 544 218 69 167 chr18 33461795 33461810 -53215738 - L1 LINE L1 -2558 3588 3573 812 164 0 0 chr18 33461810 33461932 -53215616 + FLAM_C SINE Alu 1 122 -11 544 218 69 167 chr18 33461932 33462049 -53215499 - L1 LINE L1 -2573 3573 3503 1612 157 0 54 chr18 33462049 33462386 -53215162 - AluJb SINE Alu 0 312 1 544 218 69 167 chr18 33462386 33462416 -53215132 - L1 LINE L1 -2643 3503 3472 6904 23 0 359 chr18 33462442 33464605 -53212943 + SVA Other Other 1 1386 0 1340 165 9 142 chr18 33464669 33465015 -53212533 - AluJo SINE Alu -2 300 1 2348 52 10 0 chr18 33466655 33466944 -53210604 - AluY SINE Alu -19 292 1 1851 98 7 47 chr18 33467392 33467531 -53210017 + AluSx SINE Alu 1 144 -171 1986 109 3 3 chr18 33467531 33467816 -53209732 + AluSg SINE Alu 3 287 -23 2191 97 10 0 chr18 33467819 33468118 -53209430 + AluSp SINE Alu 1 302 -11 1851 98 7 47 chr18 33468118 33468301 -53209247 + AluSx SINE Alu 146 315 0 2261 125 39 0 chr18 33468502 33468863 -53208685 - THE1C LTR MaLR 0 375 1 1314 158 87 9 chr18 33469263 33469616 -53207932 - MER21B LTR ERV1 -390 473 57 199 240 20 0 chr18 33469626 33469676 -53207872 - L2 LINE L2 -38 3234 3184 1990 138 0 0 chr18 33470895 33471192 -53206356 - AluSg SINE Alu -13 297 1 25 0 0 0 chr18 33471247 33471272 -53206276 + AT_rich Low_complexity Low_complexity 1 25 0 1993 118 17 0 chr18 33471369 33471657 -53205891 + AluSq SINE Alu 6 298 -15 536 258 94 6 chr18 33471701 33471860 -53205688 - MIR SINE MIR 0 262 90 1642 179 14 3 chr18 33471953 33472244 -53205304 - AluJo SINE Alu -18 294 1 2046 96 7 0 chr18 33472643 33472923 -53204625 + AluSq SINE Alu 1 282 -31 391 114 126 20 chr18 33472923 33473013 -53204535 - AluS SINE Alu -19 281 233 2060 108 7 0 chr18 33474393 33474679 -53202869 + AluSx SINE Alu 2 289 -23 1058 118 0 0 chr18 33474963 33475115 -53202433 - AluSg/x SINE Alu -32 277 126 275 212 30 15 chr18 33475215 33475281 -53202267 + L2 LINE L2 3175 3241 -31 2266 103 0 0 chr18 33475318 33475618 -53201930 + AluSx SINE Alu 1 300 -12 1263 95 6 0 chr18 33476188 33476357 -53201191 + AluSp SINE Alu 1 170 -143 5356 116 4 9 chr18 33476457 33477245 -53200303 + HERVH LTR ERV1 2047 2830 -4883 4300 199 9 19 chr18 33477245 33478514 -53199034 + HERVH LTR ERV1 3357 4552 -2735 1624 142 0 0 chr18 33478504 33478765 -53198783 + HERVH LTR ERV1 5756 6016 -1697 * 3551 119 5 31 chr18 33478758 33479330 -53198218 + HERVH LTR ERV1 7157 7713 0 773 138 126 23 chr18 33479330 33479488 -53198060 + LTR7 LTR ERV1 1 218 -232 356 135 0 0 chr18 33479617 33479669 -53197879 + LTR7 LTR ERV1 391 442 -8 244 283 43 33 chr18 33479723 33479815 -53197733 - MLT1K LTR MaLR -494 94 2 240 376 0 0 chr18 33479823 33479908 -53197640 + L2 LINE L2 3187 3271 -1 382 229 159 13 chr18 33479923 33480080 -53197468 - MIR SINE MIR -6 256 77 2058 119 3 0 chr18 33480164 33480466 -53197082 + AluSq SINE Alu 1 303 -10 280 235 133 10 chr18 33480469 33480567 -53196981 + L1M4 LINE L1 4478 4587 -1559 283 122 20 0 chr18 33480654 33480703 -53196845 + Alu SINE Alu 3 52 -251 2341 51 3 3 chr18 33480912 33481207 -53196341 - AluY SINE Alu -16 295 1 231 279 0 59 chr18 33482152 33482252 -53195296 + MIR SINE MIR 44 135 -107 1600 165 171 65 chr18 33482258 33482754 -53194794 - LTR49 LTR ERV1 -46 549 1 903 190 6 0 chr18 33482801 33482975 -53194573 - AluJb SINE Alu -3 309 135 1904 154 0 0 chr18 33482975 33483280 -53194268 - AluSx SINE Alu -7 305 1 1235 156 76 13 chr18 33483281 33483519 -53194029 - LTR49-int LTR ERV1 -1090 5241 4989 1996 114 0 0 chr18 33483620 33483929 -53193619 - AluSx SINE Alu 0 309 1 728 242 31 35 chr18 33483996 33484256 -53193292 + MIR SINE MIR 2 260 -2 1634 156 18 0 chr18 33484256 33484531 -53193017 + AluJo SINE Alu 1 280 -32 281 257 72 86 chr18 33484544 33484687 -53192861 - L1ME LINE L1 -291 5830 5690 2051 109 0 16 chr18 33484687 33484991 -53192557 + AluSx SINE Alu 1 299 -13 281 257 72 86 chr18 33484991 33485069 -53192479 - L1ME LINE L1 -431 5690 5612 2194 96 0 0 chr18 33485093 33485384 -53192164 + AluSc SINE Alu 1 291 -18 788 98 0 148 chr18 33485384 33485396 -53192152 - L1PA7 LINE L1 -17 6137 6125 195 42 0 0 chr18 33485396 33485420 -53192128 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 788 98 0 148 chr18 33485420 33485580 -53191968 - L1PA7 LINE L1 -29 6125 5991 470 163 0 0 chr18 33485582 33485668 -53191880 - FLAM_C SINE Alu -3 140 55 899 209 19 44 chr18 33485759 33485965 -53191583 + LTR31 LTR ERV1 127 327 -292 706 167 0 38 chr18 33485976 33486162 -53191386 + CT-rich Low_complexity Low_complexity 2 180 0 867 186 60 0 chr18 33486170 33486353 -53191195 - AluJo SINE Alu 0 312 119 1306 239 10 10 chr18 33486355 33486632 -53190916 + LTR31 LTR ERV1 331 610 -9 5171 77 27 4 chr18 33486632 33487308 -53190240 - LTR8 LTR ERV1 0 691 1 354 244 23 23 chr18 33487308 33487394 -53190154 - AluSg/x SINE Alu -97 203 118 247 222 22 56 chr18 33487560 33487650 -53189898 + (CATATA)n Simple_repeat Simple_repeat 2 88 0 419 241 46 21 chr18 33487662 33487804 -53189744 - L1MC4a LINE L1 -250 5924 5778 542 75 0 0 chr18 33487804 33487902 -53189646 - AluSc SINE Alu 0 312 215 347 166 72 196 chr18 33487902 33487959 -53189589 - L1MC4a LINE L1 -333 5788 5726 1386 187 14 24 chr18 33487959 33488281 -53189267 + AluJo SINE Alu 1 319 0 347 166 72 196 chr18 33488281 33488427 -53189121 - L1MC4a LINE L1 -395 5726 5599 1424 152 0 4 chr18 33488864 33489140 -53188408 + AluJb SINE Alu 83 357 0 629 168 23 76 chr18 33489162 33489270 -53188278 + AluJo/FLAM SINE Alu 2 103 -209 1483 132 171 12 chr18 33489270 33489527 -53188021 - AluSc SINE Alu 0 299 2 629 168 23 76 chr18 33489527 33489549 -53187999 + AluJo/FLAM SINE Alu 103 125 -187 200 327 130 31 chr18 33489655 33489817 -53187731 + MIR SINE MIR 1 178 -84 1609 181 36 10 chr18 33489968 33490272 -53187276 + AluJo SINE Alu 1 312 0 1877 150 0 3 chr18 33490302 33490608 -53186940 + AluSc SINE Alu 1 305 -4 781 246 207 62 chr18 33490822 33491266 -53186282 + MLT1L LTR MaLR 11 542 -73 2019 111 0 7 chr18 33491266 33491554 -53185994 - AluSg SINE Alu -18 292 7 781 246 207 62 chr18 33491554 33491625 -53185923 + MLT1L LTR MaLR 542 601 -14 1416 315 113 41 chr18 33491627 33491883 -53185665 - L2 LINE L2 -502 2812 2576 2116 95 0 17 chr18 33491883 33492177 -53185371 + AluSg SINE Alu 5 293 -17 1416 315 113 41 chr18 33492177 33492977 -53184571 - L2 LINE L2 -738 2576 1680 262 286 68 30 chr18 33493044 33493177 -53184371 + L2 LINE L2 2916 3053 -219 1416 143 27 104 chr18 33493283 33493618 -53183930 - AluYb8 SINE Alu -9 309 1 1785 100 85 0 chr18 33493620 33493891 -53183657 - AluSx SINE Alu -18 294 1 672 201 122 0 chr18 33493894 33494033 -53183515 - AluJb SINE Alu -20 292 137 305 102 20 0 chr18 33494158 33494207 -53183341 + L1MD1 LINE L1 6174 6223 -19 325 351 18 0 chr18 33494226 33494340 -53183208 + L2 LINE L2 3157 3272 0 990 73 0 40 chr18 33494342 33494493 -53183055 - AluSq/x SINE Alu -167 145 1 279 0 0 0 chr18 33496359 33496390 -53181158 + (TG)n Simple_repeat Simple_repeat 2 32 0 1755 84 0 59 chr18 33496406 33496679 -53180869 - AluSx SINE Alu -30 282 26 1945 122 0 21 chr18 33496826 33497143 -53180405 - AluSx SINE Alu 0 312 2 279 297 0 0 chr18 33497297 33497361 -53180187 + L2 LINE L2 3230 3293 -20 180 0 0 0 chr18 33497361 33497381 -53180167 + (A)n Simple_repeat Simple_repeat 1 20 0 278 277 64 21 chr18 33497480 33497574 -53179974 - MIR3 SINE MIR -26 182 85 814 130 7 22 chr18 33497694 33497832 -53179716 - AluJb SINE Alu -176 136 1 383 268 27 0 chr18 33498343 33498455 -53179093 + MER103 DNA DNA 44 158 -8 1191 104 0 0 chr18 33498620 33498784 -53178764 - AluSg/x SINE Alu -16 296 133 2243 81 0 19 chr18 33498785 33499092 -53178456 - AluSp SINE Alu -12 301 1 399 204 51 10 chr18 33499114 33499212 -53178336 + L2 LINE L2 3208 3309 -4 1825 120 3 31 chr18 33499296 33499639 -53177909 - AluSx SINE Alu 0 335 1 295 276 51 20 chr18 33500313 33500411 -53177137 - MER94 DNA DNA -24 110 10 2067 117 3 0 chr18 33501029 33501320 -53176228 - AluSx SINE Alu -20 292 1 689 265 104 9 chr18 33501346 33501557 -53175991 - MIR SINE MIR -12 250 20 339 294 191 0 chr18 33501989 33502115 -53175433 + MIR SINE MIR 19 168 -94 350 222 0 0 chr18 33502157 33502220 -53175328 + MLT1L LTR MaLR 141 203 -412 1559 174 31 46 chr18 33502245 33502572 -53174976 + MLT1A2 LTR MaLR 5 404 -53 1957 111 10 0 chr18 33502621 33502909 -53174639 + AluSp SINE Alu 15 305 -8 1230 112 6 6 chr18 33503149 33503367 -53174181 + AluSp SINE Alu 107 324 0 23 33 0 0 chr18 33504175 33504205 -53173343 + AT_rich Low_complexity Low_complexity 1 30 0 1937 101 51 0 chr18 33504205 33504481 -53173067 - AluSg SINE Alu -20 290 1 1937 147 7 0 chr18 33504481 33504781 -53172767 - AluSx SINE Alu -10 302 1 2309 65 0 49 chr18 33505007 33505332 -53172216 - AluY SINE Alu -2 309 1 2083 144 0 6 chr18 33505536 33505848 -53171700 - AluSx SINE Alu -2 310 1 2455 73 7 0 chr18 33506574 33506874 -53170674 + AluSp SINE Alu 1 302 -11 1998 141 3 3 chr18 33507239 33507530 -53170018 - AluSx SINE Alu -21 291 1 701 239 88 41 chr18 33507738 33508091 -53169457 + LTR16A LTR ERVL 51 431 -26 860 131 7 29 chr18 33508098 33508235 -53169313 + FRAM SINE Alu 23 156 -20 2233 110 0 3 chr18 33508259 33508551 -53168997 + AluSc SINE Alu 1 291 -18 2412 86 3 0 chr18 33508609 33508931 -53168617 + AluSp SINE Alu 1 323 0 823 271 18 9 chr18 33508942 33509167 -53168381 - MIR SINE MIR -16 246 20 2211 138 0 0 chr18 33509834 33510146 -53167402 + AluSx SINE Alu 1 312 0 2142 105 0 69 chr18 33511157 33511302 -53166246 + AluSx SINE Alu 1 154 -158 2326 75 3 0 chr18 33511302 33511584 -53165964 + AluSp SINE Alu 11 293 -20 2142 105 0 69 chr18 33511584 33511771 -53165777 + AluSx SINE Alu 154 310 -2 218 290 169 0 chr18 33511854 33511978 -53165570 + MIR SINE MIR 96 240 -22 1146 136 0 6 chr18 33512665 33512841 -53164707 + AluSg/x SINE Alu 135 309 -3 2355 102 0 0 chr18 33512981 33513274 -53164274 + AluSc SINE Alu 1 293 -16 1058 162 233 24 chr18 33513341 33513594 -53163954 - AluJo SINE Alu -4 308 3 264 330 10 10 chr18 33513795 33513895 -53163653 + MIR3 SINE MIR 105 204 -4 2120 98 4 4 chr18 33513970 33514246 -53163302 - AluSp SINE Alu -36 277 2 478 248 124 6 chr18 33514953 33515114 -53162434 + MER5A DNA MER1_type 10 189 0 195 42 0 0 chr18 33515398 33515422 -53162126 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 495 115 0 0 chr18 33515422 33515500 -53162048 - AluS SINE Alu -2 307 230 2063 112 0 0 chr18 33515502 33515771 -53161777 - AluSx SINE Alu -43 269 1 2336 97 3 0 chr18 33515929 33516229 -53161319 - AluSp SINE Alu -12 301 1 1394 144 82 112 chr18 33516586 33517050 -53160498 + LTR7 LTR ERV1 1 450 0 4079 195 58 78 chr18 33517050 33519155 -53158393 + HERVH LTR ERV1 1 2032 -5681 377 151 0 14 chr18 33519261 33519334 -53158214 + GA-rich Low_complexity Low_complexity 2 73 0 1969 119 0 4 chr18 33520021 33520298 -53157250 - AluY SINE Alu -5 306 31 1119 121 77 148 chr18 33520298 33520596 -53156952 + LTR12 LTR ERV1 1 277 -437 297 267 0 0 chr18 33520596 33520671 -53156877 + LTR30 LTR ERV1 544 618 -104 2123 128 3 3 chr18 33520701 33521006 -53156542 - AluSx SINE Alu -7 305 1 271 336 9 9 chr18 33521308 33521421 -53156127 - L2 LINE L2 -497 2817 2705 2149 130 0 0 chr18 33521422 33521723 -53155825 - AluSx SINE Alu -11 301 1 741 133 0 0 chr18 33521906 33522019 -53155529 - AluSg/x SINE Alu -2 310 198 989 175 29 0 chr18 33522182 33522353 -53155195 - LTR49-int LTR ERV1 -4364 1967 1792 359 164 154 89 chr18 33522351 33522493 -53155055 - LTR49-int LTR ERV1 -4554 1728 299 * 936 92 0 0 chr18 33522496 33522616 -53154932 - AluSg/x SINE Alu -14 296 177 2111 118 30 0 chr18 33522672 33522969 -53154579 - AluSx SINE Alu -6 306 1 396 209 0 0 chr18 33523579 33523646 -53153902 - tRNA-Glu-GAG tRNA tRNA -2 73 7 23 0 0 0 chr18 33523657 33523680 -53153868 + AT_rich Low_complexity Low_complexity 1 23 0 475 179 21 32 chr18 33523691 33523786 -53153762 - LTR49-int LTR ERV1 -5149 1182 1089 909 183 150 110 chr18 33524183 33524446 -53153102 - LTR49 LTR ERV1 -55 540 254 2705 52 0 0 chr18 33524446 33524755 -53152793 + AluY SINE Alu 1 309 -2 909 183 150 110 chr18 33524755 33524890 -53152658 - LTR49 LTR ERV1 -341 254 126 1635 143 124 4 chr18 33524994 33525260 -53152288 - AluSx SINE Alu -14 298 1 264 184 0 0 chr18 33525276 33525325 -53152223 + MIR SINE MIR 97 145 -117 1729 164 31 7 chr18 33525752 33526039 -53151509 + AluJb SINE Alu 1 294 -18 2214 87 13 13 chr18 33526440 33526749 -53150799 - AluSx SINE Alu -2 310 2 811 104 0 0 chr18 33526977 33527092 -53150456 + MER4B LTR ERV1 1 115 -495 563 161 99 87 chr18 33527101 33527262 -53150286 - MSTD LTR MaLR -31 365 203 586 121 0 11 chr18 33527272 33527363 -53150185 - FLAM_A SINE Alu -7 135 46 758 249 12 6 chr18 33527371 33527544 -53150004 - MSTD LTR MaLR -212 184 11 237 273 30 0 chr18 33527695 33527761 -53149787 + MIR SINE MIR 81 148 -60 234 0 0 0 chr18 33527894 33527920 -53149628 + (A)n Simple_repeat Simple_repeat 1 26 0 1942 97 37 47 chr18 33528305 33528474 -53149074 - AluSx SINE Alu -16 296 130 2043 113 0 20 chr18 33528474 33528786 -53148762 - AluSx SINE Alu 0 312 1 1942 97 37 47 chr18 33528786 33528915 -53148633 - AluSx SINE Alu -182 130 1 996 84 45 62 chr18 33529119 33529298 -53148250 + AluSg/x SINE Alu 135 310 0 1440 132 14 14 chr18 33529734 33529947 -53147601 + AluSg/x SINE Alu 84 296 -16 2142 104 7 0 chr18 33529949 33530251 -53147297 + AluSp SINE Alu 3 306 0 324 246 71 24 chr18 33530860 33530986 -53146562 + MIR SINE MIR 85 216 -46 2051 104 49 7 chr18 33531039 33531327 -53146221 + AluSx SINE Alu 1 300 -12 300 189 0 0 chr18 33531598 33531651 -53145897 - MLT1K LTR MaLR -525 63 11 936 206 62 5 chr18 33531886 33532131 -53145417 + L1ME3A LINE L1 5713 5970 -200 428 222 157 32 chr18 33532236 33532279 -53145269 + L1ME3A LINE L1 5963 5999 -171 2387 103 0 3 chr18 33532279 33532589 -53144959 + AluSq SINE Alu 1 309 -4 428 222 157 32 chr18 33532589 33532730 -53144818 + L1ME3A LINE L1 5999 6170 0 820 193 9 75 chr18 33532977 33533190 -53144358 + AluJo SINE Alu 91 289 -23 1216 153 0 0 chr18 33533192 33533369 -53144179 + AluSx SINE Alu 1 177 -135 1708 187 147 23 chr18 33533369 33533851 -53143697 - LTR10B LTR ERV1 0 547 6 1298 182 24 7 chr18 33533856 33534142 -53143406 - LTR10B-int LTR ERV1 0 6649 6254 1613 185 0 7 chr18 33534149 33534430 -53143118 - HERVI LTR ERV1 -895 6890 6612 8851 190 18 21 chr18 33534468 33536560 -53140988 - HERVI LTR ERV1 -1950 5835 2720 867 219 6 17 chr18 33536551 33536729 -53140819 - HERVI LTR ERV1 -4182 3603 3428 * 267 214 0 0 chr18 33536766 33536822 -53140726 - HERVI LTR ERV1 -5682 2103 2048 * 277 298 0 0 chr18 33536807 33536891 -53140657 - HERVI LTR ERV1 -4935 1714 1631 3067 228 60 23 chr18 33536917 33537792 -53139756 - HERVI LTR ERV1 -5252 1729 510 1282 178 101 8 chr18 33537795 33538053 -53139495 - HERVI LTR ERV1 -6357 292 11 1704 194 100 35 chr18 33538054 33538564 -53138984 - LTR10B LTR ERV1 -4 543 1 1103 75 0 0 chr18 33538564 33538698 -53138850 + AluSx SINE Alu 172 305 -5 1533 145 0 0 chr18 33538842 33539084 -53138464 - L1PA15 LINE L1 0 6165 5924 2068 122 0 21 chr18 33539335 33539652 -53137896 - AluSx SINE Alu 0 312 2 256 297 0 0 chr18 33539806 33539870 -53137678 + L2 LINE L2 3230 3293 -20 1371 148 43 9 chr18 33540193 33540423 -53137125 + AluJo SINE Alu 54 291 -21 182 206 0 0 chr18 33540525 33540559 -53136989 + MIR SINE MIR 211 244 -18 2192 113 3 28 chr18 33540780 33541099 -53136449 - AluSx SINE Alu -1 311 1 2332 114 7 0 chr18 33541282 33541590 -53135958 - AluSx SINE Alu -2 310 1 237 270 9 36 chr18 33542450 33542561 -53134987 + CT-rich Low_complexity Low_complexity 4 111 0 2843 10 0 0 chr18 33542641 33542947 -53134601 - AluYa5 SINE Alu -5 306 1 2339 96 0 0 chr18 33543888 33544180 -53133368 + AluSx SINE Alu 5 296 -16 2224 96 0 0 chr18 33545012 33545322 -53132226 - AluSg SINE Alu 0 310 1 1017 176 29 17 chr18 33545322 33545560 -53131988 - MER33 DNA MER1_type -13 311 71 512 152 0 0 chr18 33545560 33545639 -53131909 - AluSp/q SINE Alu -14 299 221 1882 157 17 7 chr18 33545858 33546158 -53131390 + AluSx SINE Alu 3 305 -7 233 120 360 0 chr18 33546228 33546278 -53131270 + MER3 DNA MER1_type 45 112 -97 * 323 146 0 0 chr18 33546245 33546293 -53131255 + MER33 DNA MER1_type 33 80 -244 2272 101 0 10 chr18 33546294 33546600 -53130948 + AluSx SINE Alu 1 303 -9 1549 128 9 0 chr18 33547036 33547263 -53130285 + AluSg/x SINE Alu 84 312 0 2591 50 3 7 chr18 33547334 33547635 -53129913 + AluY SINE Alu 1 300 -11 817 163 116 29 chr18 33547907 33548054 -53129494 - AluJb SINE Alu -12 300 134 2052 103 23 10 chr18 33548054 33548355 -53129193 - AluSc SINE Alu -4 305 1 817 163 116 29 chr18 33548355 33548379 -53129169 - AluJb SINE Alu -178 134 114 268 291 0 12 chr18 33548479 33548573 -53128975 - L1ME LINE L1 -516 5605 5516 241 178 41 14 chr18 33548789 33548862 -53128686 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1828 147 7 14 chr18 33548863 33549148 -53128400 + AluSx SINE Alu 1 283 -29 2409 89 0 37 chr18 33549148 33549472 -53128076 + AluSq SINE Alu 1 312 -1 737 228 17 11 chr18 33549498 33549678 -53127870 - MIR SINE MIR -77 185 5 1538 173 6 80 chr18 33551343 33551656 -53125892 - AluJo SINE Alu -20 292 3 25 0 0 0 chr18 33551656 33551681 -53125867 + AT_rich Low_complexity Low_complexity 1 25 0 822 115 0 43 chr18 33551898 33552037 -53125511 - FLAM_C SINE Alu 0 133 1 524 316 52 41 chr18 33552043 33552312 -53125236 + L2 LINE L2 2970 3241 -31 2348 107 0 0 chr18 33552349 33552648 -53124900 + AluSx SINE Alu 1 299 -13 1024 107 0 0 chr18 33553082 33553213 -53124335 - AluSq/x SINE Alu -182 131 1 6048 127 10 1 chr18 33553215 33554358 -53123190 - L1MA3 LINE L1 -170 6135 4981 675 210 0 0 chr18 33555457 33555581 -53121967 + FLAM_A SINE Alu 12 135 -7 2425 56 7 0 chr18 33555603 33555891 -53121657 - AluY SINE Alu -21 290 1 333 370 64 12 chr18 33556042 33556291 -53121257 + L2 LINE L2 2810 3071 -201 186 361 0 16 chr18 33556512 33556573 -53120975 - L2 LINE L2 -54 3218 3159 408 296 255 0 chr18 33556615 33556811 -53120737 - MIR SINE MIR -12 250 5 351 286 82 35 chr18 33557297 33557468 -53120080 + MIR SINE MIR 58 236 -26 2865 210 39 15 chr18 33557487 33557505 -53120043 + L1MD2 LINE L1 5315 5331 -837 2340 99 0 22 chr18 33557505 33557819 -53119729 + AluSq SINE Alu 1 307 -6 2865 210 39 15 chr18 33557819 33558485 -53119063 + L1MD2 LINE L1 5331 6003 -165 1892 112 38 51 chr18 33558537 33558851 -53118697 - AluSx SINE Alu 0 312 3 358 115 0 0 chr18 33558851 33558903 -53118645 - MSTA LTR MaLR -375 53 2 279 79 0 0 chr18 33558953 33558991 -53118557 + (T)n Simple_repeat Simple_repeat 1 38 0 359 167 17 0 chr18 33559005 33559065 -53118483 - AluSg/x SINE Alu -113 189 129 296 197 0 15 chr18 33559069 33559135 -53118413 - MSTA LTR MaLR -363 65 1 1187 150 0 42 chr18 33559186 33559399 -53118149 - AluSx SINE Alu -108 204 1 291 270 111 42 chr18 33559399 33559588 -53117960 + L1ME LINE L1 5604 5805 -316 1915 134 14 0 chr18 33559784 33560103 -53117445 - AluSq SINE Alu 0 327 5 2255 86 3 0 chr18 33560110 33560402 -53117146 - AluSc SINE Alu -16 293 1 2280 98 0 30 chr18 33560739 33561044 -53116504 + AluSx SINE Alu 1 296 -16 449 289 54 0 chr18 33561183 33561332 -53116216 + MIR SINE MIR 64 220 -42 2373 60 0 3 chr18 33561542 33561826 -53115722 + AluY SINE Alu 1 283 -28 327 253 130 32 chr18 33562058 33562212 -53115336 - MIR SINE MIR -19 243 75 1708 148 11 0 chr18 33562526 33562790 -53114758 + AluSp SINE Alu 39 305 -8 1527 153 71 39 chr18 33562904 33563186 -53114362 + AluJb SINE Alu 4 294 -18 2135 124 3 0 chr18 33563492 33563798 -53113750 - AluSq SINE Alu -6 307 1 225 326 85 28 chr18 33564182 33564323 -53113225 - L2 LINE L2 -18 3295 3147 1903 155 0 7 chr18 33564420 33564724 -53112824 + AluJo SINE Alu 1 302 -10 1419 175 71 26 chr18 33564779 33565087 -53112461 - THE1C LTR MaLR -8 367 46 2481 73 7 0 chr18 33565102 33565405 -53112143 + AluSp SINE Alu 1 305 -8 25 0 0 0 chr18 33565406 33565431 -53112117 + AT_rich Low_complexity Low_complexity 1 25 0 2224 91 3 32 chr18 33565729 33566038 -53111510 + AluSp SINE Alu 1 300 -13 199 310 35 0 chr18 33566357 33566415 -53111133 - L3 LINE CR1 -7 1570 1511 361 343 112 53 chr18 33566486 33566731 -53110817 - L3 LINE CR1 -409 1168 894 2191 122 0 7 chr18 33566731 33567035 -53110513 - AluSp SINE Alu -11 302 1 361 343 112 53 chr18 33567035 33567145 -53110403 - L3 LINE CR1 -683 894 792 1077 222 0 0 chr18 33567175 33567364 -53110184 - MER5A DNA MER1_type 0 189 1 977 223 0 0 chr18 33567386 33567552 -53109996 + FRAM SINE Alu 1 166 0 197 232 320 32 chr18 33567789 33567914 -53109634 + MIR3 SINE MIR 41 201 -7 2305 91 0 23 chr18 33568561 33568868 -53108680 + AluSg SINE Alu 1 300 -10 437 254 28 39 chr18 33569376 33569557 -53107991 - L1MC5 LINE L1 -420 7541 7363 198 0 0 0 chr18 33569665 33569687 -53107861 + (TC)n Simple_repeat Simple_repeat 1 22 0 2104 128 24 0 chr18 33569687 33569985 -53107563 - AluSx SINE Alu -7 305 1 1073 98 0 0 chr18 33569985 33570118 -53107430 - AluSg SINE Alu -177 133 1 2349 84 3 7 chr18 33570352 33570650 -53106898 - AluSp SINE Alu -15 298 2 189 0 0 0 chr18 33570780 33570801 -53106747 + (TTTTG)n Simple_repeat Simple_repeat 1 21 0 2084 109 4 0 chr18 33570805 33571080 -53106468 - AluSx SINE Alu -35 277 2 1544 163 74 7 chr18 33571550 33571668 -53105880 + AluJo SINE Alu 1 110 -202 216 86 0 0 chr18 33571668 33571703 -53105845 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1544 163 74 7 chr18 33571703 33571854 -53105694 + AluJo SINE Alu 110 288 -24 29 0 0 0 chr18 33571855 33571884 -53105664 + AT_rich Low_complexity Low_complexity 1 29 0 1182 178 23 23 chr18 33572958 33573177 -53104371 + MER20 DNA MER1_type 1 219 0 371 256 44 0 chr18 33573904 33573994 -53103554 - MLT1I LTR MaLR -260 149 56 2477 97 0 0 chr18 33574182 33574490 -53103058 - AluSx SINE Alu -4 308 1 279 237 54 21 chr18 33574659 33574752 -53102796 + MER5A DNA MER1_type 7 102 -87 322 274 57 0 chr18 33574798 33574904 -53102644 + L2 LINE L2 2543 2654 -660 1086 90 0 0 chr18 33574923 33575056 -53102492 + AluSq/x SINE Alu 1 133 -180 2398 96 3 0 chr18 33575059 33575360 -53102188 + AluSp SINE Alu 1 302 -11 269 247 10 82 chr18 33575361 33575458 -53102090 + L2 LINE L2 2666 2755 -559 1661 186 23 10 chr18 33575951 33576258 -53101290 - AluJo SINE Alu -1 311 1 750 306 91 35 chr18 33576270 33576771 -53100777 + L2 LINE L2 2766 3298 -15 681 113 35 70 chr18 33576863 33576978 -53100570 + FAM SINE Alu 47 157 -28 2213 92 3 61 chr18 33576982 33577308 -53100240 - AluSx SINE Alu -5 307 1 2015 148 3 3 chr18 33577440 33577737 -53099811 - AluJb SINE Alu -15 297 1 248 253 136 65 chr18 33577880 33578034 -53099514 + L1MB2 LINE L1 5609 5773 -348 1047 165 0 17 chr18 33578136 33578312 -53099236 + FRAM SINE Alu 1 171 -5 212 254 48 0 chr18 33578478 33578541 -53099007 + L2 LINE L2 2898 2963 -309 1122 191 13 43 chr18 33578766 33579062 -53098486 - MLT1A2 LTR MaLR 0 374 1 211 319 22 33 chr18 33579188 33579279 -53098269 + L2 LINE L2 3220 3309 -4 2278 85 0 0 chr18 33579669 33579976 -53097572 - AluSx SINE Alu 0 307 1 640 179 114 0 chr18 33580213 33580353 -53097195 + L1MB2 LINE L1 5965 6120 -51 1372 76 71 0 chr18 33580355 33580539 -53097009 + AluY SINE Alu 101 297 -14 2084 114 0 29 chr18 33580552 33580858 -53096690 + AluSg SINE Alu 1 297 -13 244 196 0 0 chr18 33580858 33580909 -53096639 + L1MB2 LINE L1 6121 6171 0 630 146 16 49 chr18 33581234 33581357 -53096191 - MLT1B LTR MaLR -269 121 3 457 110 0 49 chr18 33581360 33581442 -53096106 + LTR41 LTR ERVL 690 767 -6 213 178 0 0 chr18 33582127 33582172 -53095376 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 33 0 0 chr18 33582174 33582204 -53095344 + AT_rich Low_complexity Low_complexity 1 30 0 532 107 0 0 chr18 33582213 33582288 -53095260 - LTR23 LTR ERV1 -34 403 329 1797 165 32 3 chr18 33583441 33583726 -53093822 + AluJo SINE Alu 1 293 -19 200 253 13 0 chr18 33583761 33583836 -53093712 + GA-rich Low_complexity Low_complexity 1 76 0 2042 117 4 0 chr18 33583885 33584197 -53093351 + AluSx SINE Alu 1 313 0 229 282 34 51 chr18 33584956 33585073 -53092475 - LTR33A LTR ERVL -9 514 400 423 295 62 62 chr18 33585123 33585185 -53092363 - LTR33A LTR ERVL -233 288 228 393 22 0 0 chr18 33585185 33585231 -53092317 + (GA)n Simple_repeat Simple_repeat 2 47 0 2167 118 3 3 chr18 33585231 33585536 -53092012 + AluSq SINE Alu 3 307 -6 423 295 62 62 chr18 33585536 33585722 -53091826 - LTR33A LTR ERVL -292 229 1 779 280 68 63 chr18 33585733 33586032 -53091516 - MLT1L LTR MaLR -12 603 307 818 175 48 0 chr18 33586032 33586158 -53091390 - FLAM_A SINE Alu 0 133 2 1749 164 13 26 chr18 33586167 33586337 -53091211 - AluJb SINE Alu -12 300 134 2227 102 7 0 chr18 33586337 33586630 -53090918 - AluSp SINE Alu -18 295 1 1749 164 13 26 chr18 33586630 33586763 -53090785 - AluJb SINE Alu -178 134 1 779 280 68 63 chr18 33586763 33586882 -53090666 - MLT1L LTR MaLR -315 300 173 2174 139 46 16 chr18 33587010 33587378 -53090170 + MER21A LTR ERV1 553 931 0 1840 182 90 43 chr18 33587387 33587810 -53089738 + LTR47B LTR ERVL 1 443 0 1959 142 10 6 chr18 33588226 33588537 -53089011 - AluSx SINE Alu 0 312 1 2117 143 0 0 chr18 33589701 33590002 -53087546 + AluSx SINE Alu 1 301 -11 2172 106 13 0 chr18 33590704 33591005 -53086543 - AluSx SINE Alu -7 305 1 338 132 0 0 chr18 33591014 33591067 -53086481 - Alu SINE Alu 0 300 248 271 143 0 0 chr18 33591097 33591173 -53086375 + Alu SINE Alu 243 318 0 216 238 0 0 chr18 33592452 33592494 -53085054 + (CCG)n Simple_repeat Simple_repeat 2 43 0 203 241 0 38 chr18 33592809 33592888 -53084660 + (CCCG)n Simple_repeat Simple_repeat 2 77 0 * 219 217 0 0 chr18 33592843 33592889 -53084659 + CT-rich Low_complexity Low_complexity 4 49 0 313 275 20 57 chr18 33593570 33593690 -53083858 + MER5A DNA MER1_type 15 138 -48 1098 36 0 29 chr18 33593691 33593828 -53083720 - AluY SINE Alu -178 133 1 684 146 10 0 chr18 33594241 33594344 -53083204 + U13 snRNA snRNA 1 104 0 1612 194 0 7 chr18 33594916 33595209 -53082339 - AluJb SINE Alu -21 291 1 1654 154 33 33 chr18 33596462 33596768 -53080780 - AluJo SINE Alu -5 307 2 27 22 0 22 chr18 33597205 33597234 -53080314 + AT_rich Low_complexity Low_complexity 1 30 -14 1710 120 12 120 chr18 33597234 33597560 -53079988 - AluSx SINE Alu -21 291 1 27 22 0 22 chr18 33597560 33597575 -53079973 + AT_rich Low_complexity Low_complexity 30 44 0 579 155 0 0 chr18 33597612 33597715 -53079833 + (TG)n Simple_repeat Simple_repeat 2 104 0 1326 113 11 0 chr18 33597827 33598004 -53079544 - AluSx SINE Alu -133 179 1 904 256 4 36 chr18 33598290 33598567 -53078981 - AluJo SINE Alu -44 268 1 385 307 29 0 chr18 33598659 33598799 -53078749 + L1M4 LINE L1 4072 4215 -1931 419 275 116 16 chr18 33598836 33599207 -53078341 + L1M4 LINE L1 4298 4705 -1441 33 43 0 0 chr18 33599296 33599343 -53078205 + AT_rich Low_complexity Low_complexity 1 47 0 2179 109 7 0 chr18 33599350 33599644 -53077904 - AluSx SINE Alu -16 296 1 236 314 93 31 chr18 33599672 33599898 -53077650 + L1M4 LINE L1 4795 5034 -1112 458 252 68 34 chr18 33600631 33600778 -53076770 - HAL1 LINE L1 -919 1588 1437 2276 88 0 7 chr18 33600790 33601120 -53076428 - AluY SINE Alu 0 311 1 2150 109 13 13 chr18 33601363 33601675 -53075873 - AluSx SINE Alu 0 312 1 2116 97 14 4 chr18 33601765 33602070 -53075478 - AluSg SINE Alu 0 308 1 1994 123 28 0 chr18 33602125 33602409 -53075139 - AluSx SINE Alu -20 292 1 1636 195 60 64 chr18 33602413 33602916 -53074632 - L1ME3A LINE L1 -6 6164 5664 1414 168 57 64 chr18 33602917 33603214 -53074334 - AluJo SINE Alu -9 303 9 490 237 162 17 chr18 33603223 33603396 -53074152 - L1ME3A LINE L1 -501 5669 5472 1710 162 76 0 chr18 33603396 33603686 -53073862 - AluJb SINE Alu 0 312 1 741 213 0 0 chr18 33603704 33603826 -53073722 - FLAM_A SINE Alu -10 123 2 1908 157 7 0 chr18 33603861 33604161 -53073387 + AluJb SINE Alu 2 303 -9 1709 161 3 29 chr18 33604237 33604547 -53073001 - AluJo SINE Alu -10 302 1 390 296 48 53 chr18 33604601 33604790 -53072758 - MIR SINE MIR -1 261 74 2377 85 0 0 chr18 33605040 33605333 -53072215 - AluY SINE Alu -17 294 2 341 263 0 40 chr18 33605594 33605693 -53071855 - MIR SINE MIR -113 149 55 2187 106 13 3 chr18 33606657 33606959 -53070589 + AluSp SINE Alu 1 305 -8 1708 167 58 4 chr18 33607337 33607612 -53069936 - AluJb SINE Alu -22 290 1 226 353 126 0 chr18 33609322 33609441 -53068107 + L2 LINE L2 3103 3236 -36 263 309 0 15 chr18 33609579 33609647 -53067901 + L2 LINE L2 2570 2636 -678 2180 113 0 0 chr18 33609717 33610001 -53067547 + AluSx SINE Alu 1 284 -28 294 95 0 0 chr18 33610001 33610043 -53067505 + (CA)n Simple_repeat Simple_repeat 2 43 0 494 235 106 60 chr18 33610177 33610394 -53067154 + MIR SINE MIR 1 227 -35 35 0 0 0 chr18 33610770 33610805 -53066743 + AT_rich Low_complexity Low_complexity 1 35 0 1558 153 0 99 chr18 33610806 33611139 -53066409 - AluJb SINE Alu -2 300 1 2148 106 6 16 chr18 33611146 33611458 -53066090 - AluSq SINE Alu -4 309 1 229 231 38 131 chr18 33611506 33611666 -53065882 - LTR33 LTR ERVL -8 513 369 523 257 218 60 chr18 33612453 33612509 -53065039 - L1M4 LINE L1 -844 5302 5256 2218 98 7 0 chr18 33612509 33612795 -53064753 + AluSx SINE Alu 1 288 -24 2321 79 0 3 chr18 33612805 33613118 -53064430 + AluSg SINE Alu 2 313 0 523 257 218 60 chr18 33613118 33613430 -53064118 - L1M4 LINE L1 -897 5249 4862 685 183 0 35 chr18 33613516 33613658 -53063890 - AluJo SINE Alu -175 137 1 1938 125 3 11 chr18 33613666 33613982 -53063566 - AluSx SINE Alu 0 314 1 590 268 105 70 chr18 33614030 33614459 -53063089 - L1M4 LINE L1 -1705 4441 3998 187 289 155 10 chr18 33614528 33614625 -53062923 - MER5B DNA MER1_type -22 156 46 21 0 0 0 chr18 33614802 33614823 -53062725 + AT_rich Low_complexity Low_complexity 1 21 0 1911 122 37 3 chr18 33615120 33615416 -53062132 + AluSx SINE Alu 1 306 -6 2240 108 3 0 chr18 33615472 33615768 -53061780 + AluSp SINE Alu 1 297 -16 356 234 119 40 chr18 33615769 33615996 -53061552 - Charlie7 DNA MER1_type -484 2128 1884 425 192 119 11 chr18 33616291 33616468 -53061080 - Charlie7 DNA MER1_type -973 1639 1444 2223 101 0 0 chr18 33616468 33616755 -53060793 + AluSx SINE Alu 1 287 -25 463 311 16 11 chr18 33616822 33617005 -53060543 - Charlie7 DNA MER1_type -2362 250 67 21 57 0 0 chr18 33617222 33617257 -53060291 + AT_rich Low_complexity Low_complexity 1 35 0 2400 90 0 0 chr18 33617579 33617879 -53059669 - AluSq SINE Alu -13 300 1 23 33 0 0 chr18 33617879 33617909 -53059639 + AT_rich Low_complexity Low_complexity 1 30 0 485 137 30 114 chr18 33618364 33618495 -53059053 + MER119 DNA MER1_type 464 583 0 910 106 8 15 chr18 33619577 33619709 -53057839 + FLAM_C SINE Alu 1 131 -2 773 139 15 44 chr18 33620038 33620175 -53057373 + FLAM_C SINE Alu 1 133 0 2305 89 0 0 chr18 33621724 33622016 -53055532 + AluY SINE Alu 1 292 -19 21 0 0 0 chr18 33622096 33622117 -53055431 + AT_rich Low_complexity Low_complexity 1 21 0 2001 147 0 0 chr18 33622183 33622469 -53055079 + AluSx SINE Alu 3 288 -24 595 195 23 16 chr18 33622595 33622723 -53054825 - FLAM_A SINE Alu 0 142 14 231 283 0 0 chr18 33623997 33624050 -53053498 + (TATG)n Simple_repeat Simple_repeat 3 55 0 1282 171 14 0 chr18 33626323 33626533 -53051015 + AluJb SINE Alu 85 300 -12 1890 75 132 4 chr18 33626533 33626798 -53050750 - AluSq SINE Alu -14 299 1 321 320 73 20 chr18 33626995 33627145 -53050403 - L1ME3A LINE L1 -68 6102 5945 1936 142 10 0 chr18 33627489 33627777 -53049771 - AluSx SINE Alu -21 291 1 2043 101 17 11 chr18 33627786 33628073 -53049475 - AluSx SINE Alu -19 293 5 270 161 65 0 chr18 33628401 33628463 -53049085 + MIR SINE MIR 160 225 -37 614 135 0 0 chr18 33628629 33628718 -53048830 - AluJb SINE Alu -181 131 43 287 203 145 0 chr18 33628741 33628810 -53048738 - FRAM/FAM SINE Alu -88 78 1 477 66 40 0 chr18 33628915 33628991 -53048557 + AluSp/q SINE Alu 235 313 0 956 183 150 53 chr18 33629377 33629457 -53048091 - Charlie1 DNA MER1_type -6 2755 2684 2016 155 14 34 chr18 33629457 33629811 -53047737 + MER7A DNA MER2_type 2 346 0 956 183 150 53 chr18 33629811 33629851 -53047697 - Charlie1 DNA MER1_type -77 2684 2649 715 179 8 15 chr18 33629851 33629985 -53047563 + FLAM_C SINE Alu 1 133 0 956 183 150 53 chr18 33629985 33630256 -53047292 - Charlie1 DNA MER1_type -112 2649 2325 1774 157 0 39 chr18 33630281 33630586 -53046962 + AluJb SINE Alu 11 303 -9 2446 67 0 3 chr18 33630700 33630999 -53046549 + AluY SINE Alu 1 298 -13 22 0 0 0 chr18 33631119 33631141 -53046407 + AT_rich Low_complexity Low_complexity 1 22 0 1981 147 0 10 chr18 33631536 33631835 -53045713 - AluSx SINE Alu -16 296 1 244 186 0 0 chr18 33632013 33632056 -53045492 - L1ME3A LINE L1 -2163 5645 5603 430 250 46 0 chr18 33632206 33632314 -53045234 - L2 LINE L2 0 3313 3201 189 0 0 0 chr18 33632331 33632352 -53045196 + (TA)n Simple_repeat Simple_repeat 2 22 0 25 40 0 20 chr18 33632413 33632436 -53045112 + AT_rich Low_complexity Low_complexity 1 23 -26 1699 134 17 41 chr18 33632436 33632598 -53044950 - AluJb SINE Alu -27 285 132 2486 65 3 3 chr18 33632598 33632905 -53044643 - AluSp SINE Alu -6 307 1 1699 134 17 41 chr18 33632905 33633034 -53044514 - AluJb SINE Alu -180 132 1 25 40 0 20 chr18 33633034 33633060 -53044488 + AT_rich Low_complexity Low_complexity 23 49 0 204 291 0 81 chr18 33633226 33633312 -53044236 - L2 LINE L2 -343 2971 2893 1661 124 0 66 chr18 33633340 33633614 -53043934 - AluSx SINE Alu -8 304 49 274 278 49 53 chr18 33633633 33633796 -53043752 + MIR SINE MIR 102 262 0 1738 172 0 23 chr18 33634011 33634313 -53043235 - AluJb SINE Alu -17 295 1 2460 62 7 0 chr18 33634326 33634630 -53042918 - AluY SINE Alu -5 306 1 3821 118 76 58 chr18 33634938 33635890 -53041658 + pTR5 LTR ERV1 738 2021 -417 279 224 41 31 chr18 33635894 33635992 -53041556 + LTR30 LTR ERV1 544 642 -80 1365 87 23 9 chr18 33635995 33636213 -53041335 + pTR5 LTR ERV1 172 392 -2046 736 310 231 25 chr18 33636353 33636986 -53040562 - L3 LINE CR1 -348 1229 467 197 309 200 24 chr18 33637024 33637189 -53040359 - L3 LINE CR1 -1204 373 180 727 138 0 109 chr18 33637191 33637329 -53040219 + AluJb SINE Alu 1 123 -189 1826 182 0 7 chr18 33637718 33638025 -53039523 + AluJb SINE Alu 1 305 -7 346 175 49 70 chr18 33638681 33638824 -53038724 - Charlie5 DNA MER1_type -117 2495 2356 6542 61 19 5 chr18 33638825 33639682 -53037866 + L1PA7 LINE L1 5285 6153 -1 1668 187 53 2 chr18 33640057 33640469 -53037079 + L1M2 LINE L1 2456 2888 -3961 3576 188 49 0 chr18 33640497 33641155 -53036393 + L1PA15-16 LINE L1 2 691 -6158 1601 203 28 131 chr18 33641401 33641673 -53035875 + MER77 LTR ERV1 1 191 -414 2465 108 63 31 chr18 33641673 33642088 -53035460 + MSTA LTR MaLR 1 428 0 1601 203 28 131 chr18 33642088 33642356 -53035192 + MER77 LTR ERV1 191 485 -120 2245 165 44 2 chr18 33643327 33643758 -53033790 + L1PA16 LINE L1 5710 6158 -8 325 301 117 0 chr18 33644242 33644345 -53033203 + MER5B DNA MER1_type 2 116 -62 1392 217 70 27 chr18 33644345 33644787 -53032761 - MLT1C LTR MaLR 0 467 7 227 271 229 17 chr18 33644869 33644987 -53032561 - MER5A DNA MER1_type 0 189 47 476 275 52 45 chr18 33645117 33645386 -53032162 + L1MC4 LINE L1 7300 7570 -472 298 118 20 0 chr18 33645412 33645463 -53032085 + L1P LINE L1 4730 4781 -1365 292 217 0 0 chr18 33645596 33645665 -53031883 + L1 LINE L1 4791 4859 -1287 1889 166 74 0 chr18 33645724 33646241 -53031307 + L1P LINE L1 4854 5424 -741 422 113 0 14 chr18 33646346 33646417 -53031131 + (TTCC)n Simple_repeat Simple_repeat 4 73 0 386 217 116 0 chr18 33646650 33646779 -53030769 - L1ME3A LINE L1 0 6170 6027 2284 116 0 3 chr18 33646791 33647101 -53030447 - AluSq SINE Alu -4 309 1 919 309 131 55 chr18 33647789 33648889 -53028659 + L2 LINE L2 1996 3174 -98 432 243 18 114 chr18 33649085 33649220 -53028328 + LTR16C LTR ERVL 190 336 -155 1246 63 0 11 chr18 33649220 33649395 -53028153 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 1674 155 15 4 chr18 33649397 33649662 -53027886 - AluJo SINE Alu -23 289 22 432 243 18 114 chr18 33649662 33649764 -53027784 + LTR16C LTR ERVL 337 392 -99 1484 159 76 23 chr18 33649764 33650028 -53027520 - AluJb SINE Alu -34 278 1 432 243 18 114 chr18 33650028 33650120 -53027428 + LTR16C LTR ERVL 392 491 0 901 206 17 6 chr18 33650133 33650313 -53027235 + MER5A DNA MER1_type 8 189 0 23 0 0 0 chr18 33651304 33651327 -53026221 + AT_rich Low_complexity Low_complexity 1 23 0 403 226 61 35 chr18 33651405 33651520 -53026028 - L2 LINE L2 -10 3303 3186 523 216 223 14 chr18 33651616 33651755 -53025793 - MER5B DNA MER1_type -10 168 1 253 215 32 11 chr18 33651835 33651928 -53025620 - L1MB4 LINE L1 0 6180 6086 1978 126 43 6 chr18 33651930 33652279 -53025269 - L1MA4 LINE L1 -281 6201 5840 4477 169 55 9 chr18 33652280 33653308 -53024240 - L1MA4 LINE L1 -2294 4034 2959 1331 99 50 0 chr18 33653310 33653491 -53024057 - AluSp SINE Alu -11 302 113 23 33 0 0 chr18 33653559 33653589 -53023959 + AT_rich Low_complexity Low_complexity 1 30 0 1040 100 0 0 chr18 33653589 33653719 -53023829 - AluSp SINE Alu -181 132 3 4887 204 32 35 chr18 33653747 33653991 -53023557 - L1MA4 LINE L1 -3402 2926 2683 1065 217 171 8 chr18 33653991 33654249 -53023299 - AluSg SINE Alu 0 300 1 4887 204 32 35 chr18 33654249 33656165 -53021383 - L1MA4 LINE L1 -3645 2683 772 3795 196 7 3 chr18 33656195 33656900 -53020648 - L1MA4 LINE L1 -4620 708 1 980 179 0 0 chr18 33657181 33657337 -53020211 + AluJb SINE Alu 86 241 -71 276 30 0 0 chr18 33657341 33657374 -53020174 + (A)n Simple_repeat Simple_repeat 1 33 0 3751 148 35 17 chr18 33657463 33657524 -53020024 + MER6 DNA MER2_type 1 59 -806 2114 95 25 0 chr18 33657524 33657807 -53019741 + AluSx SINE Alu 21 310 -2 3751 148 35 17 chr18 33657807 33658185 -53019363 + MER6 DNA MER2_type 59 429 -436 2253 138 39 0 chr18 33658185 33658546 -53019002 + THE1C LTR MaLR 1 375 0 3751 148 35 17 chr18 33658546 33658969 -53018579 + MER6 DNA MER2_type 429 865 0 294 269 42 85 chr18 33659050 33659202 -53018346 - MIR SINE MIR -62 146 35 2578 56 0 3 chr18 33659202 33659505 -53018043 - AluY SINE Alu -9 302 1 294 269 42 85 chr18 33659505 33659522 -53018026 - MIR SINE MIR -173 35 19 304 330 27 9 chr18 33659775 33659887 -53017661 - L2 LINE L2 -18 3254 3141 1763 180 0 3 chr18 33660861 33661145 -53016403 - AluJo SINE Alu -28 284 2 184 344 78 43 chr18 33661246 33661476 -53016072 + L2 LINE L2 2943 3180 -92 2335 63 3 30 chr18 33662189 33662492 -53015056 - AluSx SINE Alu -17 295 1 186 311 0 16 chr18 33662680 33662741 -53014807 + L2 LINE L2 3208 3267 -5 1227 113 11 0 chr18 33662925 33663102 -53014446 - AluSg/x SINE Alu 0 312 134 2270 93 0 13 chr18 33663103 33663414 -53014134 - AluSx SINE Alu -5 307 1 2230 97 7 13 chr18 33663418 33663726 -53013822 - AluSx SINE Alu -6 306 1 1490 191 7 48 chr18 33664635 33664959 -53012589 + AluJb SINE Alu 1 312 0 26 0 0 0 chr18 33665072 33665098 -53012450 + AT_rich Low_complexity Low_complexity 1 26 0 658 142 42 33 chr18 33665482 33665602 -53011946 + FLAM_A SINE Alu 1 121 -12 2961 171 23 44 chr18 33665666 33665704 -53011844 + L1MB8 LINE L1 5577 5614 -564 2133 102 54 0 chr18 33665704 33665998 -53011550 - AluY SINE Alu -1 310 1 2961 171 23 44 chr18 33665998 33666569 -53010979 + L1MB8 LINE L1 5614 6173 -5 336 311 19 9 chr18 33666720 33666826 -53010722 - L2 LINE L2 -181 3091 2985 1876 164 0 0 chr18 33666850 33667137 -53010411 + AluJb SINE Alu 5 291 -21 317 285 117 62 chr18 33667322 33667725 -53009823 - L2 LINE L2 -563 2751 2327 300 203 130 32 chr18 33667816 33667939 -53009609 - MIR SINE MIR 0 262 128 * 4016 264 83 41 chr18 33667885 33668953 -53008595 + L2 LINE L2 1355 2522 -791 2522 64 0 0 chr18 33668953 33669248 -53008300 - AluY SINE Alu -16 295 1 4016 264 83 41 chr18 33669248 33669868 -53007680 + L2 LINE L2 2522 3114 -199 1681 246 57 96 chr18 33669873 33670347 -53007201 + MLT2F LTR ERVL 3 494 -169 2314 82 0 0 chr18 33670347 33670640 -53006908 - AluY SINE Alu -18 293 1 1681 246 57 96 chr18 33670640 33670801 -53006747 + MLT2F LTR ERVL 494 613 -50 1165 204 19 10 chr18 33670801 33671007 -53006541 + MER63A DNA MER1_type 3 210 0 1681 246 57 96 chr18 33671007 33671049 -53006499 + MLT2F LTR ERVL 613 655 -8 314 282 137 8 chr18 33671059 33671190 -53006358 + L2 LINE L2 3117 3264 -49 1853 155 24 3 chr18 33671315 33671605 -53005943 - AluSx SINE Alu -16 296 1 236 268 0 0 chr18 33671699 33671755 -53005793 + L2 LINE L2 3258 3313 0 288 281 0 0 chr18 33671848 33671905 -53005643 - L2 LINE L2 -9 3304 3248 2083 130 3 3 chr18 33672254 33672547 -53005001 - AluSx SINE Alu -19 293 1 7930 31 0 8 chr18 33672594 33673705 -53003843 + L1PA5 LINE L1 5074 6177 0 194 319 14 14 chr18 33673710 33673782 -53003766 + L2 LINE L2 3201 3272 0 381 83 0 0 chr18 33674142 33674190 -53003358 - LTR47A LTR ERVL -88 364 317 710 294 73 22 chr18 33674268 33674543 -53003005 + L2 LINE L2 3023 3311 -2 213 254 0 48 chr18 33674748 33674811 -53002737 + C-rich Low_complexity Low_complexity 5 64 0 337 338 52 55 chr18 33675045 33675070 -53002478 + L2 LINE L2 2626 2650 -664 2508 130 11 13 chr18 33675070 33675446 -53002102 - THE1C LTR MaLR 0 375 1 337 338 52 55 chr18 33675446 33675763 -53001785 + L2 LINE L2 2650 2967 -347 336 322 75 35 chr18 33675826 33676053 -53001495 - L1M4 LINE L1 -1194 4952 4717 2227 119 13 10 chr18 33676139 33676450 -53001098 - AluSx SINE Alu 0 312 1 24 0 0 0 chr18 33676581 33676605 -53000943 + AT_rich Low_complexity Low_complexity 1 24 0 782 237 48 118 chr18 33676801 33677240 -53000308 + LTR37A LTR ERV1 19 426 0 2105 101 24 7 chr18 33677696 33677818 -52999730 + AluSq SINE Alu 1 119 -194 369 0 0 0 chr18 33677818 33677859 -52999689 + (CA)n Simple_repeat Simple_repeat 1 41 0 2105 101 24 7 chr18 33677859 33678032 -52999516 + AluSq SINE Alu 119 301 -12 953 101 7 29 chr18 33678255 33678394 -52999154 - AluJo SINE Alu -176 136 1 21 36 0 0 chr18 33678884 33678912 -52998636 + AT_rich Low_complexity Low_complexity 1 28 0 1765 188 37 90 chr18 33679246 33679618 -52997930 - Charlie4a DNA MER1_type -1469 492 102 309 109 0 0 chr18 33679618 33679673 -52997875 + (TCTA)n Simple_repeat Simple_repeat 2 56 0 772 192 0 0 chr18 33679679 33679799 -52997749 - 5S rRNA rRNA 0 121 2 1765 188 37 90 chr18 33679799 33679931 -52997617 - Charlie4a DNA MER1_type -1864 97 8 1044 122 0 0 chr18 33680323 33680487 -52997061 + (TCCA)n Simple_repeat Simple_repeat 4 167 0 329 250 125 0 chr18 33681598 33681702 -52995846 + L2 LINE L2 3197 3313 0 806 137 8 0 chr18 33681938 33682062 -52995486 + AluJo SINE Alu 14 138 -174 3538 183 141 31 chr18 33682143 33682607 -52994941 + Charlie1a DNA MER1_type 1 413 -2348 2251 92 0 0 chr18 33682607 33682921 -52994627 + AluSg SINE Alu 1 314 0 3538 183 141 31 chr18 33682921 33683420 -52994128 + Charlie1a DNA MER1_type 413 1071 -384 5223 167 19 72 chr18 33683936 33684651 -52992897 - L1MC2 LINE L1 -15 6609 5927 243 204 0 0 chr18 33684651 33684695 -52992853 - U5 snRNA snRNA -72 44 1 5223 167 19 72 chr18 33684695 33685053 -52992495 - L1MC2 LINE L1 -697 5927 5552 418 255 0 0 chr18 33685052 33685146 -52992402 - L1MC2 LINE L1 -2303 4123 4030 * 11740 154 80 25 chr18 33685145 33685199 -52992349 - L1MC2 LINE L1 -3859 2567 2517 1871 151 3 17 chr18 33685199 33685497 -52992051 + AluJo SINE Alu 1 294 -18 11740 154 80 25 chr18 33685497 33685854 -52991694 - L1MC2 LINE L1 -3909 2517 2181 2458 46 0 0 chr18 33685854 33686174 -52991374 + AluY SINE Alu 1 320 0 11740 154 80 25 chr18 33686174 33688181 -52989367 - L1MC2 LINE L1 -4245 2181 20 1983 145 112 63 chr18 33688269 33688663 -52988885 + MLT2D LTR ERVL 2 414 0 2050 142 3 3 chr18 33689614 33689917 -52987631 - AluSq SINE Alu -8 305 3 5945 148 33 30 chr18 33689965 33691275 -52986273 - L1MA4 LINE L1 -6 6294 4979 2093 100 0 42 chr18 33691275 33691585 -52985963 - AluSg SINE Alu -13 297 1 5945 148 33 30 chr18 33691585 33691771 -52985777 - L1MA4 LINE L1 -1321 4979 4795 2117 139 0 0 chr18 33692417 33692711 -52984837 - AluSx SINE Alu -14 298 5 24 32 0 0 chr18 33693154 33693185 -52984363 + AT_rich Low_complexity Low_complexity 1 31 0 183 325 208 0 chr18 33694456 33694576 -52982972 - MIR SINE MIR -76 186 42 196 236 73 0 chr18 33695468 33695523 -52982025 + MIR SINE MIR 204 262 0 207 0 0 0 chr18 33695911 33695934 -52981614 + (CAAT)n Simple_repeat Simple_repeat 2 24 0 1229 292 58 64 chr18 33697204 33698313 -52979235 + L2 LINE L2 2118 3223 -90 243 0 0 0 chr18 33698686 33698713 -52978835 + (CA)n Simple_repeat Simple_repeat 2 28 0 21 0 0 0 chr18 33700795 33700816 -52976732 + AT_rich Low_complexity Low_complexity 1 21 0 1992 141 0 43 chr18 33700816 33701142 -52976406 - AluSx SINE Alu 0 312 1 1729 107 27 23 chr18 33701150 33701413 -52976135 - L1PA16 LINE L1 -3 6163 5900 226 209 23 0 chr18 33701605 33701648 -52975900 - MER91 DNA MER1_type 0 140 97 296 208 56 14 chr18 33701894 33701966 -52975582 + MER91A DNA MER1_type 122 196 0 406 307 121 51 chr18 33702053 33702679 -52974869 - L2 LINE L2 -458 2856 2187 215 273 0 0 chr18 33702677 33702721 -52974827 + L2 LINE L2 3210 3253 -19 * 377 108 0 15 chr18 33703066 33703131 -52974417 + (TTCC)n Simple_repeat Simple_repeat 1 64 0 1169 173 264 4 chr18 33703131 33703362 -52974186 - AluSg SINE Alu -7 293 3 306 0 0 0 chr18 33704722 33704756 -52972792 + (CA)n Simple_repeat Simple_repeat 2 35 0 325 289 193 16 chr18 33704930 33705179 -52972369 + L1ME4a LINE L1 5811 6103 -18 392 318 50 22 chr18 33705405 33705584 -52971964 - MIR SINE MIR -78 184 1 2438 164 56 10 chr18 33707043 33707452 -52970096 - MSTA LTR MaLR 0 428 1 335 243 99 53 chr18 33708049 33708081 -52969467 + MER103 DNA DNA 4 33 -133 2251 164 33 20 chr18 33708081 33708471 -52969077 - MSTD LTR MaLR -1 395 1 335 243 99 53 chr18 33708471 33708590 -52968958 + MER103 DNA DNA 33 162 -4 1228 115 73 39 chr18 33709202 33709402 -52968146 - L1MA7 LINE L1 -2 6289 6078 1716 91 0 0 chr18 33709402 33709621 -52967927 - AluSg/x SINE Alu -10 300 82 1228 115 73 39 chr18 33709621 33709654 -52967894 - L1MA7 LINE L1 -213 6078 6048 1438 119 9 57 chr18 33709853 33710030 -52967518 - AluJb SINE Alu -13 299 115 198 0 0 0 chr18 33710030 33710052 -52967496 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2208 104 0 0 chr18 33710052 33710332 -52967216 - AluSg SINE Alu -30 280 1 1438 119 9 57 chr18 33710332 33710380 -52967168 - AluJb SINE Alu -195 117 84 2032 162 0 0 chr18 33712627 33712935 -52964613 + AluSx SINE Alu 1 308 -4 183 205 0 0 chr18 33713156 33713195 -52964353 + CT-rich Low_complexity Low_complexity 2 40 0 2076 98 0 17 chr18 33714404 33714691 -52962857 + AluSx SINE Alu 1 282 -30 235 0 28 28 chr18 33714695 33714731 -52962817 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 292 190 38 60 chr18 33715408 33715592 -52961956 + (TA)n Simple_repeat Simple_repeat 1 180 0 483 318 58 13 chr18 33717241 33717408 -52960140 + MIR SINE MIR 13 186 -61 2500 61 0 0 chr18 33718965 33719262 -52958286 + AluY SINE Alu 1 297 -14 516 105 0 0 chr18 33719366 33719442 -52958106 + (TA)n Simple_repeat Simple_repeat 2 77 0 297 224 14 168 chr18 33719819 33719962 -52957586 + MIR SINE MIR 17 137 -71 644 239 23 0 chr18 33720177 33720307 -52957241 + FLAM_C SINE Alu 1 133 0 954 250 67 22 chr18 33721958 33722274 -52955274 - LTR16A LTR ERVL -10 440 111 264 59 0 0 chr18 33723224 33723258 -52954290 + (CA)n Simple_repeat Simple_repeat 2 35 0 3166 178 43 109 chr18 33724255 33725011 -52952537 - Charlie1a DNA MER1_type -1313 1448 767 1694 154 11 7 chr18 33725011 33725284 -52952264 + AluJo SINE Alu 17 290 -22 3166 178 43 109 chr18 33725284 33725483 -52952065 - Charlie1a DNA MER1_type -1994 767 556 3834 164 113 35 chr18 33725483 33726158 -52951390 - L1MD1 LINE L1 -2 6240 5477 2518 164 43 7 chr18 33726158 33726603 -52950945 - L1MC1 LINE L1 0 6333 5873 3834 164 113 35 chr18 33726603 33726821 -52950727 - L1MD1 LINE L1 -765 5477 5277 244 191 43 0 chr18 33729261 33729308 -52948240 + L2 LINE L2 3156 3204 -68 23 33 0 0 chr18 33731262 33731292 -52946256 + AT_rich Low_complexity Low_complexity 1 30 0 283 372 0 19 chr18 33732786 33732942 -52944606 + MER117 DNA MER1_type 45 197 0 1126 309 73 12 chr18 33733135 33733617 -52943931 + L3 LINE CR1 1057 1567 -10 1541 157 142 22 chr18 33734663 33734931 -52942617 - AluSg SINE Alu 0 300 1 1909 139 20 7 chr18 33734946 33735247 -52942301 - AluSg SINE Alu -4 306 2 571 250 144 6 chr18 33735248 33735408 -52942140 - MER5A DNA MER1_type -1 188 7 1830 112 4 0 chr18 33736391 33736642 -52940906 - AluSq SINE Alu -17 296 45 300 53 0 0 chr18 33737478 33737516 -52940032 + (GA)n Simple_repeat Simple_repeat 1 38 0 2403 62 14 0 chr18 33739450 33739738 -52937810 - AluSp SINE Alu -21 292 1 238 239 292 0 chr18 33740139 33740269 -52937279 - L2 LINE L2 -14 3299 3132 3797 98 0 56 chr18 33742988 33743542 -52934006 + MER1A DNA MER1_type 4 526 -3 253 256 156 0 chr18 33744865 33744955 -52932593 - MIR SINE MIR -108 154 51 706 61 0 0 chr18 33745452 33745534 -52932014 + AluY SINE Alu 2 83 -235 3481 55 27 7 chr18 33745534 33745973 -52931575 + LTR7 LTR ERV1 1 448 -2 1552 73 5 36 chr18 33745976 33746195 -52931353 + AluSc SINE Alu 80 291 -18 884 190 0 52 chr18 33746293 33746467 -52931081 - FRAM SINE Alu -1 165 1 2252 98 3 19 chr18 33747021 33747336 -52930212 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr18 33747982 33748010 -52929538 + AT_rich Low_complexity Low_complexity 1 28 0 2440 58 7 0 chr18 33748511 33748806 -52928742 - AluY SINE Alu -14 297 1 3777 119 72 67 chr18 33749101 33750093 -52927455 + pTR5 LTR ERV1 727 2034 -404 648 242 10 10 chr18 33750193 33750383 -52927165 + L1MC/D LINE L1 5291 5480 -836 1049 149 12 0 chr18 33750518 33750686 -52926862 - AluSg/x SINE Alu -6 303 134 4616 240 23 60 chr18 33750692 33751698 -52925850 - L1 LINE L1 -837 5309 4268 1830 94 16 75 chr18 33751698 33752005 -52925543 - AluSx SINE Alu -22 290 2 4616 240 23 60 chr18 33752005 33752706 -52924842 - L1 LINE L1 -1878 4268 3716 2167 131 0 0 chr18 33752706 33753012 -52924536 - AluSq SINE Alu -7 306 1 4616 240 23 60 chr18 33753012 33753363 -52924185 - L1 LINE L1 -2430 3716 3354 1061 167 36 16 chr18 33753363 33753555 -52923993 - L1M4 LINE L1 -539 5635 5440 625 264 19 0 chr18 33753564 33753719 -52923829 - Charlie1a DNA MER1_type -1297 158 1 621 298 97 13 chr18 33753831 33754059 -52923489 + MIR SINE MIR 12 258 -4 309 254 57 57 chr18 33754085 33754151 -52923397 + MER94 DNA DNA 11 79 -55 2166 130 0 0 chr18 33754151 33754452 -52923096 + AluSx SINE Alu 1 301 -11 309 254 57 57 chr18 33754452 33754507 -52923041 + MER94 DNA DNA 78 132 -2 1058 243 18 0 chr18 33754568 33754794 -52922754 + MIR SINE MIR 12 241 -21 919 105 55 105 chr18 33754971 33755171 -52922377 + THE1C LTR MaLR 1 190 -185 12040 34 31 2 chr18 33755182 33761037 -52916511 - L1PA3 LINE L1 0 6155 13 1050 141 40 30 chr18 33761037 33761236 -52916312 + THE1C LTR MaLR 175 375 0 247 316 35 26 chr18 33763178 33763292 -52914256 - MIR SINE MIR -36 226 112 1593 197 33 0 chr18 33764646 33764945 -52912603 + AluJo SINE Alu 1 309 -3 849 186 0 7 chr18 33764970 33765110 -52912438 + FLAM_C SINE Alu 2 140 -3 181 184 53 0 chr18 33765534 33765572 -52911976 - MIR SINE MIR -179 83 44 432 305 89 73 chr18 33765750 33766199 -52911349 - MLT1K LTR MaLR -8 580 125 32 0 0 23 chr18 33766275 33766296 -52911252 + AT_rich Low_complexity Low_complexity 1 21 -21 2116 97 0 4 chr18 33766296 33766564 -52910984 + AluSq SINE Alu 21 287 -26 32 0 0 23 chr18 33766564 33766585 -52910963 + AT_rich Low_complexity Low_complexity 21 42 0 901 218 18 12 chr18 33767011 33767176 -52910372 - FAM SINE Alu -9 166 1 362 316 97 35 chr18 33767325 33767667 -52909881 + L1M4 LINE L1 4153 4515 -1631 1456 122 160 129 chr18 33768603 33769054 -52908494 + MER4C LTR ERV1 1 465 0 2708 154 32 58 chr18 33769514 33770084 -52907464 + MER34B LTR ERV1 11 565 0 * 2724 135 36 14 chr18 33770084 33770528 -52907020 + MLT1C LTR MaLR 14 467 0 337 300 44 0 chr18 33770549 33770639 -52906909 + L2 LINE L2 3156 3249 -23 210 71 0 0 chr18 33771414 33771442 -52906106 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 2124 131 0 3 chr18 33772459 33772765 -52904783 - AluJb SINE Alu -7 305 1 2121 120 33 0 chr18 33772984 33773285 -52904263 - AluSx SINE Alu -1 311 1 21 36 0 0 chr18 33773367 33773395 -52904153 + AT_rich Low_complexity Low_complexity 1 28 0 397 230 11 0 chr18 33773871 33773958 -52903590 - L2 LINE L2 0 3313 3226 2817 91 10 5 chr18 33774189 33774322 -52903226 - L1PB2 LINE L1 -1 6150 6018 3238 202 49 11 chr18 33774322 33775524 -52902024 - L1PA10 LINE L1 -154 6014 4769 247 39 0 78 chr18 33775524 33775575 -52901973 + (TTTTG)n Simple_repeat Simple_repeat 2 48 0 1768 101 89 4 chr18 33775612 33775903 -52901645 - AluSg SINE Alu 0 313 1 276 331 112 12 chr18 33776116 33776285 -52901263 + L2 LINE L2 3124 3309 -4 2557 69 0 0 chr18 33777756 33778061 -52899487 - AluY SINE Alu -6 305 1 5420 84 0 4 chr18 33779677 33780393 -52897155 - THE1A-int LTR MaLR -867 713 1 1321 97 6 0 chr18 33780393 33780569 -52896979 - THE1A LTR MaLR 0 355 179 668 179 8 37 chr18 33780599 33780733 -52896815 - FLAM_C SINE Alu -3 130 1 2128 103 7 3 chr18 33780734 33781026 -52896522 + L1PB1 LINE L1 5858 6150 -1 22 0 0 0 chr18 33781026 33781048 -52896500 + AT_rich Low_complexity Low_complexity 1 22 0 371 252 126 13 chr18 33781113 33781264 -52896284 + MLT1J LTR MaLR 3 170 -341 1691 118 0 4 chr18 33781316 33781544 -52896004 + AluSx SINE Alu 20 246 -66 249 284 86 35 chr18 33781637 33781834 -52895714 + MLT1L LTR MaLR 404 610 -5 1616 191 95 0 chr18 33782295 33782610 -52894938 - MLT1A1 LTR MaLR -2 363 19 226 382 41 0 chr18 33782875 33783045 -52894503 + L2 LINE L2 2550 2726 -588 946 138 69 11 chr18 33783350 33783524 -52894024 - MER2 DNA MER2_type -134 211 28 436 298 37 58 chr18 33783725 33783852 -52893696 + MIR SINE MIR 19 142 -120 2287 110 3 0 chr18 33783852 33784151 -52893397 + AluSp SINE Alu 1 300 -13 436 298 37 58 chr18 33784151 33784214 -52893334 + MIR SINE MIR 142 205 -57 22 0 0 0 chr18 33785194 33785216 -52892332 + AT_rich Low_complexity Low_complexity 1 22 0 1944 97 12 0 chr18 33786233 33786505 -52891043 + AluSc SINE Alu 29 303 0 1703 155 4 11 chr18 33786592 33786857 -52890691 - AluJb SINE Alu -16 296 34 239 77 128 0 chr18 33786864 33786903 -52890645 + Alu SINE Alu 1 44 -258 1914 142 0 0 chr18 33787439 33787713 -52889835 + AluJb SINE Alu 1 274 -38 271 62 0 42 chr18 33787713 33787761 -52889787 + (GAAA)n Simple_repeat Simple_repeat 3 48 0 1327 146 0 25 chr18 33787884 33788083 -52889465 - AluSq SINE Alu -119 194 1 380 339 91 6 chr18 33788710 33788875 -52888673 + MIR3 SINE MIR 20 198 -10 182 300 125 38 chr18 33789383 33789463 -52888085 - L2 LINE L2 -61 3211 3125 626 103 62 0 chr18 33790251 33790348 -52887200 - HY1 scRNA scRNA -7 105 3 180 0 0 0 chr18 33790350 33790370 -52887178 + (T)n Simple_repeat Simple_repeat 1 20 0 244 191 43 0 chr18 33792611 33792658 -52884890 + L2 LINE L2 3156 3204 -68 21 36 0 0 chr18 33794612 33794640 -52882908 + AT_rich Low_complexity Low_complexity 1 28 0 283 372 0 19 chr18 33796134 33796290 -52881258 + MER117 DNA MER1_type 45 197 0 1126 309 73 12 chr18 33796483 33796965 -52880583 + L3 LINE CR1 1057 1567 -10 1541 157 142 22 chr18 33798012 33798280 -52879268 - AluSg SINE Alu 0 300 1 1909 139 20 7 chr18 33798295 33798596 -52878952 - AluSg SINE Alu -4 306 2 571 250 144 6 chr18 33798597 33798757 -52878791 - MER5A DNA MER1_type -1 188 7 1830 112 4 0 chr18 33799740 33799991 -52877557 - AluSq SINE Alu -17 296 45 300 53 0 0 chr18 33800827 33800865 -52876683 + (GA)n Simple_repeat Simple_repeat 1 38 0 2403 62 14 0 chr18 33802799 33803087 -52874461 - AluSp SINE Alu -21 292 1 238 239 292 0 chr18 33803488 33803618 -52873930 - L2 LINE L2 -14 3299 3132 3676 102 0 59 chr18 33806341 33806897 -52870651 + MER1A DNA MER1_type 4 526 -3 253 256 156 0 chr18 33808220 33808310 -52869238 - MIR SINE MIR -108 154 51 2004 87 0 58 chr18 33808807 33808890 -52868658 + AluSc SINE Alu 1 87 -222 3404 62 27 7 chr18 33808890 33809329 -52868219 + LTR7 LTR ERV1 1 448 -2 2004 87 0 58 chr18 33809329 33809554 -52867994 + AluSc SINE Alu 87 291 -18 884 190 0 52 chr18 33809652 33809826 -52867722 - FRAM SINE Alu -1 165 1 2252 98 3 19 chr18 33810380 33810695 -52866853 + AluSx SINE Alu 1 310 -2 21 36 0 0 chr18 33811341 33811369 -52866179 + AT_rich Low_complexity Low_complexity 1 28 0 2521 47 7 0 chr18 33811870 33812166 -52865382 - AluY SINE Alu -13 298 1 243 333 29 124 chr18 33812529 33812949 -52864599 + L2 LINE L2 2845 3224 -48 342 0 0 0 chr18 33813439 33813477 -52864071 + (TG)n Simple_repeat Simple_repeat 2 39 0 995 314 64 8 chr18 33813597 33813985 -52863563 + L2 LINE L2 2376 2785 -529 54 16 0 0 chr18 33815652 33815713 -52861835 + AT_rich Low_complexity Low_complexity 1 61 0 330 229 151 50 chr18 33816007 33816186 -52861362 - L1ME LINE L1 -320 5801 5605 224 0 65 0 chr18 33816187 33816218 -52861330 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 873 174 35 0 chr18 33816221 33816365 -52861183 - AluJb SINE Alu -31 281 133 23 0 0 0 chr18 33816523 33816546 -52861002 + AT_rich Low_complexity Low_complexity 1 23 0 1027 189 53 5 chr18 33816778 33816984 -52860564 + MER20 DNA MER1_type 4 219 0 31 58 0 0 chr18 33817203 33817255 -52860293 + AT_rich Low_complexity Low_complexity 1 52 0 2379 226 51 37 chr18 33817516 33817560 -52859988 + L1MC4a LINE L1 5254 5296 -2512 1501 111 13 13 chr18 33817560 33817785 -52859763 + AluSc SINE Alu 79 303 -6 2379 226 51 37 chr18 33817785 33818527 -52859021 + L1MC4a LINE L1 5296 6051 -1757 6342 55 19 5 chr18 33818619 33819475 -52858073 - L1PA7 LINE L1 0 6154 5287 727 256 69 51 chr18 33819487 33819593 -52857955 + L1MC4a LINE L1 6198 6301 -1507 1886 137 77 8 chr18 33819593 33819944 -52857604 + THE1C LTR MaLR 1 375 0 727 256 69 51 chr18 33819944 33820227 -52857321 + L1MC4a LINE L1 6301 6594 -1214 336 103 0 0 chr18 33820237 33820295 -52857253 + (CA)n Simple_repeat Simple_repeat 2 59 0 2669 250 71 43 chr18 33820317 33821560 -52855988 + L1MC4 LINE L1 6765 8041 -1 338 301 103 39 chr18 33821962 33822165 -52855383 - L1M4 LINE L1 -2042 4104 3889 1013 132 7 0 chr18 33822165 33822345 -52855203 - AluSg/x SINE Alu 0 312 137 240 293 96 32 chr18 33822395 33822583 -52854965 - L1M4 LINE L1 -2301 3845 3646 2287 110 0 0 chr18 33823075 33823376 -52854172 - AluSg SINE Alu -7 303 3 1389 179 108 9 chr18 33823380 33823705 -52853843 - L1MD3 LINE L1 -12 7983 7627 728 134 0 39 chr18 33823810 33823937 -52853611 - FLAM_A SINE Alu 0 142 21 1034 235 5 0 chr18 33824088 33824305 -52853243 + MER58A DNA MER1_type 1 218 -6 439 259 175 42 chr18 33824367 33824556 -52852992 + MIR SINE MIR 37 250 -12 24 0 0 0 chr18 33826055 33826079 -52851469 + AT_rich Low_complexity Low_complexity 1 24 0 2499 66 0 0 chr18 33826350 33826654 -52850894 + AluY SINE Alu 1 304 -7 22 56 0 0 chr18 33827000 33827036 -52850512 + AT_rich Low_complexity Low_complexity 1 36 0 2422 88 3 0 chr18 33827742 33828050 -52849498 + AluSp SINE Alu 1 309 -4 2620 143 65 5 chr18 33828509 33828956 -52848592 + MER101 LTR ERV1 1 474 0 441 307 30 55 chr18 33829250 33829452 -52848096 + MIR3 SINE MIR 6 202 -6 1551 145 15 4 chr18 33829614 33829883 -52847665 + L1MA7 LINE L1 5780 6051 -240 426 158 0 0 chr18 33829885 33829961 -52847587 + L1MA7 LINE L1 6171 6246 -45 1839 167 14 10 chr18 33830753 33831047 -52846501 + AluJo SINE Alu 1 295 -17 226 221 0 26 chr18 33831047 33831124 -52846424 + GA-rich Low_complexity Low_complexity 1 75 0 2374 106 0 0 chr18 33831142 33831454 -52846094 + AluSx SINE Alu 1 312 0 914 211 16 0 chr18 33831551 33831736 -52845812 - MER58A DNA MER1_type 0 224 37 444 296 95 11 chr18 33831744 33831933 -52845615 - MIR SINE MIR -34 228 24 600 299 160 56 chr18 33832372 33832630 -52844918 + L2 LINE L2 724 954 -2360 2235 130 0 0 chr18 33832630 33832937 -52844611 - AluSx SINE Alu -5 307 1 600 299 160 56 chr18 33832937 33833217 -52844331 + L2 LINE L2 954 1318 -1996 961 220 137 12 chr18 33833220 33833475 -52844073 + L2 LINE L2 1880 2166 -1148 1136 172 19 5 chr18 33833493 33833702 -52843846 - MER20 DNA MER1_type -7 212 1 456 307 15 0 chr18 33833707 33833844 -52843704 + L2 LINE L2 2181 2319 -995 506 235 54 27 chr18 33833852 33834001 -52843547 + L2 LINE L2 3161 3313 0 2206 107 3 7 chr18 33834642 33834941 -52842607 - AluSx SINE Alu -14 298 1 2365 93 0 3 chr18 33836455 33836765 -52840783 + AluY SINE Alu 1 309 -2 25 31 0 0 chr18 33837871 33837903 -52839645 + AT_rich Low_complexity Low_complexity 1 32 0 4025 277 209 34 chr18 33838455 33841102 -52836446 - L2 LINE L2 -1 3312 205 21 36 0 0 chr18 33841206 33841234 -52836314 + AT_rich Low_complexity Low_complexity 1 28 0 490 258 114 6 chr18 33841469 33841636 -52835912 + MIR SINE MIR 37 221 -41 2430 88 0 0 chr18 33841705 33842012 -52835536 - AluSg SINE Alu -3 307 1 461 167 125 0 chr18 33842388 33842508 -52835040 - MER33 DNA MER1_type -1 323 189 283 156 11 11 chr18 33842535 33842625 -52834923 + (TA)n Simple_repeat Simple_repeat 1 90 0 670 176 6 43 chr18 33842638 33842822 -52834726 - MER33 DNA MER1_type -250 74 1 1679 179 28 10 chr18 33843583 33843873 -52833675 - AluJb SINE Alu -17 295 1 682 196 95 24 chr18 33843994 33844162 -52833386 - MER58A DNA MER1_type 0 224 45 2023 127 38 0 chr18 33844248 33844539 -52833009 + AluSx SINE Alu 1 302 -10 333 220 76 42 chr18 33846106 33846224 -52831324 + L2 LINE L2 3191 3312 -1 854 305 65 12 chr18 33846939 33847368 -52830180 - L1MC4a LINE L1 -1955 5853 5402 217 317 165 57 chr18 33848430 33848970 -52828578 + L2 LINE L2 2064 2661 -653 306 340 38 25 chr18 33849691 33849850 -52827698 + L2 LINE L2 3152 3312 -1 1727 157 61 0 chr18 33850570 33850850 -52826698 + AluSx SINE Alu 1 297 -15 210 367 0 10 chr18 33851010 33851108 -52826440 + GA-rich Low_complexity Low_complexity 5 101 0 2947 122 36 22 chr18 33851899 33852085 -52825463 + L1MC1 LINE L1 5826 6008 -325 2155 85 0 21 chr18 33852085 33852366 -52825182 - AluSg SINE Alu -18 292 18 2947 122 36 22 chr18 33852366 33852680 -52824868 + L1MC1 LINE L1 6008 6333 0 322 318 103 31 chr18 33852861 33853056 -52824492 + MIR SINE MIR 43 251 -11 548 263 110 47 chr18 33854887 33855123 -52822425 + MIR SINE MIR 12 262 0 257 258 0 0 chr18 33855819 33855881 -52821667 + L1P LINE L1 4912 4973 -1173 341 277 82 58 chr18 33856101 33856216 -52821332 + L1ME LINE L1 5324 5435 -735 1656 192 0 17 chr18 33856216 33856518 -52821030 + AluJo SINE Alu 2 298 -14 341 277 82 58 chr18 33856518 33856552 -52820996 + L1ME LINE L1 5435 5467 -703 2359 97 7 0 chr18 33856552 33856852 -52820696 + AluSg SINE Alu 1 302 -8 341 277 82 58 chr18 33856852 33857030 -52820518 + L1ME LINE L1 5467 5660 -510 3221 123 12 12 chr18 33857142 33857655 -52819893 + L1PA16 LINE L1 5652 6164 -2 186 327 138 25 chr18 33858682 33858841 -52818707 + MER5B DNA MER1_type 2 178 0 202 172 0 35 chr18 33860329 33860387 -52817161 + G-rich Low_complexity Low_complexity 6 61 0 297 258 0 0 chr18 33862368 33862434 -52815114 - MIR3 SINE MIR -4 204 139 327 305 38 42 chr18 33863102 33863273 -52814275 + MIR SINE MIR 18 189 -73 2562 56 0 0 chr18 33863273 33863575 -52813973 + AluY SINE Alu 1 302 -9 327 305 38 42 chr18 33863575 33863636 -52813912 + MIR SINE MIR 189 249 -13 240 252 58 58 chr18 33864006 33864109 -52813439 + MIR SINE MIR 158 260 -2 205 299 126 8 chr18 33865462 33865589 -52811959 + MIR3 SINE MIR 2 143 -65 1546 170 66 88 chr18 33865891 33866314 -52811234 + MLT2D LTR ERVL 1 414 0 223 362 79 18 chr18 33866726 33867005 -52810543 + L2 LINE L2 2253 2548 -766 333 283 57 128 chr18 33867309 33867606 -52809942 - L2 LINE L2 -49 3223 2948 213 280 80 20 chr18 33867880 33867980 -52809568 - MIR SINE MIR -145 117 12 5039 66 0 5 chr18 33868108 33868748 -52808800 - L1PA5 LINE L1 -5 6149 5513 375 340 74 55 chr18 33868757 33869190 -52808358 - L2 LINE L2 -556 2758 2318 530 280 91 16 chr18 33869200 33869386 -52808162 - MIR SINE MIR 0 262 63 1974 135 49 0 chr18 33870438 33870726 -52806822 - AluSx SINE Alu -10 302 1 548 104 0 0 chr18 33871904 33871981 -52805567 + AluSg SINE Alu 1 77 -232 1755 115 0 8 chr18 33872082 33872335 -52805213 + AluSg SINE Alu 57 307 -3 21 36 0 0 chr18 33873383 33873411 -52804137 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr18 33873548 33873585 -52803963 + AT_rich Low_complexity Low_complexity 1 37 0 691 188 15 0 chr18 33874466 33874599 -52802949 + FLAM_C SINE Alu 1 135 -8 2140 123 3 13 chr18 33875689 33875999 -52801549 + AluSx SINE Alu 1 307 -5 26 50 0 0 chr18 33876051 33876091 -52801457 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr18 33876848 33876879 -52800669 + AT_rich Low_complexity Low_complexity 1 31 0 262 284 15 0 chr18 33880484 33880551 -52796997 - L2 LINE L2 -9 3304 3237 181 81 27 27 chr18 33881090 33881127 -52796421 + (GGGAA)n Simple_repeat Simple_repeat 3 39 0 247 207 103 0 chr18 33881586 33881644 -52795904 + L2 LINE L2 3250 3313 0 203 317 166 14 chr18 33881864 33882009 -52795539 - MIR3 SINE MIR -10 198 32 536 309 68 18 chr18 33883825 33884045 -52793503 - MIR SINE MIR -4 258 28 910 148 0 0 chr18 33884442 33884577 -52792971 + AluJo SINE Alu 1 135 -177 295 276 41 31 chr18 33884686 33884784 -52792764 + L2 LINE L2 3136 3234 -38 689 175 0 29 chr18 33886085 33886222 -52791326 - MER45A DNA AcHobo 0 178 46 636 249 155 55 chr18 33886371 33886912 -52790636 - HAL1 LINE L1 -1 2506 1912 1245 185 58 21 chr18 33886931 33887174 -52790374 + AluJo SINE Alu 31 282 -30 282 73 0 0 chr18 33887180 33887221 -52790327 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 715 271 98 52 chr18 33887260 33887872 -52789676 - HAL1 LINE L1 -1248 1259 620 217 245 0 0 chr18 33891149 33891198 -52786350 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 332 246 127 0 chr18 33891198 33891277 -52786271 - L1MC4 LINE L1 -1337 6705 6607 2333 108 0 0 chr18 33891277 33891583 -52785965 - AluSx SINE Alu -6 306 1 332 246 127 0 chr18 33891583 33891613 -52785935 - L1MC4 LINE L1 -1435 6607 6582 223 322 0 0 chr18 33891647 33891706 -52785842 + (CA)n Simple_repeat Simple_repeat 2 60 0 478 95 14 0 chr18 33891796 33891870 -52785678 + L1PA10 LINE L1 6089 6163 -5 273 29 0 0 chr18 33892119 33892153 -52785395 + (CA)n Simple_repeat Simple_repeat 1 34 0 192 310 84 0 chr18 33892242 33892313 -52785235 - MIR SINE MIR -171 91 15 213 277 15 0 chr18 33893606 33893671 -52783877 + L2 LINE L2 3248 3313 0 2179 94 28 0 chr18 33897399 33897687 -52779861 + AluSc SINE Alu 1 296 -13 191 316 97 61 chr18 33898178 33898406 -52779142 - L2 LINE L2 -41 3231 2996 404 307 45 42 chr18 33898979 33899243 -52778305 - L2 LINE L2 -1231 2083 1819 21 36 0 0 chr18 33900372 33900400 -52777148 + AT_rich Low_complexity Low_complexity 1 28 0 566 159 0 9 chr18 33900611 33900718 -52776830 + MLT1A1 LTR MaLR 11 116 -249 21 0 0 0 chr18 33902310 33902331 -52775217 + AT_rich Low_complexity Low_complexity 1 21 0 352 305 132 9 chr18 33903582 33903795 -52773753 - L1M4 LINE L1 -1778 4368 4130 2337 93 7 0 chr18 33903806 33904158 -52773390 + AluSp SINE Alu 3 356 0 503 269 38 25 chr18 33904210 33904370 -52773178 - MIR SINE MIR -42 220 59 2290 92 0 3 chr18 33904819 33905112 -52772436 - AluSg SINE Alu -18 292 1 414 0 0 0 chr18 33905262 33905308 -52772240 + (TG)n Simple_repeat Simple_repeat 1 46 0 2112 135 7 0 chr18 33905467 33905770 -52771778 + AluSx SINE Alu 1 305 -7 212 307 105 18 chr18 33906260 33906374 -52771174 + MIR SINE MIR 17 140 -122 2110 108 3 42 chr18 33906662 33906969 -52770579 + AluSg SINE Alu 1 295 -15 2320 112 0 0 chr18 33907443 33907748 -52769800 + AluSx SINE Alu 1 305 -7 747 210 19 0 chr18 33907863 33908025 -52769523 - MER20 DNA MER1_type -2 217 53 21 36 0 0 chr18 33911294 33911322 -52766226 + AT_rich Low_complexity Low_complexity 1 28 0 255 176 42 63 chr18 33911856 33911998 -52765550 - L1MC5 LINE L1 -214 7747 7609 31 0 0 0 chr18 33912432 33912463 -52765085 + AT_rich Low_complexity Low_complexity 1 31 0 708 291 62 17 chr18 33912984 33913225 -52764323 + MIR SINE MIR 11 262 0 240 277 109 36 chr18 33914093 33914230 -52763318 - MIR SINE MIR -26 236 90 23 33 0 0 chr18 33914265 33914295 -52763253 + AT_rich Low_complexity Low_complexity 1 30 0 218 375 39 0 chr18 33915163 33915267 -52762281 - MER91C DNA MER1_type -2 138 31 2550 229 78 63 chr18 33915315 33916420 -52761128 + L1MC4 LINE L1 6889 8009 -33 775 311 59 0 chr18 33916590 33916828 -52760720 - MIR SINE MIR -7 255 4 1526 201 20 13 chr18 33917141 33917440 -52760108 + AluJo SINE Alu 1 301 -11 24 0 0 0 chr18 33917475 33917499 -52760049 + AT_rich Low_complexity Low_complexity 1 24 0 717 201 69 0 chr18 33918033 33918192 -52759356 + MER5B DNA MER1_type 5 174 -4 184 367 11 44 chr18 33918433 33918523 -52759025 - L2 LINE L2 -358 2955 2869 245 246 101 14 chr18 33919179 33919248 -52758300 - L2 LINE L2 0 3313 3239 253 239 14 14 chr18 33919506 33919577 -52757971 + L2 LINE L2 3236 3306 -7 22 0 0 0 chr18 33920430 33920452 -52757096 + AT_rich Low_complexity Low_complexity 1 22 0 543 330 54 8 chr18 33920567 33920806 -52756742 - MIR SINE MIR -1 261 12 1892 155 30 7 chr18 33921376 33921680 -52755868 + AluJb SINE Alu 1 311 -1 316 219 146 44 chr18 33922317 33922454 -52755094 - MIR SINE MIR -111 151 1 261 200 74 53 chr18 33922540 33922635 -52754913 - L2 LINE L2 -37 3276 3180 38298 48 3 4 chr18 33922899 33928518 -52749030 + L1PA5 LINE L1 540 6150 -4 194 346 103 0 chr18 33928768 33928875 -52748673 - L2 LINE L2 -558 2756 2639 209 279 244 0 chr18 33930098 33930184 -52747364 - L2 LINE L2 -4 3268 3162 2069 131 34 0 chr18 33930210 33930508 -52747040 - AluSx SINE Alu -4 308 1 932 201 0 0 chr18 33930876 33931040 -52746508 - AluJb SINE Alu -12 300 137 2226 114 3 0 chr18 33932490 33932798 -52744750 - AluSx SINE Alu -3 309 1 926 274 67 44 chr18 33932836 33933270 -52744278 + MLT1J1 LTR MaLR 3 446 0 975 109 7 0 chr18 33933492 33933629 -52743919 - FLAM_C SINE Alu -5 138 1 659 109 0 0 chr18 33934663 33934764 -52742784 + AluSp/q SINE Alu 213 313 0 688 211 0 7 chr18 33934764 33934916 -52742632 - L1M4 LINE L1 -1894 4252 4102 408 274 30 49 chr18 33934930 33935094 -52742454 + MLT1J LTR MaLR 206 366 -145 22 0 0 0 chr18 33935186 33935208 -52742340 + AT_rich Low_complexity Low_complexity 1 22 0 1484 151 16 12 chr18 33937663 33937914 -52739634 - AluJo SINE Alu -24 288 37 381 324 81 0 chr18 33937917 33938090 -52739458 + MIR SINE MIR 63 249 -13 2221 123 0 0 chr18 33938100 33938401 -52739147 - AluSx SINE Alu -9 303 3 287 375 0 0 chr18 33939704 33939872 -52737676 + (CCA)n Simple_repeat Simple_repeat 1 168 0 13525 146 18 8 chr18 33941761 33942703 -52734845 + L1MA2 LINE L1 2730 3661 -2643 243 0 0 0 chr18 33942703 33942730 -52734818 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 13525 146 18 8 chr18 33942730 33945322 -52732226 + L1MA2 LINE L1 3661 6304 0 1229 195 146 99 chr18 33946172 33946598 -52730950 - MLT1E3 LTR MaLR -1 653 155 1377 203 78 15 chr18 33946612 33946947 -52730601 + MLT1A1 LTR MaLR 10 365 0 285 165 17 50 chr18 33946952 33947077 -52730471 - MLT1E1 LTR MaLR -463 191 1 766 169 7 7 chr18 33947935 33948071 -52729477 + FLAM_C SINE Alu 6 141 -2 587 220 69 44 chr18 33948443 33948602 -52728946 + MIR SINE MIR 95 257 -5 199 352 0 0 chr18 33948768 33948839 -52728709 + L2 LINE L2 2710 2780 -534 2356 53 0 3 chr18 33949288 33949591 -52727957 - L1PA4 LINE L1 0 6155 5854 261 293 197 27 chr18 33950112 33950259 -52727289 - MIR3 SINE MIR -6 202 31 279 270 191 0 chr18 33950456 33950571 -52726977 + MIR SINE MIR 56 192 -70 208 283 75 0 chr18 33950999 33951052 -52726496 - L3 LINE CR1 -8 1569 1513 1636 187 0 7 chr18 33951152 33951430 -52726118 + AluJo SINE Alu 1 276 -36 25 0 0 0 chr18 33951986 33952011 -52725537 + AT_rich Low_complexity Low_complexity 1 25 0 559 321 75 23 chr18 33953039 33953304 -52724244 - L3b LINE CR1 -189 1394 1116 2159 119 0 3 chr18 33953307 33953619 -52723929 - AluY SINE Alu 0 311 1 432 264 14 29 chr18 33954615 33954755 -52722793 - MIR SINE MIR -98 164 27 2553 125 49 2 chr18 33955605 33956014 -52721534 + MSTA LTR MaLR 1 428 0 801 219 76 25 chr18 33957544 33957782 -52719766 + L1MC4a LINE L1 6219 6468 -1340 2274 224 56 41 chr18 33958451 33958644 -52718904 + L1MDa LINE L1 1387 1576 -4964 2227 110 0 0 chr18 33958644 33958945 -52718603 + AluSg SINE Alu 1 301 -9 2274 224 56 41 chr18 33958945 33959525 -52718023 + L1MDa LINE L1 1576 2171 -4369 5350 233 47 47 chr18 33959542 33961441 -52716107 + L1MB7 LINE L1 2967 4865 -1281 3659 211 84 63 chr18 33961436 33962747 -52714801 + L1MC4a LINE L1 6471 7808 0 * 344 288 237 10 chr18 33963110 33963308 -52714240 - MIR SINE MIR -18 244 2 282 293 213 17 chr18 33964146 33964320 -52713228 + MIR SINE MIR 39 246 -16 234 286 88 33 chr18 33965979 33966070 -52711478 + MIR SINE MIR 89 184 -78 555 280 45 6 chr18 33967430 33967587 -52709961 - MIR SINE MIR -21 241 79 1290 179 121 23 chr18 33967970 33968367 -52709181 + HsTC2 DNA Tc2 1289 1900 0 390 263 68 17 chr18 33968623 33968741 -52708807 + MIR SINE MIR 136 259 -3 22 0 0 0 chr18 33969394 33969416 -52708132 + AT_rich Low_complexity Low_complexity 1 22 0 4297 182 35 3 chr18 33970422 33971588 -52705960 + L1MB7 LINE L1 4975 6175 -9 199 337 12 12 chr18 33972196 33972279 -52705269 + L2 LINE L2 2976 3058 -214 270 0 0 0 chr18 33973518 33973548 -52704000 + (TG)n Simple_repeat Simple_repeat 2 31 0 229 217 100 0 chr18 33973640 33973700 -52703848 - MIR SINE MIR -62 200 135 228 196 0 20 chr18 33975932 33975983 -52701565 + (TA)n Simple_repeat Simple_repeat 1 50 0 307 294 78 8 chr18 33976356 33976537 -52701011 + MIR SINE MIR 17 262 0 1486 141 123 34 chr18 33976699 33976968 -52700580 + AluJb SINE Alu 1 293 -19 477 261 53 61 chr18 33978016 33978186 -52699362 + MLT1I LTR MaLR 49 218 -191 1541 182 11 14 chr18 33978186 33978466 -52699082 + AluJb SINE Alu 25 303 -9 477 261 53 61 chr18 33978466 33978540 -52699008 + MLT1I LTR MaLR 218 291 -118 220 367 102 25 chr18 33978721 33979083 -52698465 + L2 LINE L2 2368 2757 -557 215 370 60 52 chr18 33979684 33980033 -52697515 + L2 LINE L2 2917 3268 -4 214 250 0 0 chr18 33980208 33980256 -52697292 + (TG)n Simple_repeat Simple_repeat 2 49 0 2072 112 44 47 chr18 33980281 33980646 -52696902 - THE1B LTR MaLR 0 364 1 954 261 59 33 chr18 33980646 33981037 -52696511 - MLT1C LTR MaLR -18 449 49 401 235 25 0 chr18 33981194 33981275 -52696273 - L2 LINE L2 -48 3224 3142 561 221 98 0 chr18 33981553 33981716 -52695832 - MER104 DNA MER2_type 0 180 2 330 319 63 31 chr18 33983607 33983833 -52693715 + L1ME LINE L1 5362 5594 -527 189 0 0 0 chr18 33984501 33984522 -52693026 + (GA)n Simple_repeat Simple_repeat 1 21 0 * 306 0 0 0 chr18 33984521 33984555 -52692993 + (TG)n Simple_repeat Simple_repeat 2 35 0 538 62 0 73 chr18 33985045 33985141 -52692407 - L1PA3 LINE L1 0 6155 6067 22 0 0 0 chr18 33985446 33985468 -52692080 + AT_rich Low_complexity Low_complexity 1 22 0 416 287 115 29 chr18 33986027 33986271 -52691277 + L1ME4a LINE L1 5430 5694 -427 339 296 128 17 chr18 33986275 33986454 -52691094 + L1ME4a LINE L1 5718 5916 -205 289 218 23 105 chr18 33986539 33986672 -52690876 + MLT1J LTR MaLR 387 508 -3 180 0 0 0 chr18 33987410 33987430 -52690118 + (A)n Simple_repeat Simple_repeat 1 20 0 330 273 0 0 chr18 33988513 33988579 -52688969 - L2 LINE L2 -2 3311 3246 1892 171 3 0 chr18 33988709 33989007 -52688541 + AluJo SINE Alu 2 300 -12 2143 138 46 31 chr18 33989404 33990106 -52687442 - L1M2 LINE L1 -638 5662 4955 305 148 0 0 chr18 33990125 33990179 -52687369 + L1MA6 LINE L1 5620 5673 -627 1701 161 20 32 chr18 33990179 33990525 -52687023 + L1MA6 LINE L1 5957 6300 0 371 241 0 12 chr18 33990987 33991070 -52686478 + L2 LINE L2 3190 3271 -1 281 351 9 18 chr18 33991120 33991234 -52686314 - MIR SINE MIR -75 133 21 514 242 38 137 chr18 33991780 33992152 -52685396 + Charlie2 DNA MER1_type 1 335 -2527 239 189 0 19 chr18 33992158 33992211 -52685337 + Charlie2 DNA MER1_type 1882 1933 -929 1260 210 63 28 chr18 33992229 33992690 -52684858 + Charlie2 DNA MER1_type 2380 2856 -6 330 284 211 31 chr18 33993518 33993712 -52683836 + MIR SINE MIR 19 247 -15 21 0 0 0 chr18 33993745 33993766 -52683782 + AT_rich Low_complexity Low_complexity 1 21 0 470 271 138 29 chr18 33994156 33994539 -52683009 + L1ME4a LINE L1 5502 5926 -195 434 280 121 97 chr18 33996249 33997359 -52680189 + L1M2 LINE L1 247 1424 -5425 260 316 40 0 chr18 33997846 33997922 -52679626 - MIR SINE MIR -144 118 40 227 29 57 0 chr18 33998032 33998067 -52679481 + (TTTC)n Simple_repeat Simple_repeat 1 37 0 2370 50 0 27 chr18 33998496 33998797 -52678751 + AluSq SINE Alu 1 293 -20 679 257 128 0 chr18 33999568 33999755 -52677793 + MIR SINE MIR 31 241 -21 471 350 70 49 chr18 34000464 34000895 -52676653 + L2 LINE L2 2825 3264 -8 1790 149 4 4 chr18 34001022 34001303 -52676245 - AluJo SINE Alu -3 309 29 2160 103 3 3 chr18 34001348 34001639 -52675909 + AluSc SINE Alu 1 291 -18 212 279 216 18 chr18 34003265 34003362 -52674186 + L2 LINE L2 3164 3287 -26 363 23 0 0 chr18 34003362 34003406 -52674142 + (TG)n Simple_repeat Simple_repeat 2 45 0 212 279 216 18 chr18 34003406 34003419 -52674129 + L2 LINE L2 3287 3296 -17 2247 109 17 0 chr18 34003542 34003844 -52673704 + AluSx SINE Alu 1 307 -5 729 191 48 48 chr18 34004024 34004233 -52673315 + MER112 DNA MER1_type 39 247 -13 286 0 0 0 chr18 34004282 34004315 -52673233 - U2 snRNA snRNA -155 33 1 202 233 0 0 chr18 34004443 34004486 -52673062 + (TATATG)n Simple_repeat Simple_repeat 5 47 0 1042 262 88 25 chr18 34005463 34005989 -52671559 - L1ME4a LINE L1 -27 6094 5536 378 290 195 24 chr18 34006205 34006502 -52671046 - L2 LINE L2 -927 2387 2040 1984 228 61 8 chr18 34006719 34007210 -52670338 - LTR40a LTR ERVL -2 517 1 3547 120 23 4 chr18 34007344 34007861 -52669687 - MER1A DNA MER1_type 0 527 1 194 311 104 47 chr18 34007957 34008063 -52669485 + L2 LINE L2 3197 3308 -5 285 29 0 0 chr18 34008267 34008301 -52669247 + (T)n Simple_repeat Simple_repeat 1 34 0 291 251 105 55 chr18 34008325 34008544 -52669004 + L1ME LINE L1 5502 5731 -390 600 287 120 34 chr18 34010346 34010697 -52666851 - L1M4 LINE L1 -2938 3208 2889 2720 135 11 23 chr18 34010697 34011135 -52666413 - Tigger2a DNA MER2_type -1 433 1 600 287 120 34 chr18 34011135 34011703 -52665845 - L1M4 LINE L1 -3257 2889 2210 182 343 104 0 chr18 34012108 34012175 -52665373 + L2 LINE L2 3144 3217 -55 288 265 162 0 chr18 34012440 34012557 -52664991 + L2 LINE L2 3137 3272 0 426 368 26 0 chr18 34012894 34013087 -52664461 - MIR SINE MIR -8 254 57 2006 129 17 0 chr18 34013162 34013457 -52664091 - AluSx SINE Alu -12 300 1 388 325 106 12 chr18 34013852 34014012 -52663536 + MIR SINE MIR 29 203 -59 1502 177 44 33 chr18 34014876 34015147 -52662401 - AluJb SINE Alu -21 291 18 2820 229 73 48 chr18 34016037 34016429 -52661119 + L1MC5 LINE L1 6499 6880 -1081 2098 128 3 19 chr18 34016429 34016741 -52660807 + AluSx SINE Alu 1 307 -5 2820 229 73 48 chr18 34016741 34017701 -52659847 + L1MC5 LINE L1 6880 7907 -54 2109 120 17 0 chr18 34018037 34018328 -52659220 - AluSx SINE Alu -16 296 1 25 31 0 0 chr18 34018337 34018369 -52659179 + AT_rich Low_complexity Low_complexity 1 32 0 501 288 203 32 chr18 34018487 34019362 -52658186 - HAL1 LINE L1 -559 1948 924 232 331 22 44 chr18 34019428 34019609 -52657939 - HAL1 LINE L1 -1674 833 657 563 323 70 58 chr18 34019679 34020193 -52657355 + LTR33 LTR ERVL 1 520 -1 1204 120 11 0 chr18 34021068 34021251 -52656297 - L1PB1 LINE L1 -8 6859 6675 351 75 0 60 chr18 34021251 34021316 -52656232 - L1PA7 LINE L1 -1 6153 6091 14229 175 35 18 chr18 34021316 34024401 -52653147 - L1PB1 LINE L1 -179 6688 3657 2168 119 0 7 chr18 34024401 34024704 -52652844 - AluSq SINE Alu -12 301 1 14229 175 35 18 chr18 34024704 34025947 -52651601 - L1PB1 LINE L1 -3210 3657 2436 2340 88 0 7 chr18 34025947 34026243 -52651305 + AluSp SINE Alu 3 296 -17 14229 175 35 18 chr18 34026243 34028331 -52649217 - L1PB1 LINE L1 -4431 2436 6 256 286 0 67 chr18 34028565 34028670 -52648878 - LTR16A LTR ERVL -1 449 352 1036 320 83 27 chr18 34028681 34029298 -52648250 + ERVL LTR ERVL 2839 3464 -2190 1727 195 9 20 chr18 34029298 34029641 -52647907 - MER58B DNA MER1_type -2 339 1 1036 320 83 27 chr18 34029641 34029749 -52647799 + ERVL LTR ERVL 3464 3565 -2089 752 276 92 46 chr18 34029865 34030260 -52647288 + ERVL LTR ERVL 3758 4164 -1321 588 321 36 27 chr18 34030593 34030926 -52646622 - ERVL LTR ERVL -650 4835 4500 246 238 0 0 chr18 34031261 34031345 -52646203 - L1MC4 LINE L1 -1345 6697 6614 192 97 0 0 chr18 34031345 34031376 -52646172 + (TA)n Simple_repeat Simple_repeat 2 32 0 412 231 0 22 chr18 34031429 34031520 -52646028 - L1MC4 LINE L1 -1339 6703 6615 429 292 48 41 chr18 34031567 34031858 -52645690 - ERVL LTR ERVL -1402 4083 3801 1522 362 33 22 chr18 34031991 34033035 -52644513 - ERVL LTR ERVL -2100 3664 2610 1770 261 45 40 chr18 34033351 34033998 -52643550 - MER76 LTR ERV -38 650 1 400 267 71 81 chr18 34033998 34034320 -52643228 + ERVL LTR ERVL 5025 5343 -421 288 0 0 0 chr18 34034416 34034448 -52643100 + (CA)n Simple_repeat Simple_repeat 2 33 0 261 0 0 0 chr18 34034481 34034510 -52643038 + (CA)n Simple_repeat Simple_repeat 1 29 0 842 325 68 15 chr18 34034765 34035221 -52642327 + LTR33 LTR ERVL 1 480 -41 21 0 0 0 chr18 34035818 34035839 -52641709 + AT_rich Low_complexity Low_complexity 1 21 0 628 279 120 0 chr18 34037186 34037469 -52640079 + LTR33 LTR ERVL 205 521 0 892 160 0 0 chr18 34037597 34037728 -52639820 + AluSx SINE Alu 1 131 -182 200 33 0 33 chr18 34037912 34037942 -52639606 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 952 182 6 0 chr18 34040462 34040621 -52636927 + AluSx SINE Alu 137 296 -16 24 96 0 0 chr18 34040703 34040776 -52636772 + AT_rich Low_complexity Low_complexity 1 73 0 366 291 125 0 chr18 34040788 34040932 -52636616 - MIR SINE MIR -57 151 40 2030 123 85 15 chr18 34041543 34041883 -52635665 + THE1B LTR MaLR 1 364 0 1684 193 33 0 chr18 34041926 34042201 -52635347 - AluJo SINE Alu -28 284 1 1593 163 78 59 chr18 34042409 34042796 -52634752 - MER83 LTR ERV1 0 448 55 701 106 0 26 chr18 34042799 34042912 -52634636 - MER83 LTR ERV1 -338 110 1 289 295 67 19 chr18 34042912 34043017 -52634531 - L2 LINE L2 -17 3296 3187 461 322 86 6 chr18 34043181 34043355 -52634193 - MIR SINE MIR -54 208 21 1718 158 28 31 chr18 34043412 34043703 -52633845 + AluJb SINE Alu 14 303 -9 220 317 67 17 chr18 34043773 34043893 -52633655 - L3 LINE CR1 -238 1339 1214 23 33 0 0 chr18 34044830 34044860 -52632688 + AT_rich Low_complexity Low_complexity 1 30 0 570 195 24 55 chr18 34046178 34046342 -52631206 + MIR SINE MIR 104 262 0 2176 107 0 0 chr18 34047227 34047508 -52630040 + AluSg SINE Alu 1 281 -29 1496 186 8 8 chr18 34047508 34047771 -52629777 + AluJo SINE Alu 34 296 -16 2560 143 8 44 chr18 34047779 34048204 -52629344 - L1MC3 LINE L1 -761 7024 6618 2269 133 22 48 chr18 34048204 34048604 -52628944 - MLT1B LTR MaLR 0 390 1 2560 143 8 44 chr18 34048604 34048682 -52628866 - L1MC3 LINE L1 -1167 6618 6539 2036 119 14 0 chr18 34048761 34049039 -52628509 + AluSx SINE Alu 20 301 -11 954 219 57 103 chr18 34049040 34049478 -52628070 - L1MD2 LINE L1 -13 6229 5812 1499 154 113 8 chr18 34049524 34049790 -52627758 - AluJo SINE Alu -18 294 1 218 284 95 34 chr18 34050230 34050378 -52627170 - L2 LINE L2 -2 3311 3155 279 172 35 0 chr18 34050385 34050443 -52627105 - Charlie1 DNA MER1_type -1 2760 2701 221 106 0 21 chr18 34050544 34050591 -52626957 + (TA)n Simple_repeat Simple_repeat 1 46 0 508 243 199 11 chr18 34050619 34050800 -52626748 - Charlie1 DNA MER1_type -2546 215 1 634 203 85 11 chr18 34051097 34051274 -52626274 + L1MD2 LINE L1 5644 5833 -526 25 31 0 0 chr18 34051767 34051799 -52625749 + AT_rich Low_complexity Low_complexity 1 32 0 277 208 0 0 chr18 34052137 34052185 -52625363 + L2 LINE L2 3265 3312 -1 220 339 122 9 chr18 34052225 34052340 -52625208 - L2 LINE L2 -5 3267 3140 256 323 10 0 chr18 34053517 34053616 -52623932 - L2 LINE L2 -2483 831 732 524 165 8 75 chr18 34053794 34053927 -52623621 - MER20 DNA MER1_type -29 190 67 2432 89 0 0 chr18 34054057 34054361 -52623187 - AluSc SINE Alu -5 304 1 2054 124 0 3 chr18 34054366 34054656 -52622892 - AluSx SINE Alu -23 289 1 225 197 61 0 chr18 34055931 34055997 -52621551 - L1ME LINE L1 -186 5935 5866 797 194 32 16 chr18 34057281 34057467 -52620081 + MER5A DNA MER1_type 1 189 0 786 231 142 34 chr18 34058358 34058683 -52618865 + MLT1A1 LTR MaLR 1 419 -7 465 291 53 91 chr18 34058725 34059010 -52618538 + L2 LINE L2 3039 3312 -1 213 39 0 0 chr18 34059029 34059055 -52618493 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 587 137 0 11 chr18 34059208 34059303 -52618245 + MER5A DNA MER1_type 96 189 0 1825 85 61 37 chr18 34059434 34059832 -52617716 - LTR7 LTR ERV1 0 450 1 1573 200 162 42 chr18 34059866 34060060 -52617488 - MLT1D LTR MaLR 0 505 336 2163 101 7 0 chr18 34060060 34060348 -52617200 - AluSx SINE Alu -22 290 1 1573 200 162 42 chr18 34060348 34060604 -52616944 - MLT1D LTR MaLR -169 336 1 243 331 69 8 chr18 34061143 34061273 -52616275 + MIR SINE MIR 119 256 -6 245 241 17 0 chr18 34061614 34061672 -52615876 + L2 LINE L2 3214 3272 0 453 323 51 91 chr18 34061679 34062010 -52615538 + L2 LINE L2 2954 3271 -1 676 130 0 0 chr18 34062391 34062499 -52615049 - AluSg/x SINE Alu -1 309 202 1647 168 7 3 chr18 34062519 34062804 -52614744 + AluJb SINE Alu 5 290 -22 185 0 40 0 chr18 34062818 34062843 -52614705 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 184 346 79 0 chr18 34063201 34063302 -52614246 + L2 LINE L2 1873 1981 -1333 387 341 93 42 chr18 34063359 34064037 -52613511 - L2 LINE L2 -5 3267 2563 1601 173 6 76 chr18 34064095 34064424 -52613124 + AluJo SINE Alu 1 306 -6 392 283 207 14 chr18 34064671 34064816 -52612732 - MER5A DNA MER1_type 0 189 17 355 221 0 15 chr18 34064846 34064914 -52612634 + L2 LINE L2 3203 3269 -3 2017 130 40 0 chr18 34065595 34065894 -52611654 + AluSq SINE Alu 1 311 -2 2504 74 0 3 chr18 34069019 34069330 -52608218 - AluY SINE Alu -1 310 1 504 296 81 12 chr18 34069470 34069642 -52607906 + MIR SINE MIR 28 211 -51 470 236 173 32 chr18 34069649 34069869 -52607679 + MIR SINE MIR 6 256 -6 285 219 109 84 chr18 34069908 34070027 -52607521 + MIR SINE MIR 20 141 -121 1022 81 0 0 chr18 34071107 34071231 -52606317 + AluSq/x SINE Alu 1 124 -189 1482 181 4 11 chr18 34071937 34072197 -52605351 - AluJb SINE Alu -23 289 32 429 299 129 11 chr18 34072483 34072761 -52604787 - L1MC/D LINE L1 -1992 5816 5506 2487 61 0 0 chr18 34073220 34073517 -52604031 - AluY SINE Alu -14 297 1 272 309 73 45 chr18 34073637 34073815 -52603733 + L2 LINE L2 3122 3304 -9 27 0 0 0 chr18 34073892 34073919 -52603629 + AT_rich Low_complexity Low_complexity 1 27 0 1920 187 65 0 chr18 34073922 34074381 -52603167 - Charlie1 DNA MER1_type -130 2631 2143 395 277 0 0 chr18 34074396 34074497 -52603051 - MER65B LTR ERV1 -390 141 41 1476 156 24 24 chr18 34074498 34074801 -52602747 - L1MC3 LINE L1 -3 7782 6027 571 324 78 5 chr18 34075828 34076047 -52601501 - MIR SINE MIR -8 254 20 185 320 180 10 chr18 34076312 34076412 -52601136 - L2 LINE L2 0 3313 3197 180 364 195 23 chr18 34076514 34076678 -52600870 + L2 LINE L2 2025 2160 -1154 1875 104 15 92 chr18 34076678 34077005 -52600543 - AluSx SINE Alu -10 302 1 180 364 195 23 chr18 34077005 34077441 -52600107 + L2 LINE L2 2160 2728 -586 841 270 19 42 chr18 34077469 34077728 -52599820 + MIR SINE MIR 5 257 -5 398 334 109 67 chr18 34077784 34078215 -52599333 + L2 LINE L2 2812 3260 -12 2367 93 3 3 chr18 34078219 34078531 -52599017 - AluSx SINE Alu 0 312 1 552 310 58 0 chr18 34078543 34078717 -52598831 - MIR3 SINE MIR -10 198 15 308 358 77 39 chr18 34078900 34079160 -52598388 + L2 LINE L2 2007 2276 -1038 303 286 57 9 chr18 34079160 34079265 -52598283 - MER91C DNA MER1_type 0 140 31 726 292 78 63 chr18 34079532 34080123 -52597425 + L2 LINE L2 2472 3084 -188 22 0 0 0 chr18 34081381 34081403 -52596145 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr18 34081622 34081648 -52595900 + (TC)n Simple_repeat Simple_repeat 2 27 0 2634 23 0 3 chr18 34082104 34082408 -52595140 - AluY SINE Alu -7 304 2 734 66 175 7 chr18 34082484 34082621 -52594927 + MSTA LTR MaLR 1 160 -268 2639 39 0 0 chr18 34082789 34083094 -52594454 - AluY SINE Alu -5 306 2 1703 125 140 15 chr18 34083170 34083513 -52594035 + MSTA LTR MaLR 1 386 -42 354 338 52 45 chr18 34084265 34084552 -52592996 + L2 LINE L2 2342 2630 -684 2184 247 77 87 chr18 34084619 34085930 -52591618 - Charlie2b DNA MER1_type -546 2316 1020 2273 106 0 0 chr18 34085930 34086223 -52591325 - AluSq SINE Alu -20 293 1 2184 247 77 87 chr18 34086223 34086420 -52591128 - Charlie2b DNA MER1_type -1842 1020 823 700 299 30 36 chr18 34086420 34086755 -52590793 - LTR16C LTR ERVL -3 488 156 717 225 65 78 chr18 34086937 34087244 -52590304 - Charlie2b DNA MER1_type -2003 779 477 617 242 81 70 chr18 34087255 34087553 -52589995 - Charlie2b DNA MER1_type -2438 344 44 1831 164 18 0 chr18 34087604 34087890 -52589658 - AluJo SINE Alu -21 291 1 612 145 0 0 chr18 34088053 34088170 -52589378 + (TCCC)n Simple_repeat Simple_repeat 2 118 0 1412 193 62 0 chr18 34088171 34088430 -52589118 - AluJo SINE Alu -37 275 1 181 146 49 24 chr18 34089939 34089980 -52587568 - MIR SINE MIR -218 44 3 273 313 53 40 chr18 34090103 34090253 -52587295 - MIR SINE MIR -7 255 104 1559 215 0 7 chr18 34090279 34090567 -52586981 - AluJo SINE Alu -26 286 1 214 264 83 0 chr18 34090680 34090752 -52586796 + L2 LINE L2 2313 2390 -924 252 338 14 50 chr18 34090917 34091056 -52586492 + L2 LINE L2 2611 2744 -570 839 10 0 0 chr18 34091159 34091257 -52586291 - L1PA2 LINE L1 0 6155 6058 192 346 16 63 chr18 34091348 34091475 -52586073 + L2 LINE L2 2951 3071 -201 2058 101 44 17 chr18 34091551 34091847 -52585701 + AluSg SINE Alu 1 304 -6 424 192 0 0 chr18 34092003 34092081 -52585467 - MSTC LTR MaLR -350 78 1 1570 168 72 20 chr18 34092445 34092737 -52584811 + AluJo SINE Alu 1 307 -5 533 307 123 51 chr18 34093089 34093198 -52584350 - L1MC/D LINE L1 -346 5775 5675 2669 174 51 6 chr18 34093198 34093670 -52583878 - LTR42 LTR ERVL -2 493 1 533 307 123 51 chr18 34093670 34094246 -52583302 - L1MC/D LINE L1 -446 5675 5040 1396 186 128 3 chr18 34094252 34094564 -52582984 - MSTD LTR MaLR 0 396 46 1085 195 114 62 chr18 34094565 34094986 -52582562 + LTR7 LTR ERV1 1 443 -7 290 104 21 0 chr18 34094993 34095041 -52582507 - MSTD LTR MaLR -347 49 1 909 254 99 102 chr18 34095064 34095591 -52581957 - MER77 LTR ERV1 -4 601 141 357 238 16 66 chr18 34095639 34095761 -52581787 - MER77 LTR ERV1 -436 169 54 1591 219 127 56 chr18 34095923 34096579 -52580969 + MER50 LTR ERV1 14 715 -19 238 280 97 45 chr18 34096678 34097306 -52580242 - L1MC/D LINE L1 -1300 4846 4186 413 348 11 11 chr18 34097341 34097522 -52580026 - L1MC/D LINE L1 -2025 4121 3941 3232 161 10 4 chr18 34097529 34098609 -52578939 + L1P5 LINE L1 4681 5766 -385 298 326 58 0 chr18 34099424 34099562 -52577986 + MIR SINE MIR 29 174 -88 2564 106 17 6 chr18 34099612 34099972 -52577576 + THE1B LTR MaLR 1 364 0 429 166 0 173 chr18 34100159 34100298 -52577250 + MIR3 SINE MIR 76 190 -18 431 321 49 0 chr18 34100341 34100503 -52577045 + L3b LINE CR1 1258 1427 -156 2310 89 7 3 chr18 34101090 34101394 -52576154 + AluSq SINE Alu 1 305 -8 451 369 10 100 chr18 34103493 34103783 -52573765 - L2 LINE L2 -22 3250 2987 5107 166 33 32 chr18 34103917 34104985 -52572563 + MER11C LTR ERVK 3 1071 0 22 56 0 0 chr18 34105033 34105069 -52572479 + AT_rich Low_complexity Low_complexity 1 36 0 707 194 0 8 chr18 34105466 34105590 -52571958 - FLAM_A SINE Alu -10 123 1 196 292 56 0 chr18 34105593 34105665 -52571883 + L2 LINE L2 2911 2986 -286 380 319 43 25 chr18 34105842 34106005 -52571543 - MIR3 SINE MIR -5 203 38 887 268 98 12 chr18 34106012 34106475 -52571073 + MLT1K LTR MaLR 55 588 0 21 36 0 0 chr18 34106498 34106526 -52571022 + AT_rich Low_complexity Low_complexity 1 28 0 1035 167 0 12 chr18 34106698 34106866 -52570682 - AluJb SINE Alu -3 309 144 199 304 0 0 chr18 34106923 34106969 -52570579 + L2 LINE L2 3144 3189 -83 376 220 186 17 chr18 34107009 34107127 -52570421 - MIR SINE MIR -1 261 124 264 329 32 44 chr18 34109293 34109451 -52568097 + MIR SINE MIR 57 212 -50 2848 204 22 19 chr18 34109741 34110132 -52567416 + MER82 DNA MER2_type 1 396 -257 297 0 0 0 chr18 34110132 34110165 -52567383 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 2848 204 22 19 chr18 34110165 34110394 -52567154 + MER82 DNA MER2_type 396 623 -30 272 357 39 26 chr18 34110419 34110573 -52566975 + L3 LINE CR1 1311 1466 -111 1015 23 30 0 chr18 34111604 34111736 -52565812 + (TCTA)n Simple_repeat Simple_repeat 3 138 0 2336 73 0 3 chr18 34111736 34112015 -52565533 - AluY SINE Alu -31 280 1 1535 171 63 57 chr18 34112017 34112385 -52565163 - L1MB3 LINE L1 -42 6141 5768 2276 108 6 10 chr18 34112385 34112699 -52564849 + AluSq SINE Alu 1 313 0 1535 171 63 57 chr18 34112699 34112803 -52564745 - L1MB3 LINE L1 -415 5768 5666 1426 249 67 15 chr18 34112814 34113337 -52564211 - L1MC4 LINE L1 -544 7498 6949 1508 162 49 15 chr18 34113496 34113792 -52563756 - AluJb SINE Alu 0 311 7 6409 203 84 23 chr18 34114004 34115735 -52561813 + L1MDa LINE L1 256 2091 -4449 231 139 0 0 chr18 34115731 34115774 -52561774 + L1MDa LINE L1 3126 3168 -3372 * 342 323 30 36 chr18 34115855 34116158 -52561390 - L1MC4a LINE L1 -1231 6577 6277 536 234 61 15 chr18 34116190 34116387 -52561161 - L1MC4a LINE L1 -1773 6035 5830 214 147 0 0 chr18 34117574 34117608 -52559940 + (TG)n Simple_repeat Simple_repeat 1 34 0 283 186 17 160 chr18 34117684 34117818 -52559730 - MIR SINE MIR -48 160 44 2414 71 0 0 chr18 34118568 34118865 -52558683 - AluY SINE Alu -14 297 1 469 360 74 63 chr18 34118911 34119289 -52558259 - L2 LINE L2 0 3272 2891 592 227 8 0 chr18 34119455 34119587 -52557961 + MER69 DNA AcHobo 12 144 -1082 251 246 0 0 chr18 34119601 34119662 -52557886 + MER69 DNA AcHobo 2466 2526 0 299 291 132 23 chr18 34119683 34119941 -52557607 - L2 LINE L2 -631 2683 2398 257 312 55 0 chr18 34119994 34120103 -52557445 - L2 LINE L2 -1315 1999 1885 802 287 49 43 chr18 34121421 34121766 -52555782 - L3 LINE CR1 -667 910 564 267 295 19 19 chr18 34121948 34122053 -52555495 - L3 LINE CR1 -1005 572 468 1192 194 50 14 chr18 34122149 34122427 -52555121 + LTR40b LTR ERVL 156 443 -19 12015 138 26 17 chr18 34122434 34124535 -52553013 + L1PBa LINE L1 2 2122 -4741 1942 96 3 0 chr18 34124529 34124811 -52552737 + L1PB1 LINE L1 5508 5790 -361 * 328 190 10 10 chr18 34124821 34124921 -52552627 + (TA)n Simple_repeat Simple_repeat 2 101 0 2554 93 19 0 chr18 34124926 34125290 -52552258 + L1PB1 LINE L1 5776 6146 -5 5949 132 13 18 chr18 34125387 34125565 -52551983 - L1MA3 LINE L1 -8 7716 7539 2164 107 0 3 chr18 34125565 34125856 -52551692 + AluY SINE Alu 5 294 -17 5949 132 13 18 chr18 34125856 34126726 -52550822 - L1MA3 LINE L1 -185 7539 6673 5405 209 86 37 chr18 34126839 34128093 -52549455 - L1MDa LINE L1 -4923 1617 425 2091 138 13 10 chr18 34128093 34128398 -52549150 - AluSx SINE Alu -6 306 1 5405 209 86 37 chr18 34128398 34128471 -52549077 - L1MDa LINE L1 -6115 425 357 832 221 0 17 chr18 34128471 34128643 -52548905 + FAM SINE Alu 1 169 -6 5405 209 86 37 chr18 34128643 34128842 -52548706 - L1MDa LINE L1 -6183 357 16 514 249 105 24 chr18 34128906 34129115 -52548433 + L1MC4 LINE L1 6727 6952 -1090 1521 158 49 15 chr18 34129238 34129534 -52548014 + AluJb SINE Alu 7 311 0 1484 247 65 13 chr18 34129693 34130216 -52547332 + L1MC4 LINE L1 6949 7498 -544 1065 203 66 56 chr18 34130227 34130332 -52547216 + L1MB3 LINE L1 5666 5768 -415 2319 99 6 10 chr18 34130332 34130646 -52546902 - AluSq SINE Alu 0 313 1 1065 203 66 56 chr18 34130646 34130935 -52546613 + L1MB3 LINE L1 5768 6064 -119 1331 135 5 29 chr18 34131035 34131243 -52546305 - AluSp SINE Alu -110 203 1 12831 157 17 43 chr18 34131246 34132023 -52545525 - L1MA3 LINE L1 -1193 6372 5576 2104 117 3 0 chr18 34132023 34132343 -52545205 - AluSp SINE Alu 0 321 1 12831 157 17 43 chr18 34132343 34134688 -52542860 - L1MA3 LINE L1 -1989 5576 3331 21 0 0 0 chr18 34134688 34134709 -52542839 + AT_rich Low_complexity Low_complexity 1 21 0 1991 4 0 0 chr18 34134711 34134945 -52542603 - L1HS LINE L1 -3 6152 5919 4748 162 38 17 chr18 34134976 34135869 -52541679 - L1MA3 LINE L1 -6642 923 12 443 216 72 32 chr18 34136964 34137089 -52540459 - MER5A DNA MER1_type 0 189 60 353 195 85 0 chr18 34137850 34137932 -52539616 + MER117 DNA MER1_type 51 139 -58 209 207 69 17 chr18 34138084 34138142 -52539406 + MIR SINE MIR 118 178 -84 432 249 264 15 chr18 34138216 34138419 -52539129 + MIR SINE MIR 3 260 -2 274 238 149 30 chr18 34138464 34138632 -52538916 + L3 LINE CR1 1254 1441 -136 24 32 0 0 chr18 34138639 34138670 -52538878 + AT_rich Low_complexity Low_complexity 1 31 0 1718 34 0 0 chr18 34138670 34138875 -52538673 - L1PA4 LINE L1 -3 6152 5948 2744 29 0 0 chr18 34138904 34139214 -52538334 + AluYa5 SINE Alu 1 310 -1 22 0 0 0 chr18 34140747 34140769 -52536779 + AT_rich Low_complexity Low_complexity 1 22 0 4375 126 34 9 chr18 34140771 34141069 -52536479 - L1PA16 LINE L1 -5 6161 5872 1713 112 0 4 chr18 34141069 34141302 -52536246 - AluSc SINE Alu -18 291 60 4375 126 34 9 chr18 34141302 34141736 -52535812 - L1PA16 LINE L1 -294 5872 5411 185 342 63 0 chr18 34142253 34142332 -52535216 + L2 LINE L2 3151 3234 -38 1201 218 25 50 chr18 34142586 34142944 -52534604 + MLT2C1 LTR ERVL 1 349 -48 344 145 0 13 chr18 34142944 34143020 -52534528 - L1MB8 LINE L1 -11 6167 6093 2890 163 44 5 chr18 34143040 34143591 -52533957 - L1MB4 LINE L1 -6 6174 5603 253 203 17 0 chr18 34143596 34143655 -52533893 + MLT2F LTR ERVL 604 663 0 22 0 0 0 chr18 34143753 34143775 -52533773 + AT_rich Low_complexity Low_complexity 1 22 0 1252 160 10 19 chr18 34143777 34143983 -52533565 - AluJo SINE Alu -23 289 86 21 0 0 0 chr18 34143983 34144004 -52533544 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr18 34144310 34144341 -52533207 + AT_rich Low_complexity Low_complexity 1 31 0 2439 90 3 12 chr18 34144341 34144684 -52532864 - L1PA8A LINE L1 0 6131 5792 366 257 66 44 chr18 34144829 34144965 -52532583 - L1MEd LINE L1 -5123 996 858 438 163 50 0 chr18 34145092 34145172 -52532376 - MIR SINE MIR 0 262 179 2007 214 82 14 chr18 34145173 34145688 -52531860 + MER77 LTR ERV1 52 601 -4 319 277 24 0 chr18 34145693 34145776 -52531772 - MIR SINE MIR -78 184 100 610 293 108 49 chr18 34145851 34146414 -52531134 - L2 LINE L2 -854 2460 1814 484 288 93 37 chr18 34146737 34146846 -52530702 + MIR SINE MIR 23 124 -138 1963 174 45 3 chr18 34146846 34147220 -52530328 - MLT1B LTR MaLR 0 390 1 484 288 93 37 chr18 34147220 34147325 -52530223 + MIR SINE MIR 124 249 -13 569 151 0 0 chr18 34149231 34149317 -52528231 + FRAM/FAM SINE Alu 1 85 -91 501 294 35 6 chr18 34149920 34150090 -52527458 + MER5A DNA MER1_type 9 183 -6 2714 86 3 24 chr18 34150185 34150568 -52526980 + THE1C LTR MaLR 1 375 0 2423 89 0 0 chr18 34151177 34151479 -52526069 + AluY SINE Alu 1 302 -9 340 288 0 0 chr18 34152477 34152557 -52524991 + MER81 DNA DNA 1 80 -34 347 316 20 46 chr18 34152887 34152901 -52524647 + MIR SINE MIR 3 16 -192 747 207 73 17 chr18 34152901 34153080 -52524468 + MER5A DNA MER1_type 1 189 0 347 316 20 46 chr18 34153080 34153217 -52524331 + MIR SINE MIR 16 147 -61 313 329 86 65 chr18 34154654 34154946 -52522602 + L2 LINE L2 2882 3179 -93 234 0 0 0 chr18 34156323 34156349 -52521199 + (T)n Simple_repeat Simple_repeat 1 26 0 190 214 71 0 chr18 34157008 34157050 -52520498 - L2 LINE L2 -18 3295 3251 324 240 10 20 chr18 34157232 34157332 -52520216 + L1MC5 LINE L1 7815 7913 -48 1048 172 88 23 chr18 34158033 34158295 -52519253 - L1MA9 LINE L1 0 6312 6034 967 178 10 29 chr18 34158457 34158665 -52518883 + MER3 DNA MER1_type 6 209 0 318 333 10 10 chr18 34158927 34159029 -52518519 + L2 LINE L2 2593 2694 -620 3379 110 86 29 chr18 34159033 34159281 -52518267 + LTR18B LTR ERVL 1 233 -381 252 0 0 0 chr18 34159281 34159309 -52518239 + (GA)n Simple_repeat Simple_repeat 2 29 0 3379 110 86 29 chr18 34159309 34159384 -52518164 + LTR18B LTR ERVL 233 302 -312 2531 54 0 0 chr18 34159384 34159681 -52517867 + AluY SINE Alu 1 297 -14 3379 110 86 29 chr18 34159681 34159937 -52517611 + LTR18B LTR ERVL 302 614 0 571 338 134 16 chr18 34159995 34160315 -52517233 + L2 LINE L2 2952 3309 -4 493 252 9 0 chr18 34160869 34160984 -52516564 + MER5A DNA MER1_type 7 122 -67 2774 207 13 22 chr18 34161278 34161834 -52515714 - MLT2B3 LTR ERVL 0 554 4 505 319 79 14 chr18 34161885 34162101 -52515447 - MIR SINE MIR -4 258 29 277 234 31 0 chr18 34162644 34162708 -52514840 - MIR SINE MIR -113 149 84 21 57 0 0 chr18 34163503 34163538 -52514010 + AT_rich Low_complexity Low_complexity 1 35 0 435 315 31 16 chr18 34164205 34164332 -52513216 - L2 LINE L2 -4 3268 3140 250 319 43 36 chr18 34164370 34164508 -52513040 - MIR SINE MIR 0 262 124 263 200 0 0 chr18 34164865 34164915 -52512633 + MLT1I LTR MaLR 93 142 -267 316 202 0 67 chr18 34165112 34165201 -52512347 + MLT1I LTR MaLR 318 400 -9 202 288 17 0 chr18 34166324 34166383 -52511165 + CT-rich Low_complexity Low_complexity 4 63 0 275 200 0 27 chr18 34167251 34167326 -52510222 + (CATATA)n Simple_repeat Simple_repeat 1 73 0 2277 110 48 25 chr18 34167427 34167783 -52509765 + THE1B LTR MaLR 1 364 0 3605 19 0 0 chr18 34168008 34168421 -52509127 - L1PA3 LINE L1 -118 6037 5625 1023 40 0 0 chr18 34168421 34168545 -52509003 + L1PA3 LINE L1 6031 6155 0 216 0 0 0 chr18 34169109 34169133 -52508415 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 35 0 0 chr18 34169387 34169416 -52508132 + AT_rich Low_complexity Low_complexity 1 29 0 4548 196 48 9 chr18 34169550 34171009 -52506539 - L1MD1 LINE L1 0 6636 5118 248 35 0 0 chr18 34171010 34171039 -52506509 - L1P2 LINE L1 -576 5579 5551 2748 10 0 0 chr18 34171039 34171348 -52506200 + L1PA3 LINE L1 5845 6153 -2 4880 231 61 34 chr18 34171720 34173445 -52504103 - L1MD1 LINE L1 -1478 5062 3290 825 218 31 0 chr18 34173464 34173657 -52503891 + L1MA8 LINE L1 5745 5943 -348 1767 236 41 33 chr18 34173662 34174271 -52503277 - L1MD1 LINE L1 -3239 3301 2688 1856 226 50 24 chr18 34174275 34174699 -52502849 - L1MD1 LINE L1 -6088 452 18 2351 100 0 0 chr18 34175062 34175363 -52502185 - AluSx SINE Alu -11 301 1 497 237 23 8 chr18 34175520 34175651 -52501897 - Zaphod DNA AcHobo -499 3532 3400 450 53 0 0 chr18 34175708 34175765 -52501783 + (TATG)n Simple_repeat Simple_repeat 2 58 0 388 208 0 115 chr18 34175791 34175921 -52501627 - MLT2C1 LTR ERVL -68 329 215 255 235 29 0 chr18 34175922 34175990 -52501558 + CT-rich Low_complexity Low_complexity 3 72 0 1098 135 0 0 chr18 34176000 34176185 -52501363 - L1MA4 LINE L1 -6 6294 6110 736 215 52 0 chr18 34176193 34176365 -52501183 - MLT2C1 LTR ERVL -216 181 1 322 203 0 0 chr18 34176376 34176445 -52501103 - Zaphod DNA AcHobo -670 3361 3293 730 187 116 0 chr18 34176488 34176643 -52500905 - MER20 DNA MER1_type -46 173 1 575 246 68 19 chr18 34176667 34176911 -52500637 - Zaphod DNA AcHobo -3417 614 321 1924 216 19 15 chr18 34177193 34177605 -52499943 - MLT2D LTR ERVL 0 414 1 492 280 102 11 chr18 34177647 34177833 -52499715 + MIR SINE MIR 6 208 -54 333 0 0 0 chr18 34177860 34177897 -52499651 + (CA)n Simple_repeat Simple_repeat 2 38 0 20363 154 25 29 chr18 34177915 34180945 -52496603 - L1MA2 LINE L1 0 7723 4682 2326 62 0 7 chr18 34180945 34181234 -52496314 + AluY SINE Alu 5 291 -20 20363 154 25 29 chr18 34181234 34182024 -52495524 - L1MA2 LINE L1 -3041 4682 3890 2172 133 3 0 chr18 34182024 34182326 -52495222 - AluSx SINE Alu -9 303 1 20363 154 25 29 chr18 34182326 34184000 -52493548 - L1MA2 LINE L1 -3833 3890 2210 1166 49 0 0 chr18 34184000 34184144 -52493404 - L1PA5 LINE L1 -3 6151 6008 20363 154 25 29 chr18 34184144 34186403 -52491145 - L1MA2 LINE L1 -5513 2210 10 282 288 0 0 chr18 34187177 34187243 -52490305 - MIR SINE MIR 0 262 197 304 309 124 0 chr18 34187245 34187342 -52490206 + MER81 DNA DNA 6 114 0 18739 92 5 1 chr18 34187514 34190969 -52486579 + L1PA7 LINE L1 2692 6153 -1 433 305 92 6 chr18 34191064 34191228 -52486320 - MIR SINE MIR -26 236 59 1230 260 87 30 chr18 34191729 34192168 -52485380 + LTR16B LTR ERVL 1 464 0 404 196 33 11 chr18 34192621 34192713 -52484835 - MIR SINE MIR -92 170 77 2178 133 67 48 chr18 34193441 34193861 -52483687 - MSTA LTR MaLR 0 428 1 2355 110 0 0 chr18 34194183 34194492 -52483056 + AluSg SINE Alu 1 309 -1 22 0 0 0 chr18 34194608 34194630 -52482918 + AT_rich Low_complexity Low_complexity 1 22 0 1383 288 93 52 chr18 34194854 34196396 -52481152 - L1MCc LINE L1 -4022 3100 1284 1449 154 31 0 chr18 34196645 34196905 -52480643 - AluJb SINE Alu 0 315 49 3291 226 46 1 chr18 34199048 34199809 -52477739 - L1M2b LINE L1 -5225 1984 1190 982 222 120 53 chr18 34200343 34200685 -52476863 + MLT1A1 LTR MaLR 1 365 0 180 77 0 0 chr18 34202695 34202721 -52474827 + (TA)n Simple_repeat Simple_repeat 2 27 0 1363 205 67 32 chr18 34204688 34204971 -52472577 + AluJo SINE Alu 1 293 -19 648 282 88 34 chr18 34205772 34206354 -52471194 + L1MC5 LINE L1 7299 7911 -50 721 323 20 12 chr18 34207262 34207516 -52470032 - MIR SINE MIR -5 257 2 324 276 167 26 chr18 34208267 34208423 -52469125 - MIR SINE MIR -76 186 9 432 288 27 0 chr18 34208997 34209108 -52468440 - MIR3 SINE MIR -10 198 85 643 291 122 0 chr18 34211449 34211679 -52465869 + MIR SINE MIR 5 262 0 1841 106 0 65 chr18 34215619 34215912 -52461636 - AluSg SINE Alu -3 307 34 37 52 0 0 chr18 34216328 34216386 -52461162 + AT_rich Low_complexity Low_complexity 1 58 0 183 42 0 0 chr18 34217270 34217294 -52460254 + (CAA)n Simple_repeat Simple_repeat 2 25 0 524 196 0 0 chr18 34217342 34217434 -52460114 - L1MC1 LINE L1 -18 6315 6224 2949 284 246 17 chr18 34217936 34219833 -52457715 - L2 LINE L2 -2 3311 962 629 324 85 65 chr18 34219835 34220064 -52457484 - L2 LINE L2 -2712 602 379 2056 112 4 0 chr18 34220064 34220340 -52457208 + AluSx SINE Alu 1 277 -35 213 39 0 0 chr18 34220343 34220369 -52457179 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 629 324 85 65 chr18 34220369 34220583 -52456965 - L2 LINE L2 -2936 378 146 753 213 44 0 chr18 34221015 34221151 -52456397 + FRAM SINE Alu 2 143 -33 629 292 50 12 chr18 34222321 34222561 -52454987 + MIR SINE MIR 1 249 -13 358 252 143 24 chr18 34222632 34222842 -52454706 + LTR16A1 LTR ERVL 1 235 -222 333 0 0 0 chr18 34222994 34223031 -52454517 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 342 0 0 0 chr18 34223030 34223068 -52454480 + (GA)n Simple_repeat Simple_repeat 2 39 0 22 70 0 0 chr18 34223097 34223140 -52454408 + AT_rich Low_complexity Low_complexity 1 43 0 261 0 0 0 chr18 34223585 34223614 -52453934 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 211 205 0 0 chr18 34228844 34228883 -52448665 - MIR SINE MIR 0 262 224 351 305 59 43 chr18 34229060 34229247 -52448301 - MIR SINE MIR -71 191 2 226 183 0 84 chr18 34230145 34230216 -52447332 - L1MC1 LINE L1 -1884 5924 5860 693 278 140 24 chr18 34230224 34230638 -52446910 - L2 LINE L2 -1 3312 2851 618 282 34 34 chr18 34230778 34230987 -52446561 - L2 LINE L2 -1 3312 3104 819 340 70 5 chr18 34231033 34231421 -52446127 - L2 LINE L2 -378 2936 2524 363 288 45 8 chr18 34231424 34231556 -52445992 - L1MC1 LINE L1 -2086 5722 5586 319 278 38 53 chr18 34231566 34231699 -52445849 - L1MC1 LINE L1 -2329 5479 5349 22 0 0 0 chr18 34231958 34231980 -52445568 + AT_rich Low_complexity Low_complexity 1 22 0 31 44 0 0 chr18 34232172 34232217 -52445331 + AT_rich Low_complexity Low_complexity 1 45 0 242 287 178 10 chr18 34232717 34232818 -52444730 + L2 LINE L2 3122 3239 -33 233 336 103 13 chr18 34233728 34233960 -52443588 + L3b LINE CR1 1134 1386 -197 2197 113 3 0 chr18 34234057 34234350 -52443198 + AluSx SINE Alu 1 294 -18 282 346 107 48 chr18 34234368 34234677 -52442871 - L2 LINE L2 0 3272 2946 338 185 15 0 chr18 34234680 34234745 -52442803 - L2 LINE L2 -8 3264 3199 1370 110 40 0 chr18 34234808 34235035 -52442513 + L1MA5A LINE L1 6062 6297 0 2051 142 7 0 chr18 34235057 34235353 -52442195 + AluSx SINE Alu 1 298 -14 2947 181 25 5 chr18 34236999 34237550 -52439998 + MER68 LTR ERV1 1 562 0 1047 311 118 7 chr18 34238573 34239069 -52438479 + L2 LINE L2 2616 3198 -115 1469 176 0 4 chr18 34239069 34239307 -52438241 - AluJo SINE Alu -16 296 60 1047 311 118 7 chr18 34239307 34239436 -52438112 + L2 LINE L2 3198 3311 -2 330 206 31 62 chr18 34239673 34239770 -52437778 + MIR SINE MIR 117 210 -52 195 306 134 25 chr18 34240491 34240648 -52436900 - L2 LINE L2 -428 2886 2713 778 326 105 18 chr18 34241302 34241636 -52435912 + L2 LINE L2 949 1311 -2003 1111 195 5 0 chr18 34241641 34241846 -52435702 + MER58A DNA MER1_type 19 224 0 2658 284 62 5 chr18 34241846 34242669 -52434879 + L2 LINE L2 1304 2173 -1141 729 176 78 0 chr18 34242675 34242828 -52434720 + MER58A DNA MER1_type 48 212 -12 525 247 77 6 chr18 34242872 34243042 -52434506 + L2 LINE L2 2306 2487 -827 816 134 0 16 chr18 34243092 34243219 -52434329 + FLAM_C SINE Alu 4 128 -5 385 280 78 26 chr18 34243276 34243544 -52434004 - L1ME4a LINE L1 -214 5907 5626 21 36 0 0 chr18 34245817 34245845 -52431703 + AT_rich Low_complexity Low_complexity 1 28 0 2181 104 0 13 chr18 34246039 34246337 -52431211 - AluSq SINE Alu -19 294 1 271 174 0 0 chr18 34247389 34247435 -52430113 - L2 LINE L2 -4 3309 3264 358 386 97 10 chr18 34247575 34247865 -52429683 + L2 LINE L2 2475 2789 -525 2396 93 3 0 chr18 34248566 34248866 -52428682 - AluSp SINE Alu -12 301 1 2442 96 31 8 chr18 34251516 34251872 -52425676 + THE1B LTR MaLR 1 364 0 1578 209 26 0 chr18 34252301 34252603 -52424945 + AluJo SINE Alu 1 310 -2 371 210 179 61 chr18 34252920 34253149 -52424399 + LTR33 LTR ERVL 4 259 -262 276 267 10 50 chr18 34253215 34253316 -52424232 - MIR SINE MIR -59 203 107 385 268 35 49 chr18 34253734 34253945 -52423603 + MIR SINE MIR 10 212 -50 383 324 160 0 chr18 34254096 34254315 -52423233 + MIR SINE MIR 1 254 -8 281 353 98 37 chr18 34254356 34254600 -52422948 + MIR SINE MIR 3 261 -1 1733 153 7 49 chr18 34254643 34254950 -52422598 - AluJo SINE Alu -18 294 1 181 244 89 78 chr18 34255234 34255324 -52422224 - L2 LINE L2 -27 3245 3155 725 295 34 5 chr18 34255403 34255610 -52421938 + MIR SINE MIR 2 214 -48 1300 173 9 18 chr18 34255705 34255931 -52421617 + MER58A DNA MER1_type 1 224 0 1569 110 0 18 chr18 34255962 34256189 -52421359 + AluSq SINE Alu 1 223 -90 1372 126 57 4 chr18 34256290 34256553 -52420995 + AluSx SINE Alu 14 290 -22 191 59 0 29 chr18 34256558 34256592 -52420956 + (TAAAA)n Simple_repeat Simple_repeat 4 36 0 779 264 35 20 chr18 34258180 34258381 -52419167 + MIR SINE MIR 13 216 -46 633 159 43 7 chr18 34258420 34258558 -52418990 + MLT1C LTR MaLR 1 143 -324 989 201 35 67 chr18 34258672 34258986 -52418562 + MLT1C LTR MaLR 163 466 -1 685 235 82 20 chr18 34259215 34259411 -52418137 - MER3 DNA MER1_type 0 209 2 356 184 11 23 chr18 34259508 34259595 -52417953 - MLT1C LTR MaLR -314 153 68 547 204 48 7 chr18 34259624 34259771 -52417777 - MLT1C LTR MaLR -314 153 1 2022 87 38 0 chr18 34261277 34261566 -52415982 + L1PA14 LINE L1 5862 6161 0 232 225 28 0 chr18 34261630 34261701 -52415847 + (TA)n Simple_repeat Simple_repeat 1 73 0 2258 113 0 10 chr18 34261861 34262170 -52415378 + AluSx SINE Alu 1 306 -6 743 296 149 6 chr18 34262371 34262706 -52414842 + MLT1I LTR MaLR 27 409 0 398 53 18 0 chr18 34263279 34263336 -52414212 + (GA)n Simple_repeat Simple_repeat 1 58 0 765 251 139 48 chr18 34264062 34264437 -52413111 + MLT1I LTR MaLR 1 409 0 485 311 66 31 chr18 34264580 34264808 -52412740 - MIR SINE MIR -6 256 21 271 306 0 24 chr18 34265199 34265284 -52412264 + MIR SINE MIR 34 116 -92 591 298 117 49 chr18 34265288 34265799 -52411749 + L2 LINE L2 2762 3312 -1 215 177 81 32 chr18 34265806 34265868 -52411680 + MIR3 SINE MIR 135 199 -9 300 420 36 9 chr18 34266533 34266757 -52410791 + L2 LINE L2 2804 3033 -239 270 0 0 0 chr18 34269564 34269594 -52407954 + (CA)n Simple_repeat Simple_repeat 1 30 0 374 163 250 0 chr18 34270099 34270191 -52407357 - MER94 DNA DNA 0 134 20 201 147 0 0 chr18 34271806 34271840 -52405708 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 21 57 0 0 chr18 34274058 34274093 -52403455 + AT_rich Low_complexity Low_complexity 1 35 0 2290 106 0 7 chr18 34274117 34274419 -52403129 + AluSq SINE Alu 1 300 -13 1239 125 0 0 chr18 34274419 34274579 -52402969 + AluSp SINE Alu 134 293 -20 214 261 87 0 chr18 34275342 34275411 -52402137 - MIR SINE MIR -64 198 124 200 261 0 0 chr18 34276299 34276345 -52401203 + (CGTG)n Simple_repeat Simple_repeat 4 49 0 225 262 0 33 chr18 34276681 34276732 -52400816 - L3 LINE CR1 -3 1574 1526 281 307 52 100 chr18 34276732 34276917 -52400631 - MER5B DNA MER1_type -2 187 1 3394 101 16 22 chr18 34277115 34277611 -52399937 - MER1A DNA MER1_type 0 529 37 252 326 31 57 chr18 34277624 34277817 -52399731 - L3 LINE CR1 -566 1011 824 369 289 7 59 chr18 34277864 34277999 -52399549 - L2 LINE L2 0 3272 3145 1296 176 69 21 chr18 34278132 34278285 -52399263 - AluSx SINE Alu -8 304 160 2162 65 51 7 chr18 34278285 34278578 -52398970 - AluY SINE Alu -5 306 1 1296 176 69 21 chr18 34278578 34278714 -52398834 - AluSx SINE Alu -152 160 1 351 223 0 83 chr18 34278714 34278835 -52398713 + MIR SINE MIR 112 222 -40 261 261 101 42 chr18 34278896 34279015 -52398533 - L3 LINE CR1 -816 761 636 415 229 166 16 chr18 34279247 34279393 -52398155 + MIR SINE MIR 28 191 -63 1377 176 85 88 chr18 34279783 34280158 -52397390 - MLT1A2 LTR MaLR 0 374 1 263 214 20 92 chr18 34281296 34281394 -52396154 - MIR SINE MIR -80 182 92 268 200 0 0 chr18 34281694 34281744 -52395804 + L2 LINE L2 3263 3312 -1 2132 133 0 0 chr18 34281777 34282077 -52395471 + AluSx SINE Alu 8 307 -5 267 216 45 45 chr18 34282537 34282648 -52394900 + MER113 DNA MER1_type? 1 111 -410 881 0 0 0 chr18 34282704 34282801 -52394747 - AluYa5/8 SINE Alu -7 304 208 181 235 129 83 chr18 34282805 34282881 -52394667 + MER5A DNA MER1_type 49 135 -54 369 0 0 0 chr18 34282881 34282922 -52394626 + (TG)n Simple_repeat Simple_repeat 2 42 0 181 235 129 83 chr18 34282922 34282977 -52394571 + MER5A DNA MER1_type 135 186 -3 204 256 49 15 chr18 34283189 34283258 -52394290 + MIR SINE MIR 32 103 -105 217 231 0 0 chr18 34283306 34283358 -52394190 + CT-rich Low_complexity Low_complexity 5 56 0 436 327 6 31 chr18 34285574 34285587 -52391961 + MER5A DNA MER1_type 4 12 -177 316 300 41 71 chr18 34285587 34285757 -52391791 - MER5A DNA MER1_type -2 187 23 1468 172 52 47 chr18 34285957 34286300 -52391248 + MLT1B LTR MaLR 1 345 -45 198 0 0 0 chr18 34286329 34286351 -52391197 + (CA)n Simple_repeat Simple_repeat 1 22 0 270 200 0 53 chr18 34287939 34288014 -52389534 + L1MB8 LINE L1 5281 5351 -823 1037 167 6 0 chr18 34288042 34288210 -52389338 - FRAM SINE Alu -6 170 2 3959 143 39 53 chr18 34288210 34289051 -52388497 + L1MB8 LINE L1 5341 6169 -9 502 273 91 39 chr18 34289361 34289592 -52387956 - MIR SINE MIR -16 246 4 252 0 0 0 chr18 34289622 34289650 -52387898 + (TC)n Simple_repeat Simple_repeat 1 28 0 378 115 0 0 chr18 34290252 34290313 -52387235 + (CA)n Simple_repeat Simple_repeat 2 62 0 21 0 0 0 chr18 34291318 34291339 -52386209 + AT_rich Low_complexity Low_complexity 1 21 0 330 339 31 112 chr18 34291339 34291731 -52385817 + L2 LINE L2 2896 3255 -17 293 189 0 0 chr18 34293439 34293492 -52384056 + MIR SINE MIR 91 143 -119 295 217 133 48 chr18 34294378 34294454 -52383094 + L2 LINE L2 3182 3267 -46 1209 234 48 24 chr18 34294454 34294787 -52382761 + MER58B DNA MER1_type 1 341 0 583 227 187 25 chr18 34294948 34295146 -52382402 + MIR SINE MIR 6 235 -27 1066 149 0 10 chr18 34296350 34296551 -52380997 - L1MA7 LINE L1 -75 6216 6018 378 0 0 0 chr18 34298316 34298358 -52379190 + (CA)n Simple_repeat Simple_repeat 2 43 0 259 307 0 0 chr18 34299477 34299552 -52377996 + C-rich Low_complexity Low_complexity 2 76 0 213 139 0 0 chr18 34300225 34300268 -52377280 + (CTG)n Simple_repeat Simple_repeat 1 43 0 301 270 0 0 chr18 34300569 34300658 -52376890 + G-rich Low_complexity Low_complexity 5 93 0 564 191 25 88 chr18 34301107 34301141 -52376407 + L1ME3A LINE L1 5764 5799 -371 2039 147 0 0 chr18 34301141 34301433 -52376115 - AluJb SINE Alu -20 292 1 564 191 25 88 chr18 34301433 34301602 -52375946 + L1ME3A LINE L1 5799 5954 -216 327 210 121 81 chr18 34301946 34302070 -52375478 - L2 LINE L2 -4 3309 3181 232 169 0 141 chr18 34302578 34302649 -52374899 - L2 LINE L2 -93 3220 3160 264 91 0 0 chr18 34304227 34304271 -52373277 + (CCCG)n Simple_repeat Simple_repeat 1 44 0 251 114 23 0 chr18 34305008 34305052 -52372496 + GA-rich Low_complexity Low_complexity 1 45 0 263 93 23 0 chr18 34305352 34305395 -52372153 + (TC)n Simple_repeat Simple_repeat 2 45 0 198 0 0 0 chr18 34306069 34306091 -52371457 + (T)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr18 34308032 34308055 -52369493 + AT_rich Low_complexity Low_complexity 1 23 0 209 314 136 17 chr18 34308519 34308637 -52368911 - MIR SINE MIR -94 168 37 259 337 10 10 chr18 34309024 34309122 -52368426 - MIR SINE MIR 0 262 165 1634 225 154 4 chr18 34309135 34309588 -52367960 + MLT1H LTR MaLR 12 532 -17 460 316 72 0 chr18 34309603 34309755 -52367793 - MIR SINE MIR -98 164 2 519 305 30 0 chr18 34309806 34309937 -52367611 - L2 LINE L2 0 3313 3179 258 331 47 24 chr18 34310119 34310246 -52367302 + L2 LINE L2 3175 3304 -9 866 239 44 9 chr18 34310587 34310813 -52366735 + MIR SINE MIR 24 257 -5 258 294 202 8 chr18 34311583 34311702 -52365846 + MIR3 SINE MIR 8 149 -59 4473 178 38 96 chr18 34313468 34314216 -52363332 - L1MC3 LINE L1 -2 7783 6993 288 0 0 0 chr18 34314216 34314248 -52363300 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 4473 178 38 96 chr18 34314248 34314519 -52363029 - L1MC3 LINE L1 -792 6993 6858 991 109 0 27 chr18 34314519 34314703 -52362845 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 4473 178 38 96 chr18 34314703 34315021 -52362527 - L1MC3 LINE L1 -927 6858 6523 26 50 0 0 chr18 34315671 34315711 -52361837 + AT_rich Low_complexity Low_complexity 1 40 0 321 283 208 52 chr18 34315755 34315967 -52361581 + MIR SINE MIR 6 250 -12 230 265 78 49 chr18 34316000 34316102 -52361446 + MIR3 SINE MIR 97 201 -7 1167 244 133 20 chr18 34316281 34316633 -52360915 + MER69 DNA AcHobo 42 433 -2093 24 0 0 0 chr18 34316676 34316700 -52360848 + AT_rich Low_complexity Low_complexity 1 24 0 1136 200 67 16 chr18 34316700 34316878 -52360670 - AluJb SINE Alu -1 311 115 180 0 0 0 chr18 34316878 34316898 -52360650 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1136 200 67 16 chr18 34316898 34316974 -52360574 - AluJb SINE Alu -197 115 44 778 213 42 8 chr18 34316974 34317213 -52360335 + MER69 DNA AcHobo 2142 2388 -138 2397 29 0 4 chr18 34317694 34317970 -52359578 - AluY SINE Alu 0 311 37 186 285 100 31 chr18 34318128 34318258 -52359290 + L2 LINE L2 2178 2316 -998 224 109 0 43 chr18 34318438 34318484 -52359064 + (TATATG)n Simple_repeat Simple_repeat 3 46 0 289 281 288 7 chr18 34320725 34320871 -52356677 + MER5A DNA MER1_type 1 187 -2 653 307 107 30 chr18 34320957 34321358 -52356190 + MLT1J LTR MaLR 3 434 -77 23 0 0 0 chr18 34322219 34322242 -52355306 + AT_rich Low_complexity Low_complexity 1 23 0 958 185 62 0 chr18 34322281 34322459 -52355089 + MER5A DNA MER1_type 1 189 0 27 81 0 0 chr18 34323333 34323395 -52354153 + AT_rich Low_complexity Low_complexity 1 62 0 542 358 50 4 chr18 34323713 34323953 -52353595 + MIR SINE MIR 12 262 0 9179 134 37 11 chr18 34324030 34325201 -52352347 - Tigger2 DNA MER2_type 0 2718 1579 2198 65 14 0 chr18 34325201 34325478 -52352070 + AluSp SINE Alu 1 281 -32 192 40 0 0 chr18 34325478 34325503 -52352045 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 9179 134 37 11 chr18 34325503 34325875 -52351673 - Tigger2 DNA MER2_type -1138 1580 1134 1254 157 102 56 chr18 34325893 34326198 -52351350 - L1PA12 LINE L1 -3 6165 5847 1762 129 39 36 chr18 34326199 34326533 -52351015 - Tigger2 DNA MER2_type -1565 1153 819 2681 147 14 41 chr18 34326533 34327186 -52350362 + pTR5 LTR ERV1 743 1377 -1061 450 51 0 0 chr18 34327184 34327243 -52350305 + pTR5 LTR ERV1 334 392 -2046 * 3486 181 79 13 chr18 34327243 34328004 -52349544 - Tigger2 DNA MER2_type -1896 822 12 11106 85 4 9 chr18 34328005 34329646 -52347902 + L1P LINE L1 3496 5128 -1018 2442 87 0 0 chr18 34329743 34330054 -52347494 + AluY SINE Alu 1 311 0 180 278 133 78 chr18 34330086 34330176 -52347372 - L2 LINE L2 -20 3252 3158 5214 206 58 19 chr18 34330467 34331865 -52345683 + Charlie1a DNA MER1_type 3 1454 -1 251 188 0 14 chr18 34332290 34332359 -52345189 + (TA)n Simple_repeat Simple_repeat 2 69 0 600 259 86 36 chr18 34333042 34333262 -52344286 + MIR SINE MIR 20 250 -12 240 35 0 0 chr18 34333449 34333478 -52344070 + (CAA)n Simple_repeat Simple_repeat 2 30 0 24 0 0 0 chr18 34333772 34333796 -52343752 + AT_rich Low_complexity Low_complexity 1 24 0 253 288 112 32 chr18 34336251 34336376 -52341172 - L2 LINE L2 0 3313 3179 414 297 25 0 chr18 34337249 34337367 -52340181 + MIR SINE MIR 49 169 -93 1538 214 24 0 chr18 34337555 34337844 -52339704 - AluJo SINE Alu -13 299 4 604 256 68 64 chr18 34339298 34339548 -52338000 + MIR SINE MIR 12 262 0 257 234 0 31 chr18 34339554 34339618 -52337930 + L2 LINE L2 3237 3298 -15 272 315 118 0 chr18 34340034 34340161 -52337387 - MIR3 SINE MIR -59 149 8 238 370 31 0 chr18 34340437 34340564 -52336984 + L2 LINE L2 3183 3313 0 2151 123 0 13 chr18 34341904 34342213 -52335335 + AluY SINE Alu 1 305 -6 1593 188 94 30 chr18 34342528 34342900 -52334648 - MSTD LTR MaLR 0 396 1 268 192 172 0 chr18 34344630 34344781 -52332767 + (CTAGGG)n Simple_repeat Simple_repeat 3 179 0 * 375 339 0 11 chr18 34344672 34344852 -52332696 + (TAG)n Simple_repeat Simple_repeat 1 178 0 766 249 30 0 chr18 34345274 34345443 -52332105 - MIR SINE MIR -74 188 15 22 56 0 0 chr18 34345615 34345651 -52331897 + AT_rich Low_complexity Low_complexity 1 36 0 245 378 24 16 chr18 34346148 34346275 -52331273 - MER91A DNA MER1_type -12 184 57 184 226 129 43 chr18 34346998 34347091 -52330457 - L2 LINE L2 -92 3221 3121 2384 104 0 0 chr18 34347102 34347409 -52330139 + AluSq SINE Alu 1 307 -6 313 284 31 74 chr18 34348703 34348932 -52328616 + L1ME LINE L1 543 761 -5309 2659 255 87 88 chr18 34348958 34349409 -52328139 + L1ME LINE L1 2249 2699 -3405 1767 184 30 0 chr18 34349409 34349741 -52327807 - MER2 DNA MER2_type -2 342 1 2659 255 87 88 chr18 34349741 34352020 -52325528 + L1ME LINE L1 2699 4978 -1126 939 212 9 36 chr18 34352020 34352242 -52325306 + MER20 DNA MER1_type 1 216 -3 2659 255 87 88 chr18 34352242 34352473 -52325075 + L1ME LINE L1 4978 5208 -896 348 24 0 0 chr18 34352473 34352514 -52325034 + (TA)n Simple_repeat Simple_repeat 2 42 0 2659 255 87 88 chr18 34352514 34352931 -52324617 + L1ME LINE L1 5208 5625 -479 1321 217 99 28 chr18 34353002 34353495 -52324053 + L1ME3A LINE L1 5639 6162 -8 1209 193 33 4 chr18 34353571 34353814 -52323734 + L1PB4 LINE L1 5900 6149 -7 28 79 0 0 chr18 34353819 34353882 -52323666 + AT_rich Low_complexity Low_complexity 1 63 0 2004 130 3 3 chr18 34354326 34354626 -52322922 - AluSq SINE Alu -13 300 1 1228 216 61 15 chr18 34355086 34355414 -52322134 + MER2 DNA MER2_type 1 343 -1 297 222 83 125 chr18 34356403 34356547 -52321001 + L2 LINE L2 3171 3308 -5 429 264 113 13 chr18 34356910 34357069 -52320479 + MER5A DNA MER1_type 14 188 -1 673 152 9 0 chr18 34357545 34357657 -52319891 + FLAM_A SINE Alu 27 139 -3 203 184 0 0 chr18 34358970 34359008 -52318540 + T-rich Low_complexity Low_complexity 1 38 0 2075 142 0 3 chr18 34360253 34360555 -52316993 + AluSx SINE Alu 1 301 -11 308 298 0 21 chr18 34360588 34360682 -52316866 + L1MC4 LINE L1 6614 6705 -1337 21 0 0 0 chr18 34360747 34360768 -52316780 + AT_rich Low_complexity Low_complexity 1 21 0 1326 116 19 0 chr18 34361149 34361460 -52316088 - LTR47A LTR ERVL 0 452 89 711 187 25 17 chr18 34361470 34361641 -52315907 - MLT1F1 LTR MaLR -371 184 3 222 118 0 0 chr18 34361781 34361815 -52315733 + (TG)n Simple_repeat Simple_repeat 1 34 0 324 70 0 0 chr18 34362569 34362612 -52314936 + (TG)n Simple_repeat Simple_repeat 2 44 0 1082 163 0 0 chr18 34362615 34362775 -52314773 - AluJb SINE Alu -22 290 131 306 0 0 0 chr18 34364480 34364514 -52313034 + (TG)n Simple_repeat Simple_repeat 2 35 0 22 0 0 0 chr18 34364742 34364764 -52312784 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr18 34364816 34364837 -52312711 + (T)n Simple_repeat Simple_repeat 1 21 0 2558 46 0 3 chr18 34364984 34365289 -52312259 - AluY SINE Alu -7 304 1 786 269 24 12 chr18 34365945 34366198 -52311350 + MIR SINE MIR 7 262 0 219 244 89 49 chr18 34366244 34366367 -52311181 - L2 LINE L2 0 3313 3186 312 348 71 11 chr18 34366706 34366890 -52310658 + MIR SINE MIR 20 214 -48 1785 296 81 29 chr18 34367166 34367771 -52309777 - L2 LINE L2 -351 2963 2316 1825 132 82 28 chr18 34367771 34367940 -52309608 - THE1C LTR MaLR 0 375 216 279 0 0 0 chr18 34367940 34367971 -52309577 + (GA)n Simple_repeat Simple_repeat 1 31 0 1825 132 82 28 chr18 34367971 34368157 -52309391 - THE1C LTR MaLR -159 216 1 1785 296 81 29 chr18 34368157 34368247 -52309301 - L2 LINE L2 -998 2316 2232 669 291 35 44 chr18 34369110 34369540 -52308008 + LTR16B LTR ERVL 34 459 -5 445 276 105 28 chr18 34370280 34370461 -52307087 + MIR3 SINE MIR 11 205 -3 21 71 0 0 chr18 34371027 34371069 -52306479 + AT_rich Low_complexity Low_complexity 1 42 0 319 268 157 33 chr18 34371495 34371648 -52305900 - MIR SINE MIR -78 184 13 272 325 12 0 chr18 34371781 34371864 -52305684 + MIR SINE MIR 30 113 -149 215 152 22 0 chr18 34372208 34372254 -52305294 + GA-rich Low_complexity Low_complexity 3 49 0 239 260 89 41 chr18 34372801 34372924 -52304624 - MIR SINE MIR -48 214 86 601 285 107 26 chr18 34373984 34374489 -52303059 - L1ME4a LINE L1 -29 6092 5547 2781 198 38 24 chr18 34375022 34375647 -52301901 - LTR27 LTR ERV1 0 636 3 212 0 0 35 chr18 34376453 34376482 -52301066 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1875 174 0 0 chr18 34376486 34376767 -52300781 - AluSx SINE Alu -31 281 1 359 302 38 31 chr18 34376837 34376996 -52300552 - MIR SINE MIR 0 262 103 210 241 19 0 chr18 34377744 34377798 -52299750 + MIR SINE MIR 160 214 -48 184 163 47 0 chr18 34378307 34378350 -52299198 - MIR3 SINE MIR 0 208 164 237 311 39 0 chr18 34378887 34378990 -52298558 + MIR SINE MIR 118 224 -38 785 297 0 5 chr18 34381456 34381678 -52295870 + MIR SINE MIR 12 232 -30 4000 219 47 6 chr18 34381772 34382804 -52294744 + L1MB7 LINE L1 3762 4835 -1311 1736 208 69 37 chr18 34382811 34383321 -52294227 + L1MB7 LINE L1 5327 5852 -332 1231 184 18 63 chr18 34383451 34383638 -52293910 + L1MB7 LINE L1 5860 6027 -157 1964 130 0 67 chr18 34383638 34383968 -52293580 - AluSx SINE Alu -4 308 1 1231 184 18 63 chr18 34383968 34384111 -52293437 + L1MB7 LINE L1 6027 6175 -9 23 0 0 0 chr18 34384625 34384648 -52292900 + AT_rich Low_complexity Low_complexity 1 23 0 234 91 0 0 chr18 34385682 34385715 -52291833 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 268 273 61 69 chr18 34385859 34386090 -52291458 + HAL1 LINE L1 1119 1347 -1160 263 296 118 77 chr18 34386163 34386758 -52290790 + HAL1 LINE L1 1549 2167 -340 266 0 29 0 chr18 34387530 34387564 -52289984 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 2064 117 7 3 chr18 34388020 34388328 -52289220 - AluSx SINE Alu 0 309 1 710 296 34 5 chr18 34388523 34388729 -52288819 - MIR SINE MIR -17 245 34 21 0 0 0 chr18 34388814 34388835 -52288713 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 34388945 34388967 -52288581 + AT_rich Low_complexity Low_complexity 1 22 0 41012 32 21 1 chr18 34388967 34394999 -52282549 - L1PA2 LINE L1 0 6155 1 2296 99 0 13 chr18 34395027 34395521 -52282027 - AluY SINE Alu 0 311 3 317 302 11 22 chr18 34395619 34395801 -52281747 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr18 34395805 34395827 -52281721 + AT_rich Low_complexity Low_complexity 1 22 0 1399 158 82 51 chr18 34396465 34396819 -52280729 + MLT1A1 LTR MaLR 1 365 0 1340 234 123 31 chr18 34397055 34397562 -52279986 + L2 LINE L2 2761 3310 -3 276 355 138 0 chr18 34398589 34398727 -52278821 + MIR SINE MIR 10 166 -96 198 143 0 0 chr18 34400166 34400201 -52277347 + (TG)n Simple_repeat Simple_repeat 2 36 0 459 221 20 133 chr18 34403273 34403468 -52274080 - MER5B DNA MER1_type -1 177 5 851 146 0 53 chr18 34404592 34404743 -52272805 + FRAM SINE Alu 1 40 0 387 0 0 0 chr18 34404763 34404806 -52272742 + (CA)n Simple_repeat Simple_repeat 2 44 0 469 316 105 66 chr18 34404812 34405277 -52272271 + L2 LINE L2 2136 2628 -686 2082 187 129 7 chr18 34405277 34405727 -52271821 + MLT1D LTR MaLR 1 505 0 469 316 105 66 chr18 34405727 34405825 -52271723 + L2 LINE L2 2628 2721 -593 1847 139 4 0 chr18 34406428 34406725 -52270823 + AluSp SINE Alu 27 324 0 1641 168 25 0 chr18 34406790 34407064 -52270484 + AluJb SINE Alu 27 307 -5 2081 120 33 0 chr18 34407207 34407507 -52270041 - AluSx SINE Alu -2 310 1 2275 109 0 3 chr18 34407764 34408066 -52269482 - AluSx SINE Alu -11 301 1 273 122 41 0 chr18 34409427 34409476 -52268072 + MER94 DNA DNA 2 52 -82 954 228 0 0 chr18 34409858 34410077 -52267471 + L1PB4 LINE L1 5936 6154 -2 269 283 304 7 chr18 34410760 34410898 -52266650 - MER5A DNA MER1_type -1 188 10 598 162 17 0 chr18 34411669 34411786 -52265762 + L1MA8 LINE L1 6173 6291 0 484 333 32 16 chr18 34413271 34413457 -52264091 - MIR SINE MIR -54 208 20 1940 97 0 74 chr18 34414382 34414681 -52262867 - AluSc SINE Alu -32 277 1 193 382 0 0 chr18 34415343 34415419 -52262129 - L2 LINE L2 -3 3310 3235 238 297 109 10 chr18 34415928 34416029 -52261519 + L2 LINE L2 3201 3311 -2 288 257 179 14 chr18 34416078 34416218 -52261330 + MLT1H LTR MaLR 39 201 -348 359 323 68 25 chr18 34416662 34416894 -52260654 + MIR SINE MIR 26 262 0 2174 176 78 5 chr18 34417130 34417527 -52260021 + MSTB LTR MaLR 1 426 0 8395 184 49 3 chr18 34417527 34419105 -52258443 + MSTB-int LTR MaLR 1 1651 0 1028 162 30 5 chr18 34419105 34419302 -52258246 + MSTB LTR MaLR 1 202 -224 2012 148 24 3 chr18 34419302 34419599 -52257949 + AluSx SINE Alu 1 303 -9 1110 197 34 8 chr18 34419789 34420023 -52257525 + MSTB LTR MaLR 185 424 -2 510 324 46 37 chr18 34420060 34420301 -52257247 + MIR SINE MIR 20 262 0 227 354 52 49 chr18 34421310 34421615 -52255933 - LTR16C LTR ERVL -96 395 90 216 0 0 0 chr18 34422032 34422056 -52255492 + (CA)n Simple_repeat Simple_repeat 2 25 0 1024 100 0 0 chr18 34422260 34422410 -52255138 + L1MA4 LINE L1 6143 6292 -8 301 333 71 12 chr18 34422937 34423105 -52254443 - MLT1J2 LTR MaLR -23 427 250 516 277 66 0 chr18 34423140 34423306 -52254242 - MLT1J1 LTR MaLR -267 179 3 1423 232 50 21 chr18 34424002 34424381 -52253167 - MLT1B LTR MaLR 0 390 1 2252 88 0 14 chr18 34424907 34425202 -52252346 - AluSx SINE Alu -21 291 1 261 0 0 0 chr18 34425593 34425622 -52251926 + (TG)n Simple_repeat Simple_repeat 2 30 0 21 0 0 0 chr18 34425721 34425742 -52251806 + AT_rich Low_complexity Low_complexity 1 21 0 189 175 0 0 chr18 34426566 34426606 -52250942 + (TG)n Simple_repeat Simple_repeat 1 40 0 184 343 156 30 chr18 34427638 34428175 -52249373 + L2 LINE L2 2293 2897 -417 558 371 85 21 chr18 34428208 34428677 -52248871 + L2 LINE L2 2812 3310 -3 1966 102 0 61 chr18 34429347 34429660 -52247888 + AluSg SINE Alu 1 294 -16 459 349 26 5 chr18 34429744 34429939 -52247609 - MIR SINE MIR -10 252 54 225 173 27 27 chr18 34432467 34432542 -52245006 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 305 306 73 124 chr18 34433876 34434344 -52243204 - L2 LINE L2 0 3272 2829 1876 92 17 61 chr18 34434354 34434648 -52242900 + AluSx SINE Alu 32 312 0 2351 85 0 19 chr18 34434749 34435056 -52242492 - AluY SINE Alu -10 301 1 244 308 154 0 chr18 34435981 34436059 -52241489 + L2 LINE L2 3183 3272 0 252 281 169 51 chr18 34439835 34440013 -52237535 + L2 LINE L2 3114 3312 -1 222 136 0 0 chr18 34440655 34440699 -52236849 + (TG)n Simple_repeat Simple_repeat 2 45 0 301 253 116 34 chr18 34440994 34441140 -52236408 + MIR SINE MIR 104 261 -1 663 256 7 7 chr18 34441257 34441394 -52236154 + MIR SINE MIR 13 149 -113 487 317 43 19 chr18 34441852 34442013 -52235535 - MIR SINE MIR -75 187 23 2675 130 19 9 chr18 34442829 34443253 -52234295 + MSTA LTR MaLR 1 428 0 237 33 0 0 chr18 34444161 34444191 -52233357 + (T)n Simple_repeat Simple_repeat 1 30 0 240 35 0 0 chr18 34444299 34444328 -52233220 + (A)n Simple_repeat Simple_repeat 1 29 0 347 344 160 27 chr18 34444521 34445003 -52232545 - L2 LINE L2 -553 2761 2216 202 222 0 0 chr18 34445460 34445496 -52232052 + (CATATA)n Simple_repeat Simple_repeat 3 38 0 202 272 184 19 chr18 34445518 34445621 -52231927 - MIR SINE MIR -120 142 23 203 175 25 0 chr18 34446153 34446193 -52231355 + (ATG)n Simple_repeat Simple_repeat 3 43 0 24 32 0 0 chr18 34447317 34447348 -52230200 + AT_rich Low_complexity Low_complexity 1 31 0 2057 174 17 29 chr18 34450027 34450446 -52227102 - MLT2D LTR ERVL 0 414 1 1959 187 58 70 chr18 34452080 34452636 -52224912 - MER44D DNA MER2_type -1 604 1 458 237 201 0 chr18 34452887 34453026 -52224522 + MER5A DNA MER1_type 10 176 -13 1751 72 4 75 chr18 34453030 34453308 -52224240 + AluY SINE Alu 49 306 -5 183 42 0 0 chr18 34453409 34453433 -52224115 + (A)n Simple_repeat Simple_repeat 1 24 0 316 317 0 0 chr18 34453467 34453549 -52223999 - L3 LINE CR1 -75 1502 1421 283 254 0 0 chr18 34453587 34453650 -52223898 + L2 LINE L2 3251 3313 0 411 347 78 8 chr18 34453719 34453961 -52223587 - L3 LINE CR1 -280 1297 1039 405 309 9 0 chr18 34454839 34454949 -52222599 + LTR33 LTR ERVL 1 111 -410 329 308 19 31 chr18 34454947 34455106 -52222442 + LTR33 LTR ERVL 326 482 -39 * 22 80 0 0 chr18 34455178 34455228 -52222320 + AT_rich Low_complexity Low_complexity 1 50 0 4824 149 13 17 chr18 34455243 34456158 -52221390 - L1MA9 LINE L1 -24 6288 5278 361 312 220 14 chr18 34456917 34457199 -52220349 + L3 LINE CR1 974 1313 -264 246 32 0 0 chr18 34457204 34457235 -52220313 + (TC)n Simple_repeat Simple_repeat 2 32 0 3871 234 88 37 chr18 34457258 34458681 -52218867 + L1ME1 LINE L1 3608 5102 -1044 2557 40 0 0 chr18 34458757 34459054 -52218494 + AluY SINE Alu 1 297 -14 1913 247 22 0 chr18 34459058 34459520 -52218028 + L1ME1 LINE L1 5326 5797 -369 683 233 45 67 chr18 34459522 34459835 -52217713 + L1ME1 LINE L1 5857 6162 -4 338 57 19 0 chr18 34459840 34459893 -52217655 + (GA)n Simple_repeat Simple_repeat 1 54 0 207 186 0 0 chr18 34459954 34459997 -52217551 + CT-rich Low_complexity Low_complexity 2 44 0 252 0 0 0 chr18 34460720 34460748 -52216800 + (TA)n Simple_repeat Simple_repeat 1 28 0 306 0 0 0 chr18 34461300 34461334 -52216214 + (CA)n Simple_repeat Simple_repeat 2 35 0 499 235 0 37 chr18 34462114 34462250 -52215298 - MER94 DNA DNA -2 132 2 289 256 11 33 chr18 34462306 34462396 -52215152 + 7SK RNA RNA 1 88 -105 2554 133 35 12 chr18 34464101 34464523 -52213025 + MSTB1 LTR MaLR 1 432 0 21 36 0 0 chr18 34466281 34466309 -52211239 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr18 34466593 34466617 -52210931 + (T)n Simple_repeat Simple_repeat 1 24 0 2703 23 0 3 chr18 34466742 34467049 -52210499 - AluY SINE Alu -5 306 1 213 242 0 0 chr18 34468209 34468291 -52209257 + CT-rich Low_complexity Low_complexity 2 86 -14 222 37 0 0 chr18 34468291 34468318 -52209230 + (TG)n Simple_repeat Simple_repeat 2 28 0 213 242 0 0 chr18 34468318 34468334 -52209214 + CT-rich Low_complexity Low_complexity 85 100 0 23 0 0 0 chr18 34469556 34469579 -52207969 + AT_rich Low_complexity Low_complexity 1 23 0 240 250 0 66 chr18 34469582 34469658 -52207890 - L2 LINE L2 -82 3231 3161 1145 113 4 100 chr18 34471534 34471763 -52205785 - L1PA13 LINE L1 -5 6158 5952 24 0 0 0 chr18 34471776 34471800 -52205748 + AT_rich Low_complexity Low_complexity 1 24 0 237 243 14 40 chr18 34475004 34475078 -52202470 - L2 LINE L2 -4 3268 3197 182 336 14 64 chr18 34475192 34475332 -52202216 - L2 LINE L2 -150 3122 2990 2080 119 44 39 chr18 34475711 34476072 -52201476 + THE1B LTR MaLR 2 364 0 206 359 58 10 chr18 34477593 34477696 -52199852 + L2 LINE L2 3202 3309 -4 2115 76 0 4 chr18 34477802 34478078 -52199470 - AluY SINE Alu 0 311 37 3519 227 62 26 chr18 34478248 34479659 -52197889 - L1ME LINE L1 -516 5719 4238 * 4639 266 65 29 chr18 34479658 34481606 -52195942 - L1ME LINE L1 -4378 2018 1 237 303 92 8 chr18 34481940 34482059 -52195489 + L2 LINE L2 2197 2325 -989 23 0 0 0 chr18 34482282 34482305 -52195243 + AT_rich Low_complexity Low_complexity 1 23 0 1911 149 67 14 chr18 34482313 34482669 -52194879 - THE1C LTR MaLR 0 375 1 8990 130 25 48 chr18 34482669 34483808 -52193740 - THE1C-int LTR MaLR 0 1580 487 2436 70 3 0 chr18 34483808 34484107 -52193441 - AluY SINE Alu -11 300 1 8990 130 25 48 chr18 34484107 34484536 -52193012 - THE1C-int LTR MaLR -1093 487 49 185 342 135 16 chr18 34486454 34486647 -52190901 + L2 LINE L2 3097 3312 -1 192 77 0 0 chr18 34486658 34486684 -52190864 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 56 0 0 chr18 34487120 34487156 -52190392 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr18 34487320 34487352 -52190196 + AT_rich Low_complexity Low_complexity 1 32 0 235 290 65 11 chr18 34487590 34487683 -52189865 + MIR SINE MIR 85 182 -80 198 0 0 0 chr18 34487932 34487954 -52189594 + (A)n Simple_repeat Simple_repeat 1 22 0 378 298 114 13 chr18 34488031 34488189 -52189359 + L2 LINE L2 3140 3313 0 2841 93 0 5 chr18 34488461 34488838 -52188710 - THE1C LTR MaLR 0 375 1 320 308 133 35 chr18 34489550 34489693 -52187855 + MIR3 SINE MIR 42 198 -10 198 0 0 0 chr18 34490103 34490125 -52187423 + (T)n Simple_repeat Simple_repeat 1 22 0 181 241 11 11 chr18 34540407 34540494 -52137054 + (TCTCTG)n Simple_repeat Simple_repeat 4 90 0 1141 231 16 0 chr18 34540966 34541213 -52136335 + MER66A LTR ERV1 1 251 -227 506 319 123 0 chr18 34543473 34543677 -52133871 - MIR SINE MIR 0 262 34 22 35 0 0 chr18 34545103 34545132 -52132416 + AT_rich Low_complexity Low_complexity 1 29 0 200 280 93 13 chr18 34545707 34545782 -52131766 + MIR3 SINE MIR 118 198 -10 33 25 0 0 chr18 34547160 34547200 -52130348 + AT_rich Low_complexity Low_complexity 1 40 0 5297 236 34 99 chr18 34548971 34551152 -52126396 + L1MA4 LINE L1 7 2045 -4804 3911 181 30 51 chr18 34551148 34552046 -52125502 + L1MA6 LINE L1 5422 6300 0 * 13802 202 46 19 chr18 34552034 34552501 -52125047 + L1MA4 LINE L1 2047 2500 -4502 2552 68 0 0 chr18 34552501 34552808 -52124740 - AluY SINE Alu -4 307 1 13802 202 46 19 chr18 34552808 34554210 -52123338 + L1MA4 LINE L1 2500 3863 -3139 1953 123 43 0 chr18 34554210 34554510 -52123038 + AluSp SINE Alu 1 313 0 13802 202 46 19 chr18 34554510 34557459 -52120089 + L1MA4 LINE L1 3863 6996 -6 398 365 67 29 chr18 34558087 34558533 -52119015 + L3 LINE CR1 247 709 -868 21 0 0 0 chr18 34558854 34558875 -52118673 + AT_rich Low_complexity Low_complexity 1 21 0 202 319 14 0 chr18 34559063 34559132 -52118416 - MIR SINE MIR -27 235 166 33 25 0 0 chr18 34559299 34559339 -52118209 + AT_rich Low_complexity Low_complexity 1 40 0 706 159 0 0 chr18 34559447 34559554 -52117994 - AluSq/x SINE Alu -206 107 1 343 283 136 73 chr18 34559752 34560148 -52117400 - L1ME4a LINE L1 0 6121 5701 507 17 0 0 chr18 34560152 34560212 -52117336 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 465 325 141 15 chr18 34560331 34560813 -52116735 - L2 LINE L2 -36 3277 2734 25 75 0 0 chr18 34560813 34560866 -52116682 + AT_rich Low_complexity Low_complexity 1 53 0 775 248 147 11 chr18 34560869 34561135 -52116413 - L1ME3A LINE L1 -25 6145 5844 1070 288 167 36 chr18 34561143 34561833 -52115715 - L2 LINE L2 -1130 2184 1405 714 210 11 6 chr18 34562032 34562213 -52115335 + L1MA1 LINE L1 6121 6302 0 309 251 81 85 chr18 34562241 34562332 -52115216 - HAL1b LINE L1 -792 556 466 2170 109 0 7 chr18 34562332 34562625 -52114923 + AluSq SINE Alu 1 291 -22 309 251 81 85 chr18 34562625 34562768 -52114780 - HAL1b LINE L1 -882 466 323 1723 172 12 94 chr18 34563955 34564132 -52113416 + MLT1B LTR MaLR 1 191 -199 11136 188 16 0 chr18 34564132 34567081 -52110467 + L1PA14 LINE L1 3194 6161 0 1723 172 12 94 chr18 34567081 34567328 -52110220 + MLT1B LTR MaLR 191 390 0 1844 154 7 7 chr18 34568837 34569130 -52108418 + AluJb SINE Alu 1 293 -19 827 73 0 0 chr18 34569269 34569378 -52108170 + L1PA5 LINE L1 6038 6146 -8 30 59 0 0 chr18 34569378 34569429 -52108119 + AT_rich Low_complexity Low_complexity 1 51 0 754 275 41 12 chr18 34569694 34569936 -52107612 - MIR SINE MIR 0 262 14 282 327 78 15 chr18 34570000 34570205 -52107343 - L1ME4a LINE L1 -502 5619 5402 304 244 118 61 chr18 34570555 34570784 -52106764 - L1ME4a LINE L1 -1128 5018 4777 2279 93 3 3 chr18 34571179 34571481 -52106067 + AluSg SINE Alu 1 302 -8 2618 49 0 0 chr18 34571930 34572238 -52105310 + AluY SINE Alu 1 308 -3 325 250 52 0 chr18 34572248 34572344 -52105204 + MIR SINE MIR 160 260 -2 25 31 0 0 chr18 34572521 34572553 -52104995 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr18 34572923 34572953 -52104595 + AT_rich Low_complexity Low_complexity 1 30 0 405 198 0 0 chr18 34573021 34573107 -52104441 + (TA)n Simple_repeat Simple_repeat 1 86 0 388 233 101 0 chr18 34573203 34573332 -52104216 + MER103 DNA DNA 1 142 -24 221 218 18 18 chr18 34573332 34573391 -52104157 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 722 162 109 114 chr18 34573408 34573618 -52103930 - MER20 DNA MER1_type 0 219 11 405 0 0 0 chr18 34573618 34573663 -52103885 + (CA)n Simple_repeat Simple_repeat 2 46 0 216 0 0 0 chr18 34573682 34573706 -52103842 + (CA)n Simple_repeat Simple_repeat 2 25 0 231 36 0 0 chr18 34574159 34574187 -52103361 + (TG)n Simple_repeat Simple_repeat 2 29 0 333 0 0 0 chr18 34574215 34574252 -52103296 + (TG)n Simple_repeat Simple_repeat 2 38 0 1458 208 73 15 chr18 34574846 34575255 -52102293 - L1ME4a LINE L1 -1394 4752 4320 290 297 60 87 chr18 34575482 34575667 -52101881 + MIR3 SINE MIR 20 199 -9 30 0 0 0 chr18 34576242 34576272 -52101276 + AT_rich Low_complexity Low_complexity 1 30 0 23 78 0 0 chr18 34576418 34576469 -52101079 + AT_rich Low_complexity Low_complexity 1 51 0 23 0 0 0 chr18 34576946 34576969 -52100579 + AT_rich Low_complexity Low_complexity 1 23 0 1759 146 0 0 chr18 34577978 34578245 -52099303 - AluSx SINE Alu -8 304 38 325 243 172 10 chr18 34578462 34578596 -52098952 - MIR SINE MIR -63 145 35 23 54 0 0 chr18 34580106 34580143 -52097405 + AT_rich Low_complexity Low_complexity 1 37 0 351 224 0 0 chr18 34580379 34580455 -52097093 + L1ME LINE L1 5584 5659 -462 21 0 0 0 chr18 34581580 34581601 -52095947 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 34582092 34582113 -52095435 + AT_rich Low_complexity Low_complexity 1 21 0 74 12 0 0 chr18 34582919 34583000 -52094548 + AT_rich Low_complexity Low_complexity 1 81 0 330 310 55 0 chr18 34583421 34583566 -52093982 - MIR SINE MIR 0 262 110 1322 273 130 21 chr18 34583573 34584114 -52093434 + MLT1G1 LTR MaLR 1 588 -2 309 278 0 33 chr18 34584121 34584211 -52093337 - MIR SINE MIR -160 102 16 22 70 0 0 chr18 34587676 34587719 -52089829 + AT_rich Low_complexity Low_complexity 1 43 0 50 59 0 0 chr18 34587810 34587895 -52089653 + AT_rich Low_complexity Low_complexity 1 85 0 24 0 0 0 chr18 34588735 34588759 -52088789 + AT_rich Low_complexity Low_complexity 1 24 0 211 250 154 39 chr18 34588770 34588874 -52088674 - MIR SINE MIR -75 133 18 189 0 0 0 chr18 34589020 34589041 -52088507 + (A)n Simple_repeat Simple_repeat 1 21 0 986 235 14 5 chr18 34589401 34589622 -52087926 + MER58A DNA MER1_type 1 223 -1 2230 128 11 6 chr18 34589657 34590010 -52087538 - THE1A LTR MaLR 0 355 1 204 324 10 10 chr18 34590986 34591088 -52086460 + T-rich Low_complexity Low_complexity 3 104 0 181 212 0 0 chr18 34591969 34592002 -52085546 + L2 LINE L2 3265 3297 -16 22 0 0 0 chr18 34592097 34592119 -52085429 + AT_rich Low_complexity Low_complexity 1 22 0 201 121 0 0 chr18 34592897 34592930 -52084618 + (GAAA)n Simple_repeat Simple_repeat 2 34 0 1625 265 83 46 chr18 34593232 34593795 -52083753 + MLT1E2 LTR MaLR 40 623 -3 24 32 0 0 chr18 34593893 34593924 -52083624 + AT_rich Low_complexity Low_complexity 1 31 0 801 156 0 7 chr18 34593995 34594136 -52083412 + Ricksha DNA DNA 1 140 -1906 5059 141 20 10 chr18 34594159 34595039 -52082509 + Ricksha DNA DNA 2350 3238 -8 2082 263 99 35 chr18 34596151 34597944 -52079604 - L1ME3A LINE L1 -72 6098 4194 327 295 39 13 chr18 34597953 34598109 -52079439 - L1ME3A LINE L1 -2143 4003 3844 21 0 0 0 chr18 34598704 34598725 -52078823 + AT_rich Low_complexity Low_complexity 1 21 0 24 77 0 0 chr18 34601288 34601340 -52076208 + AT_rich Low_complexity Low_complexity 1 52 0 2221 219 62 25 chr18 34602986 34603539 -52074009 - MLT1E3 LTR MaLR 0 624 52 201 74 0 0 chr18 34603542 34603569 -52073979 + (TA)n Simple_repeat Simple_repeat 2 28 0 3902 216 37 24 chr18 34603809 34604600 -52072948 + ERVL-C1 LTR ERVL 3591 4395 -1369 1670 34 0 10 chr18 34604600 34604806 -52072742 + L1PA5 LINE L1 5951 6154 0 3902 216 37 24 chr18 34604806 34604860 -52072688 + ERVL-C1 LTR ERVL 4395 4447 -1317 984 218 107 0 chr18 34604851 34605094 -52072454 - ERVL LTR ERVL -479 5285 5017 * 4721 223 56 58 chr18 34605096 34605566 -52071982 + ERVL-C1 LTR ERVL 4460 4929 -835 7457 44 5 0 chr18 34605566 34607269 -52070279 + L1PA5 LINE L1 4440 6154 0 4721 223 56 58 chr18 34607269 34608097 -52069451 + ERVL-C1 LTR ERVL 4929 5756 -8 667 226 67 58 chr18 34608097 34608485 -52069063 + MLT2C1 LTR ERVL 1 389 -75 247 349 0 64 chr18 34608709 34608818 -52068730 + MIR SINE MIR 37 138 -70 1607 195 45 12 chr18 34608866 34609200 -52068348 + MER7A DNA MER2_type 1 343 -3 252 211 278 38 chr18 34612633 34612766 -52064782 - L2 LINE L2 0 3313 3149 318 256 96 56 chr18 34613133 34613258 -52064290 - L2 LINE L2 -625 2689 2560 334 189 38 44 chr18 34613291 34613450 -52064098 + (TA)n Simple_repeat Simple_repeat 2 159 0 254 125 42 14 chr18 34613463 34613535 -52064013 + (TA)n Simple_repeat Simple_repeat 1 74 0 1029 197 0 100 chr18 34613567 34613720 -52063828 + MER8 DNA MER2_type 6 173 -66 1861 137 23 3 chr18 34613720 34614026 -52063522 - AluSx SINE Alu 0 312 1 1029 197 0 100 chr18 34614026 34614087 -52063461 + MER8 DNA MER2_type 173 194 -45 225 0 0 0 chr18 34614087 34614112 -52063436 + (CA)n Simple_repeat Simple_repeat 2 26 0 1029 197 0 100 chr18 34614112 34614145 -52063403 + MER8 DNA MER2_type 194 229 -10 2168 119 0 0 chr18 34614502 34614805 -52062743 - AluSg SINE Alu -7 303 1 23 33 0 0 chr18 34616983 34617013 -52060535 + AT_rich Low_complexity Low_complexity 1 30 0 651 262 63 21 chr18 34617441 34617678 -52059870 - MIR SINE MIR -14 248 2 22 0 0 0 chr18 34617998 34618020 -52059528 + AT_rich Low_complexity Low_complexity 1 22 0 278 158 132 40 chr18 34618768 34618844 -52058704 + MIR SINE MIR 72 154 -108 23 68 0 0 chr18 34620345 34620389 -52057159 + AT_rich Low_complexity Low_complexity 1 44 0 575 325 45 21 chr18 34621024 34621313 -52056235 + Tigger8 DNA MER2_type 345 640 -26 24 53 0 0 chr18 34622223 34622261 -52055287 + AT_rich Low_complexity Low_complexity 1 38 0 28 29 0 0 chr18 34622326 34622361 -52055187 + AT_rich Low_complexity Low_complexity 1 35 0 374 266 9 62 chr18 34623951 34624064 -52053484 - L2 LINE L2 0 3313 3207 187 322 0 46 chr18 34625056 34625143 -52052405 + MIR SINE MIR 91 173 -89 248 328 76 8 chr18 34625748 34625879 -52051669 - MIR SINE MIR -108 154 15 1970 127 98 21 chr18 34626009 34626347 -52051201 + THE1B LTR MaLR 1 364 0 11441 89 15 0 chr18 34626347 34627903 -52049645 + THE1B-int LTR MaLR 1 1580 0 2200 114 30 22 chr18 34627903 34628264 -52049284 + THE1B LTR MaLR 1 364 0 334 344 80 36 chr18 34628368 34628705 -52048843 + MLT1J2 LTR MaLR 85 436 -14 546 234 165 16 chr18 34629203 34629391 -52048157 + MER20 DNA MER1_type 1 216 -3 357 83 0 0 chr18 34629879 34629927 -52047621 - MADE1 DNA Mariner 0 80 33 21 0 0 0 chr18 34632605 34632626 -52044922 + AT_rich Low_complexity Low_complexity 1 21 0 228 339 127 17 chr18 34632675 34632911 -52044637 + MLT1J2 LTR MaLR 69 330 -120 225 192 77 19 chr18 34632979 34633031 -52044517 + MLT1I LTR MaLR 354 408 -1 1235 173 44 20 chr18 34633476 34633725 -52043823 + AluJo SINE Alu 30 284 -28 408 202 124 31 chr18 34634231 34634360 -52043188 - MLT1A1 LTR MaLR -50 315 175 5303 49 8 14 chr18 34634438 34635554 -52041994 - SVA Other Other -954 1386 1 389 299 47 8 chr18 34636011 34636138 -52041410 + MLT1I LTR MaLR 73 204 -205 393 330 112 43 chr18 34636322 34636740 -52040808 + HAL1 LINE L1 150 596 -1911 3941 152 59 13 chr18 34636935 34637710 -52039838 + L1PB2 LINE L1 4613 5351 -800 3941 79 88 15 chr18 34637710 34638321 -52039227 + L1PB2 LINE L1 5494 6149 -2 3941 152 59 13 chr18 34638321 34638345 -52039203 + L1PB2 LINE L1 5351 6149 -2 251 119 0 24 chr18 34638349 34638391 -52039157 + AluY SINE Alu 119 159 -142 205 182 23 0 chr18 34638753 34638797 -52038751 + MIR SINE MIR 113 157 -105 290 276 0 38 chr18 34638837 34638942 -52038606 + MIR SINE MIR 154 254 -8 501 275 82 77 chr18 34638985 34639399 -52038149 + HAL1 LINE L1 1239 1654 -853 319 238 191 78 chr18 34639435 34639834 -52037714 + MLT1H LTR MaLR 106 549 0 372 300 114 18 chr18 34639838 34640058 -52037490 + HAL1 LINE L1 1677 1917 -590 228 279 45 27 chr18 34640097 34640208 -52037340 + HAL1 LINE L1 2012 2124 -383 255 23 68 0 chr18 34640210 34640254 -52037294 + (TA)n Simple_repeat Simple_repeat 2 48 0 502 304 108 41 chr18 34640591 34640979 -52036569 + L1ME4a LINE L1 5562 5975 -146 21 0 0 0 chr18 34641073 34641094 -52036454 + AT_rich Low_complexity Low_complexity 1 21 0 507 275 38 6 chr18 34641176 34641336 -52036212 + L1ME LINE L1 926 1090 -5857 361 280 18 12 chr18 34641420 34641592 -52035956 + L1ME LINE L1 1407 1705 -5242 2029 271 94 12 chr18 34641653 34642613 -52034935 + L1ME LINE L1 2960 3997 -2960 2341 79 0 3 chr18 34643155 34643458 -52034090 - AluSg SINE Alu -8 302 1 219 170 0 0 chr18 34643711 34643758 -52033790 + A-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr18 34645489 34645510 -52032038 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr18 34645553 34645604 -52031944 + AT_rich Low_complexity Low_complexity 1 51 0 298 295 13 0 chr18 34645685 34645763 -52031785 - MIR3 SINE MIR -3 205 127 932 223 20 42 chr18 34646405 34646845 -52030703 - MLT1D LTR MaLR -1 504 3 2967 26 6 0 chr18 34648772 34649119 -52028429 - L1PA4 LINE L1 -280 5875 5527 2475 33 3 0 chr18 34649119 34649415 -52028133 + L1PA4 LINE L1 5854 6153 -2 5367 123 6 4 chr18 34649504 34650316 -52027232 - L1PA14 LINE L1 -2 6159 5346 2583 190 122 36 chr18 34651138 34651173 -52026375 - Charlie1a DNA MER1_type -1312 1449 1418 2078 87 29 48 chr18 34651173 34651482 -52026066 - AluSp SINE Alu -6 307 5 2583 190 122 36 chr18 34651482 34652173 -52025375 - Charlie1a DNA MER1_type -1343 1418 660 180 77 0 0 chr18 34652252 34652278 -52025270 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 477 244 59 0 chr18 34652280 34652399 -52025149 + FLAM_A SINE Alu 1 126 -7 1194 163 20 0 chr18 34652401 34652604 -52024944 - MER2 DNA MER2_type -138 207 1 * 2424 202 47 82 chr18 34652604 34653293 -52024255 - Charlie1a DNA MER1_type -790 665 1 5666 101 25 29 chr18 34653855 34654654 -52022894 - L1PA15 LINE L1 -7 6158 5336 1944 137 0 11 chr18 34654654 34654974 -52022574 + AluSx SINE Alu 1 317 0 5666 101 25 29 chr18 34654974 34655536 -52022012 - L1PA15 LINE L1 -829 5336 4774 24 0 0 0 chr18 34655630 34655654 -52021894 + AT_rich Low_complexity Low_complexity 1 24 0 290 26 26 0 chr18 34657129 34657168 -52020380 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 104 0 0 chr18 34657691 34657768 -52019780 + AT_rich Low_complexity Low_complexity 1 77 0 1867 124 51 0 chr18 34658972 34659266 -52018282 - AluSg SINE Alu 0 310 1 22 94 0 0 chr18 34659437 34659501 -52018047 + AT_rich Low_complexity Low_complexity 1 64 0 25 51 0 0 chr18 34659557 34659596 -52017952 + AT_rich Low_complexity Low_complexity 1 39 0 1862 162 7 0 chr18 34660122 34660419 -52017129 - AluJb SINE Alu -13 299 1 260 307 50 64 chr18 34661002 34661037 -52016511 - MIR SINE MIR -122 140 106 2158 147 88 8 chr18 34661037 34661433 -52016115 - MSTA LTR MaLR 0 428 1 260 307 50 64 chr18 34661433 34661537 -52016011 - MIR SINE MIR -156 106 3 1828 88 19 88 chr18 34661939 34662247 -52015301 - AluSq SINE Alu -26 287 1 715 136 24 0 chr18 34662451 34662576 -52014972 - FLAM_A SINE Alu -5 128 1 2499 62 32 3 chr18 34664104 34664443 -52013105 + L1PA8 LINE L1 5820 6168 -4 28 0 0 0 chr18 34664443 34664471 -52013077 + AT_rich Low_complexity Low_complexity 1 28 0 815 337 134 42 chr18 34664496 34665697 -52011851 + L2 LINE L2 1518 2828 -486 207 0 0 0 chr18 34666132 34666155 -52011393 + (A)n Simple_repeat Simple_repeat 1 23 0 649 55 0 55 chr18 34666155 34666300 -52011248 + (TA)n Simple_repeat Simple_repeat 2 138 0 24 0 0 0 chr18 34670658 34670682 -52006866 + AT_rich Low_complexity Low_complexity 1 24 0 499 341 19 54 chr18 34673852 34674058 -52003490 + MLT2E LTR ERVL 3 200 -428 1852 119 102 15 chr18 34674058 34674227 -52003321 - THE1C LTR MaLR 0 375 222 402 39 0 0 chr18 34674227 34674279 -52003269 + (GA)n Simple_repeat Simple_repeat 1 52 0 1852 119 102 15 chr18 34674279 34674452 -52003096 - THE1C LTR MaLR -153 222 3 499 341 19 54 chr18 34674452 34674503 -52003045 + MLT2E LTR ERVL 200 251 -377 1005 321 63 39 chr18 34674605 34675300 -52002248 + ERVL-E LTR ERVL 810 1521 -4133 447 226 29 0 chr18 34675311 34675413 -52002135 + ERVL-E LTR ERVL 4652 4756 -1008 1514 232 123 89 chr18 34675423 34676027 -52001521 + MLT1E2 LTR MaLR 1 626 0 1726 260 64 64 chr18 34676092 34676901 -52000647 + ERVL-E LTR ERVL 4949 5757 -7 1841 295 39 29 chr18 34676905 34677522 -52000026 + MLT2E LTR ERVL 6 628 0 27 0 0 0 chr18 34678381 34678408 -51999140 + AT_rich Low_complexity Low_complexity 1 27 0 25 31 0 0 chr18 34679210 34679242 -51998306 + AT_rich Low_complexity Low_complexity 1 32 0 265 366 92 0 chr18 34679632 34679763 -51997785 - L2 LINE L2 -36 3236 3094 2547 68 0 0 chr18 34679772 34680083 -51997465 + AluSq SINE Alu 1 311 -2 2471 57 0 13 chr18 34680129 34680444 -51997104 + AluY SINE Alu 1 311 0 1148 182 182 40 chr18 34680943 34681290 -51996258 - MSTD LTR MaLR 0 396 1 198 269 32 86 chr18 34681318 34681411 -51996137 - MIR SINE MIR -1 261 174 786 196 0 0 chr18 34681932 34682065 -51995483 + AluJo SINE Alu 1 133 -169 363 60 0 0 chr18 34682075 34682125 -51995423 + (GA)n Simple_repeat Simple_repeat 2 51 0 755 214 33 33 chr18 34682125 34682307 -51995241 + AluJo SINE Alu 131 312 0 276 282 214 15 chr18 34683115 34683246 -51994302 + MER77 LTR ERV1 54 210 -395 1153 221 139 31 chr18 34683349 34683761 -51993787 + MER77 LTR ERV1 223 744 -7 1482 220 0 10 chr18 34684175 34684484 -51993064 - AluJo SINE Alu -6 306 1 221 303 2 95 chr18 34684630 34684776 -51992772 + MIR SINE MIR 43 176 -66 216 149 0 0 chr18 34685417 34685464 -51992084 + (TC)n Simple_repeat Simple_repeat 1 47 0 22 56 0 0 chr18 34685815 34685851 -51991697 + AT_rich Low_complexity Low_complexity 1 36 0 274 368 56 8 chr18 34686046 34686171 -51991377 + L2 LINE L2 3137 3267 -5 356 378 25 51 chr18 34686334 34686805 -51990743 + L2 LINE L2 431 889 -2425 191 288 55 41 chr18 34688195 34688268 -51989280 - L2 LINE L2 -5 3308 3235 759 265 185 15 chr18 34688640 34689084 -51988464 - LTR50 LTR ERVL -253 542 8 2427 62 3 3 chr18 34689269 34689573 -51987975 + AluSc SINE Alu 1 304 -5 671 290 122 37 chr18 34690727 34691074 -51986474 + L2 LINE L2 2642 3024 -289 251 224 17 0 chr18 34691096 34691154 -51986394 - MLT1J2 LTR MaLR 0 450 392 23 0 0 0 chr18 34691407 34691430 -51986118 + AT_rich Low_complexity Low_complexity 1 23 0 331 301 75 0 chr18 34691616 34691749 -51985799 - MIR SINE MIR -23 239 97 337 310 14 41 chr18 34691845 34691990 -51985558 + HAL1b LINE L1 632 772 -576 397 211 225 64 chr18 34692404 34692750 -51984798 + L1M4 LINE L1 2193 2594 -3552 1753 177 3 0 chr18 34692857 34693145 -51984403 - AluJb SINE Alu -23 289 1 327 266 146 13 chr18 34693481 34693639 -51983909 + L1M4 LINE L1 3084 3262 -2884 1226 235 69 23 chr18 34693922 34694288 -51983260 + LTR40a LTR ERVL 62 519 0 240 175 0 0 chr18 34697051 34697114 -51980434 + GA-rich Low_complexity Low_complexity 2 64 0 373 294 35 46 chr18 34697266 34697463 -51980085 - L2 LINE L2 0 3313 3119 26 74 0 0 chr18 34698207 34698261 -51979287 + AT_rich Low_complexity Low_complexity 1 54 0 308 218 200 9 chr18 34699655 34699765 -51977783 + MLT1L LTR MaLR 431 561 -54 302 316 58 19 chr18 34700207 34700362 -51977186 - MIR SINE MIR -54 208 48 242 328 139 20 chr18 34701221 34701422 -51976126 + MIR SINE MIR 20 244 -18 24 0 0 0 chr18 34702646 34702670 -51974878 + AT_rich Low_complexity Low_complexity 1 24 0 1408 186 13 50 chr18 34702956 34703257 -51974291 + AluJb SINE Alu 1 290 -12 330 345 148 7 chr18 34704197 34704507 -51973041 - L1M4 LINE L1 -2367 3779 3426 26 50 0 0 chr18 34704655 34704695 -51972853 + AT_rich Low_complexity Low_complexity 1 40 0 607 297 35 27 chr18 34704955 34705211 -51972337 + MIR SINE MIR 2 259 -3 246 275 0 0 chr18 34705285 34705354 -51972194 + L2 LINE L2 2475 2543 -771 7169 65 1 0 chr18 34705381 34706320 -51971228 - L1PA5 LINE L1 -771 5375 4436 6295 38 5 0 chr18 34706320 34707075 -51970473 + L1PA5 LINE L1 5380 6143 -11 299 247 90 11 chr18 34707723 34707812 -51969736 + MIR SINE MIR 102 197 -65 26 30 0 0 chr18 34708736 34708769 -51968779 + AT_rich Low_complexity Low_complexity 1 33 0 27 0 0 0 chr18 34709130 34709157 -51968391 + AT_rich Low_complexity Low_complexity 1 27 0 858 132 0 24 chr18 34709355 34709502 -51968046 + (TTCC)n Simple_repeat Simple_repeat 3 147 -18 1477 227 77 0 chr18 34709502 34709841 -51967707 - MLT1A1 LTR MaLR 0 365 1 858 132 0 24 chr18 34709841 34709860 -51967688 + (TTCC)n Simple_repeat Simple_repeat 147 165 0 217 192 0 39 chr18 34709847 34709925 -51967623 + T-rich Low_complexity Low_complexity 2 76 0 * 29 47 0 0 chr18 34710738 34710781 -51966767 + AT_rich Low_complexity Low_complexity 1 43 0 250 214 17 51 chr18 34712229 34712316 -51965232 + (TATAA)n Simple_repeat Simple_repeat 4 88 -28 1986 125 10 10 chr18 34712316 34712611 -51964937 - AluSx SINE Alu -17 295 1 250 214 17 51 chr18 34712611 34712640 -51964908 + (TATAA)n Simple_repeat Simple_repeat 88 116 0 2287 87 7 0 chr18 34713031 34713330 -51964218 + AluSx SINE Alu 1 301 -11 33 25 0 0 chr18 34714115 34714155 -51963393 + AT_rich Low_complexity Low_complexity 1 40 0 1069 318 47 0 chr18 34716248 34716566 -51960982 - LTR16A LTR ERVL -13 437 105 446 309 59 7 chr18 34716686 34716838 -51960710 - MIR SINE MIR -65 197 38 1099 156 10 10 chr18 34717247 34717439 -51960109 - MER47A DNA MER2_type -153 213 22 243 0 0 0 chr18 34717454 34717481 -51960067 + (TG)n Simple_repeat Simple_repeat 2 28 0 193 321 0 37 chr18 34717650 34717731 -51959817 + L2 LINE L2 3233 3310 -3 198 269 32 86 chr18 34718592 34718685 -51958863 + MIR SINE MIR 174 261 -1 1131 184 182 40 chr18 34718713 34719060 -51958488 + MSTD LTR MaLR 1 396 0 2090 98 0 19 chr18 34719559 34719875 -51957673 - AluY SINE Alu -1 310 1 1760 127 18 0 chr18 34719921 34720197 -51957351 - AluSq SINE Alu 0 313 33 868 233 70 60 chr18 34720322 34720622 -51956926 + L1MC4 LINE L1 7351 7653 -389 502 248 10 82 chr18 34720682 34720888 -51956660 + LTR41 LTR ERVL 1 191 -582 321 205 0 13 chr18 34721094 34721172 -51956376 + LTR41 LTR ERVL 584 660 -113 610 111 33 0 chr18 34721173 34721263 -51956285 - MER58B DNA MER1_type 0 341 249 265 295 11 21 chr18 34721984 34722079 -51955469 - L1ME LINE L1 -5975 95 2 348 242 75 25 chr18 34722206 34722326 -51955222 - L2 LINE L2 0 3313 3188 361 310 52 26 chr18 34722345 34722500 -51955048 - L1ME LINE L1 -420 5701 5543 210 333 72 43 chr18 34722561 34722699 -51954849 + MIR SINE MIR 120 261 -1 416 359 31 22 chr18 34722865 34723088 -51954460 - MIR SINE MIR -18 244 20 25 31 0 0 chr18 34723771 34723803 -51953745 + AT_rich Low_complexity Low_complexity 1 32 0 8208 215 25 22 chr18 34725818 34727548 -51950000 + L1M2c LINE L1 1 1736 -5053 431 240 103 86 chr18 34828500 34828675 -51848873 + MER5A DNA MER1_type 1 178 -11 2338 90 0 0 chr18 34830695 34830984 -51846564 - AluSx SINE Alu -23 289 1 30 0 0 0 chr18 34831000 34831030 -51846518 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr18 34831112 34831135 -51846413 + AT_rich Low_complexity Low_complexity 1 23 0 420 299 115 17 chr18 34831495 34831991 -51845557 - L1ME LINE L1 -437 5733 5177 241 325 119 12 chr18 34832298 34832458 -51845090 - MIR3 SINE MIR -23 185 9 6916 25 8 1 chr18 34833400 34834227 -51843321 + L1PA4 LINE L1 5321 6153 -2 27 49 0 0 chr18 34835080 34835121 -51842427 + AT_rich Low_complexity Low_complexity 1 41 0 7972 214 26 54 chr18 34835126 34837587 -51839961 - L1PA16 LINE L1 -20 6203 3675 739 169 7 22 chr18 34837587 34837723 -51839825 + AluJo SINE Alu 1 134 -178 7972 214 26 54 chr18 34837723 34838118 -51839430 - L1PA16 LINE L1 -2548 3675 3270 2239 102 0 3 chr18 34838118 34838422 -51839126 - AluSg SINE Alu -7 303 1 7972 214 26 54 chr18 34838422 34839031 -51838517 - L1PA16 LINE L1 -2953 3270 2758 751 152 23 0 chr18 34839063 34839195 -51838353 + L1PA15-16 LINE L1 2269 2403 -4446 490 175 0 29 chr18 34839198 34839301 -51838247 - AluJ/FLAM SINE Alu -212 100 1 685 163 8 0 chr18 34839305 34839428 -51838120 + L1 LINE L1 3650 3773 -2373 4627 236 49 38 chr18 34839435 34839725 -51837823 - L1PA16 LINE L1 -3456 2747 2462 210 91 0 0 chr18 34839725 34839758 -51837790 + (TATG)n Simple_repeat Simple_repeat 2 34 0 4627 236 49 38 chr18 34839758 34841407 -51836141 - L1PA16 LINE L1 -3741 2462 687 3281 106 10 4 chr18 34841416 34841899 -51835649 - L1PA11 LINE L1 -4 6170 5685 309 271 52 35 chr18 34842553 34842688 -51834860 + MIR SINE MIR 30 164 -68 11143 179 31 17 chr18 34842925 34846385 -51831163 + L1PA10 LINE L1 2666 6164 -4 3198 108 4 2 chr18 34846390 34846861 -51830687 + L1PB1 LINE L1 5317 5788 -363 260 212 15 0 chr18 34846868 34846934 -51830614 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 2502 111 5 0 chr18 34846938 34847307 -51830241 + L1PB1 LINE L1 5781 6151 0 1668 164 55 7 chr18 34847753 34847869 -51829679 + AluJo SINE Alu 6 115 -197 222 37 0 0 chr18 34847869 34847896 -51829652 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1668 164 55 7 chr18 34847896 34848072 -51829476 + AluJo SINE Alu 115 312 0 2216 105 0 7 chr18 34848164 34848470 -51829078 + AluSq SINE Alu 7 310 -3 32 26 0 0 chr18 34849542 34849581 -51827967 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr18 34849717 34849738 -51827810 + AT_rich Low_complexity Low_complexity 1 21 0 226 180 0 0 chr18 34850486 34850547 -51827001 + L1ME4a LINE L1 6061 6121 0 312 314 8 8 chr18 34850709 34850827 -51826721 + Charlie2 DNA MER1_type 236 353 -2429 451 251 132 18 chr18 34850858 34851085 -51826463 - L1MEc LINE L1 -2451 4113 3861 262 286 29 29 chr18 34851543 34851753 -51825795 - L1MEd LINE L1 -3795 2334 2125 28 29 0 0 chr18 34852073 34852108 -51825440 + AT_rich Low_complexity Low_complexity 1 35 0 1349 230 58 11 chr18 34852469 34852817 -51824731 + MLT1A1 LTR MaLR 2 365 0 380 301 113 57 chr18 34852827 34853233 -51824315 - L1MEd LINE L1 -4905 1214 786 597 255 25 5 chr18 34853541 34853745 -51823803 - L1ME LINE L1 -3571 3073 2866 26 0 0 0 chr18 34853973 34853999 -51823549 + AT_rich Low_complexity Low_complexity 1 26 0 356 320 67 53 chr18 34854051 34854426 -51823122 - L1ME LINE L1 -4304 2521 2142 3409 226 41 37 chr18 34854485 34854889 -51822659 - L1MEc LINE L1 -2886 3678 3277 189 0 0 0 chr18 34854889 34854910 -51822638 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 3409 226 41 37 chr18 34854910 34855419 -51822129 - L1MEc LINE L1 -3287 3277 2771 1939 155 3 19 chr18 34855419 34855735 -51821813 - AluSx SINE Alu -1 311 1 3409 226 41 37 chr18 34855735 34855811 -51821737 - L1MEc LINE L1 -3793 2771 2697 2695 122 82 11 chr18 34855811 34856288 -51821260 - MER9 LTR ERVK 0 511 1 3409 226 41 37 chr18 34856288 34856556 -51820992 - L1MEc LINE L1 -3867 2697 2448 2459 252 75 33 chr18 34856561 34856846 -51820702 - L1MEc LINE L1 -5193 852 580 2230 117 0 0 chr18 34856846 34857155 -51820393 + AluSc SINE Alu 1 309 0 2459 252 75 33 chr18 34857155 34857683 -51819865 - L1MEc LINE L1 -5465 580 5 373 268 130 70 chr18 34857715 34858523 -51819025 - L1ME LINE L1 -4552 2092 1231 1835 148 18 6 chr18 34858581 34858912 -51818636 - L1 LINE L1 -1197 6368 6034 21347 166 22 15 chr18 34858926 34859157 -51818391 - L1 LINE L1 -3039 4526 4298 1547 110 0 14 chr18 34859157 34859375 -51818173 - AluSg/x SINE Alu -17 293 79 21347 166 22 15 chr18 34859375 34860849 -51816699 - L1 LINE L1 -3267 4298 2836 2025 137 16 0 chr18 34860849 34861156 -51816392 + AluSx SINE Alu 1 312 0 21347 166 22 15 chr18 34861156 34863936 -51813612 - L1 LINE L1 -4729 2836 13 274 275 90 78 chr18 34864292 34864459 -51813089 - MER5A DNA MER1_type -19 170 2 1951 156 0 0 chr18 34864569 34864864 -51812684 + AluSx SINE Alu 1 295 -17 185 237 169 17 chr18 34865573 34865632 -51811916 + L2 LINE L2 3182 3249 -23 22 70 0 0 chr18 34866322 34866365 -51811183 + AT_rich Low_complexity Low_complexity 1 43 0 4189 243 67 14 chr18 34866847 34868027 -51809521 - L1ME LINE L1 -5296 1246 5 3567 246 27 18 chr18 34868036 34868713 -51808835 + L1MD2 LINE L1 5089 5775 -584 2012 124 148 19 chr18 34868713 34869092 -51808456 + MSTA LTR MaLR 1 428 0 3567 246 27 18 chr18 34869092 34869527 -51808021 + L1MD2 LINE L1 5775 6205 -154 460 304 136 23 chr18 34870135 34870740 -51806808 + L1ME3A LINE L1 3875 4547 -1599 330 302 134 69 chr18 34871174 34871764 -51805784 + L1ME3A LINE L1 5394 6005 -165 207 69 0 0 chr18 34872620 34872649 -51804899 + (CA)n Simple_repeat Simple_repeat 2 30 0 195 316 66 0 chr18 34872862 34872938 -51804610 + MIR SINE MIR 74 154 -108 990 200 19 23 chr18 34873357 34873572 -51803976 + MER20 DNA MER1_type 1 214 -5 263 352 56 32 chr18 34873940 34874065 -51803483 - MIR SINE MIR -65 143 16 584 227 57 34 chr18 34874201 34874377 -51803171 - L1ME3A LINE L1 -12 6158 5979 250 304 0 25 chr18 34874467 34874546 -51803002 + CT-rich Low_complexity Low_complexity 4 80 0 207 0 0 0 chr18 34875208 34875231 -51802317 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2128 206 42 15 chr18 34878271 34878746 -51798802 + MLT1D LTR MaLR 5 492 -13 1963 139 0 26 chr18 34878784 34879087 -51798461 + AluSx SINE Alu 1 295 -17 1548 165 168 40 chr18 34879452 34879857 -51797691 - MSTB2 LTR MaLR 0 457 1 457 268 85 60 chr18 34880045 34880280 -51797268 - MIR SINE MIR -2 260 20 336 276 37 30 chr18 34881725 34881859 -51795689 - MER110 LTR ERV1 -43 448 314 1618 192 25 17 chr18 34881860 34882219 -51795329 - L1MD2 LINE L1 -1 6358 5997 3504 228 81 57 chr18 34882307 34884102 -51793446 - L1MDb LINE L1 -4364 2042 199 1211 250 28 22 chr18 34884119 34884443 -51793105 - MLT1A2 LTR MaLR -48 326 1 746 278 12 0 chr18 34884444 34884617 -51792931 - L1MDb LINE L1 -6207 202 28 27 29 0 0 chr18 34885520 34885554 -51791994 + AT_rich Low_complexity Low_complexity 1 34 0 266 281 147 58 chr18 34885588 34885853 -51791695 + MLT1H-int LTR MaLR 1193 1366 -5 285 223 80 62 chr18 34885858 34885970 -51791578 + MLT1H LTR MaLR 1 157 -392 424 281 12 59 chr18 34886088 34886262 -51791286 - MLT1E-int LTR MaLR -1219 152 4 1274 293 82 35 chr18 34886266 34886580 -51790968 - MLT1E LTR MaLR -2 565 216 2162 123 3 0 chr18 34886580 34886888 -51790660 + AluSp SINE Alu 1 309 -4 1274 293 82 35 chr18 34886888 34887115 -51790433 - MLT1E LTR MaLR -351 216 1 357 335 24 29 chr18 34887229 34887435 -51790113 + LTR33 LTR ERVL 314 518 -3 29 47 0 0 chr18 34887750 34887793 -51789755 + AT_rich Low_complexity Low_complexity 1 43 0 834 164 0 0 chr18 34888400 34888528 -51789020 + FRAM SINE Alu 2 129 -47 23 0 0 0 chr18 34888723 34888746 -51788802 + AT_rich Low_complexity Low_complexity 1 23 0 203 206 50 44 chr18 34889132 34889292 -51788256 + (TATAA)n Simple_repeat Simple_repeat 1 161 0 247 224 193 25 chr18 34889595 34889756 -51787792 + L1M4 LINE L1 5367 5554 -630 249 33 0 0 chr18 34890144 34890174 -51787374 + (TG)n Simple_repeat Simple_repeat 1 30 0 1573 211 105 8 chr18 34890229 34890590 -51786958 + MSTD LTR MaLR 1 396 0 1027 198 0 54 chr18 34890597 34890839 -51786709 + L1PA16 LINE L1 5938 6166 0 1574 319 95 12 chr18 34891755 34892727 -51784821 - L2 LINE L2 -1 3312 2270 2389 286 128 11 chr18 34892729 34893772 -51783776 - L2 LINE L2 -1923 1391 227 276 261 261 63 chr18 34894079 34894301 -51783247 - L2 LINE L2 -3036 278 13 2135 90 3 0 chr18 34894802 34895092 -51782456 + AluSg SINE Alu 1 291 -19 1641 166 59 24 chr18 34895498 34895787 -51781761 + AluJb SINE Alu 14 312 0 828 247 155 18 chr18 34895802 34896203 -51781345 - L1ME2 LINE L1 -127 6037 5582 1602 264 116 44 chr18 34896203 34896905 -51780643 - L1MB2 LINE L1 -5 6166 5516 203 0 37 0 chr18 34896905 34896932 -51780616 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 1602 264 116 44 chr18 34896932 34897674 -51779874 - L1MB2 LINE L1 -655 5516 4829 976 42 0 0 chr18 34897674 34897794 -51779754 - L1PA5 LINE L1 -3 6151 6032 1602 264 116 44 chr18 34897794 34898342 -51779206 - L1MB2 LINE L1 -1342 4829 3172 189 220 186 85 chr18 34898345 34898463 -51779085 - MIR SINE MIR -113 149 20 215 309 82 27 chr18 34898852 34898962 -51778586 + MER5A DNA MER1_type 24 139 -50 410 197 112 51 chr18 34900060 34900238 -51777310 + MER53 DNA DNA 1 189 0 28 29 0 0 chr18 34900879 34900914 -51776634 + AT_rich Low_complexity Low_complexity 1 35 0 209 176 0 20 chr18 34902010 34902061 -51775487 + (TA)n Simple_repeat Simple_repeat 2 51 0 305 295 110 15 chr18 34902652 34902852 -51774696 + MLT1L LTR MaLR 383 601 -14 35 71 0 0 chr18 34904594 34904664 -51772884 + AT_rich Low_complexity Low_complexity 1 70 0 305 82 20 0 chr18 34905304 34905353 -51772195 + (CA)n Simple_repeat Simple_repeat 1 50 0 275 102 0 20 chr18 34905967 34906016 -51771532 + (TG)n Simple_repeat Simple_repeat 2 49 0 2164 153 104 0 chr18 34906485 34906870 -51770678 - MSTA LTR MaLR -3 425 1 307 328 40 50 chr18 34907036 34907335 -51770213 - L1MEc LINE L1 -6006 390 95 2462 171 20 2 chr18 34907455 34907912 -51769636 - L1MA9 LINE L1 -30 6282 5818 2557 194 62 23 chr18 34907944 34908476 -51769072 - MER68 LTR ERV1 -9 553 1 391 241 46 2 chr18 34908669 34908837 -51768711 - MER82 DNA MER2_type -1 652 444 348 263 118 20 chr18 34908894 34909046 -51768502 + MIR3 SINE MIR 30 196 -12 201 163 0 0 chr18 34909048 34909097 -51768451 + (TA)n Simple_repeat Simple_repeat 1 49 0 319 250 57 0 chr18 34909106 34909194 -51768354 - MER82 DNA MER2_type -560 93 1 303 335 53 11 chr18 34909386 34909685 -51767863 - L1M2 LINE L1 -992 2217 1941 311 116 0 0 chr18 34909777 34909820 -51767728 + MER58 DNA MER1_type 2355 2397 -23 380 294 20 34 chr18 34910094 34910240 -51767308 + L2 LINE L2 3158 3301 -12 1615 318 107 47 chr18 34910824 34911316 -51766232 + L2 LINE L2 1564 2025 -1289 405 0 0 0 chr18 34911316 34911361 -51766187 + (TAA)n Simple_repeat Simple_repeat 2 46 0 1615 318 107 47 chr18 34911361 34912145 -51765403 + L2 LINE L2 2025 2916 -398 2863 85 0 3 chr18 34912703 34913079 -51764469 - THE1C LTR MaLR 0 375 1 963 279 121 14 chr18 34913197 34913552 -51763996 + L2 LINE L2 2921 3313 0 31 68 0 0 chr18 34913755 34913814 -51763734 + AT_rich Low_complexity Low_complexity 1 59 0 542 323 92 9 chr18 34914933 34915150 -51762398 + MIR SINE MIR 13 247 -15 23 68 0 0 chr18 34915282 34915326 -51762222 + AT_rich Low_complexity Low_complexity 1 44 0 261 0 0 0 chr18 34916357 34916386 -51761162 + (TG)n Simple_repeat Simple_repeat 2 30 0 594 326 50 3 chr18 34917180 34917625 -51759923 + LTR33 LTR ERVL 4 497 -24 432 380 16 8 chr18 34918983 34919238 -51758310 + HERVL LTR ERVL 2952 3208 -2446 8795 245 69 31 chr18 34919790 34922420 -51755128 - L1MCa LINE L1 -895 5531 3002 5913 153 47 22 chr18 34922420 34923619 -51753929 + Tigger3b DNA MER2_type 2 1229 -2 8795 245 69 31 chr18 34923619 34923917 -51753631 - L1MCa LINE L1 -3424 3002 2717 2016 55 0 23 chr18 34923917 34924174 -51753374 + AluY SINE Alu 56 306 -5 8795 245 69 31 chr18 34924174 34924803 -51752745 - L1MCa LINE L1 -3709 2717 2113 2325 76 0 10 chr18 34924803 34925105 -51752443 + AluY SINE Alu 1 299 -12 8795 245 69 31 chr18 34925105 34925996 -51751552 - L1MCa LINE L1 -4313 2113 814 375 191 34 0 chr18 34926025 34926114 -51751434 - L1MCa LINE L1 -6232 194 103 589 302 28 0 chr18 34926161 34926340 -51751208 + LTR33 LTR ERVL 335 518 -3 309 326 82 7 chr18 34926495 34926630 -51750918 + MIR SINE MIR 7 151 -111 312 315 0 0 chr18 34926920 34926945 -51750603 - L1MC4 LINE L1 -1336 6706 6682 243 0 0 0 chr18 34926945 34926972 -51750576 + (GA)n Simple_repeat Simple_repeat 2 28 0 312 315 0 0 chr18 34926972 34927038 -51750510 - L1MC4 LINE L1 -1359 6683 6615 347 323 149 2 chr18 34929128 34929359 -51748189 - L1MDa LINE L1 -4509 1917 1511 1054 231 77 93 chr18 34929408 34929943 -51747605 - MER39 LTR ERV1 0 707 1 2065 233 40 43 chr18 34930109 34930289 -51747259 - MLT1E3 LTR MaLR 0 624 445 1994 149 3 7 chr18 34930289 34930591 -51746957 - AluSx SINE Alu -11 301 1 2065 233 40 43 chr18 34930591 34931036 -51746512 - MLT1E3 LTR MaLR -179 445 1 635 111 14 104 chr18 34931770 34931914 -51745634 - FRAM SINE Alu -45 131 1 22 0 0 0 chr18 34932437 34932459 -51745089 + GC_rich Low_complexity Low_complexity 1 22 0 251 318 60 46 chr18 34933324 34933475 -51744073 - MIR3 SINE MIR -26 182 30 335 59 0 20 chr18 34934771 34934822 -51742726 + (TG)n Simple_repeat Simple_repeat 1 50 0 1852 201 37 2 chr18 34934879 34935314 -51742234 - MER89 LTR ERV1 -4 555 6 547 360 16 14 chr18 34935435 34935678 -51741870 - MIR SINE MIR -3 259 21 253 356 198 16 chr18 34936832 34937604 -51739944 + L2 LINE L2 1663 2575 -739 181 159 32 0 chr18 34937617 34937680 -51739868 + (TTA)n Simple_repeat Simple_repeat 3 67 0 534 238 244 0 chr18 34937983 34938151 -51739397 + MER3 DNA MER1_type 1 209 0 229 225 175 12 chr18 34938301 34938381 -51739167 - L2 LINE L2 -4 3309 3217 26 0 0 0 chr18 34939157 34939183 -51738365 + AT_rich Low_complexity Low_complexity 1 26 0 216 0 0 0 chr18 34939550 34939574 -51737974 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 0 0 0 chr18 34939980 34940001 -51737547 + AT_rich Low_complexity Low_complexity 1 21 0 366 23 0 0 chr18 34940844 34940887 -51736661 + (TG)n Simple_repeat Simple_repeat 1 43 0 216 0 0 0 chr18 34942151 34942175 -51735373 + (A)n Simple_repeat Simple_repeat 1 24 0 2349 62 0 10 chr18 34942271 34942576 -51734972 - AluY SINE Alu -9 302 1 339 284 148 58 chr18 34942646 34943004 -51734544 - MLT1J2 LTR MaLR -37 409 1 459 186 0 0 chr18 34943974 34944071 -51733477 + CT-rich Low_complexity Low_complexity 1 97 0 2242 73 3 3 chr18 34944607 34944893 -51732655 - AluSc SINE Alu 0 309 24 259 264 66 9 chr18 34944893 34944999 -51732549 + MIR SINE MIR 34 145 -117 217 339 87 8 chr18 34945092 34945219 -51732329 + L2 LINE L2 3167 3303 -10 25 31 0 0 chr18 34946512 34946544 -51731004 + AT_rich Low_complexity Low_complexity 1 32 0 561 110 0 0 chr18 34947158 34947240 -51730308 + AluY SINE Alu 1 82 -229 204 389 0 0 chr18 34947272 34947362 -51730186 - L3 LINE CR1 -73 1504 1415 813 98 0 16 chr18 34948422 34948544 -51729004 - L1PA8 LINE L1 -9 6163 6044 3130 128 105 26 chr18 34948590 34949159 -51728389 - LTR18B LTR ERVL 0 614 1 397 345 93 12 chr18 34949931 34950136 -51727412 + L1ME3 LINE L1 5647 5867 -295 676 184 50 96 chr18 34950836 34951054 -51726494 - MER3 DNA MER1_type -1 208 1 599 230 0 24 chr18 34951931 34952057 -51725491 + MER63 DNA MER1_type 3 751 -85 270 157 0 39 chr18 34952063 34952107 -51725441 + MER63 DNA MER1_type 982 1023 -37 327 123 46 46 chr18 34952107 34952172 -51725376 - LTR40a LTR ERVL 0 519 455 397 326 87 5 chr18 34952329 34952525 -51725023 + L2 LINE L2 2889 3100 -213 566 218 35 0 chr18 34952525 34952695 -51724853 - L1M4 LINE L1 -3147 3497 3322 8656 162 45 48 chr18 34952731 34952883 -51724665 - L1PA15 LINE L1 0 6165 6014 1844 149 7 3 chr18 34952883 34953171 -51724377 + AluSx SINE Alu 1 289 -23 8656 162 45 48 chr18 34953171 34955762 -51721786 - L1PA15 LINE L1 -151 6014 3422 2707 186 38 101 chr18 34955761 34955973 -51721575 - L1MD2 LINE L1 -10 6232 6008 * 315 0 0 0 chr18 34955973 34956008 -51721540 + (TG)n Simple_repeat Simple_repeat 2 36 0 2707 186 38 101 chr18 34956008 34956666 -51720882 - L1MD2 LINE L1 -234 6008 5417 2918 224 81 43 chr18 34956673 34957096 -51720452 - L1MDa LINE L1 -5675 865 460 2370 73 0 0 chr18 34957096 34957398 -51720150 - AluY SINE Alu -9 302 1 2918 224 81 43 chr18 34957398 34957791 -51719757 - L1MDa LINE L1 -6080 460 18 7216 44 0 0 chr18 34957837 34959179 -51718369 - L1PA5 LINE L1 -5 6149 4806 263 292 9 9 chr18 34959228 34959341 -51718207 - L1M4 LINE L1 -5243 1403 1291 23 0 0 0 chr18 34959348 34959371 -51718177 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr18 34960054 34960076 -51717472 + AT_rich Low_complexity Low_complexity 1 22 0 1167 249 94 26 chr18 34960509 34961038 -51716510 + L1MC5 LINE L1 7343 7907 -54 22 88 0 0 chr18 34961361 34961418 -51716130 + AT_rich Low_complexity Low_complexity 1 57 0 334 158 347 11 chr18 34961774 34961869 -51715679 - MER63A DNA MER1_type 0 210 84 29 70 0 0 chr18 34961922 34961979 -51715569 + AT_rich Low_complexity Low_complexity 1 57 0 963 241 5 5 chr18 34962071 34962283 -51715265 + MER58C DNA MER1_type 1 212 -3 691 294 198 24 chr18 34962285 34962330 -51715218 - Charlie8 DNA MER1_type -325 2092 2056 1407 226 51 88 chr18 34962330 34962900 -51714648 - MLT1H LTR MaLR 0 549 1 691 294 198 24 chr18 34962900 34963405 -51714143 - Charlie8 DNA MER1_type -361 2056 1446 769 295 100 22 chr18 34963959 34964160 -51713388 - Charlie8 DNA MER1_type -1252 1165 981 1578 169 48 7 chr18 34964160 34964455 -51713093 + AluJb SINE Alu 1 307 -5 769 295 100 22 chr18 34964455 34964745 -51712803 - Charlie8 DNA MER1_type -1436 981 636 26 30 0 0 chr18 34965001 34965034 -51712514 + AT_rich Low_complexity Low_complexity 1 33 0 406 287 97 52 chr18 34965350 34966255 -51711293 - L1MCa LINE L1 -2211 4215 3270 384 291 117 47 chr18 34966875 34967260 -51710288 - L1MCa LINE L1 -3478 2948 2537 22 0 0 0 chr18 34967964 34967986 -51709562 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr18 34968252 34968291 -51709257 + AT_rich Low_complexity Low_complexity 1 39 0 2988 220 18 20 chr18 34968423 34969155 -51708393 - L1MB7 LINE L1 -19 6165 5436 1028 172 82 20 chr18 34969168 34969412 -51708136 - L1MC2 LINE L1 -9 6335 6077 1118 244 164 41 chr18 34969416 34969957 -51707591 - L1MCa LINE L1 -5774 652 45 1639 241 58 24 chr18 34970002 34970467 -51707081 - L1M4 LINE L1 -5414 1128 648 261 351 38 23 chr18 34970536 34970667 -51706881 - MER5B DNA MER1_type 0 178 46 550 235 0 8 chr18 34970680 34970799 -51706749 + FLAM_A SINE Alu 1 118 -15 759 289 61 11 chr18 34971008 34971271 -51706277 - L1M4 LINE L1 -6157 385 110 477 320 95 34 chr18 34971755 34972891 -51704657 - L1MB7 LINE L1 -867 5279 4075 389 308 139 24 chr18 34972934 34973810 -51703738 - L1MB7 LINE L1 -2315 3831 2855 377 294 78 31 chr18 34973853 34974108 -51703440 - L1MB7 LINE L1 -3675 2471 2205 2280 102 0 7 chr18 34974265 34974569 -51702979 - AluSq SINE Alu -11 302 1 27 0 0 0 chr18 34974574 34974601 -51702947 + AT_rich Low_complexity Low_complexity 1 27 0 396 216 0 21 chr18 34974932 34975029 -51702519 - L1M4 LINE L1 -1163 4983 4889 5529 186 72 31 chr18 34975065 34976559 -51700989 - L1MDa LINE L1 -4071 2469 915 753 127 52 0 chr18 34976643 34976777 -51700771 + L1MDa LINE L1 2207 2347 -4193 2421 247 59 75 chr18 34976779 34977182 -51700366 - L1MDa LINE L1 -5546 994 586 2279 97 0 3 chr18 34977182 34977481 -51700067 + AluSg SINE Alu 1 298 -12 2421 247 59 75 chr18 34977481 34977920 -51699628 - L1MDa LINE L1 -5954 586 15 523 288 44 70 chr18 34978047 34978188 -51699360 - MIR SINE MIR 0 262 119 1618 151 0 60 chr18 34978188 34978486 -51699062 + AluSx SINE Alu 1 280 -32 213 39 0 0 chr18 34978486 34978512 -51699036 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 523 288 44 70 chr18 34978512 34978598 -51698950 - MIR SINE MIR -141 121 40 361 302 128 43 chr18 34979401 34979659 -51697889 + Charlie7 DNA MER1_type 5 284 -2328 1868 241 61 70 chr18 34979705 34980643 -51696905 + Charlie7 DNA MER1_type 1485 2413 -199 2098 81 10 52 chr18 34980665 34980973 -51696575 - AluSx SINE Alu -13 299 5 22 70 0 0 chr18 34981003 34981046 -51696502 + AT_rich Low_complexity Low_complexity 1 43 0 5695 187 47 43 chr18 34982676 34982919 -51694629 + L1MC3 LINE L1 6382 6622 -1163 6966 136 17 23 chr18 34982919 34984157 -51693391 + Tigger3b DNA MER2_type 2 1231 0 5695 187 47 43 chr18 34984157 34984510 -51693038 + L1MC3 LINE L1 6622 6972 -813 2193 126 7 0 chr18 34984510 34984811 -51692737 + AluSq SINE Alu 3 305 -8 5695 187 47 43 chr18 34984811 34985610 -51691938 + L1MC3 LINE L1 6972 7784 -1 397 247 54 0 chr18 34985933 34986026 -51691522 + MIR SINE MIR 58 155 -107 2048 126 143 11 chr18 34986026 34986398 -51691150 - MER61C LTR ERV1 0 434 14 405 143 0 0 chr18 34986416 34986479 -51691069 - MER61C-int LTR ERV1 0 5217 5155 24386 115 21 14 chr18 34986511 34989365 -51688183 - MER61C-int LTR ERV1 -35 5182 2294 2679 20 20 0 chr18 34989365 34989669 -51687879 + AluYa5 SINE Alu 1 310 -1 24386 115 21 14 chr18 34989669 34990610 -51686938 - MER61C-int LTR ERV1 -2923 2294 1361 1754 104 42 0 chr18 34990605 34990864 -51686684 - MER61C-int LTR ERV1 -4004 1213 944 * 2396 126 18 23 chr18 34990864 34991262 -51686286 - MER61C-int LTR ERV1 -4377 840 445 1954 85 9 109 chr18 34991262 34991592 -51685956 + AluSg SINE Alu 1 297 -13 311 222 83 28 chr18 34991636 34991744 -51685804 - MER61C-int LTR ERV1 -6336 755 642 680 161 39 58 chr18 34991780 34991935 -51685613 - MER61C-int LTR ERV1 -5064 153 2 1894 182 78 12 chr18 34991935 34992347 -51685201 - MER61C LTR ERV1 0 434 7 232 337 109 0 chr18 34992347 34992448 -51685100 + MIR SINE MIR 151 262 0 203 308 46 0 chr18 34992982 34993047 -51684501 - L2 LINE L2 -36 3236 3169 450 317 22 22 chr18 34993096 34993367 -51684181 + L1ME1 LINE L1 1300 1570 -4814 2174 258 12 30 chr18 34993427 34994172 -51683376 + L1ME1 LINE L1 4862 5593 -789 1103 225 95 3 chr18 34994214 34994530 -51683018 + L1ME1 LINE L1 5809 6153 -249 263 293 43 30 chr18 34994535 34994699 -51682849 + L1MB8 LINE L1 5992 6157 -21 2337 81 0 7 chr18 34994731 34995027 -51682521 - AluY SINE Alu -17 294 1 2913 271 87 29 chr18 34995167 34995559 -51681989 + L1ME2 LINE L1 3516 3884 -2262 1889 97 41 15 chr18 34995559 34995826 -51681722 + AluY SINE Alu 23 296 -15 2913 271 87 29 chr18 34995826 34996982 -51680566 + L1ME2 LINE L1 3884 5164 -982 180 0 0 0 chr18 34996982 34997002 -51680546 + (TA)n Simple_repeat Simple_repeat 2 21 0 2913 271 87 29 chr18 34997002 34997066 -51680482 + L1ME2 LINE L1 5164 5223 -923 890 236 9 9 chr18 34997074 34997290 -51680258 + L1ME2 LINE L1 5937 6152 -12 2351 78 7 0 chr18 34999521 34999829 -51677719 + AluY SINE Alu 1 310 -1 258 315 8 71 chr18 35000077 35000204 -51677344 - L2 LINE L2 -5 3308 3190 184 304 89 27 chr18 35002552 35002664 -51674884 + MIR SINE MIR 88 206 -56 21 0 0 0 chr18 35002957 35002978 -51674570 + AT_rich Low_complexity Low_complexity 1 21 0 201 279 35 0 chr18 35003514 35003600 -51673948 + (CG)n Simple_repeat Simple_repeat 2 90 0 402 21 0 0 chr18 35003859 35003906 -51673642 + (CCG)n Simple_repeat Simple_repeat 2 48 0 37 52 0 0 chr18 35004105 35004163 -51673385 + GC_rich Low_complexity Low_complexity 1 58 0 219 171 24 0 chr18 35004996 35005037 -51672511 + CT-rich Low_complexity Low_complexity 2 43 0 25 0 0 0 chr18 35005880 35005905 -51671643 + AT_rich Low_complexity Low_complexity 1 25 0 264 30 0 0 chr18 35006869 35006902 -51670646 + (TG)n Simple_repeat Simple_repeat 1 33 0 315 0 0 0 chr18 35008107 35008142 -51669406 + (TG)n Simple_repeat Simple_repeat 2 36 0 236 298 89 0 chr18 35009488 35009612 -51667936 - L2 LINE L2 -223 3049 2915 209 302 16 0 chr18 35010208 35010271 -51667277 + (TATATG)n Simple_repeat Simple_repeat 6 69 0 285 128 0 0 chr18 35010271 35010318 -51667230 + (TG)n Simple_repeat Simple_repeat 2 48 0 259 263 0 0 chr18 35010478 35010535 -51667013 + CT-rich Low_complexity Low_complexity 2 58 0 21 0 0 0 chr18 35011905 35011926 -51665622 + AT_rich Low_complexity Low_complexity 1 21 0 301 281 23 70 chr18 35012808 35012936 -51664612 - L1M4c LINE L1 -4567 1859 1738 236 115 77 19 chr18 35012942 35012994 -51664554 - L1MD2 LINE L1 -4 6355 6301 235 239 91 34 chr18 35013219 35013307 -51664241 - L1M4c LINE L1 -882 1905 1624 302 324 102 74 chr18 35013690 35014122 -51663426 - LTR67 LTR ERVL -2 555 112 533 291 57 9 chr18 35014506 35014716 -51662832 + MIR SINE MIR 36 255 -7 333 356 20 0 chr18 35015205 35015354 -51662194 - MIR SINE MIR 0 262 111 508 283 79 89 chr18 35015356 35015671 -51661877 - MLT1K LTR MaLR 0 588 277 26 0 0 0 chr18 35016030 35016056 -51661492 + AT_rich Low_complexity Low_complexity 1 26 0 2271 78 0 0 chr18 35017039 35017321 -51660227 - AluY SINE Alu -9 302 21 383 192 40 20 chr18 35017980 35018079 -51659469 + MLT1I LTR MaLR 305 405 -4 206 88 59 0 chr18 35018610 35018644 -51658904 + CT-rich Low_complexity Low_complexity 4 39 0 207 0 0 0 chr18 35018659 35018682 -51658866 + (T)n Simple_repeat Simple_repeat 1 23 0 783 158 38 15 chr18 35020142 35020275 -51657273 - AluSq/x SINE Alu -177 136 1 192 77 0 0 chr18 35022206 35022232 -51655316 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1787 156 11 7 chr18 35022232 35022515 -51655033 - AluJb SINE Alu -28 284 1 253 240 58 39 chr18 35022712 35022866 -51654682 - L1ME LINE L1 -212 5909 5753 374 258 65 137 chr18 35023057 35023305 -51654243 + MIR SINE MIR 2 231 -31 685 256 34 52 chr18 35024205 35024439 -51653109 + MIR SINE MIR 11 240 -22 * 1138 363 57 14 chr18 35024424 35025044 -51652504 + L3 LINE CR1 170 815 -762 456 289 108 95 chr18 35025283 35025608 -51651940 + L3 LINE CR1 903 1231 -346 208 327 53 35 chr18 35025755 35025868 -51651680 + L3 LINE CR1 1307 1421 -156 370 301 153 59 chr18 35026688 35026924 -51650624 - MIR SINE MIR 0 262 5 1621 178 3 40 chr18 35027197 35027500 -51650048 - AluJo SINE Alu -18 294 3 785 128 30 30 chr18 35027561 35027694 -51649854 + MER1B DNA MER1_type 206 338 -1 185 311 33 0 chr18 35027987 35028048 -51649500 + MIR SINE MIR 194 256 -6 216 289 180 62 chr18 35028097 35028225 -51649323 + MIR SINE MIR 61 203 -59 1725 190 14 6 chr18 35033545 35033893 -51643655 - L1MB7 LINE L1 -42 6142 5792 9650 151 26 9 chr18 35038840 35039038 -51638510 - Tigger1 DNA MER2_type 0 2418 2225 1504 196 3 24 chr18 35039038 35039329 -51638219 + AluJo SINE Alu 2 286 -26 9650 151 26 9 chr18 35039329 35040758 -51636790 - Tigger1 DNA MER2_type -193 2225 764 1703 157 20 7 chr18 35040758 35041052 -51636496 - Tigger1 DNA MER2_type -2119 299 2 315 49 0 0 chr18 35041789 35041830 -51635718 + (TG)n Simple_repeat Simple_repeat 2 42 0 1515 208 8 63 chr18 35042001 35042396 -51635152 - MLT1A2 LTR MaLR 0 374 2 1940 145 3 0 chr18 35042612 35042908 -51634640 + AluSx SINE Alu 3 299 -13 228 343 57 9 chr18 35043994 35044099 -51633449 - L2 LINE L2 -5 3267 3158 521 277 116 13 chr18 35044399 35044623 -51632925 - MIR SINE MIR 0 262 16 280 315 11 11 chr18 35046525 35046614 -51630934 - MIR3 SINE MIR -27 181 93 407 86 0 0 chr18 35046809 35046867 -51630681 - MADE1 DNA Mariner -22 58 1 21 0 0 0 chr18 35047370 35047391 -51630157 + AT_rich Low_complexity Low_complexity 1 21 0 583 293 58 26 chr18 35047924 35048332 -51629216 - MLT1J LTR MaLR -41 470 3 256 329 53 53 chr18 35048764 35048942 -51628606 + MIR SINE MIR 29 211 -51 1540 211 3 7 chr18 35049276 35049580 -51627968 + AluJo SINE Alu 1 303 -9 199 382 142 38 chr18 35050483 35050695 -51626853 + L2 LINE L2 3034 3267 -5 589 278 31 15 chr18 35053448 35053659 -51623889 - MIR SINE MIR -6 256 44 27 49 0 0 chr18 35055240 35055281 -51622267 + AT_rich Low_complexity Low_complexity 1 41 0 277 287 81 76 chr18 35056823 35057046 -51620502 + L1ME LINE L1 5527 5750 -412 648 264 35 17 chr18 35057057 35057231 -51620317 - MER5B DNA MER1_type 0 178 2 26 0 0 0 chr18 35057330 35057356 -51620192 + AT_rich Low_complexity Low_complexity 1 26 0 233 324 62 27 chr18 35058559 35058784 -51618764 + L1ME LINE L1 5561 5793 -328 2158 100 3 13 chr18 35058965 35059264 -51618284 + AluSc SINE Alu 6 301 -8 469 297 68 27 chr18 35059894 35060156 -51617392 - L1MC/D LINE L1 -476 5686 5465 303 218 35 11 chr18 35060793 35060880 -51616668 - MLT1K LTR MaLR -162 426 338 456 77 0 0 chr18 35061704 35061769 -51615779 + (CAA)n Simple_repeat Simple_repeat 1 65 0 1248 153 53 18 chr18 35062140 35062368 -51615180 - MER46A DNA MER2_type 0 236 1 24 32 0 0 chr18 35063006 35063037 -51614511 + AT_rich Low_complexity Low_complexity 1 31 0 209 154 0 77 chr18 35063384 35063436 -51614112 + L2 LINE L2 3266 3313 0 316 170 30 30 chr18 35063504 35063639 -51613909 + (TA)n Simple_repeat Simple_repeat 2 136 0 689 205 0 0 chr18 35063639 35063761 -51613787 - FLAM_C SINE Alu -21 122 1 497 307 142 5 chr18 35064026 35064244 -51613304 + MIR SINE MIR 11 258 -4 25 31 0 0 chr18 35064398 35064430 -51613118 + AT_rich Low_complexity Low_complexity 1 32 0 756 271 61 13 chr18 35064538 35064767 -51612781 - MIR SINE MIR -3 259 20 230 164 33 16 chr18 35065637 35065698 -51611850 + (TA)n Simple_repeat Simple_repeat 1 62 0 24 32 0 0 chr18 35066169 35066200 -51611348 + AT_rich Low_complexity Low_complexity 1 31 0 23 92 0 0 chr18 35066369 35066434 -51611114 + AT_rich Low_complexity Low_complexity 1 65 0 21 0 0 0 chr18 35067546 35067567 -51609981 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr18 35068398 35068426 -51609122 + AT_rich Low_complexity Low_complexity 1 28 0 30 0 0 0 chr18 35070176 35070206 -51607342 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr18 35070934 35070962 -51606586 + AT_rich Low_complexity Low_complexity 1 28 0 5967 282 92 42 chr18 35073068 35076003 -51601545 - L2 LINE L2 -10 3303 218 216 231 0 46 chr18 35076816 35076881 -51600667 + GA-rich Low_complexity Low_complexity 5 66 0 313 358 66 36 chr18 35079031 35079333 -51598215 - L3b LINE CR1 -19 1564 1254 283 273 11 23 chr18 35081390 35081478 -51596070 + L2 LINE L2 3225 3311 -2 21 0 0 0 chr18 35081985 35082006 -51595542 + AT_rich Low_complexity Low_complexity 1 21 0 509 263 116 49 chr18 35085451 35085675 -51591873 + MIR SINE MIR 3 241 -21 248 317 96 10 chr18 35086750 35086854 -51590694 - MIR SINE MIR -79 183 71 564 285 55 10 chr18 35087708 35087908 -51589640 + MIR SINE MIR 28 236 -26 210 265 24 12 chr18 35089315 35089398 -51588150 + (TATATG)n Simple_repeat Simple_repeat 3 86 0 642 294 43 9 chr18 35089485 35089696 -51587852 - MIR SINE MIR -36 226 9 196 354 15 0 chr18 35089788 35089853 -51587695 + MIR SINE MIR 2 67 -195 263 241 17 0 chr18 35091762 35091820 -51585728 - MER91 DNA MER1_type 0 190 132 281 281 106 60 chr18 35092997 35093214 -51584334 + L2 LINE L2 2973 3199 -114 1916 141 0 7 chr18 35093564 35093854 -51583694 + AluSx SINE Alu 23 310 -2 194 0 39 0 chr18 35094294 35094320 -51583228 + (CA)n Simple_repeat Simple_repeat 2 28 0 2073 93 42 0 chr18 35098772 35099061 -51578487 - AluSq SINE Alu -12 301 1 350 355 112 15 chr18 35099380 35099577 -51577971 - MIR SINE MIR -23 239 24 2409 61 0 3 chr18 35100021 35100316 -51577232 - AluY SINE Alu -17 294 1 186 343 93 29 chr18 35100391 35100531 -51577017 + L2 LINE L2 3122 3270 -2 2427 62 7 0 chr18 35101342 35101646 -51575902 + AluY SINE Alu 1 306 -5 190 286 127 63 chr18 35102353 35102479 -51575069 + L2 LINE L2 3176 3309 -4 301 248 85 46 chr18 35102608 35102761 -51574787 - HAL1b LINE L1 -1 1347 1189 31 88 0 0 chr18 35102786 35102866 -51574682 + AT_rich Low_complexity Low_complexity 1 80 0 602 263 141 13 chr18 35102867 35103179 -51574369 - HAL1b LINE L1 -336 1012 661 1225 232 47 11 chr18 35103301 35103461 -51574087 - AluJo SINE Alu -25 287 111 368 20 20 0 chr18 35103461 35103510 -51574038 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 1225 232 47 11 chr18 35103510 35103625 -51573923 - AluJo SINE Alu -201 111 2 282 296 15 69 chr18 35106012 35106347 -51571201 - L1MEd LINE L1 -3667 2548 2232 401 278 122 112 chr18 35106860 35107440 -51570108 - L1MEd LINE L1 -915 1661 932 919 283 5 0 chr18 35107476 35107699 -51569849 - MER58A DNA MER1_type 0 224 1 257 315 68 7 chr18 35107780 35107926 -51569622 - L1MEd LINE L1 -5357 848 694 1370 194 24 34 chr18 35107952 35108245 -51569303 - AluJb SINE Alu -17 295 6 295 347 24 36 chr18 35110446 35110613 -51566935 - L2 LINE L2 -536 2778 2614 210 313 10 73 chr18 35110909 35110967 -51566581 + L2 LINE L2 3183 3234 -38 2272 170 41 5 chr18 35110967 35111378 -51566170 - MSTB LTR MaLR 0 426 1 210 313 10 73 chr18 35111378 35111415 -51566133 + L2 LINE L2 3234 3272 0 267 388 46 5 chr18 35112300 35112496 -51565052 - L2 LINE L2 -632 2682 2479 236 297 0 11 chr18 35113205 35113296 -51564252 - MLT1L LTR MaLR -23 592 503 394 306 31 25 chr18 35113476 35113636 -51563912 - MLT1K LTR MaLR -317 271 111 2054 119 10 3 chr18 35114389 35114692 -51562856 - AluSx SINE Alu -7 305 1 2368 220 161 97 chr18 35114697 35115413 -51562135 - L1MC4 LINE L1 -208 7834 7165 579 183 8 48 chr18 35115413 35115561 -51561987 - FLAM_C SINE Alu 0 143 1 2368 220 161 97 chr18 35115561 35116142 -51561406 - L1MC4 LINE L1 -877 7165 6443 486 344 45 50 chr18 35116923 35117260 -51560288 - L2 LINE L2 0 3272 2938 286 332 84 26 chr18 35117280 35117470 -51560078 - MIR SINE MIR -42 220 20 500 273 190 35 chr18 35117746 35118146 -51559402 + L2 LINE L2 2850 3311 -2 808 206 32 7 chr18 35118247 35118529 -51559019 - MLT1B LTR MaLR 0 390 4 21 0 0 0 chr18 35120852 35120873 -51556675 + AT_rich Low_complexity Low_complexity 1 21 0 362 361 8 8 chr18 35122642 35122775 -51554773 - L2 LINE L2 -4 3309 3177 769 260 151 35 chr18 35122865 35123120 -51554428 - L1MEd LINE L1 -5673 723 408 759 184 0 0 chr18 35123120 35123245 -51554303 + FLAM_C SINE Alu 1 125 -8 769 260 151 35 chr18 35123245 35123366 -51554182 - L1MEd LINE L1 -5988 408 303 521 319 102 58 chr18 35123384 35123435 -51554113 - L2 LINE L2 -882 2432 2385 1326 246 8 32 chr18 35123435 35123809 -51553739 + MLT1A1 LTR MaLR 1 365 0 521 319 102 58 chr18 35123809 35124190 -51553358 - L2 LINE L2 -929 2385 1981 1319 227 119 54 chr18 35124273 35124886 -51552662 + L1M4b LINE L1 1105 1753 -5102 477 290 19 13 chr18 35124888 35125043 -51552505 - L2 LINE L2 -1350 1964 1809 26 50 0 0 chr18 35125257 35125297 -51552251 + AT_rich Low_complexity Low_complexity 1 40 0 305 297 67 107 chr18 35125368 35125977 -51551571 - L2 LINE L2 -1429 1885 1301 21 0 0 0 chr18 35126580 35126601 -51550947 + AT_rich Low_complexity Low_complexity 1 21 0 1399 242 88 36 chr18 35126618 35127931 -51549617 - L1M4 LINE L1 -1422 5535 1105 4083 230 67 38 chr18 35128294 35129361 -51548187 - L1M4 LINE L1 -5759 1100 4 22 35 0 0 chr18 35130492 35130521 -51547027 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr18 35130914 35130937 -51546611 + AT_rich Low_complexity Low_complexity 1 23 0 928 229 172 32 chr18 35131143 35131559 -51545989 - L1ME3A LINE L1 -9 6161 5694 1984 288 133 17 chr18 35131695 35133681 -51543867 - L1ME3A LINE L1 -461 5709 3474 471 243 93 7 chr18 35133743 35133883 -51543665 - L1MA10 LINE L1 -8 6326 6175 680 208 10 81 chr18 35133953 35134150 -51543398 - MER20 DNA MER1_type -29 190 8 21 57 0 0 chr18 35134227 35134262 -51543286 + AT_rich Low_complexity Low_complexity 1 35 0 2332 213 103 54 chr18 35134397 35135162 -51542386 + L1ME3A LINE L1 5360 6162 -8 2222 93 0 17 chr18 35135372 35135663 -51541885 + AluSp SINE Alu 1 306 0 181 0 0 0 chr18 35135663 35135683 -51541865 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 198 171 0 0 chr18 35138096 35138137 -51539411 + (TATG)n Simple_repeat Simple_repeat 2 42 0 347 272 56 62 chr18 35138427 35138622 -51538926 - MLT1J LTR MaLR -317 194 1 2047 110 26 19 chr18 35138643 35138953 -51538595 - AluSx SINE Alu 0 312 1 669 314 98 32 chr18 35138999 35139528 -51538020 - MER20B DNA MER1_type -164 619 56 324 291 55 39 chr18 35140177 35140359 -51537189 - Charlie7 DNA MER1_type -2104 508 324 280 233 35 0 chr18 35141710 35141796 -51535752 - MER103 DNA DNA -69 97 9 303 351 42 30 chr18 35142795 35143023 -51534525 - MIR SINE MIR -13 249 19 1090 257 148 50 chr18 35143778 35144318 -51533230 - MLT1E LTR MaLR 0 593 1 382 282 69 8 chr18 35144351 35144482 -51533066 - MIR SINE MIR -15 247 109 213 269 58 19 chr18 35144811 35144863 -51532685 + L2 LINE L2 3169 3222 -50 2040 182 11 3 chr18 35144976 35145338 -51532210 + MLT1A1 LTR MaLR 1 365 0 273 151 38 19 chr18 35145644 35145697 -51531851 + L2 LINE L2 3219 3272 0 198 191 0 0 chr18 35146775 35146817 -51530731 + (TA)n Simple_repeat Simple_repeat 1 42 0 275 261 33 0 chr18 35146823 35146915 -51530633 + (TATATG)n Simple_repeat Simple_repeat 2 96 0 14420 137 21 18 chr18 35147143 35149554 -51527994 + Tigger1 DNA MER2_type 1 2418 0 28 0 0 0 chr18 35149618 35149646 -51527902 + AT_rich Low_complexity Low_complexity 1 28 0 355 392 66 25 chr18 35150733 35151442 -51526106 + L2 LINE L2 1957 2694 -620 1276 276 125 38 chr18 35151502 35151790 -51525758 + L2 LINE L2 2375 2636 -677 1139 189 48 26 chr18 35151790 35152103 -51525445 + MER33 DNA MER1_type 1 320 -4 1276 276 125 38 chr18 35152103 35152491 -51525057 + L2 LINE L2 2636 3097 -216 23 54 0 0 chr18 35153295 35153332 -51524216 + AT_rich Low_complexity Low_complexity 1 37 0 239 359 70 19 chr18 35153683 35153839 -51523709 + L2 LINE L2 259 422 -2892 189 299 82 21 chr18 35154155 35154252 -51523296 + L2 LINE L2 2607 2709 -605 374 358 41 31 chr18 35155247 35155479 -51522069 - MERVL LTR ERVL -362 5123 4884 1099 186 19 0 chr18 35155479 35155694 -51521854 + MER20 DNA MER1_type 1 219 0 374 358 41 31 chr18 35155694 35155875 -51521673 - MERVL LTR ERVL -601 4884 4706 253 229 0 125 chr18 35156127 35156223 -51521325 + L2 LINE L2 3229 3312 -1 244 274 0 0 chr18 35157211 35157262 -51520286 + polypyrimidine Low_complexity Low_complexity 5 55 0 1639 172 7 29 chr18 35157970 35158278 -51519270 + AluJb SINE Alu 1 301 -11 198 388 0 12 chr18 35159217 35159297 -51518251 + L2 LINE L2 3005 3083 -189 339 235 59 10 chr18 35160936 35161038 -51516510 + MER5A DNA MER1_type 83 189 0 282 364 27 0 chr18 35161194 35161304 -51516244 - L2 LINE L2 -1 3312 3200 484 248 47 16 chr18 35161383 35161512 -51516036 - MIR SINE MIR -46 216 84 21 0 0 0 chr18 35162314 35162335 -51515213 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr18 35163330 35163353 -51514195 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 35166362 35166383 -51511165 + AT_rich Low_complexity Low_complexity 1 21 0 601 136 29 0 chr18 35166686 35166789 -51510759 + L1MD1 LINE L1 6035 6140 -102 22 56 0 0 chr18 35166897 35166933 -51510615 + AT_rich Low_complexity Low_complexity 1 36 0 372 210 118 42 chr18 35167160 35167279 -51510269 + MIR3 SINE MIR 58 185 -23 191 244 26 77 chr18 35167580 35167658 -51509890 - MIR SINE MIR -61 201 128 189 408 87 0 chr18 35167756 35167859 -51509689 - MIR SINE MIR -76 132 21 316 294 0 0 chr18 35171295 35171380 -51506168 + C-rich Low_complexity Low_complexity 3 87 0 884 171 71 14 chr18 35178461 35178672 -51498876 - L1MA7 LINE L1 0 6291 6069 35 71 0 0 chr18 35179824 35179894 -51497654 + AT_rich Low_complexity Low_complexity 1 70 0 22 35 0 0 chr18 35179967 35179996 -51497552 + AT_rich Low_complexity Low_complexity 1 29 0 415 280 70 0 chr18 35180007 35180150 -51497398 - MIR SINE MIR -32 230 78 3113 119 60 6 chr18 35180578 35181064 -51496484 - LTR64 LTR ERVK -1 512 1 234 91 0 0 chr18 35182922 35182955 -51494593 + (T)n Simple_repeat Simple_repeat 1 33 0 475 290 61 47 chr18 35183468 35183747 -51493801 - L2 LINE L2 0 3313 3031 1675 168 47 55 chr18 35183747 35184128 -51493420 + MLT1B LTR MaLR 1 378 -12 875 217 6 0 chr18 35184761 35184922 -51492626 - FRAM SINE Alu -4 162 1 449 297 124 10 chr18 35185261 35185463 -51492085 + MIR SINE MIR 1 225 -37 220 237 289 0 chr18 35185738 35185814 -51491734 - MER5A DNA MER1_type 0 189 92 382 282 92 34 chr18 35185958 35186164 -51491384 + L1ME4a LINE L1 5701 5918 -203 2099 118 7 3 chr18 35186164 35186468 -51491080 - AluSx SINE Alu -7 305 1 392 303 73 30 chr18 35189390 35189555 -51487993 - MER5A DNA MER1_type 0 189 18 187 253 190 13 chr18 35190995 35191074 -51486474 + MIR SINE MIR 38 130 -78 415 85 59 8 chr18 35191236 35191354 -51486194 + (TA)n Simple_repeat Simple_repeat 1 124 0 229 183 24 37 chr18 35191354 35191436 -51486112 + (TATAA)n Simple_repeat Simple_repeat 4 84 0 192 48 71 0 chr18 35191449 35191491 -51486057 + (TA)n Simple_repeat Simple_repeat 1 45 0 2697 202 58 13 chr18 35191491 35192111 -51485437 - L1MC3 LINE L1 -24 8179 7532 820 251 96 8 chr18 35192116 35192355 -51485193 - MLT1C LTR MaLR -6 461 202 3634 47 0 0 chr18 35192375 35192821 -51484727 - L1PA3 LINE L1 0 6155 5710 4338 22 0 1 chr18 35192821 35193688 -51483860 + L1P2 LINE L1 4882 5747 -408 554 241 78 12 chr18 35193688 35193854 -51483694 - MLT1C LTR MaLR -311 194 18 6975 208 110 65 chr18 35193874 35196439 -51481109 - L1MC3 LINE L1 -669 7534 4753 203 61 30 0 chr18 35196439 35196472 -51481076 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 6975 208 110 65 chr18 35196472 35197371 -51480177 - L1MC3 LINE L1 -3450 4753 3896 476 238 36 36 chr18 35197374 35197567 -51479981 - L1MC3 LINE L1 -5128 917 725 * 13913 35 2 3 chr18 35197558 35199270 -51478278 - L1PA4 LINE L1 -1355 4791 3081 7523 31 2 0 chr18 35199270 35200620 -51476928 + L1PA4 LINE L1 4803 6155 0 1628 245 92 66 chr18 35200641 35201338 -51476210 - L1MC3 LINE L1 -5328 717 3 714 349 73 51 chr18 35202790 35204015 -51473533 - L2 LINE L2 -9 3263 2011 2051 130 0 10 chr18 35204231 35204532 -51473016 + AluSg SINE Alu 3 300 -10 576 303 38 14 chr18 35205245 35205456 -51472092 + MIR SINE MIR 1 216 -46 224 289 133 0 chr18 35205469 35205559 -51471989 + L2 LINE L2 3143 3244 -28 2037 172 70 12 chr18 35205922 35206323 -51471225 - MSTA LTR MaLR 0 428 5 200 297 259 11 chr18 35207897 35208082 -51469466 - MIR SINE MIR -30 232 2 25 31 0 0 chr18 35208693 35208725 -51468823 + AT_rich Low_complexity Low_complexity 1 32 0 42 20 0 0 chr18 35208744 35208793 -51468755 + AT_rich Low_complexity Low_complexity 1 49 0 187 221 35 81 chr18 35209313 35209399 -51468149 - MIR3 SINE MIR -42 166 85 394 291 93 63 chr18 35209757 35210524 -51467024 + L1ME2 LINE L1 789 1578 -4818 274 265 144 23 chr18 35210625 35210757 -51466791 + L1MCc LINE L1 346 493 -5930 11742 44 4 0 chr18 35210834 35212301 -51465247 + L1PA4 LINE L1 3750 5222 -924 * 44102 40 2 1 chr18 35212277 35218404 -51459144 + L1PA3 LINE L1 1 6129 -26 212 57 0 29 chr18 35218406 35218441 -51459107 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 7064 36 18 1 chr18 35218441 35219404 -51458144 + L1PA4 LINE L1 5183 6160 0 25 0 0 0 chr18 35219448 35219473 -51458075 + AT_rich Low_complexity Low_complexity 1 25 0 2352 139 35 48 chr18 35219668 35219877 -51457671 + MSTB1 LTR MaLR 6 216 -216 2148 69 16 85 chr18 35219877 35220194 -51457354 - AluSp SINE Alu -18 295 1 2352 139 35 48 chr18 35220194 35220417 -51457131 + MSTB1 LTR MaLR 216 432 0 1189 228 91 7 chr18 35220490 35220898 -51456650 - L1M4 LINE L1 -1459 4687 4246 1655 303 47 8 chr18 35221013 35221545 -51456003 - ERVL LTR ERVL -1082 4682 4130 3768 310 91 34 chr18 35221574 35222354 -51455194 - ERVL LTR ERVL -1631 4023 3289 380 0 67 0 chr18 35222354 35222414 -51455134 + (TA)n Simple_repeat Simple_repeat 2 65 0 3768 310 91 34 chr18 35222414 35223796 -51453752 - ERVL LTR ERVL -2365 3289 1762 660 281 142 49 chr18 35223871 35224281 -51453267 - LTR41 LTR ERVL -10 763 316 550 221 40 34 chr18 35224304 35224453 -51453095 - LTR41 LTR ERVL -623 150 1 331 202 61 50 chr18 35224612 35224711 -51452837 + L1ME2 LINE L1 2079 2178 -4218 1567 247 41 20 chr18 35224762 35225252 -51452296 + L1ME2 LINE L1 5726 6225 -8 2471 109 3 32 chr18 35227115 35227490 -51450058 - THE1B LTR MaLR 0 364 1 363 258 116 74 chr18 35229847 35230037 -51447511 + MIR SINE MIR 54 251 -11 395 323 99 0 chr18 35231166 35231367 -51446181 + MIR SINE MIR 16 236 -26 2107 121 7 0 chr18 35231487 35231785 -51445763 - AluSg SINE Alu -10 300 1 21 0 0 0 chr18 35232657 35232678 -51444870 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 35234129 35234150 -51443398 + AT_rich Low_complexity Low_complexity 1 21 0 29 47 0 0 chr18 35234177 35234220 -51443328 + AT_rich Low_complexity Low_complexity 1 43 0 2842 256 46 51 chr18 35234281 35235272 -51442276 + L1MCa LINE L1 4 950 -5095 1057 132 132 0 chr18 35235275 35235555 -51441993 + L1MCa LINE L1 1281 1597 -4967 1187 196 0 56 chr18 35235571 35235841 -51441707 + AluJb SINE Alu 42 296 -16 915 195 87 34 chr18 35235841 35236026 -51441522 + L1M2 LINE L1 1732 1906 -4521 336 102 0 0 chr18 35236026 35236075 -51441473 + (TA)n Simple_repeat Simple_repeat 1 49 0 915 195 87 34 chr18 35236075 35236202 -51441346 + L1M2 LINE L1 1906 2186 -4241 2098 230 34 38 chr18 35236259 35236802 -51440746 + L1MCa LINE L1 2293 2831 -3733 2763 39 0 9 chr18 35236802 35237139 -51440409 + L1PA4 LINE L1 5819 6152 -3 2098 230 34 38 chr18 35237139 35237524 -51440024 + L1MCa LINE L1 2831 3216 -3348 1266 201 53 84 chr18 35237528 35237922 -51439626 - MSTB2 LTR MaLR -4 453 72 2226 231 66 25 chr18 35237953 35238708 -51438840 + L1MCa LINE L1 3666 4451 -2113 1738 198 23 20 chr18 35238817 35239170 -51438378 - MLT1A1 LTR MaLR -11 354 1 446 205 292 22 chr18 35239295 35239480 -51438068 - LTR33 LTR ERVL -273 248 14 2003 231 75 17 chr18 35240478 35241149 -51436399 - L1MD3 LINE L1 0 7808 7047 13853 161 22 16 chr18 35241149 35243239 -51434309 + ERVL-B1 LTR ERVL 3349 5457 -307 195 114 0 0 chr18 35243239 35243274 -51434274 + (TA)n Simple_repeat Simple_repeat 2 36 0 13853 161 22 16 chr18 35243274 35243577 -51433971 + ERVL-B1 LTR ERVL 5457 5757 -7 1102 210 33 54 chr18 35243577 35243965 -51433583 + MLT2B1 LTR ERVL 1 439 -81 26 30 0 0 chr18 35244110 35244143 -51433405 + AT_rich Low_complexity Low_complexity 1 33 0 4232 187 217 35 chr18 35244613 35246049 -51431499 - pTR5 LTR ERV1 0 2438 742 1646 210 55 80 chr18 35246194 35246647 -51430901 + MLT2B2 LTR ERVL 72 513 -2 21 0 0 0 chr18 35246736 35246757 -51430791 + AT_rich Low_complexity Low_complexity 1 21 0 212 146 0 42 chr18 35247818 35247866 -51429682 + (CCCTA)n Simple_repeat Simple_repeat 1 46 0 394 215 31 85 chr18 35248252 35248382 -51429166 + MLT1J LTR MaLR 124 246 -265 385 280 93 7 chr18 35248442 35248592 -51428956 + MLT1J LTR MaLR 347 509 -2 307 321 92 0 chr18 35248603 35248712 -51428836 + L2 LINE L2 3139 3257 -15 2030 121 3 13 chr18 35248962 35249260 -51428288 - AluSx SINE Alu -17 295 1 184 394 25 35 chr18 35249520 35249718 -51427830 - L2 LINE L2 -746 2568 2373 430 300 84 78 chr18 35249832 35250179 -51427369 - L2 LINE L2 -1217 2097 1749 333 199 76 76 chr18 35250534 35250665 -51426883 - MLT1J LTR MaLR -154 357 227 500 355 36 65 chr18 35250993 35251626 -51425922 - L2 LINE L2 -1984 1330 716 525 350 101 43 chr18 35253063 35253997 -51423551 - L1 LINE L1 -1095 5051 4064 2928 237 94 60 chr18 35255725 35256379 -51421169 - L1MCb LINE L1 -4229 2335 1705 2299 99 0 10 chr18 35256379 35256683 -51420865 + AluY SINE Alu 1 301 -10 2928 237 94 60 chr18 35256683 35257181 -51420367 - L1MCb LINE L1 -4859 1705 1226 2109 134 0 0 chr18 35257181 35257486 -51420062 + AluSx SINE Alu 1 305 -7 225 0 0 0 chr18 35257486 35257511 -51420037 + (CA)n Simple_repeat Simple_repeat 2 26 0 2928 237 94 60 chr18 35257511 35257673 -51419875 - L1MCb LINE L1 -5338 1226 1071 1615 216 35 14 chr18 35257673 35258039 -51419509 - MLT1A2 LTR MaLR 0 374 1 2928 237 94 60 chr18 35258039 35258952 -51418596 - L1MCb LINE L1 -5493 1071 3 872 137 36 114 chr18 35259023 35259242 -51418306 - L1MA9 LINE L1 -22 6290 6089 222 62 0 0 chr18 35259586 35259618 -51417930 + (TG)n Simple_repeat Simple_repeat 1 32 0 211 393 0 0 chr18 35260143 35260232 -51417316 + L2 LINE L2 2653 2741 -573 425 88 0 0 chr18 35260594 35260651 -51416897 + Alu SINE Alu 1 57 -261 * 629 158 0 35 chr18 35260646 35260760 -51416788 - AluSc SINE Alu -103 206 97 298 98 0 0 chr18 35260760 35260844 -51416704 + Alu SINE Alu 244 327 0 208 265 88 0 chr18 35260875 35260943 -51416605 + MIR SINE MIR 124 197 -65 3327 189 60 27 chr18 35261521 35262220 -51415328 + MER72 LTR ERV1 1 722 0 833 275 27 18 chr18 35263492 35263714 -51413834 - MIR SINE MIR -29 233 10 31 0 0 0 chr18 35264386 35264417 -51413131 + AT_rich Low_complexity Low_complexity 1 31 0 350 288 42 57 chr18 35265277 35265489 -51412059 - L2 LINE L2 -11 3302 3094 200 331 132 0 chr18 35265706 35265842 -51411706 + MIR SINE MIR 82 235 -27 1063 233 5 18 chr18 35265878 35266097 -51411451 - MER58A DNA MER1_type -8 216 1 641 160 42 8 chr18 35266808 35266927 -51410621 + AluSg/x SINE Alu 181 303 -7 382 298 88 18 chr18 35267565 35267763 -51409785 + MIR SINE MIR 37 258 -4 1189 172 128 143 chr18 35267763 35268287 -51409261 - MER4C LTR ERV1 0 465 17 270 0 0 0 chr18 35268291 35268321 -51409227 + (TG)n Simple_repeat Simple_repeat 2 31 0 296 146 0 39 chr18 35268358 35268461 -51409087 + (TA)n Simple_repeat Simple_repeat 2 100 0 325 246 40 3 chr18 35268462 35268569 -51408979 + L1MC4 LINE L1 6614 6700 -1342 2104 90 0 4 chr18 35268569 35268837 -51408711 - AluSc SINE Alu -42 267 1 328 318 18 0 chr18 35269048 35269158 -51408390 + MIR SINE MIR 21 132 -130 212 167 0 0 chr18 35269890 35269932 -51407616 + A-rich Low_complexity Low_complexity 2 43 0 186 43 0 0 chr18 35271307 35271330 -51406218 + (TTTAG)n Simple_repeat Simple_repeat 3 25 0 229 282 182 0 chr18 35272447 35272557 -51404991 + L2 LINE L2 3182 3311 -2 1400 198 66 66 chr18 35273614 35274009 -51403539 + MLT1D LTR MaLR 5 399 -106 305 259 250 21 chr18 35274129 35274365 -51403183 + L1ME4a LINE L1 5830 6119 -2 243 327 109 24 chr18 35275106 35275271 -51402277 + MIR SINE MIR 13 191 -71 25 31 0 0 chr18 35277603 35277635 -51399913 + AT_rich Low_complexity Low_complexity 1 32 0 204 40 0 0 chr18 35277684 35277709 -51399839 + (T)n Simple_repeat Simple_repeat 1 25 0 205 398 11 0 chr18 35278767 35278855 -51398693 - MIR SINE MIR -133 129 41 21 82 0 0 chr18 35279130 35279179 -51398369 + AT_rich Low_complexity Low_complexity 1 49 0 206 205 0 0 chr18 35281066 35281105 -51396443 + CT-rich Low_complexity Low_complexity 1 39 0 207 364 25 0 chr18 35281312 35281430 -51396118 + L2 LINE L2 3193 3313 0 6496 210 63 15 chr18 35281935 35283594 -51393954 - Cheshire DNA MER1_type 0 2420 682 294 306 109 48 chr18 35283824 35284154 -51393394 - L1M4 LINE L1 -2373 3773 3424 28 61 0 0 chr18 35284210 35284259 -51393289 + AT_rich Low_complexity Low_complexity 1 49 0 379 303 84 28 chr18 35284606 35284857 -51392691 - L1M4 LINE L1 -3430 2716 2452 1839 148 40 35 chr18 35284859 35284896 -51392652 - THE1C LTR MaLR 0 375 340 1974 155 3 0 chr18 35284896 35285205 -51392343 + AluSx SINE Alu 1 310 -2 1839 148 40 35 chr18 35285205 35285538 -51392010 - THE1C LTR MaLR -35 340 3 971 137 63 17 chr18 35285538 35285713 -51391835 - THE1C-int LTR MaLR -1 1579 1397 * 8793 50 0 5 chr18 35285700 35286819 -51390729 - L1P LINE L1 -1807 4339 3227 * 9111 34 1 0 chr18 35286816 35288693 -51388855 + L1PA3 LINE L1 4278 6155 0 7354 132 107 10 chr18 35288693 35289967 -51387581 - THE1C-int LTR MaLR -181 1399 3 1918 175 30 19 chr18 35289969 35290340 -51387208 - THE1C LTR MaLR 0 375 1 1065 168 66 0 chr18 35290438 35290635 -51386913 + MER2 DNA MER2_type 1 210 -135 183 359 16 0 chr18 35292395 35292459 -51385089 - MIR SINE MIR -151 111 47 279 0 0 0 chr18 35292909 35292940 -51384608 + (CA)n Simple_repeat Simple_repeat 2 32 0 1771 226 15 50 chr18 35292956 35293294 -51384254 - MLT2B1 LTR ERVL -76 444 125 1310 194 55 27 chr18 35293294 35293587 -51383961 - AluJo SINE Alu -7 305 5 1771 226 15 50 chr18 35293587 35293708 -51383840 - MLT2B1 LTR ERVL -395 125 1 387 0 0 0 chr18 35293909 35293952 -51383596 + (CA)n Simple_repeat Simple_repeat 1 43 0 23 0 0 0 chr18 35294395 35294418 -51383130 + AT_rich Low_complexity Low_complexity 1 23 0 767 171 59 0 chr18 35295299 35295469 -51382079 - L1MA8 LINE L1 0 6291 6112 1107 179 47 39 chr18 35295470 35295727 -51381821 + L1MA8 LINE L1 5861 6119 -172 579 261 136 0 chr18 35297870 35298054 -51379494 + MER3 DNA MER1_type 1 209 0 223 314 103 13 chr18 35299266 35299422 -51378126 - L2 LINE L2 -948 2366 2197 355 329 34 24 chr18 35299815 35300022 -51377526 - L2 LINE L2 -1342 1972 1764 382 284 95 9 chr18 35301013 35301129 -51376419 - L2 LINE L2 0 3313 3188 704 184 17 106 chr18 35302491 35302670 -51374878 + AluJo SINE Alu 47 209 -103 198 0 0 0 chr18 35302698 35302720 -51374828 + (A)n Simple_repeat Simple_repeat 1 22 0 321 235 25 84 chr18 35302765 35302884 -51374664 + MIR3 SINE MIR 87 198 -10 240 59 0 0 chr18 35303079 35303113 -51374435 + (TG)n Simple_repeat Simple_repeat 1 34 0 292 286 91 59 chr18 35303213 35303433 -51374115 - L2 LINE L2 -445 2869 2643 544 285 29 0 chr18 35303692 35303829 -51373719 + MER45A DNA AcHobo 30 170 -8 1012 293 96 35 chr18 35304610 35304650 -51372898 - L1MC4a LINE L1 -1947 5861 5825 1563 191 0 30 chr18 35304650 35304953 -51372595 + AluSx SINE Alu 1 294 -18 1012 293 96 35 chr18 35304953 35305475 -51372073 - L1MC4a LINE L1 -1983 5825 5265 315 0 0 0 chr18 35305566 35305601 -51371947 + (TG)n Simple_repeat Simple_repeat 2 36 0 230 277 108 0 chr18 35305765 35305830 -51371718 + MER63 DNA MER1_type 991 1062 0 222 105 0 0 chr18 35306297 35306335 -51371213 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 3693 14 0 0 chr18 35306337 35306758 -51370790 - L1PA3 LINE L1 -1705 4441 4021 8047 27 2 0 chr18 35306758 35308478 -51369070 + L1PA3 LINE L1 4434 6155 0 1589 235 33 16 chr18 35308938 35309368 -51368180 + L1MB1 LINE L1 5710 6146 -22 200 311 0 11 chr18 35309472 35309562 -51367986 + CT-rich Low_complexity Low_complexity 2 90 0 6739 115 10 13 chr18 35310543 35311506 -51366042 + L1MA1 LINE L1 5101 6060 -242 2364 98 0 0 chr18 35311506 35311813 -51365735 + AluSx SINE Alu 1 307 -5 6739 115 10 13 chr18 35311813 35312040 -51365508 + L1MA1 LINE L1 6060 6286 -16 318 256 22 22 chr18 35312055 35312145 -51365403 - L1MC4 LINE L1 -1339 6703 6614 251 113 19 0 chr18 35312151 35312204 -51365344 + (TA)n Simple_repeat Simple_repeat 2 55 0 313 301 11 0 chr18 35312206 35312299 -51365249 - L1MC4 LINE L1 -1337 6705 6612 307 253 32 21 chr18 35312307 35312402 -51365146 + L1MC4 LINE L1 6610 6705 -1337 231 152 22 0 chr18 35312402 35312448 -51365100 + (TA)n Simple_repeat Simple_repeat 1 47 0 21 57 0 0 chr18 35312453 35312488 -51365060 + AT_rich Low_complexity Low_complexity 1 35 0 7035 48 8 0 chr18 35312681 35314155 -51363393 - L1PA6 LINE L1 0 6154 4678 11984 69 11 11 chr18 35314155 35315807 -51361741 + L1PA6 LINE L1 3014 4665 -1481 31 0 0 0 chr18 35316304 35316335 -51361213 + AT_rich Low_complexity Low_complexity 1 31 0 1481 206 11 11 chr18 35317409 35317732 -51359816 + AluJo SINE Alu 1 323 0 1702 166 10 26 chr18 35317911 35318219 -51359329 - AluJo SINE Alu -5 307 5 1778 161 24 40 chr18 35320001 35320381 -51357167 + L1MA7 LINE L1 5912 6285 -6 6656 183 19 2 chr18 35320925 35323031 -51354517 + L1PA14 LINE L1 3999 6158 -3 1560 192 21 18 chr18 35323185 35323471 -51354077 - AluJo SINE Alu -25 287 1 234 283 22 43 chr18 35323553 35323645 -51353903 + L2 LINE L2 2180 2269 -1045 2099 254 14 45 chr18 35324170 35324722 -51352826 + MER87 LTR ERV1 1 535 -6 5892 153 36 69 chr18 35325137 35325298 -51352250 + LTR57-int LTR ERVL 303 468 -4875 2075 160 93 0 chr18 35325298 35325686 -51351862 - MSTB LTR MaLR -2 424 1 5892 153 36 69 chr18 35325686 35326862 -51350686 + LTR57-int LTR ERVL 468 1596 -3747 5441 169 49 68 chr18 35326077 35328283 -51349265 + MER49-int LTR ERV1 786 4160 -2171 * 1582 143 71 32 chr18 35328372 35328680 -51348868 - THE1C LTR MaLR -55 320 1 863 141 11 103 chr18 35328694 35328879 -51348669 + MER49-int LTR ERV1 3786 3953 -4167 961 197 35 35 chr18 35329080 35329278 -51348270 + MER49-int LTR ERV1 5939 6136 -622 * 1573 178 7 13 chr18 35329277 35329587 -51347961 + MER49-int LTR ERV1 6443 7097 -4 1440 159 43 29 chr18 35329590 35329867 -51347681 + MER49 LTR ERV1 1 281 -642 698 194 52 0 chr18 35329855 35329989 -51347559 + MER49 LTR ERV1 611 751 -172 * 558 296 82 61 chr18 35330177 35330741 -51346807 + LOR1-int LTR ERV1 4965 7672 -448 1926 239 37 33 chr18 35331224 35331763 -51345785 + MER87 LTR ERV1 1 541 0 2410 73 0 3 chr18 35332299 35332601 -51344947 + AluY SINE Alu 1 301 -10 28 0 0 0 chr18 35334276 35334304 -51343244 + AT_rich Low_complexity Low_complexity 1 28 0 455 360 29 59 chr18 35334536 35334911 -51342637 + L2 LINE L2 2153 2516 -798 411 310 76 70 chr18 35334946 35335275 -51342273 - L2 LINE L2 -19 3294 2964 495 249 86 35 chr18 35335729 35335926 -51341622 + LTR33 LTR ERVL 304 510 -11 440 267 50 54 chr18 35336033 35336254 -51341294 - HAL1 LINE L1 -481 2026 1807 698 266 64 66 chr18 35336292 35336930 -51340618 - HAL1 LINE L1 -939 1568 932 344 366 53 0 chr18 35337086 35337313 -51340235 - HAL1 LINE L1 -1940 567 329 303 288 31 94 chr18 35337431 35337591 -51339957 - HAL1 LINE L1 -2342 165 16 413 271 86 7 chr18 35337841 35337981 -51339567 + MIR SINE MIR 102 252 -10 223 256 35 47 chr18 35337950 35338036 -51339512 - L3 LINE CR1 -519 1058 974 * 216 391 43 9 chr18 35338140 35338255 -51339293 + L2 LINE L2 3180 3298 -15 318 345 92 91 chr18 35338273 35338847 -51338701 - L3 LINE CR1 -672 905 331 230 347 20 10 chr18 35338918 35339016 -51338532 - MIR SINE MIR -162 100 2 3233 296 99 28 chr18 35339177 35340893 -51336655 - L2 LINE L2 0 3313 1480 359 268 128 64 chr18 35340849 35341084 -51336464 + L3 LINE CR1 1200 1449 -128 * 262 260 112 71 chr18 35341114 35341283 -51336265 - MIR SINE MIR -22 240 65 22 0 0 0 chr18 35342745 35342767 -51334781 + AT_rich Low_complexity Low_complexity 1 22 0 1455 194 10 31 chr18 35342768 35343061 -51334487 - AluJo SINE Alu -25 287 1 27 81 0 0 chr18 35344249 35344311 -51333237 + AT_rich Low_complexity Low_complexity 1 62 0 216 123 18 35 chr18 35345423 35345480 -51332068 + GA-rich Low_complexity Low_complexity 2 57 0 3112 187 58 95 chr18 35345799 35346645 -51330903 + MLT1B-int LTR MaLR 550 1364 -7 1076 204 32 88 chr18 35346652 35347063 -51330485 + MLT1B LTR MaLR 1 388 -2 505 306 94 22 chr18 35347182 35347499 -51330049 + MLT1K LTR MaLR 125 541 -47 234 128 0 0 chr18 35351049 35351088 -51326460 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 213 337 53 21 chr18 35351108 35351203 -51326345 + MIR3 SINE MIR 105 202 -6 25 51 0 0 chr18 35351213 35351252 -51326296 + AT_rich Low_complexity Low_complexity 1 39 0 2342 98 0 0 chr18 35351339 35351645 -51325903 + AluSc SINE Alu 1 306 -3 2113 83 4 0 chr18 35351856 35352157 -51325391 - AluSc SINE Alu 0 302 1 264 346 79 53 chr18 35354573 35354839 -51322709 + L2 LINE L2 2953 3225 -47 205 243 29 97 chr18 35354827 35354930 -51322618 + MIR SINE MIR 157 252 -10 * 21 71 0 0 chr18 35355485 35355527 -51322021 + AT_rich Low_complexity Low_complexity 1 42 0 1267 276 80 71 chr18 35356526 35356710 -51320838 + MER20B DNA MER1_type 1 182 -601 1578 164 36 59 chr18 35356710 35357014 -51320534 + AluJo SINE Alu 3 299 -13 1267 276 80 71 chr18 35357014 35357605 -51319943 + MER20B DNA MER1_type 182 783 0 282 280 0 0 chr18 35357720 35357795 -51319753 + L1ME LINE L1 5584 5658 -463 223 355 21 43 chr18 35357971 35358112 -51319436 + MIR SINE MIR 18 155 -107 13510 144 20 24 chr18 35358302 35360122 -51317426 - Tigger1 DNA MER2_type 0 2418 610 1657 159 23 23 chr18 35360122 35360424 -51317124 - AluJo SINE Alu -10 302 1 13510 144 20 24 chr18 35360424 35361032 -51316516 - Tigger1 DNA MER2_type -1808 610 1 461 252 53 0 chr18 35363386 35363517 -51314031 + MIR SINE MIR 54 191 -71 21 0 0 0 chr18 35363566 35363587 -51313961 + AT_rich Low_complexity Low_complexity 1 21 0 9739 81 12 1 chr18 35363649 35365156 -51312392 - L1P3 LINE L1 -608 5546 4028 6506 45 10 0 chr18 35365156 35365981 -51311567 + L1PA7 LINE L1 5328 6169 0 188 255 21 0 chr18 35366199 35366246 -51311302 + L3 LINE CR1 1327 1374 -203 299 256 26 0 chr18 35366391 35366469 -51311079 - MIR SINE MIR -56 206 127 189 357 71 24 chr18 35366608 35366692 -51310856 + L3 LINE CR1 1484 1571 -6 769 325 12 12 chr18 35366837 35367080 -51310468 - MIR SINE MIR -13 249 7 23 0 0 0 chr18 35368943 35368966 -51308582 + AT_rich Low_complexity Low_complexity 1 23 0 329 331 115 0 chr18 35371058 35371215 -51306333 - MIR3 SINE MIR -2 206 32 533 312 37 14 chr18 35371553 35371771 -51305777 - MIR SINE MIR 0 262 40 217 315 87 11 chr18 35373989 35374081 -51303467 - L2 LINE L2 -17 3296 3198 690 317 52 10 chr18 35374163 35374472 -51303076 + MER46C DNA MER2_type 2 323 -15 490 328 93 24 chr18 35374571 35374903 -51302645 + MLT1K LTR MaLR 147 501 -87 22 0 0 0 chr18 35375232 35375254 -51302294 + AT_rich Low_complexity Low_complexity 1 22 0 287 158 35 0 chr18 35375444 35375501 -51302047 + U2 snRNA snRNA 1 59 -129 303 301 117 68 chr18 35376160 35376366 -51301182 - MIR SINE MIR -27 235 20 572 261 98 34 chr18 35376625 35377066 -51300482 - L1MEd LINE L1 -4907 1403 896 373 261 52 15 chr18 35377274 35377408 -51300140 - L1MEd LINE L1 -5934 185 47 2260 92 3 0 chr18 35377903 35378196 -51299352 + AluSp SINE Alu 2 295 -18 250 299 15 0 chr18 35378258 35378325 -51299223 + MER69 DNA AcHobo 1 68 -2458 351 246 25 34 chr18 35378511 35378629 -51298919 + MER69 DNA AcHobo 2410 2526 0 1473 203 62 9 chr18 35379294 35379619 -51297929 + MER2 DNA MER2_type 2 343 -1 218 186 0 0 chr18 35382968 35383011 -51294537 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 299 161 62 62 chr18 35383823 35383904 -51293644 - MER3 DNA MER1_type -50 159 79 231 184 0 0 chr18 35383901 35383939 -51293609 - MER3 DNA MER1_type -164 45 8 * 223 133 13 80 chr18 35384074 35384149 -51293399 + (TTATA)n Simple_repeat Simple_repeat 4 73 0 250 282 56 0 chr18 35384990 35385061 -51292487 - MIR SINE MIR -65 197 123 234 150 0 0 chr18 35385196 35385236 -51292312 + (TG)n Simple_repeat Simple_repeat 2 41 0 291 182 18 18 chr18 35385858 35385913 -51291635 - L2 LINE L2 -5 3308 3254 * 513 245 75 19 chr18 35385889 35386048 -51291500 - MIR SINE MIR -94 168 1 33 80 0 0 chr18 35386340 35386415 -51291133 + AT_rich Low_complexity Low_complexity 1 75 0 1491 204 151 55 chr18 35386416 35386887 -51290661 + MLT2B1 LTR ERVL 3 518 -2 329 283 105 20 chr18 35387323 35387475 -51290073 + MLT1K LTR MaLR 347 511 -77 205 283 0 0 chr18 35389430 35389483 -51288065 + L2 LINE L2 3218 3270 -2 426 99 0 63 chr18 35389694 35389805 -51287743 + (GAAA)n Simple_repeat Simple_repeat 3 106 0 784 206 74 0 chr18 35389844 35390019 -51287529 + MER5A DNA MER1_type 1 188 -1 409 296 79 45 chr18 35390021 35390463 -51287085 + L1MC5 LINE L1 7331 7787 -174 1177 189 11 75 chr18 35390468 35390748 -51286800 + AluJo SINE Alu 17 278 -34 2637 119 11 0 chr18 35390748 35391118 -51286430 + THE1C LTR MaLR 1 374 -1 36 40 0 0 chr18 35391239 35391289 -51286259 + AT_rich Low_complexity Low_complexity 1 50 0 299 256 181 25 chr18 35391402 35391562 -51285986 - MER69 DNA AcHobo -3 2523 2339 5496 205 23 33 chr18 35391564 35392947 -51284601 + L1 LINE L1 3998 5366 -780 283 289 0 0 chr18 35393047 35393123 -51284425 - MLT1A1 LTR MaLR -289 76 1 739 257 154 37 chr18 35393192 35393313 -51284235 + L1MEc LINE L1 303 408 -5988 771 184 0 0 chr18 35393313 35393438 -51284110 - FLAM_C SINE Alu -8 125 1 739 257 154 37 chr18 35393438 35393693 -51283855 + L1MEc LINE L1 408 723 -5673 6279 32 3 2 chr18 35396983 35397857 -51279691 + L1PA4 LINE L1 5140 6013 -142 408 242 0 0 chr18 35397910 35398063 -51279485 + C-rich Low_complexity Low_complexity 1 153 0 252 279 0 0 chr18 35398100 35398222 -51279326 + C-rich Low_complexity Low_complexity 1 122 0 203 353 12 23 chr18 35398239 35398412 -51279136 + C-rich Low_complexity Low_complexity 4 174 0 225 270 0 0 chr18 35398457 35398568 -51278980 + C-rich Low_complexity Low_complexity 1 111 0 8694 42 5 0 chr18 35398692 35399776 -51277772 - L1P LINE L1 -3358 2788 1700 4824 142 16 0 chr18 35399878 35400620 -51276928 - Tigger1 DNA MER2_type -1664 754 1 382 319 47 21 chr18 35400681 35400872 -51276676 + MER117 DNA MER1_type 2 197 0 4932 136 20 10 chr18 35401186 35401341 -51276207 + L1PA16 LINE L1 5333 5485 -681 2036 109 7 0 chr18 35401341 35401662 -51275886 + AluSg SINE Alu 3 325 0 4932 136 20 10 chr18 35401662 35402308 -51275240 + L1PA16 LINE L1 5485 6143 -23 1149 212 79 19 chr18 35402362 35403066 -51274482 - MER69 DNA AcHobo -243 2283 1457 406 132 0 15 chr18 35403067 35403135 -51274413 + L1MD2 LINE L1 6264 6330 -29 574 253 130 12 chr18 35403497 35403659 -51273889 - MER5A DNA MER1_type 0 189 9 1381 261 97 82 chr18 35403954 35404257 -51273291 - MER69 DNA AcHobo -1318 1208 911 345 47 0 0 chr18 35404257 35404300 -51273248 + (TG)n Simple_repeat Simple_repeat 2 44 0 1381 261 97 82 chr18 35404300 35404874 -51272674 - MER69 DNA AcHobo -1615 911 318 339 227 0 13 chr18 35405214 35405289 -51272259 + LTR67 LTR ERVL 387 460 -97 21 0 0 0 chr18 35405291 35405312 -51272236 + AT_rich Low_complexity Low_complexity 1 21 0 2167 112 10 3 chr18 35405415 35405710 -51271838 + AluSx SINE Alu 1 297 -15 1716 189 51 16 chr18 35405779 35406150 -51271398 + L1MB2 LINE L1 5265 5648 -523 11481 133 14 8 chr18 35406150 35406684 -51270864 - Tigger1 DNA MER2_type 0 2418 1889 186 43 0 0 chr18 35406684 35406707 -51270841 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 11481 133 14 8 chr18 35406707 35407983 -51269565 - Tigger1 DNA MER2_type -529 1889 597 1947 195 16 11 chr18 35407983 35408353 -51269195 - Tigger1 DNA MER2_type -2046 372 1 2656 167 35 8 chr18 35408353 35408861 -51268687 + L1MB2 LINE L1 5647 6168 -3 1973 86 0 12 chr18 35409023 35409280 -51268268 + AluSg SINE Alu 1 254 -56 23 33 0 0 chr18 35409286 35409316 -51268232 + AT_rich Low_complexity Low_complexity 1 30 0 410 238 66 8 chr18 35410629 35410751 -51266797 - MIR SINE MIR -15 247 119 2289 137 17 3 chr18 35410790 35411149 -51266399 + THE1B LTR MaLR 1 364 0 23 33 0 0 chr18 35411252 35411282 -51266266 + AT_rich Low_complexity Low_complexity 1 30 0 792 232 198 31 chr18 35411291 35411675 -51265873 - MLT1J2 LTR MaLR 0 450 3 1119 164 35 0 chr18 35412144 35412345 -51265203 + MER2 DNA MER2_type 3 210 -135 235 323 0 0 chr18 35412390 35412455 -51265093 + MER2 DNA MER2_type 280 344 -1 21 0 0 0 chr18 35412547 35412568 -51264980 + AT_rich Low_complexity Low_complexity 1 21 0 792 285 87 13 chr18 35413075 35413387 -51264161 - MER46C DNA MER2_type 0 338 4 7153 226 49 29 chr18 35413536 35416203 -51261345 + L1MCa LINE L1 26 2880 -3546 2350 156 136 7 chr18 35416214 35416274 -51261274 + L1MC1 LINE L1 5740 5791 -542 2124 127 3 0 chr18 35416274 35416581 -51260967 - AluSq SINE Alu -5 308 1 2350 156 136 7 chr18 35416581 35416983 -51260565 + L1MC1 LINE L1 5791 6262 -71 234 128 0 0 chr18 35417003 35417042 -51260506 + (CA)n Simple_repeat Simple_repeat 2 40 0 370 252 7 7 chr18 35417087 35417230 -51260318 + (TA)n Simple_repeat Simple_repeat 1 143 0 2222 128 85 10 chr18 35417926 35418324 -51259224 + MSTA LTR MaLR 1 428 0 478 285 51 0 chr18 35418481 35418618 -51258930 + MIR SINE MIR 54 197 -65 180 222 0 0 chr18 35419444 35419480 -51258068 - MIR SINE MIR -120 142 107 1197 235 8 0 chr18 35419943 35420177 -51257371 - Tigger7 DNA MER2_type -469 236 1 896 229 67 12 chr18 35420205 35420458 -51257090 + L1ME1 LINE L1 5542 5808 -358 842 210 18 59 chr18 35420460 35420732 -51256816 + L1ME1 LINE L1 5902 6162 -4 339 294 62 57 chr18 35421118 35421295 -51256253 - MIR SINE MIR -76 186 9 1662 187 37 3 chr18 35422449 35422749 -51254799 + AluJb SINE Alu 3 312 0 227 258 15 0 chr18 35423227 35423293 -51254255 + MIR SINE MIR 185 251 -11 591 270 59 25 chr18 35423474 35423711 -51253837 - L2 LINE L2 -5 3308 3064 384 376 66 43 chr18 35423872 35424700 -51252848 + L2 LINE L2 237 1083 -2231 847 245 31 5 chr18 35425192 35425388 -51252160 - MER3 DNA MER1_type -8 201 1 21 0 0 0 chr18 35425700 35425721 -51251827 + AT_rich Low_complexity Low_complexity 1 21 0 1403 254 108 17 chr18 35425897 35426315 -51251233 + L1MB8 LINE L1 20 475 -6384 3378 220 83 44 chr18 35426319 35427400 -51250148 + L1MB8 LINE L1 595 1819 -5128 4730 243 62 15 chr18 35427410 35429113 -51248435 + L1MB8 LINE L1 3014 4797 -2160 1341 216 30 18 chr18 35429168 35429561 -51247987 - L1M4 LINE L1 -3208 2938 2541 1146 257 18 6 chr18 35429575 35429918 -51247630 + L1MB8 LINE L1 4830 5176 -1781 3122 151 34 20 chr18 35429952 35430514 -51247034 - L1PA16 LINE L1 -4 6162 5593 1975 213 70 16 chr18 35430518 35431078 -51246470 - L1PA16 LINE L1 -879 5267 4678 252 155 17 0 chr18 35431090 35431148 -51246400 + L1MB8 LINE L1 5508 5566 -1391 325 159 0 40 chr18 35431156 35431282 -51246266 + (TA)n Simple_repeat Simple_repeat 2 122 0 2034 201 23 40 chr18 35431306 35431837 -51245711 + L1MB8 LINE L1 6468 6989 0 226 239 104 0 chr18 35432575 35432642 -51244906 - MIR3 SINE MIR -41 167 94 776 176 18 47 chr18 35432676 35432846 -51244702 - FRAM SINE Alu -13 163 1 21 36 0 0 chr18 35432933 35432961 -51244587 + AT_rich Low_complexity Low_complexity 1 28 0 1975 133 10 7 chr18 35433191 35433484 -51244064 - AluSg SINE Alu -16 294 1 183 100 0 0 chr18 35435203 35435233 -51242315 + (TTTTTA)n Simple_repeat Simple_repeat 2 31 0 690 103 0 0 chr18 35435233 35435330 -51242218 - HY3 scRNA scRNA -2 99 3 559 357 114 34 chr18 35435585 35436216 -51241332 + L2 LINE L2 2587 3272 0 403 343 68 0 chr18 35436805 35436951 -51240597 + L2 LINE L2 3116 3271 -1 3068 133 7 60 chr18 35437293 35437938 -51239610 + MER4B LTR ERV1 1 779 0 195 274 82 14 chr18 35438154 35438227 -51239321 - MIR SINE MIR -109 153 76 21 36 0 0 chr18 35439728 35439756 -51237792 + AT_rich Low_complexity Low_complexity 1 28 0 1211 157 0 0 chr18 35439786 35439971 -51237577 + MLT2B1 LTR ERVL 1 185 -335 8415 172 30 3 chr18 35439971 35441439 -51236109 + ERVL-B1 LTR ERVL 4258 5764 0 2576 194 46 6 chr18 35441432 35441892 -51235656 + MLT2B1 LTR ERVL 1 484 -36 444 37 0 0 chr18 35441892 35441946 -51235602 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 2576 194 46 6 chr18 35441946 35441985 -51235563 + MLT2B1 LTR ERVL 484 520 0 335 246 97 26 chr18 35443076 35443190 -51234358 - MIR SINE MIR -70 192 71 362 311 146 33 chr18 35443304 35443516 -51234032 + MIR SINE MIR 11 246 -16 3383 173 15 87 chr18 35443649 35444515 -51233033 - L1MA7 LINE L1 -261 6030 5227 1364 172 4 0 chr18 35444515 35444775 -51232773 + L1MA3 LINE L1 6042 6304 -1 24 0 0 0 chr18 35444776 35444800 -51232748 + AT_rich Low_complexity Low_complexity 1 24 0 273 200 50 20 chr18 35445139 35445239 -51232309 + (CAAA)n Simple_repeat Simple_repeat 2 104 0 218 241 35 0 chr18 35445709 35445767 -51231781 + MIR SINE MIR 92 151 -57 211 215 31 15 chr18 35446018 35446083 -51231465 + (TA)n Simple_repeat Simple_repeat 2 67 0 184 273 11 57 chr18 35446455 35446543 -51231005 + MIR SINE MIR 4 87 -121 253 363 73 8 chr18 35447274 35447398 -51230150 + L2 LINE L2 3154 3285 -28 271 254 0 0 chr18 35448145 35448216 -51229332 - L3b LINE CR1 -388 1195 1125 418 341 99 25 chr18 35449128 35449451 -51228097 + L2 LINE L2 2153 2499 -815 230 400 19 19 chr18 35449475 35449580 -51227968 - L2 LINE L2 -22 3250 3146 204 258 56 79 chr18 35449598 35449687 -51227861 - MER91C DNA MER1_type -53 87 1 424 328 94 60 chr18 35449759 35450438 -51227110 + L2 LINE L2 2567 3272 0 731 219 129 0 chr18 35450891 35451101 -51226447 - L1MA9 LINE L1 -37 6275 6039 324 385 80 0 chr18 35451204 35451417 -51226131 + L2 LINE L2 1931 2160 -1154 251 278 134 10 chr18 35453194 35453291 -51224257 - MIR SINE MIR -6 256 148 2321 181 19 7 chr18 35453309 35453730 -51223818 + MSTB LTR MaLR 1 426 0 580 298 104 11 chr18 35453930 35454306 -51223242 + L1ME4a LINE L1 5532 5942 -179 565 317 150 20 chr18 35454618 35455206 -51222342 - L2 LINE L2 -1 3271 2608 2229 80 43 3 chr18 35455366 35455667 -51221881 + AluSq SINE Alu 1 313 0 25 0 0 0 chr18 35456281 35456306 -51221242 + AT_rich Low_complexity Low_complexity 1 25 0 234 234 0 0 chr18 35457570 35457617 -51219931 + (TG)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr18 35457727 35457748 -51219800 + (TA)n Simple_repeat Simple_repeat 2 22 0 180 0 0 0 chr18 35458099 35458119 -51219429 + (CAA)n Simple_repeat Simple_repeat 2 21 0 198 245 19 19 chr18 35458298 35458351 -51219197 - MER5A DNA MER1_type -1 188 136 792 309 60 52 chr18 35459675 35460158 -51217390 + LTR33A LTR ERVL 37 523 0 26 74 0 0 chr18 35460201 35460255 -51217293 + AT_rich Low_complexity Low_complexity 1 54 0 260 357 36 0 chr18 35461004 35461088 -51216460 + L2 LINE L2 3168 3254 -18 358 260 236 0 chr18 35462190 35462317 -51215231 + MER5A DNA MER1_type 27 183 -6 238 204 20 0 chr18 35462485 35462534 -51215014 + CT-rich Low_complexity Low_complexity 2 51 0 216 163 0 0 chr18 35463977 35464020 -51213528 + GA-rich Low_complexity Low_complexity 2 44 0 1499 144 21 14 chr18 35464109 35464393 -51213155 + L1MA5A LINE L1 6012 6297 0 222 264 47 62 chr18 35464638 35464767 -51212781 + L2 LINE L2 3129 3255 -58 505 213 250 20 chr18 35464785 35465029 -51212519 - MER5C DNA MER1_type 0 324 25 12388 208 41 33 chr18 35465072 35467989 -51209559 + L1M2 LINE L1 3 2968 -3880 1784 162 0 3 chr18 35467989 35468273 -51209275 + AluSx SINE Alu 1 283 -29 12388 208 41 33 chr18 35468273 35469568 -51207980 + L1M2 LINE L1 2968 4251 -2597 1543 154 30 3 chr18 35569568 35569867 -51107681 + L1P LINE L1 4375 4681 -1465 3333 214 29 84 chr18 35569867 35570943 -51106605 + MER52A LTR ERV1 179 1195 -560 247 172 241 0 chr18 35570936 35570994 -51106554 + MER52A LTR ERV1 1684 1755 0 * 1727 153 132 0 chr18 35570994 35571318 -51106230 + MER66A LTR ERV1 112 478 0 780 288 116 13 chr18 35573173 35573552 -51103996 + HAL1 LINE L1 75 492 -2015 647 232 67 137 chr18 35573563 35574132 -51103416 - MLT1H1 LTR MaLR -10 532 4 2662 90 21 0 chr18 35574187 35574565 -51102983 - MER41A LTR ERV1 -88 466 81 738 329 140 46 chr18 35574602 35575304 -51102244 + HAL1 LINE L1 575 1342 -1165 1764 172 55 36 chr18 35575326 35575745 -51101803 + MLT1C LTR MaLR 40 466 -1 1009 285 96 53 chr18 35575746 35576865 -51100683 + HAL1 LINE L1 1341 2507 0 277 325 9 0 chr18 35576985 35577077 -51100471 - MER5A DNA MER1_type -93 96 4 1269 214 22 106 chr18 35577326 35577444 -51100104 + LTR55 LTR ERV 3 129 -419 3656 173 62 4 chr18 35577444 35578136 -51099412 + MER44D DNA MER2_type 1 604 -1 1269 214 22 106 chr18 35578136 35578595 -51098953 + LTR55 LTR ERV 129 532 -16 237 196 0 0 chr18 35578909 35578960 -51098588 + (TA)n Simple_repeat Simple_repeat 2 52 0 409 148 134 42 chr18 35579442 35579584 -51097964 - L1ME4a LINE L1 -6 6115 5961 510 269 164 32 chr18 35580386 35580605 -51096943 + MIR SINE MIR 12 259 -3 233 246 138 36 chr18 35580622 35580817 -51096731 - L1ME LINE L1 -376 5745 5531 449 305 124 58 chr18 35580948 35581165 -51096383 + L2 LINE L2 2816 3017 -296 315 0 0 0 chr18 35581165 35581200 -51096348 + (CA)n Simple_repeat Simple_repeat 1 35 0 449 305 124 58 chr18 35581200 35581448 -51096100 + L2 LINE L2 3017 3312 -1 1009 292 77 32 chr18 35581774 35582421 -51095127 + HAL1 LINE L1 579 1254 -1253 423 291 73 0 chr18 35582524 35582689 -51094859 + HAL1 LINE L1 1703 1879 -628 549 177 199 13 chr18 35582795 35583021 -51094527 - HsTC2 DNA Tc2 -1 1897 1630 22 35 0 0 chr18 35583864 35583893 -51093655 + AT_rich Low_complexity Low_complexity 1 29 0 704 241 35 35 chr18 35584166 35584456 -51093092 + HAL1 LINE L1 2129 2418 -89 487 378 46 50 chr18 35585284 35585607 -51091941 + L2 LINE L2 2951 3272 0 910 290 89 83 chr18 35585834 35586423 -51091125 - L2 LINE L2 -2 3311 2727 543 125 0 0 chr18 35586423 35586511 -51091037 + L1MA6 LINE L1 6208 6295 -5 910 290 89 83 chr18 35586511 35586746 -51090802 - L2 LINE L2 -586 2727 1050 269 303 45 56 chr18 35586963 35587161 -51090387 - L2 LINE L2 0 3313 3118 23 0 0 0 chr18 35587485 35587508 -51090040 + AT_rich Low_complexity Low_complexity 1 23 0 254 246 140 0 chr18 35587531 35587588 -51089960 + MIR SINE MIR 14 78 -184 445 238 62 88 chr18 35587626 35587819 -51089729 + MIR SINE MIR 72 259 -3 21 0 0 0 chr18 35588598 35588619 -51088929 + AT_rich Low_complexity Low_complexity 1 21 0 1973 192 45 52 chr18 35588624 35589129 -51088419 + MLT1D LTR MaLR 1 502 -3 21 36 0 0 chr18 35589163 35589191 -51088357 + AT_rich Low_complexity Low_complexity 1 28 0 1053 50 14 0 chr18 35589196 35589336 -51088212 - L1P2 LINE L1 -357 5797 5656 1719 52 0 0 chr18 35589336 35589547 -51088001 + L1PA5 LINE L1 5939 6150 -4 2385 203 2 4 chr18 35590017 35590544 -51087004 - L1 LINE L1 -1081 5065 4540 386 174 0 64 chr18 35590542 35590651 -51086897 + L1P LINE L1 5089 5190 -956 * 316 94 0 0 chr18 35590651 35590700 -51086848 + L1PB3 LINE L1 6102 6154 0 2175 67 4 0 chr18 35591103 35591371 -51086177 + AluY SINE Alu 37 305 -6 21 57 0 0 chr18 35591474 35591509 -51086039 + GC_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr18 35591518 35591541 -51086007 + (A)n Simple_repeat Simple_repeat 1 23 0 1047 263 67 6 chr18 35592181 35592512 -51085036 - LTR16C LTR ERVL -7 484 134 419 167 0 0 chr18 35592738 35592804 -51084744 + LTR67 LTR ERVL 113 178 -379 1094 187 42 51 chr18 35593020 35593351 -51084197 - MER45B DNA AcHobo 0 1040 713 1687 315 77 28 chr18 35593452 35594163 -51083385 - MER45C DNA AcHobo -203 750 5 240 86 0 0 chr18 35594214 35594249 -51083299 - L1MA6 LINE L1 -10 6290 6256 837 150 0 0 chr18 35594215 35594355 -51083193 - L1MA4 LINE L1 -11 6289 6150 257 225 75 12 chr18 35594434 35594514 -51083034 - MER69 DNA AcHobo 0 2526 2442 333 232 0 0 chr18 35594516 35594585 -51082963 - MER69 DNA AcHobo -1157 69 1 272 296 53 45 chr18 35594647 35594779 -51082769 + L2 LINE L2 1912 2044 -1270 1328 234 33 17 chr18 35596159 35596518 -51081030 - MLT1A1 LTR MaLR 0 365 1 250 91 0 23 chr18 35596925 35596969 -51080579 - L1PA10 LINE L1 -7 6161 6119 1614 211 3 0 chr18 35597101 35597405 -51080143 + AluJo SINE Alu 1 305 -7 597 90 0 0 chr18 35597852 35597941 -51079607 + (TAGA)n Simple_repeat Simple_repeat 4 92 0 312 27 0 0 chr18 35597948 35597985 -51079563 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 21 82 0 0 chr18 35598721 35598770 -51078778 + AT_rich Low_complexity Low_complexity 1 49 0 1558 215 39 0 chr18 35599999 35600310 -51077238 + MER58B DNA MER1_type 1 323 -18 1434 29 0 0 chr18 35600420 35600593 -51076955 - L1PA2 LINE L1 0 6155 5983 1008 18 0 0 chr18 35600593 35600707 -51076841 + L1P1 LINE L1 5569 5682 -473 630 124 0 0 chr18 35601055 35601176 -51076372 + (GA)n Simple_repeat Simple_repeat 2 122 0 180 250 54 0 chr18 35601855 35601901 -51075647 - MIR SINE MIR -66 196 145 333 0 0 0 chr18 35601901 35601938 -51075610 + (CA)n Simple_repeat Simple_repeat 2 38 0 26 30 0 0 chr18 35601949 35601982 -51075566 + AT_rich Low_complexity Low_complexity 1 33 0 379 279 101 16 chr18 35601996 35602125 -51075423 - MIR SINE MIR -115 147 8 226 315 28 19 chr18 35602339 35602447 -51075101 + L2 LINE L2 2166 2274 -1040 4933 162 17 50 chr18 35603083 35604038 -51073510 + MER49 LTR ERV1 1 923 0 22 35 0 0 chr18 35605787 35605816 -51071732 + AT_rich Low_complexity Low_complexity 1 29 0 2618 195 43 24 chr18 35605947 35606568 -51070980 + LTR27 LTR ERV1 3 635 -1 303 310 76 65 chr18 35606613 35606797 -51070751 + L2 LINE L2 3127 3312 -1 285 261 34 84 chr18 35607113 35607232 -51070316 + MIR SINE MIR 77 189 -73 375 261 122 58 chr18 35607244 35607432 -51070116 + L1MC4a LINE L1 6167 6366 -1442 1577 204 0 0 chr18 35607636 35607921 -51069627 - Tigger3(Golem) DNA MER2_type -2744 285 1 801 224 72 57 chr18 35607944 35608275 -51069273 + L1MC5 LINE L1 7114 7449 -512 1666 166 15 27 chr18 35609003 35609345 -51068203 - L1MA7 LINE L1 -148 6156 5806 906 114 27 7 chr18 35609348 35609497 -51068051 + L1MA7 LINE L1 6134 6285 -6 23 33 0 0 chr18 35609498 35609528 -51068020 + AT_rich Low_complexity Low_complexity 1 30 0 195 298 0 0 chr18 35610451 35610508 -51067040 + L2 LINE L2 3252 3308 -5 1456 198 19 6 chr18 35610930 35611244 -51066304 - L1 LINE L1 -1779 4367 4050 430 261 0 0 chr18 35612778 35612870 -51064678 + Charlie1 DNA MER1_type 7 98 -2663 1529 217 90 42 chr18 35613358 35613792 -51063756 + Charlie1a DNA MER1_type 1 455 -1000 * 2530 256 45 12 chr18 35613768 35614428 -51063120 - MER76 LTR ERV -6 682 1 3612 206 71 23 chr18 35614454 35614756 -51062792 + Charlie1a DNA MER1_type 441 727 -2034 1253 193 61 120 chr18 35614756 35615248 -51062300 + MLT1C LTR MaLR 5 467 0 3612 206 71 23 chr18 35615248 35615913 -51061635 + Charlie1a DNA MER1_type 727 1455 0 203 360 61 9 chr18 35616297 35616411 -51061137 - MER5A DNA MER1_type -53 136 17 3268 229 0 8 chr18 35617219 35617983 -51059565 - L1PB1 LINE L1 -942 5204 4447 6067 90 12 19 chr18 35617983 35618946 -51058602 + L1PB1 LINE L1 5194 6150 -1 352 338 38 0 chr18 35619036 35619193 -51058355 - MIR SINE MIR -14 248 86 25 0 0 0 chr18 35619754 35619779 -51057769 + AT_rich Low_complexity Low_complexity 1 25 0 234 0 0 0 chr18 35619908 35619934 -51057614 + (TA)n Simple_repeat Simple_repeat 2 27 0 2742 7 0 0 chr18 35620048 35620347 -51057201 - AluYa5 SINE Alu -12 299 1 24 0 0 0 chr18 35620348 35620372 -51057176 + AT_rich Low_complexity Low_complexity 1 24 0 280 368 93 16 chr18 35621574 35621767 -51055781 + MIR SINE MIR 34 241 -21 1280 197 168 27 chr18 35621874 35622286 -51055262 + Charlie4a DNA MER1_type 37 506 -2 639 294 17 25 chr18 35622528 35622766 -51054782 + L2 LINE L2 2414 2649 -665 231 229 0 0 chr18 35624644 35624692 -51052856 + U6 snRNA snRNA 17 64 -43 303 245 61 61 chr18 35624706 35624785 -51052763 + L1ME4a LINE L1 5762 5840 -281 2104 89 36 0 chr18 35624785 35625066 -51052482 + AluSp SINE Alu 2 292 -21 303 245 61 61 chr18 35625066 35625149 -51052399 + L1ME4a LINE L1 5839 5924 -197 790 0 40 0 chr18 35625151 35625251 -51052297 + (GAAA)n Simple_repeat Simple_repeat 1 104 0 2575 149 9 19 chr18 35625847 35626276 -51051272 + MSTC LTR MaLR 4 428 0 314 284 118 0 chr18 35626327 35626429 -51051119 + MIR SINE MIR 84 197 -65 301 75 38 0 chr18 35627083 35627136 -51050412 + (TTG)n Simple_repeat Simple_repeat 2 56 0 2100 109 0 16 chr18 35627147 35627460 -51050088 - AluSc SINE Alu -1 308 1 4013 57 0 2 chr18 35627464 35627970 -51049578 - L1PA7 LINE L1 -2 6152 5648 35 29 0 44 chr18 35628542 35628610 -51048938 + AT_rich Low_complexity Low_complexity 1 65 0 373 278 53 0 chr18 35628828 35628961 -51048587 + MIR SINE MIR 16 155 -107 352 248 20 92 chr18 35628982 35629135 -51048413 - L1MCa LINE L1 -4906 1520 1379 3171 266 43 48 chr18 35629147 35630963 -51046585 - L1MEc LINE L1 -2726 4231 2466 203 222 0 28 chr18 35631040 35631112 -51046436 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 616 303 25 32 chr18 35631339 35631616 -51045932 - L1MEc LINE L1 -4612 2526 2252 878 235 60 34 chr18 35631939 35632207 -51045341 - L1MB7 LINE L1 -16 6168 5894 950 267 44 72 chr18 35632211 35632600 -51044948 - L1MEc LINE L1 -6453 406 29 513 273 70 70 chr18 35632936 35633178 -51044370 + MIR SINE MIR 10 251 -11 294 95 0 0 chr18 35634277 35634319 -51043229 + (TA)n Simple_repeat Simple_repeat 1 42 0 207 0 0 0 chr18 35635252 35635275 -51042273 + (T)n Simple_repeat Simple_repeat 1 23 0 23 33 0 0 chr18 35635288 35635318 -51042230 + GC_rich Low_complexity Low_complexity 1 30 0 1946 140 3 29 chr18 35635459 35635774 -51041774 - AluSx SINE Alu -3 309 3 754 276 53 16 chr18 35635844 35636087 -51041461 - MIR SINE MIR 0 262 11 2343 71 3 0 chr18 35638143 35638453 -51039095 - AluY SINE Alu 0 311 1 226 275 25 0 chr18 35638661 35638741 -51038807 + L1M4 LINE L1 5771 5852 -332 200 93 70 0 chr18 35638783 35638826 -51038722 + (TATAA)n Simple_repeat Simple_repeat 4 49 0 3211 209 131 44 chr18 35639043 35640130 -51037418 + Charlie1a DNA MER1_type 47 1227 -228 208 225 0 0 chr18 35640174 35640214 -51037334 + GA-rich Low_complexity Low_complexity 2 41 0 276 235 0 0 chr18 35640887 35640955 -51036593 + GA-rich Low_complexity Low_complexity 3 70 0 322 296 47 70 chr18 35641726 35642027 -51035521 - L1MB7 LINE L1 -2234 5551 5258 2156 97 3 3 chr18 35642096 35642385 -51035163 + AluSx SINE Alu 1 289 -23 308 261 43 0 chr18 35642813 35642882 -51034666 + L2 LINE L2 3136 3207 -65 21 71 0 0 chr18 35643080 35643122 -51034426 + AT_rich Low_complexity Low_complexity 1 42 0 2167 182 88 9 chr18 35643269 35643721 -51033827 + MER6 DNA MER2_type -20 795 -70 31554 102 8 17 chr18 35643721 35647542 -51030006 - L1PA7 LINE L1 -12 6457 2616 188 0 74 0 chr18 35647542 35647569 -51029979 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 31554 102 8 17 chr18 35647569 35649421 -51028127 - L1PA7 LINE L1 -3853 2616 750 2437 122 18 8 chr18 35649423 35649824 -51027724 + MER6 DNA MER2_type 460 864 -1 4835 169 40 59 chr18 35651603 35652067 -51025481 - L1MA7 LINE L1 -40 6251 5780 309 109 0 0 chr18 35652067 35652113 -51025435 + (TG)n Simple_repeat Simple_repeat 2 47 0 4835 169 40 59 chr18 35652113 35652218 -51025330 - L1MA7 LINE L1 -511 5780 5674 270 0 0 0 chr18 35652218 35652248 -51025300 + (TA)n Simple_repeat Simple_repeat 2 31 0 4835 169 40 59 chr18 35652248 35653725 -51023823 - L1MA7 LINE L1 -617 5674 4244 407 299 37 51 chr18 35653763 35653980 -51023568 + MLT1K LTR MaLR 375 588 0 360 180 22 56 chr18 35654053 35654142 -51023406 - L2 LINE L2 0 3313 3228 1157 227 40 11 chr18 35654299 35654577 -51022971 - MLT1C LTR MaLR -3 464 179 351 113 19 0 chr18 35654586 35654639 -51022909 - MLT1C LTR MaLR -413 54 1 248 340 32 11 chr18 35654644 35654738 -51022810 - L2 LINE L2 -219 3053 2958 2790 168 14 6 chr18 35655763 35656256 -51021292 + LOR1a LTR ERV1 1 497 0 1482 197 64 7 chr18 35656352 35656647 -51020901 - AluJo SINE Alu 0 312 1 220 296 78 43 chr18 35656786 35656901 -51020647 - L2 LINE L2 -22 3291 3173 202 304 0 0 chr18 35657158 35657214 -51020334 + L2 LINE L2 3184 3239 -74 203 289 195 8 chr18 35659404 35659532 -51018016 - MIR SINE MIR -38 224 73 229 298 81 43 chr18 35659684 35659848 -51017700 - MIR SINE MIR -56 206 35 2210 82 10 10 chr18 35660066 35660358 -51017190 + AluSx SINE Alu 1 292 -20 21 36 0 0 chr18 35660806 35660834 -51016714 + AT_rich Low_complexity Low_complexity 1 28 0 3650 237 58 17 chr18 35661366 35662566 -51014982 - L1MEc LINE L1 -1941 4274 3025 803 309 70 22 chr18 35662566 35662935 -51014613 - LTR16B LTR ERVL 0 464 78 420 274 50 42 chr18 35663011 35663252 -51014296 - HERV16 LTR ERVL 0 4996 4754 487 301 50 26 chr18 35663393 35663844 -51013704 - HERV16 LTR ERVL -301 5026 4535 752 317 27 8 chr18 35664261 35664523 -51013025 - LTR16B LTR ERVL -2 462 196 551 207 23 129 chr18 35664586 35664803 -51012745 + LTR40a LTR ERVL 326 519 0 2188 243 57 20 chr18 35664863 35665831 -51011717 - L1MEc LINE L1 -3196 3019 2045 525 318 88 13 chr18 35665977 35666295 -51011253 - L1MEc LINE L1 -6013 383 42 435 336 60 25 chr18 35666435 35666801 -51010747 - L1ME4a LINE L1 -165 5956 5578 300 91 0 0 chr18 35667453 35667497 -51010051 + (GA)n Simple_repeat Simple_repeat 2 45 0 599 253 6 52 chr18 35667819 35667993 -51009555 - L2 LINE L2 0 3313 3148 2002 231 105 96 chr18 35667994 35668642 -51008906 + MLT1E3 LTR MaLR 1 624 0 360 254 114 72 chr18 35668642 35668878 -51008670 - L2 LINE L2 -162 3151 2906 180 217 0 0 chr18 35669002 35669048 -51008500 + CT-rich Low_complexity Low_complexity 3 48 0 644 313 103 55 chr18 35669051 35669894 -51007654 - L2 LINE L2 -2 3311 2406 2094 129 3 3 chr18 35670225 35670520 -51007028 - AluSx SINE Alu -17 295 1 3882 153 47 32 chr18 35670549 35670855 -51006693 - Tigger1 DNA MER2_type 0 2418 2118 1485 175 13 70 chr18 35670855 35671170 -51006378 - AluJo SINE Alu -15 297 1 3882 153 47 32 chr18 35671170 35671591 -51005957 - Tigger1 DNA MER2_type -300 2118 1680 8895 142 48 2 chr18 35671598 35672782 -51004766 - Tigger1 DNA MER2_type -880 1538 271 4398 126 4 17 chr18 35672782 35673495 -51004053 + L1PA15 LINE L1 5460 6163 -2 8895 142 48 2 chr18 35673495 35673779 -51003769 - Tigger1 DNA MER2_type -2147 271 2 1287 215 68 104 chr18 35673991 35674096 -51003452 + L1MC5 LINE L1 6624 6731 -1230 195 42 0 0 chr18 35674096 35674120 -51003428 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1287 215 68 104 chr18 35674120 35674419 -51003129 + L1MC5 LINE L1 6731 6995 -966 2153 123 0 0 chr18 35674419 35674711 -51002837 + AluSc SINE Alu 1 292 -17 1287 215 68 104 chr18 35674711 35674985 -51002563 + L1MC5 LINE L1 6995 7278 -683 2251 42 0 0 chr18 35674987 35675272 -51002276 - L1P LINE L1 -851 5295 5011 6589 48 1 1 chr18 35675273 35676086 -51001462 + L1PA5 LINE L1 5337 6149 -5 1479 221 122 36 chr18 35676101 35676738 -51000810 + L1MC5 LINE L1 7262 7953 -8 2805 0 0 0 chr18 35676961 35677260 -51000288 - AluYa5 SINE Alu -12 299 1 1055 258 175 18 chr18 35677310 35677756 -50999792 - LTR33 LTR ERVL -5 516 1 288 0 0 0 chr18 35677900 35677932 -50999616 + (TG)n Simple_repeat Simple_repeat 2 33 0 473 268 46 86 chr18 35678014 35678235 -50999313 + L1MC/D LINE L1 5350 5564 -780 2015 201 4 50 chr18 35678235 35678697 -50998851 - MER41B LTR ERV1 -33 602 162 376 264 112 16 chr18 35678813 35678938 -50998610 + MIR SINE MIR 1 137 -125 318 149 45 30 chr18 35678945 35679012 -50998536 + MIR SINE MIR 101 168 -94 245 207 46 46 chr18 35679313 35679400 -50998148 + HAL1b LINE L1 1187 1273 -75 24 0 0 0 chr18 35680165 35680189 -50997359 + AT_rich Low_complexity Low_complexity 1 24 0 2552 100 14 3 chr18 35680323 35680683 -50996865 + THE1B LTR MaLR 1 364 0 28 0 0 0 chr18 35680964 35680992 -50996556 + AT_rich Low_complexity Low_complexity 1 28 0 1765 170 29 32 chr18 35682083 35682459 -50995089 - THE1C LTR MaLR 0 375 1 9646 129 31 24 chr18 35682459 35684028 -50993520 - THE1C-int LTR MaLR 0 1580 1 1843 139 70 25 chr18 35684028 35684387 -50993161 - THE1C LTR MaLR 0 375 1 22 99 0 0 chr18 35684438 35684509 -50993039 + AT_rich Low_complexity Low_complexity 1 71 0 558 201 7 7 chr18 35685128 35685267 -50992281 + L1MB8 LINE L1 1259 1397 -5145 1528 208 24 10 chr18 35685279 35685697 -50991851 + L1MB8 LINE L1 3124 3547 -3097 * 5012 199 43 13 chr18 35685673 35687649 -50989899 + L1MB8 LINE L1 4638 6670 -6 638 306 106 0 chr18 35687781 35688056 -50989492 - L1ME3 LINE L1 -48 6114 5811 3022 220 81 3 chr18 35688057 35688788 -50988760 - L1MC3 LINE L1 -167 7618 6831 306 51 17 51 chr18 35688790 35688849 -50988699 - L1PA16 LINE L1 0 6166 6110 2003 138 12 9 chr18 35688853 35689187 -50988361 - L1PA16 LINE L1 -104 6062 5728 2183 157 35 59 chr18 35689187 35689772 -50987776 + MLT2A2 LTR ERVL 1 554 0 5191 177 24 4 chr18 35689772 35691295 -50986253 - L1P4 LINE L1 -434 5732 4181 1686 159 0 0 chr18 35691281 35691551 -50985997 - L1MC3 LINE L1 -934 6851 6582 * 1431 229 139 16 chr18 35691551 35691997 -50985551 - MLT1D LTR MaLR 0 505 5 1821 188 57 11 chr18 35691999 35692367 -50985181 + MLT1B LTR MaLR 6 390 0 3762 206 69 8 chr18 35692375 35693247 -50984301 - L1MC3 LINE L1 -1198 6587 5663 946 288 7 3 chr18 35693250 35693552 -50983996 - L1M4 LINE L1 -2476 3670 3368 1351 256 33 48 chr18 35693558 35693953 -50983595 - L1MCb LINE L1 -5444 601 213 3024 131 45 0 chr18 35693979 35694506 -50983042 - L1MA7 LINE L1 0 6291 5741 284 268 134 45 chr18 35694511 35694577 -50982971 - L1MCb LINE L1 -6282 282 217 817 187 15 22 chr18 35694577 35694794 -50982754 - L1ME3 LINE L1 -293 5872 -257 1537 101 39 0 chr18 35695692 35695949 -50981599 + L1MA4 LINE L1 6028 6294 -6 477 0 0 0 chr18 35696150 35696203 -50981345 + (CA)n Simple_repeat Simple_repeat 2 54 0 202 361 0 0 chr18 35696622 35696683 -50980865 + L3 LINE CR1 1514 1574 -3 260 391 118 27 chr18 35696718 35697385 -50980163 - L2 LINE L2 -338 2976 2249 236 289 66 0 chr18 35697956 35698032 -50979516 + MIR3 SINE MIR 118 198 -10 527 125 0 0 chr18 35698176 35698256 -50979292 - MADE1 DNA Mariner 0 80 1 709 224 164 0 chr18 35698401 35698553 -50978995 + MER5A DNA MER1_type 13 189 0 255 266 51 0 chr18 35699780 35699859 -50977689 + L1ME LINE L1 137 219 -5986 1666 288 51 21 chr18 35700051 35700715 -50976833 + L1ME LINE L1 225 908 -5297 992 65 0 43 chr18 35700717 35700856 -50976692 + AluSg/x SINE Alu 172 304 -6 568 254 20 66 chr18 35700869 35701076 -50976472 + L1ME LINE L1 914 1096 -5119 1491 196 39 21 chr18 35701076 35701361 -50976187 + AluJb SINE Alu 6 295 -17 568 254 20 66 chr18 35701361 35701546 -50976002 + L1ME LINE L1 1096 1288 -4927 356 47 0 0 chr18 35701660 35701703 -50975845 + tRNA-Gln-CAG tRNA tRNA 1 43 -32 943 280 65 19 chr18 35701703 35701803 -50975745 + L1ME LINE L1 1790 1884 -4512 2384 159 26 28 chr18 35701803 35702261 -50975287 + MSTB2 LTR MaLR 1 457 0 943 280 65 19 chr18 35702261 35702682 -50974866 + L1ME LINE L1 1884 2335 -4061 254 132 0 132 chr18 35702681 35702757 -50974791 + L1ME LINE L1 3263 3328 -2887 * 207 0 0 0 chr18 35702764 35702787 -50974761 + (GA)n Simple_repeat Simple_repeat 2 24 0 376 246 29 22 chr18 35702814 35702952 -50974596 + L1ME2 LINE L1 2390 2528 -3618 1061 244 120 59 chr18 35702955 35703470 -50974078 + MLT1F1 LTR MaLR 1 562 -5 1885 239 42 14 chr18 35703478 35704184 -50973364 + L1ME2 LINE L1 2530 3255 -2891 1470 221 64 43 chr18 35704236 35704706 -50972842 + L1ME2 LINE L1 5642 6121 -43 241 377 0 14 chr18 35704706 35704844 -50972704 + GA-rich Low_complexity Low_complexity 4 139 0 250 248 139 47 chr18 35705201 35705330 -50972218 + L1MC5 LINE L1 7721 7861 -100 2297 108 0 0 chr18 35705377 35705682 -50971866 + AluSq SINE Alu 1 305 -8 800 222 7 0 chr18 35707166 35707310 -50970238 - FRAM SINE Alu -33 143 1 423 0 0 0 chr18 35708871 35708918 -50968630 + (CA)n Simple_repeat Simple_repeat 2 48 0 27 0 0 0 chr18 35711111 35711138 -50966410 + AT_rich Low_complexity Low_complexity 1 27 0 238 346 0 19 chr18 35711514 35711618 -50965930 + CT-rich Low_complexity Low_complexity 3 104 0 22 0 0 0 chr18 35712754 35712776 -50964772 + AT_rich Low_complexity Low_complexity 1 22 0 221 56 0 28 chr18 35712967 35713003 -50964545 + (TG)n Simple_repeat Simple_repeat 1 35 0 183 91 0 73 chr18 35713356 35713411 -50964137 + (CAAAAA)n Simple_repeat Simple_repeat 4 54 0 27 29 0 0 chr18 35714142 35714176 -50963372 + GC_rich Low_complexity Low_complexity 1 34 0 542 288 13 0 chr18 35714746 35714899 -50962649 - MIR SINE MIR -41 221 67 450 0 0 0 chr18 35715998 35716048 -50961500 + (CA)n Simple_repeat Simple_repeat 2 51 0 524 346 58 8 chr18 35717157 35717400 -50960148 - MIR SINE MIR -3 259 5 1079 89 0 0 chr18 35717801 35717936 -50959612 + AluSq/x SINE Alu 1 135 -177 2133 76 0 59 chr18 35717936 35718292 -50959256 + AluY SINE Alu 1 338 0 4602 166 54 28 chr18 35718711 35719711 -50957837 - L1MD1 LINE L1 -2 6634 5616 3655 241 44 31 chr18 35719771 35720234 -50957314 - L1MD1 LINE L1 -1402 5138 4683 204 40 0 0 chr18 35720234 35720259 -50957289 + (TG)n Simple_repeat Simple_repeat 2 26 0 3655 241 44 31 chr18 35720259 35720274 -50957274 - L1MD1 LINE L1 -1857 4683 4670 2137 114 0 0 chr18 35720274 35720572 -50956976 - AluSx SINE Alu -14 298 1 451 162 30 0 chr18 35720579 35720678 -50956870 - L1MA7 LINE L1 -3 6288 6187 3655 241 44 31 chr18 35720678 35721424 -50956124 - L1MD1 LINE L1 -1875 4665 3889 1897 136 10 108 chr18 35721458 35721876 -50955672 - MLT1B LTR MaLR 0 390 14 9881 210 57 31 chr18 35721881 35723088 -50954460 - L1MD1 LINE L1 -2697 3843 2669 2393 79 10 7 chr18 35723088 35723392 -50954156 - AluY SINE Alu -6 305 1 9881 210 57 31 chr18 35723392 35723635 -50953913 - L1MD1 LINE L1 -3871 2669 2434 2123 76 3 94 chr18 35723635 35723964 -50953584 - AluY SINE Alu -12 299 1 9881 210 57 31 chr18 35723964 35724801 -50952747 - L1MD1 LINE L1 -4106 2434 1620 1508 219 81 59 chr18 35724801 35725295 -50952253 - MLT1D LTR MaLR 0 505 1 9881 210 57 31 chr18 35725295 35726719 -50950829 - L1MD1 LINE L1 -4920 1620 18 689 220 55 16 chr18 35727477 35727659 -50949889 + MER5A DNA MER1_type 1 189 0 183 91 0 73 chr18 35729524 35729579 -50947969 + (TTTTTG)n Simple_repeat Simple_repeat 4 54 0 277 364 136 0 chr18 35729994 35730112 -50947436 + L2 LINE L2 3137 3270 -2 266 227 15 15 chr18 35730267 35730333 -50947215 + MER5B DNA MER1_type 86 151 -27 522 320 108 5 chr18 35730540 35730743 -50946805 - MIR SINE MIR -19 243 20 278 348 139 19 chr18 35730753 35730911 -50946637 + MER5B DNA MER1_type 1 177 -1 786 170 0 14 chr18 35731048 35731189 -50946359 + FLAM_C SINE Alu 3 141 -2 409 199 128 50 chr18 35731716 35731857 -50945691 - MER5B DNA MER1_type -5 173 22 557 271 121 24 chr18 35731969 35732176 -50945372 - MIR SINE MIR -17 245 19 426 336 93 9 chr18 35732450 35732678 -50944870 + MIR SINE MIR 16 256 -6 1772 158 52 18 chr18 35733157 35733542 -50944006 - L1MA8 LINE L1 -3 6288 5891 213 39 0 0 chr18 35734214 35734240 -50943308 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1038 196 8 51 chr18 35734248 35734483 -50943065 - AluJo SINE Alu -44 268 44 1877 156 24 0 chr18 35736025 35736346 -50941202 - AluSx SINE Alu 0 312 1 848 240 147 26 chr18 35736681 35737027 -50940521 - L1MCc LINE L1 -3608 3333 2946 6047 131 16 29 chr18 35737041 35738461 -50939087 - L1PB1 LINE L1 -1 6150 4747 1450 272 62 75 chr18 35738459 35740060 -50937488 - L1MCc LINE L1 -4131 2991 1213 * 268 311 32 99 chr18 35740361 35740551 -50936997 - L1MCc LINE L1 -5956 467 316 2234 64 3 14 chr18 35740551 35740877 -50936671 + AluY SINE Alu 1 323 0 268 311 32 99 chr18 35740877 35741090 -50936458 - L1MCc LINE L1 -6107 316 90 2282 90 0 10 chr18 35741209 35741509 -50936039 - AluSc SINE Alu -12 297 1 1392 280 134 64 chr18 35741509 35742152 -50935396 - MER115 DNA AcHobo -5 688 1 2271 254 119 104 chr18 35743022 35745493 -50932055 + HAL1 LINE L1 1 2507 0 571 216 244 69 chr18 35745793 35746112 -50931436 + MSTB2 LTR MaLR 1 375 -82 1122 141 9 88 chr18 35746554 35746781 -50930767 - AluJo SINE Alu -17 295 87 26 50 0 0 chr18 35747099 35747139 -50930409 + AT_rich Low_complexity Low_complexity 1 40 0 330 302 108 0 chr18 35747150 35747289 -50930259 - MIR SINE MIR -44 218 65 528 264 36 0 chr18 35747411 35747521 -50930027 - MER81 DNA DNA 0 114 1 198 0 0 0 chr18 35748274 35748296 -50929252 + (TG)n Simple_repeat Simple_repeat 2 23 0 248 141 87 22 chr18 35748550 35748642 -50928906 + (TTATA)n Simple_repeat Simple_repeat 4 101 0 2548 192 45 62 chr18 35748783 35748948 -50928600 - L1MA9 LINE L1 -36 6276 6110 2000 110 0 4 chr18 35748948 35749220 -50928328 + AluY SINE Alu 35 305 -6 2548 192 45 62 chr18 35749220 35749727 -50927821 - L1MA9 LINE L1 -202 6110 5616 183 80 0 0 chr18 35750784 35750809 -50926739 + (CATA)n Simple_repeat Simple_repeat 4 28 0 226 200 113 75 chr18 35751002 35751082 -50926466 - L2 LINE L2 -5 3267 3185 21 0 0 0 chr18 35751903 35751924 -50925624 + AT_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr18 35752055 35752094 -50925454 + (CA)n Simple_repeat Simple_repeat 2 40 0 295 309 24 85 chr18 35755140 35755434 -50922114 - L1MEd LINE L1 -5283 836 561 246 62 0 0 chr18 35755804 35755836 -50921712 + (TTTTG)n Simple_repeat Simple_repeat 4 35 0 1771 133 0 33 chr18 35755836 35756106 -50921442 - AluSx SINE Alu -51 261 1 2664 74 8 0 chr18 35756445 35756797 -50920751 - L1PA7 LINE L1 -2 6152 5798 199 345 46 88 chr18 35756954 35757215 -50920333 + L2 LINE L2 2556 2805 -509 192 304 148 9 chr18 35757480 35757595 -50919953 + L2 LINE L2 3142 3272 0 180 111 0 0 chr18 35757792 35757819 -50919729 + (T)n Simple_repeat Simple_repeat 1 27 0 2351 72 3 10 chr18 35758170 35758463 -50919085 + AluY SINE Alu 1 291 -20 2019 130 27 3 chr18 35759264 35759565 -50917983 - AluSx SINE Alu -4 308 1 27 49 0 0 chr18 35759798 35759839 -50917709 + AT_rich Low_complexity Low_complexity 1 41 0 277 306 20 10 chr18 35760381 35760479 -50917069 - MLT1I LTR MaLR -33 376 278 473 244 8 41 chr18 35760486 35760609 -50916939 - MLT1I LTR MaLR -243 166 48 * 2750 164 25 15 chr18 35760605 35761080 -50916468 - MER66B LTR ERV1 -6 480 1 548 273 26 0 chr18 35761931 35762085 -50915463 - MER103 DNA DNA -8 158 1 192 40 0 0 chr18 35762093 35762118 -50915430 + (TAGA)n Simple_repeat Simple_repeat 4 28 0 1133 148 83 138 chr18 35762188 35762317 -50915231 + AluJo SINE Alu 6 141 -171 1986 118 24 0 chr18 35762317 35762614 -50914934 + AluSg SINE Alu 1 304 -6 180 0 0 0 chr18 35762616 35762636 -50914912 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1133 148 83 138 chr18 35762636 35762828 -50914720 + AluJo SINE Alu 142 312 0 27 0 0 0 chr18 35762833 35762860 -50914688 + AT_rich Low_complexity Low_complexity 1 27 0 332 171 37 0 chr18 35763005 35763087 -50914461 - L1MB4 LINE L1 -1 6179 6095 360 0 0 0 chr18 35765221 35765261 -50912287 + (CA)n Simple_repeat Simple_repeat 1 40 0 353 355 99 25 chr18 35766144 35766523 -50911025 - L2 LINE L2 -92 3180 2767 2468 63 0 0 chr18 35768830 35769131 -50908417 - AluY SINE Alu -10 301 1 21 0 0 0 chr18 35769608 35769629 -50907919 + AT_rich Low_complexity Low_complexity 1 21 0 219 288 51 9 chr18 35769909 35770019 -50907529 - MIR SINE MIR -64 144 30 371 271 102 8 chr18 35770329 35770447 -50907101 + MIR SINE MIR 79 207 -55 187 276 35 23 chr18 35771272 35771359 -50906189 + MIR SINE MIR 28 115 -147 13536 147 11 14 chr18 35772515 35774589 -50902959 + Tigger1 DNA MER2_type 1 2069 -349 2183 154 72 12 chr18 35774589 35774991 -50902557 - MSTB LTR MaLR 0 426 1 13536 147 11 14 chr18 35774991 35775147 -50902401 + Tigger1 DNA MER2_type 2069 2224 -194 3917 147 7 40 chr18 35775148 35775830 -50901718 - L1PA15 LINE L1 -6 6159 5500 1067 211 8 4 chr18 35775830 35776077 -50901471 + L1P LINE L1 5024 5271 -875 5946 209 9 2 chr18 35776088 35777327 -50900221 - L1PA15 LINE L1 -1364 4782 3536 1247 145 10 0 chr18 35777327 35777527 -50900021 + Tigger1 DNA MER2_type 2217 2418 0 320 296 143 27 chr18 35777635 35777772 -50899776 - MIR3 SINE MIR -11 197 49 223 288 245 0 chr18 35778387 35778526 -50899022 - L2 LINE L2 -1 3312 3140 1377 344 71 41 chr18 35778785 35779992 -50897556 - L2 LINE L2 -460 2854 1612 2388 126 78 5 chr18 35780064 35780462 -50897086 - MSTA LTR MaLR -1 427 1 319 115 67 10 chr18 35780728 35780832 -50896716 + (TA)n Simple_repeat Simple_repeat 2 111 0 3180 138 40 7 chr18 35780956 35781529 -50896019 + L1MA8 LINE L1 5688 6279 -12 1758 121 77 6 chr18 35781540 35781863 -50895685 + L1MA8 LINE L1 5939 6284 -7 2445 185 30 65 chr18 35782020 35782594 -50894954 + MLT2B3 LTR ERVL 1 554 0 280 250 24 24 chr18 35783228 35783312 -50894236 - L2 LINE L2 0 3313 3230 181 311 44 33 chr18 35784271 35784361 -50893187 - L2 LINE L2 -49 3223 3133 2024 121 0 53 chr18 35784444 35784622 -50892926 - AluSx SINE Alu -6 306 151 2171 96 27 7 chr18 35784622 35784915 -50892633 - AluSx SINE Alu -13 299 1 2024 121 0 53 chr18 35784915 35785059 -50892489 - AluSx SINE Alu -161 151 1 224 336 153 17 chr18 35786083 35786324 -50891224 + L3 LINE CR1 178 451 -1126 807 144 0 0 chr18 35787558 35787676 -50889872 - FLAM_C SINE Alu -24 119 2 22 35 0 0 chr18 35788620 35788649 -50888899 + AT_rich Low_complexity Low_complexity 1 29 0 185 393 75 28 chr18 35789364 35789899 -50887649 + L2 LINE L2 247 806 -2508 431 317 161 28 chr18 35790082 35790624 -50886924 - L2 LINE L2 -634 2680 2067 269 232 14 14 chr18 35790658 35790722 -50886826 - MIR SINE MIR 0 262 199 519 305 133 13 chr18 35790722 35790955 -50886593 + MIR SINE MIR 2 262 0 268 277 20 20 chr18 35790947 35791048 -50886500 - MIR SINE MIR -57 205 105 * 232 241 17 26 chr18 35791618 35791734 -50885814 + (TTTAA)n Simple_repeat Simple_repeat 1 115 0 573 219 73 8 chr18 35792522 35792645 -50884903 - MIR SINE MIR -103 159 29 2050 171 65 15 chr18 35793809 35794282 -50883266 - Charlie1a DNA MER1_type -1 1454 958 755 115 149 0 chr18 35794292 35794440 -50883108 - L1MA8 LINE L1 -7 6284 6115 415 225 124 8 chr18 35794441 35794570 -50882978 - Charlie1a DNA MER1_type -1228 227 84 2877 138 47 0 chr18 35794570 35795056 -50882492 - L1MA8 LINE L1 -237 6054 5546 3655 211 35 60 chr18 35795058 35795742 -50881806 - Charlie1a DNA MER1_type -1787 974 321 1655 110 127 8 chr18 35795742 35795987 -50881561 - AluSg SINE Alu -22 288 15 3655 211 35 60 chr18 35795987 35796295 -50881253 - Charlie1a DNA MER1_type -2440 321 7 741 311 60 16 chr18 35797838 35798086 -50879462 - MIR SINE MIR -2 260 2 238 254 91 97 chr18 35798368 35798420 -50879128 - L2 LINE L2 0 3313 3262 2180 121 3 0 chr18 35798420 35798727 -50878821 - AluSp SINE Alu -5 308 1 238 254 91 97 chr18 35798727 35798765 -50878783 - L2 LINE L2 -51 3262 3225 1042 179 9 36 chr18 35798765 35798989 -50878559 - MER20 DNA MER1_type 0 219 2 238 254 91 97 chr18 35798989 35799062 -50878486 - L2 LINE L2 -88 3225 3150 180 288 91 30 chr18 35800132 35800198 -50877350 - L2 LINE L2 -1 3271 3202 25 0 0 0 chr18 35800660 35800685 -50876863 + AT_rich Low_complexity Low_complexity 1 25 0 404 286 52 32 chr18 35801019 35801173 -50876375 - L3 LINE CR1 -239 1338 1182 422 78 0 16 chr18 35802072 35802136 -50875412 + (TTCC)n Simple_repeat Simple_repeat 2 64 0 2232 114 3 0 chr18 35802136 35802443 -50875105 - AluSc SINE Alu -1 308 1 22 0 0 0 chr18 35803656 35803678 -50873870 + AT_rich Low_complexity Low_complexity 1 22 0 2287 91 0 26 chr18 35806291 35806600 -50870948 - AluSc SINE Alu -8 301 1 767 264 104 17 chr18 35806852 35807151 -50870397 - MLT1J2 LTR MaLR -92 358 34 196 274 16 0 chr18 35807299 35807361 -50870187 - L2 LINE L2 -98 3215 3153 306 269 15 0 chr18 35807410 35807477 -50870071 + L2 LINE L2 3246 3313 0 618 344 54 38 chr18 35807548 35808102 -50869446 - L2 LINE L2 -195 3077 2520 22 35 0 0 chr18 35809092 35809121 -50868427 + AT_rich Low_complexity Low_complexity 1 29 0 186 171 0 0 chr18 35809968 35810009 -50867539 + (TG)n Simple_repeat Simple_repeat 2 42 0 219 250 100 0 chr18 35810206 35810266 -50867282 - L2 LINE L2 -7 3265 3200 417 274 26 0 chr18 35810856 35810969 -50866579 + MIR SINE MIR 147 262 0 369 376 76 21 chr18 35811121 35811368 -50866180 - L2 LINE L2 -1 3271 3004 1829 178 0 7 chr18 35811368 35811672 -50865876 + AluJo SINE Alu 1 302 -10 369 376 76 21 chr18 35811672 35811714 -50865834 - L2 LINE L2 -268 3004 2966 287 271 26 84 chr18 35811745 35811900 -50865648 - L2 LINE L2 -252 3020 2875 226 261 0 0 chr18 35812082 35812128 -50865420 - L2 LINE L2 -8 3264 3219 188 211 14 99 chr18 35812154 35812225 -50865323 - L2 LINE L2 0 3313 3249 2218 136 3 0 chr18 35813127 35813436 -50864112 + AluSx SINE Alu 1 310 -2 254 318 36 0 chr18 35813923 35814033 -50863515 - MIR SINE MIR -26 236 123 2328 92 3 0 chr18 35814320 35814613 -50862935 - AluSx SINE Alu -18 294 1 1867 174 7 3 chr18 35816458 35816762 -50860786 - AluSx SINE Alu -7 305 1 24 53 0 0 chr18 35817165 35817203 -50860345 + AT_rich Low_complexity Low_complexity 1 38 0 1684 191 7 7 chr18 35817931 35818230 -50859318 - AluSx SINE Alu -4 308 10 209 200 0 0 chr18 35818667 35818702 -50858846 + (TG)n Simple_repeat Simple_repeat 2 36 0 1691 148 22 3 chr18 35818744 35819061 -50858487 - MER33 DNA MER1_type -1 323 1 357 93 0 0 chr18 35819190 35819244 -50858304 + (CA)n Simple_repeat Simple_repeat 2 55 0 5171 121 59 17 chr18 35819767 35820634 -50856914 + MER4D LTR ERV1 1 903 0 442 287 96 76 chr18 35821467 35821875 -50855673 + Charlie8 DNA MER1_type 87 502 -1915 209 222 37 19 chr18 35822302 35822356 -50855192 - MIR SINE MIR 0 262 208 3863 211 91 27 chr18 35822460 35822730 -50854818 + Charlie1a DNA MER1_type 45 296 -2465 1853 162 0 34 chr18 35822730 35823051 -50854497 - AluJo SINE Alu -2 310 1 3863 211 91 27 chr18 35823051 35823971 -50853577 + Charlie1a DNA MER1_type 296 1311 -144 469 135 0 39 chr18 35824342 35824446 -50853102 + Charlie1a DNA MER1_type 1302 1401 -54 190 77 0 51 chr18 35824544 35824583 -50852965 + (TTC)n Simple_repeat Simple_repeat 2 38 0 40235 52 8 2 chr18 35825016 35831114 -50846434 - L1PA4 LINE L1 -7 6148 13 189 175 0 0 chr18 35831323 35831363 -50846185 + CT-rich Low_complexity Low_complexity 4 43 0 328 257 86 77 chr18 35832333 35832555 -50844993 + L1ME4a LINE L1 5892 6115 -6 1490 153 6 97 chr18 35832672 35832845 -50844703 - AluJb SINE Alu -11 301 169 192 40 0 0 chr18 35832845 35832870 -50844678 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1490 153 6 97 chr18 35832870 35833016 -50844532 - AluJb SINE Alu -143 169 11 204 284 95 32 chr18 35834300 35834395 -50843153 - L2 LINE L2 -2 3270 3170 194 273 45 30 chr18 35834584 35834650 -50842898 + L3 LINE CR1 1279 1345 -232 951 160 41 41 chr18 35834688 35834907 -50842641 - MER20 DNA MER1_type 0 219 1 536 259 82 7 chr18 35835379 35835514 -50842034 - L2 LINE L2 -1 3312 3168 437 282 82 26 chr18 35835742 35835937 -50841611 - L3 LINE CR1 -95 1482 1277 1808 164 3 7 chr18 35836138 35836424 -50841124 + AluJo SINE Alu 1 285 -27 24 0 0 0 chr18 35837210 35837234 -50840314 + AT_rich Low_complexity Low_complexity 1 24 0 1798 148 136 0 chr18 35837469 35837799 -50839749 - THE1C LTR MaLR 0 375 1 333 280 50 0 chr18 35838749 35838849 -50838699 + MIR SINE MIR 40 144 -64 22 56 0 0 chr18 35839515 35839551 -50837997 + AT_rich Low_complexity Low_complexity 1 36 0 638 261 54 25 chr18 35840556 35840797 -50836751 + LTR33A LTR ERVL 273 520 -3 692 243 98 8 chr18 35840951 35841186 -50836362 - L1ME3A LINE L1 -13 6157 5902 5289 150 64 7 chr18 35841205 35841278 -50836270 - L1MC1 LINE L1 -8 6325 6258 391 18 36 0 chr18 35841278 35841334 -50836214 + (CA)n Simple_repeat Simple_repeat 2 59 0 5289 150 64 7 chr18 35841334 35841903 -50835645 - L1MC1 LINE L1 -75 6258 5723 421 57 143 0 chr18 35841903 35841973 -50835575 + MADE1 DNA Mariner 1 80 0 5289 150 64 7 chr18 35841973 35842430 -50835118 - L1MC1 LINE L1 -610 5723 5164 23 0 0 0 chr18 35842581 35842604 -50834944 + AT_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr18 35843411 35843440 -50834108 + AT_rich Low_complexity Low_complexity 1 29 0 1216 81 46 0 chr18 35843722 35843895 -50833653 - MLT2A2 LTR ERVL -272 181 1 378 206 140 52 chr18 35843895 35844028 -50833520 - MLT1C LTR MaLR -306 161 17 1179 218 94 54 chr18 35844032 35844084 -50833464 - MLT2B1 LTR ERVL 0 464 416 180 0 0 0 chr18 35844084 35844104 -50833444 + (CA)n Simple_repeat Simple_repeat 1 20 0 1179 218 94 54 chr18 35844104 35844506 -50833042 - MLT2B1 LTR ERVL -48 416 1 195 100 0 0 chr18 35844770 35844800 -50832748 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 865 354 106 26 chr18 35845172 35846002 -50831546 + L2 LINE L2 763 1658 -1656 308 137 0 0 chr18 35846235 35846286 -50831262 + MLT2A2 LTR ERVL 391 441 -12 1061 226 26 23 chr18 35846294 35846604 -50830944 + MLT1C LTR MaLR 157 467 0 504 294 51 40 chr18 35847488 35847665 -50829883 + MIR SINE MIR 16 190 -61 1013 229 19 0 chr18 35847729 35847943 -50829605 - MER20 DNA MER1_type -1 218 1 2335 90 0 3 chr18 35848242 35848542 -50829006 - AluSc SINE Alu -10 299 1 351 0 0 0 chr18 35851053 35851092 -50826456 + (CA)n Simple_repeat Simple_repeat 2 40 0 212 319 0 14 chr18 35851567 35851636 -50825912 + L2 LINE L2 3190 3257 -15 189 0 0 0 chr18 35851640 35851661 -50825887 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 502 264 52 35 chr18 35852353 35852527 -50825021 + MIR SINE MIR 58 234 -28 187 325 90 32 chr18 35853020 35853208 -50824340 - L2 LINE L2 -267 3005 2807 304 176 14 4 chr18 35853394 35853466 -50824082 - MIR SINE MIR -63 145 73 733 297 96 4 chr18 35853754 35853993 -50823555 + MIR SINE MIR 2 262 0 233 316 0 51 chr18 35854014 35854093 -50823455 - L2 LINE L2 -10 3262 3188 30160 108 11 56 chr18 35854230 35860646 -50816902 + L1PA7 LINE L1 12 6130 -24 202 378 10 0 chr18 35860748 35860846 -50816702 + L2 LINE L2 1959 2057 -1257 843 300 171 21 chr18 35860899 35861645 -50815903 + L2 LINE L2 2186 3046 -267 185 261 109 43 chr18 35862785 35862877 -50814671 - L3b LINE CR1 -269 1314 1217 289 183 0 134 chr18 35864934 35865016 -50812532 + MIR SINE MIR 84 141 -67 509 261 72 36 chr18 35865074 35865296 -50812252 + L1ME4a LINE L1 5621 5850 -271 2269 92 3 3 chr18 35865355 35865648 -50811900 - AluSp SINE Alu -20 293 1 1331 82 6 6 chr18 35865751 35865922 -50811626 - AluSp SINE Alu -142 171 1 373 233 26 0 chr18 35865940 35866056 -50811492 + L1ME4a LINE L1 5979 6097 -24 22 35 0 0 chr18 35866145 35866174 -50811374 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr18 35866671 35866694 -50810854 + AT_rich Low_complexity Low_complexity 1 23 0 637 249 124 26 chr18 35868461 35868699 -50808849 - MIR SINE MIR 0 262 3 215 381 48 16 chr18 35868843 35868969 -50808579 - L2 LINE L2 -27 3245 3116 312 48 0 0 chr18 35870334 35870376 -50807172 + (TG)n Simple_repeat Simple_repeat 2 43 0 202 200 0 0 chr18 35872823 35872858 -50804690 + (ATG)n Simple_repeat Simple_repeat 2 36 0 3945 22 32 0 chr18 35873117 35873618 -50803930 - L1PA2 LINE L1 -1302 4844 4328 7362 18 31 1 chr18 35873618 35874892 -50802656 + L1PA2 LINE L1 4852 6151 -4 45 34 0 0 chr18 35875131 35875190 -50802358 + AT_rich Low_complexity Low_complexity 1 59 0 350 272 43 54 chr18 35875642 35875826 -50801722 + L1ME LINE L1 5481 5662 -459 2277 97 0 10 chr18 35875955 35876263 -50801285 + AluSq SINE Alu 1 305 -8 22 70 0 0 chr18 35876411 35876454 -50801094 + AT_rich Low_complexity Low_complexity 1 43 0 870 190 39 0 chr18 35876799 35876978 -50800570 + MER3 DNA MER1_type 21 206 -3 233 220 51 0 chr18 35878594 35878653 -50798895 - MIR SINE MIR -17 245 184 2087 114 0 51 chr18 35878725 35879041 -50798507 + AluSx SINE Alu 5 304 -8 562 223 25 0 chr18 35879062 35879183 -50798365 - MIR SINE MIR -75 187 64 284 229 29 0 chr18 35879254 35879324 -50798224 + MIR SINE MIR 190 261 -1 237 216 57 0 chr18 35882192 35882280 -50795268 - L1MA10 LINE L1 -2 6332 6240 225 0 0 0 chr18 35882282 35882307 -50795241 + (CA)n Simple_repeat Simple_repeat 2 26 0 1204 242 89 14 chr18 35882316 35882733 -50794815 - L1ME1 LINE L1 -94 6072 5625 185 317 87 19 chr18 35882897 35883001 -50794547 - MIR SINE MIR 0 262 152 464 249 71 91 chr18 35883242 35883292 -50794256 + L1ME LINE L1 5318 5367 -754 2392 105 0 0 chr18 35883292 35883605 -50793943 + AluSq SINE Alu 1 313 0 464 249 71 91 chr18 35883605 35883946 -50793602 + L1ME LINE L1 5367 5698 -423 1559 188 102 6 chr18 35884125 35884450 -50793098 - MSTB LTR MaLR -48 378 23 6937 62 1 4 chr18 35884450 35885937 -50791611 + L1PA7 LINE L1 4683 6153 -1 452 185 89 14 chr18 35885981 35886127 -50791421 - MSTB-int LTR MaLR 0 1651 1495 4602 67 3 3 chr18 35886228 35886828 -50790720 + L1PA7 LINE L1 5554 6153 -1 4929 175 40 6 chr18 35886871 35887865 -50789683 - MST-int LTR MaLR 0 1651 624 310 276 94 24 chr18 35887865 35887992 -50789556 + L1ME LINE L1 5578 5713 -408 263 242 0 0 chr18 35888052 35888118 -50789430 + L1ME LINE L1 5734 5799 -322 1948 152 0 7 chr18 35888134 35888431 -50789117 - AluSq SINE Alu -17 296 2 36 0 0 0 chr18 35888957 35888993 -50788555 + AT_rich Low_complexity Low_complexity 1 36 0 21 71 0 0 chr18 35889108 35889150 -50788398 + AT_rich Low_complexity Low_complexity 1 42 0 290 339 76 32 chr18 35889362 35889613 -50787935 - MLT1K LTR MaLR -233 355 94 332 336 55 7 chr18 35889729 35889875 -50787673 - MIR SINE MIR -69 193 41 213 274 284 10 chr18 35891081 35891183 -50786365 + MIR SINE MIR 6 135 -127 2780 10 0 0 chr18 35891765 35892067 -50785481 + AluYb8 SINE Alu 1 302 -16 421 257 147 0 chr18 35892240 35892376 -50785172 + L2 LINE L2 3117 3272 0 180 263 70 0 chr18 35892990 35893047 -50784501 + MIR3 SINE MIR 99 159 -49 392 213 11 0 chr18 35893306 35893400 -50784148 - MER53 DNA DNA -8 181 87 16677 62 5 1 chr18 35893405 35895569 -50781979 - HERVL-A1 LTR ERVL -3482 2172 1 2392 126 80 5 chr18 35895569 35895982 -50781566 - MLT2A1 LTR ERVL 0 444 1 1204 92 0 0 chr18 35896248 35896412 -50781136 - L1PA10 LINE L1 -4 6164 6001 218 297 142 68 chr18 35898381 35898748 -50778800 - L2 LINE L2 -47 3266 2873 260 287 43 17 chr18 35898832 35898947 -50778601 + L3 LINE CR1 911 1028 -549 1090 126 37 26 chr18 35899478 35899669 -50777879 - L1PA16 LINE L1 -6 6160 5968 182 314 74 83 chr18 35900288 35900409 -50777139 + MIR SINE MIR 39 158 -104 1328 190 11 37 chr18 35901125 35901393 -50776155 + AluJo SINE Alu 52 312 0 293 275 167 7 chr18 35902456 35902594 -50774954 + MIR SINE MIR 37 196 -66 294 324 67 0 chr18 35902666 35902771 -50774777 + MIR SINE MIR 3 114 -148 1911 174 161 5 chr18 35902775 35903190 -50774358 - MLT1D LTR MaLR 0 505 26 441 250 27 40 chr18 35903266 35903414 -50774134 + MIR SINE MIR 117 262 0 21 57 0 0 chr18 35904059 35904094 -50773454 + AT_rich Low_complexity Low_complexity 1 35 0 225 269 8 69 chr18 35905100 35905230 -50772318 + GA-rich Low_complexity Low_complexity 4 125 0 323 298 132 0 chr18 35905538 35905652 -50771896 + MIR SINE MIR 110 238 -24 261 155 0 0 chr18 35907649 35907707 -50769841 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 5591 158 29 3 chr18 35907915 35909611 -50767937 - L1PB2 LINE L1 -1 6150 4387 249 33 0 0 chr18 35909611 35909641 -50767907 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 5591 158 29 3 chr18 35909641 35910000 -50767548 - L1PB2 LINE L1 -1764 4387 4039 321 26 0 0 chr18 35910211 35910249 -50767299 + (TAA)n Simple_repeat Simple_repeat 2 39 0 282 384 82 30 chr18 35912069 35912509 -50765039 + L2 LINE L2 2810 3272 0 190 279 44 44 chr18 35913651 35913719 -50763829 - L2 LINE L2 0 3272 3205 252 0 0 0 chr18 35913904 35913932 -50763616 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2845 10 0 0 chr18 35913938 35914249 -50763299 - AluYa5 SINE Alu 0 311 1 227 292 149 18 chr18 35914903 35915071 -50762477 + L2 LINE L2 3083 3272 -41 205 330 38 28 chr18 35915077 35915183 -50762365 + L2 LINE L2 3154 3260 -12 749 137 29 0 chr18 35915196 35915335 -50762213 - L1MA7 LINE L1 -1 6290 6148 332 295 75 65 chr18 35915358 35915558 -50761990 - L2 LINE L2 -157 3115 2914 204 270 162 0 chr18 35916943 35917017 -50760531 + L2 LINE L2 3183 3268 -4 2092 170 80 21 chr18 35918930 35919395 -50758153 - MER67D LTR ERV1 0 514 23 2023 115 13 16 chr18 35920247 35920551 -50756997 - AluSx SINE Alu -9 303 1 265 220 102 42 chr18 35921427 35921545 -50756003 + L2 LINE L2 2266 2390 -924 219 125 0 0 chr18 35921648 35921688 -50755860 + (TC)n Simple_repeat Simple_repeat 1 40 0 396 0 0 0 chr18 35921695 35921739 -50755809 + (CA)n Simple_repeat Simple_repeat 1 44 0 203 147 0 0 chr18 35921986 35922020 -50755528 + (TTGG)n Simple_repeat Simple_repeat 1 34 0 184 186 34 0 chr18 35922061 35922120 -50755428 + GA-rich Low_complexity Low_complexity 2 62 0 777 333 37 10 chr18 35922762 35923056 -50754492 + L3 LINE CR1 376 677 -900 480 339 120 40 chr18 35923890 35924339 -50753209 + L3 LINE CR1 688 1172 -405 448 245 61 37 chr18 35924562 35924725 -50752823 + L3 LINE CR1 1243 1409 -168 278 328 78 9 chr18 35924795 35924911 -50752637 - MIR SINE MIR -74 188 65 234 340 0 68 chr18 35924948 35925051 -50752497 + L3 LINE CR1 1426 1521 -56 723 228 44 33 chr18 35925919 35926099 -50751449 - MIR SINE MIR 0 262 81 24 32 0 0 chr18 35926400 35926431 -50751117 + AT_rich Low_complexity Low_complexity 1 31 0 2299 39 21 0 chr18 35926970 35927251 -50750297 + L1PA5 LINE L1 5865 6151 -3 2435 120 92 2 chr18 35928030 35928423 -50749125 - MSTC LTR MaLR 0 428 1 234 141 31 16 chr18 35928880 35928944 -50748604 + A-rich Low_complexity Low_complexity 4 68 0 374 360 27 13 chr18 35929293 35929443 -50748105 - L2 LINE L2 -5 3267 3116 1813 152 22 34 chr18 35930098 35930296 -50747252 - MLT1A1 LTR MaLR -13 352 158 2271 98 10 0 chr18 35930296 35930591 -50746957 - AluSq SINE Alu -15 298 1 1813 152 22 34 chr18 35930591 35930748 -50746800 - MLT1A1 LTR MaLR -207 158 1 734 201 57 117 chr18 35931202 35931352 -50746196 + MER58D DNA MER1_type 21 142 -2278 1568 103 9 0 chr18 35931352 35931565 -50745983 - AluSq SINE Alu -11 302 88 734 201 57 117 chr18 35931565 35931748 -50745800 + MER58D DNA MER1_type 142 334 -52 2286 82 0 3 chr18 35931790 35932081 -50745467 + AluY SINE Alu 3 292 -19 21 36 0 0 chr18 35932759 35932787 -50744761 + AT_rich Low_complexity Low_complexity 1 28 0 1900 233 32 37 chr18 35933264 35933857 -50743691 - MLT1E3 LTR MaLR -2 622 33 237 300 33 33 chr18 35935093 35935183 -50742365 - L2 LINE L2 0 3313 3224 338 308 99 12 chr18 35935411 35935583 -50741965 + L2 LINE L2 2429 2615 -699 1459 226 140 87 chr18 35935585 35935775 -50741773 + MLT1E2 LTR MaLR 16 195 -431 2259 95 13 0 chr18 35935775 35936079 -50741469 + AluY SINE Alu 1 308 -3 1459 226 140 87 chr18 35936079 35936495 -50741053 + MLT1E2 LTR MaLR 195 626 0 2134 97 10 37 chr18 35936912 35937211 -50740337 - AluY SINE Alu -20 291 1 1266 276 39 19 chr18 35937261 35937858 -50739690 + L2 LINE L2 2703 3313 0 1836 133 36 77 chr18 35938068 35938459 -50739089 - THE1C LTR MaLR 0 375 1 684 156 99 0 chr18 35939015 35939156 -50738392 - L1MB4 LINE L1 -10 6170 6016 1568 71 0 25 chr18 35939378 35939602 -50737946 - AluY SINE Alu 0 309 91 381 265 128 0 chr18 35939621 35939738 -50737810 - L2 LINE L2 -6 3307 3176 182 186 42 195 chr18 35939780 35939898 -50737650 + L2 LINE L2 3171 3270 -2 24 32 0 0 chr18 35940674 35940705 -50736843 + AT_rich Low_complexity Low_complexity 1 31 0 1194 124 39 17 chr18 35941825 35942058 -50735490 - L1MA7 LINE L1 -6 6285 6048 207 100 0 0 chr18 35942262 35942292 -50735256 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 275 281 91 58 chr18 35942728 35942849 -50734699 - L2 LINE L2 -1 3271 3147 23 0 0 0 chr18 35944425 35944448 -50733100 + AT_rich Low_complexity Low_complexity 1 23 0 318 325 9 9 chr18 35944583 35944697 -50732851 + MER5B DNA MER1_type 1 114 -64 181 344 31 37 chr18 35944968 35945131 -50732417 + L2 LINE L2 2903 3064 -208 2165 68 75 0 chr18 35945503 35945782 -50731766 - AluY SINE Alu -11 300 1 243 179 89 0 chr18 35946108 35946164 -50731384 - MIR SINE MIR -79 183 123 232 138 46 46 chr18 35946217 35946282 -50731266 + L1MA9 LINE L1 6225 6289 -23 280 325 92 0 chr18 35946364 35946484 -50731064 + L2 LINE L2 3182 3312 -1 246 275 211 18 chr18 35947524 35947633 -50729915 - MER5A DNA MER1_type -1 188 59 239 258 65 0 chr18 35947682 35947744 -50729804 + MER5B DNA MER1_type 112 177 -1 211 267 100 44 chr18 35947843 35947933 -50729615 - MER5A DNA MER1_type -26 163 69 655 251 77 57 chr18 35948904 35949151 -50728397 - MIR SINE MIR -3 259 8 25 31 0 0 chr18 35949612 35949644 -50727904 + AT_rich Low_complexity Low_complexity 1 32 0 197 305 74 21 chr18 35949644 35949739 -50727809 - MIR SINE MIR -161 101 2 310 325 77 24 chr18 35949786 35949995 -50727553 + L2 LINE L2 2574 2793 -521 336 313 52 9 chr18 35950112 35950227 -50727321 + L2 LINE L2 3117 3236 -36 313 319 14 57 chr18 35950696 35950837 -50726711 - L2 LINE L2 -2 3270 3136 959 43 0 0 chr18 35951138 35951253 -50726295 - AluY SINE Alu -8 303 189 220 279 120 64 chr18 35951266 35951499 -50726049 - L2 LINE L2 -575 2739 2494 27 29 0 0 chr18 35952073 35952107 -50725441 + AT_rich Low_complexity Low_complexity 1 34 0 291 286 143 8 chr18 35952438 35952571 -50724977 - MIR3 SINE MIR -55 153 3 2275 187 40 83 chr18 35953234 35953838 -50723710 + L1ME1 LINE L1 5497 6074 -92 267 359 50 31 chr18 35954226 35954385 -50723163 + MIR SINE MIR 30 191 -71 513 289 21 0 chr18 35955393 35955535 -50722013 - MIR3 SINE MIR -6 202 58 21 0 0 0 chr18 35957248 35957269 -50720279 + AT_rich Low_complexity Low_complexity 1 21 0 1856 164 0 3 chr18 35958579 35958871 -50718677 - AluJb SINE Alu -21 291 1 255 239 125 11 chr18 35959364 35959452 -50718096 - MIR SINE MIR -85 177 80 182 268 84 14 chr18 35959650 35959721 -50717827 + L3 LINE CR1 1256 1331 -246 262 265 36 12 chr18 35960764 35960847 -50716701 - L2 LINE L2 0 3272 3188 188 284 284 0 chr18 35960936 35961017 -50716531 + L2 LINE L2 3210 3313 0 34 43 0 29 chr18 35962056 35962084 -50715464 + AT_rich Low_complexity Low_complexity 1 28 -40 2183 102 3 3 chr18 35962084 35962379 -50715169 - AluSc SINE Alu -14 295 1 34 43 0 29 chr18 35962379 35962420 -50715128 + AT_rich Low_complexity Low_complexity 28 68 0 239 358 25 17 chr18 35964453 35964573 -50712975 - L2 LINE L2 -2 3270 3150 379 302 103 110 chr18 35964960 35965397 -50712151 - L2 LINE L2 -661 2653 2220 2195 125 0 0 chr18 35965898 35966195 -50711353 - AluSx SINE Alu -15 297 1 279 284 80 0 chr18 35966340 35966428 -50711120 - MIR SINE MIR 0 262 168 1813 131 75 31 chr18 35966430 35966789 -50710759 - THE1C LTR MaLR 0 375 1 1494 144 129 8 chr18 35967239 35967503 -50710045 + AluJb SINE Alu 3 298 -14 2178 82 38 7 chr18 35967617 35967908 -50709640 + AluSg SINE Alu 1 300 -10 203 0 37 0 chr18 35968309 35968336 -50709212 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 213 39 0 0 chr18 35969054 35969080 -50708468 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 365 246 32 91 chr18 35969151 35969338 -50708210 + MER5A DNA MER1_type 7 182 -7 409 291 16 16 chr18 35969390 35969517 -50708031 + MIR3 SINE MIR 12 138 -70 198 0 0 0 chr18 35970121 35970143 -50707405 + (T)n Simple_repeat Simple_repeat 1 22 0 301 326 72 9 chr18 35970655 35970876 -50706672 - MLT1L LTR MaLR -376 239 5 978 131 55 0 chr18 35971584 35971762 -50705786 + AluSg/x SINE Alu 135 320 0 261 250 89 18 chr18 35972133 35972245 -50705303 + MER91C DNA MER1_type 2 121 -19 2986 106 14 31 chr18 35972615 35973097 -50704451 + L1MA5 LINE L1 5800 6273 -27 447 202 0 0 chr18 35974883 35974977 -50702571 + FLAM_C SINE Alu 41 134 -9 29 0 0 0 chr18 35974977 35975006 -50702542 + AT_rich Low_complexity Low_complexity 1 29 0 630 37 0 12 chr18 35979817 35979898 -50697650 + MADE1 DNA Mariner 1 80 0 295 361 48 13 chr18 35980086 35980313 -50697235 + L2 LINE L2 2599 2833 -481 189 107 0 0 chr18 35982496 35982524 -50695024 + (TG)n Simple_repeat Simple_repeat 2 29 0 2376 61 0 3 chr18 35984060 35984357 -50693191 + AluY SINE Alu 1 296 -15 618 39 0 0 chr18 35984369 35984447 -50693101 + L1PA8 LINE L1 6090 6167 -5 418 152 0 0 chr18 35984614 35984680 -50692868 - FLAM SINE Alu -10 133 68 180 0 0 0 chr18 35984799 35984819 -50692729 + (A)n Simple_repeat Simple_repeat 1 20 0 209 161 0 0 chr18 35984857 35984888 -50692660 + (CA)n Simple_repeat Simple_repeat 2 32 0 895 110 7 14 chr18 35986099 35986244 -50691304 - L1PB1 LINE L1 -2 6149 6006 210 244 0 0 chr18 35990537 35990578 -50686970 + (TG)n Simple_repeat Simple_repeat 2 42 0 2183 121 0 0 chr18 35991351 35991648 -50685900 + AluSq SINE Alu 1 297 -16 288 0 0 0 chr18 35993270 35993302 -50684246 + (TG)n Simple_repeat Simple_repeat 1 32 0 2535 148 19 21 chr18 35994009 35994079 -50683469 - MSTB1 LTR MaLR 0 432 363 2291 93 0 23 chr18 35994079 35994381 -50683167 + AluSq SINE Alu 1 295 -18 2535 148 19 21 chr18 35994381 35994743 -50682805 - MSTB1 LTR MaLR -69 363 1 190 113 19 38 chr18 35995373 35995426 -50682122 + GA-rich Low_complexity Low_complexity 3 54 0 2320 88 17 0 chr18 35996236 35996532 -50681016 + AluSx SINE Alu 1 301 -11 180 0 0 0 chr18 35996699 35996719 -50680829 + (A)n Simple_repeat Simple_repeat 1 20 0 24 85 0 0 chr18 35997406 35997465 -50680083 + AT_rich Low_complexity Low_complexity 1 59 0 375 123 62 0 chr18 35999876 35999941 -50677607 - MADE1 DNA Mariner -10 70 2 183 80 0 0 chr18 36001036 36001061 -50676487 + (TAA)n Simple_repeat Simple_repeat 3 27 0 403 332 91 27 chr18 36001071 36001291 -50676257 - MIR SINE MIR -21 241 8 372 275 61 8 chr18 36001636 36001767 -50675781 - MIR SINE MIR -56 206 69 583 341 22 75 chr18 36002486 36003092 -50674456 + L2 LINE L2 2731 3303 -10 1726 159 78 32 chr18 36003444 36003816 -50673732 - MLT1B LTR MaLR 0 390 2 26 0 0 0 chr18 36005507 36005533 -50672015 + AT_rich Low_complexity Low_complexity 1 26 0 396 335 43 12 chr18 36006159 36006320 -50671228 + MER5A DNA MER1_type 24 189 0 229 229 12 72 chr18 36006419 36006502 -50671046 - MIR SINE MIR -1 261 184 1431 219 138 37 chr18 36007446 36007934 -50669614 - MLT1F1 LTR MaLR 0 567 31 190 191 270 0 chr18 36009484 36009547 -50668001 + MIR SINE MIR 59 138 -70 718 312 58 15 chr18 36009638 36009965 -50667583 + MER102b DNA MER1_type 1 341 0 232 344 0 0 chr18 36010738 36010828 -50666720 + L1MC/D LINE L1 5839 5928 -1880 2192 121 7 0 chr18 36011147 36011452 -50666096 - AluSx SINE Alu -5 307 1 874 262 127 47 chr18 36012529 36013126 -50664422 + L2 LINE L2 2662 3307 -6 488 56 0 122 chr18 36013196 36013286 -50664262 + MADE1 DNA Mariner 2 80 0 33 0 0 0 chr18 36013701 36013734 -50663814 + AT_rich Low_complexity Low_complexity 1 33 0 322 200 0 71 chr18 36014927 36015012 -50662536 - MIR SINE MIR -58 204 126 576 321 32 14 chr18 36016640 36016861 -50660687 + MIR SINE MIR 28 252 -10 180 313 0 0 chr18 36016971 36017019 -50660529 - MIR3 SINE MIR 0 208 161 2174 127 3 0 chr18 36018662 36018961 -50658587 - AluSq SINE Alu -13 300 1 213 244 0 0 chr18 36019215 36019260 -50658288 - L3 LINE CR1 -6 1571 1527 2105 131 75 1 chr18 36019283 36019797 -50657751 - MER51A LTR ERV1 -11 623 1 1290 89 0 11 chr18 36020076 36020278 -50657270 - AluSg1 SINE Alu 0 309 119 180 0 0 0 chr18 36020278 36020298 -50657250 + (T)n Simple_repeat Simple_repeat 1 20 0 1033 84 0 0 chr18 36020466 36020597 -50656951 - AluSg1 SINE Alu -178 131 1 325 315 7 56 chr18 36021021 36021164 -50656384 - MIR SINE MIR -22 240 105 298 256 68 8 chr18 36021281 36021414 -50656134 - L1MC4 LINE L1 -206 7836 7696 2437 62 0 3 chr18 36021434 36021738 -50655810 + AluY SINE Alu 1 303 -8 402 39 0 0 chr18 36022064 36022116 -50655432 + MADE1 DNA Mariner 29 80 0 201 147 0 0 chr18 36022344 36022378 -50655170 + (A)n Simple_repeat Simple_repeat 1 34 0 57 66 0 0 chr18 36022610 36022716 -50654832 + AT_rich Low_complexity Low_complexity 1 106 0 1463 183 7 11 chr18 36022772 36023045 -50654503 + AluJo SINE Alu 37 308 -4 213 303 0 15 chr18 36023864 36023930 -50653618 + L2 LINE L2 3206 3270 -2 2558 29 0 13 chr18 36024465 36024772 -50652776 - AluY SINE Alu -8 303 1 243 167 39 29 chr18 36025463 36025565 -50651983 + CT-rich Low_complexity Low_complexity 3 105 0 261 0 0 0 chr18 36027211 36027240 -50650308 + (TTAAA)n Simple_repeat Simple_repeat 3 31 0 225 65 0 0 chr18 36029517 36029548 -50648000 + (CA)n Simple_repeat Simple_repeat 2 32 0 2476 34 0 17 chr18 36029956 36030250 -50647298 + AluY SINE Alu 1 289 -22 21 57 0 0 chr18 36030749 36030784 -50646764 + AT_rich Low_complexity Low_complexity 1 35 0 393 247 10 0 chr18 36032640 36032737 -50644811 - MER46C DNA MER2_type -2 336 239 282 130 0 37 chr18 36032785 36032839 -50644709 - MER46C DNA MER2_type -286 52 1 549 270 79 6 chr18 36033103 36033295 -50644253 + MIR SINE MIR 16 212 -50 258 352 56 24 chr18 36033752 36033965 -50643583 + MIR SINE MIR 40 259 -3 298 291 97 20 chr18 36036638 36036885 -50640663 + L1MC/D LINE L1 5267 5532 -2276 27 29 0 0 chr18 36037152 36037186 -50640362 + AT_rich Low_complexity Low_complexity 1 34 0 349 219 67 25 chr18 36037588 36037707 -50639841 - MER94 DNA DNA -1 133 10 1695 151 46 23 chr18 36038176 36038481 -50639067 - AluJo SINE Alu 0 312 1 331 216 22 60 chr18 36038509 36038643 -50638905 - L1ME4a LINE L1 -6 6115 5987 593 154 0 10 chr18 36038692 36038796 -50638752 - FLAM_C SINE Alu -14 129 27 216 0 0 0 chr18 36041654 36041678 -50635870 + (T)n Simple_repeat Simple_repeat 1 24 0 214 208 57 0 chr18 36041769 36041822 -50635726 + (TATG)n Simple_repeat Simple_repeat 2 57 0 2162 124 0 3 chr18 36042590 36042880 -50634668 - AluSg SINE Alu -17 293 5 2086 143 7 0 chr18 36043516 36043824 -50633724 - AluJo SINE Alu 0 312 3 22 70 0 0 chr18 36044502 36044545 -50633003 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr18 36045555 36045583 -50631965 + AT_rich Low_complexity Low_complexity 1 28 0 287 358 68 0 chr18 36045689 36045837 -50631711 + MIR SINE MIR 12 169 -93 219 69 0 0 chr18 36047845 36047874 -50629674 + (TG)n Simple_repeat Simple_repeat 1 29 0 1026 193 11 0 chr18 36049451 36049638 -50627910 + MER5A DNA MER1_type 1 189 0 225 0 0 0 chr18 36051483 36051508 -50626040 + (TG)n Simple_repeat Simple_repeat 2 26 0 187 293 10 50 chr18 36051946 36052045 -50625503 + L2 LINE L2 3219 3313 0 1164 108 10 26 chr18 36052180 36052375 -50625173 + L1MA10 LINE L1 6140 6331 -3 240 247 0 82 chr18 36052927 36053000 -50624548 - MER5A DNA MER1_type -83 106 40 191 197 28 113 chr18 36052946 36053017 -50624531 + MER5A DNA MER1_type 114 178 -11 * 256 192 39 0 chr18 36053043 36053095 -50624453 + MER5A DNA MER1_type 4 57 -132 847 220 23 12 chr18 36053136 36053309 -50624239 - MER21B LTR ERV1 -667 196 22 2609 157 28 4 chr18 36053338 36053810 -50623738 - L1M4c LINE L1 -4537 1847 1365 1149 279 121 22 chr18 36053838 36054250 -50623298 - L2 LINE L2 -671 2643 2191 1239 80 0 0 chr18 36054502 36054677 -50622871 + L1P LINE L1 1245 1419 -4727 44351 37 1 1 chr18 36054991 36061145 -50616403 + L1PA3 LINE L1 3 6155 0 210 280 70 50 chr18 36061271 36061371 -50616177 + MIR SINE MIR 150 251 -11 228 275 14 0 chr18 36061794 36061863 -50615685 + L1ME4a LINE L1 5739 5808 -313 2862 176 41 40 chr18 36061903 36062182 -50615366 + L1MB8 LINE L1 5538 5815 -363 2107 122 7 7 chr18 36062182 36062477 -50615071 + AluSx SINE Alu 1 295 -17 2862 176 41 40 chr18 36062477 36062828 -50614720 + L1MB8 LINE L1 5815 6169 -9 2177 237 145 17 chr18 36063006 36063731 -50613817 + HAL1 LINE L1 118 935 -1572 320 270 40 14 chr18 36063817 36063891 -50613657 - MLT1J2 LTR MaLR -98 352 277 830 231 99 62 chr18 36063986 36064045 -50613503 + HAL1 LINE L1 2016 2071 -436 2100 106 7 3 chr18 36064045 36064406 -50613142 + AluSq SINE Alu 1 362 0 830 231 99 62 chr18 36064406 36064717 -50612831 + HAL1 LINE L1 2071 2401 -106 324 257 79 40 chr18 36064767 36064919 -50612629 + L1ME4a LINE L1 5957 6114 -7 2363 120 21 24 chr18 36065237 36065613 -50611935 - THE1C LTR MaLR 0 375 1 9584 107 58 38 chr18 36065613 36067162 -50610386 - THE1C-int LTR MaLR 0 1580 1 2573 106 13 16 chr18 36067162 36067538 -50610010 - THE1C LTR MaLR 0 375 1 222 220 0 20 chr18 36067673 36067723 -50609825 + CT-rich Low_complexity Low_complexity 2 50 0 254 274 170 7 chr18 36067815 36067950 -50609598 - MIR SINE MIR -72 190 34 1158 150 0 0 chr18 36068711 36068884 -50608664 - FRAM SINE Alu -5 171 1 216 0 0 0 chr18 36068885 36068909 -50608639 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 1776 166 14 0 chr18 36068909 36069187 -50608361 - AluJb SINE Alu -30 282 1 1126 218 125 22 chr18 36069479 36069791 -50607757 + MER2 DNA MER2_type 1 344 0 360 233 33 0 chr18 36070420 36070510 -50607038 - MER81 DNA DNA -21 93 1 2027 131 0 13 chr18 36072643 36072948 -50604600 - AluSx SINE Alu 0 312 12 450 0 0 0 chr18 36074286 36074336 -50603212 + (TA)n Simple_repeat Simple_repeat 2 51 0 78 12 0 0 chr18 36075553 36075638 -50601910 + AT_rich Low_complexity Low_complexity 1 85 0 260 126 52 40 chr18 36075644 36075818 -50601730 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 241 88 126 0 chr18 36075787 36075946 -50601602 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 24 0 0 0 chr18 36075960 36075984 -50601564 + AT_rich Low_complexity Low_complexity 1 24 0 229 98 115 0 chr18 36075984 36076045 -50601503 + (TTTAA)n Simple_repeat Simple_repeat 5 72 0 432 296 45 8 chr18 36076314 36076446 -50601102 - MIR SINE MIR -79 183 47 4950 91 0 1 chr18 36076625 36077314 -50600234 + L1PA12 LINE L1 5481 6168 0 346 190 30 0 chr18 36077415 36077515 -50600033 + (TTTA)n Simple_repeat Simple_repeat 4 106 0 26 50 0 0 chr18 36078566 36078606 -50598942 + AT_rich Low_complexity Low_complexity 1 40 0 284 62 0 21 chr18 36078621 36078669 -50598879 + (TTTTA)n Simple_repeat Simple_repeat 4 50 0 2340 84 0 0 chr18 36079944 36080242 -50597306 - AluSq SINE Alu -15 298 1 2393 81 0 0 chr18 36080248 36080567 -50596981 - AluSc SINE Alu 0 309 5 180 0 0 0 chr18 36081368 36081388 -50596160 + (A)n Simple_repeat Simple_repeat 1 20 0 247 395 0 0 chr18 36082070 36082151 -50595397 + MIR SINE MIR 37 117 -91 739 301 117 48 chr18 36082158 36082570 -50594978 - MLT1J2 LTR MaLR -6 444 1 21 0 0 0 chr18 36082793 36082814 -50594734 + AT_rich Low_complexity Low_complexity 1 21 0 1843 160 3 14 chr18 36082816 36083109 -50594439 + AluJb SINE Alu 3 292 -20 23 33 0 0 chr18 36083643 36083673 -50593875 + AT_rich Low_complexity Low_complexity 1 30 0 227 337 17 12 chr18 36084002 36084174 -50593374 + A-rich Low_complexity Low_complexity 6 178 0 1089 240 67 15 chr18 36084174 36084503 -50593045 + L1M4c LINE L1 1380 1725 -4659 419 312 19 48 chr18 36084484 36084560 -50592988 + HAL1b LINE L1 385 462 -886 * 2430 171 0 5 chr18 36084560 36084958 -50592590 - MSTD LTR MaLR 0 396 1 419 312 19 48 chr18 36084958 36085150 -50592398 + HAL1b LINE L1 462 645 -703 4181 270 58 63 chr18 36085219 36086030 -50591518 + L1MC4a LINE L1 5531 6345 -1463 2187 103 3 29 chr18 36086030 36086340 -50591208 - AluSx SINE Alu -10 302 1 4181 270 58 63 chr18 36086340 36086368 -50591180 + L1MC4a LINE L1 6345 6372 -1436 2194 106 7 3 chr18 36086368 36086660 -50590888 + AluSc SINE Alu 1 293 -16 4181 270 58 63 chr18 36086660 36088010 -50589538 + L1MC4a LINE L1 6372 7709 -99 303 255 38 38 chr18 36088013 36088119 -50589429 + L1MC4 LINE L1 7807 7912 -130 260 178 14 0 chr18 36088147 36088220 -50589328 + GA-rich Low_complexity Low_complexity 2 75 0 410 252 0 49 chr18 36088226 36088349 -50589199 + L1MC4 LINE L1 7922 8038 -4 297 326 16 23 chr18 36088709 36088838 -50588710 + MLT1K LTR MaLR 342 469 -119 504 282 80 77 chr18 36088851 36089241 -50588307 + L2 LINE L2 2923 3313 0 192 325 12 72 chr18 36089370 36089453 -50588095 + L2 LINE L2 3174 3251 -21 205 138 0 0 chr18 36089682 36089711 -50587837 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 205 138 0 0 chr18 36089971 36090000 -50587548 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 210 259 18 4 chr18 36090285 36090355 -50587193 + MIR SINE MIR 92 145 -63 3046 140 13 10 chr18 36091067 36091589 -50585959 + L1MA9 LINE L1 5789 6312 0 723 222 48 55 chr18 36091615 36091857 -50585691 + MIR SINE MIR 18 262 0 22 0 0 0 chr18 36091875 36091897 -50585651 + AT_rich Low_complexity Low_complexity 1 22 0 184 267 217 8 chr18 36092654 36092774 -50584774 - L2 LINE L2 -1 3312 3168 203 289 0 26 chr18 36092945 36093021 -50584527 + MIR SINE MIR 183 256 -6 463 295 86 86 chr18 36093458 36093794 -50583754 - MLT1I LTR MaLR -3 406 71 196 319 42 0 chr18 36093964 36094036 -50583512 + L2 LINE L2 3221 3295 -18 24 53 0 0 chr18 36094392 36094430 -50583118 + AT_rich Low_complexity Low_complexity 1 38 0 2281 73 0 23 chr18 36095250 36095553 -50581995 - AluY SINE Alu -14 297 2 22 0 0 0 chr18 36095935 36095957 -50581591 + AT_rich Low_complexity Low_complexity 1 22 0 3191 193 52 7 chr18 36098346 36098964 -50578584 + MER82 DNA MER2_type 2 647 -6 1214 240 58 21 chr18 36099925 36100441 -50577107 + L1ME1 LINE L1 3068 3602 -2544 3495 232 49 26 chr18 36100454 36100932 -50576616 + L1ME1 LINE L1 4549 5014 -1152 1888 111 11 0 chr18 36100932 36101202 -50576346 - AluSp SINE Alu -2 311 39 3495 232 49 26 chr18 36101202 36102305 -50575243 + L1ME1 LINE L1 5014 6161 -5 271 54 0 27 chr18 36102378 36102435 -50575113 + L1PA6 LINE L1 6097 6148 -6 25 0 0 0 chr18 36102562 36102587 -50574961 + AT_rich Low_complexity Low_complexity 1 25 0 691 335 77 21 chr18 36102748 36103271 -50574277 + L2 LINE L2 1618 2169 -1145 336 343 147 14 chr18 36103514 36103806 -50573742 + L2 LINE L2 2554 2884 -430 312 277 10 10 chr18 36103999 36104100 -50573448 - MIR3 SINE MIR -25 183 83 218 247 13 0 chr18 36105254 36105331 -50572217 + GA-rich Low_complexity Low_complexity 3 80 0 287 100 0 83 chr18 36105337 36105397 -50572151 + L1ME4a LINE L1 6066 6120 -1 21 0 0 0 chr18 36105397 36105418 -50572130 + AT_rich Low_complexity Low_complexity 1 21 0 180 265 0 0 chr18 36105745 36105779 -50571769 - L2 LINE L2 -1406 1908 1875 250 186 34 0 chr18 36105792 36105851 -50571697 + L1MC/D LINE L1 4886 4946 -1200 865 229 106 20 chr18 36105877 36106313 -50571235 + L1MC/D LINE L1 5055 5518 -765 1544 112 95 95 chr18 36106366 36106660 -50570888 + AluSx SINE Alu 1 294 -18 23 33 0 0 chr18 36106663 36106693 -50570855 + AT_rich Low_complexity Low_complexity 1 30 0 553 247 122 28 chr18 36106853 36107061 -50570487 + MIR SINE MIR 2 211 -51 1743 184 10 0 chr18 36107352 36107651 -50569897 + AluJo SINE Alu 1 302 -10 25 0 0 0 chr18 36107698 36107723 -50569825 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr18 36108927 36108948 -50568600 + AT_rich Low_complexity Low_complexity 1 21 0 618 250 147 0 chr18 36109226 36109382 -50568166 - MER5A DNA MER1_type 0 189 11 4391 179 67 37 chr18 36110213 36110303 -50567245 - Charlie1a DNA MER1_type -1382 1379 1293 2198 107 17 3 chr18 36110303 36110601 -50566947 + AluSq SINE Alu 1 302 -11 4391 179 67 37 chr18 36110601 36110816 -50566732 - Charlie1a DNA MER1_type -1468 1293 1086 2530 51 3 0 chr18 36110816 36111109 -50566439 - AluY SINE Alu -15 296 3 4391 179 67 37 chr18 36111109 36111897 -50565651 - Charlie1a DNA MER1_type -1675 1086 253 687 174 0 0 chr18 36111912 36112021 -50565527 - Charlie1a DNA MER1_type -1308 147 39 701 233 96 42 chr18 36112271 36112511 -50565037 + MIR SINE MIR 10 262 0 1823 154 7 0 chr18 36112521 36112843 -50564705 - AluJb SINE Alu 0 324 1 216 266 31 16 chr18 36113182 36113246 -50564302 + L2 LINE L2 3201 3265 -7 5619 186 4 5 chr18 36115041 36116121 -50561427 - L1P LINE L1 -1440 4706 3628 2851 128 6 13 chr18 36116121 36116588 -50560960 + L1PA15 LINE L1 5697 6163 -2 1288 239 46 15 chr18 36117769 36118096 -50559452 + LTR16C LTR ERVL 152 488 -3 1138 243 147 16 chr18 36118424 36118791 -50558757 + LTR16C LTR ERVL 73 487 -4 26 30 0 0 chr18 36119540 36119573 -50557975 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr18 36120219 36120241 -50557307 + AT_rich Low_complexity Low_complexity 1 22 0 210 309 49 0 chr18 36120839 36120920 -50556628 + L2 LINE L2 1337 1421 -1893 199 414 8 31 chr18 36120941 36121069 -50556479 - L2 LINE L2 -7 3265 3141 216 0 0 0 chr18 36121587 36121611 -50555937 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 941 239 89 12 chr18 36121659 36121906 -50555642 - MLT1H1 LTR MaLR 0 555 290 551 301 77 0 chr18 36121954 36122163 -50555385 - L2 LINE L2 -11 3302 3078 510 211 40 74 chr18 36123483 36123529 -50554019 - MER104 DNA Tc2 -1723 175 129 1819 180 49 0 chr18 36123529 36123917 -50553631 - L1MA4 LINE L1 -9 6291 5885 510 211 40 74 chr18 36123917 36124045 -50553503 - MER104 DNA Tc2 -1769 129 7 254 299 155 16 chr18 36124123 36124310 -50553238 - MLT1K LTR MaLR -20 568 356 2317 100 3 0 chr18 36124391 36124692 -50552856 - AluSq SINE Alu -11 302 1 380 97 2 5 chr18 36124872 36124939 -50552609 + MLT2C2 LTR ERVL 1 66 -348 222 37 0 0 chr18 36124947 36124974 -50552574 + (CA)n Simple_repeat Simple_repeat 2 28 0 1859 102 14 29 chr18 36125042 36125317 -50552231 + AluSx SINE Alu 36 306 -6 471 265 15 29 chr18 36127017 36127153 -50550395 - L2 LINE L2 0 3313 3180 22 0 0 0 chr18 36127250 36127272 -50550276 + AT_rich Low_complexity Low_complexity 1 22 0 3347 213 71 14 chr18 36127418 36128160 -50549388 - MER21B LTR ERV1 -60 803 19 424 172 17 95 chr18 36128157 36128273 -50549275 - MER21B LTR ERV1 -756 107 1 * 2065 148 0 0 chr18 36128445 36128743 -50548805 + AluSx SINE Alu 1 298 -14 402 306 100 77 chr18 36129158 36129364 -50548184 + L2 LINE L2 2230 2430 -884 225 0 0 0 chr18 36129364 36129389 -50548159 + (TC)n Simple_repeat Simple_repeat 1 25 0 402 306 100 77 chr18 36129389 36129701 -50547847 + L2 LINE L2 2430 2760 -554 342 182 123 45 chr18 36129708 36129862 -50547686 - Charlie7 DNA MER1_type -28 2584 2419 1094 165 0 11 chr18 36129869 36130051 -50547497 - FRAM SINE Alu -1 175 1 917 213 107 20 chr18 36130053 36130353 -50547195 - Charlie7 DNA MER1_type -202 2410 2085 1219 228 89 24 chr18 36130383 36130765 -50546783 - Charlie7 DNA MER1_type -2205 407 1 22 35 0 0 chr18 36131606 36131635 -50545913 + AT_rich Low_complexity Low_complexity 1 29 0 33 0 0 0 chr18 36132309 36132342 -50545206 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr18 36132464 36132487 -50545061 + AT_rich Low_complexity Low_complexity 1 23 0 928 246 125 20 chr18 36133459 36133756 -50543792 + MLT1I LTR MaLR 82 409 0 4224 168 27 12 chr18 36134070 36135378 -50542170 + L1MA4A LINE L1 4789 6112 -191 394 216 31 0 chr18 36135390 36135487 -50542061 + L1MA4A LINE L1 6181 6280 -23 22 0 0 0 chr18 36135505 36135527 -50542021 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr18 36135820 36135848 -50541700 + AT_rich Low_complexity Low_complexity 1 28 0 808 259 50 18 chr18 36136244 36136464 -50541084 - MIR SINE MIR -5 257 31 447 233 247 7 chr18 36136484 36136630 -50540918 + MER5A DNA MER1_type 9 189 0 186 43 0 0 chr18 36137473 36137496 -50540052 + (CGG)n Simple_repeat Simple_repeat 3 25 0 708 238 17 39 chr18 36139339 36139520 -50538028 + MER5B DNA MER1_type 1 177 -1 2242 85 41 0 chr18 36140550 36140845 -50536703 - AluSx SINE Alu 0 312 6 199 176 0 0 chr18 36140869 36140903 -50536645 + MIR SINE MIR 213 246 -16 1686 131 0 26 chr18 36141651 36141918 -50535630 + AluSx SINE Alu 36 295 -17 2458 71 3 0 chr18 36142398 36142708 -50534840 - AluY SINE Alu 0 311 1 1031 198 85 8 chr18 36143337 36143584 -50533964 + MER58B DNA MER1_type 39 304 -37 189 0 0 0 chr18 36143671 36143692 -50533856 + (TTTTTG)n Simple_repeat Simple_repeat 4 24 0 2035 156 0 0 chr18 36144160 36144455 -50533093 - AluSx SINE Alu -17 295 1 342 109 95 15 chr18 36145262 36145399 -50532149 + (TA)n Simple_repeat Simple_repeat 2 149 0 280 144 16 53 chr18 36145400 36145587 -50531961 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 * 386 85 91 6 chr18 36145556 36145721 -50531827 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 595 78 28 50 chr18 36145716 36145895 -50531653 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 466 41 88 35 chr18 36145908 36146078 -50531470 + (TA)n Simple_repeat Simple_repeat 2 180 0 233 109 31 47 chr18 36146079 36146143 -50531405 + (TATAA)n Simple_repeat Simple_repeat 5 67 0 368 64 102 19 chr18 36146143 36146300 -50531248 + (TA)n Simple_repeat Simple_repeat 2 171 0 311 120 20 0 chr18 36147297 36147347 -50530201 - MER53 DNA DNA 0 189 139 376 286 170 0 chr18 36147827 36147974 -50529574 + MER5A DNA MER1_type 18 189 0 2105 125 0 0 chr18 36148180 36148468 -50529080 - AluJb SINE Alu -24 288 1 263 265 43 111 chr18 36148891 36149008 -50528540 + MIR SINE MIR 38 146 -116 1408 196 11 29 chr18 36149959 36150240 -50527308 + AluJo SINE Alu 7 282 -30 462 268 0 43 chr18 36150252 36150390 -50527158 + MER5A DNA MER1_type 7 138 -51 212 277 0 0 chr18 36150542 36150589 -50526959 + L2 LINE L2 3229 3275 -38 755 195 0 0 chr18 36151264 36151392 -50526156 + FLAM_C SINE Alu 1 128 -5 1526 123 3 118 chr18 36151537 36151869 -50525679 - L1PA16 LINE L1 -1 6165 5872 181 352 114 0 chr18 36152572 36152660 -50524888 + MIR SINE MIR 45 142 -66 246 281 156 0 chr18 36152936 36153071 -50524477 + MIR3 SINE MIR 30 185 -23 1235 211 54 39 chr18 36153649 36153928 -50523620 - AluJo SINE Alu -29 283 1 308 253 51 0 chr18 36154429 36154508 -50523040 - MIR3 SINE MIR -8 200 118 213 39 0 0 chr18 36154513 36154539 -50523009 + (T)n Simple_repeat Simple_repeat 1 26 0 271 234 130 53 chr18 36155316 36155447 -50522101 - MIR SINE MIR -66 142 4 402 214 238 32 chr18 36156403 36156529 -50521019 + MER5A DNA MER1_type 9 160 -29 1645 104 0 40 chr18 36156730 36156980 -50520568 - MER1B DNA MER1_type 0 339 100 270 283 98 22 chr18 36156982 36157074 -50520474 + L2 LINE L2 3145 3243 -29 334 256 24 0 chr18 36157129 36157211 -50520337 + MIR SINE MIR 117 200 -62 436 327 40 13 chr18 36157390 36157541 -50520007 + MIR SINE MIR 3 153 -55 361 214 34 0 chr18 36157734 36157823 -50519725 + MER106B DNA MER1_type 51 142 -917 2270 99 0 0 chr18 36158059 36158353 -50519195 + AluSq SINE Alu 1 294 -19 2556 64 0 3 chr18 36158840 36159152 -50518396 - AluY SINE Alu 0 311 1 993 125 0 0 chr18 36159152 36159288 -50518260 - AluSq/x SINE Alu -176 136 1 252 0 0 0 chr18 36159298 36159326 -50518222 + (T)n Simple_repeat Simple_repeat 1 28 0 616 247 0 32 chr18 36161481 36161639 -50515909 + FAM SINE Alu 15 167 -18 2092 113 3 10 chr18 36161755 36162056 -50515492 + AluSx SINE Alu 1 299 -13 4561 179 57 12 chr18 36162401 36163609 -50513939 - L1MD1 LINE L1 -18 6224 4966 451 244 8 8 chr18 36163609 36163728 -50513820 + L1MDa LINE L1 350 468 -6072 386 260 279 0 chr18 36163898 36164052 -50513496 + MIR SINE MIR 66 262 0 24 0 0 0 chr18 36164722 36164746 -50512802 + AT_rich Low_complexity Low_complexity 1 24 0 2454 65 0 3 chr18 36165161 36165468 -50512080 + AluY SINE Alu 1 306 -5 1718 166 0 0 chr18 36167238 36167503 -50510045 + AluSx SINE Alu 33 297 -15 429 221 30 30 chr18 36167723 36167854 -50509694 - MER94 DNA DNA -3 131 1 767 240 40 5 chr18 36167949 36168149 -50509399 - MER58A DNA MER1_type -8 216 10 413 200 36 27 chr18 36168294 36168404 -50509144 - MER8 DNA MER2_type 0 239 129 * 428 240 73 40 chr18 36168403 36168553 -50508995 - MER8 DNA MER2_type -62 177 23 227 284 15 30 chr18 36169409 36169476 -50508072 - L2 LINE L2 -1 3271 3206 192 152 0 0 chr18 36169476 36169509 -50508039 + (TG)n Simple_repeat Simple_repeat 2 34 0 212 320 186 48 chr18 36169541 36169772 -50507776 - L2 LINE L2 -17 3255 2993 384 271 0 0 chr18 36169800 36169885 -50507663 - L2 LINE L2 -4 3268 3184 417 275 94 13 chr18 36170312 36170461 -50507087 - MIR3 SINE MIR -25 183 23 33 25 0 0 chr18 36170594 36170634 -50506914 + AT_rich Low_complexity Low_complexity 1 40 0 1364 169 4 75 chr18 36170640 36170907 -50506641 + AluJo SINE Alu 11 258 -54 229 260 156 21 chr18 36170912 36171008 -50506540 + MIR SINE MIR 92 200 -62 234 164 55 27 chr18 36171391 36171464 -50506084 + L1MC4 LINE L1 7925 7999 -43 468 318 66 90 chr18 36171536 36172271 -50505277 - L2 LINE L2 -22 3250 2511 243 300 30 70 chr18 36172338 36172438 -50505110 - L2 LINE L2 0 3272 3177 1023 349 99 41 chr18 36172615 36172966 -50504582 - L2 LINE L2 -864 2450 2121 3047 132 10 0 chr18 36172966 36173450 -50504098 + L1MB3 LINE L1 5687 6175 -8 1023 349 99 41 chr18 36173450 36173912 -50503636 - L2 LINE L2 -1193 2121 1687 3766 123 30 11 chr18 36173912 36174539 -50503009 - L1MA5A LINE L1 -3 6294 5656 1023 349 99 41 chr18 36174539 36174923 -50502625 - L2 LINE L2 -1627 1687 1182 190 289 22 0 chr18 36175873 36175918 -50501630 - L2 LINE L2 -12 3260 3215 459 204 43 0 chr18 36175960 36176053 -50501495 - MIR SINE MIR -122 140 44 414 0 0 0 chr18 36176159 36176205 -50501343 + (TG)n Simple_repeat Simple_repeat 2 47 0 9945 194 26 25 chr18 36176335 36179906 -50497642 - L1PA16 LINE L1 -9 6157 2589 597 191 109 0 chr18 36179905 36180052 -50497496 - L1PA16 LINE L1 -3461 2685 2523 * 210 315 130 37 chr18 36181500 36181662 -50495886 - L2 LINE L2 -210 3062 2886 328 268 171 61 chr18 36181985 36182816 -50494732 + HAL1 LINE L1 899 1820 -687 2228 94 0 0 chr18 36183756 36184042 -50493506 + AluY SINE Alu 1 286 -25 240 35 0 0 chr18 36184042 36184071 -50493477 + (TA)n Simple_repeat Simple_repeat 1 29 0 1495 238 82 23 chr18 36187656 36188182 -50489366 + MLT1G1 LTR MaLR 1 557 -38 454 267 141 19 chr18 36188210 36188416 -50489132 - MLT1H1 LTR MaLR -2 553 323 487 296 141 5 chr18 36188547 36188760 -50488788 - MLT1H1 LTR MaLR -297 258 17 461 229 93 21 chr18 36188813 36188953 -50488595 - MIR SINE MIR -110 152 3 252 322 26 26 chr18 36189070 36189185 -50488363 - MLT1K LTR MaLR -314 274 160 21 36 0 0 chr18 36189742 36189770 -50487778 + AT_rich Low_complexity Low_complexity 1 28 0 244 240 222 47 chr18 36190997 36191168 -50486380 + MIR SINE MIR 60 260 -2 1375 232 29 108 chr18 36191246 36191815 -50485733 + L2 LINE L2 2773 3311 -2 209 33 33 0 chr18 36193313 36193343 -50484205 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 14431 20 0 0 chr18 36193579 36196050 -50481498 + L1PA3 LINE L1 3682 6155 0 239 345 39 24 chr18 36196151 36196357 -50481191 + L2 LINE L2 1908 2116 -1198 204 208 0 42 chr18 36196490 36196538 -50481010 - L2 LINE L2 0 3313 3268 192 234 160 21 chr18 36196954 36197048 -50480500 + L2 LINE L2 2747 2853 -461 185 191 0 24 chr18 36197275 36197317 -50480231 + MIR SINE MIR 163 203 -59 502 240 0 0 chr18 36197337 36197441 -50480107 - L2 LINE L2 -17 3296 3193 514 288 60 30 chr18 36197806 36198009 -50479539 - MIR SINE MIR -20 242 42 2070 118 30 0 chr18 36200454 36200751 -50476797 + AluSx SINE Alu 1 306 -6 495 180 90 0 chr18 36200973 36201073 -50476475 + MIR SINE MIR 61 169 -93 2223 109 3 0 chr18 36204747 36205050 -50472498 - AluSq SINE Alu -9 304 1 215 241 69 0 chr18 36206711 36206769 -50470779 - L2 LINE L2 0 3272 3211 1902 135 60 11 chr18 36208559 36208908 -50468640 - MSTA LTR MaLR -62 366 1 415 197 9 56 chr18 36208908 36209252 -50468296 + (TA)n Simple_repeat Simple_repeat 1 327 0 201 161 18 36 chr18 36209287 36209343 -50468205 + (TA)n Simple_repeat Simple_repeat 2 56 0 204 270 80 40 chr18 36209975 36210075 -50467473 - L2 LINE L2 -2 3270 3167 586 305 77 16 chr18 36212183 36212429 -50465119 + MIR SINE MIR 2 262 0 216 318 0 32 chr18 36212488 36212551 -50464997 + L2 LINE L2 3203 3263 -9 3225 210 56 7 chr18 36212604 36213410 -50464138 - L1ME1 LINE L1 -5 6161 5317 2342 108 0 0 chr18 36213635 36213942 -50463606 + AluSx SINE Alu 3 309 -3 1710 99 16 4 chr18 36214222 36214474 -50463074 + L1PA14 LINE L1 5904 6158 -3 1224 201 133 24 chr18 36215641 36216053 -50461495 - MLT1C LTR MaLR 0 467 11 510 17 0 0 chr18 36216059 36216118 -50461430 + (TG)n Simple_repeat Simple_repeat 2 60 0 2093 123 0 17 chr18 36216208 36216509 -50461039 + AluSg SINE Alu 1 296 -14 22 0 0 0 chr18 36216562 36216584 -50460964 + AT_rich Low_complexity Low_complexity 1 22 0 2142 132 0 0 chr18 36217543 36217847 -50459701 - AluSp SINE Alu -5 308 5 375 23 0 0 chr18 36218036 36218080 -50459468 + (TG)n Simple_repeat Simple_repeat 2 45 0 497 318 108 0 chr18 36219435 36219658 -50457890 + MIR SINE MIR 15 261 -1 278 370 22 22 chr18 36219662 36219800 -50457748 - MIR3 SINE MIR -49 159 22 786 279 82 26 chr18 36219998 36220303 -50457245 - L2 LINE L2 -3 3310 2989 190 281 35 0 chr18 36221361 36221418 -50456130 + L3b LINE CR1 1384 1442 -141 2470 59 0 13 chr18 36223642 36223948 -50453600 - AluY SINE Alu -9 302 1 1895 151 0 19 chr18 36224252 36224564 -50452984 + AluJo SINE Alu 1 306 -6 1208 41 0 0 chr18 36224672 36224819 -50452729 + L1PA3 LINE L1 6009 6155 0 239 345 39 24 chr18 36224921 36225127 -50452421 + L2 LINE L2 1908 2116 -1198 204 208 0 42 chr18 36225260 36225308 -50452240 - L2 LINE L2 0 3313 3268 192 234 160 21 chr18 36225724 36225818 -50451730 + L2 LINE L2 2747 2853 -461 185 191 0 24 chr18 36226045 36226087 -50451461 + MIR SINE MIR 163 203 -59 502 240 0 0 chr18 36226107 36226211 -50451337 - L2 LINE L2 -17 3296 3193 514 288 60 30 chr18 36226576 36226779 -50450769 - MIR SINE MIR -20 242 42 2093 111 30 7 chr18 36229224 36229522 -50448026 + AluSx SINE Alu 1 305 -7 1718 166 0 0 chr18 36231292 36231557 -50445991 + AluSx SINE Alu 33 297 -15 429 221 30 30 chr18 36231777 36231908 -50445640 - MER94 DNA DNA -3 131 1 767 240 40 5 chr18 36232003 36232203 -50445345 - MER58A DNA MER1_type -8 216 10 413 200 36 27 chr18 36232348 36232458 -50445090 - MER8 DNA MER2_type 0 239 129 * 428 240 73 40 chr18 36232457 36232607 -50444941 - MER8 DNA MER2_type -62 177 23 227 284 15 30 chr18 36233463 36233530 -50444018 - L2 LINE L2 -1 3271 3206 192 152 0 0 chr18 36233530 36233563 -50443985 + (TG)n Simple_repeat Simple_repeat 2 34 0 212 320 186 48 chr18 36233595 36233826 -50443722 - L2 LINE L2 -17 3255 2993 384 271 0 0 chr18 36233854 36233939 -50443609 - L2 LINE L2 -4 3268 3184 417 275 94 13 chr18 36234366 36234515 -50443033 - MIR3 SINE MIR -25 183 23 33 25 0 0 chr18 36234648 36234688 -50442860 + AT_rich Low_complexity Low_complexity 1 40 0 1364 169 4 75 chr18 36234694 36234961 -50442587 + AluJo SINE Alu 11 258 -54 229 260 156 21 chr18 36234966 36235062 -50442486 + MIR SINE MIR 92 200 -62 234 164 55 27 chr18 36235445 36235518 -50442030 + L1MC4 LINE L1 7925 7999 -43 1119 123 0 18 chr18 36235657 36235827 -50441721 + FRAM SINE Alu 10 176 0 711 168 18 114 chr18 36235839 36236006 -50441542 + AluSc SINE Alu 141 291 -18 2181 112 0 13 chr18 36236809 36237113 -50440435 + AluSx SINE Alu 1 300 -12 24 32 0 0 chr18 36237221 36237252 -50440296 + AT_rich Low_complexity Low_complexity 1 31 0 2394 90 7 0 chr18 36237340 36237650 -50439898 - AluSx SINE Alu 0 312 1 1560 201 61 87 chr18 36240053 36240629 -50436919 + L1MC5 LINE L1 6705 7265 -696 1124 215 87 74 chr18 36240827 36241422 -50436126 + L1MC5 LINE L1 7311 7913 -48 215 133 22 0 chr18 36241448 36241493 -50436055 + (TA)n Simple_repeat Simple_repeat 2 47 0 239 206 0 0 chr18 36241537 36241600 -50435948 + L1MC/D LINE L1 5425 5487 -846 336 341 94 57 chr18 36242535 36242960 -50434588 + L2 LINE L2 2827 3267 -5 898 210 6 0 chr18 36243032 36243199 -50434349 + FRAM SINE Alu 1 168 -8 239 272 33 54 chr18 36244866 36244958 -50432590 + MER5A DNA MER1_type 90 179 -10 180 97 0 0 chr18 36245084 36245115 -50432433 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 282 298 183 0 chr18 36247979 36248083 -50429465 - L2 LINE L2 -5 3267 3145 270 0 0 0 chr18 36249046 36249076 -50428472 + (CA)n Simple_repeat Simple_repeat 1 30 0 266 152 76 63 chr18 36250244 36250323 -50427225 - MIR SINE MIR -56 206 127 289 330 57 9 chr18 36251551 36251657 -50425891 - L2 LINE L2 -212 3060 2950 345 279 10 19 chr18 36252028 36252132 -50425416 - L2 LINE L2 0 3313 3211 22 70 0 0 chr18 36254296 36254339 -50423209 + AT_rich Low_complexity Low_complexity 1 43 0 1582 108 0 0 chr18 36255557 36255761 -50421787 + AluSg/x SINE Alu 98 301 -9 231 220 170 30 chr18 36257204 36257304 -50420244 - MIR3 SINE MIR 0 208 95 223 125 0 36 chr18 36257724 36257780 -50419768 + (TA)n Simple_repeat Simple_repeat 2 55 0 379 216 170 59 chr18 36258176 36258329 -50419219 + MIR SINE MIR 50 219 -43 826 300 117 14 chr18 36259102 36259247 -50418301 - L2 LINE L2 -1 3312 3183 1374 219 105 14 chr18 36259247 36259608 -50417940 - MSTD LTR MaLR -2 394 1 826 300 117 14 chr18 36259608 36260000 -50417548 - L2 LINE L2 -130 3183 2712 825 310 83 21 chr18 36260204 36260675 -50416873 - L2 LINE L2 -1303 2011 1512 4387 167 33 10 chr18 36260691 36261770 -50415778 + L1MB7 LINE L1 5058 6160 -24 5639 142 25 70 chr18 36261785 36261915 -50415633 + L1MA6 LINE L1 4067 4201 -2099 2322 112 0 0 chr18 36261915 36262227 -50415321 + AluSx SINE Alu 1 312 0 5639 142 25 70 chr18 36262227 36262597 -50414951 + L1MA6 LINE L1 4201 4586 -1714 1894 153 40 3 chr18 36262597 36262944 -50414604 + MER46B DNA MER2_type 1 235 -1 5639 142 25 70 chr18 36262944 36263287 -50414261 + L1MA6 LINE L1 4586 4943 -1357 2378 112 41 60 chr18 36263287 36263723 -50413825 - MSTA LTR MaLR 0 428 1 5639 142 25 70 chr18 36263723 36264396 -50413152 + L1MA6 LINE L1 4943 5436 -864 1907 142 13 3 chr18 36264396 36264699 -50412849 + AluSx SINE Alu 1 306 -6 5639 142 25 70 chr18 36264699 36265359 -50412189 + L1MA6 LINE L1 5436 6125 -175 895 86 53 7 chr18 36265563 36265714 -50411834 + L1MA6 LINE L1 6143 6300 0 242 303 114 8 chr18 36266048 36266180 -50411368 - LTR67 LTR ERVL -2 555 410 297 272 0 18 chr18 36266514 36266628 -50410920 + L1 LINE L1 4936 5047 -1099 429 20 0 0 chr18 36266825 36266875 -50410673 + (CA)n Simple_repeat Simple_repeat 2 51 0 331 224 216 0 chr18 36269405 36269530 -50408018 + MIR SINE MIR 41 192 -70 395 324 7 21 chr18 36270262 36270407 -50407141 + L3 LINE CR1 1429 1571 -6 1802 147 30 30 chr18 36270798 36271098 -50406450 + AluJo SINE Alu 1 300 -12 195 114 0 0 chr18 36271562 36271597 -50405951 + (CA)n Simple_repeat Simple_repeat 2 36 0 2547 85 16 0 chr18 36271742 36272105 -50405443 + L1P4 LINE L1 5450 5818 -343 2303 98 7 0 chr18 36272224 36272530 -50405018 + AluSq SINE Alu 1 308 -5 4541 87 30 1 chr18 36272725 36273381 -50404167 - L1MA1 LINE L1 0 6302 5628 35 0 0 0 chr18 36274618 36274653 -50402895 + AT_rich Low_complexity Low_complexity 1 35 0 888 283 172 39 chr18 36274724 36275416 -50402132 - L2 LINE L2 -746 2568 1785 216 306 93 104 chr18 36275427 36276083 -50401465 - L2 LINE L2 -1138 2176 1528 21 0 0 0 chr18 36276699 36276720 -50400828 + AT_rich Low_complexity Low_complexity 1 21 0 685 199 8 153 chr18 36279076 36279469 -50398079 - L1MEc LINE L1 -3402 2813 2478 6168 89 16 4 chr18 36279491 36281048 -50396500 - L1PA8A LINE L1 -28 6103 4530 1258 273 77 31 chr18 36281034 36281654 -50395894 - L1MEc LINE L1 -3883 2513 1865 * 734 222 115 0 chr18 36281674 36281926 -50395622 + MER33 DNA MER1_type 36 316 -8 1392 276 81 42 chr18 36281932 36283020 -50394528 - L1MEc LINE L1 -4522 1874 745 1942 120 57 17 chr18 36283639 36283939 -50393609 - AluSp SINE Alu 0 313 2 2198 137 31 17 chr18 36284254 36284612 -50392936 - MLT1A1 LTR MaLR -2 363 1 1881 157 4 0 chr18 36285093 36285373 -50392175 + AluJo SINE Alu 14 294 -18 753 259 82 8 chr18 36285392 36285635 -50391913 - MIR SINE MIR 0 262 2 3481 92 2 8 chr18 36286844 36287336 -50390212 - L1PB2 LINE L1 -3 6148 5660 370 399 70 15 chr18 36287457 36287730 -50389818 - L2 LINE L2 -44 3228 2941 1862 230 86 43 chr18 36287824 36288380 -50389168 - MLT1E LTR MaLR -13 580 1 327 372 97 14 chr18 36288436 36288643 -50388905 - L2 LINE L2 -633 2681 2458 673 234 176 37 chr18 36290046 36290437 -50387111 + L2 LINE L2 2611 3048 -265 636 261 21 86 chr18 36290766 36291057 -50386491 + L2 LINE L2 3042 3313 0 544 279 131 9 chr18 36291413 36291635 -50385913 - MIR SINE MIR -6 256 8 340 273 39 0 chr18 36293302 36293430 -50384118 + L1MC4 LINE L1 7688 7820 -222 269 310 220 37 chr18 36295265 36295533 -50382015 - L2 LINE L2 -15 3257 2941 2455 110 13 8 chr18 36295543 36295916 -50381632 - THE1C LTR MaLR 0 375 1 209 205 0 0 chr18 36296061 36296100 -50381448 + L2 LINE L2 3262 3300 -13 22 0 0 0 chr18 36296576 36296598 -50380950 + AT_rich Low_complexity Low_complexity 1 22 0 207 273 0 0 chr18 36296929 36296973 -50380575 - L2 LINE L2 -41 3231 3188 1224 244 114 61 chr18 36297314 36297971 -50379577 - L1MC4 LINE L1 -649 7393 6702 230 378 18 0 chr18 36298993 36299104 -50378444 - L2 LINE L2 -1 3312 3200 267 256 0 26 chr18 36299866 36299944 -50377604 - MER2 DNA MER2_type -1 344 269 1015 149 5 52 chr18 36299988 36300182 -50377366 - MER2 DNA MER2_type -160 185 1 1929 166 34 6 chr18 36302806 36303161 -50374387 - MLT1A1 LTR MaLR 0 365 1 565 232 79 53 chr18 36305565 36305755 -50371793 - MIR SINE MIR -47 215 21 484 275 180 20 chr18 36305800 36306000 -50371548 - MIR SINE MIR 0 262 31 201 347 54 88 chr18 36307814 36308053 -50369495 - L2 LINE L2 -47 3225 2995 481 200 23 192 chr18 36310040 36310300 -50367248 - MIR SINE MIR 0 262 47 201 74 0 0 chr18 36314539 36314566 -50362982 + (A)n Simple_repeat Simple_repeat 1 27 0 28865 122 21 24 chr18 36317335 36318181 -50359367 - L1PA8 LINE L1 -1 6486 5639 2143 103 0 0 chr18 36318181 36318463 -50359085 - AluSq SINE Alu -7 306 25 28865 122 21 24 chr18 36318463 36318475 -50359073 - L1PA8 LINE L1 -848 5639 5628 216 0 0 0 chr18 36318475 36318499 -50359049 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 28865 122 21 24 chr18 36318499 36324097 -50353451 - L1PA8 LINE L1 -859 5628 21 2358 92 0 0 chr18 36324907 36325202 -50352346 + AluSq SINE Alu 3 297 -16 1502 104 212 8 chr18 36325910 36326151 -50351397 - AluSg SINE Alu -10 290 1 35 54 0 0 chr18 36326505 36326561 -50350987 + AT_rich Low_complexity Low_complexity 1 56 0 258 241 0 0 chr18 36326567 36326621 -50350927 + Tigger5 DNA MER2_type 1 54 -2269 395 188 24 12 chr18 36326633 36326718 -50350830 + Tigger5 DNA MER2_type 2238 2323 0 932 158 0 0 chr18 36326718 36326864 -50350684 - MER2 DNA MER2_type -159 186 41 595 307 90 0 chr18 36327760 36327972 -50349576 + MIR SINE MIR 20 250 -12 2052 105 17 27 chr18 36327974 36328269 -50349279 + AluSx SINE Alu 1 292 -20 2145 123 0 3 chr18 36328269 36328570 -50348978 + AluSg SINE Alu 1 300 -10 529 132 28 9 chr18 36328570 36328676 -50348872 + GA-rich Low_complexity Low_complexity 2 109 0 2039 144 0 3 chr18 36329132 36329437 -50348111 + AluJo SINE Alu 1 304 -8 613 192 157 35 chr18 36329686 36329915 -50347633 + MLT1F LTR MaLR 286 542 0 287 299 73 29 chr18 36329988 36330125 -50347423 + MIR3 SINE MIR 58 200 -8 180 219 24 0 chr18 36330273 36330314 -50347234 + L2 LINE L2 3267 3308 -5 190 200 0 0 chr18 36331559 36331589 -50345959 + L2 LINE L2 3266 3295 -18 1223 181 139 4 chr18 36331605 36331730 -50345818 + AluJo SINE Alu 2 109 -203 189 0 0 0 chr18 36331730 36331751 -50345797 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1223 181 139 4 chr18 36331751 36331884 -50345664 + AluJo SINE Alu 109 295 -17 186 43 0 0 chr18 36331952 36331975 -50345573 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 747 181 17 9 chr18 36331978 36332094 -50345454 - FLAM_C SINE Alu -25 118 2 327 280 32 11 chr18 36332150 36332243 -50345305 + L2 LINE L2 3177 3271 -1 313 241 12 0 chr18 36332246 36332329 -50345219 + MIR SINE MIR 151 234 -28 204 339 105 24 chr18 36332813 36332937 -50344611 + L2 LINE L2 3107 3240 -32 1072 215 14 9 chr18 36333380 36333599 -50343949 + Charlie1b DNA MER1_type 1 220 -303 847 212 0 0 chr18 36334217 36334363 -50343185 + FRAM SINE Alu 1 145 -31 25 0 0 0 chr18 36336093 36336118 -50341430 + AT_rich Low_complexity Low_complexity 1 25 0 1124 158 5 68 chr18 36336370 36336592 -50340956 + AluJo SINE Alu 88 295 -17 2067 118 0 40 chr18 36337013 36337317 -50340231 + AluSx SINE Alu 1 292 -20 202 262 0 0 chr18 36337673 36337715 -50339833 - MIR SINE MIR -173 89 48 314 44 0 22 chr18 36338284 36338329 -50339219 + L1PA7 LINE L1 6108 6151 -3 32 26 0 0 chr18 36338330 36338369 -50339179 + AT_rich Low_complexity Low_complexity 1 39 0 260 294 5 102 chr18 36338435 36338622 -50338926 - L3 LINE CR1 -21 1556 1388 324 0 0 0 chr18 36340258 36340294 -50337254 + (TA)n Simple_repeat Simple_repeat 1 36 0 * 432 37 0 0 chr18 36340293 36340347 -50337201 + (GA)n Simple_repeat Simple_repeat 2 55 0 2059 105 42 3 chr18 36340539 36340825 -50336723 - AluSx SINE Alu -15 297 1 1834 178 124 23 chr18 36340952 36341395 -50336153 + L2 LINE L2 2030 2517 -797 377 102 34 17 chr18 36341428 36341487 -50336061 + MLT1C LTR MaLR 408 467 0 4934 87 19 3 chr18 36341711 36342353 -50335195 + L1PA14 LINE L1 5508 6159 -2 288 280 291 17 chr18 36343091 36343266 -50334282 - MIR SINE MIR -8 254 32 424 302 7 27 chr18 36343306 36343455 -50334093 - MIR SINE MIR -41 221 76 322 281 72 36 chr18 36343541 36343708 -50333840 - MIR3 SINE MIR -52 156 13 359 270 65 76 chr18 36344335 36344520 -50333028 - MIR SINE MIR -40 222 40 1757 158 0 34 chr18 36344561 36344873 -50332675 - AluJo SINE Alu 0 302 1 1114 193 37 58 chr18 36345250 36345576 -50331972 + MER46C DNA MER2_type 2 320 -18 919 158 61 6 chr18 36345683 36345847 -50331701 + MLT1B LTR MaLR 1 173 -217 281 161 32 0 chr18 36345864 36345926 -50331622 + CT-rich Low_complexity Low_complexity 2 65 0 1077 182 0 73 chr18 36345982 36346202 -50331346 + MLT1B LTR MaLR 187 390 0 22 0 0 0 chr18 36346202 36346224 -50331324 + AT_rich Low_complexity Low_complexity 1 22 0 230 216 78 0 chr18 36346398 36346449 -50331099 - L2 LINE L2 -8 3305 3251 * 830 209 71 11 chr18 36346418 36346600 -50330948 - MIR SINE MIR -26 236 44 276 267 7 59 chr18 36346594 36346729 -50330819 - L2 LINE L2 -70 3243 3116 * 2263 117 3 0 chr18 36346767 36347066 -50330482 + AluSq SINE Alu 1 300 -13 1014 211 25 57 chr18 36347190 36347470 -50330078 + L1ME1 LINE L1 7 277 -6119 1953 231 5 67 chr18 36347471 36348086 -50329462 + L1ME1 LINE L1 3037 3613 -2602 796 169 32 0 chr18 36348106 36348230 -50329318 + AluJb SINE Alu 164 291 -21 3331 218 43 37 chr18 36348235 36349383 -50328165 + L1ME1 LINE L1 5068 6230 -5 302 188 16 70 chr18 36349694 36349822 -50327726 - MLT1G3 LTR MaLR 0 555 443 * 726 192 158 20 chr18 36349810 36350013 -50327535 - MLT1G3 LTR MaLR -196 334 104 263 332 47 99 chr18 36350497 36350708 -50326840 + L2 LINE L2 3048 3247 -25 181 31 0 94 chr18 36351619 36351651 -50325897 + L2 LINE L2 3284 3312 -1 645 217 39 48 chr18 36351712 36351919 -50325629 + L2 LINE L2 3106 3310 -3 220 316 151 7 chr18 36352517 36352656 -50324892 - MIR SINE MIR -6 256 98 203 362 0 9 chr18 36353434 36353539 -50324009 + GA-rich Low_complexity Low_complexity 1 104 0 2383 50 30 3 chr18 36354210 36354508 -50323040 - AluY SINE Alu -5 306 1 400 282 25 37 chr18 36354883 36355069 -50322479 + MIR SINE MIR 15 202 -60 355 302 142 35 chr18 36355173 36355342 -50322206 + MIR3 SINE MIR 16 202 -6 201 156 0 0 chr18 36355695 36355727 -50321821 + (TG)n Simple_repeat Simple_repeat 1 32 0 28 0 0 0 chr18 36355978 36356006 -50321542 + AT_rich Low_complexity Low_complexity 1 28 0 1087 183 10 25 chr18 36356824 36357026 -50320522 + L1PB4 LINE L1 5951 6149 -7 21 0 0 0 chr18 36357026 36357047 -50320501 + AT_rich Low_complexity Low_complexity 1 21 0 668 301 56 0 chr18 36358456 36358652 -50318896 - MIR SINE MIR -8 254 48 737 258 146 43 chr18 36358681 36359127 -50318421 + LTR33 LTR ERVL 28 519 -2 185 279 0 0 chr18 36359128 36359171 -50318377 - MIR SINE MIR -217 45 3 21 57 0 0 chr18 36359373 36359408 -50318140 + AT_rich Low_complexity Low_complexity 1 35 0 637 165 1 28 chr18 36359562 36359705 -50317843 - MLT1B LTR MaLR -192 182 57 623 279 139 16 chr18 36359733 36360049 -50317499 - L1MC/D LINE L1 -2058 5750 5396 1216 212 0 5 chr18 36361355 36361577 -50315971 - MER58A DNA MER1_type -3 221 1 866 198 104 16 chr18 36361634 36361826 -50315722 - MIR SINE MIR -26 236 28 800 177 14 0 chr18 36362236 36362383 -50315165 + MLT1A1 LTR MaLR 171 319 -46 226 100 100 0 chr18 36363247 36363287 -50314261 - L2 LINE L2 -15 3257 3214 639 188 14 51 chr18 36363329 36363467 -50314081 + FLAM_C SINE Alu 1 133 0 576 146 7 126 chr18 36363499 36363650 -50313898 - FLAM_A SINE Alu 0 133 1 326 224 199 64 chr18 36364465 36364621 -50312927 - MIR SINE MIR -70 192 16 640 300 83 4 chr18 36365325 36365565 -50311983 + MIR SINE MIR 3 261 -1 198 228 81 73 chr18 36366028 36366164 -50311384 - MIR SINE MIR -28 234 98 540 200 77 39 chr18 36366199 36366286 -50311262 + MER2 DNA MER2_type 1 96 -249 2098 130 10 0 chr18 36366286 36366587 -50310961 - AluSq SINE Alu -9 304 1 540 200 77 39 chr18 36366587 36366629 -50310919 + MER2 DNA MER2_type 96 135 -210 198 0 0 0 chr18 36366631 36366653 -50310895 + (TAAAA)n Simple_repeat Simple_repeat 1 22 0 1119 229 106 18 chr18 36366669 36367064 -50310484 - MER65C LTR ERV1 -43 488 1 564 188 161 5 chr18 36367064 36367250 -50310298 + MER2 DNA MER2_type 131 345 0 1736 22 124 4 chr18 36367351 36367577 -50309971 - AluY SINE Alu -12 299 47 1731 181 10 3 chr18 36367773 36368072 -50309476 + AluJo SINE Alu 1 301 -11 530 287 55 16 chr18 36369468 36369722 -50307826 - L1MC4a LINE L1 -1916 5892 5629 355 314 92 29 chr18 36369767 36369974 -50307574 - L1ME4a LINE L1 -208 5913 5694 295 253 282 42 chr18 36370074 36370315 -50307233 + MER115 DNA AcHobo 151 449 -244 2195 129 0 0 chr18 36370661 36370963 -50306585 + AluSx SINE Alu 1 302 -10 2117 151 0 0 chr18 36372469 36372781 -50304767 + AluJb SINE Alu 1 312 0 189 0 0 0 chr18 36374092 36374113 -50303435 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 222 125 89 0 chr18 36374141 36374197 -50303351 + (TATAA)n Simple_repeat Simple_repeat 4 64 0 368 222 42 7 chr18 36374219 36374363 -50303185 + (TA)n Simple_repeat Simple_repeat 1 149 0 5477 217 58 40 chr18 36375284 36377234 -50300314 + L1MDb LINE L1 44 2078 -4462 41014 32 21 1 chr18 36377236 36383266 -50294282 + L1PA2 LINE L1 1 6154 -1 1271 206 43 36 chr18 36383267 36383507 -50294041 + L1MDb LINE L1 2075 2312 -4228 180 111 0 0 chr18 36383507 36383534 -50294014 + (TA)n Simple_repeat Simple_repeat 2 28 0 1271 206 43 36 chr18 36383534 36383624 -50293924 + L1MDb LINE L1 2312 2411 -4129 2192 75 17 7 chr18 36383624 36383918 -50293630 - AluY SINE Alu -14 297 1 1271 206 43 36 chr18 36383918 36383979 -50293569 + L1MDb LINE L1 2411 2470 -4070 * 3259 162 34 36 chr18 36383977 36384672 -50292876 - L1MB3 LINE L1 -278 6141 5446 744 211 0 0 chr18 36384672 36384805 -50292743 - FLAM_A SINE Alu 0 133 1 3259 162 34 36 chr18 36384805 36384870 -50292678 - L1MB3 LINE L1 -973 5446 5401 1820 167 17 7 chr18 36384870 36385164 -50292384 - AluJo SINE Alu -15 297 1 3259 162 34 36 chr18 36385164 36385223 -50292325 - L1MB3 LINE L1 -1018 5401 5343 * 7094 143 79 50 chr18 36385198 36385509 -50292039 - L1MB3 LINE L1 -4783 1601 1301 2281 120 3 0 chr18 36385509 36385818 -50291730 - AluSx SINE Alu -2 310 1 7094 143 79 50 chr18 36385818 36387042 -50290506 - L1MB3 LINE L1 -5083 1301 21 345 214 36 0 chr18 36387182 36387266 -50290282 + L1MD1 LINE L1 6136 6222 -20 410 288 144 0 chr18 36387295 36387441 -50290107 + MIR SINE MIR 41 207 -55 2250 99 120 3 chr18 36387484 36387866 -50289682 + LTR7 LTR ERV1 22 448 -2 14338 102 11 19 chr18 36387869 36390641 -50286907 + HERVH LTR ERV1 1 2995 -4718 5542 98 2 8 chr18 36390620 36391479 -50286069 + HERVH LTR ERV1 3140 3993 -3720 * 1203 106 0 0 chr18 36391481 36391661 -50285887 + HERVH LTR ERV1 4488 4667 -3046 * 12599 90 25 6 chr18 36391660 36393566 -50283982 + HERVH LTR ERV1 5772 7713 0 2552 84 119 7 chr18 36393566 36393969 -50283579 + LTR7 LTR ERV1 1 448 -2 1201 142 5 32 chr18 36393971 36394189 -50283359 - L1M4c LINE L1 -6153 231 20 335 214 36 0 chr18 36394328 36394412 -50283136 + L1MD1 LINE L1 6136 6222 -20 325 284 184 0 chr18 36394438 36394579 -50282969 + MIR SINE MIR 41 207 -55 4229 188 11 3 chr18 36394586 36395464 -50282084 - L1P LINE L1 -991 5155 4271 4576 97 15 12 chr18 36395464 36396133 -50281415 + L1PA13 LINE L1 5464 6144 -19 189 159 0 0 chr18 36396136 36396180 -50281368 + A-rich Low_complexity Low_complexity 1 44 0 331 331 36 21 chr18 36396589 36396976 -50280572 + L1MC4a LINE L1 4777 5169 -977 213 224 0 0 chr18 36396981 36397030 -50280518 + A-rich Low_complexity Low_complexity 2 50 0 871 246 42 48 chr18 36397070 36397448 -50280100 + L1MC4a LINE L1 5683 6058 -1750 1649 182 25 0 chr18 36397756 36398036 -50279512 + AluJo SINE Alu 1 287 -25 266 71 0 24 chr18 36398347 36398389 -50279159 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 3965 105 76 3 chr18 36398527 36399116 -50278432 - MER51A LTR ERV1 0 634 3 1839 154 0 0 chr18 36399118 36399391 -50278157 + AluSx SINE Alu 31 303 -9 2308 102 0 0 chr18 36399736 36400031 -50277517 + AluSg SINE Alu 1 295 -15 2625 112 3 3 chr18 36400110 36400485 -50277063 + THE1C LTR MaLR 1 375 0 326 191 36 48 chr18 36400638 36400653 -50276895 + L2 LINE L2 3223 3237 -76 2527 108 7 71 chr18 36400653 36401035 -50276513 + Tigger2a DNA MER2_type 1 406 -2302 1492 160 10 67 chr18 36401035 36401348 -50276200 + AluJo SINE Alu 5 299 -13 1942 154 3 3 chr18 36401356 36401654 -50275894 - AluJo SINE Alu -14 298 1 2527 108 7 71 chr18 36401654 36401726 -50275822 + Tigger2a DNA MER2_type 413 434 0 326 191 36 48 chr18 36401726 36401794 -50275754 + L2 LINE L2 3237 3305 -8 2351 93 3 3 chr18 36402059 36402371 -50275177 - AluSq SINE Alu -1 312 1 32 0 0 0 chr18 36402451 36402483 -50275065 + AT_rich Low_complexity Low_complexity 1 32 0 1344 166 7 84 chr18 36404081 36404212 -50273336 + AluJb SINE Alu 6 146 -166 342 0 0 0 chr18 36404212 36404250 -50273298 + (CA)n Simple_repeat Simple_repeat 2 39 0 1344 166 7 84 chr18 36404250 36404426 -50273122 + AluJb SINE Alu 146 289 -23 22 0 0 30 chr18 36404544 36404560 -50272988 + AT_rich Low_complexity Low_complexity 1 16 -16 2244 66 0 7 chr18 36404560 36404847 -50272701 + AluY SINE Alu 1 285 -26 22 0 0 30 chr18 36404847 36404863 -50272685 + AT_rich Low_complexity Low_complexity 16 32 0 28 71 0 0 chr18 36405334 36405390 -50272158 + AT_rich Low_complexity Low_complexity 1 56 0 1031 179 9 42 chr18 36406454 36406666 -50270882 + AluJo SINE Alu 1 205 -107 231 286 71 0 chr18 36406965 36407035 -50270513 - MER5A DNA MER1_type -28 161 87 939 221 67 0 chr18 36407219 36407427 -50270121 - MIR SINE MIR -40 222 1 24 32 0 0 chr18 36407680 36407711 -50269837 + AT_rich Low_complexity Low_complexity 1 31 0 314 260 20 10 chr18 36408679 36408779 -50268769 + MER74B LTR ERVL 522 622 0 277 233 82 41 chr18 36408921 36408994 -50268554 - L2 LINE L2 -47 3266 3191 927 156 0 0 chr18 36409116 36409244 -50268304 + FLAM_C SINE Alu 1 128 -5 1198 283 92 53 chr18 36409983 36410569 -50266979 + MLT1L LTR MaLR 5 613 -2 683 236 169 39 chr18 36410725 36411110 -50266438 + MLT1F LTR MaLR 106 540 -2 2167 43 16 0 chr18 36411912 36412170 -50265378 - AluY SINE Alu -8 303 42 180 0 0 0 chr18 36412817 36412837 -50264711 + (TTAG)n Simple_repeat Simple_repeat 4 23 0 821 244 122 17 chr18 36413328 36413681 -50263867 + MER113 DNA MER1_type? 131 520 -1 558 334 130 52 chr18 36415096 36416572 -50260976 - L2 LINE L2 -165 3107 1527 445 296 281 4 chr18 36418297 36418567 -50258981 - L2 LINE L2 -4 3268 2924 2369 82 16 0 chr18 36419123 36419426 -50258122 - AluSp SINE Alu -5 308 1 1757 172 13 3 chr18 36420015 36420317 -50257231 + AluJo SINE Alu 1 305 -7 203 349 30 0 chr18 36420404 36420470 -50257078 - MIR SINE MIR -166 96 29 250 269 123 23 chr18 36420541 36420797 -50256751 + L1ME4a LINE L1 5366 5679 -442 2413 94 3 7 chr18 36420826 36421135 -50256413 + AluSx SINE Alu 1 308 -4 378 202 162 7 chr18 36421149 36421380 -50256168 + L1ME4a LINE L1 5834 6113 -8 333 232 42 11 chr18 36422653 36422748 -50254800 + L1ME4a LINE L1 5964 6061 -60 1713 123 103 56 chr18 36422966 36423324 -50254224 + THE1C LTR MaLR 1 375 0 337 306 146 86 chr18 36424034 36424302 -50253246 + L2 LINE L2 2969 3252 -20 21 36 0 0 chr18 36426466 36426494 -50251054 + AT_rich Low_complexity Low_complexity 1 28 0 327 264 144 16 chr18 36426865 36426990 -50250558 - MIR SINE MIR -120 142 2 21 0 0 0 chr18 36427650 36427671 -50249877 + AT_rich Low_complexity Low_complexity 1 21 0 1825 135 49 10 chr18 36427732 36428020 -50249528 + AluSx SINE Alu 1 299 -13 192 40 0 0 chr18 36428212 36428237 -50249311 + (TTG)n Simple_repeat Simple_repeat 2 26 0 1680 171 17 24 chr18 36428239 36428532 -50249016 - AluJo SINE Alu -21 291 1 963 240 130 56 chr18 36428729 36428799 -50248749 + LTR16A1 LTR ERVL 19 82 -375 2023 159 87 6 chr18 36428799 36429133 -50248415 + MLT1A1 LTR MaLR 5 365 0 963 240 130 56 chr18 36429133 36429454 -50248094 + LTR16A1 LTR ERVL 82 439 -18 288 352 19 9 chr18 36429870 36429978 -50247570 + L3 LINE CR1 1039 1147 -430 2502 87 0 0 chr18 36430046 36430356 -50247192 + AluSg SINE Alu 1 310 0 2117 140 51 63 chr18 36430494 36430649 -50246899 - MLT1B LTR MaLR -1 389 234 1754 167 49 0 chr18 36430649 36430936 -50246612 - AluSx SINE Alu -11 301 1 2117 140 51 63 chr18 36430936 36431174 -50246374 - MLT1B LTR MaLR -156 234 1 7755 118 11 35 chr18 36431316 36433315 -50244233 - L1PA10 LINE L1 -1 6167 4187 629 195 182 17 chr18 36433860 36434063 -50243485 + LTR41 LTR ERVL 1 259 -536 763 188 79 118 chr18 36434156 36434460 -50243088 + LTR41 LTR ERVL 464 755 -18 1150 154 0 16 chr18 36434548 36434730 -50242818 + FRAM SINE Alu 1 176 0 200 246 206 80 chr18 36436221 36436322 -50241226 - MIR SINE MIR -3 259 172 2447 55 14 0 chr18 36436322 36436615 -50240933 + AluY SINE Alu 2 298 -13 200 246 206 80 chr18 36436615 36436712 -50240836 - MIR SINE MIR -90 172 36 726 284 102 0 chr18 36436747 36436962 -50240586 - MIR SINE MIR -6 256 20 195 313 113 89 chr18 36437146 36437482 -50240066 - L2 LINE L2 -4 3268 2925 214 262 167 0 chr18 36437569 36437653 -50239895 + MER5B DNA MER1_type 77 174 -4 200 274 103 34 chr18 36437871 36437988 -50239560 - L2 LINE L2 -785 2529 2405 2508 62 3 0 chr18 36438114 36438422 -50239126 - AluY SINE Alu -2 309 1 845 145 0 8 chr18 36438453 36438570 -50238978 + FLAM_C SINE Alu 1 116 -17 207 236 28 0 chr18 36439161 36439233 -50238315 + (TA)n Simple_repeat Simple_repeat 2 75 0 288 176 39 0 chr18 36440617 36440668 -50236880 + MER3 DNA MER1_type 37 89 -120 435 136 204 11 chr18 36441005 36441093 -50236455 + LTR47A LTR ERVL 339 443 -9 * 497 224 9 9 chr18 36441090 36441206 -50236342 + MER3 DNA MER1_type 94 209 0 632 213 48 9 chr18 36441582 36441750 -50235798 + L1MC3 LINE L1 7588 7978 -17 310 243 52 0 chr18 36441911 36442024 -50235524 - L1MDb LINE L1 -5100 1296 1169 947 169 0 0 chr18 36442040 36442194 -50235354 - AluSg/x SINE Alu -15 295 142 5069 119 33 71 chr18 36442194 36443049 -50234499 - LTR12 LTR ERV1 0 826 5 1843 191 67 29 chr18 36443065 36443620 -50233928 - pTR5 LTR ERV1 -1094 1344 769 1157 98 13 7 chr18 36443633 36443786 -50233762 - AluSq SINE Alu -159 154 1 2080 105 24 14 chr18 36443807 36444101 -50233447 - AluSx SINE Alu -15 297 1 3277 119 2 15 chr18 36444117 36444178 -50233370 - L1MB3 LINE L1 -9 6174 6114 2082 142 50 39 chr18 36444178 36444538 -50233010 - THE1B LTR MaLR 0 364 1 3277 119 2 15 chr18 36444538 36444956 -50232592 - L1MB3 LINE L1 -69 6114 5701 1201 181 98 4 chr18 36444970 36445236 -50232312 - L1MB3 LINE L1 -1141 5005 4715 2145 76 6 70 chr18 36445479 36445793 -50231755 - AluY SINE Alu -17 294 1 371 265 43 47 chr18 36446347 36446581 -50230967 - L1M4 LINE L1 -959 5187 4955 283 315 167 34 chr18 36446774 36447301 -50230247 + L2 LINE L2 1219 1815 -1499 1877 190 104 31 chr18 36447311 36447831 -50229717 - L1M4 LINE L1 -2163 3983 3426 7385 104 7 1 chr18 36447832 36448822 -50228726 + THE1C-int LTR MaLR 585 1580 0 2974 92 19 0 chr18 36448822 36449190 -50228358 + THE1C LTR MaLR 1 375 0 697 190 0 0 chr18 36449190 36449306 -50228242 + Tigger3(Golem) DNA MER2_type 2913 3028 -1 822 203 52 35 chr18 36449306 36449596 -50227952 - L1M4 LINE L1 -3017 3129 2835 3883 185 80 5 chr18 36449812 36450624 -50226924 - MLT1C-int LTR MaLR -484 887 15 1467 211 60 6 chr18 36450626 36450957 -50226591 - MLT1C LTR MaLR -31 436 88 2042 195 33 24 chr18 36450957 36451410 -50226138 - MLT1A1 LTR MaLR 0 365 1 1915 161 3 3 chr18 36451450 36451748 -50225800 + AluJb SINE Alu 1 298 -14 204 40 0 0 chr18 36451856 36451881 -50225667 + (CA)n Simple_repeat Simple_repeat 2 26 0 661 203 105 118 chr18 36453593 36453898 -50223650 + ERVL-F LTR ERVL 5456 5756 -8 1918 231 48 22 chr18 36453900 36454500 -50223048 + MLT2F LTR ERVL 3 663 0 1584 150 0 31 chr18 36454557 36454811 -50222737 + AluSx SINE Alu 1 246 -66 8186 181 50 66 chr18 36454811 36456595 -50220953 - MER52A LTR ERV1 0 1755 1 330 121 0 35 chr18 36456599 36456657 -50220891 + AluSx SINE Alu 246 301 0 7213 219 103 45 chr18 36456657 36459320 -50218228 + L1ME1 LINE L1 2429 5428 -738 1620 206 0 3 chr18 36459320 36459630 -50217918 - AluJb SINE Alu -3 309 1 7213 219 103 45 chr18 36459630 36460409 -50217139 + L1ME1 LINE L1 5428 6161 -5 2005 108 11 28 chr18 36460411 36460729 -50216819 - AluSx SINE Alu 0 313 1 231 175 0 105 chr18 36461233 36461290 -50216258 + Charlie1 DNA MER1_type 1 51 -2710 217 186 69 88 chr18 36461303 36461405 -50216143 - MER5A DNA MER1_type -68 121 22 222 329 151 7 chr18 36462981 36463127 -50214421 + MIR SINE MIR 15 181 -81 521 242 93 99 chr18 36463136 36463438 -50214110 - MLT1H1 LTR MaLR -9 546 234 243 325 12 25 chr18 36463531 36463611 -50213937 - MLT1H1 LTR MaLR -438 104 26 1806 179 0 16 chr18 36463629 36463942 -50213606 + AluJo SINE Alu 1 308 -4 588 264 44 11 chr18 36464602 36464784 -50212764 - L2 LINE L2 -18 3295 3108 998 242 78 117 chr18 36464785 36465322 -50212226 - LTR33 LTR ERVL 0 521 6 1720 317 50 33 chr18 36465551 36466359 -50211189 - ERVL LTR ERVL -420 5344 4524 1328 294 63 19 chr18 36466405 36466830 -50210718 - ERVL LTR ERVL -1335 4429 3986 1906 212 79 48 chr18 36516836 36517434 -50160114 + MER21B LTR ERV1 197 812 -51 232 261 250 0 chr18 36518114 36518206 -50159342 - L2 LINE L2 -2 3270 3156 258 32 0 0 chr18 36518776 36518807 -50158741 + (CA)n Simple_repeat Simple_repeat 2 32 0 1540 188 71 14 chr18 36519435 36519926 -50157622 + L1MC3 LINE L1 6530 7124 -661 434 198 75 0 chr18 36519900 36520006 -50157542 + L1MD3 LINE L1 7343 7456 -539 * 943 185 10 26 chr18 36520008 36520203 -50157345 - MER20 DNA MER1_type 0 219 28 483 200 8 25 chr18 36520231 36520351 -50157197 + L1MD3 LINE L1 7467 7584 -411 4894 208 86 18 chr18 36520357 36520629 -50156919 + L1M3 LINE L1 3287 3539 -2607 2250 58 7 65 chr18 36520629 36520938 -50156610 + AluY SINE Alu 1 291 -20 4894 208 86 18 chr18 36520938 36521571 -50155977 + L1M3 LINE L1 3539 4128 -2018 297 0 0 0 chr18 36521571 36521604 -50155944 + (CA)n Simple_repeat Simple_repeat 1 33 0 4894 208 86 18 chr18 36521604 36522047 -50155501 + L1M3 LINE L1 4128 4739 -1407 796 188 0 0 chr18 36522047 36522180 -50155368 + FLAM_A SINE Alu 1 133 0 4894 208 86 18 chr18 36522180 36522241 -50155307 + L1M3 LINE L1 4739 4794 -1352 956 195 75 49 chr18 36522247 36522686 -50154862 + LTR56 LTR ERV1 9 445 0 1744 180 47 31 chr18 36522695 36523169 -50154379 + L1M3 LINE L1 4791 5256 -924 2225 86 0 10 chr18 36523169 36523482 -50154066 + AluY SINE Alu 1 311 0 1744 180 47 31 chr18 36523482 36523753 -50153795 + L1M3 LINE L1 5256 5728 -452 604 256 103 35 chr18 36523959 36524412 -50153136 + L1MEc LINE L1 2081 2534 -3681 269 224 90 15 chr18 36524412 36524479 -50153069 + LTR35 LTR ERV1 1 72 -546 1888 152 3 3 chr18 36524680 36524985 -50152563 - AluJb SINE Alu 0 305 1 415 260 34 75 chr18 36525130 36525276 -50152272 + LTR35 LTR ERV1 462 601 -17 461 275 73 28 chr18 36525342 36525520 -50152028 + LTR35-int LTR ERV1 452 637 -5309 8275 177 80 77 chr18 36525981 36528225 -50149323 + LTR35-int LTR ERV1 880 3116 -2882 1820 175 3 3 chr18 36528225 36528522 -50149026 + AluJb SINE Alu 1 297 -15 8275 177 80 77 chr18 36528522 36529220 -50148328 + LTR35-int LTR ERV1 3116 3810 -2188 1959 146 3 14 chr18 36529220 36529515 -50148033 + AluSx SINE Alu 1 292 -20 8275 177 80 77 chr18 36529515 36529826 -50147722 + LTR35-int LTR ERV1 3810 5790 -208 1004 137 96 60 chr18 36529846 36530095 -50147453 + LTR35-int LTR ERV1 5914 6171 -160 406 190 92 35 chr18 36530202 36530344 -50147204 + LTR35-int LTR ERV1 6526 6675 -1 230 275 87 0 chr18 36530344 36530413 -50147135 + LTR35 LTR ERV1 1 75 -543 309 243 56 102 chr18 36530611 36530940 -50146608 + LTR35 LTR ERV1 351 670 -9 267 333 0 0 chr18 36531211 36531328 -50146220 + L1MEc LINE L1 2738 2854 -3361 534 196 143 0 chr18 36531390 36531523 -50146025 + MER3 DNA MER1_type 58 209 0 552 248 139 6 chr18 36531572 36531911 -50145637 + L1MEc LINE L1 2948 3331 -2884 1279 99 6 0 chr18 36531990 36532161 -50145387 + AluSp SINE Alu 124 295 -18 406 284 42 13 chr18 36532162 36532401 -50145147 + L1MEc LINE L1 3464 3709 -2506 789 234 81 10 chr18 36532869 36533078 -50144470 + MER58A DNA MER1_type 1 224 0 202 229 0 0 chr18 36533156 36533204 -50144344 + A-rich Low_complexity Low_complexity 1 48 0 597 171 17 0 chr18 36533475 36533592 -50143956 - L1MC4 LINE L1 -5 8037 7919 217 128 43 0 chr18 36533706 36533753 -50143795 + (TA)n Simple_repeat Simple_repeat 2 50 0 297 95 0 63 chr18 36533766 36533829 -50143719 - LTR49 LTR ERV1 -78 517 459 282 152 0 0 chr18 36533844 36533890 -50143658 - L1MC4 LINE L1 -144 7898 7853 369 244 168 0 chr18 36533890 36534009 -50143539 - L2 LINE L2 -537 2777 2639 492 240 70 8 chr18 36534009 36534138 -50143410 - L2 LINE L2 -862 2452 2316 1247 244 102 27 chr18 36534684 36535094 -50142454 - L2 LINE L2 -993 2321 1881 1549 243 70 53 chr18 36535125 36535497 -50142051 - L1MCa LINE L1 -2836 3379 3015 3514 118 14 26 chr18 36535497 36536084 -50141464 - L1MC1 LINE L1 -15 6318 5739 1549 243 70 53 chr18 36536084 36536908 -50140640 - L1MCa LINE L1 -3200 3015 2114 689 192 8 15 chr18 36536908 36537038 -50140510 - FLAM_A SINE Alu -4 129 1 1549 243 70 53 chr18 36537038 36537073 -50140475 - L1MCa LINE L1 -4101 2114 2081 433 56 0 0 chr18 36537073 36537127 -50140421 - Alu SINE Alu -250 63 10 340 194 256 8 chr18 36537221 36537350 -50140198 - L1MCa LINE L1 -5652 744 584 615 172 197 0 chr18 36537406 36537528 -50140020 - MER20 DNA MER1_type -73 146 1 1621 237 86 8 chr18 36537530 36538033 -50139515 - L1MCa LINE L1 -5811 585 44 501 244 88 24 chr18 36538040 36538245 -50139303 - L2 LINE L2 -1622 1692 1475 827 259 99 48 chr18 36538526 36539084 -50138464 + L2 LINE L2 2717 3308 -5 895 250 128 32 chr18 36539720 36540096 -50137452 - MLT1K LTR MaLR -32 556 145 406 256 177 55 chr18 36540178 36540432 -50137116 + L1MC/D LINE L1 5290 5548 -573 227 279 63 9 chr18 36540455 36540566 -50136982 + L1MC/D LINE L1 5610 5726 -2082 668 269 218 5 chr18 36540878 36541295 -50136253 + L1MC/D LINE L1 5315 5820 -1988 357 148 114 11 chr18 36541340 36541428 -50136120 + MIR SINE MIR 134 230 -32 187 326 0 0 chr18 36543542 36543585 -50133963 + L2 LINE L2 3209 3251 -21 22 0 0 0 chr18 36545207 36545229 -50132319 + AT_rich Low_complexity Low_complexity 1 22 0 383 280 10 10 chr18 36548236 36548336 -50129212 + MER58 DNA MER1_type 1 100 -241 334 156 361 0 chr18 36548419 36548541 -50129007 + MER58 DNA MER1_type 106 271 -2149 3084 131 62 13 chr18 36548566 36549115 -50128433 + Tigger3b DNA MER2_type 1 576 -655 868 188 6 18 chr18 36549117 36549282 -50128266 + FRAM SINE Alu 1 163 -3 344 131 33 0 chr18 36549296 36549357 -50128191 + AluS SINE Alu 2 64 -235 1396 137 13 0 chr18 36549462 36549688 -50127860 + Tigger3b DNA MER2_type 1001 1229 -2 258 125 0 0 chr18 36549690 36549730 -50127818 + MER58 DNA MER1_type 2377 2416 -4 21 36 0 0 chr18 36551369 36551397 -50126151 + GC_rich Low_complexity Low_complexity 1 28 0 522 270 69 30 chr18 36551598 36551810 -50125738 - MIR SINE MIR -19 243 34 250 265 58 69 chr18 36551964 36552153 -50125395 + L2 LINE L2 2691 2877 -437 560 273 65 35 chr18 36552155 36552386 -50125162 + L2 LINE L2 3076 3313 0 751 150 39 0 chr18 36552931 36553058 -50124490 - AluJ SINE Alu -16 296 165 766 191 79 0 chr18 36553212 36553243 -50124305 - AluJ SINE Alu -148 164 137 207 0 0 0 chr18 36553243 36553266 -50124282 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 766 191 79 0 chr18 36553266 36553386 -50124162 - AluJ SINE Alu -175 137 1 970 200 29 15 chr18 36553605 36553810 -50123738 + REP3 LTR ERV 6 213 -349 758 213 28 0 chr18 36554098 36554239 -50123309 - FRAM SINE Alu -30 146 2 887 209 6 0 chr18 36554439 36554602 -50122946 + AluJb SINE Alu 137 300 -12 247 204 0 0 chr18 36555001 36555050 -50122498 + MLT1L LTR MaLR 196 244 -371 674 184 47 90 chr18 36555050 36555349 -50122199 - L1M4 LINE L1 -2724 3422 3137 2983 228 71 25 chr18 36555407 36555802 -50121746 - L1ME1 LINE L1 -81 6085 5710 2375 81 17 0 chr18 36555802 36556098 -50121450 + AluSx SINE Alu 1 301 -11 2983 228 71 25 chr18 36556098 36556986 -50120562 - L1ME1 LINE L1 -456 5710 4740 1458 155 0 13 chr18 36557000 36557232 -50120316 + AluJo SINE Alu 1 229 -83 1353 94 14 22 chr18 36557333 36557556 -50119992 + HERVH LTR ERV1 7493 7713 0 2788 80 92 5 chr18 36557556 36557968 -50119580 + LTR7 LTR ERV1 1 448 -2 385 73 15 15 chr18 36558081 36558149 -50119399 + L1MB4 LINE L1 6113 6180 0 25 0 0 0 chr18 36558375 36558400 -50119148 + AT_rich Low_complexity Low_complexity 1 25 0 257 125 0 0 chr18 36558406 36558446 -50119102 - Alu SINE Alu -11 291 252 406 277 96 102 chr18 36558511 36558843 -50118705 + L1ME LINE L1 494 823 -5573 1093 265 51 41 chr18 36558874 36559440 -50118108 + L1ME LINE L1 776 1347 -5062 * 1802 250 55 21 chr18 36559423 36559905 -50117643 + L1M4 LINE L1 3664 4173 -1973 1702 176 13 20 chr18 36559905 36560207 -50117341 + AluJo SINE Alu 1 300 -12 1802 250 55 21 chr18 36560207 36560347 -50117201 + L1M4 LINE L1 4173 4307 -1839 1916 148 43 23 chr18 36560347 36560751 -50116797 - MSTA LTR MaLR 0 432 1 8016 165 46 9 chr18 36560751 36562341 -50115207 - MSTA-int LTR MaLR 0 1651 1 2814 135 24 12 chr18 36562342 36562764 -50114784 - MSTA LTR MaLR -1 427 1 542 172 11 0 chr18 36562764 36562857 -50114691 - MLT1A2 LTR MaLR -280 94 1 374 214 38 69 chr18 36562857 36562941 -50114607 + L1M4 LINE L1 4303 4381 -1765 1846 154 3 27 chr18 36562941 36563240 -50114308 + AluSx SINE Alu 1 292 -20 374 214 38 69 chr18 36563240 36563314 -50114234 + L1M4 LINE L1 4381 4456 -1690 2643 110 93 5 chr18 36563785 36564195 -50113353 - LTR7 LTR ERV1 -2 448 3 2090 140 48 19 chr18 36564198 36564577 -50112971 - HERVH LTR ERV1 0 7713 7324 1430 118 17 38 chr18 36564577 36564814 -50112734 - HERVH LTR ERV1 -1894 5819 5588 * 4401 145 0 3 chr18 36564794 36565458 -50112090 - HERVH LTR ERV1 -2564 5149 4488 5957 103 3 2 chr18 36565460 36566313 -50111235 - HERVH LTR ERV1 -3720 3993 3140 * 14995 98 15 33 chr18 36566292 36569031 -50108517 - HERVH LTR ERV1 -4718 2995 1 2884 78 103 7 chr18 36569033 36569442 -50108106 - LTR7 LTR ERV1 -2 448 1 573 242 61 40 chr18 36569738 36569936 -50107612 - MLT1L LTR MaLR -242 373 172 831 146 7 28 chr18 36569938 36570082 -50107466 - FLAM_C SINE Alu -2 141 1 230 175 0 0 chr18 36570084 36570124 -50107424 - MLT1L LTR MaLR -434 181 142 22 0 0 0 chr18 36570192 36570214 -50107334 + AT_rich Low_complexity Low_complexity 1 22 0 184 279 0 0 chr18 36570814 36570857 -50106691 + L2 LINE L2 3179 3221 -92 5033 155 46 1 chr18 36570898 36571819 -50105729 - L1MB4 LINE L1 0 6180 5221 355 250 40 0 chr18 36571821 36571897 -50105651 - L2 LINE L2 -9 3263 3185 22 35 0 0 chr18 36572908 36572937 -50104611 + AT_rich Low_complexity Low_complexity 1 29 0 255 351 117 23 chr18 36573032 36573373 -50104175 - L2 LINE L2 -235 3037 2652 245 316 104 54 chr18 36573467 36573783 -50103765 - L2 LINE L2 -1630 1684 1353 477 47 0 0 chr18 36576121 36576185 -50101363 + (TTTA)n Simple_repeat Simple_repeat 2 65 0 1423 136 0 5 chr18 36576214 36576420 -50101128 - AluSx SINE Alu -107 205 1 2892 0 0 3 chr18 36578172 36578482 -50099066 - AluYa5 SINE Alu -2 309 1 246 313 55 16 chr18 36578839 36578967 -50098581 + MER110 LTR ERV1 306 438 -53 2670 149 33 19 chr18 36579058 36579480 -50098068 - MSTC LTR MaLR 0 428 1 332 176 95 0 chr18 36580295 36580369 -50097179 + L2 LINE L2 3012 3092 -221 2253 115 0 0 chr18 36582162 36582466 -50095082 - AluSx SINE Alu -8 304 1 835 110 7 97 chr18 36582827 36582972 -50094576 + FLAM_C SINE Alu 2 133 0 374 317 59 48 chr18 36583039 36583310 -50094238 - L1ME LINE L1 -340 5781 5508 2248 115 0 0 chr18 36583403 36583715 -50093833 - AluSx SINE Alu 0 312 1 480 263 156 27 chr18 36583966 36584152 -50093396 - MIR SINE MIR -11 251 42 22 35 0 0 chr18 36584630 36584659 -50092889 + GC_rich Low_complexity Low_complexity 1 29 0 1699 158 7 3 chr18 36585523 36585827 -50091721 + AluJb SINE Alu 1 305 0 21 0 0 0 chr18 36586567 36586588 -50090960 + AT_rich Low_complexity Low_complexity 1 21 0 260 330 97 19 chr18 36586634 36586737 -50090811 - L2 LINE L2 -25 3247 3137 305 314 148 55 chr18 36586914 36587239 -50090309 - L2 LINE L2 -435 2879 2525 1899 165 0 7 chr18 36587772 36588063 -50089485 + AluJb SINE Alu 7 295 -17 1378 126 109 4 chr18 36588074 36588313 -50089235 + L1PA15 LINE L1 5902 6165 0 4013 130 32 3 chr18 36588442 36589059 -50088489 - LTR24C LTR ERV1 0 635 1 2520 97 22 40 chr18 36589162 36589533 -50088015 - THE1B LTR MaLR 0 364 1 292 246 212 10 chr18 36589693 36589846 -50087702 + MIR SINE MIR 30 208 -54 208 103 0 0 chr18 36589840 36589869 -50087679 + MER5B DNA MER1_type 130 158 -20 * 1806 203 104 56 chr18 36589871 36590353 -50087195 - MLT1D LTR MaLR 0 505 1 1106 174 20 0 chr18 36590474 36590670 -50086878 - MER3 DNA MER1_type -9 200 1 851 193 0 31 chr18 36590864 36591025 -50086523 + AluJo SINE Alu 48 203 -109 2200 103 0 20 chr18 36592486 36592788 -50084760 + AluSx SINE Alu 1 296 -16 822 184 63 128 chr18 36593065 36593483 -50084065 - MLT1B LTR MaLR -2 503 6 242 188 175 12 chr18 36593490 36593570 -50083978 + LTR41 LTR ERVL 3 95 -678 299 308 25 33 chr18 36593958 36594078 -50083470 - MIR3 SINE MIR -53 155 37 404 204 21 11 chr18 36594333 36594426 -50083122 + LTR41 LTR ERVL 93 186 -587 579 335 0 0 chr18 36594482 36594649 -50082899 + LTR41 LTR ERVL 376 542 -231 3542 289 34 26 chr18 36594656 36596045 -50081503 + ERVL LTR ERVL 4017 5425 -152 8683 107 34 6 chr18 36596428 36597684 -50079864 + HSMAR2 DNA Mariner 9 1299 -3 2601 148 19 5 chr18 36598325 36598756 -50078792 + L1MB3 LINE L1 5572 6008 -175 1079 266 20 56 chr18 36598786 36599177 -50078371 - MLT1G LTR MaLR -195 395 19 1050 99 26 0 chr18 36599398 36599549 -50077999 - AluSg/x SINE Alu -17 293 139 1533 165 77 26 chr18 36599650 36599989 -50077559 + MLT1D LTR MaLR 150 505 0 5273 184 26 16 chr18 36599989 36601865 -50075683 - L1MB7 LINE L1 -37 6147 4253 1948 110 0 4 chr18 36601869 36602132 -50075416 - AluSq SINE Alu -2 311 50 422 40 0 0 chr18 36602134 36602184 -50075364 + AluY SINE Alu 10 59 -259 1086 219 5 5 chr18 36602198 36602417 -50075131 - AluJb SINE Alu -10 302 84 1381 192 20 118 chr18 36602417 36602643 -50074905 - L1MB7 LINE L1 -1904 4242 4082 1607 181 14 3 chr18 36602643 36602931 -50074617 - AluJb SINE Alu -9 303 13 1381 192 20 118 chr18 36602931 36603163 -50074385 - L1MB7 LINE L1 -2064 4082 3829 339 318 180 9 chr18 36603185 36603418 -50074130 - L1MEd LINE L1 -5286 833 561 1220 189 114 14 chr18 36603608 36604036 -50073512 + L1MC/D LINE L1 4937 5345 -801 1023 108 7 0 chr18 36604036 36604175 -50073373 + AluSq/x SINE Alu 2 141 -172 2131 100 4 0 chr18 36604175 36604487 -50073061 + AluSx SINE Alu 1 313 0 216 333 33 39 chr18 36605718 36605871 -50071677 - L2 LINE L2 -1372 1942 1791 238 227 0 0 chr18 36606347 36606391 -50071157 + MLT1L LTR MaLR 5 48 -567 408 286 63 61 chr18 36606437 36606694 -50070854 + MLT1L LTR MaLR 106 433 -182 2255 174 59 70 chr18 36606695 36607206 -50070342 + MLT1D LTR MaLR 1 505 0 244 191 63 16 chr18 36607206 36607269 -50070279 + MLT1J LTR MaLR 88 153 -358 393 216 27 68 chr18 36607395 36607543 -50070005 + MLT1J LTR MaLR 325 466 -45 920 192 7 162 chr18 36607604 36608037 -50069511 + L1M4 LINE L1 2581 2946 -3200 1043 93 46 0 chr18 36608051 36608202 -50069346 + L1MA8 LINE L1 6128 6285 -6 24 0 0 0 chr18 36608203 36608227 -50069321 + AT_rich Low_complexity Low_complexity 1 24 0 230 266 112 29 chr18 36608261 36608406 -50069142 + L1M4 LINE L1 2933 3107 -3039 2652 48 0 0 chr18 36608406 36608717 -50068831 + AluY SINE Alu 1 311 0 230 266 112 29 chr18 36608717 36608812 -50068736 + L1M4 LINE L1 3107 3193 -2953 206 155 0 99 chr18 36608826 36608897 -50068651 + (TAATG)n Simple_repeat Simple_repeat 2 65 0 23 33 0 0 chr18 36609085 36609115 -50068433 + AT_rich Low_complexity Low_complexity 1 30 0 912 318 56 6 chr18 36609356 36609677 -50067871 - LTR16A LTR ERVL -7 443 107 242 234 0 0 chr18 36609887 36609934 -50067614 + MER94 DNA DNA 72 118 -16 1941 240 124 61 chr18 36609968 36610880 -50066668 + L1M4 LINE L1 3272 4263 -1883 2182 106 20 3 chr18 36610880 36611173 -50066375 + AluSq SINE Alu 1 298 -15 1941 240 124 61 chr18 36611173 36611330 -50066218 + L1M4 LINE L1 4263 4409 -1737 7896 36 0 0 chr18 36611370 36612317 -50065231 - L1PA5 LINE L1 -1 6153 5203 5064 157 33 31 chr18 36612363 36613878 -50063670 + L1MB2 LINE L1 4655 6171 0 1282 254 38 86 chr18 36613929 36614234 -50063314 + L1M4 LINE L1 4462 4780 -1366 1732 165 36 16 chr18 36614234 36614537 -50063011 + AluJo SINE Alu 1 309 -3 1282 254 38 86 chr18 36614537 36614988 -50062560 + L1M4 LINE L1 4780 5182 -964 601 236 60 66 chr18 36614997 36615332 -50062216 + HAL1 LINE L1 1818 2150 -357 476 302 0 0 chr18 36615708 36615837 -50061711 + MIR SINE MIR 67 195 -67 38 81 0 0 chr18 36615857 36615944 -50061604 + AT_rich Low_complexity Low_complexity 1 87 0 273 286 31 10 chr18 36616449 36616547 -50061001 + LTR33A LTR ERVL 421 520 -3 207 0 0 0 chr18 36618644 36618667 -50058881 + (TC)n Simple_repeat Simple_repeat 1 23 0 * 360 0 0 0 chr18 36618666 36618706 -50058842 + (CA)n Simple_repeat Simple_repeat 1 40 0 188 307 125 0 chr18 36619216 36619304 -50058244 - L2 LINE L2 -223 3049 2951 464 0 18 0 chr18 36620395 36620451 -50057097 + (GA)n Simple_repeat Simple_repeat 2 58 0 202 197 70 0 chr18 36620910 36620981 -50056567 + (TTAAA)n Simple_repeat Simple_repeat 3 78 0 859 208 87 43 chr18 36620995 36621226 -50056322 + L1MEc LINE L1 35 275 -6121 331 151 0 0 chr18 36621221 36621274 -50056274 + L1MEc LINE L1 2314 2366 -4030 * 1175 176 46 9 chr18 36621274 36621490 -50056058 + L1MB5 LINE L1 5951 6174 0 1801 139 51 17 chr18 36621507 36621801 -50055747 + AluSx SINE Alu 1 304 -8 419 273 138 23 chr18 36621959 36622325 -50055223 + L1MDb LINE L1 1122 1532 -4864 204 67 0 0 chr18 36622366 36622396 -50055152 + (A)n Simple_repeat Simple_repeat 1 30 0 660 188 0 38 chr18 36623664 36623797 -50053751 - AluJb SINE Alu 0 312 185 320 229 56 100 chr18 36623800 36623907 -50053641 - L1M4 LINE L1 -1361 4785 4692 1933 138 0 20 chr18 36623907 36624204 -50053344 + AluJo SINE Alu 1 291 -21 320 229 56 100 chr18 36624204 36624327 -50053221 - L1M4 LINE L1 -1454 4692 4565 3685 227 24 46 chr18 36624405 36625596 -50051952 - L1ME1 LINE L1 -5 6230 5071 873 245 97 0 chr18 36625597 36625813 -50051735 - MLT1E2 LTR MaLR -2 652 416 283 217 0 0 chr18 36625837 36625897 -50051651 - L1ME LINE L1 -289 5877 5818 1388 205 98 37 chr18 36625959 36626335 -50051213 - MLT1E2 LTR MaLR -227 399 1 1793 148 82 55 chr18 36626346 36626711 -50050837 + THE1C LTR MaLR 1 375 0 4679 215 124 57 chr18 36626711 36626816 -50050732 - L1ME1 LINE L1 -1145 5070 4973 1886 204 28 6 chr18 36626816 36627173 -50050375 + MLT1A1 LTR MaLR 1 365 0 4679 215 124 57 chr18 36627173 36627971 -50049577 - L1ME1 LINE L1 -1242 4973 4230 1488 207 14 10 chr18 36627971 36628266 -50049282 + AluSq SINE Alu 1 296 -17 4679 215 124 57 chr18 36628266 36629174 -50048374 - L1ME1 LINE L1 -1985 4230 3136 963 117 156 0 chr18 36629179 36629333 -50048215 + MSTA LTR MaLR 1 178 -250 5042 164 27 13 chr18 36629333 36630176 -50047372 - L1M2a LINE L1 -5478 1690 836 3240 175 39 0 chr18 36630169 36630713 -50046835 - L1M2a LINE L1 -6591 577 13 * 3250 244 73 27 chr18 36630802 36631134 -50046414 - L1ME1 LINE L1 -5285 1111 796 2405 88 0 0 chr18 36631134 36631431 -50046117 - AluSg1 SINE Alu -12 297 1 3250 244 73 27 chr18 36631431 36632068 -50045480 - L1ME1 LINE L1 -5600 796 88 195 42 0 0 chr18 36632068 36632092 -50045456 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 3250 244 73 27 chr18 36632092 36632167 -50045381 - L1ME1 LINE L1 -6308 88 18 832 220 45 65 chr18 36632223 36632605 -50044943 - HAL1 LINE L1 -1320 1187 814 216 0 0 0 chr18 36632606 36632630 -50044918 + (TA)n Simple_repeat Simple_repeat 2 25 0 1893 147 0 17 chr18 36632630 36632923 -50044625 - AluSq SINE Alu -25 288 1 231 178 22 0 chr18 36632927 36632972 -50044576 - HAL1 LINE L1 -1671 836 791 302 306 12 0 chr18 36633167 36633252 -50044296 - HAL1 LINE L1 -841 1666 1581 884 140 0 15 chr18 36633255 36633391 -50044157 + L1PA15 LINE L1 5904 6037 -128 723 115 0 13 chr18 36633391 36633640 -50043908 + AluSp SINE Alu 1 297 -16 906 130 0 0 chr18 36633640 36633778 -50043770 + L1PA15 LINE L1 6026 6163 -2 723 115 0 13 chr18 36633778 36633789 -50043759 + AluSp SINE Alu 297 307 -6 2059 228 140 7 chr18 36634769 36635312 -50042236 + MLT1E2 LTR MaLR 3 617 -9 295 203 145 0 chr18 36635469 36635538 -50042010 - HsTC2 DNA Tc2 -1813 85 7 1655 161 11 45 chr18 36635543 36635829 -50041719 + AluJo SINE Alu 1 276 -36 2370 107 68 8 chr18 36636253 36636607 -50040941 - THE1C LTR MaLR 0 375 1 764 218 48 52 chr18 36636661 36636913 -50040635 - L1MC5 LINE L1 -51 7910 7660 2182 197 20 54 chr18 36636987 36637095 -50040453 - MLT1D LTR MaLR 0 505 395 2246 106 10 0 chr18 36637095 36637396 -50040152 - AluSx SINE Alu -8 304 1 2182 197 20 54 chr18 36637396 36637789 -50039759 - MLT1D LTR MaLR -110 395 21 288 110 19 10 chr18 36639096 36639149 -50038399 - MLT1D LTR MaLR -215 290 249 38 51 0 0 chr18 36639166 36639225 -50038323 + AT_rich Low_complexity Low_complexity 1 59 0 312 192 0 0 chr18 36640825 36640877 -50036671 - L1ME LINE L1 -459 6518 6467 * 4887 229 22 23 chr18 36640870 36642176 -50035372 - L1ME LINE L1 -757 6200 4896 2542 248 98 43 chr18 36642171 36643902 -50033646 - L1ME LINE L1 -4004 3134 1188 * 1901 103 3 97 chr18 36643926 36644257 -50033291 + AluSq SINE Alu 1 300 -13 372 248 81 41 chr18 36644752 36644941 -50032607 - L1ME LINE L1 -5935 1012 42 1656 192 69 71 chr18 36646460 36646630 -50030918 + MLT1C LTR MaLR 4 173 -294 2460 86 0 6 chr18 36646630 36646945 -50030603 + AluSq SINE Alu 1 313 0 1656 192 69 71 chr18 36646945 36647237 -50030311 + MLT1C LTR MaLR 173 465 -2 189 293 242 15 chr18 36647687 36647885 -50029663 + L2 LINE L2 2928 3170 -143 501 287 138 11 chr18 36647916 36648288 -50029260 + L2 LINE L2 2640 3063 -250 3510 190 25 4 chr18 36648288 36648928 -50028620 - L1MD1 LINE L1 0 6242 5586 1622 195 14 3 chr18 36648928 36649220 -50028328 - AluJo SINE Alu -17 295 1 3510 190 25 4 chr18 36649220 36649258 -50028290 - L1MD1 LINE L1 -656 5586 5550 200 338 0 13 chr18 36650457 36650534 -50027014 + CT-rich Low_complexity Low_complexity 1 76 0 1003 175 11 16 chr18 36651192 36651375 -50026173 - MLT1A2 LTR MaLR -4 370 189 222 239 30 0 chr18 36651402 36651469 -50026079 + GA-rich Low_complexity Low_complexity 2 70 0 695 169 95 7 chr18 36651474 36651622 -50025926 - MLT1A2 LTR MaLR -213 161 1 351 0 0 0 chr18 36652393 36652432 -50025116 + (TG)n Simple_repeat Simple_repeat 1 39 0 1995 133 33 13 chr18 36652998 36653298 -50024250 + AluSx SINE Alu 1 306 -6 242 313 78 16 chr18 36653471 36653599 -50023949 - L2 LINE L2 -1 3271 3136 202 139 28 0 chr18 36653664 36653700 -50023848 + A-rich Low_complexity Low_complexity 2 38 0 1932 143 0 0 chr18 36653711 36653990 -50023558 + AluSx SINE Alu 2 280 -32 2037 140 213 93 chr18 36655243 36655836 -50021712 + MER4A LTR ERV1 1 664 0 869 264 24 75 chr18 36656006 36656066 -50021482 - MLT1I LTR MaLR -22 387 326 2049 147 3 0 chr18 36656066 36656373 -50021175 - AluSx SINE Alu -2 310 3 869 264 24 75 chr18 36656373 36656513 -50021035 - MLT1I LTR MaLR -83 326 180 2196 199 15 91 chr18 36656513 36656648 -50020900 - MLT1D LTR MaLR 0 505 361 1849 160 4 0 chr18 36656648 36656966 -50020582 + AluSx SINE Alu 1 319 0 2196 199 15 91 chr18 36656966 36657376 -50020172 - MLT1D LTR MaLR -144 361 1 869 264 24 75 chr18 36657376 36657549 -50019999 - MLT1I LTR MaLR -229 180 32 1038 259 51 22 chr18 36657836 36658245 -50019303 + L1MEc LINE L1 1330 1750 -4646 229 303 56 31 chr18 36658242 36658404 -50019144 + L1MEc LINE L1 3313 3478 -2737 * 827 199 0 0 chr18 36658411 36658547 -50019001 - FLAM_C SINE Alu -4 139 4 3505 138 9 65 chr18 36658548 36659199 -50018349 + MER73 LTR ERVL 30 644 0 7281 197 25 39 chr18 36659218 36659817 -50017731 + L1MB5 LINE L1 3494 4100 -2135 1838 146 25 0 chr18 36659817 36660112 -50017436 + AluJb SINE Alu 1 302 0 7281 197 25 39 chr18 36660112 36660266 -50017282 + L1MB5 LINE L1 4100 4255 -1980 2263 94 7 0 chr18 36660266 36660553 -50016995 + AluSc SINE Alu 1 289 -20 1696 166 0 91 chr18 36660559 36660890 -50016658 + AluJo SINE Alu 2 302 0 7281 197 25 39 chr18 36660890 36662929 -50014619 + L1MB5 LINE L1 4260 6235 0 1101 223 13 4 chr18 36662999 36663237 -50014311 + L1M4 LINE L1 4381 4620 -1526 1947 142 6 13 chr18 36664007 36664318 -50013230 + AluJb SINE Alu 1 309 -3 2827 166 30 2 chr18 36665070 36665571 -50011977 - L1MC3 LINE L1 -2 7783 7269 2099 151 0 3 chr18 36666954 36667265 -50010283 + AluSx SINE Alu 1 310 -2 1277 159 38 124 chr18 36667682 36668021 -50009527 + AluJo SINE Alu 3 312 0 2074 180 44 25 chr18 36668384 36668790 -50008758 - MLT2D LTR ERVL 0 414 1 492 143 30 30 chr18 36669952 36670085 -50007463 + CT-rich Low_complexity Low_complexity 4 136 0 2060 109 4 4 chr18 36670086 36670360 -50007188 - AluSp SINE Alu -39 274 1 544 257 47 23 chr18 36671540 36671711 -50005837 - MIR SINE MIR -70 192 18 1160 218 62 24 chr18 36672411 36672783 -50004765 - L1MC5 LINE L1 -36 7925 7540 426 229 33 87 chr18 36673726 36673909 -50003639 + MER5B DNA MER1_type 6 178 0 423 262 43 7 chr18 36674165 36674306 -50003242 - MER5A DNA MER1_type 0 189 44 211 213 33 0 chr18 36674421 36674482 -50003066 - MER5A DNA MER1_type -63 126 64 387 239 18 35 chr18 36674772 36674885 -50002663 + MER5A DNA MER1_type 61 171 -18 842 213 6 0 chr18 36675898 36676058 -50001490 + AluJb SINE Alu 137 297 -15 264 204 0 0 chr18 36676457 36676506 -50001042 + MLT1L LTR MaLR 196 244 -371 529 195 78 65 chr18 36676509 36676805 -50000743 - L1 LINE L1 -2727 3419 3137 * 1642 251 54 9 chr18 36676794 36677257 -50000291 - L1ME1 LINE L1 -1 6165 5682 1995 85 9 97 chr18 36677258 36677587 -49999961 + AluSq SINE Alu 1 300 -13 365 248 81 41 chr18 36678082 36678271 -49999277 - L1ME LINE L1 -5935 1012 42 1525 192 69 71 chr18 36679790 36679960 -49997588 + MLT1C LTR MaLR 4 173 -294 2479 86 0 6 chr18 36679960 36680275 -49997273 + AluSq SINE Alu 1 313 0 1525 192 69 71 chr18 36680275 36680567 -49996981 + MLT1C LTR MaLR 173 465 -2 432 275 106 6 chr18 36681260 36681620 -49995928 + L2 LINE L2 2650 3063 -250 3319 189 25 4 chr18 36681620 36682260 -49995288 - L1MD1 LINE L1 0 6242 5586 1657 192 14 3 chr18 36682260 36682552 -49994996 - AluJo SINE Alu -17 295 1 3319 189 25 4 chr18 36682552 36682590 -49994958 - L1MD1 LINE L1 -656 5586 5550 200 338 0 13 chr18 36683791 36683868 -49993680 + CT-rich Low_complexity Low_complexity 1 76 0 1004 175 11 16 chr18 36684526 36684709 -49992839 - MLT1A2 LTR MaLR -4 370 189 278 156 16 0 chr18 36684738 36684802 -49992746 + GA-rich Low_complexity Low_complexity 2 66 0 694 169 95 7 chr18 36684807 36684955 -49992593 - MLT1A2 LTR MaLR -213 161 1 369 0 0 0 chr18 36685726 36685767 -49991781 + (TG)n Simple_repeat Simple_repeat 1 41 0 2022 137 33 13 chr18 36686331 36686637 -49990911 + AluSx SINE Alu 1 312 0 256 285 85 0 chr18 36686803 36686933 -49990615 - L2 LINE L2 -1 3312 3172 202 139 28 0 chr18 36686996 36687032 -49990516 + A-rich Low_complexity Low_complexity 2 38 0 1933 149 0 0 chr18 36687043 36687324 -49990224 + AluSx SINE Alu 2 282 -30 189 273 91 24 chr18 36687349 36687514 -49990034 - L2 LINE L2 -213 3100 2925 200 277 87 38 chr18 36689524 36689708 -49987840 + L2 LINE L2 2679 2871 -443 199 345 50 17 chr18 36689980 36690099 -49987449 + L2 LINE L2 3150 3272 0 349 292 89 66 chr18 36691766 36691853 -49985695 - L1M4 LINE L1 -424 5754 5670 7513 37 17 0 chr18 36691853 36692839 -49984709 - L1PA4 LINE L1 0 6155 5169 349 292 89 66 chr18 36692839 36693200 -49984348 - L1M4 LINE L1 -508 5670 5264 551 324 20 16 chr18 36693445 36693689 -49983859 + L1MEc LINE L1 35 279 -6117 648 247 67 21 chr18 36694161 36694400 -49983148 + L1MEc LINE L1 656 905 -5300 621 115 0 0 chr18 36694568 36694664 -49982884 + (TA)n Simple_repeat Simple_repeat 1 96 0 1959 254 58 52 chr18 36694678 36694824 -49982724 + L1MCa LINE L1 850 994 -5613 1714 173 16 23 chr18 36694824 36695131 -49982417 + AluJo SINE Alu 1 305 -7 1959 254 58 52 chr18 36695131 36695804 -49981744 + L1MCa LINE L1 994 1662 -4945 2035 143 0 16 chr18 36695804 36696119 -49981429 + AluJb SINE Alu 1 310 -2 1959 254 58 52 chr18 36696119 36696591 -49980957 + L1MCa LINE L1 1662 2363 -4244 1141 263 116 0 chr18 36696585 36696966 -49980582 + L1MD3 LINE L1 7571 7995 0 * 503 244 83 0 chr18 36696959 36697139 -49980409 + L1MCa LINE L1 2343 2537 -4070 * 800 247 0 0 chr18 36697139 36697305 -49980243 + FRAM SINE Alu 2 167 -9 643 193 47 61 chr18 36697310 36697380 -49980168 + L1MCa LINE L1 2487 2556 -3870 2221 117 0 0 chr18 36697380 36697670 -49979878 + AluSx SINE Alu 1 290 -22 643 193 47 61 chr18 36697670 36697811 -49979737 + L1MCa LINE L1 2556 2695 -3731 306 0 0 0 chr18 36697991 36698025 -49979523 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 444 313 119 5 chr18 36701221 36701422 -49976126 - MIR SINE MIR -29 233 10 1593 189 85 59 chr18 36701768 36702020 -49975528 - L1ME2 LINE L1 0 6164 5920 2199 107 7 17 chr18 36702020 36702319 -49975229 + AluSx SINE Alu 1 296 -16 1593 189 85 59 chr18 36702319 36702604 -49974944 - L1ME2 LINE L1 -244 5920 5558 240 196 20 0 chr18 36703152 36703203 -49974345 + CT-rich Low_complexity Low_complexity 1 52 0 196 296 51 0 chr18 36703273 36703371 -49974177 + L2 LINE L2 2652 2754 -560 191 241 52 17 chr18 36703966 36704024 -49973524 + L2 LINE L2 3192 3251 -21 1933 207 112 68 chr18 36704165 36704866 -49972682 + L1MC4a LINE L1 5982 6724 -1084 1756 185 29 20 chr18 36704866 36705207 -49972341 - MER2 DNA MER2_type 0 344 1 1933 207 112 68 chr18 36705207 36705308 -49972240 + L1MC4a LINE L1 6724 6819 -989 768 186 67 62 chr18 36705312 36705645 -49971903 - MLT1B LTR MaLR 0 390 1 395 228 22 0 chr18 36705645 36705737 -49971811 + L1MC4 LINE L1 6908 7001 -1041 4870 152 38 26 chr18 36705752 36706261 -49971287 + L1MB7 LINE L1 5259 5784 -400 1579 193 43 13 chr18 36706261 36706562 -49970986 + AluJo SINE Alu 1 310 -2 4870 152 38 26 chr18 36706562 36706959 -49970589 + L1MB7 LINE L1 5784 6175 -9 337 153 0 12 chr18 36706981 36707066 -49970482 + L1MC4a LINE L1 6916 6999 -809 952 160 39 0 chr18 36707074 36707230 -49970318 + FAM SINE Alu 1 48 -1 2720 184 101 27 chr18 36707240 36707720 -49969828 + L1MC4 LINE L1 7075 7518 -524 2230 119 33 33 chr18 36707720 36708080 -49969468 - THE1B LTR MaLR 0 364 5 12129 87 1 4 chr18 36708082 36709666 -49967882 - THE1B-int LTR MaLR 0 1580 2 2241 127 33 33 chr18 36709669 36710031 -49967517 - THE1B LTR MaLR -2 362 1 2720 184 101 27 chr18 36710031 36710206 -49967342 + L1MC4 LINE L1 7519 7786 -256 369 148 0 0 chr18 36710351 36710412 -49967136 + L1MC4 LINE L1 7791 7851 -191 1936 155 3 16 chr18 36711166 36711482 -49966066 - AluJb SINE Alu 0 312 1 232 212 65 126 chr18 36712644 36712875 -49964673 + L1ME LINE L1 5699 5915 -206 835 239 84 9 chr18 36713451 36713677 -49963871 + MIR SINE MIR 20 262 0 2416 196 56 60 chr18 36714646 36715268 -49962280 + MLT1E3 LTR MaLR 1 620 -4 1533 174 57 0 chr18 36715570 36715834 -49961714 + AluJb SINE Alu 3 281 -31 1836 201 160 62 chr18 36716147 36716960 -49960588 + L1ME3 LINE L1 5202 6095 -67 216 0 0 0 chr18 36716976 36717000 -49960548 + (TTTTG)n Simple_repeat Simple_repeat 3 26 0 1109 168 155 0 chr18 36717002 36717234 -49960314 - AluJo SINE Alu -32 280 13 185 246 72 14 chr18 36717577 36717646 -49959902 - MIR SINE MIR -32 230 158 2595 50 3 0 chr18 36718811 36719113 -49958435 - AluSp SINE Alu -10 303 1 252 274 62 53 chr18 36719302 36719510 -49958038 + L2 LINE L2 3098 3307 -6 2083 102 25 0 chr18 36720165 36720469 -49957079 + AluSc SINE Alu 1 311 0 186 266 101 0 chr18 36720875 36720954 -49956594 + L2 LINE L2 1984 2070 -1244 267 143 20 0 chr18 36721027 36721076 -49956472 - MER5B DNA MER1_type -125 53 4 462 298 171 59 chr18 36721090 36721263 -49956285 + L2 LINE L2 2108 2260 -1054 1824 122 90 11 chr18 36721263 36721541 -49956007 + AluSx SINE Alu 1 300 -12 462 298 171 59 chr18 36721541 36722149 -49955399 + L2 LINE L2 2260 2977 -337 1299 240 58 3 chr18 36723684 36723996 -49953552 - MER115 DNA AcHobo -1 692 364 474 275 28 34 chr18 36724036 36724214 -49953334 - MER115 DNA AcHobo -444 249 73 211 277 40 20 chr18 36724588 36724689 -49952859 + MER91C DNA MER1_type 19 121 -19 225 151 38 19 chr18 36726553 36726606 -49950942 + MIR SINE MIR 91 144 -118 1615 228 154 15 chr18 36726649 36727246 -49950302 - L1ME3A LINE L1 -5 6165 5480 240 304 114 54 chr18 36727825 36728009 -49949539 - LTR67 LTR ERVL -332 225 31 280 305 46 15 chr18 36729394 36729525 -49948023 - MIR SINE MIR -50 212 78 1744 231 77 6 chr18 36729648 36730210 -49947338 - L1ME3A LINE L1 -1976 4170 3529 589 157 0 37 chr18 36731546 36731654 -49945894 - FLAM_C SINE Alu -3 140 37 391 270 86 7 chr18 36732394 36732546 -49945002 + LTR33 LTR ERVL 47 210 -311 376 200 26 52 chr18 36732541 36732656 -49944892 + LTR33 LTR ERVL 402 513 -8 * 325 304 18 9 chr18 36734480 36734592 -49942956 + (CA)n Simple_repeat Simple_repeat 2 114 0 229 151 14 55 chr18 36734613 36734686 -49942862 + (CATATA)n Simple_repeat Simple_repeat 5 74 0 312 48 0 0 chr18 36735809 36735851 -49941697 + (TG)n Simple_repeat Simple_repeat 2 43 0 704 230 106 0 chr18 36737800 36737961 -49939587 - MER45A DNA AcHobo 0 178 1 1857 213 36 70 chr18 36738421 36738918 -49938630 + MLT2B1 LTR ERVL 1 480 -40 279 241 0 0 chr18 36738972 36739030 -49938518 + Ricksha DNA DNA 847 904 -2342 1736 169 30 10 chr18 36739251 36739547 -49938001 + AluJo SINE Alu 11 312 0 1782 230 79 9 chr18 36739570 36740027 -49937521 - MER90 LTR ERV1 -4 610 122 2341 94 10 7 chr18 36740256 36740565 -49936983 - AluSg SINE Alu 0 310 1 298 270 0 11 chr18 36740603 36740692 -49936856 - MIR SINE MIR -26 236 149 1905 144 10 13 chr18 36740935 36741241 -49936307 + AluJb SINE Alu 1 305 -7 318 255 144 39 chr18 36741610 36741763 -49935785 + MLT1H LTR MaLR 1 169 -380 330 245 47 28 chr18 36741860 36741966 -49935582 + MLT1H LTR MaLR 442 549 0 1707 93 0 74 chr18 36742143 36742400 -49935148 + AluSg/x SINE Alu 65 302 -8 380 284 63 8 chr18 36742540 36742667 -49934881 - L2 LINE L2 -1 3312 3179 810 239 66 14 chr18 36743109 36743322 -49934226 - MIR SINE MIR 0 262 39 209 29 0 57 chr18 36743558 36743593 -49933955 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2127 99 0 88 chr18 36743607 36743949 -49933599 - AluSx SINE Alu 0 312 1 315 241 0 74 chr18 36744960 36745068 -49932480 + MIR SINE MIR 25 124 -84 1767 152 0 35 chr18 36745756 36746045 -49931503 + AluJo SINE Alu 16 294 -18 1836 143 22 51 chr18 36746517 36746831 -49930717 + AluSx SINE Alu 1 305 -7 858 64 0 0 chr18 36747105 36747214 -49930334 + AluSg/x SINE Alu 202 310 -2 1359 165 96 0 chr18 36747217 36747466 -49930082 - MSTB1 LTR MaLR -159 273 1 5022 235 77 43 chr18 36748067 36748613 -49928935 + L1MD2 LINE L1 783 1309 -5097 2327 113 0 0 chr18 36748613 36748922 -49928626 + AluSx SINE Alu 1 309 -3 5022 235 77 43 chr18 36748922 36749099 -49928449 + L1MD2 LINE L1 1309 1479 -4927 2235 151 83 8 chr18 36749099 36749497 -49928051 - MSTA LTR MaLR 0 428 1 5022 235 77 43 chr18 36749497 36751992 -49925556 + L1MD2 LINE L1 1479 4069 -2337 1684 92 0 4 chr18 36751992 36752220 -49925328 + AluY SINE Alu 75 301 -10 5022 235 77 43 chr18 36752220 36752436 -49925112 + L1MD2 LINE L1 4069 4276 -2130 2066 130 3 3 chr18 36752459 36752759 -49924789 + AluSc SINE Alu 1 300 -9 838 61 0 0 chr18 36752759 36752857 -49924691 + AluSq SINE Alu 134 231 -82 1833 199 70 32 chr18 36752875 36753318 -49924230 + LTR2B LTR ERV1 31 490 0 3685 233 52 45 chr18 36753336 36754455 -49923093 + L1MD2 LINE L1 4283 5423 -1196 815 137 7 7 chr18 36754455 36754594 -49922954 + L1MB8 LINE L1 6027 6165 -13 3685 233 52 45 chr18 36754594 36755325 -49922223 + L1MD2 LINE L1 5423 6148 -471 840 146 15 0 chr18 36755329 36755507 -49922041 + FLAM_C SINE Alu 1 180 0 326 221 26 0 chr18 36755508 36755585 -49921963 + L1MC4 LINE L1 5878 5956 -2086 2277 217 17 89 chr18 36755587 36756219 -49921329 - MLT1E LTR MaLR 0 593 7 480 257 145 11 chr18 36756229 36756408 -49921140 + L1ME1 LINE L1 5958 6116 -50 287 82 0 49 chr18 36757161 36757222 -49920326 + (T)n Simple_repeat Simple_repeat 1 58 0 2124 97 0 88 chr18 36757237 36757577 -49919971 - AluSx SINE Alu -2 310 1 315 241 0 74 chr18 36758601 36758709 -49918839 + MIR SINE MIR 25 124 -84 1767 152 0 35 chr18 36759397 36759686 -49917862 + AluJo SINE Alu 16 294 -18 1791 144 26 51 chr18 36760158 36760471 -49917077 + AluSx SINE Alu 1 305 -7 814 69 0 0 chr18 36760745 36760847 -49916701 + AluSg/x SINE Alu 200 301 -9 859 132 34 8 chr18 36760922 36761096 -49916452 - MSTB1 LTR MaLR -239 189 1 4466 237 74 43 chr18 36761697 36762244 -49915304 + L1MD2 LINE L1 783 1311 -5095 2302 114 0 0 chr18 36762244 36762550 -49914998 + AluSx SINE Alu 1 306 -6 4466 237 74 43 chr18 36762550 36762727 -49914821 + L1MD2 LINE L1 1311 1481 -4925 2231 151 83 8 chr18 36762727 36763125 -49914423 - MSTA LTR MaLR 0 428 1 4466 237 74 43 chr18 36763125 36765621 -49911927 + L1MD2 LINE L1 1481 4065 -2341 1760 84 0 4 chr18 36765621 36765858 -49911690 + AluY SINE Alu 75 310 -1 4466 237 74 43 chr18 36765858 36766077 -49911471 + L1MD2 LINE L1 4065 4276 -2130 2078 127 3 3 chr18 36766100 36766400 -49911148 + AluSc SINE Alu 1 300 -9 817 61 0 0 chr18 36766400 36766498 -49911050 + AluSq SINE Alu 134 231 -82 1610 203 70 32 chr18 36766516 36766959 -49910589 + LTR2B LTR ERV1 31 490 0 3275 233 52 45 chr18 36766977 36768096 -49909452 + L1MD2 LINE L1 4283 5423 -1196 752 144 7 7 chr18 36768096 36768235 -49909313 + L1MB8 LINE L1 6027 6165 -13 3275 233 52 45 chr18 36768235 36768966 -49908582 + L1MD2 LINE L1 5423 6148 -471 848 145 15 0 chr18 36768970 36769152 -49908396 + FLAM_C SINE Alu 1 184 0 278 234 26 0 chr18 36769153 36769230 -49908318 + L1MC5 LINE L1 5878 5956 -2039 2016 211 33 90 chr18 36769232 36769844 -49907704 - MLT1E LTR MaLR 0 593 17 452 251 145 11 chr18 36769864 36770043 -49907505 + L1ME1 LINE L1 5958 6116 -50 239 389 120 0 chr18 36770467 36770634 -49906914 + L2 LINE L2 2718 2904 -410 390 239 96 43 chr18 36770654 36770842 -49906706 - L1ME3A LINE L1 -5 6165 5968 280 329 82 43 chr18 36770870 36771077 -49906471 + L2 LINE L2 2895 3109 -163 1849 234 47 39 chr18 36771178 36771798 -49905750 + L1MC4a LINE L1 5277 5901 -1907 333 0 0 0 chr18 36771975 36772012 -49905536 + (CA)n Simple_repeat Simple_repeat 2 38 0 2331 178 34 34 chr18 36772013 36772512 -49905036 - MLT1D LTR MaLR -4 501 3 379 296 128 63 chr18 36772587 36772877 -49904671 + L1MC4a LINE L1 6043 6367 -1441 180 0 0 0 chr18 36772877 36772897 -49904651 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 379 296 128 63 chr18 36772897 36773005 -49904543 + L1MC4a LINE L1 6367 6467 -1341 1782 226 63 32 chr18 36773085 36773737 -49903811 + L1MC5 LINE L1 6559 7236 -725 5502 126 29 49 chr18 36773772 36773908 -49903640 - L1MA9 LINE L1 -2 6310 6173 315 0 0 0 chr18 36773908 36773943 -49903605 + (TG)n Simple_repeat Simple_repeat 2 36 0 5502 126 29 49 chr18 36773943 36774965 -49902583 - L1MA9 LINE L1 -139 6173 5173 627 276 60 67 chr18 36774968 36775384 -49902164 + LTR68 LTR ERV1 1 413 -327 1653 216 43 61 chr18 36775567 36776313 -49901235 + L1MC5 LINE L1 7260 7907 -54 269 252 130 0 chr18 36776872 36777003 -49900545 - L1ME4a LINE L1 -1 6120 5973 1598 133 4 4 chr18 36777096 36777330 -49900218 - AluJb SINE Alu -73 239 6 2313 223 113 20 chr18 36777336 36778171 -49899377 - L1ME4a LINE L1 -213 5949 5051 274 240 132 8 chr18 36778160 36778281 -49899267 - L1ME LINE L1 -283 5838 5703 * 337 356 0 2 chr18 36778353 36778476 -49899072 - MIR SINE MIR -88 120 38 226 207 17 17 chr18 36778519 36778577 -49898971 - L1ME LINE L1 -456 5665 5608 342 206 0 0 chr18 36778714 36778787 -49898761 + (TATATG)n Simple_repeat Simple_repeat 4 76 0 335 313 131 6 chr18 36778799 36778975 -49898573 - MIR SINE MIR -12 250 53 491 276 88 60 chr18 36779034 36779172 -49898376 + LTR33 LTR ERVL 6 139 -382 3005 158 23 2 chr18 36779172 36779686 -49897862 + LTR45 LTR ERV1 1 525 0 491 276 88 60 chr18 36779686 36779946 -49897602 + LTR33 LTR ERVL 139 415 -106 23 0 0 0 chr18 36779946 36779969 -49897579 + AT_rich Low_complexity Low_complexity 1 23 0 308 308 22 32 chr18 36780128 36780313 -49897235 - L1MCc LINE L1 -6226 197 15 745 231 29 55 chr18 36780320 36780691 -49896857 - L1MD3 LINE L1 0 8042 7690 317 23 0 23 chr18 36780746 36780789 -49896759 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 1095 56 14 0 chr18 36780789 36780932 -49896616 - MER107 DNA MER1_type -52 145 1 1275 230 114 26 chr18 36781344 36781811 -49895737 + L1MCc LINE L1 1035 1575 -4970 1807 150 61 3 chr18 36781811 36782104 -49895444 + AluJb SINE Alu 2 311 -1 1275 230 114 26 chr18 36782104 36782197 -49895351 + L1MCc LINE L1 1575 1658 -4887 905 274 40 44 chr18 36782337 36782681 -49894867 + L1MCc LINE L1 2285 2628 -4494 1714 100 0 4 chr18 36782681 36782910 -49894638 + AluSq SINE Alu 82 309 -4 905 274 40 44 chr18 36782910 36783062 -49894486 + L1MCc LINE L1 2628 2779 -4343 1518 194 4 11 chr18 36783100 36783373 -49894175 - AluJo SINE Alu -21 291 21 1087 239 30 6 chr18 36783828 36784374 -49893174 + L1MCc LINE L1 2775 3415 -3526 412 266 26 49 chr18 36784468 36784735 -49892813 - HAL1 LINE L1 -1215 1292 1032 327 302 40 54 chr18 36785235 36785384 -49892164 - HAL1 LINE L1 -1870 637 491 237 219 9 105 chr18 36785419 36785524 -49892024 - MER45A DNA AcHobo -13 165 71 413 122 14 27 chr18 36785698 36785772 -49891776 - AluJo SINE Alu -176 136 64 310 278 135 16 chr18 36785910 36786036 -49891512 - HAL1 LINE L1 -2359 148 8 311 246 126 103 chr18 36786102 36786277 -49891271 + MIR SINE MIR 28 206 -56 1046 167 6 28 chr18 36786719 36786899 -49890649 + FAM SINE Alu 1 48 -1 548 40 27 0 chr18 36787777 36787851 -49889697 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 210 37 0 0 chr18 36788113 36788140 -49889408 + (T)n Simple_repeat Simple_repeat 1 27 0 2498 237 46 43 chr18 36788141 36788883 -49888665 - MER21B LTR ERV1 -99 764 21 2044 135 11 0 chr18 36789496 36789829 -49887719 - AluSq SINE Alu 0 336 1 251 259 0 0 chr18 36789964 36790018 -49887530 - L2 LINE L2 -12 3301 3248 527 212 35 76 chr18 36790322 36790520 -49887028 - L1ME3A LINE L1 -8 6162 5973 2363 204 18 41 chr18 36790612 36790655 -49886893 - L1ME2 LINE L1 -102 6060 6018 1445 191 113 113 chr18 36790655 36791266 -49886282 - LTR36 LTR ERV1 0 611 1 2363 204 18 41 chr18 36791266 36791336 -49886212 - L1ME2 LINE L1 -144 6018 5948 1438 170 3 99 chr18 36791336 36791659 -49885889 - AluJo SINE Alu -10 292 1 2363 204 18 41 chr18 36791659 36792207 -49885341 - L1ME2 LINE L1 -214 5948 5441 1864 131 92 0 chr18 36792207 36792489 -49885059 - AluSx SINE Alu -4 308 1 2363 204 18 41 chr18 36792489 36792601 -49884947 - L1ME2 LINE L1 -721 5441 5328 2282 99 0 3 chr18 36792711 36793005 -49884543 - AluSx SINE Alu -19 293 1 494 209 9 19 chr18 36793205 36793310 -49884238 + MER81 DNA DNA 1 104 -10 323 246 172 37 chr18 36793323 36793457 -49884091 + MLT1J LTR MaLR 108 259 -252 324 232 145 7 chr18 36793470 36793608 -49883940 - MLT1J LTR MaLR 0 511 355 1054 262 154 69 chr18 36793609 36794247 -49883301 + L3 LINE CR1 310 1001 -576 224 230 103 11 chr18 36794300 36794387 -49883161 + L3 LINE CR1 1184 1278 -299 2271 119 0 0 chr18 36794950 36795253 -49882295 + AluSq SINE Alu 1 303 -10 549 188 67 54 chr18 36795264 36795413 -49882135 + L1MB1 LINE L1 6017 6167 -1 1665 183 3 18 chr18 36795498 36795782 -49881766 + AluJb SINE Alu 1 280 -32 272 229 24 0 chr18 36795861 36795944 -49881604 + L1MEd LINE L1 2557 2641 -3488 742 133 8 31 chr18 36796007 36796135 -49881413 + FLAM_C SINE Alu 1 125 -18 346 324 107 58 chr18 36796139 36796751 -49880797 + L1MEc LINE L1 79 733 -5386 2235 88 0 23 chr18 36796751 36797057 -49880491 + AluSc SINE Alu 1 299 -10 346 324 107 58 chr18 36797057 36797164 -49880384 + L1MEc LINE L1 733 833 -5286 1862 209 47 35 chr18 36797297 36797462 -49880086 + L1MEd LINE L1 2569 2731 -3398 2246 108 0 0 chr18 36797462 36797758 -49879790 - AluSx SINE Alu -16 296 1 1862 209 47 35 chr18 36797758 36798215 -49879333 + L1MEd LINE L1 2731 3198 -2931 4597 227 89 34 chr18 36798473 36799689 -49877859 + L1MEd LINE L1 3191 4519 -1610 1654 160 55 4 chr18 36799689 36800007 -49877541 + AluSx SINE Alu 1 332 0 4597 227 89 34 chr18 36800007 36800383 -49877165 + L1MEd LINE L1 4519 4873 -1256 2806 185 60 34 chr18 36800428 36801162 -49876386 + L1MB7 LINE L1 5424 6176 -8 981 229 37 26 chr18 36801197 36801569 -49875979 + L1MEc LINE L1 976 1250 -4869 381 204 21 0 chr18 36801570 36801663 -49875885 + L1MD2 LINE L1 5795 5889 -470 735 232 34 1 chr18 36801681 36801874 -49875674 - MLT1B LTR MaLR -6 380 173 396 0 0 0 chr18 36801882 36801926 -49875622 + (GA)n Simple_repeat Simple_repeat 1 44 0 872 201 68 39 chr18 36802040 36802274 -49875274 + L1MD2 LINE L1 5903 6143 -216 607 225 19 6 chr18 36802275 36802435 -49875113 + L1MD2 LINE L1 6196 6357 -2 26 30 0 0 chr18 36802512 36802545 -49875003 + AT_rich Low_complexity Low_complexity 1 33 0 1580 174 76 4 chr18 36802630 36802906 -49874642 - AluJo SINE Alu -16 296 1 232 350 58 0 chr18 36803204 36803324 -49874224 + L3 LINE CR1 1333 1459 -118 495 73 0 0 chr18 36803456 36803524 -49874024 + (CA)n Simple_repeat Simple_repeat 1 68 0 2214 122 0 3 chr18 36803615 36803919 -49873629 + AluSq SINE Alu 1 303 -10 270 284 0 49 chr18 36804195 36804297 -49873251 + MER5A DNA MER1_type 87 183 -6 22 0 0 0 chr18 36804730 36804752 -49872796 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 36804993 36805014 -49872534 + AT_rich Low_complexity Low_complexity 1 21 0 484 290 122 32 chr18 36805198 36805574 -49871974 + HAL1 LINE L1 1395 1804 -703 532 269 29 59 chr18 36806470 36806790 -49870758 + MLT1I LTR MaLR 98 383 -26 2330 111 0 0 chr18 36808041 36808347 -49869201 - AluSx SINE Alu -6 306 1 2363 110 0 0 chr18 36808685 36808995 -49868553 - AluSx SINE Alu -2 310 1 1389 207 15 126 chr18 36809108 36809278 -49868270 + L1MDa LINE L1 66 253 -6287 2344 115 0 6 chr18 36809278 36809592 -49867956 - AluSx SINE Alu 0 312 1 1389 207 15 126 chr18 36809592 36809961 -49867587 + L1MDa LINE L1 253 545 -5995 690 142 94 118 chr18 36810017 36810061 -49867487 + L1MD2 LINE L1 5859 5903 -456 2511 84 8 19 chr18 36810061 36810420 -49867128 - THE1A LTR MaLR 0 355 1 690 142 94 118 chr18 36810420 36810587 -49866961 + L1MD2 LINE L1 5903 6065 -294 455 171 13 0 chr18 36811244 36811395 -49866153 + L1MD2 LINE L1 6064 6267 -92 698 183 135 22 chr18 36812880 36813110 -49864438 - L1MB8 LINE L1 0 6178 5923 1466 115 66 8 chr18 36813110 36813353 -49864195 - Tigger3(Golem) DNA MER2_type -2 3027 2771 506 205 36 0 chr18 36813350 36813462 -49864086 - Tigger3(Golem) DNA MER2_type -2887 142 27 * 2676 199 33 7 chr18 36813473 36814168 -49863380 - L1MB8 LINE L1 -255 5923 5215 446 351 96 72 chr18 36815062 36815618 -49861930 - L1M2 LINE L1 -5463 1386 844 28 48 0 0 chr18 36815618 36815660 -49861888 + GC_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr18 36815670 36815690 -49861858 + (CCG)n Simple_repeat Simple_repeat 3 22 0 446 351 96 72 chr18 36815690 36815930 -49861618 - L1M2 LINE L1 -6013 836 642 342 273 140 7 chr18 36816532 36816682 -49860866 - MIR SINE MIR -76 186 17 581 183 153 0 chr18 36816701 36816838 -49860710 - MER3 DNA MER1_type 0 209 52 378 198 66 57 chr18 36816869 36816975 -49860573 - L2 LINE L2 -10 3262 3156 270 294 33 0 chr18 36817025 36817117 -49860431 + MER5A DNA MER1_type 10 104 -85 452 321 14 21 chr18 36817295 36817435 -49860113 + L2 LINE L2 3134 3272 0 273 191 0 0 chr18 36817464 36817511 -49860037 + AluSc SINE Alu 132 178 -121 775 226 28 0 chr18 36817817 36817998 -49859550 - L1MD3 LINE L1 -169 7826 7641 193 262 75 67 chr18 36818399 36818428 -49859120 - L2 LINE L2 -1 3312 3285 2072 142 12 32 chr18 36818428 36818772 -49858776 - MER1B DNA MER1_type 0 337 1 193 262 75 67 chr18 36818772 36818986 -49858562 - L2 LINE L2 -28 3285 3019 3556 205 121 46 chr18 36819322 36819918 -49857630 - L1MD1 LINE L1 -85 6551 6001 285 114 0 0 chr18 36819918 36819962 -49857586 - Alu SINE Alu -258 44 1 3556 205 121 46 chr18 36819962 36820444 -49857104 - L1MD1 LINE L1 -635 6001 5556 207 114 0 0 chr18 36820444 36820479 -49857069 + (TG)n Simple_repeat Simple_repeat 2 36 0 3556 205 121 46 chr18 36820479 36821622 -49855926 - L1MD1 LINE L1 -1080 5556 4106 822 215 64 13 chr18 36821614 36821912 -49855636 - L1MD1 LINE L1 -3117 3423 3111 * 3445 203 97 31 chr18 36822039 36823604 -49853944 - L1MD1 LINE L1 -4636 1904 15 712 213 167 30 chr18 36823604 36823867 -49853681 - MER5C DNA MER1_type -25 299 1 21 57 0 0 chr18 36824108 36824143 -49853405 + AT_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr18 36824722 36824743 -49852805 + AT_rich Low_complexity Low_complexity 1 21 0 282 258 0 0 chr18 36825250 36825312 -49852236 - MIR SINE MIR -29 233 172 189 352 16 32 chr18 36825450 36825575 -49851973 - L2 LINE L2 -492 2822 2700 293 248 136 63 chr18 36825742 36825948 -49851600 - L2 LINE L2 -882 2432 2212 413 279 100 7 chr18 36826039 36826179 -49851369 - L2 LINE L2 -6 3307 3155 376 314 159 43 chr18 36826178 36826628 -49850920 - L2 LINE L2 -234 3038 2539 * 2157 116 0 3 chr18 36827560 36827854 -49849694 - AluSx SINE Alu -19 293 1 194 330 18 37 chr18 36828025 36828134 -49849414 - L2 LINE L2 -1681 1633 1527 313 198 60 43 chr18 36830768 36830884 -49846664 - LTR67 LTR ERVL -11 546 429 188 324 15 15 chr18 36831437 36831505 -49846043 - MIR SINE MIR -156 106 39 549 175 0 0 chr18 36831718 36831821 -49845727 - L1MA4 LINE L1 -130 6352 6250 246 32 0 0 chr18 36831833 36831864 -49845684 + (TCCCC)n Simple_repeat Simple_repeat 1 31 0 1908 97 35 0 chr18 36831980 36832239 -49845309 - AluSq SINE Alu -43 270 3 6541 188 79 17 chr18 36832242 36833273 -49844275 - L1MA4 LINE L1 -247 6235 5269 1716 189 30 10 chr18 36833273 36833570 -49843978 - AluJo SINE Alu -9 303 1 6541 188 79 17 chr18 36833570 36835720 -49841828 - L1MA4 LINE L1 -1213 5269 2805 3679 203 45 4 chr18 36835726 36837046 -49840502 - L1MA4 LINE L1 -4065 1263 599 1522 194 79 0 chr18 36837074 36837403 -49840145 - L1MA4 LINE L1 -4960 368 14 312 238 30 20 chr18 36837681 36837782 -49839766 + MLT1K LTR MaLR 484 585 -3 5365 118 25 6 chr18 36837830 36838711 -49838837 - L1PA15 LINE L1 0 6165 5270 295 346 148 19 chr18 36838776 36838938 -49838610 + MIR3 SINE MIR 19 201 -7 2012 128 55 0 chr18 36839134 36839424 -49838124 + AluSg SINE Alu 1 306 -4 384 191 0 24 chr18 36839561 36839645 -49837903 - L1MC5 LINE L1 -48 7913 7832 1182 279 72 8 chr18 36839897 36840274 -49837274 - MLT1I LTR MaLR -8 401 1 369 0 0 0 chr18 36840729 36840770 -49836778 + (TG)n Simple_repeat Simple_repeat 2 42 0 757 285 78 43 chr18 36841363 36841847 -49835701 - MLT1J LTR MaLR 0 511 11 419 274 103 11 chr18 36841872 36842222 -49835326 - L1M4 LINE L1 -1487 4659 4278 381 286 73 62 chr18 36842474 36842652 -49834896 - L2 LINE L2 -1 3312 3133 188 292 124 22 chr18 36843981 36844118 -49833430 - L2 LINE L2 -303 2969 2819 624 304 97 16 chr18 36844124 36844433 -49833115 + L2 LINE L2 2953 3286 -27 1655 195 88 38 chr18 36844513 36844990 -49832558 - Charlie1b DNA MER1_type -22 501 1 21 57 0 0 chr18 36845303 36845338 -49832210 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr18 36846354 36846382 -49831166 + AT_rich Low_complexity Low_complexity 1 28 0 2174 109 10 3 chr18 36846482 36846776 -49830772 + AluSq SINE Alu 1 296 -17 21 36 0 0 chr18 36846836 36846864 -49830684 + AT_rich Low_complexity Low_complexity 1 28 0 249 272 65 101 chr18 36846906 36847123 -49830425 + L2 LINE L2 3055 3263 -50 814 285 77 72 chr18 36847223 36848057 -49829491 + L1ME3A LINE L1 3 840 -5279 1135 268 66 63 chr18 36848097 36849161 -49828387 + L1ME3A LINE L1 3725 4791 -1338 953 183 11 0 chr18 36849774 36849949 -49827599 - MER58A DNA MER1_type 0 224 48 240 269 39 10 chr18 36849993 36850097 -49827451 + L1ME3A LINE L1 5822 5928 -225 636 279 75 5 chr18 36850141 36850342 -49827206 + MIR SINE MIR 44 258 -4 267 185 108 0 chr18 36850759 36850824 -49826724 + MIR SINE MIR 118 189 -73 299 330 57 9 chr18 36851097 36851203 -49826345 + L2 LINE L2 3203 3313 0 391 273 35 52 chr18 36851363 36851649 -49825899 - L1MC5 LINE L1 -45 7916 7636 296 231 190 83 chr18 36853949 36854165 -49823383 - MLT1L LTR MaLR -41 470 232 574 263 131 44 chr18 36854612 36855070 -49822478 - L1ME3 LINE L1 -333 5763 5346 1743 173 3 45 chr18 36855070 36855382 -49822166 - AluJo SINE Alu -5 307 9 574 263 131 44 chr18 36855382 36856117 -49821431 - L1ME3 LINE L1 -750 5346 4424 1875 164 3 43 chr18 36856126 36856450 -49821098 - AluJb SINE Alu -1 311 1 294 256 161 26 chr18 36856486 36856716 -49820832 - L1ME3 LINE L1 -1819 4261 4001 650 287 21 0 chr18 36856892 36857129 -49820419 - L1ME3 LINE L1 -4452 1809 1568 905 266 86 39 chr18 36857191 36858236 -49819312 - L1ME3 LINE L1 -4895 1366 234 390 288 129 45 chr18 36858313 36858622 -49818926 - L1MEc LINE L1 -3999 2397 2063 408 311 98 40 chr18 36858759 36858984 -49818564 - L2 LINE L2 -1 3312 3075 200 289 236 5 chr18 36859091 36859299 -49818249 - L2 LINE L2 -1052 2262 2007 221 299 62 52 chr18 36860114 36860211 -49817337 + L2 LINE L2 3139 3236 -36 647 270 129 51 chr18 36860467 36860900 -49816648 - MLT1L LTR MaLR -10 605 139 292 280 72 56 chr18 36861132 36861257 -49816291 - L2 LINE L2 -4 3268 3142 40752 50 8 1 chr18 36861487 36867560 -49809988 + L1PA5 LINE L1 1 6110 -44 234 309 101 68 chr18 36868133 36868340 -49809208 - MIR SINE MIR 0 262 49 2689 149 73 42 chr18 36868395 36868940 -49808608 - MER68 LTR ERV1 0 562 1 755 249 132 17 chr18 36869064 36869353 -49808195 - MER68 LTR ERV1 -25 537 216 474 204 48 66 chr18 36870145 36870312 -49807236 + MER103 DNA DNA 1 164 -2 13676 127 64 27 chr18 36870751 36872238 -49805310 + Tigger1 DNA MER2_type 1 1608 -810 2280 169 58 46 chr18 36872238 36872741 -49804807 - LTR22 LTR ERVK 0 509 1 13676 127 64 27 chr18 36872741 36873584 -49803964 + Tigger1 DNA MER2_type 1608 2418 0 2249 103 0 3 chr18 36873819 36874120 -49803428 - AluSq SINE Alu -13 300 1 258 256 0 105 chr18 36874212 36874345 -49803203 + L1M4 LINE L1 4054 4172 -1974 677 310 102 17 chr18 36874351 36874907 -49802641 + L1M4 LINE L1 4364 4967 -1179 786 180 0 8 chr18 36875018 36875146 -49802402 - FLAM_C SINE Alu -4 129 3 1723 142 18 11 chr18 36875195 36875470 -49802078 + AluJb SINE Alu 11 287 -25 377 272 94 64 chr18 36875632 36875867 -49801681 + L1ME3A LINE L1 5414 5655 -515 1072 221 86 22 chr18 36875882 36876149 -49801399 + MER58B DNA MER1_type 57 340 -1 466 301 75 9 chr18 36876169 36876382 -49801166 + L1ME3A LINE L1 5666 5892 -278 239 220 68 0 chr18 36876793 36876852 -49800696 - MLT1K LTR MaLR -17 571 509 1759 95 36 113 chr18 36877503 36877840 -49799708 + AluYb8 SINE Alu 1 311 -7 244 237 26 13 chr18 36878554 36878630 -49798918 - L1M4 LINE L1 -1158 4988 4912 1968 145 0 0 chr18 36878730 36879053 -49798495 + AluSx SINE Alu 1 323 0 225 0 0 0 chr18 36879240 36879265 -49798283 + (T)n Simple_repeat Simple_repeat 1 25 0 2446 146 22 37 chr18 36879378 36880295 -49797253 - L1P4 LINE L1 -392 5774 4873 1310 182 90 16 chr18 36880301 36880718 -49796830 + L1M4 LINE L1 5030 5470 -704 3087 161 22 7 chr18 36881309 36881855 -49795693 - MER41A LTR ERV1 0 554 1 223 240 0 0 chr18 36882044 36882094 -49795454 + MIR SINE MIR 105 154 -108 23 68 0 0 chr18 36882242 36882286 -49795262 + AT_rich Low_complexity Low_complexity 1 44 0 21 57 0 0 chr18 36882688 36882723 -49794825 + AT_rich Low_complexity Low_complexity 1 35 0 2403 73 13 0 chr18 36883011 36883312 -49794236 + AluSp SINE Alu 1 305 -8 182 210 123 49 chr18 36883378 36883459 -49794089 + MER5C DNA MER1_type 36 122 -202 456 304 44 20 chr18 36884117 36884321 -49793227 - L2 LINE L2 -1227 2087 1879 1933 151 0 0 chr18 36884909 36885193 -49792355 + AluSx SINE Alu 1 284 -28 243 103 0 0 chr18 36885193 36885232 -49792316 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 2404 68 13 13 chr18 36885419 36885729 -49791819 - AluY SINE Alu -1 310 1 424 274 226 3 chr18 36885760 36886074 -49791474 - L1M4 LINE L1 -1803 4343 3960 1931 200 109 18 chr18 36886078 36886178 -49791370 - MLT1F1 LTR MaLR -6 561 471 1988 144 128 10 chr18 36886178 36886561 -49790987 - MSTA LTR MaLR 0 428 1 1931 200 109 18 chr18 36886561 36886911 -49790637 - MLT1F1 LTR MaLR -96 471 70 395 269 28 83 chr18 36886994 36887210 -49790338 + L2 LINE L2 2242 2445 -869 308 318 60 33 chr18 36887452 36887603 -49789945 + L2 LINE L2 3115 3269 -44 22 0 0 0 chr18 36887687 36887709 -49789839 + AT_rich Low_complexity Low_complexity 1 22 0 658 186 31 0 chr18 36888099 36888228 -49789320 + FLAM_C SINE Alu 1 133 0 569 162 0 8 chr18 36888243 36888360 -49789188 + GA-rich Low_complexity Low_complexity 3 118 0 1620 101 0 28 chr18 36888451 36888698 -49788850 + Tigger5 DNA MER2_type 2084 2323 0 582 273 96 0 chr18 36888938 36889125 -49788423 - L1ME1 LINE L1 -5 6161 5957 1873 205 98 90 chr18 36889133 36890035 -49787513 - L1ME1 LINE L1 -357 5809 4884 6493 113 36 16 chr18 36890281 36891331 -49786217 - MER11C LTR ERVK 0 1071 1 26 74 0 0 chr18 36891602 36891656 -49785892 + AT_rich Low_complexity Low_complexity 1 54 0 548 261 77 4 chr18 36894381 36894606 -49782942 - L1M3 LINE L1 -722 5458 5210 33 56 0 0 chr18 36894650 36894704 -49782844 + AT_rich Low_complexity Low_complexity 1 54 0 30 0 0 0 chr18 36894813 36894843 -49782705 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr18 36895683 36895722 -49781826 + AT_rich Low_complexity Low_complexity 1 39 0 439 203 32 41 chr18 36896469 36896592 -49780956 - L2 LINE L2 -16 3297 3176 422 340 55 48 chr18 36896772 36897187 -49780361 - L2 LINE L2 -441 2873 2456 1995 132 6 25 chr18 36897275 36897593 -49779955 - AluSx SINE Alu 0 312 1 2333 112 0 0 chr18 36898903 36899208 -49778340 - AluSx SINE Alu -6 306 2 427 232 7 65 chr18 36901371 36901416 -49776132 - L1MC5 LINE L1 -48 7913 7867 2244 123 0 3 chr18 36901416 36901724 -49775824 + AluSx SINE Alu 1 307 -5 427 232 7 65 chr18 36901724 36901816 -49775732 - L1MC5 LINE L1 -94 7867 7784 518 136 150 41 chr18 36901832 36901979 -49775569 - L1MC5 LINE L1 -498 7463 7301 1736 253 108 12 chr18 36904319 36904892 -49772656 - L1ME3 LINE L1 -26 6136 5509 440 313 83 5 chr18 36904912 36905104 -49772444 + HAL1 LINE L1 486 692 -1815 2365 253 98 38 chr18 36905209 36906489 -49771059 + HAL1 LINE L1 729 2160 -347 383 191 22 22 chr18 36907167 36907256 -49770292 - L1MC5 LINE L1 -36 7925 7837 597 285 151 55 chr18 36907287 36907599 -49769949 + MLT1F LTR MaLR 13 354 -188 1212 184 83 64 chr18 36907608 36908015 -49769533 - L1MC5 LINE L1 -219 7742 7328 367 236 171 39 chr18 36908176 36908561 -49768987 + L1M4 LINE L1 2907 3342 -2804 409 268 123 42 chr18 36908562 36908744 -49768804 + L1M4 LINE L1 3127 3293 -2853 1427 147 0 8 chr18 36908744 36908989 -49768559 + L1MB1 LINE L1 5921 6163 -5 409 268 123 42 chr18 36908989 36909138 -49768410 + L1M4 LINE L1 3293 3485 -2661 2183 102 7 0 chr18 36909159 36909453 -49768095 + AluY SINE Alu 1 296 -15 2143 280 86 61 chr18 36909522 36910209 -49767339 + L1M4 LINE L1 3607 4275 -1871 1792 176 0 13 chr18 36910209 36910511 -49767037 + AluJo SINE Alu 3 300 -12 2143 280 86 61 chr18 36910511 36911271 -49766277 + L1M4 LINE L1 4275 5090 -1056 1229 163 0 19 chr18 36911427 36911636 -49765912 - AluJb SINE Alu -23 289 85 484 117 39 0 chr18 36911738 36911815 -49765733 + MER116 DNA Mariner 1 80 0 497 258 192 0 chr18 36912253 36912404 -49765144 + MIR SINE MIR 54 233 -29 537 294 154 9 chr18 36913017 36913231 -49764317 - MIR SINE MIR -10 252 8 519 290 57 0 chr18 36913581 36913757 -49763791 + MIR SINE MIR 51 236 -26 753 172 8 0 chr18 36913814 36913936 -49763612 - FLAM_C SINE Alu -10 123 1 3457 138 32 7 chr18 36914022 36914580 -49762968 - MER7C DNA MER2_type 0 602 31 441 231 8 41 chr18 36914676 36914797 -49762751 - LTR41 LTR ERVL -586 187 71 2515 68 0 0 chr18 36914901 36915209 -49762339 + AluY SINE Alu 1 308 -3 23 0 0 0 chr18 36915882 36915905 -49761643 + AT_rich Low_complexity Low_complexity 1 23 0 198 222 0 0 chr18 36917342 36917378 -49760170 + L2 LINE L2 3263 3298 -15 22 56 0 0 chr18 36918126 36918162 -49759386 + AT_rich Low_complexity Low_complexity 1 36 0 320 208 20 30 chr18 36918671 36918772 -49758776 - MER103 DNA DNA -46 120 21 602 298 122 70 chr18 36920081 36920742 -49756806 + L2 LINE L2 2584 3271 -1 283 196 0 0 chr18 36920894 36920950 -49756598 - MIR SINE MIR -94 168 113 573 284 68 11 chr18 36921998 36922188 -49755360 + MIR SINE MIR 14 214 -48 189 0 0 0 chr18 36923108 36923129 -49754419 + (A)n Simple_repeat Simple_repeat 1 21 0 24 0 0 0 chr18 36923869 36923893 -49753655 + AT_rich Low_complexity Low_complexity 1 24 0 322 271 115 62 chr18 36924806 36925259 -49752289 + L1MEd LINE L1 3 479 -5640 648 290 94 65 chr18 36925261 36925992 -49751556 + L1M4 LINE L1 3604 4313 -1833 1811 163 0 7 chr18 36925992 36926286 -49751262 + AluJb SINE Alu 9 300 -12 648 290 94 65 chr18 36926286 36926950 -49750598 + L1M4 LINE L1 4313 5039 -1107 793 176 28 66 chr18 36926952 36927134 -49750414 + AluJb SINE Alu 132 306 -6 240 302 28 28 chr18 36930125 36930231 -49747317 + MIR3 SINE MIR 96 201 -7 260 255 10 98 chr18 36931496 36931598 -49745950 + MIR SINE MIR 157 249 -13 459 347 73 26 chr18 36931644 36931984 -49745564 - L3 LINE CR1 -730 847 492 21 0 0 0 chr18 36932846 36932867 -49744681 + AT_rich Low_complexity Low_complexity 1 21 0 2420 257 194 33 chr18 36933115 36934575 -49742973 - L2 LINE L2 -1 3312 1613 1640 162 3 16 chr18 36934578 36934886 -49742662 + L1MB2 LINE L1 5447 5750 -421 2213 147 13 5 chr18 36934997 36935392 -49742156 + L1MB2 LINE L1 5774 6171 0 511 278 52 61 chr18 36935412 36935739 -49741809 - L2 LINE L2 -1714 1600 1277 431 273 238 12 chr18 36936802 36937020 -49740528 - MIR SINE MIR -2 260 12 345 284 47 8 chr18 36937342 36937469 -49740079 - MIR SINE MIR -6 256 125 442 157 11 11 chr18 36937664 36937753 -49739795 - MER103 DNA DNA -76 90 2 197 233 33 67 chr18 36937807 36937867 -49739681 - MIR SINE MIR -141 121 64 1932 146 0 3 chr18 36938385 36938703 -49738845 + AluSx SINE Alu 1 317 0 818 150 33 20 chr18 36938705 36938858 -49738690 - MER3 DNA MER1_type -54 155 1 2068 87 0 24 chr18 36938895 36939208 -49738340 + AluSg1 SINE Alu 1 306 0 713 150 0 17 chr18 36940864 36940984 -49736564 - AluJb SINE Alu -194 118 1 1711 189 20 14 chr18 36941271 36941567 -49735981 - AluJo SINE Alu -14 298 1 1960 159 7 0 chr18 36944511 36944807 -49732741 - AluJb SINE Alu -14 298 1 2427 84 3 0 chr18 36944834 36945143 -49732405 - AluSq SINE Alu -3 310 1 236 390 56 20 chr18 36945419 36945614 -49731934 + L2 LINE L2 2977 3178 -94 399 220 30 10 chr18 36945763 36945863 -49731685 - MER20B DNA MER1_type -620 163 62 339 273 163 64 chr18 36945944 36946270 -49731278 - MLT1J LTR MaLR -54 457 100 245 195 0 0 chr18 36946234 36946275 -49731273 - LTR67 LTR ERVL -418 139 99 * 2099 70 40 33 chr18 36946428 36946729 -49730819 + AluY SINE Alu 1 303 -8 581 274 57 24 chr18 36946806 36947018 -49730530 - LTR16A LTR ERVL 0 450 232 322 335 44 63 chr18 36947081 36947287 -49730261 - MIR3 SINE MIR -1 207 6 736 273 83 5 chr18 36948202 36948418 -49729130 - MIR SINE MIR -12 250 18 274 273 99 33 chr18 36949432 36949553 -49727995 - MIR3 SINE MIR -39 169 41 234 62 0 0 chr18 36949636 36949668 -49727880 + (TC)n Simple_repeat Simple_repeat 1 32 0 21 36 0 0 chr18 36950395 36950423 -49727125 + AT_rich Low_complexity Low_complexity 1 28 0 775 215 12 18 chr18 36952166 36952329 -49725219 + FRAM SINE Alu 1 162 -4 2171 243 92 17 chr18 36952857 36953737 -49723811 + L1ME2 LINE L1 4288 5233 -913 1731 228 194 38 chr18 36953786 36954229 -49723319 + L1ME2 LINE L1 5307 5680 -484 1702 182 11 3 chr18 36954229 36954515 -49723033 + AluJo SINE Alu 1 288 -24 1731 228 194 38 chr18 36954515 36954804 -49722744 + L1ME2 LINE L1 5680 6153 -11 231 292 18 26 chr18 36954858 36954971 -49722577 + L1MEd LINE L1 39 150 -5969 2007 125 0 43 chr18 36955129 36955432 -49722116 + AluSx SINE Alu 1 290 -22 1883 138 21 0 chr18 36955728 36956019 -49721529 + AluSx SINE Alu 1 297 -15 256 294 50 25 chr18 36956414 36956574 -49720974 + L1MEd LINE L1 349 512 -5607 402 273 87 35 chr18 36956823 36957134 -49720414 + L1MEd LINE L1 739 1065 -5054 610 211 127 31 chr18 36957191 36957419 -49720129 - MLT1C LTR MaLR -130 337 88 1475 218 102 9 chr18 36957424 36957847 -49719701 + MLT1C LTR MaLR 6 467 0 717 161 46 35 chr18 36957923 36958097 -49719451 + L1M4 LINE L1 3548 3723 -2423 13725 125 30 23 chr18 36958106 36960485 -49717063 + Tigger1 DNA MER2_type 24 2418 0 2664 208 69 7 chr18 36960485 36961167 -49716381 + L1M4 LINE L1 3722 4445 -1701 1634 322 17 16 chr18 36961174 36961755 -49715793 + L1PA16 LINE L1 790 1371 -6203 569 276 0 37 chr18 36961783 36962029 -49715519 + L1PA16 LINE L1 2086 2298 -5276 6894 60 6 4 chr18 36962730 36964289 -49713259 - L1PA5 LINE L1 -2 6152 4590 15302 205 19 24 chr18 36964406 36967044 -49710504 + L1PA16 LINE L1 2285 4935 -2669 297 0 0 0 chr18 36967044 36967077 -49710471 + (TAA)n Simple_repeat Simple_repeat 1 33 0 15302 205 19 24 chr18 36967077 36969133 -49708415 + L1PA16 LINE L1 4935 6987 -617 2497 111 25 22 chr18 36969133 36969494 -49708054 + THE1B LTR MaLR 1 362 -2 15302 205 19 24 chr18 36969494 36970109 -49707439 + L1PA16 LINE L1 6987 7604 0 2656 205 43 90 chr18 36970085 36970222 -49707326 + L1M4 LINE L1 5841 5983 -1601 * 3641 166 12 41 chr18 36970222 36970885 -49706663 - MER73 LTR ERVL 0 644 1 2656 205 43 90 chr18 36970885 36970899 -49706649 + L1M4 LINE L1 5983 5996 -1588 2967 144 137 32 chr18 36970899 36971455 -49706093 - LTR18B LTR ERVL 0 614 1 2656 205 43 90 chr18 36971455 36972205 -49705343 + L1M4 LINE L1 5996 6701 -883 1473 195 17 27 chr18 36972206 36972498 -49705050 + AluJo SINE Alu 1 289 -23 214 273 18 18 chr18 36972729 36972784 -49704764 + MIR SINE MIR 7 61 -201 503 278 67 10 chr18 36973248 36973457 -49704091 + L2 LINE L2 2670 2890 -424 343 305 201 11 chr18 36973479 36973843 -49703705 + L1M4 LINE L1 3711 4143 -2003 926 298 155 20 chr18 36973946 36974772 -49702776 - L2 LINE L2 -1 3312 2375 549 256 16 47 chr18 36974839 36975030 -49702518 + MLT1D-int LTR MaLR 1186 1370 -1 1795 189 60 68 chr18 36975035 36975539 -49702009 + MLT1D LTR MaLR 5 504 -1 2069 184 93 30 chr18 36975539 36976000 -49701548 + LTR2B LTR ERV1 1 490 0 5360 204 61 54 chr18 36976005 36977090 -49700458 - L1MDa LINE L1 -2282 4258 3182 8132 167 39 22 chr18 36977090 36979247 -49698301 + L1PA13 LINE L1 3987 6163 0 5360 204 61 54 chr18 36979247 36979502 -49698046 - L1MDa LINE L1 -3358 3182 2930 183 100 0 0 chr18 36979502 36979532 -49698016 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1778 169 4 0 chr18 36979534 36979813 -49697735 - AluJb SINE Alu -32 280 1 5360 204 61 54 chr18 36979813 36979917 -49697631 - L1MDa LINE L1 -3610 2930 2828 289 108 0 0 chr18 36979917 36979954 -49697594 + U2 snRNA snRNA 1 37 -151 5360 204 61 54 chr18 36979954 36980454 -49697094 - L1MDa LINE L1 -3712 2828 2333 1462 248 114 61 chr18 36980454 36981157 -49696391 + LTR68 LTR ERV1 1 740 0 5360 204 61 54 chr18 36981157 36981351 -49696197 - L1MDa LINE L1 -4207 2333 2065 1547 187 3 40 chr18 36981351 36981672 -49695876 - AluJb SINE Alu -3 309 1 5360 204 61 54 chr18 36981672 36981724 -49695824 - L1MDa LINE L1 -4475 2065 2015 1482 162 104 16 chr18 36981721 36981881 -49695667 - L1MB8 LINE L1 0 6178 6019 * 2789 178 69 37 chr18 36981881 36982773 -49694775 - L1MD3 LINE L1 -376 5802 5048 6171 105 18 11 chr18 36982773 36984055 -49693493 + L1PA16 LINE L1 4873 6155 -11 2789 178 69 37 chr18 36984055 36984164 -49693384 - L1MD3 LINE L1 -1130 5048 4944 * 4107 188 38 24 chr18 36984150 36984543 -49693005 - L1MDa LINE L1 -4496 2044 1658 1702 138 8 0 chr18 36984543 36984796 -49692752 - AluSx SINE Alu -2 310 56 4107 188 38 24 chr18 36984796 36985362 -49692186 - L1MDa LINE L1 -4882 1658 1072 1291 246 39 28 chr18 36985343 36985401 -49692147 - L1MDa LINE L1 -6174 366 310 * 2723 102 19 16 chr18 36985401 36985775 -49691773 + THE1C LTR MaLR 1 375 0 1291 246 39 28 chr18 36985775 36985881 -49691667 - L1MDa LINE L1 -6230 310 207 333 0 0 0 chr18 36985881 36985918 -49691630 + (CA)n Simple_repeat Simple_repeat 2 38 0 1291 246 39 28 chr18 36985918 36986110 -49691438 - L1MDa LINE L1 -6333 207 5 1762 214 78 45 chr18 36986258 36986743 -49690805 - MLT1D LTR MaLR -4 501 1 257 290 40 30 chr18 36986830 36986930 -49690618 - MIR SINE MIR -78 184 84 242 273 64 27 chr18 36987048 36987158 -49690390 + MIR SINE MIR 20 133 -129 255 103 0 0 chr18 36987276 36987315 -49690233 + (CCCTG)n Simple_repeat Simple_repeat 1 39 0 232 228 0 53 chr18 36987790 36987847 -49689701 - MIR SINE MIR -162 100 47 228 67 0 0 chr18 36987981 36988011 -49689537 + (TGGGGG)n Simple_repeat Simple_repeat 3 32 0 242 307 60 27 chr18 36988198 36988348 -49689200 + MIR3 SINE MIR 35 189 -19 319 163 0 0 chr18 36988399 36988448 -49689100 - L2 LINE L2 0 3313 3265 1356 193 84 11 chr18 36988829 36989128 -49688420 + MER39 LTR ERV1 1 381 -326 * 3489 122 30 66 chr18 36989126 36989735 -49687813 - LTR59 LTR ERV1 -10 587 1 358 187 67 0 chr18 36989736 36989806 -49687742 + MER39 LTR ERV1 384 458 -249 1347 154 23 5 chr18 36989806 36990027 -49687521 - MER41B LTR ERV1 0 635 411 747 128 8 0 chr18 36990025 36990142 -49687406 - MER41B LTR ERV1 -517 118 1 * 1315 117 64 44 chr18 36990142 36990354 -49687194 + MER39 LTR ERV1 455 674 -33 2565 216 126 15 chr18 36990354 36991015 -49686533 - MER50 LTR ERV1 0 734 1 1315 117 64 44 chr18 36991015 36991050 -49686498 + MER39 LTR ERV1 674 707 0 1924 203 41 68 chr18 36991087 36991547 -49686001 - LTR9 LTR ERV1 -69 543 99 2120 126 3 19 chr18 36991547 36991857 -49685691 + AluSx SINE Alu 1 305 -7 1924 203 41 68 chr18 36991857 36991954 -49685594 - LTR9 LTR ERV1 -513 99 1 2862 121 39 26 chr18 36992166 36992798 -49684750 - LTR8A LTR ERV1 0 727 1 361 161 41 8 chr18 36993301 36993377 -49684171 + MER5A DNA MER1_type 36 118 -71 1781 161 86 20 chr18 36993387 36993490 -49684058 - LTR37A LTR ERV1 0 426 331 3080 132 69 4 chr18 36993490 36993966 -49683582 + MER84 LTR ERV1 1 507 0 1781 161 86 20 chr18 36993966 36994259 -49683289 - LTR37A LTR ERV1 -95 331 4 375 271 74 0 chr18 36995614 36995736 -49681812 - L2 LINE L2 -212 3060 2930 310 386 26 16 chr18 36996026 36996215 -49681333 + L1ME LINE L1 466 656 -5874 1165 262 29 15 chr18 36996277 36996620 -49680928 - HERVL40 LTR ERVL -2104 3426 3079 767 284 21 0 chr18 36996671 36996861 -49680687 - HERVL40 LTR ERVL -2623 2907 2714 1482 238 46 55 chr18 36997051 36997419 -49680129 + L1ME LINE L1 2015 2385 -4336 2270 125 0 0 chr18 36997419 36997724 -49679824 + AluSx SINE Alu 1 305 -7 1482 238 46 55 chr18 36997724 36998151 -49679397 + L1ME LINE L1 2385 2846 -3875 3985 141 58 43 chr18 36998164 36998672 -49678876 + L1MA4 LINE L1 4771 5270 -1030 1483 182 14 44 chr18 36998672 36998969 -49678579 + AluJo SINE Alu 3 290 -22 3985 141 58 43 chr18 36998969 36999633 -49677915 + L1MA4 LINE L1 5270 5950 -350 23 97 0 0 chr18 36999993 37000065 -49677483 + AT_rich Low_complexity Low_complexity 1 72 0 22 35 0 0 chr18 37000147 37000176 -49677372 + AT_rich Low_complexity Low_complexity 1 29 0 183 80 0 0 chr18 37001126 37001151 -49676397 + (TG)n Simple_repeat Simple_repeat 2 26 0 28 48 0 0 chr18 37001458 37001500 -49676048 + AT_rich Low_complexity Low_complexity 1 42 0 1224 242 20 0 chr18 37002667 37002960 -49674588 + L1ME LINE L1 2845 3143 -3397 * 1993 136 8 10 chr18 37002956 37003449 -49674099 - L1P4 LINE L1 -699 5469 4980 1059 210 38 0 chr18 37003455 37003693 -49673855 + L1P LINE L1 4802 5048 -1098 1990 141 0 3 chr18 37004841 37005125 -49672423 + AluSx SINE Alu 5 287 -25 712 190 5 123 chr18 37006285 37006417 -49671131 - MLT1A2 LTR MaLR 0 374 274 1383 188 59 19 chr18 37006417 37006732 -49670816 - AluJb SINE Alu 0 327 2 712 190 5 123 chr18 37006732 37006809 -49670739 - MLT1A2 LTR MaLR -100 274 189 22 0 0 0 chr18 37008246 37008268 -49669280 + AT_rich Low_complexity Low_complexity 1 22 0 495 164 0 132 chr18 37008469 37008621 -49668927 - MER96B DNA MER1_type? -283 134 3 340 344 21 36 chr18 37008711 37008903 -49668645 + MIR3 SINE MIR 6 194 -14 24 0 0 0 chr18 37009170 37009194 -49668354 + AT_rich Low_complexity Low_complexity 1 24 0 340 176 59 0 chr18 37009333 37009418 -49668130 + L1MB4 LINE L1 6086 6175 -5 2297 229 91 9 chr18 37009437 37010108 -49667440 + L1M4 LINE L1 2409 3134 -3012 44435 35 11 3 chr18 37010134 37016238 -49661310 + L1PA3 LINE L1 1 6155 0 626 235 57 72 chr18 37016215 37016385 -49661163 + L1M4 LINE L1 3120 3291 -2855 * 2284 131 0 0 chr18 37016385 37016697 -49660851 + AluSx SINE Alu 1 312 0 626 235 57 72 chr18 37016697 37016913 -49660635 + L1M4 LINE L1 3291 3500 -2646 4579 180 50 32 chr18 37016974 37018734 -49658814 - L1MB8 LINE L1 -6 6172 4395 2196 134 0 0 chr18 37018734 37019041 -49658507 - AluSx SINE Alu -5 307 1 4579 180 50 32 chr18 37019041 37019246 -49658302 - L1MB8 LINE L1 -1783 4395 4195 775 231 35 0 chr18 37021249 37021418 -49656130 - MER63 DNA MER1_type -1 1059 885 614 245 88 92 chr18 37021632 37021808 -49655740 - MER34C LTR ERV1 0 787 612 2072 122 58 0 chr18 37021808 37022102 -49655446 - AluSx SINE Alu -1 311 1 614 245 88 92 chr18 37022102 37022482 -49655066 - MER34C LTR ERV1 -175 612 5 902 296 110 29 chr18 37023969 37024703 -49652845 + L2 LINE L2 2265 3059 -254 3470 139 41 71 chr18 37024765 37025348 -49652200 + LTR8A LTR ERV1 1 559 -168 2088 134 16 0 chr18 37025348 37025654 -49651894 + AluSx SINE Alu 1 311 -1 3470 139 41 71 chr18 37025654 37025819 -49651729 + LTR8A LTR ERV1 559 727 0 1388 223 44 38 chr18 37027775 37028255 -49649293 - L1MC5 LINE L1 -26 7935 7453 289 228 79 55 chr18 37028405 37028607 -49648941 - HAL1 LINE L1 -1811 696 490 1502 229 43 22 chr18 37028677 37029192 -49648356 - MER90 LTR ERV1 0 614 2 244 255 49 98 chr18 37029315 37029499 -49648049 - HAL1 LINE L1 -2298 209 35 228 35 0 0 chr18 37030401 37030430 -49647118 + (TA)n Simple_repeat Simple_repeat 1 29 0 216 118 20 20 chr18 37030723 37030774 -49646774 + L2 LINE L2 3014 3064 -208 853 179 56 5 chr18 37031474 37031669 -49645879 + MIR SINE MIR 22 226 -36 507 306 61 18 chr18 37031696 37031925 -49645623 - MIR SINE MIR -23 239 1 1603 209 55 29 chr18 37031962 37032417 -49645131 + MLT1C LTR MaLR 1 467 0 218 192 39 0 chr18 37033457 37033509 -49644039 - MIR SINE MIR -85 177 124 1569 220 41 24 chr18 37033663 37034114 -49643434 + MER89 LTR ERV1 1 558 -1 405 247 341 19 chr18 37035085 37035332 -49642216 + L2 LINE L2 2907 3073 -240 375 78 0 0 chr18 37035332 37035383 -49642165 + (TA)n Simple_repeat Simple_repeat 2 52 0 405 247 341 19 chr18 37035383 37035443 -49642105 + L2 LINE L2 3073 3313 0 1496 218 31 95 chr18 37035678 37036257 -49641291 + L1MC5 LINE L1 6688 7229 -732 914 269 70 43 chr18 37036448 37036980 -49640568 + L1MC5 LINE L1 7309 7854 -107 556 150 72 42 chr18 37037027 37037194 -49640354 - MER5C DNA MER1_type -25 299 128 1158 148 0 0 chr18 37037251 37037420 -49640128 - FRAM SINE Alu -10 166 1 1867 163 55 13 chr18 37037841 37038222 -49639326 + L1MA6 LINE L1 5900 6296 -4 24 0 0 0 chr18 37038222 37038246 -49639302 + AT_rich Low_complexity Low_complexity 1 24 0 1553 211 7 14 chr18 37038749 37039061 -49638487 - AluJb SINE Alu 0 310 1 412 244 52 0 chr18 37039609 37039724 -49637824 - MER5C DNA MER1_type -200 124 4 1271 222 41 40 chr18 37039754 37040240 -49637308 - MLT1E1 LTR MaLR 0 654 122 990 161 0 0 chr18 37040280 37040435 -49637113 + AluSg/x SINE Alu 136 290 -22 43375 54 3 1 chr18 37040445 37046571 -49630977 + L1PA5 LINE L1 11 6153 -1 382 62 0 0 chr18 37046562 37046627 -49630921 + L1P LINE L1 3249 3313 -2833 * 743 164 42 6 chr18 37046648 37046813 -49630735 - L1M4 LINE L1 -2110 4036 3866 1922 129 29 0 chr18 37046847 37047126 -49630422 - AluSc SINE Alu -21 288 2 2025 123 3 10 chr18 37047427 37047728 -49629820 + AluSg SINE Alu 1 299 -11 184 140 120 20 chr18 37047753 37047803 -49629745 + L2 LINE L2 3214 3268 -4 212 276 74 80 chr18 37047932 37048095 -49629453 + L3 LINE CR1 1276 1437 -140 887 199 100 50 chr18 37049624 37049911 -49627637 + MLT2B1 LTR ERVL 118 464 -56 2091 153 40 0 chr18 37049911 37050257 -49627291 - MER47A DNA MER2_type -6 360 1 270 73 0 0 chr18 37050285 37050326 -49627222 + (CA)n Simple_repeat Simple_repeat 2 42 0 1089 161 32 177 chr18 37050333 37050649 -49626899 + Tigger7 DNA MER2_type 1 270 -2217 558 176 11 0 chr18 37050649 37050740 -49626808 + Tigger7 DNA MER2_type 2395 2486 -1 387 0 0 0 chr18 37050774 37050817 -49626731 + (CA)n Simple_repeat Simple_repeat 2 44 0 556 183 177 9 chr18 37052000 37052147 -49625401 + L1MB7 LINE L1 5731 5900 -284 277 302 119 8 chr18 37052279 37052405 -49625143 + MIR SINE MIR 53 192 -70 245 234 53 21 chr18 37052439 37052533 -49625015 + MLT1H1 LTR MaLR 17 113 -480 436 227 142 48 chr18 37052611 37052809 -49624739 + MLT1H1 LTR MaLR 246 469 -85 1001 264 137 38 chr18 37052813 37052970 -49624578 - MER90 LTR ERV1 -18 557 417 1958 144 3 26 chr18 37052970 37053282 -49624266 - AluSx SINE Alu -7 305 1 1001 264 137 38 chr18 37053282 37053627 -49623921 - MER90 LTR ERV1 -158 417 5 251 126 64 31 chr18 37053637 37053708 -49623840 + MLT1H1 LTR MaLR 473 565 -2 582 153 0 0 chr18 37055454 37055565 -49621983 + (TGGA)n Simple_repeat Simple_repeat 4 114 0 2517 99 31 6 chr18 37056221 37056576 -49620972 + THE1B LTR MaLR 1 364 0 255 61 0 0 chr18 37058406 37058439 -49619109 + (TG)n Simple_repeat Simple_repeat 1 33 0 210 105 0 0 chr18 37058439 37058477 -49619071 + (CAGA)n Simple_repeat Simple_repeat 2 39 0 1661 175 0 14 chr18 37058478 37058758 -49618790 - AluJo SINE Alu -36 276 1 962 246 75 59 chr18 37058766 37059222 -49618326 - LTR33A LTR ERVL -58 465 3 298 266 23 55 chr18 37059812 37059940 -49617608 + MIR SINE MIR 120 243 -19 410 49 16 0 chr18 37060144 37060205 -49617343 + (CA)n Simple_repeat Simple_repeat 1 62 0 1833 217 154 10 chr18 37060600 37060726 -49616822 + L1MC4 LINE L1 6459 6566 -1476 270 0 0 0 chr18 37060726 37060756 -49616792 + (TG)n Simple_repeat Simple_repeat 2 31 0 1833 217 154 10 chr18 37060756 37061109 -49616439 + L1MC4 LINE L1 6566 7007 -1035 1884 243 79 24 chr18 37061116 37061663 -49615885 - MER90 LTR ERV1 -37 577 1 1446 150 113 0 chr18 37061776 37062069 -49615479 - L1MC2 LINE L1 0 6344 6019 20724 52 8 1 chr18 37062071 37065450 -49612098 + L1PA6 LINE L1 2746 6154 0 1040 179 13 67 chr18 37065471 37065695 -49611853 - AluJo SINE Alu -100 212 1 2563 186 5 0 chr18 37065695 37066142 -49611406 - L1MC2 LINE L1 -369 5975 5527 1233 183 53 4 chr18 37066136 37066398 -49611150 + L1MC3 LINE L1 7504 7778 -7 * 420 268 134 22 chr18 37066417 37066648 -49610900 + L1MC5 LINE L1 7161 7417 -544 1639 153 12 4 chr18 37066724 37066979 -49610569 + AluJo SINE Alu 29 285 -27 1727 103 45 76 chr18 37067176 37067506 -49610042 - MER52C LTR ERV1 0 1278 959 8090 116 8 6 chr18 37067606 37069648 -49607900 + HERVH LTR ERV1 3168 5225 -1866 1376 120 23 5 chr18 37069649 37069865 -49607683 + HERVH LTR ERV1 5600 5819 -1894 2278 114 50 13 chr18 37069865 37070241 -49607307 + HERVH LTR ERV1 7324 7713 0 3055 80 25 20 chr18 37070241 37070679 -49606869 + LTR7 LTR ERV1 1 440 -10 559 82 0 0 chr18 37070689 37070762 -49606786 - AluS SINE Alu -239 74 2 598 204 35 21 chr18 37070776 37070918 -49606630 + LTR38 LTR ERV1 413 556 0 * 1694 118 13 86 chr18 37070918 37071232 -49606316 - MER65A LTR ERV1 -154 291 1 245 290 14 29 chr18 37071266 37071404 -49606144 + LTR37B LTR ERV1 171 306 -162 660 231 138 5 chr18 37072257 37072460 -49605088 - MER89 LTR ERV1 0 559 330 951 213 67 104 chr18 37072482 37073007 -49604541 - PABL_B LTR ERV1 -20 647 1 493 206 15 52 chr18 37073008 37073144 -49604404 - MER89 LTR ERV1 -232 327 197 * 595 112 0 0 chr18 37073117 37073206 -49604342 - MER89 LTR ERV1 -470 89 1 2139 134 39 31 chr18 37073433 37073792 -49603756 - THE1B LTR MaLR 0 364 3 2633 86 127 5 chr18 37075293 37075644 -49601904 + MLT2A1 LTR ERVL 3 310 -134 336 48 0 0 chr18 37075644 37075686 -49601862 + (TC)n Simple_repeat Simple_repeat 2 43 0 216 0 0 0 chr18 37075685 37075709 -49601839 + (TA)n Simple_repeat Simple_repeat 1 24 0 * 2633 86 127 5 chr18 37075686 37075751 -49601797 + MLT2A1 LTR ERVL 310 444 0 14772 78 24 2 chr18 37075751 37077648 -49599900 + HERVL-A1 LTR ERVL 1 1940 -3714 1114 158 0 0 chr18 37077748 37077919 -49599629 + AluSg/x SINE Alu 127 297 -13 591 185 19 0 chr18 37077936 37078044 -49599504 + MLT1D LTR MaLR 396 505 0 373 250 125 24 chr18 37078044 37078212 -49599336 + HAL1 LINE L1 2323 2507 0 376 297 29 23 chr18 37078302 37078477 -49599071 + L1M4 LINE L1 3595 3770 -2376 1353 208 61 115 chr18 37078497 37079020 -49598528 - MLT1D LTR MaLR -8 497 3 954 243 91 116 chr18 37079038 37079642 -49597906 + L1M4 LINE L1 3786 4360 -1786 1652 186 25 4 chr18 37079642 37079922 -49597626 + AluJb SINE Alu 1 286 -26 954 243 91 116 chr18 37079922 37080260 -49597288 + L1M4 LINE L1 4360 4705 -1441 1124 178 26 0 chr18 37080694 37080924 -49596624 - Charlie2 DNA MER1_type -651 2211 1976 23 54 0 0 chr18 37080988 37081025 -49596523 + AT_rich Low_complexity Low_complexity 1 37 0 290 187 122 29 chr18 37081140 37081279 -49596269 + Charlie2 DNA MER1_type 2390 2541 -321 1283 151 0 39 chr18 37081601 37081837 -49595711 - AluJb SINE Alu 0 313 86 2175 128 0 0 chr18 37081945 37082241 -49595307 + AluSx SINE Alu 3 298 -14 669 188 65 19 chr18 37083486 37083640 -49593908 - MER31B LTR ERV1 0 466 306 * 2694 148 40 0 chr18 37083628 37084054 -49593494 + MER34C LTR ERV1 5 447 -138 2527 202 10 17 chr18 37084174 37084655 -49592893 + LTR31 LTR ERV1 127 604 -15 824 118 37 7 chr18 37084665 37084800 -49592748 + MER34C LTR ERV1 443 581 -4 1736 143 28 56 chr18 37084805 37085126 -49592422 - MER31B LTR ERV1 -142 324 13 4377 117 12 61 chr18 37085308 37086034 -49591514 - LTR8 LTR ERV1 0 691 1 890 122 47 0 chr18 37086165 37086313 -49591235 - MER65A LTR ERV1 0 445 291 704 146 0 0 chr18 37086322 37086425 -49591123 - MER4D LTR ERV1 0 903 801 1234 183 8 63 chr18 37086426 37086694 -49590854 + LTR8 LTR ERV1 1 253 -438 963 448 56 3 chr18 37086696 37086982 -49590566 + AluSx SINE Alu 2 302 0 777 128 0 0 chr18 37086982 37087107 -49590441 + (GA)n Simple_repeat Simple_repeat 2 126 0 1571 188 98 87 chr18 37087134 37087571 -49589977 + LTR8 LTR ERV1 248 689 -2 2768 171 7 62 chr18 37087573 37088135 -49589413 - MER4E LTR ERV1 -100 679 149 1046 221 99 49 chr18 37088268 37088563 -49588985 + LTR10B LTR ERV1 252 547 0 27207 263 37 27 chr18 37088563 37096272 -49581276 + HERVI LTR ERV1 2 7784 -1 944 252 75 43 chr18 37096351 37096700 -49580848 + LTR10B LTR ERV1 188 547 0 591 110 0 0 chr18 37096700 37096780 -49580768 - MER4E LTR ERV1 -622 157 78 1315 161 9 18 chr18 37096782 37097005 -49580543 + LTR8 LTR ERV1 53 273 -418 29293 70 13 1 chr18 37097105 37100731 -49576817 + HERVL-A1 LTR ERVL 1987 5654 0 3271 59 2 5 chr18 37100731 37101136 -49576412 + MLT2A1 LTR ERVL 1 404 -40 360 86 0 35 chr18 37101168 37101226 -49576322 + MLT2A1 LTR ERVL 397 452 -1 464 63 0 0 chr18 37101806 37101869 -49575679 + MER61E LTR ERV1 1 63 -506 1519 176 178 66 chr18 37102023 37102523 -49575025 - MER52C LTR ERV1 -722 556 1 968 262 50 38 chr18 37102799 37103219 -49574329 + HAL1 LINE L1 1216 1640 -867 207 0 0 0 chr18 37103238 37103261 -49574287 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1584 111 5 0 chr18 37103263 37103471 -49574077 + AluSq SINE Alu 87 295 -18 1052 203 177 81 chr18 37103482 37104014 -49573534 - L1MC5 LINE L1 -50 7911 7329 1517 211 142 26 chr18 37104023 37104517 -49573031 + HAL1 LINE L1 1667 2217 -290 2189 117 3 3 chr18 37104663 37104961 -49572587 + AluSq SINE Alu 1 298 -15 1504 192 113 42 chr18 37104978 37105358 -49572190 + MLT1D LTR MaLR 1 407 -98 997 122 0 0 chr18 37105362 37105501 -49572047 + FLAM_C SINE Alu 5 143 0 1944 165 33 41 chr18 37105651 37106079 -49571469 + LTR8 LTR ERV1 307 691 0 540 253 51 74 chr18 37106126 37106383 -49571165 + LTR38 LTR ERV1 149 399 -157 22 0 0 0 chr18 37108226 37108248 -49569300 + AT_rich Low_complexity Low_complexity 1 22 0 1471 119 5 9 chr18 37108251 37108461 -49569087 + AluSp SINE Alu 5 213 -100 7894 94 7 58 chr18 37108562 37109791 -49567757 - HERVH LTR ERV1 -5140 2573 1408 220 355 57 24 chr18 37110216 37110340 -49567208 - L2 LINE L2 -1 3271 3144 1468 153 34 21 chr18 37110635 37110924 -49566624 + LTR19A LTR ERV1 1 407 -79 42378 46 1 2 chr18 37160927 37166863 -49510685 + L1PA4 LINE L1 221 6154 -1 7679 32 0 0 chr18 37169376 37170358 -49507190 - L1PA5 LINE L1 -5 6149 5169 2220 115 0 0 chr18 37171495 37171807 -49505741 - AluSx SINE Alu 0 312 1 194 214 357 0 chr18 37171843 37171899 -49505649 - L2 LINE L2 -4 3268 3193 23 0 0 0 chr18 37172869 37172892 -49504656 + AT_rich Low_complexity Low_complexity 1 23 0 231 170 0 0 chr18 37172978 37173025 -49504523 + G-rich Low_complexity Low_complexity 1 47 0 925 169 7 7 chr18 37173136 37173290 -49504258 + AluJb SINE Alu 146 299 -13 1823 173 0 7 chr18 37173292 37173598 -49503950 + AluJo SINE Alu 1 304 -8 353 343 29 7 chr18 37173662 37173799 -49503749 + MIR SINE MIR 5 144 -118 198 243 0 0 chr18 37174006 37174043 -49503505 - L2 LINE L2 -43 3270 3234 294 312 46 0 chr18 37174195 37174304 -49503244 + MIR SINE MIR 79 192 -70 1803 166 26 49 chr18 37174373 37174717 -49502831 + MLT1A1 LTR MaLR 30 365 0 1146 160 5 11 chr18 37176073 37176260 -49501288 - AluJo SINE Alu -5 307 122 847 178 0 0 chr18 37176295 37176424 -49501124 - AluJo SINE Alu -179 133 5 951 107 23 73 chr18 37176424 37176572 -49500976 + L1MA6 LINE L1 6130 6269 -31 2305 99 0 3 chr18 37176572 37176876 -49500672 - AluSg SINE Alu -7 303 1 951 107 23 73 chr18 37176876 37176904 -49500644 + L1MA6 LINE L1 6269 6297 -3 201 259 161 0 chr18 37177295 37177376 -49500172 + L2 LINE L2 3146 3239 -33 1286 131 25 34 chr18 37177623 37177860 -49499688 + L1MB7 LINE L1 5022 5256 -890 2193 109 0 19 chr18 37177885 37178198 -49499350 - AluSc SINE Alu -2 307 1 332 194 14 28 chr18 37178199 37178271 -49499277 + Tigger5 DNA MER2_type 2253 2323 0 3203 164 96 28 chr18 37178278 37179090 -49498458 + L1MB7 LINE L1 5244 6168 -16 501 279 84 59 chr18 37180335 37180658 -49496890 - L1MC4 LINE L1 -1013 7029 6699 1814 126 20 40 chr18 37180791 37181092 -49496456 + AluSx SINE Alu 1 295 -17 642 307 55 5 chr18 37181124 37181342 -49496206 + MIR SINE MIR 3 231 -31 2270 124 124 8 chr18 37181523 37181917 -49495631 + MER31B LTR ERV1 27 466 0 2196 113 0 3 chr18 37182211 37182502 -49495046 + AluSx SINE Alu 1 290 -22 747 102 159 3 chr18 37182806 37182949 -49494599 + L1PA10 LINE L1 6007 6166 -8 778 177 22 77 chr18 37183080 37183261 -49494287 - MER5A DNA MER1_type 0 189 19 2469 152 36 23 chr18 37183371 37183846 -49493702 + L1MB3 LINE L1 5660 6140 -43 2091 122 3 3 chr18 37183874 37184169 -49493379 - AluSx SINE Alu -17 295 1 874 219 12 12 chr18 37185005 37185169 -49492379 + FRAM SINE Alu 6 169 -7 448 271 121 24 chr18 37185986 37186152 -49491396 - MIR SINE MIR -48 214 33 4240 164 30 25 chr18 37187511 37188317 -49489231 - L1MD2 LINE L1 -1 6358 5549 1535 154 71 4 chr18 37188355 37188622 -49488926 + AluJb SINE Alu 1 285 -27 315 0 0 0 chr18 37188622 37188657 -49488891 + (CA)n Simple_repeat Simple_repeat 2 36 0 3402 201 99 81 chr18 37189055 37190169 -49487379 + MER69B DNA AcHobo 27 1160 -66 767 205 171 0 chr18 37190463 37190673 -49486875 - MLT1D LTR MaLR -259 246 1 336 193 80 34 chr18 37190679 37190767 -49486781 + MIR3 SINE MIR 76 167 -41 1982 120 30 7 chr18 37191005 37191304 -49486244 - AluSx SINE Alu -6 306 1 2118 258 113 19 chr18 37192187 37193193 -49484355 - L2 LINE L2 0 3313 2196 1186 225 55 26 chr18 37193197 37193544 -49484004 + L1M4 LINE L1 4805 5161 -985 369 162 0 14 chr18 37193544 37193618 -49483930 - L2 LINE L2 -1111 2203 2131 1438 284 90 31 chr18 37193664 37194341 -49483207 - L2 LINE L2 -1044 2270 1554 679 202 39 28 chr18 37194843 37195021 -49482527 + L1MB8 LINE L1 5957 6136 -42 2247 84 0 0 chr18 37195022 37195296 -49482252 + AluSc SINE Alu 1 274 -35 234 198 171 54 chr18 37196352 37196409 -49481139 + MIR3 SINE MIR 13 62 -146 4871 124 70 8 chr18 37196409 37197143 -49480405 - MER4E LTR ERV1 0 779 1 234 198 171 54 chr18 37197143 37197196 -49480352 + MIR3 SINE MIR 62 136 -72 457 220 110 0 chr18 37198201 37198310 -49479238 + MER63 DNA MER1_type 5 751 -85 1473 62 0 0 chr18 37199465 37199643 -49477905 - AluY SINE Alu -4 307 130 2009 115 20 0 chr18 37200269 37200564 -49476984 + AluSx SINE Alu 1 301 -11 670 310 107 11 chr18 37200651 37201055 -49476493 - L1MD1 LINE L1 -404 5838 5384 234 235 49 37 chr18 37201490 37201571 -49475977 + L2 LINE L2 3189 3270 -2 1882 164 0 3 chr18 37201604 37201903 -49475645 + AluJo SINE Alu 5 302 -10 374 122 41 0 chr18 37201936 37202034 -49475514 + (TG)n Simple_repeat Simple_repeat 2 103 0 51 31 0 0 chr18 37203242 37203307 -49474241 + AT_rich Low_complexity Low_complexity 1 65 0 707 208 171 23 chr18 37203307 37203624 -49473924 - L1ME3A LINE L1 -11 6159 5776 1550 190 76 103 chr18 37203624 37204379 -49473169 + LTR1B LTR ERV1 2 826 0 729 234 54 5 chr18 37204379 37204584 -49472964 - L1ME3A LINE L1 -393 5769 5555 21 0 0 0 chr18 37204788 37204809 -49472739 + AT_rich Low_complexity Low_complexity 1 21 0 779 296 51 35 chr18 37204869 37205460 -49472088 + L1M4 LINE L1 4056 4655 -1491 1263 179 7 68 chr18 37205463 37205542 -49472006 + L1MB8 LINE L1 5888 5970 -208 2036 160 0 0 chr18 37205542 37205848 -49471700 + AluSx SINE Alu 1 306 -6 1263 179 7 68 chr18 37205848 37206076 -49471472 + L1MB8 LINE L1 5970 6176 -2 1149 115 13 0 chr18 37206218 37206374 -49471174 + AluSx SINE Alu 11 168 -144 557 298 78 24 chr18 37206474 37206971 -49470577 + L1M4 LINE L1 4682 5205 -941 1732 242 42 104 chr18 37206978 37207532 -49470016 + L1ME LINE L1 476 942 -5588 1800 182 3 0 chr18 37207532 37207823 -49469725 - AluJo SINE Alu -20 292 1 1732 242 42 104 chr18 37207823 37208264 -49469284 + L1ME LINE L1 942 1409 -5121 539 281 44 41 chr18 37208383 37208441 -49469107 + L1ME LINE L1 1705 1761 -4779 1734 201 0 0 chr18 37208441 37208734 -49468814 + AluJb SINE Alu 3 295 -17 539 281 44 41 chr18 37208734 37208970 -49468578 + L1ME LINE L1 1761 2000 -4540 2607 276 116 12 chr18 37208976 37210662 -49466886 + L1M4 LINE L1 3133 5030 -1116 2030 162 14 37 chr18 37210662 37210809 -49466739 + MER44D DNA MER2_type 2 151 -2336 1948 163 0 0 chr18 37210809 37211098 -49466450 - AluJb SINE Alu -23 289 1 2030 162 14 37 chr18 37211098 37211429 -49466119 + MER44D DNA MER2_type 151 491 -114 189 0 0 0 chr18 37211568 37211589 -49465959 + (A)n Simple_repeat Simple_repeat 1 21 0 6558 201 3 21 chr18 37211589 37213015 -49464533 + L1 LINE L1 3742 5142 -1004 240 257 14 0 chr18 37213015 37213085 -49464463 + MER52A LTR ERV1 1 71 -1684 180 158 0 0 chr18 37213086 37213124 -49464424 + (CAG)n Simple_repeat Simple_repeat 2 39 0 6001 181 41 26 chr18 37213561 37214658 -49462890 + MER52A LTR ERV1 643 1755 0 359 127 0 0 chr18 37214658 37214713 -49462835 + L1P LINE L1 5139 5193 -953 2061 138 13 10 chr18 37214714 37215025 -49462523 + AluSx SINE Alu 1 312 0 231 36 0 0 chr18 37215288 37215316 -49462232 + (A)n Simple_repeat Simple_repeat 1 28 0 450 225 93 26 chr18 37216029 37216180 -49461368 - L1ME3 LINE L1 0 6162 6002 284 202 110 37 chr18 37216187 37216296 -49461252 + MER113 DNA MER1_type? 1 117 -404 2207 98 17 0 chr18 37216386 37216682 -49460866 + AluSq SINE Alu 1 301 -12 183 323 31 71 chr18 37217533 37217660 -49459888 + MIR SINE MIR 30 151 -111 549 264 145 31 chr18 37218947 37219174 -49458374 - MIR SINE MIR -3 259 7 1911 202 92 23 chr18 37220160 37220725 -49456823 - L1MCa LINE L1 -4634 1930 1217 755 151 42 0 chr18 37220725 37220844 -49456704 - AluJb SINE Alu -13 299 176 1386 232 85 0 chr18 37220866 37221220 -49456328 - L1MCa LINE L1 -4860 1185 802 689 319 145 15 chr18 37221276 37221746 -49455802 - L3 LINE CR1 -230 1347 817 238 268 70 14 chr18 37221779 37221850 -49455698 - L3 LINE CR1 -741 836 762 982 201 0 0 chr18 37222099 37222268 -49455280 - AluJb SINE Alu -3 309 141 207 0 0 0 chr18 37222310 37222333 -49455215 + (T)n Simple_repeat Simple_repeat 1 23 0 2039 110 0 7 chr18 37222447 37222764 -49454784 + AluSx SINE Alu 6 320 0 406 184 0 0 chr18 37222777 37222853 -49454695 + L1MB5 LINE L1 5799 5874 -300 740 208 29 52 chr18 37222856 37223029 -49454519 + AluJo SINE Alu 6 174 -138 628 111 0 0 chr18 37223029 37223110 -49454438 - AluJ/FLAM SINE Alu -230 82 2 1845 179 3 6 chr18 37223145 37223458 -49454090 + AluJb SINE Alu 1 312 0 294 73 0 0 chr18 37223633 37223674 -49453874 + (A)n Simple_repeat Simple_repeat 1 41 0 2081 142 3 0 chr18 37223857 37224152 -49453396 - AluSx SINE Alu -16 296 1 440 256 8 24 chr18 37224267 37224392 -49453156 + MER110-int LTR ERV1 4183 4305 -342 625 299 11 26 chr18 37224667 37225021 -49452527 + MER90 LTR ERV1 42 430 -145 469 253 47 40 chr18 37225200 37225350 -49452198 + MER90 LTR ERV1 417 567 -8 1840 167 0 0 chr18 37225376 37225663 -49451885 - AluJo SINE Alu -25 287 1 1772 169 3 13 chr18 37225773 37226081 -49451467 - AluJb SINE Alu -2 310 6 2092 131 0 3 chr18 37226454 37226745 -49450803 + AluSx SINE Alu 13 302 -10 1604 159 130 0 chr18 37226788 37227117 -49450431 + Tigger3b DNA MER2_type 6 377 -854 755 270 25 24 chr18 37227227 37227518 -49450030 + MER101 LTR ERV1 222 459 -15 1097 117 37 0 chr18 37227539 37227701 -49449847 + Tigger3b DNA MER2_type 375 542 -690 421 47 31 0 chr18 37227701 37227765 -49449783 + (TTTA)n Simple_repeat Simple_repeat 3 68 0 6159 77 20 1 chr18 37227765 37228547 -49449001 - SVA Other Other -23 1363 567 2397 80 10 0 chr18 37228690 37228990 -49448558 - AluSp SINE Alu -10 303 1 2100 217 37 34 chr18 37228990 37229556 -49447992 + L1M4 LINE L1 3723 4290 -1856 2024 88 0 15 chr18 37229563 37229826 -49447722 - AluSx SINE Alu -49 263 5 378 193 84 50 chr18 37229871 37229978 -49447570 - Charlie1 DNA MER1_type -1122 1639 1529 419 227 0 62 chr18 37229978 37230075 -49447473 - Tigger2a DNA MER2_type 0 444 354 239 217 188 0 chr18 37230076 37230145 -49447403 - Tigger2a DNA MER2_type -333 101 20 2879 153 25 21 chr18 37230146 37230675 -49446873 - L1MB3 LINE L1 -234 5949 5419 936 144 135 10 chr18 37230672 37230880 -49446668 + L1MB3 LINE L1 5950 6183 0 * 594 184 20 0 chr18 37230881 37230979 -49446569 - AluJb SINE Alu -31 281 182 324 210 111 12 chr18 37231003 37231084 -49446464 - Charlie1 DNA MER1_type -1232 1529 1441 615 179 57 18 chr18 37231104 37231286 -49446262 + L1M4 LINE L1 5228 5415 -743 1100 140 0 50 chr18 37231286 37231465 -49446083 - AluJb SINE Alu -137 175 6 210 71 0 0 chr18 37231474 37231502 -49446046 + (T)n Simple_repeat Simple_repeat 1 28 0 275 165 71 71 chr18 37231502 37231578 -49445970 - Charlie1a DNA MER1_type -1157 298 223 491 242 0 0 chr18 37231578 37231669 -49445879 - Tigger2a DNA MER2_type 0 444 354 376 193 148 0 chr18 37231670 37231758 -49445790 - Tigger2a DNA MER2_type -333 101 1 726 251 49 49 chr18 37231758 37231981 -49445567 - Charlie1a DNA MER1_type -1232 223 1 196 239 43 0 chr18 37232217 37232263 -49445285 - L2 LINE L2 -4 3309 3262 2819 186 218 16 chr18 37232377 37233226 -49444322 + L1M4 LINE L1 1123 2142 -4242 2008 125 0 4 chr18 37233246 37233525 -49444023 - AluSg SINE Alu -32 278 1 36 40 0 0 chr18 37233551 37233601 -49443947 + AT_rich Low_complexity Low_complexity 1 50 0 2702 200 45 13 chr18 37233792 37234347 -49443201 - L1MB5 LINE L1 0 6174 5602 2047 109 7 7 chr18 37234835 37235145 -49442403 + AluSx SINE Alu 1 310 0 1749 197 26 119 chr18 37235181 37235750 -49441798 - MLT2B1 LTR ERVL -4 516 1 305 265 118 67 chr18 37236271 37236584 -49440964 + L1MC/D LINE L1 4588 4916 -1230 21 0 0 0 chr18 37236673 37236694 -49440854 + AT_rich Low_complexity Low_complexity 1 21 0 289 242 44 0 chr18 37236700 37236791 -49440757 + L1MC/D LINE L1 5712 5806 -2002 2335 103 0 3 chr18 37236913 37237214 -49440334 - AluSx SINE Alu -12 300 1 844 139 0 0 chr18 37237573 37237702 -49439846 + FLAM_C SINE Alu 15 143 0 882 187 20 0 chr18 37237829 37237979 -49439569 + FRAM SINE Alu 5 157 -9 620 154 46 63 chr18 37237980 37238155 -49439393 + L1MDa LINE L1 1021 1192 -5348 1081 154 69 27 chr18 37238155 37238375 -49439173 + AluJo SINE Alu 87 314 0 2384 241 39 22 chr18 37238420 37239191 -49438357 + L1M4 LINE L1 3182 3965 -2417 180 0 0 0 chr18 37239199 37239219 -49438329 + (T)n Simple_repeat Simple_repeat 1 20 0 22 0 0 0 chr18 37239350 37239372 -49438176 + AT_rich Low_complexity Low_complexity 1 22 0 842 188 80 0 chr18 37239372 37239548 -49438000 + AluJb SINE Alu 120 309 -3 204 40 0 0 chr18 37239561 37239586 -49437962 + (CA)n Simple_repeat Simple_repeat 1 25 0 1932 143 7 19 chr18 37239633 37239941 -49437607 + AluJb SINE Alu 3 306 -6 200 380 144 19 chr18 37240130 37240338 -49437210 + L2 LINE L2 3038 3271 -1 1836 148 3 14 chr18 37240361 37240652 -49436896 - AluJb SINE Alu -24 288 1 1623 176 60 95 chr18 37241033 37241331 -49436217 + Charlie1b DNA MER1_type 20 327 -2434 635 153 17 8 chr18 37241331 37241449 -49436099 + L1MA6 LINE L1 6172 6290 -10 1623 176 60 95 chr18 37241449 37241465 -49436083 + Charlie1b DNA MER1_type 327 342 -2419 1790 148 54 0 chr18 37241465 37241743 -49435805 - AluSx SINE Alu -19 293 1 1623 176 60 95 chr18 37241743 37241943 -49435605 + Charlie1b DNA MER1_type 342 517 -6 505 230 73 0 chr18 37241987 37242191 -49435357 + L1MC5 LINE L1 7452 7670 -291 2400 75 0 10 chr18 37242455 37242760 -49434788 + AluY SINE Alu 1 302 -9 893 146 0 8 chr18 37243153 37243283 -49434265 + FLAM_A SINE Alu 1 129 -4 205 211 33 100 chr18 37243523 37243613 -49433935 + L2 LINE L2 3162 3245 -68 1424 158 105 0 chr18 37243979 37244329 -49433219 + L1M4 LINE L1 5171 5551 -627 2915 6 0 0 chr18 37244341 37244653 -49432895 + AluYb8 SINE Alu 1 312 -6 1989 178 90 0 chr18 37244802 37245167 -49432381 - MSTB LTR MaLR -28 398 1 246 241 55 90 chr18 37245829 37245974 -49431574 + MLT1K LTR MaLR 81 220 -368 1511 167 0 4 chr18 37246604 37246838 -49430710 + MER46A DNA MER2_type 1 233 -3 494 279 97 13 chr18 37247491 37247645 -49429903 - MIR SINE MIR -74 188 22 255 221 77 67 chr18 37247954 37248058 -49429490 + LTR16C LTR ERVL 385 489 -2 1488 210 188 16 chr18 37249001 37249449 -49428099 - LTR50 LTR ERVL -270 525 1 324 0 0 0 chr18 37250148 37250184 -49427364 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 2150 100 0 14 chr18 37250187 37250477 -49427071 - AluSg SINE Alu -24 286 1 2172 116 0 35 chr18 37250637 37250955 -49426593 + AluSx SINE Alu 1 307 -5 338 128 43 0 chr18 37252346 37252440 -49425108 + (CA)n Simple_repeat Simple_repeat 2 99 0 1857 168 0 3 chr18 37252473 37252771 -49424777 - AluJo SINE Alu -11 301 5 234 235 49 37 chr18 37252804 37252885 -49424663 - L2 LINE L2 -2 3270 3189 762 269 123 47 chr18 37253320 37253724 -49423824 + L1ME LINE L1 5384 5838 -324 2336 110 0 0 chr18 37253811 37254111 -49423437 - AluSx SINE Alu -12 300 1 871 219 12 12 chr18 37254947 37255111 -49422437 + FRAM SINE Alu 6 169 -7 448 271 121 24 chr18 37255928 37256094 -49421454 - MIR SINE MIR -48 214 33 272 305 188 8 chr18 37256837 37256965 -49420583 - MLT1H LTR MaLR -103 452 302 1542 167 32 0 chr18 37257018 37257264 -49420284 + AluJb SINE Alu 1 254 -58 572 206 66 92 chr18 37257281 37257498 -49420050 - MLT1H LTR MaLR -278 271 1 748 259 23 72 chr18 37257535 37257798 -49419750 + MLT1J LTR MaLR 231 480 -31 2253 90 0 7 chr18 37258378 37258667 -49418881 - AluSc SINE Alu -22 287 1 790 72 0 0 chr18 37259097 37259194 -49418354 + AluSg/x SINE Alu 195 291 -18 310 274 206 58 chr18 37259919 37260196 -49417352 + L1MB2 LINE L1 1089 1406 -5443 972 138 0 72 chr18 37260871 37261038 -49416510 + AluSx SINE Alu 1 155 -157 215 31 31 0 chr18 37261068 37261100 -49416448 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 343 278 78 62 chr18 37261100 37261351 -49416197 + L1ME2 LINE L1 65 326 -5744 2136 118 7 3 chr18 37261351 37261655 -49415893 + AluSx SINE Alu 1 305 -7 343 278 78 62 chr18 37261655 37261697 -49415851 + L1ME2 LINE L1 326 366 -5704 2178 199 134 42 chr18 37261708 37262276 -49415272 - MLT1E2 LTR MaLR -4 622 3 879 118 47 0 chr18 37262337 37262464 -49415084 + AluSq/x SINE Alu 1 133 -180 2063 133 0 3 chr18 37262468 37262768 -49414780 + AluSx SINE Alu 1 299 -13 4592 170 10 30 chr18 37262769 37263434 -49414114 + L1MB2 LINE L1 2841 3518 -3355 1647 111 161 19 chr18 37263434 37263695 -49413853 + AluSx SINE Alu 2 299 -3 4592 170 10 30 chr18 37263695 37264029 -49413519 + L1MB2 LINE L1 3518 6856 -17 830 226 48 41 chr18 37264085 37264399 -49413149 + L1ME2 LINE L1 2249 2564 -3516 731 213 82 16 chr18 37264417 37264449 -49413099 + MER58B DNA MER1_type 146 174 -2246 2313 97 0 0 chr18 37264449 37264739 -49412809 + AluSg SINE Alu 1 290 -20 731 213 82 16 chr18 37264739 37264889 -49412659 + MER58B DNA MER1_type 174 340 -1 2521 232 29 0 chr18 37264889 37265545 -49412003 + L1ME2 LINE L1 2554 3228 -2852 277 250 24 32 chr18 37265539 37265663 -49411885 - L1MDa LINE L1 -4019 2521 2399 * 30 45 0 0 chr18 37265665 37265709 -49411839 + AT_rich Low_complexity Low_complexity 1 44 0 3775 214 73 40 chr18 37265709 37266537 -49411011 - L1MDa LINE L1 -4115 2425 1541 1930 135 18 0 chr18 37266537 37266818 -49410730 - AluSx SINE Alu -26 286 1 3775 214 73 40 chr18 37266818 37267223 -49410325 - L1MDa LINE L1 -4999 1541 1151 894 240 74 50 chr18 37267222 37267559 -49409989 + L1ME2 LINE L1 3786 4130 -1950 * 780 187 18 3 chr18 37267559 37267843 -49409705 + GA-rich Low_complexity Low_complexity 1 288 0 2988 202 114 73 chr18 37267848 37268526 -49409022 + L1ME2 LINE L1 4086 4734 -1364 2239 55 44 0 chr18 37268526 37268799 -49408749 + AluYa5 SINE Alu 12 296 -15 2988 202 114 73 chr18 37268799 37269407 -49408141 + L1ME2 LINE L1 4734 5423 -675 1101 158 0 0 chr18 37269408 37269579 -49407969 + AluJb SINE Alu 134 304 -8 2250 201 29 87 chr18 37269582 37270299 -49407249 + L1ME2 LINE L1 5413 6088 -10 369 241 21 55 chr18 37270329 37270474 -49407074 + L1MC5 LINE L1 7790 7929 -32 695 215 80 88 chr18 37270502 37270655 -49406893 - L1MC5 LINE L1 -117 7844 7691 1583 198 7 3 chr18 37270655 37270943 -49406605 + AluJo SINE Alu 1 289 -23 695 215 80 88 chr18 37270943 37270956 -49406592 - L1MC5 LINE L1 -270 7691 7679 207 0 0 0 chr18 37270956 37270979 -49406569 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 695 215 80 88 chr18 37270979 37271150 -49406398 - L1MC5 LINE L1 -282 7679 7509 1701 186 0 24 chr18 37271166 37271456 -49406092 - AluJb SINE Alu -27 285 3 186 43 0 0 chr18 37271582 37271605 -49405943 + (TA)n Simple_repeat Simple_repeat 1 23 0 2689 49 0 0 chr18 37271767 37272074 -49405474 - AluY SINE Alu -4 307 1 14610 156 32 9 chr18 37272074 37276430 -49401118 - L1PBa LINE L1 -2390 4472 3 690 143 109 0 chr18 37276439 37276586 -49400962 - Tigger3(Golem) DNA MER2_type -539 2490 2328 5682 59 20 62 chr18 37276592 37277437 -49400111 + SVA Other Other 1 810 -576 828 110 102 0 chr18 37277548 37277675 -49399873 - FLAM_C SINE Alu -1 142 3 1877 164 7 0 chr18 37277806 37278099 -49399449 - AluJo SINE Alu -17 295 1 1574 137 0 0 chr18 37278247 37278474 -49399074 + AluSg/x SINE Alu 81 307 -5 2451 76 0 0 chr18 37278566 37278870 -49398678 + AluY SINE Alu 1 304 -7 350 248 106 14 chr18 37278901 37279042 -49398506 + L1ME4a LINE L1 5964 6117 -4 449 247 73 13 chr18 37279540 37279690 -49397858 + MIR SINE MIR 104 262 0 1480 160 37 57 chr18 37279742 37280042 -49397506 - AluJo SINE Alu -18 294 1 225 204 0 19 chr18 37280545 37280599 -49396949 + T-rich Low_complexity Low_complexity 3 55 0 351 345 62 7 chr18 37280719 37280864 -49396684 + Tigger8 DNA MER2_type 29 181 -485 2428 76 0 0 chr18 37281204 37281505 -49396043 + AluSg SINE Alu 1 301 -9 490 254 67 8 chr18 37281513 37281647 -49395901 + FLAM_A SINE Alu 1 142 0 1643 191 11 4 chr18 37281842 37282119 -49395429 + AluJo SINE Alu 1 279 -33 1056 174 42 0 chr18 37283238 37283428 -49394120 + MER3 DNA MER1_type 12 209 0 1710 156 0 87 chr18 37283732 37284066 -49393482 + AluJo SINE Alu 1 305 -7 778 270 109 0 chr18 37284673 37284884 -49392664 - MIR SINE MIR -22 240 7 31 26 0 0 chr18 37284980 37285018 -49392530 + AT_rich Low_complexity Low_complexity 1 38 0 947 238 26 35 chr18 37285375 37285602 -49391946 + Tigger7 DNA MER2_type 5 229 -321 1829 167 118 47 chr18 37285633 37286222 -49391326 + Tigger3b DNA MER2_type 1 1228 -3 444 209 0 12 chr18 37286232 37286318 -49391230 + Tigger7 DNA MER2_type 2407 2491 0 23 33 0 0 chr18 37287240 37287270 -49390278 + AT_rich Low_complexity Low_complexity 1 30 0 211 299 0 0 chr18 37287594 37287661 -49389887 + (TA)n Simple_repeat Simple_repeat 1 67 0 255 330 85 75 chr18 37287737 37287925 -49389623 + L3 LINE CR1 1368 1557 -20 1944 157 29 34 chr18 37287937 37288003 -49389545 + L1M3 LINE L1 5256 5321 -834 2391 54 0 17 chr18 37288003 37288323 -49389225 + AluY SINE Alu 1 311 0 1944 157 29 34 chr18 37288323 37288692 -49388856 + L1M3 LINE L1 5321 5692 -463 402 147 0 0 chr18 37288692 37288760 -49388788 + (CA)n Simple_repeat Simple_repeat 2 69 0 2128 112 3 7 chr18 37288977 37289282 -49388266 - AluSx SINE Alu -8 304 1 1330 174 9 104 chr18 37289311 37289639 -49387909 + AluJo SINE Alu 1 297 -15 2897 155 48 22 chr18 37289660 37290467 -49387081 + L1MB5 LINE L1 5258 6153 -21 1049 147 26 52 chr18 37290584 37290677 -49386871 - L1MC5 LINE L1 -491 7470 7376 2333 113 17 46 chr18 37290677 37291022 -49386526 + MER1B DNA MER1_type 2 336 -1 1049 147 26 52 chr18 37291022 37291159 -49386389 - L1MC5 LINE L1 -585 7376 7246 189 107 0 0 chr18 37291649 37291677 -49385871 + (A)n Simple_repeat Simple_repeat 1 28 0 469 266 69 23 chr18 37291694 37291867 -49385681 + MLT1J LTR MaLR 239 419 -92 401 165 18 18 chr18 37291872 37291981 -49385567 + CT-rich Low_complexity Low_complexity 3 111 0 2203 110 3 3 chr18 37291987 37292286 -49385262 - AluSp SINE Alu -14 299 1 2236 58 0 28 chr18 37292562 37292903 -49384645 + AluY SINE Alu 1 333 0 237 98 0 0 chr18 37292922 37292963 -49384585 + (A)n Simple_repeat Simple_repeat 1 41 0 429 224 80 24 chr18 37292983 37293108 -49384440 + L1MC5 LINE L1 7782 7913 -48 2175 124 3 0 chr18 37293795 37294200 -49383348 - AluSx SINE Alu 0 406 1 639 167 123 0 chr18 37294236 37294350 -49383198 + FLAM_A SINE Alu 1 128 -5 337 290 56 19 chr18 37294678 37294785 -49382763 - MIR3 SINE MIR -51 157 47 359 295 87 25 chr18 37295080 37295242 -49382306 + MIR SINE MIR 3 171 -62 445 289 157 45 chr18 37295261 37295800 -49381748 - L2 LINE L2 0 3313 2836 1765 177 0 3 chr18 37295800 37296100 -49381448 - AluJb SINE Alu -13 299 1 445 289 157 45 chr18 37296100 37296148 -49381400 - L2 LINE L2 -477 2836 2795 2967 163 65 93 chr18 37296148 37296389 -49381159 - LTR8 LTR ERV1 0 691 445 2001 122 39 7 chr18 37296389 37296675 -49380873 + AluSx SINE Alu 1 295 -17 2967 163 65 93 chr18 37296675 37297144 -49380404 - LTR8 LTR ERV1 -246 445 1 445 289 157 45 chr18 37297144 37297323 -49380225 - L2 LINE L2 -518 2795 2474 2757 95 62 5 chr18 37297324 37297713 -49379835 + MER9 LTR ERVK 69 479 -32 458 181 19 19 chr18 37297849 37297954 -49379594 + MIR SINE MIR 158 262 0 2186 121 0 0 chr18 37298127 37298425 -49379123 + AluSc SINE Alu 1 298 -11 290 299 110 8 chr18 37298747 37298874 -49378674 + L1MC/D LINE L1 5519 5658 -2150 25 0 0 0 chr18 37298950 37298975 -49378573 + AT_rich Low_complexity Low_complexity 1 25 0 2280 205 110 32 chr18 37300367 37300952 -49376596 + L2 LINE L2 1917 2558 -756 1828 98 4 8 chr18 37300952 37301206 -49376342 + AluSx SINE Alu 1 253 -59 2280 205 110 32 chr18 37301206 37301268 -49376280 + L2 LINE L2 2558 2614 -700 744 239 281 28 chr18 37301269 37301709 -49375839 + L2 LINE L2 2770 3309 -4 196 311 89 0 chr18 37301759 37301804 -49375744 + L2 LINE L2 3238 3286 -27 284 189 81 40 chr18 37301913 37301987 -49375561 - L2 LINE L2 -744 2570 2494 279 311 56 0 chr18 37302867 37302957 -49374591 - L2 LINE L2 -1 3312 3218 214 74 0 0 chr18 37303373 37303400 -49374148 - L2 LINE L2 -98 3215 3189 252 0 0 0 chr18 37303452 37303480 -49374068 + (T)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr18 37303507 37303527 -49374021 + (G)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr18 37303528 37303556 -49373992 + GC_rich Low_complexity Low_complexity 1 28 0 1489 61 0 0 chr18 37303687 37303867 -49373681 - AluY SINE Alu -2 309 130 2006 111 21 0 chr18 37304493 37304782 -49372766 + AluSx SINE Alu 1 295 -17 180 316 145 17 chr18 37304782 37304891 -49372657 + L2 LINE L2 3167 3293 -20 2069 95 32 3 chr18 37305886 37306170 -49371378 + AluSg SINE Alu 1 292 -18 191 152 130 0 chr18 37306715 37306761 -49370787 + MIR SINE MIR 156 207 -55 198 192 0 0 chr18 37306771 37306823 -49370725 + (TA)n Simple_repeat Simple_repeat 2 53 0 2897 145 124 2 chr18 37307123 37307681 -49369867 + L1MA7 LINE L1 5514 6139 -152 225 0 0 0 chr18 37307687 37307712 -49369836 + (T)n Simple_repeat Simple_repeat 1 25 0 1146 160 5 11 chr18 37307897 37308084 -49369464 - AluJo SINE Alu -5 307 122 847 178 0 0 chr18 37308119 37308248 -49369300 - AluJo SINE Alu -179 133 5 951 107 23 73 chr18 37308248 37308396 -49369152 + L1MA6 LINE L1 6130 6269 -31 2317 99 0 3 chr18 37308396 37308700 -49368848 - AluSg SINE Alu -7 303 1 951 107 23 73 chr18 37308700 37308728 -49368820 + L1MA6 LINE L1 6269 6297 -3 201 259 161 0 chr18 37309119 37309200 -49368348 + L2 LINE L2 3146 3239 -33 1286 131 25 34 chr18 37309447 37309684 -49367864 + L1MB7 LINE L1 5022 5256 -890 2180 112 0 19 chr18 37309709 37310022 -49367526 - AluSc SINE Alu -2 307 1 332 194 14 28 chr18 37310023 37310095 -49367453 + Tigger5 DNA MER2_type 2253 2323 0 3188 168 101 28 chr18 37310102 37310914 -49366634 + L1MB7 LINE L1 5244 6168 -16 501 279 84 59 chr18 37312159 37312482 -49365066 - L1MC4 LINE L1 -1013 7029 6699 1842 123 20 40 chr18 37312615 37312916 -49364632 + AluSx SINE Alu 1 295 -17 642 307 55 5 chr18 37312948 37313166 -49364382 + MIR SINE MIR 3 231 -31 2270 124 124 8 chr18 37313347 37313741 -49363807 + MER31B LTR ERV1 27 466 0 2196 113 0 3 chr18 37314035 37314326 -49363222 + AluSx SINE Alu 1 290 -22 747 102 159 3 chr18 37314630 37314773 -49362775 + L1PA10 LINE L1 6007 6166 -8 778 177 22 77 chr18 37314904 37315085 -49362463 - MER5A DNA MER1_type 0 189 19 2469 152 36 23 chr18 37315195 37315670 -49361878 + L1MB3 LINE L1 5660 6140 -43 2379 72 3 3 chr18 37315698 37315990 -49361558 - AluSp SINE Alu -17 296 5 364 296 193 27 chr18 37316201 37316424 -49361124 + MIR SINE MIR 3 262 0 492 271 8 8 chr18 37316461 37316583 -49360965 + MER5A DNA MER1_type 4 125 -64 914 181 36 57 chr18 37317064 37317212 -49360336 + MER5A DNA MER1_type 1 146 -43 1160 122 206 0 chr18 37317212 37317401 -49360147 + MER30 DNA MER1_type 1 228 -2 914 181 36 57 chr18 37317401 37317445 -49360103 + MER5A DNA MER1_type 146 189 0 280 219 94 10 chr18 37321305 37321401 -49356147 + Charlie4 DNA MER1_type 6 109 -1852 1274 291 59 22 chr18 37321401 37321940 -49355608 + L1M4b LINE L1 160 718 -6141 279 296 216 20 chr18 37322220 37322521 -49355027 - L2 LINE L2 -778 2536 2177 2394 92 0 13 chr18 37323011 37323326 -49354222 - AluSp SINE Alu -2 311 1 240 295 0 0 chr18 37323418 37323479 -49354069 + MLT1F1 LTR MaLR 64 124 -443 3076 149 72 2 chr18 37323480 37324032 -49353516 + L1MC3 LINE L1 7189 7779 -6 290 244 111 11 chr18 37324076 37324166 -49353382 - MIR SINE MIR -47 215 117 279 196 0 0 chr18 37324183 37324234 -49353314 + U5 snRNA snRNA 1 51 -65 1863 161 13 13 chr18 37324454 37324765 -49352783 + AluJb SINE Alu 1 311 -1 1941 118 41 0 chr18 37325014 37325285 -49352263 - AluSx SINE Alu -30 282 1 2433 154 58 17 chr18 37325285 37325752 -49351796 + L1MB2 LINE L1 5673 6158 -13 2366 102 0 0 chr18 37326003 37326306 -49351242 - AluSp SINE Alu -10 303 1 1721 136 36 18 chr18 37326808 37327088 -49350460 + AluJb SINE Alu 2 286 -26 2470 60 0 0 chr18 37328057 37328356 -49349192 - AluY SINE Alu -12 299 1 469 312 85 62 chr18 37328377 37328886 -49348662 - L2 LINE L2 0 3313 2718 2532 66 0 0 chr18 37328886 37329190 -49348358 - AluY SINE Alu -7 304 1 469 312 85 62 chr18 37329190 37329347 -49348201 - L2 LINE L2 -595 2718 2566 259 241 130 0 chr18 37329408 37329516 -49348032 + HAL1 LINE L1 22 143 -2364 2093 122 0 0 chr18 37329541 37329829 -49347719 + AluSx SINE Alu 1 288 -24 997 185 87 20 chr18 37330417 37330612 -49346936 + AluJo SINE Alu 87 294 -18 10748 138 93 27 chr18 37330964 37331500 -49346048 + Tigger1 DNA MER2_type 1 500 -1918 1691 187 7 7 chr18 37331500 37331789 -49345759 + AluJb SINE Alu 1 289 -23 10748 138 93 27 chr18 37331789 37332464 -49345084 + Tigger1 DNA MER2_type 500 1129 -1289 1647 207 10 0 chr18 37332464 37332764 -49344784 + AluJo SINE Alu 1 303 -9 10748 138 93 27 chr18 37332764 37333737 -49343811 + Tigger1 DNA MER2_type 1129 2329 -89 1938 128 0 31 chr18 37333950 37334239 -49343309 - AluSx SINE Alu -32 280 1 763 198 146 16 chr18 37334937 37335129 -49342419 + MIR SINE MIR 15 231 -31 251 205 167 39 chr18 37337266 37337344 -49340204 - L2 LINE L2 -48 3224 3137 180 0 0 0 chr18 37339408 37339428 -49338120 + (A)n Simple_repeat Simple_repeat 1 20 0 2525 48 0 3 chr18 37339594 37339889 -49337659 - AluY SINE Alu -17 294 1 2155 116 7 0 chr18 37339986 37340278 -49337270 + AluSx SINE Alu 1 294 -18 219 69 0 0 chr18 37340883 37340912 -49336636 + (A)n Simple_repeat Simple_repeat 1 29 0 653 326 126 25 chr18 37341436 37342115 -49335433 + L2 LINE L2 2546 3305 -8 645 341 37 28 chr18 37342468 37342805 -49334743 - L2 LINE L2 -819 2495 2153 2365 107 7 0 chr18 37342805 37343113 -49334435 + AluSg SINE Alu 1 310 0 645 341 37 28 chr18 37343113 37343127 -49334421 - L2 LINE L2 -1161 2153 2141 232 384 12 0 chr18 37343281 37343367 -49334181 - L2 LINE L2 -682 2632 2546 219 69 0 0 chr18 37343891 37343920 -49333628 + (T)n Simple_repeat Simple_repeat 1 29 0 2041 137 7 0 chr18 37344524 37344816 -49332732 - AluSx SINE Alu -18 294 1 763 198 146 16 chr18 37345514 37345706 -49331842 + MIR SINE MIR 15 231 -31 224 203 165 51 chr18 37347838 37347917 -49329631 - L2 LINE L2 -48 3224 3137 21 0 0 0 chr18 37348095 37348116 -49329432 + GC_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr18 37348127 37348154 -49329394 + (A)n Simple_repeat Simple_repeat 1 27 0 399 268 183 36 chr18 37350134 37350358 -49327190 - MIR SINE MIR -3 259 3 1808 176 88 14 chr18 37350437 37350916 -49326632 + L1MB2 LINE L1 5651 6180 0 1710 138 91 4 chr18 37350923 37351199 -49326349 - AluJb SINE Alu -12 300 1 22 56 0 0 chr18 37351271 37351307 -49326241 + AT_rich Low_complexity Low_complexity 1 36 0 191 303 0 76 chr18 37351788 37351854 -49325694 - L2 LINE L2 -1 3271 3211 2352 127 36 3 chr18 37352017 37352380 -49325168 + THE1C LTR MaLR 1 375 0 9667 117 38 38 chr18 37352380 37353960 -49323588 + THE1C-int LTR MaLR 1 1580 0 479 114 25 13 chr18 37353960 37354039 -49323509 + THE1C LTR MaLR 1 80 -348 749 122 41 0 chr18 37354040 37354163 -49323385 + THE1C LTR MaLR 248 375 0 270 253 0 0 chr18 37354673 37354756 -49322792 + (CA)n Simple_repeat Simple_repeat 2 84 0 202 348 14 0 chr18 37355057 37355126 -49322422 - L2 LINE L2 0 3272 3203 24 67 0 0 chr18 37356003 37356048 -49321500 + AT_rich Low_complexity Low_complexity 1 45 0 213 292 60 107 chr18 37356957 37357173 -49320375 + L2 LINE L2 2977 3182 -90 531 253 158 72 chr18 37357542 37357961 -49319587 + L1MC5 LINE L1 5421 5875 -1933 384 211 123 26 chr18 37358537 37358651 -49318897 - MIR SINE MIR -16 246 122 2019 146 78 12 chr18 37358660 37359072 -49318476 - Tigger2 DNA MER2_type 0 2718 2280 399 174 0 0 chr18 37359070 37359139 -49318409 - Tigger2 DNA MER2_type -2649 69 1 * 261 227 110 104 chr18 37359165 37359231 -49318317 + L1MC5 LINE L1 6675 6739 -1222 2195 122 0 0 chr18 37359231 37359542 -49318006 + AluSx SINE Alu 1 311 -1 261 227 110 104 chr18 37359542 37359783 -49317765 + L1MC5 LINE L1 6739 6977 -984 2137 130 0 0 chr18 37359783 37360076 -49317472 + AluSx SINE Alu 1 293 -19 261 227 110 104 chr18 37360076 37360208 -49317340 + L1MC5 LINE L1 6977 7121 -840 699 253 69 6 chr18 37360208 37360382 -49317166 - MER5A DNA MER1_type -4 185 1 261 227 110 104 chr18 37360382 37360411 -49317137 + L1MC5 LINE L1 7121 7148 -813 233 232 32 32 chr18 37360442 37360537 -49317011 + L1MC5 LINE L1 7126 7220 -741 323 305 126 25 chr18 37360614 37360899 -49316649 + L1MC5 LINE L1 7384 7697 -264 1020 276 64 23 chr18 37360932 37361352 -49316196 + L1MDa LINE L1 337 742 -5798 698 194 0 15 chr18 37361373 37361507 -49316041 + FLAM_C SINE Alu 1 132 -1 207 0 0 0 chr18 37361648 37361671 -49315877 + (A)n Simple_repeat Simple_repeat 1 23 0 2047 190 63 55 chr18 37361673 37362278 -49315270 + L1MB8 LINE L1 5558 6167 -11 1606 174 59 0 chr18 37362503 37362790 -49314758 - AluJb SINE Alu -8 304 1 221 239 0 0 chr18 37363194 37363240 -49314308 + (CACCAT)n Simple_repeat Simple_repeat 4 49 0 633 219 69 40 chr18 37363395 37363669 -49313879 + pTR5 LTR ERV1 741 1022 -1416 4989 86 88 47 chr18 37363705 37364498 -49313050 + LTR12 LTR ERV1 1 826 0 341 275 70 16 chr18 37364582 37364773 -49312775 - L1ME3A LINE L1 -222 5948 5745 262 167 0 19 chr18 37364785 37364839 -49312709 - AluJb SINE Alu -169 133 81 296 260 175 41 chr18 37364841 37365110 -49312438 - L1ME3A LINE L1 -430 5736 5432 294 255 118 10 chr18 37365956 37366058 -49311490 - MIR3 SINE MIR -4 204 92 1724 101 85 22 chr18 37367213 37367530 -49310018 + L1MA2 LINE L1 5968 6304 0 22 0 0 0 chr18 37367533 37367555 -49309993 + AT_rich Low_complexity Low_complexity 1 22 0 878 193 12 6 chr18 37367795 37367956 -49309592 - FRAM SINE Alu -22 154 1 758 196 20 13 chr18 37368235 37368388 -49309160 - AluJb SINE Alu -22 290 137 1765 175 32 0 chr18 37368483 37368768 -49308780 + AluJb SINE Alu 1 294 -18 2256 104 0 7 chr18 37368773 37369081 -49308467 + AluSg SINE Alu 1 306 -4 1645 164 7 34 chr18 37369319 37369612 -49307936 - AluJb SINE Alu -18 294 10 2182 219 15 10 chr18 37370186 37370776 -49306772 + L1M4 LINE L1 4175 4767 -1379 329 85 0 0 chr18 37370783 37370830 -49306718 + Alu SINE Alu 1 47 -255 216 97 0 0 chr18 37370973 37371004 -49306544 + (A)n Simple_repeat Simple_repeat 1 31 0 5261 108 24 47 chr18 37371005 37371870 -49305678 + L1PB1 LINE L1 5175 6015 -136 2217 126 0 0 chr18 37371870 37372171 -49305377 + AluSx SINE Alu 6 306 -6 5261 108 24 47 chr18 37372171 37372298 -49305250 + L1PB1 LINE L1 6015 6143 -8 2697 128 83 36 chr18 37372310 37372789 -49304759 + Tigger3(Golem) DNA MER2_type 2475 2983 -45 1935 166 3 16 chr18 37372789 37373103 -49304445 - AluJb SINE Alu -2 310 1 2697 128 83 36 chr18 37373103 37373152 -49304396 + Tigger3(Golem) DNA MER2_type 2983 3028 0 2033 118 5 95 chr18 37373154 37373197 -49304351 + L1MB4 LINE L1 5787 5832 -348 2082 134 3 19 chr18 37373197 37373510 -49304038 + AluSx SINE Alu 1 308 -4 2033 118 5 95 chr18 37373510 37373849 -49303699 + L1MB4 LINE L1 5832 6128 -52 2099 126 0 16 chr18 37373849 37374158 -49303390 + AluSx SINE Alu 1 304 -8 2033 118 5 95 chr18 37374158 37374207 -49303341 + L1MB4 LINE L1 6128 6180 0 538 198 104 26 chr18 37374230 37374422 -49303126 - L1MC5 LINE L1 -44 7917 7711 2016 148 0 0 chr18 37374433 37374724 -49302824 - AluSx SINE Alu -18 294 4 779 124 9 0 chr18 37374939 37375052 -49302496 + AluSq/x SINE Alu 5 118 -194 2066 102 72 19 chr18 37375073 37375436 -49302112 - Tigger4(Zombi) DNA MER2_type -17 2714 2333 1291 163 22 4 chr18 37375438 37375665 -49301883 - Tigger4(Zombi) DNA MER2_type -2500 231 1 662 230 29 6 chr18 37375681 37375855 -49301693 - MER20 DNA MER1_type -40 179 2 383 284 137 72 chr18 37376070 37376251 -49301297 - L3 LINE CR1 -43 1534 1327 2144 130 7 3 chr18 37376251 37376551 -49300997 - AluSx SINE Alu -9 303 3 383 284 137 72 chr18 37376551 37376647 -49300901 - L3 LINE CR1 -250 1327 1239 872 273 82 34 chr18 37376655 37376681 -49300867 - L2 LINE L2 0 3313 3290 2772 196 51 33 chr18 37376681 37377284 -49300264 + MER90 LTR ERV1 1 614 0 872 273 82 34 chr18 37377284 37377814 -49299734 - L2 LINE L2 -23 3290 2714 2091 152 7 0 chr18 37377844 37378154 -49299394 - AluSx SINE Alu 0 312 1 927 129 0 7 chr18 37378233 37378373 -49299175 - FLAM_C SINE Alu -4 139 1 415 276 39 16 chr18 37378377 37378504 -49299044 + L2 LINE L2 3180 3309 -4 199 316 189 25 chr18 37378498 37378694 -49298854 - L3 LINE CR1 -401 1176 949 * 285 75 0 0 chr18 37378890 37378930 -49298618 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 1152 189 0 28 chr18 37378931 37379148 -49298400 + AluJo SINE Alu 85 295 -17 400 315 96 20 chr18 37379182 37379379 -49298169 + MIR SINE MIR 30 241 -21 1208 79 0 48 chr18 37379444 37379656 -49297892 + AluSq SINE Alu 129 332 0 427 135 16 0 chr18 37379657 37379734 -49297814 - L1MB4 LINE L1 -274 5906 5839 249 233 16 108 chr18 37379799 37379928 -49297620 - L1MB4 LINE L1 -2380 5428 5312 2112 146 56 13 chr18 37380201 37380592 -49296956 + L1MB3 LINE L1 5774 6181 -2 3048 217 68 55 chr18 37380829 37381766 -49295782 - L1ME1 LINE L1 -79 6087 5163 1771 141 0 72 chr18 37381766 37382085 -49295463 - AluJb SINE Alu -16 296 1 3048 217 68 55 chr18 37382085 37382682 -49294866 - L1ME1 LINE L1 -1003 5163 4518 2535 70 0 0 chr18 37382682 37382984 -49294564 - AluY SINE Alu -9 302 1 3048 217 68 55 chr18 37382984 37383243 -49294305 - L1ME1 LINE L1 -1648 4518 4264 2357 234 27 25 chr18 37383246 37383801 -49293747 - LTR38 LTR ERV1 0 556 1 1756 199 0 0 chr18 37383868 37384160 -49293388 - AluJo SINE Alu -20 292 1 379 208 10 73 chr18 37384160 37384256 -49293292 - L1MB4 LINE L1 -2053 4093 4004 1487 182 55 11 chr18 37384263 37384538 -49293010 - AluJo SINE Alu -23 289 3 5124 94 6 3 chr18 37384553 37385220 -49292328 - L1PA10 LINE L1 0 6168 5500 1593 191 53 10 chr18 37385220 37385524 -49292024 - L1P3 LINE L1 -6135 326 10 397 331 7 7 chr18 37385719 37385870 -49291678 - MER52A LTR ERV1 0 1755 1605 * 1236 243 63 68 chr18 37385866 37386261 -49291287 - MER52A LTR ERV1 -271 1484 1092 1037 176 169 59 chr18 37386248 37386521 -49291027 - MER52A LTR ERV1 -785 970 668 * 1162 222 32 41 chr18 37386533 37386721 -49290827 - L1MB4 LINE L1 -2472 3674 3489 1705 144 8 19 chr18 37386721 37386985 -49290563 - AluSx SINE Alu -17 295 35 1162 222 32 41 chr18 37386985 37387134 -49290414 - L1MB4 LINE L1 -2657 3489 3340 524 163 70 0 chr18 37387138 37387224 -49290324 - FLAM_A SINE Alu -19 123 32 1938 247 112 10 chr18 37387252 37387929 -49289619 + L1MB3 LINE L1 2926 3671 -2475 588 100 12 0 chr18 37387944 37388024 -49289524 + MSTA LTR MaLR 1 81 -347 4063 174 50 29 chr18 37388024 37388448 -49289100 + L1MB3 LINE L1 5334 5747 -436 3017 174 33 18 chr18 37388448 37388957 -49288591 + MLT2B3 LTR ERVL 1 520 -34 474 49 0 0 chr18 37388957 37389018 -49288530 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 3017 174 33 18 chr18 37389018 37389054 -49288494 + MLT2B3 LTR ERVL 520 554 0 4063 174 50 29 chr18 37389054 37389460 -49288088 + L1MB3 LINE L1 5747 6182 -1 485 245 163 26 chr18 37389813 37390000 -49287548 - L1M4 LINE L1 -2254 3892 3665 1195 250 126 29 chr18 37390000 37390291 -49287257 - LTR40c LTR ERVL -3 462 116 2278 105 0 0 chr18 37390291 37390587 -49286961 - AluSc SINE Alu -13 296 1 1195 250 126 29 chr18 37390587 37390715 -49286833 - LTR40c LTR ERVL -349 116 2 485 245 163 26 chr18 37390715 37390760 -49286788 - L1M4 LINE L1 -2481 3665 3628 2254 186 38 0 chr18 37391562 37391961 -49285587 - MER54A LTR ERVL 0 901 488 1079 130 49 5 chr18 37392338 37392523 -49285025 + L1MB2 LINE L1 5943 6135 -36 29 28 0 0 chr18 37394174 37394210 -49283338 + AT_rich Low_complexity Low_complexity 1 36 0 2043 132 0 10 chr18 37394577 37394872 -49282676 - AluSx SINE Alu -20 292 1 655 194 0 65 chr18 37394894 37395018 -49282530 + FLAM_A SINE Alu 20 135 -7 2085 141 0 3 chr18 37395510 37395815 -49281733 - AluSx SINE Alu -8 304 1 1813 174 0 13 chr18 37397130 37397429 -49280119 - AluJo SINE Alu -17 295 1 28 29 0 0 chr18 37397758 37397793 -49279755 + AT_rich Low_complexity Low_complexity 1 35 0 263 309 0 0 chr18 37398224 37398305 -49279243 + (TGG)n Simple_repeat Simple_repeat 3 83 0 23 33 0 0 chr18 37398851 37398881 -49278667 + AT_rich Low_complexity Low_complexity 1 30 0 2496 57 0 3 chr18 37399190 37399488 -49278060 + AluY SINE Alu 1 297 -14 297 0 0 0 chr18 37399492 37399525 -49278023 + (CAA)n Simple_repeat Simple_repeat 2 34 0 493 325 58 5 chr18 37399577 37399783 -49277765 - L2 LINE L2 -253 3060 2844 1345 186 232 98 chr18 37399893 37400517 -49277031 + L1MC4 LINE L1 7335 8042 0 296 194 32 0 chr18 37400925 37400987 -49276561 + MER5A DNA MER1_type 13 76 -113 2283 104 0 0 chr18 37400987 37401284 -49276264 + AluSg SINE Alu 1 297 -13 2497 57 0 0 chr18 37401780 37402076 -49275472 + AluY SINE Alu 1 296 -15 600 324 128 52 chr18 37402239 37403036 -49274512 - L2 LINE L2 0 3272 2434 459 242 23 39 chr18 37403376 37403504 -49274044 - L2 LINE L2 -1 3312 3187 992 156 5 73 chr18 37403762 37403954 -49273594 + FRAM SINE Alu 1 176 0 828 137 0 0 chr18 37404704 37404821 -49272727 - FLAM_C SINE Alu -24 119 3 22 0 0 0 chr18 37404920 37404942 -49272606 + AT_rich Low_complexity Low_complexity 1 22 0 2148 145 7 0 chr18 37405177 37405487 -49272061 - AluSx SINE Alu 0 312 1 243 61 0 0 chr18 37409374 37409407 -49268141 + (A)n Simple_repeat Simple_repeat 1 33 0 258 318 0 0 chr18 37410636 37410762 -49266786 + (ATGGTG)n Simple_repeat Simple_repeat 1 126 0 919 153 0 0 chr18 37411422 37411553 -49265995 + FLAM_C SINE Alu 1 131 -2 21 0 0 0 chr18 37411786 37411807 -49265741 + AT_rich Low_complexity Low_complexity 1 21 0 917 130 15 0 chr18 37411810 37411941 -49265607 - FLAM_C SINE Alu 0 133 1 1806 136 3 20 chr18 37414921 37415215 -49262333 + AluJo SINE Alu 1 289 -23 1264 150 107 9 chr18 37415553 37415786 -49261762 + MER41D LTR ERV1 1 256 -301 198 0 0 0 chr18 37415965 37415987 -49261561 + (T)n Simple_repeat Simple_repeat 1 22 0 1233 154 99 21 chr18 37415987 37416220 -49261328 - AluSg SINE Alu -59 251 1 223 336 74 16 chr18 37416292 37416414 -49261134 - L2 LINE L2 -6 3266 3138 261 57 0 0 chr18 37417743 37417778 -49259770 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 337 194 148 53 chr18 37417803 37417938 -49259610 - AluSp/q SINE Alu -7 296 220 180 0 0 0 chr18 37417938 37417958 -49259590 + (T)n Simple_repeat Simple_repeat 1 20 0 996 53 0 38 chr18 37418130 37418263 -49259285 - AluYa5/8 SINE Alu 0 311 184 575 198 10 0 chr18 37418264 37418365 -49259183 - AluJo/FLAM SINE Alu -209 103 2 215 260 0 104 chr18 37418379 37418456 -49259092 + MIR3 SINE MIR 92 160 -48 1846 211 26 20 chr18 37418487 37418942 -49258606 + Charlie1b DNA MER1_type 66 523 0 24 53 0 0 chr18 37419544 37419582 -49257966 + AT_rich Low_complexity Low_complexity 1 38 0 271 335 45 9 chr18 37419653 37419761 -49257787 - MIR3 SINE MIR -111 97 8 1440 260 67 36 chr18 37419895 37420467 -49257081 + L1MC4 LINE L1 7266 7991 -51 305 152 0 61 chr18 37420647 37420713 -49256835 - AluJo SINE Alu 0 302 241 625 167 61 18 chr18 37420714 37420786 -49256762 - AluJo SINE Alu -113 199 119 189 0 0 0 chr18 37420786 37420807 -49256741 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 625 167 61 18 chr18 37420807 37420848 -49256700 - AluJo SINE Alu -193 119 81 928 210 12 0 chr18 37421416 37421578 -49255970 - FAM SINE Alu -11 164 1 958 266 81 6 chr18 37421935 37422281 -49255267 + L1MC4 LINE L1 7192 7563 -479 333 210 0 0 chr18 37422286 37422348 -49255200 - L1ME LINE L1 -458 5663 5602 25 51 0 0 chr18 37424005 37424044 -49253504 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr18 37424063 37424087 -49253461 + AT_rich Low_complexity Low_complexity 1 24 0 1823 161 24 0 chr18 37424087 37424379 -49253169 - AluJo SINE Alu -11 301 3 614 116 0 0 chr18 37424402 37424488 -49253060 - AluJ/FRAM SINE Alu -11 301 216 333 138 0 92 chr18 37424488 37424553 -49252995 - AluSc SINE Alu -124 175 117 2125 139 0 22 chr18 37424575 37424891 -49252657 - AluSx SINE Alu -3 309 1 1545 198 7 10 chr18 37425930 37426223 -49251325 - AluJb SINE Alu -12 300 9 2180 92 0 81 chr18 37427325 37427660 -49249888 - AluSx SINE Alu -4 308 1 1503 174 102 4 chr18 37427660 37427935 -49249613 - AluJo SINE Alu -10 302 1 970 145 25 0 chr18 37428552 37428711 -49248837 - THE1C LTR MaLR 0 375 213 593 149 0 21 chr18 37428711 37428805 -49248743 - THE1C LTR MaLR -272 92 1 591 275 29 23 chr18 37429879 37430118 -49247430 - L1ME3A LINE L1 -281 5889 5674 451 235 96 0 chr18 37430970 37431085 -49246463 + FLAM_A SINE Alu 2 127 -15 633 225 82 102 chr18 37431202 37431320 -49246228 + MIR SINE MIR 13 132 -130 1576 181 55 10 chr18 37431320 37431613 -49245935 - AluJo SINE Alu -5 307 2 633 225 82 102 chr18 37431613 37431645 -49245903 + MIR SINE MIR 132 163 -99 2131 92 3 31 chr18 37431645 37431960 -49245588 - AluSq SINE Alu 0 307 1 633 225 82 102 chr18 37431960 37432051 -49245497 + MIR SINE MIR 163 251 -11 1008 187 61 45 chr18 37432079 37432330 -49245218 - MER21B LTR ERV1 -364 499 254 2111 86 75 0 chr18 37432330 37432609 -49244939 - AluY SINE Alu -11 300 1 1008 187 61 45 chr18 37432609 37432768 -49244780 - MER21B LTR ERV1 -609 254 1 7589 138 23 53 chr18 37432790 37432814 -49244734 - MER21B-int LTR ERV1 -25 4166 4143 1725 152 0 55 chr18 37432814 37433123 -49244425 + AluJb SINE Alu 1 292 -20 7589 138 23 53 chr18 37433123 37434464 -49243084 - MER21B-int LTR ERV1 -48 4143 2841 4238 192 36 71 chr18 37434461 37435316 -49242232 - MER4B-int LTR ERV1 -1576 5182 4365 * 2006 148 7 0 chr18 37435316 37435620 -49241928 - AluJb SINE Alu -6 306 1 4238 192 36 71 chr18 37435620 37435744 -49241804 - MER4B-int LTR ERV1 -2393 4365 4238 908 151 0 26 chr18 37435760 37435912 -49241636 + AluJb SINE Alu 1 148 -164 358 183 0 0 chr18 37435915 37435975 -49241573 - MER4B-int LTR ERV1 -1056 3135 3076 2015 108 17 20 chr18 37435980 37436275 -49241273 - AluSq SINE Alu -19 294 1 865 148 7 28 chr18 37436299 37436441 -49241107 + AluJb SINE Alu 164 302 -10 6822 136 34 26 chr18 37436441 37437583 -49239965 - MER4B-int LTR ERV1 -2523 4235 3085 2067 114 70 5 chr18 37437655 37437982 -49239566 - MER21A LTR ERV1 -8 597 498 619 99 25 66 chr18 37437990 37438111 -49239437 - L1MC1 LINE L1 0 6333 6218 431 268 98 59 chr18 37438151 37438438 -49239110 + MARNA DNA Mariner 86 383 -203 23 68 0 0 chr18 37438633 37438677 -49238871 + AT_rich Low_complexity Low_complexity 1 44 0 426 250 76 8 chr18 37438680 37438812 -49238736 - MIR SINE MIR -21 241 101 1997 117 16 26 chr18 37439236 37439543 -49238005 - AluSq SINE Alu -9 304 1 1011 220 19 0 chr18 37439581 37439795 -49237753 + L1MC/D LINE L1 5375 5592 -650 948 128 14 14 chr18 37439830 37439971 -49237577 - AluJo SINE Alu -82 230 90 525 187 73 0 chr18 37439975 37440098 -49237450 - Cheshire DNA MER1_type -802 1618 1487 939 221 21 0 chr18 37440252 37440442 -49237106 - Cheshire DNA MER1_type -940 1480 1287 682 136 64 32 chr18 37440445 37440570 -49236978 + Cheshire DNA MER1_type 879 1007 -1413 181 81 27 27 chr18 37441608 37441645 -49235903 + (GA)n Simple_repeat Simple_repeat 1 37 0 2338 108 0 0 chr18 37443327 37443632 -49233916 - AluSx SINE Alu -7 305 1 1999 149 0 10 chr18 37444512 37444813 -49232735 + AluJo SINE Alu 1 298 -14 934 128 0 0 chr18 37445485 37445610 -49231938 + AluSg/x SINE Alu 155 279 -33 2970 223 72 42 chr18 37446266 37447147 -49230401 - L1ME1 LINE L1 -5 6161 5187 1941 174 49 13 chr18 37447147 37447494 -49230054 - L1PB4 LINE L1 -8 6148 5784 342 0 0 0 chr18 37447494 37447532 -49230016 + (TG)n Simple_repeat Simple_repeat 2 39 0 1941 174 49 13 chr18 37447532 37447575 -49229973 - L1PB4 LINE L1 -372 5784 5744 2970 223 72 42 chr18 37447575 37448310 -49229238 - L1ME1 LINE L1 -979 5187 4475 2242 112 0 0 chr18 37449834 37450128 -49227420 + AluSx SINE Alu 3 296 -16 1835 160 0 27 chr18 37450140 37450440 -49227108 + AluSx SINE Alu 1 292 -20 2405 82 0 13 chr18 37450554 37450871 -49226677 - AluSq SINE Alu 0 313 1 38 39 0 0 chr18 37451461 37451513 -49226035 + AT_rich Low_complexity Low_complexity 1 52 0 1629 152 74 21 chr18 37451932 37452215 -49225333 - AluJb SINE Alu -14 298 1 2668 111 11 0 chr18 37452595 37452966 -49224582 - THE1C LTR MaLR 0 375 1 300 244 11 11 chr18 37453155 37453245 -49224303 - AluSp/q SINE Alu 0 303 214 216 0 0 0 chr18 37453370 37453394 -49224154 + (A)n Simple_repeat Simple_repeat 1 24 0 1443 253 57 10 chr18 37453897 37454301 -49223247 - MLT1J LTR MaLR -54 457 35 253 287 11 11 chr18 37454301 37454388 -49223160 + MIR SINE MIR 151 237 -25 2345 102 0 0 chr18 37454748 37455051 -49222497 - AluSq SINE Alu -10 303 1 266 191 0 0 chr18 37455057 37455099 -49222449 - FLAM SINE Alu -6 127 86 1283 184 9 0 chr18 37455099 37455317 -49222231 - AluJo SINE Alu -92 220 1 532 54 68 0 chr18 37456503 37456577 -49220971 + MADE1 DNA Mariner 2 80 0 303 71 0 0 chr18 37458031 37458073 -49219475 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 203 273 61 0 chr18 37459152 37459218 -49218330 + MER5A DNA MER1_type 7 76 -113 191 167 48 0 chr18 37459372 37459414 -49218134 - MIR3 SINE MIR -54 154 111 365 245 146 31 chr18 37459458 37459650 -49217898 + MIR SINE MIR 24 237 -25 2421 100 0 3 chr18 37461358 37461668 -49215880 - AluSq SINE Alu -4 309 1 2485 76 0 3 chr18 37461828 37462131 -49215417 - AluSq SINE Alu -11 302 1 2193 126 0 7 chr18 37462746 37463056 -49214492 - AluSx SINE Alu -4 308 1 1893 166 0 10 chr18 37464154 37464462 -49213086 - AluJb SINE Alu -7 305 1 1014 157 21 42 chr18 37464524 37464715 -49212833 + AluJb SINE Alu 102 288 -24 23 0 0 0 chr18 37464937 37464960 -49212588 + AT_rich Low_complexity Low_complexity 1 23 0 375 299 68 91 chr18 37465683 37465947 -49211601 + MARNA DNA Mariner 125 382 -204 28 29 0 0 chr18 37466639 37466674 -49210874 + AT_rich Low_complexity Low_complexity 1 35 0 1625 101 18 0 chr18 37467217 37467435 -49210113 - AluSx SINE Alu -90 222 1 965 143 262 16 chr18 37468440 37468684 -49208864 - MER33 DNA MER1_type -19 305 2 2532 152 41 13 chr18 37469641 37470109 -49207439 + L1MB2 LINE L1 5684 6164 -7 422 263 0 9 chr18 37470168 37470282 -49207266 + MER103 DNA DNA 2 114 -52 414 171 26 0 chr18 37470742 37470818 -49206730 + L1ME1 LINE L1 5940 6017 -149 568 243 20 40 chr18 37470823 37471025 -49206523 + L1MC5 LINE L1 7453 7650 -311 559 172 0 0 chr18 37471068 37471161 -49206387 - FLAM_A SINE Alu -7 135 43 1168 60 0 0 chr18 37471621 37471754 -49205794 + AluSq/x SINE Alu 1 133 -179 21 0 0 0 chr18 37471754 37471775 -49205773 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 37471775 37471796 -49205752 + GC_rich Low_complexity Low_complexity 1 21 0 273 263 50 40 chr18 37472055 37472154 -49205394 + MLT1L LTR MaLR 178 277 -338 223 248 43 43 chr18 37472738 37472855 -49204693 - MER5B DNA MER1_type -61 117 1 198 0 0 0 chr18 37474315 37474337 -49203211 + (TC)n Simple_repeat Simple_repeat 1 22 0 203 328 16 0 chr18 37475326 37475390 -49202158 - MIR SINE MIR -190 72 8 1802 106 129 124 chr18 37475694 37475867 -49201681 + MSTA LTR MaLR 1 172 -256 1913 148 4 0 chr18 37475867 37476177 -49201371 + AluJb SINE Alu 3 313 0 1802 106 129 124 chr18 37476177 37476188 -49201360 + MSTA LTR MaLR 172 181 -247 1362 144 219 8 chr18 37476188 37476444 -49201104 + AluJb SINE Alu 1 310 -2 1802 106 129 124 chr18 37476444 37476683 -49200865 + MSTA LTR MaLR 181 428 0 1733 160 36 0 chr18 37476854 37477129 -49200419 - AluJo SINE Alu -25 287 3 180 0 0 0 chr18 37477148 37477168 -49200380 + (CA)n Simple_repeat Simple_repeat 1 20 0 549 134 0 0 chr18 37477239 37477321 -49200227 + L2 LINE L2 3225 3306 -7 3619 201 21 19 chr18 37477322 37478047 -49199501 + L1M4 LINE L1 3951 4680 -1466 2078 138 3 3 chr18 37478047 37478345 -49199203 - AluSx SINE Alu -14 298 1 3619 201 21 19 chr18 37478345 37478423 -49199125 + L1M4 LINE L1 4680 4756 -1390 2979 13 0 0 chr18 37478427 37478745 -49198803 + AluYb8 SINE Alu 1 318 0 240 35 0 0 chr18 37478896 37478925 -49198623 + (A)n Simple_repeat Simple_repeat 1 29 0 699 136 68 25 chr18 37479616 37479734 -49197814 - AluJb SINE Alu -188 124 2 2018 125 52 33 chr18 37479888 37480255 -49197293 - THE1C LTR MaLR -1 374 1 181 358 33 8 chr18 37480805 37480925 -49196623 - MIR SINE MIR -130 132 10 1972 122 55 6 chr18 37481305 37481632 -49195916 - L1MB4 LINE L1 -6 6174 5832 2229 118 0 16 chr18 37481953 37482259 -49195289 + AluJb SINE Alu 2 302 -10 2196 130 0 0 chr18 37482983 37483282 -49194266 - AluSx SINE Alu -13 299 1 647 186 168 12 chr18 37483294 37483461 -49194087 - MSTB1 LTR MaLR -50 382 190 2288 115 3 16 chr18 37483474 37483787 -49193761 - AluSx SINE Alu -2 310 2 7946 191 9 4 chr18 37483788 37484288 -49193260 - L1PA15 LINE L1 -6 6159 5663 2103 138 7 0 chr18 37484288 37484579 -49192969 - AluSx SINE Alu -19 293 1 7946 191 9 4 chr18 37484579 37486413 -49191135 - L1PA15 LINE L1 -502 5663 3775 1875 155 0 46 chr18 37486414 37486589 -49190959 - AluJb SINE Alu -4 308 153 3710 82 14 6 chr18 37486589 37487100 -49190448 - L1PB2 LINE L1 -4 6147 5633 1875 155 0 46 chr18 37487100 37487247 -49190301 - AluJb SINE Alu -159 153 1 901 193 0 0 chr18 37487247 37487413 -49190135 - L1PA15 LINE L1 -2359 3787 3622 828 117 0 0 chr18 37487813 37487924 -49189624 + AluSq/x SINE Alu 3 113 -200 548 242 50 42 chr18 37487924 37488131 -49189417 + L1MB7 LINE L1 5010 5213 -933 2695 140 59 10 chr18 37488131 37488623 -49188925 + L1MB7 LINE L1 5661 6176 -8 548 242 50 42 chr18 37488623 37488662 -49188886 + L1MB7 LINE L1 5213 5250 -896 1122 299 34 3 chr18 37488741 37489122 -49188426 - L1MC/D LINE L1 -2025 5783 5391 214 277 143 25 chr18 37490007 37490126 -49187422 - L2 LINE L2 -2 3311 3179 480 274 5 54 chr18 37490635 37490821 -49186727 - MIR SINE MIR -70 192 16 182 316 92 0 chr18 37491603 37491701 -49185847 + L3 LINE CR1 1408 1514 -63 1542 233 51 63 chr18 37491789 37491806 -49185742 - L1MB7 LINE L1 -36 6148 6132 1676 173 3 40 chr18 37491806 37492107 -49185441 + AluJo SINE Alu 1 290 -22 1542 233 51 63 chr18 37492107 37492429 -49185119 - L1MB7 LINE L1 -52 6132 5816 1710 160 14 18 chr18 37492429 37492704 -49184844 + AluJo SINE Alu 1 274 -38 1542 233 51 63 chr18 37492704 37492935 -49184613 - L1MB7 LINE L1 -368 5816 5584 216 330 113 9 chr18 37495596 37495702 -49181846 + MIR SINE MIR 38 154 -108 2237 135 0 3 chr18 37495705 37496016 -49181532 + AluSg SINE Alu 1 310 0 378 0 0 0 chr18 37496137 37496179 -49181369 + (A)n Simple_repeat Simple_repeat 1 42 0 613 215 200 0 chr18 37496614 37496819 -49180729 + MIR SINE MIR 9 254 -8 1712 257 42 33 chr18 37497068 37497620 -49179928 + MLT1G LTR MaLR 32 588 -2 2358 92 0 19 chr18 37498945 37499259 -49178289 + AluSx SINE Alu 1 308 -4 2272 111 3 9 chr18 37499259 37499573 -49177975 + AluSp SINE Alu 1 313 0 194 141 14 56 chr18 37500002 37500073 -49177475 + GA-rich Low_complexity Low_complexity 4 71 0 214 325 70 0 chr18 37500519 37500633 -49176915 - MIR SINE MIR -32 230 109 22 35 0 0 chr18 37500711 37500740 -49176808 + AT_rich Low_complexity Low_complexity 1 29 0 330 232 93 40 chr18 37501530 37501681 -49175867 - MIR SINE MIR -19 243 85 3289 226 102 12 chr18 37501682 37502577 -49174971 + L1MC4 LINE L1 6923 7897 -145 29 0 0 0 chr18 37502651 37502680 -49174868 + AT_rich Low_complexity Low_complexity 1 29 0 1775 170 0 17 chr18 37503819 37504113 -49173435 - AluJo SINE Alu -23 289 1 2150 113 0 0 chr18 37504131 37504464 -49173084 - AluSg SINE Alu 0 333 1 685 115 0 10 chr18 37504472 37504596 -49172952 - AluSg/x SINE Alu 0 309 187 2209 107 0 10 chr18 37504698 37505020 -49172528 + AluSx SINE Alu 5 312 0 237 160 20 0 chr18 37505121 37505171 -49172377 - LTR33 LTR ERVL -467 54 4 1222 178 0 19 chr18 37505604 37505818 -49171730 + AluSg/x SINE Alu 84 293 -19 1939 126 23 26 chr18 37505944 37506246 -49171302 + AluSx SINE Alu 1 301 -11 878 170 106 21 chr18 37506403 37506591 -49170957 + MER3 DNA MER1_type 6 209 0 240 208 42 0 chr18 37506550 37506598 -49170950 - MER3 DNA MER1_type -119 90 41 * 360 0 0 0 chr18 37506902 37506942 -49170606 + (TTCTG)n Simple_repeat Simple_repeat 3 42 0 2212 105 10 0 chr18 37507018 37507314 -49170234 - AluSp SINE Alu -14 299 1 9845 205 36 82 chr18 37507340 37507874 -49169674 - L1MB1 LINE L1 -321 6083 5526 2485 60 3 19 chr18 37507874 37508190 -49169358 - AluY SINE Alu 0 311 1 9845 205 36 82 chr18 37508190 37509118 -49168430 - L1MB1 LINE L1 -878 5526 4557 1036 150 0 36 chr18 37509118 37509285 -49168263 - FRAM SINE Alu -14 162 2 9845 205 36 82 chr18 37509285 37510433 -49167115 - L1MB1 LINE L1 -1847 4557 3358 2498 78 0 0 chr18 37510433 37510739 -49166809 - AluSc SINE Alu -2 307 2 9845 205 36 82 chr18 37510739 37512174 -49165374 - L1MB1 LINE L1 -3046 3358 2029 1637 167 0 77 chr18 37512178 37512502 -49165046 - AluJb SINE Alu -13 299 1 964 188 0 0 chr18 37512540 37512689 -49164859 - AluJo/FRAM SINE Alu -30 282 134 2211 128 0 0 chr18 37512690 37512986 -49164562 - AluSx SINE Alu -16 296 1 6664 79 16 1 chr18 37513033 37514137 -49163411 + L1PA13 LINE L1 5047 6163 0 551 239 9 0 chr18 37514142 37514251 -49163297 - FLAM_A SINE Alu -26 116 7 3028 227 56 30 chr18 37514262 37515376 -49162172 - L1MB1 LINE L1 -4324 2058 908 1983 125 20 17 chr18 37515376 37515673 -49161875 - AluSx SINE Alu -14 298 1 3028 227 56 30 chr18 37515673 37515790 -49161758 - L1MB1 LINE L1 -5474 908 796 1112 280 32 10 chr18 37515854 37516165 -49161383 - L1MB1 LINE L1 -5473 830 513 682 298 90 21 chr18 37516165 37516642 -49160906 - L1M4 LINE L1 -1925 4221 3712 239 0 0 31 chr18 37516831 37516863 -49160685 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1871 157 0 25 chr18 37517245 37517563 -49159985 - AluJo SINE Alu -2 310 1 3890 117 23 35 chr18 37517616 37518144 -49159404 - L1MA5 LINE L1 0 6300 5780 216 0 0 0 chr18 37518144 37518168 -49159380 + (CA)n Simple_repeat Simple_repeat 2 25 0 3890 117 23 35 chr18 37518168 37518297 -49159251 - L1MA5 LINE L1 -520 5780 5651 6015 155 9 10 chr18 37518309 37519944 -49157604 - L1PB1 LINE L1 -2 6149 4518 1846 156 73 25 chr18 37519961 37520319 -49157229 - THE1C LTR MaLR 0 375 1 550 74 0 25 chr18 37520319 37520400 -49157148 - THE1C-int LTR MaLR 0 1580 1502 43934 31 22 1 chr18 37520412 37526436 -49151112 - L1PA3 LINE L1 -3 6152 3 8646 128 96 9 chr18 37526430 37527833 -49149715 - THE1C-int LTR MaLR -56 1524 1 * 1773 130 96 37 chr18 37527833 37528187 -49149361 - THE1C LTR MaLR 0 375 1 17998 161 27 15 chr18 37528193 37533206 -49144342 - L1PBa LINE L1 -1637 5225 3 3356 154 25 11 chr18 37533215 37534150 -49143398 - L1M2 LINE L1 -632 5668 4723 729 250 97 58 chr18 37534350 37534730 -49142818 + L2 LINE L2 2804 3198 -115 455 316 79 11 chr18 37534851 37535117 -49142431 - L2 LINE L2 -586 2728 2445 298 277 20 40 chr18 37536885 37536986 -49140562 + MIR SINE MIR 30 128 -80 829 236 42 64 chr18 37537122 37537435 -49140113 + L2 LINE L2 3008 3313 0 1878 123 0 120 chr18 37537520 37537853 -49139695 + AluJb SINE Alu 5 297 -5 856 169 0 0 chr18 37537855 37537985 -49139563 + AluJo/FRAM SINE Alu 137 266 -46 2419 72 3 0 chr18 37538663 37538956 -49138592 + AluSg SINE Alu 1 294 -16 742 210 26 44 chr18 37539451 37539680 -49137868 - Charlie2 DNA MER1_type 0 2862 2638 333 0 0 0 chr18 37539736 37539773 -49137775 + (TG)n Simple_repeat Simple_repeat 2 38 0 243 61 0 0 chr18 37539775 37539808 -49137740 + (GA)n Simple_repeat Simple_repeat 2 34 0 231 217 0 0 chr18 37539848 37539894 -49137654 + L1MC4 LINE L1 6658 6703 -1339 934 219 11 35 chr18 37539894 37540154 -49137394 - Charlie2 DNA MER1_type -251 2611 2358 827 172 0 14 chr18 37540154 37540299 -49137249 - FLAM_C SINE Alu 0 143 1 635 262 66 15 chr18 37540300 37540733 -49136815 - Charlie2 DNA MER1_type -513 2349 1857 348 317 158 0 chr18 37540748 37540969 -49136579 - Charlie2 DNA MER1_type -2549 313 58 2103 118 3 26 chr18 37541158 37541462 -49136086 - AluSp SINE Alu -16 297 1 1878 131 46 23 chr18 37541701 37542006 -49135542 - AluSx SINE Alu 0 312 1 286 171 66 26 chr18 37542419 37542495 -49135053 - MIR3 SINE MIR -24 184 106 234 308 231 14 chr18 37543687 37543830 -49133718 - MIR3 SINE MIR -7 201 28 723 201 85 0 chr18 37544141 37544305 -49133243 - L1ME3 LINE L1 -92 6070 5893 2098 134 0 20 chr18 37544431 37544737 -49132811 + AluJb SINE Alu 1 300 -12 337 267 172 22 chr18 37546006 37546186 -49131362 + L2 LINE L2 2763 2969 -345 364 291 19 0 chr18 37546278 37546381 -49131167 + L2 LINE L2 3209 3313 0 1348 150 20 61 chr18 37546460 37546706 -49130842 + MER46A DNA MER2_type 1 236 0 318 254 30 9 chr18 37547371 37547477 -49130071 + L1ME LINE L1 5587 5659 -462 899 179 98 27 chr18 37547480 37547518 -49130030 + AluJo SINE Alu 84 118 -194 432 0 0 0 chr18 37547518 37547566 -49129982 + (CA)n Simple_repeat Simple_repeat 2 49 0 899 179 98 27 chr18 37547566 37547711 -49129837 + AluJo SINE Alu 118 280 -32 1880 172 7 0 chr18 37547794 37548085 -49129463 - AluSx SINE Alu -18 294 2 1776 186 0 0 chr18 37548116 37548406 -49129142 + AluJo SINE Alu 1 290 -22 1777 167 6 13 chr18 37549184 37549496 -49128052 + AluSq SINE Alu 1 310 -3 581 114 0 0 chr18 37550078 37550157 -49127391 + U4 snRNA snRNA 1 79 -66 232 191 0 0 chr18 37551019 37551066 -49126482 + LTR66 LTR ERVL 393 439 -171 509 296 28 9 chr18 37551159 37551375 -49126173 - L1ME3 LINE L1 -296 5825 5606 1791 146 0 0 chr18 37551450 37551717 -49125831 - AluSx SINE Alu -39 273 7 334 149 81 27 chr18 37553107 37553181 -49124367 - L1MD3 LINE L1 -13 7982 7905 391 320 78 43 chr18 37554758 37554989 -49122559 - L3 LINE CR1 -66 1511 1273 2351 84 3 3 chr18 37555727 37556023 -49121525 + AluSc SINE Alu 3 298 -11 224 305 96 96 chr18 37556069 37556112 -49121436 + L2 LINE L2 3024 3066 -206 1933 141 0 36 chr18 37556112 37556418 -49121130 - AluJo SINE Alu -17 295 1 224 305 96 96 chr18 37556418 37556571 -49120977 + L2 LINE L2 3065 3220 -52 39 60 0 0 chr18 37556614 37556681 -49120867 + AT_rich Low_complexity Low_complexity 1 67 0 2167 116 0 19 chr18 37557486 37557804 -49119744 + AluSx SINE Alu 1 312 0 287 44 0 0 chr18 37558124 37558169 -49119379 - L1MA3 LINE L1 0 6305 6261 2259 44 0 4 chr18 37558330 37558600 -49118948 + AluY SINE Alu 40 308 -3 1839 85 13 0 chr18 37560301 37560537 -49117011 + AluSx SINE Alu 59 297 -15 347 268 162 43 chr18 37560540 37561011 -49116537 + L1MEd LINE L1 920 1343 -4862 31127 40 1 2 chr18 37561269 37565699 -49111849 - L1PA6 LINE L1 -87 6067 1643 1882 153 0 17 chr18 37565799 37566094 -49111454 - AluSx SINE Alu -22 290 1 540 271 46 50 chr18 37566404 37566666 -49110882 - MIR SINE MIR 0 262 2 924 280 93 55 chr18 37566705 37567746 -49109802 + L1MEd LINE L1 2070 3118 -3097 244 331 18 25 chr18 37568084 37568247 -49109301 + L1MEd LINE L1 2568 2729 -3486 451 205 32 90 chr18 37568352 37568508 -49109040 + L1MEd LINE L1 4232 4378 -1837 715 182 0 0 chr18 37568513 37568623 -49108925 + MER45A DNA AcHobo 68 177 -1 960 269 39 11 chr18 37569329 37569690 -49107858 - L1M4 LINE L1 -3043 3103 2733 1681 218 41 5 chr18 37569782 37570199 -49107349 - L1M4 LINE L1 -2050 4096 3665 578 271 23 27 chr18 37570204 37570425 -49107123 - L1M4 LINE L1 -3601 2545 2326 349 270 163 9 chr18 37570442 37570657 -49106891 + L1M4 LINE L1 3707 3954 -2192 575 286 7 0 chr18 37570827 37570967 -49106581 + LTR67 LTR ERVL 415 555 -2 248 291 0 0 chr18 37571422 37571477 -49106071 + MLT1-int LTR MaLR 808 862 -509 297 321 37 37 chr18 37572101 37572210 -49105338 - L2 LINE L2 -39 3233 3125 26 74 0 0 chr18 37572681 37572735 -49104813 + AT_rich Low_complexity Low_complexity 1 54 0 529 269 45 19 chr18 37572767 37572923 -49104625 - MIR SINE MIR -66 196 37 811 258 9 24 chr18 37572963 37573176 -49104372 - MIR SINE MIR -39 223 14 818 221 13 0 chr18 37573341 37573495 -49104053 - FRAM SINE Alu -9 157 2 2178 119 0 3 chr18 37573686 37573980 -49103568 + AluY SINE Alu 3 295 -16 290 328 98 8 chr18 37574630 37574752 -49102796 + MIR SINE MIR 92 224 -38 248 260 13 0 chr18 37575138 37575215 -49102333 + (TA)n Simple_repeat Simple_repeat 1 78 0 353 191 32 64 chr18 37575289 37575367 -49102181 - MER69 DNA AcHobo 0 2526 2450 1524 189 79 0 chr18 37575367 37575647 -49101901 + AluJb SINE Alu 1 302 -10 353 191 32 64 chr18 37575647 37575662 -49101886 - MER69 DNA AcHobo -76 2450 2436 280 284 40 0 chr18 37575772 37575846 -49101702 - MER69 DNA AcHobo -2449 77 1 2315 98 10 0 chr18 37576166 37576462 -49101086 + AluSq SINE Alu 1 299 -14 21 0 0 0 chr18 37576826 37576847 -49100701 + AT_rich Low_complexity Low_complexity 1 21 0 722 204 7 7 chr18 37577325 37577467 -49100081 - Zaphod DNA AcHobo 0 4031 3890 1043 303 102 9 chr18 37577583 37577926 -49099622 - MER115 DNA AcHobo -318 375 1 2190 258 58 40 chr18 37577933 37578088 -49099460 + HAL1 LINE L1 659 810 -1697 2251 125 0 0 chr18 37578088 37578400 -49099148 - AluSx SINE Alu 0 312 1 2190 258 58 40 chr18 37578400 37579060 -49098488 + HAL1 LINE L1 810 1494 -1013 2152 163 21 3 chr18 37579060 37579397 -49098151 + MER2 DNA MER2_type 1 343 -1 2190 258 58 40 chr18 37579397 37579499 -49098049 + HAL1 LINE L1 1494 1593 -914 1386 244 59 82 chr18 37579504 37580066 -49097482 + MLT1H LTR MaLR 1 549 0 411 253 0 10 chr18 37580070 37580169 -49097379 + MLT1H-int LTR MaLR 5 102 -1269 1678 171 30 0 chr18 37580348 37580647 -49096901 + AluSx SINE Alu 1 308 -4 427 303 67 6 chr18 37582347 37582525 -49095023 - MIR SINE MIR -54 208 20 1908 132 0 13 chr18 37582998 37583308 -49094240 - AluJb SINE Alu -6 306 1 399 264 19 9 chr18 37583315 37583421 -49094127 - L1ME3A LINE L1 -5 6165 6059 253 189 213 110 chr18 37584609 37584736 -49092812 + MER5A DNA MER1_type 41 180 -9 237 288 30 0 chr18 37585148 37585214 -49092334 + tRNA-Ile-ATT tRNA tRNA 7 74 -3 575 248 56 6 chr18 37585374 37585535 -49092013 - MIR SINE MIR -40 222 54 1218 188 143 41 chr18 37586232 37586700 -49090848 + L1MC5 LINE L1 7402 7917 -44 347 195 23 23 chr18 37588821 37588908 -49088640 + L2 LINE L2 2699 2785 -529 464 217 0 0 chr18 37588971 37589054 -49088494 + L2 LINE L2 3225 3307 -6 218 316 51 71 chr18 37589069 37589230 -49088318 - L3 LINE CR1 -17 1560 1402 2211 104 0 0 chr18 37589230 37589528 -49088020 - AluSg SINE Alu -12 298 1 218 316 51 71 chr18 37589528 37589562 -49087986 - L3 LINE CR1 -175 1402 1369 400 221 44 44 chr18 37590081 37590303 -49087245 - L1ME4a LINE L1 -43 6078 5762 261 254 88 26 chr18 37590935 37591049 -49086499 + L2 LINE L2 3185 3305 -8 2240 118 0 3 chr18 37592670 37592984 -49084564 + AluSq SINE Alu 1 313 0 211 340 187 21 chr18 37594118 37594782 -49082766 + L2 LINE L2 1598 2371 -943 262 159 0 0 chr18 37594944 37594988 -49082560 + L2 LINE L2 3269 3312 -1 873 239 162 59 chr18 37595050 37595557 -49081991 - MLT1F1 LTR MaLR 0 567 9 1921 237 47 10 chr18 37595563 37596057 -49081491 - L1ME1 LINE L1 -20 6146 5635 1033 152 6 0 chr18 37596148 37596313 -49081235 - AluJb SINE Alu -10 302 137 6942 53 0 1 chr18 37598989 37599835 -49077713 - L1PA6 LINE L1 0 6154 5310 12867 67 5 3 chr18 37599935 37601849 -49075699 - L1P2 LINE L1 -542 5612 3694 11212 67 4 13 chr18 37601835 37603340 -49074208 + L1P2 LINE L1 2187 3678 -2468 * 544 348 11 11 chr18 37603462 37603649 -49073899 - L2 LINE L2 -1 3312 3126 315 206 29 98 chr18 37603646 37603748 -49073800 + MIR3 SINE MIR 107 201 -7 * 193 217 22 0 chr18 37605046 37605092 -49072456 + L2 LINE L2 3203 3249 -64 227 219 31 31 chr18 37605528 37605592 -49071956 - L2 LINE L2 0 3272 3209 338 308 42 0 chr18 37605705 37605825 -49071723 + MIR SINE MIR 106 230 -32 2229 249 122 28 chr18 37606729 37607997 -49069551 + L1ME3A LINE L1 4781 6165 -5 193 114 0 45 chr18 37608341 37608385 -49069163 + (TTCTCC)n Simple_repeat Simple_repeat 5 46 0 1512 113 90 30 chr18 37609154 37609420 -49068128 + AluJo SINE Alu 1 282 -30 30 0 0 0 chr18 37609420 37609450 -49068098 + AT_rich Low_complexity Low_complexity 1 30 0 502 105 53 0 chr18 37610039 37610115 -49067433 + MADE1 DNA Mariner 1 80 0 433 279 80 24 chr18 37610115 37610319 -49067229 - MIR SINE MIR -30 232 19 1156 189 5 19 chr18 37610426 37610632 -49066916 - MER58A DNA MER1_type -1 223 21 1600 271 160 10 chr18 37610782 37611743 -49065805 - L2 LINE L2 -50 3263 2138 408 228 146 8 chr18 37612548 37612671 -49064877 + MER117 DNA MER1_type 8 147 -50 288 0 0 0 chr18 37613510 37613542 -49064006 + (TGAG)n Simple_repeat Simple_repeat 1 32 0 419 208 250 33 chr18 37614155 37614367 -49063181 - LTR41 LTR ERVL -6 767 510 736 183 18 47 chr18 37614728 37614897 -49062651 - LTR41 LTR ERVL -609 164 1 330 242 33 83 chr18 37615473 37615593 -49061955 - MER5B DNA MER1_type -60 118 5 888 172 32 48 chr18 37616315 37616501 -49061047 + MER5A DNA MER1_type 6 188 -1 263 194 125 0 chr18 37616746 37616818 -49060730 + MER5A DNA MER1_type 14 94 -95 1511 104 40 5 chr18 37617764 37617885 -49059663 + MER30 DNA MER1_type 1 135 -95 2638 13 0 10 chr18 37617885 37618192 -49059356 + AluY SINE Alu 1 304 -7 1511 104 40 5 chr18 37618192 37618292 -49059256 + MER30 DNA MER1_type 135 230 0 2182 98 3 31 chr18 37619226 37619544 -49058004 + AluSq SINE Alu 1 309 -4 300 289 21 31 chr18 37620583 37620680 -49056868 + MIR SINE MIR 33 128 -80 870 236 42 64 chr18 37620816 37621129 -49056419 + L2 LINE L2 3008 3313 0 1768 123 0 120 chr18 37621214 37621547 -49056001 + AluJb SINE Alu 5 297 -5 809 169 0 0 chr18 37621549 37621679 -49055869 + AluJo/FRAM SINE Alu 137 266 -46 272 313 84 45 chr18 37622178 37622357 -49055191 - L2 LINE L2 -92 3180 2995 2303 72 3 0 chr18 37622357 37622649 -49054899 + AluSg SINE Alu 1 293 -17 713 214 26 44 chr18 37623144 37623373 -49054175 - Charlie2 DNA MER1_type 0 2862 2638 333 0 0 0 chr18 37623429 37623466 -49054082 + (TG)n Simple_repeat Simple_repeat 2 38 0 243 61 0 0 chr18 37623468 37623501 -49054047 + (GA)n Simple_repeat Simple_repeat 2 34 0 218 238 0 0 chr18 37623543 37623585 -49053963 + (TA)n Simple_repeat Simple_repeat 2 43 0 894 219 11 35 chr18 37623585 37623845 -49053703 - Charlie2 DNA MER1_type -251 2611 2358 825 174 0 14 chr18 37623845 37623989 -49053559 - FLAM_C SINE Alu 0 143 2 623 262 69 15 chr18 37623991 37624423 -49053125 - Charlie2 DNA MER1_type -513 2349 1857 388 245 36 65 chr18 37624517 37624656 -49052892 - Charlie2 DNA MER1_type -2670 192 58 1955 122 3 26 chr18 37624846 37625150 -49052398 - AluSp SINE Alu -16 297 1 2234 92 0 19 chr18 37625150 37625463 -49052085 - AluSx SINE Alu -4 308 1 1756 257 42 33 chr18 37626789 37627341 -49050207 - MLT1G LTR MaLR -2 588 32 708 215 200 0 chr18 37627590 37627795 -49049753 - MIR SINE MIR -8 254 9 360 0 0 0 chr18 37628230 37628270 -49049278 + (T)n Simple_repeat Simple_repeat 1 40 0 22 0 0 0 chr18 37628293 37628315 -49049233 + GC_rich Low_complexity Low_complexity 1 22 0 2120 113 0 10 chr18 37629565 37629875 -49047673 + AluSq SINE Alu 1 307 -6 867 279 56 52 chr18 37629981 37630286 -49047262 + MER45C DNA AcHobo 293 598 -355 585 249 165 8 chr18 37630408 37630722 -49046826 - MLT1H LTR MaLR -178 417 35 1718 130 30 43 chr18 37631070 37631371 -49046177 - AluSx SINE Alu -15 297 1 427 267 29 0 chr18 37633318 37633423 -49044125 - MER63 DNA MER1_type 0 1061 954 686 205 16 0 chr18 37633424 37633546 -49044002 + FLAM_C SINE Alu 2 125 -18 28 48 0 0 chr18 37633550 37633592 -49043956 + AT_rich Low_complexity Low_complexity 1 42 0 1205 231 12 0 chr18 37633593 37633840 -49043708 - MER63 DNA MER1_type -104 958 709 1074 266 100 33 chr18 37635035 37635426 -49042122 - MLT1J2 LTR MaLR -14 436 20 729 233 22 100 chr18 37635530 37635801 -49041747 + MIR SINE MIR 8 257 -5 2202 98 0 13 chr18 37635813 37636119 -49041429 + AluSx SINE Alu 1 302 -10 920 97 0 0 chr18 37636139 37636263 -49041285 + AluSg/x SINE Alu 150 273 -39 959 164 0 0 chr18 37637243 37637395 -49040153 + AluJb SINE Alu 136 287 -25 613 120 0 0 chr18 37637784 37637876 -49039672 - AluSp/q SINE Alu -6 307 216 329 167 0 19 chr18 37637877 37637931 -49039617 - AluYb8 SINE Alu -133 175 123 1925 123 11 3 chr18 37637943 37638228 -49039320 - AluSx SINE Alu -25 287 1 640 338 83 23 chr18 37638886 37639188 -49038360 + L3 LINE CR1 348 667 -910 315 310 73 54 chr18 37639265 37639490 -49038058 - MIR SINE MIR -10 252 20 324 364 90 41 chr18 37639600 37639943 -49037605 - LTR67 LTR ERVL -175 382 23 22 35 0 0 chr18 37639946 37639975 -49037573 + AT_rich Low_complexity Low_complexity 1 29 0 625 165 18 18 chr18 37639975 37640084 -49037464 - AluJ SINE Alu -17 295 187 804 127 0 16 chr18 37640085 37640211 -49037337 - AluJ SINE Alu -171 141 18 240 140 211 18 chr18 37640810 37640867 -49036681 + MIR SINE MIR 79 146 -62 612 229 188 28 chr18 37640971 37641189 -49036359 + MIR SINE MIR 2 254 -8 195 200 18 36 chr18 37642633 37642688 -49034860 - MER5A DNA MER1_type -80 109 56 2214 106 3 3 chr18 37642698 37643010 -49034538 + AluSx SINE Alu 1 312 0 601 214 54 18 chr18 37643055 37643223 -49034325 + MER5B DNA MER1_type 5 178 0 291 148 16 33 chr18 37644039 37644100 -49033448 - MLT1J LTR MaLR -3 508 449 5285 150 39 34 chr18 37644137 37645269 -49032279 + L1MC2 LINE L1 5184 6320 -24 244 241 89 62 chr18 37645448 37645560 -49031988 - MLT1J LTR MaLR 0 511 397 226 300 17 0 chr18 37645895 37645955 -49031593 - MLT1L LTR MaLR -349 266 206 278 296 14 0 chr18 37645994 37646065 -49031483 - MLT1L LTR MaLR -540 75 4 1119 173 33 86 chr18 37646367 37646668 -49030880 + L1MB7 LINE L1 4964 5248 -898 1029 244 35 25 chr18 37646671 37646990 -49030558 + L1MB7 LINE L1 5850 6171 -13 674 240 74 23 chr18 37647690 37647865 -49029683 - MIR SINE MIR -2 260 77 360 83 0 0 chr18 37648965 37649013 -49028535 - MLT2B1 LTR ERVL 0 520 473 1721 162 43 43 chr18 37649018 37649388 -49028160 + THE1C LTR MaLR 1 370 -5 180 0 0 0 chr18 37649396 37649416 -49028132 + (TC)n Simple_repeat Simple_repeat 1 20 0 661 172 0 16 chr18 37649437 37649559 -49027989 - MLT2C2 LTR ERVL -50 414 295 887 275 38 12 chr18 37649764 37649907 -49027641 + MIR SINE MIR 17 170 -92 2129 104 57 33 chr18 37649907 37650273 -49027275 - THE1C LTR MaLR 0 375 1 887 275 38 12 chr18 37650273 37650369 -49027179 + MIR SINE MIR 170 262 0 306 333 128 36 chr18 37650445 37650664 -49026884 + L1M4 LINE L1 4124 4362 -1784 531 0 0 0 chr18 37650735 37650794 -49026754 + (CA)n Simple_repeat Simple_repeat 2 60 0 198 0 0 0 chr18 37650801 37650823 -49026725 + (GA)n Simple_repeat Simple_repeat 2 23 0 209 143 24 24 chr18 37650884 37650926 -49026622 + (TATATG)n Simple_repeat Simple_repeat 5 46 0 301 307 100 20 chr18 37651177 37651327 -49026221 + MIR SINE MIR 9 170 -92 2321 99 90 3 chr18 37652557 37652890 -49024658 - THE1B LTR MaLR -2 362 1 361 305 25 0 chr18 37658165 37658283 -49019265 + MER117 DNA MER1_type 1 121 -76 21 0 0 0 chr18 37659548 37659569 -49017979 + AT_rich Low_complexity Low_complexity 1 21 0 2147 110 0 10 chr18 37659968 37660278 -49017270 - AluSq SINE Alu -6 307 1 329 91 0 0 chr18 37661722 37661766 -49015782 + (TCCC)n Simple_repeat Simple_repeat 2 45 0 767 142 35 12 chr18 37661767 37661936 -49015612 + CT-rich Low_complexity Low_complexity 2 174 0 806 154 19 19 chr18 37663611 37663767 -49013781 - PABL_B LTR ERV1 0 667 512 320 264 44 11 chr18 37664702 37664793 -49012755 - MIR SINE MIR -112 150 57 655 279 44 35 chr18 37664920 37665146 -49012402 - MIR SINE MIR -27 235 8 433 253 76 38 chr18 37665218 37665376 -49012172 + MIR SINE MIR 23 186 -76 1938 97 76 3 chr18 37665376 37665664 -49011884 + AluY SINE Alu 1 309 -2 859 195 6 6 chr18 37665674 37665843 -49011705 + AluSq SINE Alu 130 298 -15 261 361 61 33 chr18 37665937 37666117 -49011431 + MIR SINE MIR 19 203 -59 261 0 0 0 chr18 37666155 37666184 -49011364 + (CCA)n Simple_repeat Simple_repeat 3 31 0 1947 127 3 17 chr18 37666658 37666958 -49010590 - AluSx SINE Alu -16 296 1 267 103 0 0 chr18 37670435 37670474 -49007074 + (GAA)n Simple_repeat Simple_repeat 2 40 0 323 242 31 129 chr18 37672831 37673025 -49004523 + MIR SINE MIR 23 197 -65 586 266 120 5 chr18 37673320 37673512 -49004036 + MIR SINE MIR 28 241 -21 182 255 59 20 chr18 37673539 37673590 -49003958 + L2 LINE L2 3255 3307 -6 1019 221 28 0 chr18 37674585 37674798 -49002750 - MER20 DNA MER1_type 0 219 1 828 267 66 79 chr18 37675778 37676220 -49001328 - L1MC4a LINE L1 -831 6977 6542 964 81 0 0 chr18 37676464 37676588 -49000960 + AluY SINE Alu 172 295 -16 677 192 45 51 chr18 37676800 37676977 -49000571 + Charlie1b DNA MER1_type 79 254 -269 517 287 138 70 chr18 37677099 37677709 -48999839 - L1M4c LINE L1 -962 1781 995 261 218 36 0 chr18 37678572 37678627 -48998921 - L1MD2 LINE L1 -37 6322 6266 774 256 41 46 chr18 37678779 37679154 -48998394 - MLT1J LTR MaLR -41 470 28 425 160 2 18 chr18 37679455 37679562 -48997986 - L1ME LINE L1 -485 5681 5587 428 157 121 0 chr18 37681520 37681603 -48995945 + MER5A DNA MER1_type 9 101 -88 1652 186 59 31 chr18 37682177 37682532 -48995016 + MLT1A1 LTR MaLR 1 365 0 335 269 19 9 chr18 37682664 37682772 -48994776 + MIR SINE MIR 82 190 -72 510 212 0 0 chr18 37682977 37683082 -48994466 - L1MD2 LINE L1 -446 5738 5644 21 36 0 0 chr18 37683525 37683553 -48993995 + AT_rich Low_complexity Low_complexity 1 28 0 351 0 0 0 chr18 37683578 37683617 -48993931 + (CA)n Simple_repeat Simple_repeat 2 40 0 341 232 20 20 chr18 37683628 37683727 -48993821 - MIR SINE MIR -90 118 20 355 288 46 46 chr18 37684828 37684981 -48992567 - MER5B DNA MER1_type -25 153 1 350 314 83 6 chr18 37685362 37685531 -48992017 + MIR SINE MIR 51 232 -30 319 239 0 0 chr18 37685655 37685726 -48991822 - MER5A DNA MER1_type -84 105 35 226 313 0 30 chr18 37686047 37686114 -48991434 + MER5B DNA MER1_type 114 178 0 314 0 0 47 chr18 37687149 37687192 -48990356 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 279 318 108 45 chr18 37688560 37688736 -48988812 - MIR SINE MIR -74 188 2 533 243 96 17 chr18 37688787 37688964 -48988584 + MIR SINE MIR 2 192 -70 356 281 126 60 chr18 37690418 37690735 -48986813 + L2 LINE L2 2934 3271 -1 4512 164 33 22 chr18 37691073 37692331 -48985217 - L1MB7 LINE L1 -14 6170 4892 1103 159 25 8 chr18 37694806 37695045 -48982503 - L1MB4 LINE L1 0 6180 5938 36 0 0 0 chr18 37695045 37695081 -48982467 + AT_rich Low_complexity Low_complexity 1 36 0 2337 92 0 7 chr18 37697105 37697400 -48980148 - AluSc SINE Alu -12 297 5 270 221 0 29 chr18 37698061 37698129 -48979419 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 4189 68 7 4 chr18 37698135 37698680 -48978868 - L1PA13 LINE L1 -5 6158 5612 1783 155 7 10 chr18 37699703 37699994 -48977554 + AluJb SINE Alu 2 291 -21 22 0 0 0 chr18 37700250 37700272 -48977276 + AT_rich Low_complexity Low_complexity 1 22 0 1186 285 95 23 chr18 37703078 37703678 -48973870 - L1MC4a LINE L1 -1637 6171 5529 516 227 15 23 chr18 37705532 37705664 -48971884 + L2 LINE L2 3183 3313 0 2544 190 63 24 chr18 37705736 37706419 -48971129 + Tigger7 DNA MER2_type 1 2586 -1 2166 121 0 19 chr18 37706957 37707271 -48970277 - AluY SINE Alu -3 308 1 313 116 0 0 chr18 37708790 37708833 -48968715 - MLT2B3 LTR ERVL 0 554 512 426 39 0 0 chr18 37708833 37708885 -48968663 + (TG)n Simple_repeat Simple_repeat 1 52 0 180 230 95 54 chr18 37709073 37709147 -48968401 + MIR3 SINE MIR 108 184 -24 252 86 0 0 chr18 37709227 37709262 -48968286 + (T)n Simple_repeat Simple_repeat 1 35 0 1703 146 22 15 chr18 37711003 37711271 -48966277 - AluJb SINE Alu -42 270 1 3982 218 165 21 chr18 37713464 37714848 -48962700 + L1M4 LINE L1 2171 3753 -2393 2016 142 0 0 chr18 37715104 37715433 -48962115 - AluSx SINE Alu 0 330 2 298 336 8 0 chr18 37716138 37716257 -48961291 - L2 LINE L2 -508 2806 2687 519 292 0 19 chr18 37716643 37716804 -48960744 - MIR SINE MIR -104 158 1 201 275 116 0 chr18 37716804 37716862 -48960686 + L2 LINE L2 3242 3307 -6 105 17 0 0 chr18 37717242 37717361 -48960187 + AT_rich Low_complexity Low_complexity 1 119 0 1816 151 18 3 chr18 37717361 37717645 -48959903 - AluJb SINE Alu -24 288 1 21 57 0 0 chr18 37718830 37718865 -48958683 + AT_rich Low_complexity Low_complexity 1 35 0 2184 100 31 0 chr18 37718897 37719186 -48958362 + AluSx SINE Alu 1 298 -14 316 287 19 0 chr18 37719524 37719632 -48957916 + MER117 DNA MER1_type 1 110 -87 4283 165 29 23 chr18 37720124 37720895 -48956653 - LTR39 LTR ERV1 -8 775 1 203 322 124 0 chr18 37721428 37721549 -48955999 + MIR SINE MIR 42 177 -85 319 259 24 12 chr18 37724117 37724202 -48953346 + L2 LINE L2 3228 3313 0 211 229 21 0 chr18 37724212 37724260 -48953288 + MIR3 SINE MIR 110 158 -50 2764 146 23 10 chr18 37726275 37726760 -48950788 - L1MB7 LINE L1 0 6184 5694 384 198 0 45 chr18 37726967 37727040 -48950508 + MER5A DNA MER1_type 4 72 -117 2168 96 4 0 chr18 37727040 37727312 -48950236 + AluSx SINE Alu 21 293 -19 384 198 0 45 chr18 37727312 37727349 -48950199 + MER5A DNA MER1_type 72 109 -80 483 18 0 0 chr18 37728866 37728922 -48948626 + (CA)n Simple_repeat Simple_repeat 2 57 0 447 68 0 0 chr18 37729635 37729694 -48947854 + (CA)n Simple_repeat Simple_repeat 2 60 0 429 70 0 0 chr18 37731359 37731416 -48946132 + (TCCA)n Simple_repeat Simple_repeat 1 57 0 * 654 79 0 0 chr18 37731415 37731504 -48946044 + (CCTA)n Simple_repeat Simple_repeat 1 89 0 1721 91 73 11 chr18 37732169 37732444 -48945104 - L1MA2 LINE L1 0 6304 6013 267 333 0 23 chr18 37732539 37732626 -48944922 + L2 LINE L2 2682 2766 -548 198 0 0 0 chr18 37734908 37734930 -48942618 + (T)n Simple_repeat Simple_repeat 1 22 0 758 252 45 20 chr18 37736034 37736280 -48941268 - L2 LINE L2 -31 3282 3031 303 49 0 0 chr18 37736706 37736747 -48940801 + (CA)n Simple_repeat Simple_repeat 2 42 0 * 333 0 0 0 chr18 37736746 37736783 -48940765 + (GA)n Simple_repeat Simple_repeat 2 38 0 391 218 164 61 chr18 37737811 37737976 -48939572 + MER5A DNA MER1_type 1 182 -7 1002 177 0 0 chr18 37740249 37740413 -48937135 - FRAM SINE Alu -2 164 1 2061 244 85 24 chr18 37740570 37741226 -48936322 - L1ME2 LINE L1 -9 6155 5460 184 281 16 0 chr18 37741241 37741305 -48936243 - MIR SINE MIR -136 126 62 1377 186 116 0 chr18 37743306 37743564 -48933984 + AluJb SINE Alu 5 292 -20 214 377 88 19 chr18 37744654 37744813 -48932735 + L2 LINE L2 3102 3271 -1 2318 143 35 35 chr18 37745253 37745708 -48931840 - L1MC2 LINE L1 -16 6328 5874 814 114 24 66 chr18 37745766 37745932 -48931616 - L1MC2 LINE L1 -475 5869 5711 495 161 110 34 chr18 37746397 37746515 -48931033 - L1MC2 LINE L1 -44 6300 6174 1322 204 3 67 chr18 37747258 37747557 -48929991 + AluJo SINE Alu 16 295 -17 2113 87 4 0 chr18 37747559 37747824 -48929724 + AluY SINE Alu 21 286 -25 183 42 0 0 chr18 37747856 37747880 -48929668 + (CA)n Simple_repeat Simple_repeat 2 25 0 394 337 42 6 chr18 37748173 37748339 -48929209 - MIR3 SINE MIR -21 187 16 3359 184 118 5 chr18 37749749 37750492 -48927056 + L1MC3 LINE L1 6180 6343 -1 2202 80 14 83 chr18 37751407 37751770 -48925778 - MER1B DNA MER1_type -1 338 1 665 247 29 11 chr18 37752411 37752585 -48924963 + MER45A DNA AcHobo 1 177 -1 193 297 60 73 chr18 37753689 37753921 -48923627 + L2 LINE L2 2827 3055 -217 618 252 142 31 chr18 37754386 37754767 -48922781 - HAL1 LINE L1 -169 2338 1916 457 272 73 21 chr18 37754807 37754998 -48922550 - HAL1 LINE L1 -695 1812 1612 1130 230 7 39 chr18 37755004 37755287 -48922261 + MLT1H LTR MaLR 1 274 -275 229 344 18 37 chr18 37755298 37755461 -48922087 + MLT1-int LTR MaLR 311 470 -901 712 168 0 0 chr18 37755714 37755827 -48921721 + FRAM SINE Alu 47 159 -17 234 346 31 23 chr18 37755967 37756097 -48921451 + MLT1-int LTR MaLR 735 865 -506 1684 152 50 58 chr18 37756157 37756500 -48921048 + L1PA16 LINE L1 5811 6150 -16 2435 78 0 0 chr18 37756510 37756805 -48920743 + AluY SINE Alu 1 295 -16 972 265 56 67 chr18 37756934 37757383 -48920165 - MLT1H LTR MaLR -147 408 1 2073 257 60 40 chr18 37757388 37757490 -48920058 - HAL1 LINE L1 -914 1593 1494 2043 163 21 3 chr18 37757490 37757827 -48919721 - MER2 DNA MER2_type -1 343 1 2073 257 60 40 chr18 37757827 37758485 -48919063 - HAL1 LINE L1 -1013 1494 809 2300 122 0 0 chr18 37758485 37758797 -48918751 + AluSx SINE Alu 1 312 0 2073 257 60 40 chr18 37758797 37758952 -48918596 - HAL1 LINE L1 -1698 809 659 1064 297 102 9 chr18 37758959 37759302 -48918246 + MER115 DNA AcHobo 1 375 -318 716 204 7 7 chr18 37759418 37759560 -48917988 + Zaphod DNA AcHobo 3890 4031 0 21 0 0 0 chr18 37760038 37760059 -48917489 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 37760334 37760355 -48917193 + AT_rich Low_complexity Low_complexity 1 21 0 2116 122 7 3 chr18 37760426 37760721 -48916827 - AluSq SINE Alu -17 296 1 2544 190 63 24 chr18 37761951 37762634 -48914914 + Tigger7 DNA MER2_type 1 2586 -1 2438 83 0 13 chr18 37763172 37763484 -48914064 - AluY SINE Alu -3 308 1 557 289 0 42 chr18 37763486 37763654 -48913894 - MIR SINE MIR -60 202 43 238 279 189 8 chr18 37764040 37764162 -48913386 - MIR SINE MIR -49 213 70 243 0 0 0 chr18 37764567 37764594 -48912954 + (A)n Simple_repeat Simple_repeat 1 27 0 184 377 31 23 chr18 37764932 37765062 -48912486 + L2 LINE L2 3142 3272 0 204 40 0 0 chr18 37765877 37765902 -48911646 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 2261 88 3 3 chr18 37767503 37767797 -48909751 - AluSp SINE Alu -19 294 1 23 33 0 0 chr18 37767801 37767831 -48909717 + AT_rich Low_complexity Low_complexity 1 30 0 324 289 69 77 chr18 37768231 37768491 -48909057 + L3 LINE CR1 673 930 -647 257 264 44 0 chr18 37768725 37768816 -48908732 + L3 LINE CR1 1264 1358 -219 255 274 0 0 chr18 37768859 37768921 -48908627 + L3 LINE CR1 1506 1567 -10 24 0 0 0 chr18 37769581 37769605 -48907943 + AT_rich Low_complexity Low_complexity 1 24 0 1293 198 75 4 chr18 37770324 37770576 -48906972 - MLT1E1 LTR MaLR -384 270 1 414 224 69 0 chr18 37770833 37770949 -48906599 + MER5C DNA MER1_type 1 124 -200 857 221 20 88 chr18 37771119 37771413 -48906135 - L1ME1 LINE L1 -6 6160 5887 * 2842 219 80 28 chr18 37771398 37772270 -48905278 - L1ME1 LINE L1 -1032 5114 4197 359 161 84 84 chr18 37773522 37773665 -48903883 - L1M4 LINE L1 -1434 4712 4570 1262 164 4 13 chr18 37774385 37774610 -48902938 - AluSc SINE Alu 0 309 87 329 233 221 12 chr18 37774748 37774920 -48902628 + MER5C DNA MER1_type 117 324 0 2423 104 0 0 chr18 37774934 37775242 -48902306 - AluSc SINE Alu -1 308 1 2529 193 58 26 chr18 37776761 37776802 -48900746 - MLT2B3 LTR ERVL 0 554 516 453 36 0 0 chr18 37776802 37776857 -48900691 + (TG)n Simple_repeat Simple_repeat 2 56 0 2529 193 58 26 chr18 37776857 37777349 -48900199 - MLT2B3 LTR ERVL -38 516 4 434 188 10 31 chr18 37777388 37777484 -48900064 - MER5A DNA MER1_type -86 103 10 186 337 32 21 chr18 37778365 37778460 -48899088 + L2 LINE L2 3201 3296 -17 21 0 0 0 chr18 37779691 37779712 -48897836 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 37779844 37779876 -48897672 + AT_rich Low_complexity Low_complexity 1 32 0 8139 199 74 47 chr18 37779878 37781250 -48896298 - L1MC4a LINE L1 0 7808 6351 1916 73 49 0 chr18 37781250 37781496 -48896052 + AluY SINE Alu 47 304 -7 8139 199 74 47 chr18 37781496 37782316 -48895232 - L1MC4a LINE L1 -1457 6351 5555 268 341 16 16 chr18 37783536 37783665 -48893883 - Tigger1 DNA MER2_type -1252 1166 1038 2119 76 7 0 chr18 37787214 37787490 -48890058 - L1PB1 LINE L1 -9 6142 5865 411 21 0 0 chr18 37787720 37787768 -48889780 + (TTTA)n Simple_repeat Simple_repeat 1 48 0 1993 146 0 16 chr18 37787790 37788106 -48889442 + AluJo SINE Alu 1 311 -1 25 0 0 0 chr18 37788153 37788178 -48889370 + AT_rich Low_complexity Low_complexity 1 25 0 2272 144 22 3 chr18 37789728 37790096 -48887452 - L1MB1 LINE L1 -11 6157 5783 218 119 48 0 chr18 37790097 37790139 -48887409 + (TATG)n Simple_repeat Simple_repeat 3 46 0 551 185 59 110 chr18 37790139 37790339 -48887209 - L1PB1 LINE L1 -352 5814 5629 282 100 0 20 chr18 37790339 37790389 -48887159 + L1PB1 LINE L1 5565 5613 -721 27 0 0 0 chr18 37791258 37791285 -48886263 + AT_rich Low_complexity Low_complexity 1 27 0 233 387 0 6 chr18 37791495 37791668 -48885880 + (CA)n Simple_repeat Simple_repeat 1 172 0 679 261 135 36 chr18 37791674 37791977 -48885571 - HAL1 LINE L1 -285 2222 1890 335 290 107 27 chr18 37792041 37792265 -48885283 - HAL1 LINE L1 -2096 411 170 258 192 0 0 chr18 37792320 37792372 -48885176 + HAL1 LINE L1 91 142 -2365 23 54 0 0 chr18 37792920 37792957 -48884591 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr18 37795505 37795525 -48882023 + (GGAA)n Simple_repeat Simple_repeat 2 21 0 198 0 0 0 chr18 37795947 37795969 -48881579 + (T)n Simple_repeat Simple_repeat 1 22 0 382 226 85 19 chr18 37796402 37796508 -48881040 + L2 LINE L2 3160 3272 0 447 68 0 0 chr18 37797676 37797735 -48879813 + (TG)n Simple_repeat Simple_repeat 2 60 0 2293 73 10 10 chr18 37799139 37799442 -48878106 + AluY SINE Alu 1 303 -8 2202 113 3 0 chr18 37800267 37800559 -48876989 + AluSx SINE Alu 6 298 -14 211 333 0 0 chr18 37800567 37800639 -48876909 - L2 LINE L2 0 3313 3242 3269 206 27 58 chr18 37800772 37801884 -48875664 - L1ME1 LINE L1 -9 6157 5083 21 0 0 0 chr18 37802789 37802810 -48874738 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 37802942 37802974 -48874574 + AT_rich Low_complexity Low_complexity 1 32 0 5550 200 73 35 chr18 37802976 37804343 -48873205 - L1MC4a LINE L1 0 7808 6390 1766 92 54 0 chr18 37804348 37804588 -48872960 + AluY SINE Alu 47 299 -12 888 209 7 0 chr18 37807017 37807170 -48870378 - FRAM SINE Alu -23 153 1 622 235 149 20 chr18 37807170 37807532 -48870016 + MER74C LTR ERVL 21 523 -35 2328 88 3 3 chr18 37808253 37808559 -48868989 + AluY SINE Alu 1 306 -5 2390 52 0 7 chr18 37809462 37809750 -48867798 + AluY SINE Alu 1 286 -25 332 180 115 43 chr18 37809885 37810024 -48867524 + L1ME4a LINE L1 5973 6121 0 409 271 86 7 chr18 37811278 37811418 -48866130 - MIR SINE MIR -80 182 32 279 311 22 37 chr18 37811470 37811605 -48865943 - MIR SINE MIR -71 191 59 1323 103 87 0 chr18 37812607 37812792 -48864756 - AluSg/x SINE Alu -28 284 84 2427 77 0 3 chr18 37812877 37813177 -48864371 - AluSg1 SINE Alu -10 299 1 3759 51 8 8 chr18 37814689 37815158 -48862390 - L1PA7 LINE L1 0 6154 5686 325 242 33 58 chr18 37815385 37815505 -48862043 - L1M4 LINE L1 -362 5800 5687 1942 154 14 0 chr18 37816384 37816664 -48860884 - AluSx SINE Alu -28 284 1 3058 41 6 3 chr18 37816827 37817228 -48860320 + L1PA3 LINE L1 5784 6185 0 15521 129 48 27 chr18 37817253 37819927 -48857621 + Tigger4(Zombi) DNA MER2_type 1 2731 0 2856 226 76 79 chr18 37820640 37821712 -48855836 + L1MC5 LINE L1 6542 7628 -333 1538 65 0 0 chr18 37821712 37821897 -48855651 + AluY SINE Alu 127 311 0 2856 226 76 79 chr18 37821897 37822215 -48855333 + L1MC5 LINE L1 7628 7945 -16 195 42 0 0 chr18 37823800 37823824 -48853724 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 401 246 72 30 chr18 37823877 37824044 -48853504 - MER5B DNA MER1_type 0 178 5 216 223 250 27 chr18 37824055 37824167 -48853381 - MER5A DNA MER1_type -26 163 27 372 164 27 0 chr18 37825673 37825746 -48851802 + MER116 DNA Mariner 1 75 -5 2491 63 0 3 chr18 37826446 37826749 -48850799 - AluY SINE Alu -9 302 1 2328 88 3 3 chr18 37827651 37827957 -48849591 - AluY SINE Alu -5 306 1 622 235 149 20 chr18 37828676 37829038 -48848510 - MER74C LTR ERVL -35 523 21 888 209 7 0 chr18 37829038 37829191 -48848357 + FRAM SINE Alu 1 153 -23 215 307 11 23 chr18 37829745 37829833 -48847715 - L2 LINE L2 -9 3263 3177 182 304 89 0 chr18 37830113 37830169 -48847379 - MIR3 SINE MIR -23 185 125 462 175 42 50 chr18 37830170 37830290 -48847258 + Charlie8 DNA MER1_type 40 158 -2259 514 191 71 28 chr18 37830996 37831137 -48846411 + Charlie8 DNA MER1_type 9 155 -2262 1771 179 3 13 chr18 37832386 37832699 -48844849 - AluJo SINE Alu -2 310 1 425 213 0 0 chr18 37832853 37832933 -48844615 + MER116 DNA Mariner 1 80 0 236 341 119 8 chr18 37834408 37834534 -48843014 + L2 LINE L2 2995 3134 -138 429 307 29 0 chr18 37835819 37835959 -48841589 + MER117 DNA MER1_type 1 144 -53 431 211 158 0 chr18 37836107 37836221 -48841327 + L3 LINE CR1 1444 1575 -2 2139 129 0 3 chr18 37836439 37836749 -48840799 + AluSx SINE Alu 1 309 -3 1365 248 120 40 chr18 37837456 37838005 -48839543 + MLT1E LTR MaLR 1 593 0 1654 131 95 11 chr18 37838869 37839143 -48838405 - AluSx SINE Alu -15 297 1 204 209 0 23 chr18 37840534 37840577 -48836971 + L2 LINE L2 3211 3252 -20 2140 76 66 0 chr18 37841978 37842266 -48835282 + AluSx SINE Alu 1 307 -5 398 311 121 28 chr18 37842694 37842942 -48834606 + L2 LINE L2 3043 3313 0 735 250 54 28 chr18 37842953 37843233 -48834315 - L1ME3A LINE L1 -308 5862 5569 472 331 21 0 chr18 37843487 37843632 -48833916 - MIR3 SINE MIR -12 196 49 308 331 30 8 chr18 37845625 37845758 -48831790 + MIR SINE MIR 106 241 -21 461 332 141 22 chr18 37846339 37846658 -48830890 - L3 LINE CR1 -3 1574 1218 684 115 0 0 chr18 37846897 37847059 -48830489 - AluJb SINE Alu 0 351 190 33 25 0 0 chr18 37848121 37848161 -48829387 + AT_rich Low_complexity Low_complexity 1 40 0 22 56 0 0 chr18 37848190 37848226 -48829322 + AT_rich Low_complexity Low_complexity 1 36 0 1718 212 16 11 chr18 37848257 37848639 -48828909 - MER58D DNA MER1_type -2 384 1 187 244 73 37 chr18 37848802 37848884 -48828664 - L3 LINE CR1 -866 711 627 752 254 55 0 chr18 37849825 37850006 -48827542 + L1MD2 LINE L1 515 705 -5835 3025 208 65 20 chr18 37850029 37850942 -48826606 + L1MD2 LINE L1 2761 3714 -2826 1023 252 173 21 chr18 37851007 37851497 -48826051 + L1MD2 LINE L1 6132 6739 -14 223 324 7 55 chr18 37851557 37851702 -48825846 + L3 LINE CR1 964 1101 -476 243 276 20 51 chr18 37851777 37851875 -48825673 + L3 LINE CR1 1245 1339 -238 2317 90 3 0 chr18 37853410 37853721 -48823827 + AluSx SINE Alu 1 312 0 1130 163 214 16 chr18 37853738 37853990 -48823558 + AluJo SINE Alu 1 302 0 208 239 7 167 chr18 37854239 37854377 -48823171 - L3b LINE CR1 -18 1565 1450 1341 227 37 53 chr18 37855319 37855708 -48821840 + MLT2D LTR ERVL 1 485 -35 315 175 0 0 chr18 37855753 37855810 -48821738 + MLT2D LTR ERVL 464 520 0 244 235 0 0 chr18 37857537 37857588 -48819960 + CT-rich Low_complexity Low_complexity 1 51 0 743 225 91 54 chr18 37857600 37857876 -48819672 - L2 LINE L2 -5 3308 3023 948 100 15 0 chr18 37859884 37860014 -48817534 - AluSq/x SINE Alu -181 132 1 2126 111 3 0 chr18 37860354 37860651 -48816897 + AluSx SINE Alu 1 298 -14 237 333 0 0 chr18 37860659 37860731 -48816817 - L2 LINE L2 0 3313 3242 3220 222 20 65 chr18 37860867 37861976 -48815572 - L1ME1 LINE L1 -9 6157 5118 2240 86 0 35 chr18 37861976 37862291 -48815257 - AluY SINE Alu -7 304 1 3220 222 20 65 chr18 37862291 37862514 -48815034 - L1ME1 LINE L1 -1048 5118 4886 427 226 85 19 chr18 37863352 37863458 -48814090 + L2 LINE L2 3160 3272 0 447 68 0 0 chr18 37864626 37864685 -48812863 + (TG)n Simple_repeat Simple_repeat 2 60 0 184 338 81 0 chr18 37864707 37864781 -48812767 - MIR3 SINE MIR -27 181 102 2163 73 10 10 chr18 37866089 37866392 -48811156 + AluY SINE Alu 1 303 -8 2181 86 0 0 chr18 37867214 37867524 -48810024 + AluY SINE Alu 3 312 0 189 74 0 0 chr18 37867559 37867586 -48809962 + (TTA)n Simple_repeat Simple_repeat 1 27 0 2118 79 0 85 chr18 37868455 37868795 -48808753 + AluY SINE Alu 1 311 0 359 188 116 36 chr18 37868905 37869043 -48808505 + L1ME4a LINE L1 5973 6121 0 479 262 94 55 chr18 37870235 37870437 -48807111 - MIR SINE MIR -21 241 32 330 311 22 37 chr18 37870489 37870624 -48806924 - MIR SINE MIR -71 191 59 237 288 50 0 chr18 37871128 37871208 -48806340 + L2 LINE L2 3189 3272 0 889 309 203 26 chr18 37871548 37872703 -48804845 + L2 LINE L2 1711 2660 -653 2040 124 3 3 chr18 37872703 37873001 -48804547 - AluSx SINE Alu -14 298 1 889 309 203 26 chr18 37873001 37873012 -48804536 + L2 LINE L2 2660 2668 -645 1645 166 3 21 chr18 37873012 37873302 -48804246 - AluJo SINE Alu -27 285 1 889 309 203 26 chr18 37873302 37873419 -48804129 + L2 LINE L2 2668 3228 -85 345 236 150 57 chr18 37875204 37875344 -48802204 + L3 LINE CR1 1423 1575 -2 1920 93 4 0 chr18 37877170 37877428 -48800120 - AluSp SINE Alu -54 259 1 384 268 32 32 chr18 37877579 37877823 -48799725 + MER41B LTR ERV1 54 430 -205 2065 86 24 14 chr18 37878158 37878449 -48799099 + AluSg SINE Alu 1 294 -16 303 292 49 7 chr18 37879778 37879922 -48797626 + L1ME4a LINE L1 5719 5868 -253 494 193 105 0 chr18 37880156 37880270 -48797278 - FLAM_A SINE Alu -6 127 2 846 273 51 48 chr18 37880578 37880810 -48796738 + L1MCc LINE L1 54 289 -6134 1737 161 0 13 chr18 37880810 37881144 -48796404 + AluJb SINE Alu 1 312 0 846 273 51 48 chr18 37881144 37881325 -48796223 + L1MCc LINE L1 289 468 -5955 189 235 0 0 chr18 37881576 37881610 -48795938 - MIR SINE MIR -106 156 123 799 329 133 14 chr18 37881697 37882180 -48795368 + L3 LINE CR1 473 1012 -565 187 325 128 34 chr18 37882222 37882339 -48795209 + L3 LINE CR1 1134 1261 -316 273 262 29 29 chr18 37884978 37885081 -48792467 + CT-rich Low_complexity Low_complexity 6 108 0 1190 171 136 68 chr18 37885082 37885451 -48792097 - MSTD LTR MaLR -2 394 1 2878 83 17 6 chr18 37886439 37886799 -48790749 + THE1B LTR MaLR 1 364 0 279 340 21 35 chr18 37887245 37887337 -48790211 + MIR SINE MIR 124 217 -45 1720 170 11 7 chr18 37887337 37887641 -48789907 + AluSx SINE Alu 1 305 0 279 340 21 35 chr18 37887641 37887687 -48789861 + MIR SINE MIR 217 262 0 232 175 18 35 chr18 37887726 37887783 -48789765 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 2173 101 0 36 chr18 37887831 37888137 -48789411 - AluY SINE Alu -16 295 1 812 253 5 23 chr18 37888140 37888361 -48789187 - L1MEc LINE L1 -1044 5171 4955 203 122 0 24 chr18 37888477 37888518 -48789030 + (TA)n Simple_repeat Simple_repeat 1 40 0 4359 218 85 11 chr18 37888547 37889761 -48787787 - L1MEc LINE L1 -1301 4914 3612 22 0 0 0 chr18 37889761 37889783 -48787765 + AT_rich Low_complexity Low_complexity 1 22 0 15133 42 2 7 chr18 37889783 37890776 -48786772 - L1P LINE L1 -988 5158 4175 2595 74 0 0 chr18 37890776 37891087 -48786461 - AluY SINE Alu 0 311 1 15133 42 2 7 chr18 37891087 37891945 -48785603 - L1P LINE L1 -1971 4175 3315 7708 51 3 1 chr18 37891945 37892936 -48784612 + L1PA5 LINE L1 5162 6154 0 3843 229 70 26 chr18 37892936 37894509 -48783039 - L1MEc LINE L1 -2562 3653 2048 374 133 24 96 chr18 37894509 37894592 -48782956 + Tigger2 DNA MER2_type 1 77 -2641 708 271 11 11 chr18 37894616 37894797 -48782751 - MER8 DNA MER2_type -58 181 1 3520 267 81 59 chr18 37894802 37896781 -48780767 - L1MEc LINE L1 -4352 2044 23 426 290 72 18 chr18 37896811 37897032 -48780516 + L1ME4a LINE L1 5602 5834 -287 876 241 40 0 chr18 37897967 37898166 -48779382 - MER69 DNA AcHobo -1006 220 14 221 313 52 43 chr18 37898645 37898760 -48778788 - MIR SINE MIR -135 127 12 203 250 36 18 chr18 37898884 37898940 -48778608 + L2 LINE L2 3213 3269 -3 201 132 0 0 chr18 37899116 37899154 -48778394 + (T)n Simple_repeat Simple_repeat 1 38 0 786 184 46 41 chr18 37899183 37899379 -48778169 - MER106A DNA MER1_type 0 236 40 797 201 92 0 chr18 37899840 37900051 -48777497 - L1MB4 LINE L1 0 6180 5945 639 0 0 0 chr18 37900247 37900318 -48777230 + (TATTG)n Simple_repeat Simple_repeat 2 72 0 2192 112 0 0 chr18 37900318 37900604 -48776944 - AluSx SINE Alu -26 286 1 247 314 27 65 chr18 37901059 37901244 -48776304 + MER5B DNA MER1_type 1 178 0 199 364 39 0 chr18 37901692 37901769 -48775779 - MIR3 SINE MIR -24 184 105 180 299 0 45 chr18 37902100 37902167 -48775381 + L2 LINE L2 3025 3088 -184 25 31 0 0 chr18 37904585 37904617 -48772931 + AT_rich Low_complexity Low_complexity 1 32 0 293 364 74 35 chr18 37904930 37905188 -48772360 - L2 LINE L2 -649 2665 2398 187 208 0 42 chr18 37905545 37905617 -48771931 + GA-rich Low_complexity Low_complexity 3 71 0 1509 146 0 55 chr18 37906330 37906583 -48770965 + AluSx SINE Alu 1 239 -73 767 222 66 0 chr18 37906683 37906850 -48770698 + AluSg/x SINE Alu 135 312 0 1258 256 37 67 chr18 37907118 37907610 -48769938 + L1MDb LINE L1 782 1258 -5151 * 8292 237 84 31 chr18 37907602 37910435 -48767113 + L1M4 LINE L1 2110 5092 -1054 363 264 35 49 chr18 37910544 37910688 -48766860 - MIR SINE MIR -62 200 59 1561 197 7 3 chr18 37911818 37912108 -48765440 + AluJb SINE Alu 3 293 -19 250 303 35 55 chr18 37912297 37912442 -48765106 - L1ME LINE L1 -394 5727 5586 419 247 102 30 chr18 37912477 37912643 -48764905 + MIR SINE MIR 63 240 -22 383 225 99 56 chr18 37912643 37912874 -48764674 - L1ME LINE L1 -535 5586 5378 2191 133 0 9 chr18 37913449 37913764 -48763784 - AluSx SINE Alu 0 312 1 449 223 80 34 chr18 37913913 37914088 -48763460 + L1ME4a LINE L1 5937 6119 -2 2135 108 28 0 chr18 37915314 37915600 -48761948 + AluSg SINE Alu 1 294 -16 232 175 18 35 chr18 37915648 37915705 -48761843 + (TATATG)n Simple_repeat Simple_repeat 3 58 0 2314 109 0 0 chr18 37917545 37917848 -48759700 - AluSx SINE Alu -9 303 1 855 108 0 0 chr18 37917993 37918122 -48759426 + (TCC)n Simple_repeat Simple_repeat 1 129 0 1745 116 0 0 chr18 37918679 37918912 -48758636 + AluSx SINE Alu 11 243 -69 216 229 307 36 chr18 37920661 37920801 -48756747 + L2 LINE L2 3083 3260 -12 1447 161 10 39 chr18 37920802 37921112 -48756436 + AluSq SINE Alu 1 301 -12 1735 158 14 3 chr18 37921160 37921445 -48756103 + L1PA13 LINE L1 5873 6160 -3 1522 55 22 0 chr18 37921480 37921661 -48755887 + AluY SINE Alu 1 185 -126 640 81 0 0 chr18 37921661 37921748 -48755800 + AluY SINE Alu 218 304 -7 1606 202 92 45 chr18 37922226 37922672 -48754876 + MLT1C LTR MaLR 1 467 0 45 0 0 18 chr18 37922927 37922964 -48754584 + AT_rich Low_complexity Low_complexity 1 38 -17 2072 123 0 0 chr18 37922964 37923249 -48754299 - AluSx SINE Alu -27 285 1 45 0 0 18 chr18 37923249 37923267 -48754281 + AT_rich Low_complexity Low_complexity 38 55 0 942 76 38 8 chr18 37924991 37925123 -48752425 - MER85 DNA T2_type -1 138 3 1534 180 163 31 chr18 37925639 37925989 -48751559 - MSTD LTR MaLR 0 396 1 6439 233 99 24 chr18 37925989 37927602 -48749946 - MSTD-int LTR MaLR 0 1735 2 1689 195 91 32 chr18 37927604 37927978 -48749570 - MSTD LTR MaLR 0 396 1 1168 256 65 47 chr18 37927978 37928427 -48749121 - L1ME1 LINE L1 -35 6131 5675 2122 140 0 6 chr18 37929044 37929358 -48748190 - AluSx SINE Alu 0 312 1 1334 170 86 20 chr18 37930689 37931241 -48746307 - MLT1E1 LTR MaLR -4 650 1 682 221 67 0 chr18 37931628 37931777 -48745771 + MER5A DNA MER1_type 31 189 0 2766 212 69 12 chr18 37931916 37932713 -48744835 - MER45B DNA AcHobo 0 1040 174 1886 153 11 3 chr18 37933132 37933419 -48744129 - AluSq SINE Alu -24 289 1 4639 174 28 9 chr18 37933458 37934287 -48743261 - L1MB7 LINE L1 -31 6153 5303 2386 94 3 3 chr18 37934287 37934596 -48742952 - AluSp SINE Alu -4 309 1 4639 174 28 9 chr18 37934596 37934706 -48742842 - L1MB7 LINE L1 -881 5303 5197 791 260 102 47 chr18 37934767 37935190 -48742358 - L1ME4a LINE L1 -5 6116 5671 579 249 120 29 chr18 37936784 37937025 -48740523 - L1ME3A LINE L1 -221 5949 5687 324 0 0 0 chr18 37937030 37937066 -48740482 + (TG)n Simple_repeat Simple_repeat 1 36 0 292 319 97 7 chr18 37937260 37937705 -48739843 - L1M4 LINE L1 -2636 3510 3026 248 245 0 132 chr18 37937700 37937758 -48739790 - L1M4 LINE L1 -2313 3833 3769 * 2412 73 17 0 chr18 37937758 37938058 -48739490 - AluSp SINE Alu -8 305 1 248 245 0 132 chr18 37938058 37938158 -48739390 - L1M4 LINE L1 -2377 3769 3696 410 262 59 59 chr18 37939063 37939284 -48738264 - L2 LINE L2 -1 3312 3092 402 308 46 47 chr18 37939484 37939839 -48737709 + L2 LINE L2 2687 3037 -235 601 278 178 28 chr18 37940769 37941129 -48736419 - MLT1H LTR MaLR 0 549 136 3217 166 18 0 chr18 37941240 37941799 -48735749 + L1MB1 LINE L1 5598 6166 -2 289 327 96 41 chr18 37943643 37943863 -48733685 - MIR SINE MIR -11 251 20 210 348 52 37 chr18 37945682 37945817 -48731731 - L2 LINE L2 0 3272 3136 180 237 88 105 chr18 37947604 37947718 -48729830 - MIR SINE MIR -73 189 78 282 310 16 16 chr18 37948401 37948530 -48729018 - L3 LINE CR1 -769 808 680 1638 164 65 19 chr18 37948613 37948936 -48728612 - MER58B DNA MER1_type -3 338 1 477 317 77 10 chr18 37948988 37949196 -48728352 - L2 LINE L2 -2875 439 218 952 177 98 20 chr18 37949289 37949492 -48728056 + MER20 DNA MER1_type 1 219 0 725 306 24 8 chr18 37950967 37951219 -48726329 - MIR SINE MIR 0 262 7 616 267 114 44 chr18 37951376 37951884 -48725664 - L1ME LINE L1 -354 5812 5270 4380 158 21 1 chr18 37952206 37952903 -48724645 - MER50 LTR ERV1 -23 711 1 576 236 151 24 chr18 37952903 37953115 -48724433 - MIR SINE MIR -8 254 16 434 324 47 29 chr18 37953141 37953416 -48724132 - MARNA DNA Mariner -201 385 106 730 127 0 34 chr18 37956736 37956854 -48720694 - AluSx SINE Alu -3 307 194 1082 130 0 0 chr18 37956855 37957001 -48720547 - AluSx SINE Alu -167 146 1 242 295 53 21 chr18 37958064 37958159 -48719389 + MER5B DNA MER1_type 36 133 -45 1926 55 17 0 chr18 37958706 37958836 -48718712 + AluY SINE Alu 1 138 -173 2285 49 42 11 chr18 37958836 37959122 -48718426 + AluY SINE Alu 1 295 -16 1926 55 17 0 chr18 37959122 37959229 -48718319 + AluY SINE Alu 138 242 -69 258 152 267 29 chr18 37961013 37961118 -48716430 + L2 LINE L2 3172 3301 -12 2247 105 10 0 chr18 37961119 37961413 -48716135 + AluSx SINE Alu 1 297 -15 1646 158 14 3 chr18 37961463 37961748 -48715800 + L1PA13 LINE L1 5873 6160 -3 1540 55 22 0 chr18 37961783 37961964 -48715584 + AluY SINE Alu 1 185 -126 632 77 0 0 chr18 37961964 37962055 -48715493 + AluY SINE Alu 218 308 -3 682 286 109 45 chr18 37962451 37962690 -48714858 - L1ME2 LINE L1 -257 5907 5685 1147 159 13 49 chr18 37962690 37962916 -48714632 - MER20 DNA MER1_type -1 218 1 682 286 109 45 chr18 37962916 37963252 -48714296 - L1ME2 LINE L1 -479 5685 5259 317 284 9 35 chr18 37964034 37964150 -48713398 + L3 LINE CR1 1173 1285 -292 297 267 260 0 chr18 37964166 37964312 -48713236 - MIR SINE MIR -50 212 29 1915 149 3 27 chr18 37964607 37964903 -48712645 + AluSx SINE Alu 3 291 -21 1777 246 121 44 chr18 37965044 37965954 -48711594 + L1ME3A LINE L1 3622 4601 -1545 1706 259 124 26 chr18 37965985 37966423 -48711125 + L1ME3A LINE L1 4815 5209 -961 2344 65 3 20 chr18 37966423 37966716 -48710832 + AluSq SINE Alu 1 288 -25 1706 259 124 26 chr18 37966716 37967478 -48710070 + L1ME3A LINE L1 5209 6170 0 400 250 88 6 chr18 37967907 37968067 -48709481 - MLT1K LTR MaLR -4 584 412 26 0 0 0 chr18 37968645 37968671 -48708877 + AT_rich Low_complexity Low_complexity 1 26 0 192 40 0 0 chr18 37968672 37968697 -48708851 + (TTG)n Simple_repeat Simple_repeat 1 25 0 638 133 85 73 chr18 37970887 37970937 -48706611 - L1MA9 LINE L1 0 6312 6264 1850 120 58 27 chr18 37970937 37971229 -48706319 + AluSq SINE Alu 2 302 -11 638 133 85 73 chr18 37971229 37971343 -48706205 - L1MA9 LINE L1 -48 6264 6146 643 219 101 22 chr18 37973274 37973502 -48704046 - MIR SINE MIR -1 261 16 776 205 120 5 chr18 37973890 37974090 -48703458 - Charlie2a DNA MER1_type -1173 1689 1467 469 300 71 19 chr18 37974245 37974455 -48703093 - Charlie2a DNA MER1_type -2559 303 83 213 121 0 0 chr18 37974503 37974536 -48703012 + (T)n Simple_repeat Simple_repeat 1 33 0 252 0 0 0 chr18 37975210 37975238 -48702310 + (CA)n Simple_repeat Simple_repeat 1 28 0 355 230 96 57 chr18 37976143 37976352 -48701196 - L1ME4a LINE L1 -196 5925 5709 230 258 126 57 chr18 37976396 37976555 -48700993 - L1ME4a LINE L1 -404 5717 5548 2302 104 7 0 chr18 37979453 37979752 -48697796 + AluSg SINE Alu 3 303 -7 1246 192 44 8 chr18 37982158 37982435 -48695113 - L1MB1 LINE L1 -10 6230 5949 317 286 99 6 chr18 37982589 37982750 -48694798 - L1ME4a LINE L1 -1086 5060 4885 342 0 0 0 chr18 37984240 37984278 -48693270 + (GA)n Simple_repeat Simple_repeat 1 38 0 1067 213 169 4 chr18 37984317 37984566 -48692982 + AluSc SINE Alu 1 290 -9 256 235 0 0 chr18 37984779 37984830 -48692718 - L2 LINE L2 -85 3187 3137 503 218 169 0 chr18 37986226 37986274 -48691274 - L1MA10 LINE L1 0 6334 6287 1209 204 54 32 chr18 37986274 37986677 -48690871 - L1ME1 LINE L1 -62 6104 5640 330 250 40 0 chr18 37986678 37986754 -48690794 - MER7C DNA MER2_type -1 601 523 578 255 20 51 chr18 37986754 37986950 -48690598 + L1M4 LINE L1 3343 3532 -2614 2187 176 101 5 chr18 37986954 37987392 -48690156 - MER7C DNA MER2_type -122 480 1 389 213 62 0 chr18 37987395 37987475 -48690073 - L1MB1 LINE L1 -528 5707 5623 6806 247 90 17 chr18 37987485 37990961 -48686587 - L1MB1 LINE L1 -2504 3711 36 990 267 80 48 chr18 37991711 37992172 -48685376 - MLT1H LTR MaLR 0 549 74 801 159 0 0 chr18 37993841 37993967 -48683581 - FRAM SINE Alu -11 165 40 1457 283 148 34 chr18 37995701 37996625 -48680923 - L1ME3A LINE L1 -215 6453 5636 2032 112 35 0 chr18 37996625 37996911 -48680637 - AluSp SINE Alu -17 296 1 1457 283 148 34 chr18 37996911 37997717 -48679831 - L1ME3A LINE L1 -1032 5636 4528 1894 152 50 0 chr18 37997720 37998038 -48679510 + AluJb SINE Alu 1 333 0 508 193 15 44 chr18 37998280 37998415 -48679133 - L1 LINE L1 -1114 5032 4902 * 2797 222 39 19 chr18 37998396 37999200 -48678348 - L1ME3A LINE L1 -4728 1918 1095 315 122 0 0 chr18 37999301 37999350 -48678198 + (A)n Simple_repeat Simple_repeat 1 49 0 371 307 71 30 chr18 37999384 38000762 -48676786 - L1 LINE L1 -2137 4009 2527 228 158 13 105 chr18 38000763 38000839 -48676709 - MLT1J LTR MaLR -12 499 431 548 206 56 0 chr18 38001695 38001821 -48675727 - L1PA16 LINE L1 -5 6161 6029 234 292 74 66 chr18 38001927 38002170 -48675378 - MIR SINE MIR -4 258 14 258 325 12 0 chr18 38003083 38003163 -48674385 + CT-rich Low_complexity Low_complexity 3 83 0 2013 129 14 0 chr18 38003348 38003652 -48673896 - AluSx SINE Alu 0 308 1 1306 252 53 84 chr18 38004705 38005552 -48671996 + L1ME LINE L1 259 1094 -4984 1847 160 10 16 chr18 38005571 38005878 -48671670 - AluJb SINE Alu -7 305 1 4385 81 11 57 chr18 38006797 38007428 -48670120 + L1PA10 LINE L1 5564 6165 -3 428 324 34 20 chr18 38008373 38008521 -48669027 + L2 LINE L2 3123 3272 0 334 161 0 18 chr18 38008774 38008830 -48668718 + 7SLRNA srpRNA srpRNA 182 236 -84 229 286 29 0 chr18 38010667 38010737 -48666811 + L3 LINE CR1 1317 1388 -189 557 282 38 0 chr18 38010891 38011022 -48666526 + L2 LINE L2 3136 3271 -1 937 192 17 0 chr18 38011517 38011694 -48665854 - L1MB2 LINE L1 -3 6168 5989 288 53 0 0 chr18 38015746 38015784 -48661764 + (TG)n Simple_repeat Simple_repeat 2 39 0 2085 106 13 29 chr18 38015834 38016145 -48661403 + AluSx SINE Alu 1 306 -6 731 165 0 0 chr18 38019262 38019377 -48658171 + FRAM SINE Alu 46 160 -16 2121 236 29 40 chr18 38019430 38019955 -48657593 - LTR40a LTR ERVL 0 519 1 207 331 104 68 chr18 38020901 38021536 -48656012 + L2 LINE L2 2149 2806 -508 1049 210 4 48 chr18 38022893 38023122 -48654426 + MER20 DNA MER1_type 1 219 0 207 162 0 0 chr18 38023578 38023615 -48653933 + (TG)n Simple_repeat Simple_repeat 2 38 0 263 288 0 14 chr18 38023672 38023745 -48653803 + MIR SINE MIR 1 72 -190 519 314 137 14 chr18 38023799 38024165 -48653383 - LTR33 LTR ERVL -62 459 49 408 277 69 25 chr18 38024198 38024357 -48653191 + MIR SINE MIR 81 246 -16 396 0 0 0 chr18 38026722 38026766 -48650782 + (TG)n Simple_repeat Simple_repeat 1 44 0 28 0 0 0 chr18 38028840 38028868 -48648680 + AT_rich Low_complexity Low_complexity 1 28 0 181 195 0 73 chr18 38028868 38028909 -48648639 + L2 LINE L2 2698 2735 -579 1742 225 115 59 chr18 38029190 38029781 -48647767 - MLT1E3 LTR MaLR 0 624 1 341 240 97 45 chr18 38032215 38032369 -48645179 + L2 LINE L2 3133 3294 -19 353 278 43 50 chr18 38032385 38032662 -48644886 + L1MDa LINE L1 34 400 -6140 5415 209 88 43 chr18 38032923 38034292 -48643256 + L1MDa LINE L1 992 2413 -4127 1199 163 72 4 chr18 38034292 38034556 -48642992 + L1MA4 LINE L1 6008 6289 -11 5415 209 88 43 chr18 38034556 38034992 -48642556 + L1MDa LINE L1 2413 2828 -3712 2032 134 3 3 chr18 38035031 38035323 -48642225 + AluSx SINE Alu 3 294 -18 2655 114 11 16 chr18 38035896 38036273 -48641275 + THE1C LTR MaLR 1 375 0 2100 267 223 41 chr18 38036340 38037683 -48639865 - L2 LINE L2 -54 3259 1509 417 39 0 0 chr18 38037683 38037734 -48639814 + (TG)n Simple_repeat Simple_repeat 2 52 0 2100 267 223 41 chr18 38037734 38038193 -48639355 - L2 LINE L2 -1804 1509 1135 2864 42 0 0 chr18 38038651 38039866 -48637682 + SVA Other Other 256 1470 0 284 0 28 0 chr18 38041083 38041119 -48636429 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 1119 105 0 26 chr18 38041457 38041610 -48635938 - AluSg1 SINE Alu -160 149 1 284 296 38 48 chr18 38042251 38042437 -48635111 + L1M4 LINE L1 548 731 -5811 1068 196 29 73 chr18 38042795 38043137 -48634411 - L1ME1 LINE L1 -65 6101 5775 240 269 30 47 chr18 38043147 38043317 -48634231 - L1M4b LINE L1 -6396 459 44 246 256 70 108 chr18 38044828 38044957 -48632591 + MLT1K LTR MaLR 57 180 -408 227 265 108 66 chr18 38044994 38045160 -48632388 + MLT1K LTR MaLR 303 475 -113 1763 170 16 19 chr18 38045168 38045491 -48632057 - L1MC3 LINE L1 -170 7615 7294 1000 188 6 0 chr18 38045508 38045689 -48631859 - MER90 LTR ERV1 0 614 433 195 243 100 14 chr18 38045926 38045996 -48631552 - MIR SINE MIR -69 193 118 293 316 76 19 chr18 38046004 38046162 -48631386 - MLT1H LTR MaLR 0 549 383 319 293 9 0 chr18 38047071 38047177 -48630371 + L1M4 LINE L1 2045 2151 -4674 433 288 128 43 chr18 38047277 38047628 -48629920 - L1MC4a LINE L1 -1883 5925 5545 680 277 178 13 chr18 38047721 38048104 -48629444 - L2 LINE L2 0 3313 2868 1527 114 59 0 chr18 38048681 38048918 -48628630 - HERVL LTR ERVL -274 5380 5130 365 146 0 0 chr18 38048918 38048973 -48628575 - 5S rRNA rRNA -65 56 2 4520 101 25 0 chr18 38048974 38049578 -48627970 - HERVL LTR ERVL -517 5137 4519 898 153 0 84 chr18 38049578 38049768 -48627780 - MLT2A2 LTR ERVL -279 174 1 246 147 0 0 chr18 38050299 38050333 -48627215 - Alu SINE Alu -99 34 1 5456 76 60 45 chr18 38050852 38051692 -48625856 + L1PB1 LINE L1 5299 6150 -1 881 186 115 20 chr18 38053171 38053424 -48624124 - LTR16A LTR ERVL 0 450 174 330 237 137 76 chr18 38056306 38056555 -48620993 + L1MC4a LINE L1 5854 6117 -1691 23 0 0 0 chr18 38056618 38056641 -48620907 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr18 38056868 38056890 -48620658 + AT_rich Low_complexity Low_complexity 1 22 0 861 264 81 3 chr18 38056985 38057280 -48620268 - MER90 LTR ERV1 -257 318 1 249 307 0 0 chr18 38057351 38057426 -48620122 - MLT1F1 LTR MaLR -448 119 45 287 267 82 37 chr18 38058177 38058312 -48619236 + MIR SINE MIR 15 155 -107 723 281 102 31 chr18 38060053 38060434 -48617114 - L1ME LINE L1 -398 5723 5316 2591 165 13 2 chr18 38060605 38061059 -48616489 - L1MB2 LINE L1 0 6171 5713 526 242 18 36 chr18 38061397 38061562 -48615986 + MLT1K LTR MaLR 124 285 -303 477 231 8 26 chr18 38062149 38062266 -48615282 + LTR16C LTR ERVL 373 487 -4 1596 125 0 17 chr18 38062996 38063236 -48614312 + AluSx SINE Alu 62 297 -15 453 236 126 16 chr18 38063416 38063598 -48613950 - L1ME4a LINE L1 -238 5883 5682 2168 97 0 21 chr18 38063608 38063924 -48613624 + AluSx SINE Alu 1 310 0 234 319 53 0 chr18 38066016 38066110 -48611438 + MER70B LTR ERVL 463 561 -17 939 214 30 17 chr18 38066326 38066560 -48610988 - L1ME4a LINE L1 -1158 4988 4752 1385 148 65 4 chr18 38066564 38066841 -48610707 - L1PA13 LINE L1 0 6163 5870 195 290 183 21 chr18 38067167 38067260 -48610288 - MIR SINE MIR -62 146 39 1399 136 87 4 chr18 38067790 38068055 -48609493 + AluSx SINE Alu 1 287 -25 318 278 11 0 chr18 38068218 38068308 -48609240 + MIR SINE MIR 34 124 -84 209 219 31 47 chr18 38068606 38068670 -48608878 + MIR SINE MIR 161 223 -39 183 232 0 0 chr18 38068778 38068834 -48608714 + (CA)n Simple_repeat Simple_repeat 2 57 0 1412 158 36 0 chr18 38068876 38069098 -48608450 - MER46A DNA MER2_type -6 230 1 284 94 19 0 chr18 38069120 38069173 -48608375 + (CAAAA)n Simple_repeat Simple_repeat 2 55 0 2165 163 171 158 chr18 38069783 38070190 -48607358 + L1MC3 LINE L1 6666 7066 -719 254 310 0 26 chr18 38070190 38070306 -48607242 + MLT1F1 LTR MaLR 13 125 -442 2165 163 171 158 chr18 38070306 38070697 -48606851 + L1MC3 LINE L1 7066 7591 -194 2354 84 10 0 chr18 38070697 38070993 -48606555 + AluSg SINE Alu 1 299 -11 904 202 90 16 chr18 38071007 38071337 -48606211 + MSTD LTR MaLR 1 365 0 670 171 0 0 chr18 38071458 38071575 -48605973 - L1 LINE L1 -1235 4911 4795 324 321 102 33 chr18 38071583 38071944 -48605604 - L1M4 LINE L1 -3192 2954 2569 22 0 0 0 chr18 38071957 38071979 -48605569 + AT_rich Low_complexity Low_complexity 1 22 0 249 281 74 60 chr18 38071985 38072268 -48605280 - L1M4 LINE L1 -3644 2502 2211 2058 91 42 14 chr18 38072268 38072555 -48604993 - AluY SINE Alu -16 295 1 249 281 74 60 chr18 38072555 38072638 -48604910 - L1M4 LINE L1 -3935 2211 2131 1129 195 49 137 chr18 38073220 38073630 -48603918 + MLT1A2 LTR MaLR 1 374 0 193 207 69 0 chr18 38074455 38074513 -48603035 + MIR SINE MIR 82 143 -65 1010 145 0 47 chr18 38075070 38075242 -48602306 + Tigger1 DNA MER2_type 2254 2417 -1 314 211 21 42 chr18 38075250 38075345 -48602203 - L1MC5 LINE L1 -32 7929 7837 4316 151 73 12 chr18 38075395 38076218 -48601330 - L1MB2 LINE L1 -16 6155 5283 214 280 84 9 chr18 38076407 38076514 -48601034 - L2 LINE L2 -2 3270 3156 403 136 11 45 chr18 38076549 38076637 -48600911 - L1MB8 LINE L1 -1 6177 6093 282 97 0 48 chr18 38076649 38076711 -48600837 - L1MB4 LINE L1 -4 6179 6120 481 277 78 49 chr18 38076877 38077231 -48600317 + L1MDa LINE L1 1098 1574 -4852 1779 211 79 41 chr18 38077283 38077974 -48599574 - L1ME LINE L1 -394 5772 5066 1177 269 51 0 chr18 38077978 38078331 -48599217 - L1ME LINE L1 -1275 4871 4501 1384 87 82 0 chr18 38078437 38078621 -48598927 - THE1B LTR MaLR -165 199 1 1875 149 0 13 chr18 38078770 38079072 -48598476 - AluSx SINE Alu -14 298 1 207 205 0 0 chr18 38079093 38079132 -48598416 - L2 LINE L2 -17 3255 3217 297 283 65 22 chr18 38080013 38080151 -48597397 + L2 LINE L2 3167 3310 -3 1937 148 21 3 chr18 38080519 38080809 -48596739 + AluSx SINE Alu 1 295 -17 1450 127 82 4 chr18 38081004 38081249 -48596299 - MSTA LTR MaLR -163 265 2 1525 159 54 58 chr18 38081261 38081556 -48595992 - AluJb SINE Alu -8 304 11 282 128 117 43 chr18 38081622 38081716 -48595832 + L1M4 LINE L1 4378 4478 -1668 542 294 5 16 chr18 38081741 38081928 -48595620 + L1ME LINE L1 5606 5790 -331 1093 201 120 31 chr18 38082124 38082729 -48594819 - MER39 LTR ERV1 0 639 6 633 247 99 16 chr18 38083190 38083372 -48594176 - MLT1B LTR MaLR 0 390 194 21 57 0 0 chr18 38083543 38083578 -48593970 + AT_rich Low_complexity Low_complexity 1 35 0 466 191 221 0 chr18 38084625 38084761 -48592787 - MER5B DNA MER1_type -8 170 5 574 219 159 7 chr18 38084810 38084961 -48592587 + MER5A DNA MER1_type 7 180 -9 247 235 0 0 chr18 38085056 38085107 -48592441 + MER34 LTR ERV1 25 75 -467 1860 132 0 17 chr18 38085211 38085500 -48592048 - MER4B LTR ERV1 0 610 327 2093 252 62 47 chr18 38085602 38085936 -48591612 - L1M4c LINE L1 -3753 2629 2301 354 23 0 0 chr18 38085936 38085979 -48591569 + (TG)n Simple_repeat Simple_repeat 2 44 0 2093 252 62 47 chr18 38085979 38086183 -48591365 - L1M4c LINE L1 -4081 2301 2102 1543 175 88 0 chr18 38086183 38086350 -48591198 - AluJb SINE Alu -2 310 159 248 0 31 0 chr18 38086350 38086382 -48591166 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 1543 175 88 0 chr18 38086382 38086499 -48591049 - AluJb SINE Alu -153 159 1 2093 252 62 47 chr18 38086499 38087522 -48590026 - L1M4c LINE L1 -4280 2102 909 270 0 0 0 chr18 38088763 38088793 -48588755 + (TAA)n Simple_repeat Simple_repeat 2 31 0 1862 143 25 0 chr18 38091786 38092072 -48585476 - AluJb SINE Alu -19 293 1 4566 137 39 4 chr18 38092146 38092920 -48584628 + Tigger1 DNA MER2_type 2 802 -1616 1193 154 19 0 chr18 38093025 38093239 -48584309 + L1P LINE L1 3473 3690 -2456 * 9738 102 9 0 chr18 38093229 38094702 -48582846 + L1P LINE L1 3507 4992 -1154 334 174 11 65 chr18 38095991 38096083 -48581465 - MER5C DNA MER1_type 0 324 238 21 0 0 0 chr18 38096533 38096554 -48580994 + AT_rich Low_complexity Low_complexity 1 21 0 506 122 0 0 chr18 38096731 38096805 -48580743 + AluS SINE Alu 1 74 -239 775 266 68 5 chr18 38096908 38097306 -48580242 + L1M4 LINE L1 2981 3403 -2743 586 223 106 5 chr18 38097436 38097624 -48579924 - MER3 DNA MER1_type 0 209 3 369 295 209 47 chr18 38097964 38098692 -48578856 - L2 LINE L2 -594 2720 1875 2266 270 77 28 chr18 38099406 38100061 -48577487 + L1MEc LINE L1 2058 2680 -3535 4128 53 0 0 chr18 38100061 38100573 -48576975 + L1PA6 LINE L1 5641 6152 -2 2266 270 77 28 chr18 38100573 38101607 -48575941 + L1MEc LINE L1 2680 3796 -2419 21 0 0 0 chr18 38102122 38102143 -48575405 + AT_rich Low_complexity Low_complexity 1 21 0 3430 186 14 45 chr18 38103162 38103962 -48573586 + LTR39 LTR ERV1 9 783 0 1270 164 86 0 chr18 38104458 38104714 -48572834 - L1MB4 LINE L1 -11 6169 5892 380 281 91 45 chr18 38104844 38105004 -48572544 - MIR SINE MIR -61 201 36 3684 218 31 10 chr18 38105089 38105907 -48571641 + MER21B LTR ERV1 12 846 -17 265 214 45 168 chr18 38106337 38106488 -48571060 - MIR SINE MIR 0 262 145 1702 156 20 30 chr18 38106488 38106790 -48570758 + AluJb SINE Alu 1 299 -13 265 214 45 168 chr18 38106790 38106858 -48570690 - MIR SINE MIR -117 145 70 356 336 38 0 chr18 38107197 38107328 -48570220 + L1MEc LINE L1 3876 4011 -2204 441 335 47 14 chr18 38107430 38107726 -48569822 + L1MEc LINE L1 4033 4338 -1877 1139 190 85 10 chr18 38107759 38107877 -48569671 + L1MC/D LINE L1 5282 5390 -1125 2171 162 26 12 chr18 38107877 38108056 -48569492 + MSTB LTR MaLR 1 176 -250 2088 97 0 4 chr18 38108056 38108375 -48569173 + AluSx SINE Alu 5 322 0 2171 162 26 12 chr18 38108375 38108614 -48568934 + MSTB LTR MaLR 176 426 0 1139 190 85 10 chr18 38108614 38108971 -48568577 + L1MC/D LINE L1 5390 5787 -728 442 288 40 0 chr18 38109355 38109480 -48568068 - L2 LINE L2 -190 3082 2953 320 154 264 0 chr18 38110172 38110263 -48567285 - L2 LINE L2 0 3313 3199 198 71 0 0 chr18 38110268 38110296 -48567252 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 381 311 8 8 chr18 38110311 38110433 -48567115 + L2 LINE L2 2172 2293 -1021 301 165 31 103 chr18 38110590 38110687 -48566861 + MER5B DNA MER1_type 88 177 -1 271 264 176 70 chr18 38110944 38111114 -48566434 - HAL1 LINE L1 -2137 370 219 288 0 0 0 chr18 38111114 38111146 -48566402 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 3430 81 0 2 chr18 38111146 38111601 -48565947 - L1PA7 LINE L1 -16 6138 5685 271 264 176 70 chr18 38111601 38111702 -48565846 - HAL1 LINE L1 -2287 220 69 383 274 103 12 chr18 38112159 38112355 -48565193 - MIR SINE MIR -43 219 1 572 228 88 23 chr18 38112817 38112988 -48564560 - MIR SINE MIR -15 247 66 245 179 0 0 chr18 38113092 38113131 -48564417 - MIR SINE MIR -207 55 17 685 256 21 71 chr18 38113989 38114270 -48563278 - L1ME1 LINE L1 -6 6160 5894 32 0 0 0 chr18 38114278 38114310 -48563238 + AT_rich Low_complexity Low_complexity 1 32 0 7590 31 2 0 chr18 38114310 38115530 -48562018 - L1PA2 LINE L1 0 6155 4935 2326 90 0 7 chr18 38115638 38115939 -48561609 + AluSx SINE Alu 1 299 -13 422 213 41 97 chr18 38115943 38116263 -48561285 + L1M4 LINE L1 3045 3346 -2800 853 241 66 88 chr18 38116305 38116803 -48560745 + L1ME LINE L1 41 527 -5543 997 218 0 28 chr18 38116831 38117047 -48560501 + AluJo SINE Alu 1 210 -102 191 36 36 0 chr18 38117075 38117103 -48560445 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 200 225 50 75 chr18 38118753 38118833 -48558715 + MIR3 SINE MIR 90 167 -41 22 0 0 0 chr18 38119363 38119385 -48558163 + AT_rich Low_complexity Low_complexity 1 22 0 2100 119 20 3 chr18 38119385 38119687 -48557861 + AluSx SINE Alu 1 307 -5 28 0 0 0 chr18 38120186 38120214 -48557334 + AT_rich Low_complexity Low_complexity 1 28 0 457 160 30 0 chr18 38120533 38120633 -48556915 - L1ME LINE L1 -690 5476 5374 * 4105 245 50 39 chr18 38120632 38121177 -48556371 - L1ME LINE L1 -1007 5139 4602 1431 186 31 28 chr18 38121177 38121468 -48556080 - AluJo SINE Alu -20 292 1 4105 245 50 39 chr18 38121468 38121558 -48555990 - L1ME LINE L1 -1544 4602 4515 2175 127 0 13 chr18 38121558 38121865 -48555683 - AluSc SINE Alu -6 303 1 4105 245 50 39 chr18 38121865 38122911 -48554637 - L1ME LINE L1 -1631 4515 3438 10167 46 3 2 chr18 38123118 38124478 -48553070 - L1P LINE L1 -2376 3770 2410 6150 52 1 0 chr18 38124480 38125238 -48552310 + L1PA5 LINE L1 5385 6143 -11 199 70 23 23 chr18 38125251 38125294 -48552254 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1070 162 5 59 chr18 38125294 38125326 -48552222 + L1PA15 LINE L1 5943 5975 -190 1384 203 17 30 chr18 38125326 38125627 -48551921 + AluJo SINE Alu 1 297 -15 1070 162 5 59 chr18 38125627 38125816 -48551732 + L1PA15 LINE L1 5975 6152 -13 204 40 0 0 chr18 38125820 38125845 -48551703 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1171 195 0 13 chr18 38126195 38126421 -48551127 + AluJo SINE Alu 87 309 -3 947 188 6 6 chr18 38126433 38126598 -48550950 + FRAM SINE Alu 2 166 0 430 168 24 24 chr18 38126942 38127067 -48550481 + CT-rich Low_complexity Low_complexity 3 127 0 1718 197 0 34 chr18 38127079 38127399 -48550149 - AluJb SINE Alu -3 309 1 743 182 6 6 chr18 38127518 38127677 -48549871 - L1MC3 LINE L1 -8 7777 7619 2399 155 36 2 chr18 38127692 38128104 -48549444 + MSTB LTR MaLR 1 426 0 981 206 50 21 chr18 38128134 38128443 -48549105 + L1MD3 LINE L1 7031 7563 -432 333 0 0 0 chr18 38128443 38128480 -48549068 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 221 227 0 0 chr18 38128480 38128524 -48549024 + GA-rich Low_complexity Low_complexity 1 44 0 1477 171 0 8 chr18 38129025 38129276 -48548272 + AluJo SINE Alu 1 249 -63 2195 127 19 32 chr18 38129495 38129864 -48547684 - THE1B LTR MaLR 0 364 1 960 212 40 119 chr18 38130269 38130665 -48546883 - MLT1A1 LTR MaLR 0 365 1 463 202 19 10 chr18 38130781 38130885 -48546663 + MER70B LTR ERVL 456 560 -18 1826 158 13 19 chr18 38131317 38131628 -48545920 - AluJo SINE Alu -1 311 3 19098 42 9 1 chr18 38131908 38134427 -48543121 + L1P LINE L1 2860 5398 -748 629 150 9 9 chr18 38134420 38134533 -48543015 - L1PA15 LINE L1 -208 5957 5845 * 2565 235 24 3 chr18 38134542 38135222 -48542326 - L1P LINE L1 -1689 4457 3764 1696 180 3 11 chr18 38135853 38136164 -48541384 - AluJb SINE Alu 0 309 1 390 287 30 0 chr18 38136211 38136312 -48541236 + L2 LINE L2 2941 3044 -269 231 36 0 0 chr18 38136509 38136537 -48541011 + (A)n Simple_repeat Simple_repeat 1 28 0 784 248 73 5 chr18 38136539 38137013 -48540535 + L1ME LINE L1 4942 5450 -712 25 51 0 0 chr18 38137896 38137935 -48539613 + AT_rich Low_complexity Low_complexity 1 39 0 335 289 31 0 chr18 38138160 38138288 -48539260 + L1ME LINE L1 5608 5739 -382 180 0 0 0 chr18 38138294 38138314 -48539234 + (TA)n Simple_repeat Simple_repeat 2 21 0 1996 126 14 0 chr18 38138316 38138593 -48538955 - AluSx SINE Alu -31 281 1 25 90 0 0 chr18 38138594 38138661 -48538887 + AT_rich Low_complexity Low_complexity 1 67 0 2338 74 3 0 chr18 38138993 38139290 -48538258 + AluY SINE Alu 1 298 -13 2135 181 6 0 chr18 38139594 38140070 -48537478 - L1 LINE L1 -1267 4879 4401 5797 105 27 3 chr18 38140079 38140978 -48536570 + L1PB1 LINE L1 5231 6150 -1 4429 138 21 15 chr18 38141011 38141807 -48535741 + L1MA4A LINE L1 5322 6122 -181 521 174 0 0 chr18 38141810 38141902 -48535646 + L1MA4A LINE L1 6188 6279 -24 22 0 0 0 chr18 38142220 38142242 -48535306 + AT_rich Low_complexity Low_complexity 1 22 0 1486 38 38 0 chr18 38142261 38142446 -48535102 - L1PA5 LINE L1 -2 6152 5961 385 270 99 13 chr18 38143501 38143653 -48533895 + L1ME LINE L1 24 188 -5882 660 270 82 22 chr18 38144248 38144547 -48533001 + L1M4c LINE L1 1516 1878 -865 1402 219 175 32 chr18 38144729 38145232 -48532316 + L1M4 LINE L1 4179 4753 -1393 232 271 0 0 chr18 38145235 38145283 -48532265 + MLT1E2 LTR MaLR 1 48 -606 1841 243 114 0 chr18 38145330 38145770 -48531778 + MLT1E2 LTR MaLR 137 626 0 1878 161 0 0 chr18 38145782 38146061 -48531487 + L1PA13 LINE L1 1 279 -6508 1268 94 0 39 chr18 38146060 38146263 -48531285 + L1PA13 LINE L1 2048 2242 -4545 * 6729 204 9 17 chr18 38146291 38147808 -48529740 + L1PA13 LINE L1 2602 4106 -2691 4737 198 26 29 chr18 38147944 38148923 -48528625 - L1PA15-16 LINE L1 -5195 1654 716 2209 122 3 0 chr18 38148934 38149238 -48528310 - AluSx SINE Alu -7 305 1 778 80 36 0 chr18 38150480 38150592 -48526956 + LTR9B LTR ERV1 445 560 -84 1953 100 0 8 chr18 38150601 38150860 -48526688 + AluY SINE Alu 30 286 -25 285 29 0 0 chr18 38150873 38150907 -48526641 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 416 205 51 0 chr18 38151983 38152061 -48525487 + MER68 LTR ERV1 480 561 -1 226 220 40 0 chr18 38152953 38153003 -48524545 - MIR3 SINE MIR -6 202 151 204 195 39 26 chr18 38153048 38153125 -48524423 + (TATAA)n Simple_repeat Simple_repeat 1 78 0 207 250 0 0 chr18 38153138 38153190 -48524358 + (TCCA)n Simple_repeat Simple_repeat 3 54 0 668 201 179 11 chr18 38153511 38153690 -48523858 - MER3 DNA MER1_type 0 209 1 540 156 37 18 chr18 38153869 38153978 -48523570 - MER34C LTR ERV1 0 585 475 2790 13 0 0 chr18 38154259 38154564 -48522984 + AluYa5 SINE Alu 1 305 -6 3392 148 46 11 chr18 38154946 38155574 -48521974 + L1PB4 LINE L1 5507 6156 0 360 64 0 0 chr18 38155889 38155936 -48521612 + (TG)n Simple_repeat Simple_repeat 2 48 0 3257 67 0 7 chr18 38156252 38156684 -48520864 - L1PA5 LINE L1 -1 6153 5725 2166 92 11 0 chr18 38156997 38157278 -48520270 - AluSq SINE Alu -29 284 1 267 369 71 0 chr18 38157599 38157797 -48519751 + L1MEd LINE L1 461 672 -5447 1557 112 17 4 chr18 38157895 38158136 -48519412 - MER65A LTR ERV1 0 445 202 420 156 0 0 chr18 38158148 38158238 -48519310 + (TG)n Simple_repeat Simple_repeat 2 91 0 1102 266 23 144 chr18 38158260 38158348 -48519200 + MLT1D-int LTR MaLR 731 828 -543 885 165 0 0 chr18 38158348 38158481 -48519067 - FLAM_C SINE Alu 0 133 1 1102 266 23 144 chr18 38158481 38159121 -48518427 + MLT1D-int LTR MaLR 828 1371 0 1993 179 122 22 chr18 38159121 38159580 -48517968 + MLT1D LTR MaLR 1 505 0 201 176 0 0 chr18 38159794 38159828 -48517720 + (TAA)n Simple_repeat Simple_repeat 1 34 0 359 352 62 26 chr18 38159844 38160037 -48517511 - MIR SINE MIR -19 243 44 275 277 59 10 chr18 38160646 38160747 -48516801 + L1ME3A LINE L1 5941 6046 -124 7269 48 7 2 chr18 38160894 38162583 -48514965 + L1PA5 LINE L1 4453 6152 -2 1431 193 24 20 chr18 38163079 38163374 -48514174 + AluJo SINE Alu 1 296 -16 22 0 0 0 chr18 38163413 38163435 -48514113 + AT_rich Low_complexity Low_complexity 1 22 0 1261 217 48 69 chr18 38163693 38164154 -48513394 + L1M4 LINE L1 3400 3850 -2296 12734 205 30 16 chr18 38164258 38168113 -48509435 + L1PA16 LINE L1 1761 5562 -1307 1887 96 0 0 chr18 38168113 38168353 -48509195 + AluSc SINE Alu 39 278 -31 189 0 0 0 chr18 38168356 38168377 -48509171 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 12734 205 30 16 chr18 38168377 38168448 -48509100 + L1PA16 LINE L1 5563 5632 -1237 2095 116 159 5 chr18 38168448 38168819 -48508729 + MSTA LTR MaLR 1 428 0 12734 205 30 16 chr18 38168819 38169928 -48507620 + L1PA16 LINE L1 5632 6867 -2 237 376 68 0 chr18 38169932 38170065 -48507483 - MIR SINE MIR -101 161 20 1224 226 206 7 chr18 38171316 38171762 -48505786 - L1ME1 LINE L1 -1 6165 5631 962 258 38 14 chr18 38171762 38172053 -48505495 - L2 LINE L2 -700 2614 2317 2240 117 0 0 chr18 38172805 38173113 -48504435 - AluSg SINE Alu -2 308 1 415 274 65 55 chr18 38173385 38173586 -48503962 - MLT1J LTR MaLR -51 460 258 924 224 55 0 chr18 38173591 38173792 -48503756 - MER20 DNA MER1_type 0 219 8 374 259 88 65 chr18 38173878 38174094 -48503454 - MLT1J LTR MaLR -290 221 1 1274 248 28 45 chr18 38174310 38174818 -48502730 - L1ME LINE L1 -4981 1089 591 1869 138 0 43 chr18 38174945 38175250 -48502298 + AluJb SINE Alu 2 293 -19 422 267 138 39 chr18 38175250 38175583 -48501965 - L1MEc LINE L1 -4369 2352 1987 342 268 88 84 chr18 38175588 38175701 -48501847 - L1MEc LINE L1 -4615 1925 1814 2240 110 3 0 chr18 38175701 38176000 -48501548 - AluSp SINE Alu -13 300 1 342 268 88 84 chr18 38176000 38176136 -48501412 - L1MEc LINE L1 -4726 1814 1675 796 298 130 30 chr18 38176140 38176979 -48500569 - L1MEc LINE L1 -5326 1395 473 1093 185 0 0 chr18 38178308 38178497 -48499051 + MER5A DNA MER1_type 1 189 0 231 231 0 31 chr18 38178951 38179016 -48498532 + CT-rich Low_complexity Low_complexity 1 63 0 420 259 116 37 chr18 38180431 38180647 -48496901 + L2 LINE L2 3080 3312 -1 893 104 0 0 chr18 38180662 38180777 -48496771 + AluSq/x SINE Alu 2 116 -197 1565 154 12 102 chr18 38180781 38180879 -48496669 - LTR9 LTR ERV1 -299 313 208 2317 99 0 0 chr18 38180879 38181183 -48496365 + AluY SINE Alu 1 304 -7 1565 154 12 102 chr18 38181183 38181428 -48496120 - LTR9 LTR ERV1 -404 208 1 2519 211 46 81 chr18 38181429 38182465 -48495083 - L1M4 LINE L1 -1698 4448 3449 2357 82 0 7 chr18 38182467 38182770 -48494778 - AluSc SINE Alu -8 301 1 1884 233 62 11 chr18 38182770 38183234 -48494314 - MLT1E2 LTR MaLR -2 624 137 1072 251 106 29 chr18 38183332 38183984 -48493564 - L1M4 LINE L1 -2683 3463 2762 2142 106 34 0 chr18 38184084 38184376 -48493172 - AluSx SINE Alu -10 302 1 197 239 0 22 chr18 38184851 38184897 -48492651 + L2 LINE L2 3263 3307 -6 2933 172 50 19 chr18 38187394 38187976 -48489572 - MER7C DNA MER2_type -1 601 2 2049 109 32 0 chr18 38188255 38188538 -48489010 + AluSc SINE Alu 1 292 -17 617 241 5 64 chr18 38189260 38189447 -48488101 - MER5B DNA MER1_type -2 176 1 1505 249 85 13 chr18 38190642 38191115 -48486433 + MLT1D LTR MaLR 1 505 0 185 284 42 42 chr18 38191122 38191217 -48486331 - L2 LINE L2 -14 3258 3164 2275 93 7 3 chr18 38191899 38192190 -48485358 + AluSq SINE Alu 1 292 -21 2247 143 47 10 chr18 38192683 38193135 -48484413 - MER49 LTR ERV1 0 923 404 2079 75 15 4 chr18 38193135 38193400 -48484148 - AluY SINE Alu -43 268 1 1917 114 34 17 chr18 38193406 38193704 -48483844 - MER49 LTR ERV1 -616 307 5 200 214 0 0 chr18 38194856 38194898 -48482650 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 189 0 0 0 chr18 38195573 38195594 -48481954 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 955 47 109 0 chr18 38195605 38195733 -48481815 - L1MA2 LINE L1 0 6304 6163 668 179 57 7 chr18 38196214 38196354 -48481194 + MER3 DNA MER1_type 5 151 -58 2360 127 36 33 chr18 38196522 38196885 -48480663 + THE1B LTR MaLR 1 364 0 2148 129 134 31 chr18 38197809 38198197 -48479351 + MSTA LTR MaLR 1 428 0 1833 157 23 10 chr18 38198632 38198938 -48478610 + AluJo SINE Alu 1 310 -2 362 216 53 14 chr18 38199207 38199312 -48478236 + L1MC5 LINE L1 7675 7775 -10 265 338 76 16 chr18 38199460 38199640 -48477908 - MER5B DNA MER1_type -7 171 4 2812 179 45 28 chr18 38199950 38200458 -48477090 + MER45B DNA AcHobo 1 517 -523 2042 144 24 56 chr18 38200457 38200611 -48476937 + MER45B DNA AcHobo 629 786 -795 * 2520 70 0 13 chr18 38200611 38200923 -48476625 - AluY SINE Alu -3 308 1 2042 144 24 56 chr18 38200923 38201194 -48476354 + MER45B DNA AcHobo 786 1040 0 432 0 0 0 chr18 38201715 38201763 -48475785 + (CA)n Simple_repeat Simple_repeat 2 49 0 915 182 123 5 chr18 38203143 38203330 -48474218 + MER3 DNA MER1_type 1 209 0 447 305 40 5 chr18 38204722 38204922 -48472626 + L1MC4a LINE L1 5769 5975 -1833 229 234 0 0 chr18 38205095 38205142 -48472406 - MER5B DNA MER1_type -130 48 2 366 304 89 30 chr18 38205169 38205304 -48472244 + MER5A DNA MER1_type 36 178 -11 2304 118 0 0 chr18 38207566 38207870 -48469678 - AluSx SINE Alu -8 304 1 1060 274 106 19 chr18 38208159 38208202 -48469346 - L1MEc LINE L1 -4759 1637 1599 1732 153 3 27 chr18 38208202 38208496 -48469052 - AluJb SINE Alu -9 303 17 1060 274 106 19 chr18 38208496 38208989 -48468559 - L1MEc LINE L1 -4797 1599 1054 440 189 27 45 chr18 38208985 38209096 -48468452 - L1MEc LINE L1 -6252 144 36 * 619 272 43 0 chr18 38209142 38209326 -48468222 - L1ME LINE L1 -5846 224 33 2190 109 0 0 chr18 38209519 38209804 -48467744 - AluSc SINE Alu -24 285 1 30 59 0 0 chr18 38209817 38209868 -48467680 + AT_rich Low_complexity Low_complexity 1 51 0 1658 141 44 60 chr18 38209869 38210188 -48467360 - L1MA7 LINE L1 -6 6285 5972 418 342 181 26 chr18 38210247 38210595 -48466953 - HAL1 LINE L1 -993 1514 1113 477 194 0 119 chr18 38210751 38210885 -48466663 - AluJo/FRAM SINE Alu -1 311 194 * 747 196 0 15 chr18 38210872 38211005 -48466543 - FAM SINE Alu -54 131 1 324 264 14 0 chr18 38212156 38212228 -48465320 - L2 LINE L2 0 3313 3241 1885 167 0 3 chr18 38213449 38213760 -48463788 + AluSg SINE Alu 1 310 0 1168 256 65 47 chr18 38214380 38214829 -48462719 + L1ME1 LINE L1 5675 6131 -35 1689 195 91 32 chr18 38214829 38215203 -48462345 + MSTD LTR MaLR 1 396 0 6461 233 99 24 chr18 38215205 38216818 -48460730 + MSTD-int LTR MaLR 2 1735 0 1535 180 163 31 chr18 38216818 38217168 -48460380 + MSTD LTR MaLR 1 396 0 939 105 23 0 chr18 38217684 38217817 -48459731 + MER85 DNA T2_type 3 138 -1 287 208 14 0 chr18 38218530 38218602 -48458946 - L1MCc LINE L1 -4926 2196 2124 1303 268 86 31 chr18 38218657 38219475 -48458073 - L1MCc LINE L1 -4897 1526 1047 1597 207 36 14 chr18 38219489 38219846 -48457702 + MLT1A1 LTR MaLR 1 365 0 1467 244 33 44 chr18 38219930 38220381 -48457167 - L1MCc LINE L1 -5947 476 31 2280 130 3 48 chr18 38221140 38221493 -48456055 + MER1B DNA MER1_type 1 337 0 180 0 0 0 chr18 38222149 38222169 -48455379 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1409 202 11 14 chr18 38222178 38222455 -48455093 - AluJb SINE Alu -36 276 1 261 247 0 0 chr18 38223099 38223172 -48454376 + (TA)n Simple_repeat Simple_repeat 2 74 0 811 328 51 33 chr18 38223490 38224209 -48453339 - L1PA13 LINE L1 -5276 1511 71 186 48 24 48 chr18 38224222 38224264 -48453284 + (TTTTA)n Simple_repeat Simple_repeat 2 42 0 2500 38 0 0 chr18 38224265 38224554 -48452994 - L1PA3 LINE L1 -24 6131 5843 564 265 13 26 chr18 38225031 38225182 -48452366 + MER58A DNA MER1_type 28 176 -48 218 219 27 27 chr18 38225465 38225538 -48452010 + T-rich Low_complexity Low_complexity 6 78 0 5617 75 17 6 chr18 38226077 38226788 -48450760 - L1PA8A LINE L1 0 6131 5413 518 218 0 18 chr18 38226790 38226900 -48450648 + L1 LINE L1 4643 4750 -1396 388 345 181 26 chr18 38227095 38227443 -48450105 - HAL1 LINE L1 -993 1514 1113 477 141 0 39 chr18 38227618 38227696 -48449852 - 7SLRNA srpRNA srpRNA -10 310 236 747 196 0 15 chr18 38227720 38227853 -48449695 - FAM SINE Alu -54 131 1 324 264 14 0 chr18 38229005 38229077 -48448471 - L2 LINE L2 0 3313 3241 2569 81 0 0 chr18 38230298 38230608 -48446940 + AluSg SINE Alu 1 310 0 222 308 87 10 chr18 38231480 38231584 -48445964 - L3 LINE CR1 -3 1574 1463 2301 69 0 0 chr18 38232103 38232378 -48445170 + AluY SINE Alu 21 295 -16 193 224 121 17 chr18 38232848 38232906 -48444642 + MIR SINE MIR 42 105 -103 213 400 0 0 chr18 38235482 38235552 -48441996 - L2 LINE L2 0 3272 3203 226 229 71 14 chr18 38235584 38235654 -48441894 + MLT1L LTR MaLR 1 74 -541 5050 163 52 18 chr18 38235873 38236707 -48440841 + MER21B LTR ERV1 1 862 -1 280 214 102 10 chr18 38236791 38236889 -48440659 + MLT1J LTR MaLR 399 505 -6 285 314 131 9 chr18 38236919 38237148 -48440400 - L2 LINE L2 -1205 2109 1853 871 210 80 5 chr18 38237199 38237399 -48440149 + MER58A DNA MER1_type 10 224 0 182 221 0 147 chr18 38237776 38237844 -48439704 + MIR3 SINE MIR 97 154 -54 306 336 0 38 chr18 38238233 38238364 -48439184 - MIR3 SINE MIR -5 203 78 21 0 0 0 chr18 38239552 38239573 -48437975 + AT_rich Low_complexity Low_complexity 1 21 0 690 168 0 92 chr18 38239581 38239712 -48437836 - FLAM_A SINE Alu -10 123 5 2163 98 0 36 chr18 38240339 38240644 -48436904 - AluY SINE Alu -17 294 1 834 291 103 66 chr18 38240644 38241205 -48436343 - L2 LINE L2 -163 3150 2558 788 159 0 43 chr18 38242390 38242528 -48435020 + FLAM_A SINE Alu 1 132 -1 234 65 0 0 chr18 38243381 38243412 -48434136 + L1M4 LINE L1 5442 5472 -702 816 218 80 5 chr18 38243432 38243620 -48433928 + MER58A DNA MER1_type 7 208 -16 865 243 48 0 chr18 38243866 38244117 -48433431 - L1MEc LINE L1 -4284 2112 1850 4185 174 82 12 chr18 38244124 38245553 -48431995 - L1MB7 LINE L1 -19 6165 4635 775 221 27 53 chr18 38245553 38245816 -48431732 - L1MB7 LINE L1 -1731 4415 4160 4724 242 85 44 chr18 38245817 38246244 -48431304 - L1MEc LINE L1 -4536 1860 1452 2180 104 0 0 chr18 38246244 38246531 -48431017 - AluSg SINE Alu -19 291 5 4724 242 85 44 chr18 38246531 38247865 -48429683 - L1MEc LINE L1 -4944 1452 27 1822 130 38 20 chr18 38247961 38248253 -48429295 - AluSg SINE Alu -13 297 1 840 275 130 41 chr18 38248340 38248733 -48428815 - LTR16B LTR ERVL -3 461 34 275 312 0 11 chr18 38248918 38249011 -48428537 - L1M4 LINE L1 -1221 4925 4834 877 248 42 5 chr18 38249083 38249297 -48428251 - MER58A DNA MER1_type -2 222 1 301 291 89 19 chr18 38249343 38249501 -48428047 - L1ME3A LINE L1 -233 5937 5769 883 240 222 13 chr18 38249533 38250042 -48427506 - LTR50 LTR ERVL -80 715 24 234 226 69 59 chr18 38250067 38250169 -48427379 - L1ME LINE L1 -360 5804 5702 21 0 0 0 chr18 38250169 38250190 -48427358 + AT_rich Low_complexity Low_complexity 1 21 0 38 85 0 0 chr18 38250504 38250598 -48426950 + AT_rich Low_complexity Low_complexity 1 94 0 182 360 34 20 chr18 38250649 38250796 -48426752 + L2 LINE L2 2259 2407 -907 511 286 165 18 chr18 38251035 38251259 -48426289 + MIR SINE MIR 3 259 -3 317 204 159 0 chr18 38253058 38253146 -48424402 + L1M4 LINE L1 5204 5305 -841 503 252 72 0 chr18 38253198 38253337 -48424211 + L1M4 LINE L1 4757 4905 -1241 745 262 44 44 chr18 38253972 38254266 -48423282 - L1ME2 LINE L1 -13 6151 5858 2633 241 68 31 chr18 38254272 38256512 -48421036 - L1MB4 LINE L1 -9 6171 3702 984 171 59 18 chr18 38256526 38256748 -48420800 - L1MB2 LINE L1 -2 6169 5939 1184 227 115 17 chr18 38256777 38257310 -48420238 - L1MB5 LINE L1 -1 6173 5565 511 280 106 32 chr18 38257607 38257825 -48419723 - MIR SINE MIR -10 252 19 225 151 19 19 chr18 38258147 38258200 -48419348 + A-rich Low_complexity Low_complexity 2 54 0 182 154 62 19 chr18 38258350 38258512 -48419036 + (TA)n Simple_repeat Simple_repeat 2 170 0 1235 189 35 0 chr18 38259564 38259791 -48417757 - MER46A DNA MER2_type 0 236 2 453 261 283 0 chr18 38260096 38260234 -48417314 + MER5A DNA MER1_type 13 189 0 351 198 133 46 chr18 38260248 38260384 -48417164 + MIR SINE MIR 45 189 -63 207 317 58 42 chr18 38260558 38260678 -48416870 + L3b LINE CR1 1121 1242 -341 1131 58 0 0 chr18 38260714 38260853 -48416695 + AluY SINE Alu 152 290 -21 5092 148 25 18 chr18 38260912 38261802 -48415746 - MER4D LTR ERV1 0 903 8 2270 102 0 0 chr18 38261931 38262235 -48415313 - AluSc SINE Alu 0 309 6 2217 80 14 0 chr18 38262235 38262522 -48415026 - AluSp SINE Alu -15 298 8 6109 220 37 24 chr18 38263590 38265202 -48412346 - Zaphod DNA AcHobo -2293 1738 105 2306 98 0 0 chr18 38265203 38265500 -48412048 - AluSg SINE Alu -13 297 1 2082 59 4 0 chr18 38265510 38265764 -48411784 - AluY SINE Alu -21 290 36 299 313 10 0 chr18 38265765 38265861 -48411687 - L1MC5 LINE L1 -554 7407 7311 647 278 31 31 chr18 38266026 38266186 -48411362 - L1MC4 LINE L1 -778 7264 7105 2114 102 0 7 chr18 38266186 38266479 -48411069 - AluSq SINE Alu -6 307 17 647 278 31 31 chr18 38266479 38266638 -48410910 - L1MC4 LINE L1 -936 7106 6945 1100 114 44 0 chr18 38266639 38266797 -48410751 - AluSg/x SINE Alu -18 294 130 2253 95 10 0 chr18 38266802 38267106 -48410442 - AluSc SINE Alu -2 307 1 542 248 13 40 chr18 38267106 38267255 -48410293 - L1MC4 LINE L1 -1088 6954 6810 2969 165 36 85 chr18 38269281 38270001 -48407547 - L1MB7 LINE L1 0 6184 5500 2381 190 69 19 chr18 38270105 38271018 -48406530 - L1MB5 LINE L1 -3 6675 5661 660 209 5 61 chr18 38271052 38271248 -48406300 - L1MB5 LINE L1 -1734 4910 4726 2231 149 62 0 chr18 38271248 38271636 -48405912 - MER44D DNA MER2_type 0 605 139 5502 224 36 8 chr18 38271636 38273152 -48404396 - L1MB5 LINE L1 -1984 4660 3102 3453 105 14 2 chr18 38273154 38273638 -48403910 + LTR3b LTR ERVK 1 490 -10 340 73 0 0 chr18 38273644 38273685 -48403863 + LTR3b LTR ERVK 460 500 0 1244 225 59 80 chr18 38273699 38274477 -48403071 - L1MB5 LINE L1 -3558 3086 2293 2134 113 16 7 chr18 38274477 38274786 -48402762 - AluSx SINE Alu 0 312 1 1244 225 59 80 chr18 38274786 38274799 -48402749 - L1MB5 LINE L1 -4351 2293 2281 2054 165 29 18 chr18 38274799 38275181 -48402367 + MLT1B LTR MaLR 3 388 -2 1244 225 59 80 chr18 38275181 38275464 -48402084 - L1MB5 LINE L1 -4363 2281 1913 3561 206 29 35 chr18 38275477 38276746 -48400802 - L1MB5 LINE L1 0 6174 4916 3606 243 60 31 chr18 38276746 38278591 -48398957 - L1MB5 LINE L1 -4728 1918 12 1573 250 38 24 chr18 38278615 38279192 -48398356 - L1MB5 LINE L1 -3284 2862 2278 * 2193 196 63 18 chr18 38279191 38279681 -48397867 - L1MD3 LINE L1 -8 7987 7476 523 172 0 0 chr18 38280096 38280189 -48397359 - AluJ/FLAM SINE Alu -219 93 1 534 259 136 28 chr18 38280220 38280888 -48396660 - L1M4 LINE L1 -2965 3181 2442 254 196 0 0 chr18 38281136 38281187 -48396361 - L1MD3 LINE L1 -17 7978 7928 * 647 185 96 11 chr18 38281184 38281362 -48396186 + L1MB7 LINE L1 5992 6184 0 * 1233 219 113 28 chr18 38281358 38282104 -48395444 - L1MD3 LINE L1 -53 7942 7049 1497 220 7 7 chr18 38282104 38282408 -48395140 - AluJb SINE Alu -6 306 3 1233 219 113 28 chr18 38282408 38282425 -48395123 - L1MD3 LINE L1 -946 7049 7035 4655 255 141 26 chr18 38282482 38284744 -48392804 - L1MD2 LINE L1 -13 6346 3554 1786 57 0 0 chr18 38284744 38284955 -48392593 - AluY SINE Alu -15 296 86 4655 255 141 26 chr18 38284955 38285946 -48391602 - L1MD2 LINE L1 -2805 3554 2679 206 333 146 0 chr18 38287272 38287395 -48390153 + L3 LINE CR1 1 141 -1436 2130 128 40 93 chr18 38287487 38287939 -48389609 + MSTA LTR MaLR 1 428 0 228 264 14 0 chr18 38288138 38288210 -48389338 + A-rich Low_complexity Low_complexity 4 76 0 236 297 109 25 chr18 38288580 38288782 -48388766 + L3b LINE CR1 1162 1380 -203 21 36 0 0 chr18 38289341 38289369 -48388179 + AT_rich Low_complexity Low_complexity 1 28 0 192 77 0 0 chr18 38289476 38289502 -48388046 + (T)n Simple_repeat Simple_repeat 1 26 0 2171 87 0 10 chr18 38290305 38290604 -48386944 - AluSc SINE Alu -13 296 1 23 54 0 0 chr18 38290882 38290919 -48386629 + AT_rich Low_complexity Low_complexity 1 37 0 869 221 231 10 chr18 38291066 38291369 -48386179 - L1MD3 LINE L1 -83 7912 7543 548 292 12 12 chr18 38291585 38291753 -48385795 + L1MCc LINE L1 1121 1288 -5135 * 754 202 67 6 chr18 38291752 38291930 -48385618 - L1MC4a LINE L1 -401 7407 7219 326 131 49 0 chr18 38291933 38291994 -48385554 - L1MC4a LINE L1 -856 6952 6889 1290 247 157 26 chr18 38292684 38293263 -48384285 + L1MCc LINE L1 811 1465 -4958 285 211 0 0 chr18 38293266 38293323 -48384225 - MLT1F1 LTR MaLR 0 567 511 650 244 94 51 chr18 38293550 38293825 -48383723 - MLT1-int LTR MaLR -769 602 316 538 284 78 22 chr18 38293827 38294059 -48383489 - MLT1F LTR MaLR -297 245 1 30592 110 14 65 chr18 38294133 38298105 -48379443 - L1PA7 LINE L1 -2 6152 2642 2428 69 0 3 chr18 38298105 38298408 -48379140 - AluY SINE Alu -9 302 1 30592 110 14 65 chr18 38298408 38300917 -48376631 - L1PA7 LINE L1 -3512 2642 9 1604 225 64 44 chr18 38300920 38301530 -48376018 - L1M4 LINE L1 -1896 4250 3629 2882 189 45 22 chr18 38301926 38302566 -48374982 - L1MB8 LINE L1 -53 6125 5471 608 214 0 0 chr18 38302567 38302684 -48374864 - Tigger7 DNA MER2_type -613 120 4 1873 202 75 28 chr18 38303648 38304074 -48373474 + Tigger4(Zombi) DNA MER2_type 6 451 -2280 462 200 0 0 chr18 38304063 38304148 -48373400 + Tigger4(Zombi) DNA MER2_type 2646 2730 -1 * 23 33 0 0 chr18 38304383 38304413 -48373135 + AT_rich Low_complexity Low_complexity 1 30 0 208 420 18 0 chr18 38304450 38304562 -48372986 - MIR3 SINE MIR -9 199 86 21 82 0 0 chr18 38305549 38305598 -48371950 + AT_rich Low_complexity Low_complexity 1 49 0 2290 98 3 0 chr18 38306161 38306458 -48371090 - AluSq SINE Alu -15 298 1 273 29 0 0 chr18 38306941 38306975 -48370573 + (TG)n Simple_repeat Simple_repeat 2 35 0 597 226 53 0 chr18 38308665 38308798 -48368750 + MER58B DNA MER1_type 195 334 -7 27 0 0 0 chr18 38309222 38309249 -48368299 + AT_rich Low_complexity Low_complexity 1 27 0 325 283 89 37 chr18 38309971 38310153 -48367395 + MIR SINE MIR 23 214 -48 183 42 0 0 chr18 38310469 38310493 -48367055 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 204 125 0 0 chr18 38310649 38310681 -48366867 + (T)n Simple_repeat Simple_repeat 1 32 0 718 333 114 28 chr18 38310740 38310834 -48366714 + L1M4 LINE L1 4318 4403 -1743 2185 101 0 7 chr18 38310834 38311121 -48366427 + AluSx SINE Alu 7 291 -21 718 333 114 28 chr18 38311121 38311666 -48365882 + L1M4 LINE L1 4403 5012 -1134 3440 108 7 17 chr18 38311751 38312289 -48365259 - L1PB2 LINE L1 -3 6148 5616 612 62 134 18 chr18 38313390 38313502 -48364046 + L1PA16 LINE L1 6033 6157 -9 1311 218 74 3 chr18 38313710 38313881 -48363667 - AluJb SINE Alu -4 308 108 543 43 0 0 chr18 38313881 38313951 -48363597 + (TG)n Simple_repeat Simple_repeat 1 70 0 1311 218 74 3 chr18 38313951 38314063 -48363485 - AluJb SINE Alu -204 108 5 1693 174 7 13 chr18 38314974 38315273 -48362275 - AluJo SINE Alu -15 297 1 1558 179 45 24 chr18 38316133 38316507 -48361041 + MLT1B LTR MaLR 5 386 -4 24 0 0 0 chr18 38318340 38318364 -48359184 + AT_rich Low_complexity Low_complexity 1 24 0 306 323 24 30 chr18 38319005 38319172 -48358376 - MLT1J LTR MaLR -27 484 319 1035 254 73 37 chr18 38319234 38319643 -48357905 - L1M4 LINE L1 -1774 4441 4018 281 330 0 39 chr18 38319735 38319838 -48357710 + L2 LINE L2 3174 3272 0 664 183 71 36 chr18 38322571 38322760 -48354788 - L1 LINE L1 -1017 5129 4935 19901 114 9 14 chr18 38323742 38326774 -48350774 + L1P LINE L1 214 3230 -2916 464 264 193 15 chr18 38327595 38327792 -48349756 - MIR SINE MIR -5 257 26 319 286 126 8 chr18 38329008 38329127 -48348421 - L2 LINE L2 -12 3301 3169 21 36 0 0 chr18 38329375 38329403 -48348145 + AT_rich Low_complexity Low_complexity 1 28 0 186 133 0 0 chr18 38330192 38330222 -48347326 + (A)n Simple_repeat Simple_repeat 1 30 0 432 322 20 13 chr18 38330915 38331067 -48346481 - MIR3 SINE MIR -36 172 20 1568 183 36 15 chr18 38331158 38331547 -48346001 + L1 LINE L1 3121 3517 -2629 434 311 16 27 chr18 38332763 38332946 -48344602 + MIR SINE MIR 79 259 -3 438 234 179 55 chr18 38333038 38333183 -48344365 + MER5A DNA MER1_type 13 175 -14 1476 249 123 22 chr18 38333434 38334262 -48343286 - L1MEc LINE L1 -3524 2691 1783 1907 149 3 3 chr18 38334262 38334592 -48342956 - AluSx SINE Alu 0 330 1 1476 249 123 22 chr18 38334592 38334756 -48342792 - L1MEc LINE L1 -4432 1783 1637 2326 209 68 7 chr18 38334996 38335569 -48341979 - L1MC3 LINE L1 -1217 6568 5961 5846 159 15 21 chr18 38335674 38336812 -48340736 - L1 LINE L1 -1135 5011 3881 21 71 0 0 chr18 38336838 38336880 -48340668 + AT_rich Low_complexity Low_complexity 1 42 0 409 294 176 0 chr18 38337172 38337325 -48340223 - MER5A DNA MER1_type 0 189 10 3144 159 39 15 chr18 38337616 38338683 -48338865 - L1P4 LINE L1 -383 5783 4685 1693 278 36 28 chr18 38338725 38339368 -48338180 - L1MEc LINE L1 -5711 685 38 2297 90 0 3 chr18 38339568 38339867 -48337681 - AluY SINE Alu -13 298 1 860 123 0 0 chr18 38340097 38340219 -48337329 - AluSp/q SINE Alu -19 294 173 214 308 87 10 chr18 38342073 38342177 -48335371 - L3 LINE CR1 -3 1574 1463 2287 69 0 0 chr18 38342696 38342971 -48334577 + AluY SINE Alu 21 295 -16 188 224 121 17 chr18 38343442 38343500 -48334048 + MIR SINE MIR 42 105 -103 213 400 0 0 chr18 38346076 38346146 -48331402 - L2 LINE L2 0 3272 3203 226 229 71 14 chr18 38346178 38346248 -48331300 + MLT1L LTR MaLR 1 74 -541 4962 162 51 26 chr18 38346467 38347308 -48330240 + MER21B LTR ERV1 1 862 -1 280 214 102 10 chr18 38347392 38347490 -48330058 + MLT1J LTR MaLR 399 505 -6 285 314 131 9 chr18 38347520 38347749 -48329799 - L2 LINE L2 -1205 2109 1853 871 210 80 5 chr18 38347800 38348000 -48329548 + MER58A DNA MER1_type 10 224 0 182 221 0 147 chr18 38348377 38348445 -48329103 + MIR3 SINE MIR 97 154 -54 306 336 0 38 chr18 38348834 38348965 -48328583 - MIR3 SINE MIR -5 203 78 21 0 0 0 chr18 38350154 38350175 -48327373 + AT_rich Low_complexity Low_complexity 1 21 0 690 168 0 92 chr18 38350183 38350314 -48327234 - FLAM_A SINE Alu -10 123 5 2254 92 0 17 chr18 38350937 38351230 -48326318 - AluSg SINE Alu -17 293 6 553 278 22 38 chr18 38351649 38351749 -48325799 + MIR SINE MIR 3 99 -141 1643 178 16 25 chr18 38351749 38352064 -48325484 - AluJo SINE Alu 0 312 1 553 278 22 38 chr18 38352064 38352143 -48325405 + MIR SINE MIR 99 178 -62 373 336 95 9 chr18 38352208 38352419 -48325129 + L2 LINE L2 2642 2870 -444 313 152 2 0 chr18 38352692 38352748 -48324800 + Alu SINE Alu 248 296 -4 260 238 24 83 chr18 38352750 38352834 -48324714 + L2 LINE L2 3194 3272 0 1052 121 22 55 chr18 38354050 38354232 -48323316 + MLT1C LTR MaLR 1 176 -291 356 270 50 0 chr18 38354211 38354311 -48323237 + AluJb SINE Alu 100 204 -98 * 231 342 17 86 chr18 38354445 38354562 -48322986 + MIR SINE MIR 17 125 -83 401 267 40 0 chr18 38354904 38355005 -48322543 - MIR SINE MIR -60 202 98 568 267 94 28 chr18 38355327 38355815 -48321733 + MLT1F1 LTR MaLR 1 567 0 748 301 78 39 chr18 38356445 38356804 -48320744 + MER68 LTR ERV1 190 562 0 1797 137 18 28 chr18 38356943 38357228 -48320320 - AluJo SINE Alu -30 282 1 1591 185 73 22 chr18 38357372 38357790 -48319758 - MLT1E2 LTR MaLR -7 619 204 2777 10 0 0 chr18 38357790 38358089 -48319459 - AluY SINE Alu -12 299 1 1591 185 73 22 chr18 38358089 38358213 -48319335 - MLT1E2 LTR MaLR -422 204 88 3718 180 98 40 chr18 38358247 38359481 -48318067 - L1MB7 LINE L1 0 6184 5023 2422 76 0 0 chr18 38359481 38359785 -48317763 + AluY SINE Alu 1 304 -7 3718 180 98 40 chr18 38359785 38359894 -48317654 - L1MB7 LINE L1 -1161 5023 4922 751 121 106 0 chr18 38359894 38360026 -48317522 - L1MB3 LINE L1 0 6183 6038 3718 180 98 40 chr18 38360026 38360364 -48317184 - L1MB7 LINE L1 -1262 4922 4605 1761 147 45 3 chr18 38360364 38360650 -48316898 - AluJo SINE Alu -9 303 6 3718 180 98 40 chr18 38360650 38360735 -48316813 - L1MB7 LINE L1 -1579 4605 4526 342 0 0 0 chr18 38360735 38360773 -48316775 + (TG)n Simple_repeat Simple_repeat 1 38 0 3718 180 98 40 chr18 38360773 38360937 -48316611 - L1MB7 LINE L1 -1658 4526 4082 340 146 0 0 chr18 38360938 38360993 -48316555 + MER68 LTR ERV1 3 57 -505 547 222 19 0 chr18 38361009 38361117 -48316431 + MER68 LTR ERV1 453 562 0 896 194 45 53 chr18 38361119 38361366 -48316182 - L1MB7 LINE L1 -2063 4083 3839 716 192 32 0 chr18 38361372 38361497 -48316051 - FLAM_A SINE Alu -4 129 1 869 244 101 37 chr18 38361556 38361988 -48315560 - L2 LINE L2 -117 3196 2732 302 345 61 20 chr18 38361975 38362123 -48315425 + L2 LINE L2 2941 3094 -178 * 1921 62 156 4 chr18 38362255 38362512 -48315036 + AluSq SINE Alu 1 296 -7 24 53 0 0 chr18 38363344 38363382 -48314166 + GC_rich Low_complexity Low_complexity 1 38 0 416 137 0 0 chr18 38366295 38366368 -48311180 - MER2 DNA MER2_type -134 211 139 2091 113 7 13 chr18 38366635 38366937 -48310611 + AluSg SINE Alu 1 300 -10 348 247 11 32 chr18 38367040 38367133 -48310415 - L2 LINE L2 -41 3272 3182 452 204 127 42 chr18 38367244 38367386 -48310162 - MIR SINE MIR -72 190 37 10459 216 35 32 chr18 38368338 38372985 -48304563 + L1M2 LINE L1 201 4859 -1989 240 35 0 0 chr18 38423043 38423072 -48254476 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2149 97 0 4 chr18 38423072 38423351 -48254197 - AluSx SINE Alu -34 278 1 10037 220 33 22 chr18 38424187 38428921 -48248627 + L1M2 LINE L1 251 5036 -1812 928 160 110 55 chr18 38428936 38429136 -48248412 - AluJo SINE Alu -1 311 101 982 256 211 7 chr18 38429828 38430273 -48247275 - L1ME1 LINE L1 0 6166 5631 980 254 38 14 chr18 38430273 38430564 -48246984 - L2 LINE L2 -700 2614 2317 2124 125 0 0 chr18 38431318 38431613 -48245935 - AluSg SINE Alu -15 295 1 415 274 65 55 chr18 38431885 38432086 -48245462 - MLT1J LTR MaLR -51 460 258 886 229 55 0 chr18 38432091 38432292 -48245256 - MER20 DNA MER1_type 0 219 8 401 255 88 65 chr18 38432378 38432594 -48244954 - MLT1J LTR MaLR -290 221 1 1551 276 51 51 chr18 38432810 38433618 -48243930 - L1ME LINE L1 -4981 1089 282 385 270 99 13 chr18 38433854 38434006 -48243542 - L1ME LINE L1 -5882 188 24 1459 49 38 0 chr18 38435063 38435248 -48242300 + L1PA5 LINE L1 5961 6152 -2 22 0 0 0 chr18 38435267 38435289 -48242259 + AT_rich Low_complexity Low_complexity 1 22 0 521 174 0 0 chr18 38435607 38435699 -48241849 - L1MA4A LINE L1 -24 6279 6188 4455 140 21 14 chr18 38435702 38436497 -48241051 - L1MA4A LINE L1 -181 6122 5322 5775 106 0 0 chr18 38436530 38437429 -48240119 - L1PB1 LINE L1 -1 6150 5231 3534 201 16 5 chr18 38437438 38438260 -48239288 + L1PB1 LINE L1 4401 5231 -915 2295 226 36 22 chr18 38438253 38438890 -48238658 - L1MA4A LINE L1 -814 5332 4687 * 2358 242 49 60 chr18 38438990 38439165 -48238383 - L1M4c LINE L1 -4069 2756 2581 282 29 0 0 chr18 38439165 38439200 -48238348 + (TG)n Simple_repeat Simple_repeat 2 36 0 2358 242 49 60 chr18 38439200 38439404 -48238144 - L1M4c LINE L1 -4244 2581 2376 1521 175 88 0 chr18 38439404 38439571 -48237977 - AluJb SINE Alu -2 310 159 248 0 31 0 chr18 38439571 38439603 -48237945 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 1521 175 88 0 chr18 38439603 38439720 -48237828 - AluJb SINE Alu -153 159 1 2358 242 49 60 chr18 38439720 38441023 -48236525 - L1M4c LINE L1 -4449 2376 894 286 296 38 48 chr18 38441211 38441397 -48236151 - L1M4c LINE L1 -5811 731 548 2146 103 3 17 chr18 38442038 38442338 -48235210 + AluSg1 SINE Alu 1 296 -13 335 174 11 65 chr18 38443631 38443723 -48233825 - MER5C DNA MER1_type 0 324 238 21 0 0 0 chr18 38444173 38444194 -48233354 + AT_rich Low_complexity Low_complexity 1 21 0 1688 109 101 4 chr18 38444371 38444619 -48232929 + AluSx SINE Alu 1 272 -40 238 375 87 60 chr18 38444964 38445377 -48232171 + L2 LINE L2 2813 3236 -36 319 286 126 8 chr18 38446563 38446682 -48230866 - L2 LINE L2 -12 3301 3169 21 36 0 0 chr18 38446930 38446958 -48230590 + AT_rich Low_complexity Low_complexity 1 28 0 186 133 0 0 chr18 38447747 38447777 -48229771 + (A)n Simple_repeat Simple_repeat 1 30 0 432 322 20 13 chr18 38448470 38448622 -48228926 - MIR3 SINE MIR -36 172 20 8790 211 18 10 chr18 38448713 38449284 -48228264 + L1 LINE L1 3121 3686 -2460 2092 116 7 3 chr18 38449284 38449578 -48227970 + AluSx SINE Alu 1 295 -17 8790 211 18 10 chr18 38449578 38451084 -48226464 + L1 LINE L1 3686 5215 -931 1100 129 3 18 chr18 38451085 38451404 -48226144 - THE1C LTR MaLR -1 374 1 4894 169 10 9 chr18 38451418 38452334 -48225214 + L1PA16 LINE L1 5227 6142 -24 241 280 27 0 chr18 38453717 38453792 -48223756 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 2034 135 28 0 chr18 38454177 38454466 -48223082 - AluSx SINE Alu -15 297 1 1179 202 17 97 chr18 38454783 38454951 -48222597 + MER58B DNA MER1_type 6 131 -2289 2426 68 0 26 chr18 38454951 38455258 -48222290 - AluY SINE Alu -12 299 1 1179 202 17 97 chr18 38455258 38455450 -48222098 + MER58B DNA MER1_type 131 337 -4 2001 162 60 0 chr18 38455451 38455803 -48221745 - MER83C LTR ERV1 0 373 1 550 239 31 0 chr18 38455821 38455951 -48221597 + L1ME3A LINE L1 5812 5945 -225 2030 127 7 3 chr18 38455954 38456245 -48221303 + AluSx SINE Alu 1 292 -20 201 74 0 0 chr18 38456253 38456280 -48221268 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 292 288 58 42 chr18 38456339 38456530 -48221018 + L1ME3A LINE L1 5962 6155 -15 385 244 206 0 chr18 38456625 38456756 -48220792 + MIR SINE MIR 84 241 -21 6778 46 41 0 chr18 38456776 38457698 -48219850 + L1PA7 LINE L1 5202 6158 0 1184 227 3 17 chr18 38457865 38458156 -48219392 + L1ME1 LINE L1 5340 5626 -536 255 41 82 20 chr18 38458188 38458237 -48219311 + MADE1 DNA Mariner 28 79 -1 887 271 38 14 chr18 38458717 38459008 -48218540 + L2 LINE L2 2317 2614 -700 1237 224 206 7 chr18 38459008 38459454 -48218094 + L1ME1 LINE L1 5631 6165 -1 237 376 68 0 chr18 38460704 38460837 -48216711 + MIR SINE MIR 20 161 -101 12764 206 29 20 chr18 38460841 38461950 -48215598 - L1PA16 LINE L1 -2 6867 5770 2095 116 159 5 chr18 38461950 38462321 -48215227 - MSTA LTR MaLR 0 428 1 12764 206 29 20 chr18 38462321 38462391 -48215157 - L1PA16 LINE L1 -1099 5770 5702 189 0 0 0 chr18 38462391 38462412 -48215136 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1887 96 0 0 chr18 38462415 38462655 -48214893 - AluSc SINE Alu -31 278 39 12764 206 29 20 chr18 38462655 38467600 -48209948 - L1PA16 LINE L1 -1168 5701 716 2209 122 3 0 chr18 38467611 38467915 -48209633 - AluSx SINE Alu -7 305 1 21 36 0 0 chr18 38468429 38468457 -48209091 + AT_rich Low_complexity Low_complexity 1 28 0 778 80 36 0 chr18 38469157 38469269 -48208279 + LTR9B LTR ERV1 445 560 -84 1928 104 0 8 chr18 38469278 38469537 -48208011 + AluY SINE Alu 30 286 -25 285 29 0 0 chr18 38469550 38469584 -48207964 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 938 188 6 6 chr18 38470521 38470686 -48206862 - FRAM SINE Alu 0 166 2 1155 199 0 13 chr18 38470698 38470924 -48206624 - AluJo SINE Alu -3 309 87 204 40 0 0 chr18 38471274 38471299 -48206249 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1133 167 0 54 chr18 38471303 38471492 -48206056 - L1PA15 LINE L1 -13 6152 5975 1335 206 17 30 chr18 38471492 38471793 -48205755 - AluJo SINE Alu -15 297 1 1133 167 0 54 chr18 38471793 38471825 -48205723 - L1PA15 LINE L1 -190 5975 5943 199 70 23 23 chr18 38471825 38471868 -48205680 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6186 50 1 0 chr18 38471883 38472641 -48204907 - L1PA5 LINE L1 -11 6143 5385 23504 42 9 1 chr18 38472643 38475608 -48201940 + L1PA5 LINE L1 2410 5398 -748 668 150 9 9 chr18 38475601 38475714 -48201834 - L1PA15 LINE L1 -208 5957 5845 * 4647 233 24 3 chr18 38475723 38476880 -48200668 - L1P LINE L1 -1689 4457 3276 1121 163 43 0 chr18 38476884 38477068 -48200480 - AluJb SINE Alu -28 284 93 2622 274 81 31 chr18 38477145 38478179 -48199369 - L1MEc LINE L1 -2419 3796 2816 4123 53 0 0 chr18 38478179 38478691 -48198857 - L1PA6 LINE L1 -2 6152 5641 2622 274 81 31 chr18 38478691 38479380 -48198168 - L1MEc LINE L1 -3399 2816 1977 1869 138 0 43 chr18 38479380 38479685 -48197863 + AluJb SINE Alu 2 293 -19 2622 274 81 31 chr18 38479685 38480018 -48197530 - L1MEc LINE L1 -4238 1977 1662 342 268 88 84 chr18 38480023 38480136 -48197412 - L1MEc LINE L1 -4615 1600 1489 2226 114 3 0 chr18 38480136 38480435 -48197113 - AluSp SINE Alu -13 300 1 342 268 88 84 chr18 38480435 38480571 -48196977 - L1MEc LINE L1 -4726 1489 1350 314 267 63 16 chr18 38480575 38480766 -48196782 - L1MEc LINE L1 -5326 1070 871 587 305 119 35 chr18 38480795 38481414 -48196134 - L1MEc LINE L1 -5578 818 148 1093 185 0 0 chr18 38482743 38482932 -48194616 + MER5A DNA MER1_type 1 189 0 231 231 0 31 chr18 38483386 38483451 -48194097 + CT-rich Low_complexity Low_complexity 1 63 0 407 264 116 37 chr18 38484866 38485082 -48192466 + L2 LINE L2 3080 3312 -1 893 104 0 0 chr18 38485097 38485212 -48192336 + AluSq/x SINE Alu 2 116 -197 1565 154 12 102 chr18 38485216 38485314 -48192234 - LTR9 LTR ERV1 -299 313 208 2317 99 0 0 chr18 38485314 38485618 -48191930 + AluY SINE Alu 1 304 -7 1565 154 12 102 chr18 38485618 38485863 -48191685 - LTR9 LTR ERV1 -404 208 1 2532 209 42 83 chr18 38485864 38486878 -48190670 - L1M4 LINE L1 -1698 4448 3476 2333 88 0 7 chr18 38486896 38487204 -48190344 - AluSc SINE Alu -3 306 1 1827 239 62 11 chr18 38487204 38487668 -48189880 - MLT1E2 LTR MaLR -2 624 137 2645 250 74 28 chr18 38487766 38488904 -48188644 - L1M4 LINE L1 -2683 3463 2274 1775 187 104 150 chr18 38489052 38489375 -48188173 + L1ME3 LINE L1 5340 5676 -486 372 58 19 0 chr18 38489375 38489427 -48188121 + MADE1 DNA Mariner 28 80 0 1775 187 104 150 chr18 38489427 38489546 -48188002 + L1ME3 LINE L1 5676 5799 -363 2272 93 3 3 chr18 38489546 38489846 -48187702 + AluSc SINE Alu 1 300 -9 1775 187 104 150 chr18 38489846 38490066 -48187482 + L1ME3 LINE L1 5799 6051 -111 225 154 0 0 chr18 38490066 38490105 -48187443 + MER3 DNA MER1_type 11 49 -160 1775 187 104 150 chr18 38490105 38490213 -48187335 + L1ME3 LINE L1 6051 6162 0 418 250 10 10 chr18 38490691 38490795 -48186753 - MIR SINE MIR 0 262 159 2440 73 0 10 chr18 38491151 38491465 -48186083 - AluY SINE Alu 0 311 1 2495 217 31 66 chr18 38491571 38491747 -48185801 - MLT1E1 LTR MaLR 0 654 473 594 26 0 0 chr18 38491747 38491823 -48185725 - L1PA5 LINE L1 0 6154 6079 2495 217 31 66 chr18 38491823 38492324 -48185224 - MLT1E1 LTR MaLR -181 473 1 21 0 0 0 chr18 38492431 38492452 -48185096 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr18 38492584 38492607 -48184941 + AT_rich Low_complexity Low_complexity 1 23 0 1994 177 63 42 chr18 38493252 38493727 -48183821 + MLT1D LTR MaLR 21 505 0 434 265 185 19 chr18 38494683 38494845 -48182703 + MER5A DNA MER1_type 1 189 0 2326 98 0 0 chr18 38496270 38496565 -48180983 - AluSg1 SINE Alu -11 298 4 227 128 26 0 chr18 38496706 38496745 -48180803 - Looper DNA T2_type -1410 148 109 1053 187 46 21 chr18 38497173 38497487 -48180061 - L1MC/D LINE L1 -743 5797 5590 589 153 53 100 chr18 38497488 38497638 -48179910 - FLAM_C SINE Alu 0 143 1 379 198 35 0 chr18 38497639 38497725 -48179823 - L1MC/D LINE L1 -942 5598 5510 * 955 202 43 35 chr18 38497711 38497969 -48179579 - L1MC/D LINE L1 -2163 4377 4118 1182 142 0 0 chr18 38497971 38498140 -48179408 - AluSg/x SINE Alu -13 297 129 1198 180 11 39 chr18 38498149 38498433 -48179115 - L1MC/D LINE L1 -2427 4113 3838 2966 238 41 14 chr18 38498439 38499287 -48178261 - L1MC/D LINE L1 -2896 3644 2763 1795 98 16 28 chr18 38499287 38499541 -48178007 - AluSx SINE Alu -14 298 48 2966 238 41 14 chr18 38499541 38499693 -48177855 - L1MC/D LINE L1 -3777 2763 2617 1965 154 0 19 chr18 38499759 38500077 -48177471 - AluJb SINE Alu 0 312 1 811 196 168 49 chr18 38500129 38500415 -48177133 - MER2 DNA MER2_type -25 320 1 2239 174 85 120 chr18 38500415 38501347 -48176201 - L1MC/D LINE L1 -4147 2393 1495 2200 90 0 0 chr18 38501363 38501653 -48175895 - L1PA8A LINE L1 -18 6113 5824 571 69 0 0 chr18 38501653 38501725 -48175823 + L1P LINE L1 4927 4998 -1148 216 0 0 0 chr18 38501766 38501790 -48175758 + (A)n Simple_repeat Simple_repeat 1 24 0 297 75 0 0 chr18 38502126 38502166 -48175382 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr18 38502187 38502208 -48175340 + AT_rich Low_complexity Low_complexity 1 21 0 2396 77 0 10 chr18 38502704 38503003 -48174545 - AluY SINE Alu -13 298 3 231 370 67 8 chr18 38503208 38503327 -48174221 - MIR3 SINE MIR -79 129 4 602 239 8 109 chr18 38503802 38504049 -48173499 - L2 LINE L2 0 3313 3092 414 330 36 23 chr18 38504409 38504596 -48172952 + MER5B DNA MER1_type 1 178 0 329 300 57 7 chr18 38505013 38505153 -48172395 - MIR SINE MIR -17 245 99 190 313 31 0 chr18 38505258 38505322 -48172226 + MIR SINE MIR 36 101 -107 576 259 139 6 chr18 38505327 38505493 -48172055 - MIR SINE MIR 0 262 75 352 264 55 60 chr18 38507484 38507692 -48169856 + MIR SINE MIR 5 206 -56 324 0 0 0 chr18 38507782 38507818 -48169730 + (TG)n Simple_repeat Simple_repeat 1 36 0 6163 122 23 36 chr18 38508478 38509783 -48167765 + L1MA6 LINE L1 4825 6109 -191 565 63 0 25 chr18 38509783 38509862 -48167686 + MADE1 DNA Mariner 1 77 -3 6163 122 23 36 chr18 38509862 38510051 -48167497 + L1MA6 LINE L1 6109 6299 -1 240 86 0 0 chr18 38510173 38510208 -48167340 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 2329 96 0 13 chr18 38512906 38513040 -48164508 + AluSc SINE Alu 1 135 -174 1907 91 0 0 chr18 38513040 38513315 -48164233 + AluY SINE Alu 57 311 0 2329 96 0 13 chr18 38513315 38513492 -48164056 + AluSc SINE Alu 135 308 -1 774 281 91 0 chr18 38513585 38513816 -48163732 + MIR SINE MIR 11 262 0 1107 170 10 26 chr18 38515947 38516141 -48161407 - AluJb SINE Alu -20 292 102 1846 134 28 21 chr18 38516359 38516650 -48160898 + AluJo SINE Alu 5 297 -15 239 313 30 0 chr18 38516726 38516825 -48160723 - L1ME1 LINE L1 -4 6162 6061 275 242 15 12 chr18 38516872 38516954 -48160594 - L1ME3 LINE L1 -102 6062 5980 501 304 94 0 chr18 38517006 38517177 -48160371 - MIR SINE MIR -74 188 2 657 276 42 42 chr18 38517379 38517596 -48159952 - MIR SINE MIR -10 252 36 25 0 0 0 chr18 38518241 38518266 -48159282 + AT_rich Low_complexity Low_complexity 1 25 0 303 49 0 0 chr18 38518324 38518365 -48159183 + (CA)n Simple_repeat Simple_repeat 2 42 0 2019 129 0 3 chr18 38518400 38518728 -48158820 + AluSg SINE Alu 1 327 0 214 294 12 24 chr18 38518763 38518848 -48158700 + (CATATA)n Simple_repeat Simple_repeat 6 89 0 21 0 0 0 chr18 38518960 38518981 -48158567 + AT_rich Low_complexity Low_complexity 1 21 0 595 233 110 22 chr18 38519215 38519443 -48158105 - L1ME3 LINE L1 -219 5951 5704 518 249 117 30 chr18 38519443 38519640 -48157908 + MLT1J2 LTR MaLR 1 214 -236 1312 204 29 0 chr18 38519691 38519971 -48157577 - L1 LINE L1 -2195 3951 3664 3310 162 40 49 chr18 38519971 38520807 -48156741 + LTR1 LTR ERV1 1 785 0 819 176 27 11 chr18 38520807 38520995 -48156553 - L1 LINE L1 -2517 3629 3439 701 329 70 43 chr18 38521007 38521324 -48156224 - L1M4 LINE L1 -5996 546 208 1358 116 74 5 chr18 38521324 38521539 -48156009 + MER30 DNA MER1_type 1 230 0 701 329 70 43 chr18 38521539 38521753 -48155795 - L1M4 LINE L1 -6334 208 1 258 208 28 14 chr18 38521749 38521821 -48155727 + L1 LINE L1 3623 3695 -2451 * 436 255 64 7 chr18 38521877 38522018 -48155530 + L1MC4a LINE L1 3878 4026 -2120 1773 98 0 8 chr18 38522035 38522279 -48155269 + AluSq SINE Alu 63 304 -9 1081 148 0 0 chr18 38522279 38522475 -48155073 + AluSp SINE Alu 134 313 0 424 255 48 21 chr18 38522476 38522621 -48154927 + L1MC4a LINE L1 4018 4166 -1980 963 207 62 31 chr18 38522626 38522882 -48154666 + MLT1B LTR MaLR 1 264 -126 742 218 26 0 chr18 38522882 38523038 -48154510 + L1ME2 LINE L1 5997 6156 -8 2125 134 0 3 chr18 38523096 38523403 -48154145 - AluSx SINE Alu -6 306 1 484 216 144 65 chr18 38523612 38523765 -48153783 - L2 LINE L2 -1 3312 3148 364 269 113 0 chr18 38529442 38529583 -48147965 + L1MC4a LINE L1 5484 5640 -481 1243 192 12 28 chr18 38529588 38529843 -48147705 + AluJo SINE Alu 62 312 0 495 252 64 58 chr18 38529848 38530032 -48147516 + L1MC4a LINE L1 5637 5825 -1983 2183 106 13 0 chr18 38530032 38530335 -48147213 - AluSg SINE Alu -3 307 1 495 252 64 58 chr18 38530335 38530463 -48147085 + L1MC4a LINE L1 5825 5951 -1857 22 0 0 0 chr18 38530525 38530547 -48147001 + AT_rich Low_complexity Low_complexity 1 22 0 191 353 100 11 chr18 38530915 38531184 -48146364 + L2 LINE L2 2148 2440 -874 442 324 157 53 chr18 38531338 38531414 -48146134 - L2 LINE L2 -12 3260 3193 2250 70 3 61 chr18 38531414 38531741 -48145807 - AluSp SINE Alu -5 308 1 442 324 157 53 chr18 38531741 38532549 -48144999 - L2 LINE L2 -79 3193 2285 477 228 15 151 chr18 38533549 38533755 -48143793 - MER5B DNA MER1_type 0 178 1 32 0 0 0 chr18 38533989 38534021 -48143527 + AT_rich Low_complexity Low_complexity 1 32 0 485 285 89 39 chr18 38534145 38534482 -48143066 - L1MC5 LINE L1 -1170 6821 6478 987 240 51 29 chr18 38534492 38534804 -48142744 - LTR9 LTR ERV1 0 612 294 2358 78 0 16 chr18 38535001 38535310 -48142238 - AluSg SINE Alu -6 304 1 24 53 0 0 chr18 38535803 38535841 -48141707 + AT_rich Low_complexity Low_complexity 1 38 0 2111 112 14 0 chr18 38535903 38536198 -48141350 - AluSx SINE Alu -13 299 1 198 0 0 0 chr18 38536291 38536313 -48141235 + (TTTTTA)n Simple_repeat Simple_repeat 3 24 0 32038 28 1 0 chr18 38536314 38540919 -48136629 - L1PA4 LINE L1 -3 6152 1541 3587 65 6 0 chr18 38540920 38541400 -48136148 + L1PA4 LINE L1 1056 1538 -4608 1539 224 139 9 chr18 38541391 38541824 -48135724 + L1MDa LINE L1 30 518 -6022 * 1295 214 53 59 chr18 38541821 38542311 -48135237 + L1MDa LINE L1 1016 1502 -5038 * 3255 74 23 0 chr18 38542309 38542856 -48134692 - L1PA8A LINE L1 -649 5482 4926 2200 90 0 0 chr18 38542856 38543145 -48134403 + L1PA8A LINE L1 5824 6113 -18 2243 173 83 121 chr18 38543161 38544095 -48133453 + L1MDa LINE L1 1495 2393 -4147 811 196 168 49 chr18 38544095 38544381 -48133167 + MER2 DNA MER2_type 1 320 -25 1996 147 0 19 chr18 38544433 38544747 -48132801 + AluJb SINE Alu 1 308 -4 303 278 9 0 chr18 38544865 38544973 -48132575 + L1MDa LINE L1 2659 2767 -3773 1666 114 16 28 chr18 38544976 38545230 -48132318 + AluSx SINE Alu 48 298 -14 1943 88 0 4 chr18 38545343 38545592 -48131956 - AluSx SINE Alu -64 248 1 2417 91 0 0 chr18 38546477 38546784 -48130764 - AluSx SINE Alu -5 307 1 311 294 32 24 chr18 38547297 38547423 -48130125 + MIR SINE MIR 83 209 -53 22 0 0 0 chr18 38548412 38548434 -48129114 + AT_rich Low_complexity Low_complexity 1 22 0 404 268 111 44 chr18 38548681 38549158 -48128390 - L1ME4a LINE L1 -44 6077 5569 1924 218 89 62 chr18 38549166 38549894 -48127654 - L1M3e LINE L1 -6282 748 1 389 170 236 0 chr18 38549933 38550039 -48127509 - HAL1 LINE L1 -133 2374 2244 322 267 12 12 chr18 38550059 38550145 -48127403 + CT-rich Low_complexity Low_complexity 2 87 0 1430 180 104 22 chr18 38550317 38550683 -48126865 + L1MA7 LINE L1 5890 6285 -6 1161 278 125 16 chr18 38550689 38551362 -48126186 - HAL1 LINE L1 -599 1908 1163 1787 184 3 7 chr18 38551365 38551669 -48125879 - AluJb SINE Alu -7 305 3 231 253 60 72 chr18 38551676 38551842 -48125706 - HAL1 LINE L1 -1428 1079 916 680 295 126 59 chr18 38551853 38552652 -48124896 - HAL1 LINE L1 -1639 868 16 32 0 0 0 chr18 38552869 38552901 -48124647 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr18 38553070 38553091 -48124457 + AT_rich Low_complexity Low_complexity 1 21 0 2181 133 0 0 chr18 38553683 38553984 -48123564 - AluSx SINE Alu -11 301 1 24 103 0 0 chr18 38554539 38554626 -48122922 + AT_rich Low_complexity Low_complexity 1 87 0 5422 200 30 176 chr18 38555454 38558268 -48119280 + L1MA4A LINE L1 10 2413 -4436 2116 129 0 15 chr18 38558299 38558624 -48118924 - MER1B DNA MER1_type -19 320 1 2898 213 31 15 chr18 38558624 38560399 -48117149 + L1MA4A LINE L1 2413 4289 -2559 * 24710 42 2 0 chr18 38560392 38564381 -48113167 - L1PA4 LINE L1 -2 6153 2158 14036 67 3 0 chr18 38564380 38566251 -48111297 + L1P LINE L1 34 1909 -4237 * 5064 212 63 11 chr18 38566242 38566539 -48111009 + L1MA4A LINE L1 4265 4545 -2460 * 1193 126 70 0 chr18 38566539 38566753 -48110795 + L1PA11 LINE L1 5942 6170 -4 5064 212 63 11 chr18 38566753 38568116 -48109432 + L1MA4A LINE L1 4545 6100 -905 288 0 0 0 chr18 38568116 38568148 -48109400 + (CA)n Simple_repeat Simple_repeat 2 33 0 5064 212 63 11 chr18 38568148 38569099 -48108449 + L1MA4A LINE L1 6100 7000 -5 300 223 68 4 chr18 38569099 38569246 -48108302 + L1MB7 LINE L1 5435 5601 -699 1497 195 40 24 chr18 38569537 38569834 -48107714 + AluJo SINE Alu 6 307 -5 1702 160 34 0 chr18 38569956 38570219 -48107329 + AluSx SINE Alu 1 272 -40 631 301 49 30 chr18 38570324 38570590 -48106958 + AluJo SINE Alu 36 306 -6 1622 200 34 0 chr18 38570719 38571014 -48106534 + AluSq SINE Alu 8 312 -1 27 0 0 0 chr18 38571032 38571059 -48106489 + AT_rich Low_complexity Low_complexity 1 27 0 1802 179 185 8 chr18 38571062 38571492 -48106056 + L1MB7 LINE L1 5599 6130 -54 2069 111 31 0 chr18 38571492 38571781 -48105767 - AluSx SINE Alu -14 298 1 1802 179 185 8 chr18 38571781 38571848 -48105700 + L1MB7 LINE L1 6130 6184 0 1923 160 17 0 chr18 38572031 38572331 -48105217 + AluSx SINE Alu 1 305 -7 1638 197 24 22 chr18 38572474 38572890 -48104658 - L1 LINE L1 -1540 4606 4190 4292 126 32 6 chr18 38572890 38573597 -48103951 + L1PA16 LINE L1 5437 6162 -4 27 49 0 0 chr18 38573614 38573655 -48103893 + AT_rich Low_complexity Low_complexity 1 41 0 216 0 0 0 chr18 38573833 38573857 -48103691 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3709 51 0 0 chr18 38573859 38574311 -48103237 - L1PA6 LINE L1 -11 6143 5692 947 245 78 42 chr18 38576155 38576538 -48101010 - MLT2C1 LTR ERVL 0 397 1 372 147 0 0 chr18 38576546 38576614 -48100934 - ERVL-C1 LTR ERVL -16 5748 5681 38256 72 10 3 chr18 38576622 38582723 -48094825 + L1PA5 LINE L1 4 6152 -2 5642 206 44 16 chr18 38582724 38583070 -48094478 - ERVL-C1 LTR ERVL -78 5686 5351 1672 184 34 3 chr18 38583070 38583364 -48094184 - AluJb SINE Alu -9 303 1 5642 206 44 16 chr18 38583364 38584277 -48093271 - ERVL-C1 LTR ERVL -413 5351 4392 972 232 25 92 chr18 38584310 38584406 -48093142 + L1MD3 LINE L1 6509 6610 -1385 1254 202 46 46 chr18 38584406 38584778 -48092770 - MLT1A2 LTR MaLR 0 374 3 972 232 25 92 chr18 38584778 38585039 -48092509 + L1MD3 LINE L1 6610 6842 -1153 635 170 35 14 chr18 38585050 38585191 -48092357 + L1MD3 LINE L1 7852 7995 0 202 338 42 0 chr18 38586167 38586238 -48091310 - MIR3 SINE MIR -14 194 121 558 54 0 0 chr18 38586486 38586560 -48090988 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 494 325 154 26 chr18 38587187 38587908 -48089640 - L2 LINE L2 -1217 2097 1285 431 299 126 23 chr18 38588045 38588219 -48089329 + MIR SINE MIR 1 192 -70 1151 325 27 46 chr18 38589342 38589926 -48087622 + L2 LINE L2 2430 3000 -313 993 224 34 39 chr18 38590080 38590115 -48087433 + L1ME1 LINE L1 2938 2972 -3174 1896 160 28 0 chr18 38590115 38590403 -48087145 + AluJb SINE Alu 1 296 -16 993 224 34 39 chr18 38590403 38590750 -48086798 + L1ME1 LINE L1 2972 3318 -2828 631 211 75 0 chr18 38590773 38590906 -48086642 + Tigger4(Zombi) DNA MER2_type 1 143 -2588 2557 119 72 8 chr18 38590908 38591377 -48086171 + Tigger4(Zombi) DNA MER2_type 2233 2731 0 2836 226 69 45 chr18 38591380 38592480 -48085068 + L1ME1 LINE L1 3352 4477 -1669 832 167 15 0 chr18 38592496 38592628 -48084920 + AluJo SINE Alu 1 134 -178 1639 209 83 46 chr18 38592638 38593252 -48084296 + L1ME1 LINE L1 4479 5115 -1031 1903 151 3 17 chr18 38593256 38593555 -48083993 + AluSx SINE Alu 1 295 -17 3014 189 18 22 chr18 38593566 38594253 -48083295 + L1ME1 LINE L1 5483 6166 0 313 308 36 41 chr18 38594239 38594460 -48083088 + L1MC/D LINE L1 5581 5800 -2008 * 343 297 42 48 chr18 38594822 38594987 -48082561 + HAL1b LINE L1 728 891 -457 2406 80 0 0 chr18 38595408 38595707 -48081841 + AluSc SINE Alu 2 300 -9 367 364 23 53 chr18 38595707 38596009 -48081539 + L3 LINE CR1 354 646 -931 24 32 0 0 chr18 38596032 38596063 -48081485 + AT_rich Low_complexity Low_complexity 1 31 0 279 250 131 12 chr18 38596113 38596197 -48081351 + MER5A DNA MER1_type 95 188 -1 1429 218 53 53 chr18 38597860 38598122 -48079426 + L1MD2 LINE L1 5693 5953 -213 2040 100 54 0 chr18 38598122 38598401 -48079147 + AluSg SINE Alu 1 294 -16 1429 218 53 53 chr18 38598401 38598595 -48078953 + L1MD2 LINE L1 5953 6126 -40 2407 77 3 0 chr18 38598595 38598894 -48078654 - AluY SINE Alu -11 300 1 1429 218 53 53 chr18 38598894 38598915 -48078633 + L1MD2 LINE L1 6126 6145 -21 1736 183 88 14 chr18 38599047 38599087 -48078461 - Charlie1b DNA MER1_type -2238 523 487 2264 102 3 0 chr18 38599087 38599381 -48078167 - AluSg SINE Alu -15 295 1 1736 183 88 14 chr18 38599381 38599761 -48077787 - Charlie1b DNA MER1_type -2274 487 72 5648 148 53 4 chr18 38599778 38601151 -48076397 - L1PA16 LINE L1 -9 6157 4724 231 335 121 43 chr18 38602341 38603103 -48074445 + L2 LINE L2 1619 2439 -875 226 194 111 14 chr18 38603104 38603176 -48074372 - MIR SINE MIR -1 261 183 662 274 36 24 chr18 38603194 38603446 -48074102 - MIR SINE MIR 0 262 8 2549 63 0 22 chr18 38604016 38604333 -48073215 - AluY SINE Alu -1 310 1 23 54 0 0 chr18 38605651 38605688 -48071860 + AT_rich Low_complexity Low_complexity 1 37 0 183 291 0 0 chr18 38605982 38606037 -48071511 + L2 LINE L2 3211 3265 -7 2750 241 71 15 chr18 38606165 38607127 -48070421 - L1ME1 LINE L1 -5 6230 5215 5105 247 112 38 chr18 38607146 38607250 -48070298 - L1ME1 LINE L1 -1094 5121 5026 2316 108 0 13 chr18 38607250 38607566 -48069982 - AluSx SINE Alu 0 312 1 5105 247 112 38 chr18 38607566 38607673 -48069875 - L1ME1 LINE L1 -1189 5026 4928 308 43 22 0 chr18 38607673 38607719 -48069829 + (CA)n Simple_repeat Simple_repeat 2 48 0 5105 247 112 38 chr18 38607719 38608013 -48069535 - L1ME1 LINE L1 -1287 4928 4657 2020 160 0 0 chr18 38608013 38608325 -48069223 - AluSx SINE Alu 0 312 1 5105 247 112 38 chr18 38608325 38609609 -48067939 - L1ME1 LINE L1 -1558 4657 3469 1546 192 28 3 chr18 38609609 38609900 -48067648 - AluJb SINE Alu -14 298 1 5105 247 112 38 chr18 38609900 38610023 -48067525 - L1ME1 LINE L1 -2746 3469 3356 1366 209 108 0 chr18 38610023 38610301 -48067247 + AluSx SINE Alu 1 308 -4 5105 247 112 38 chr18 38610301 38611154 -48066394 - L1ME1 LINE L1 -2859 3356 2101 3663 117 19 5 chr18 38611154 38611720 -48065828 - L1PA14 LINE L1 0 6161 5588 5105 247 112 38 chr18 38611720 38611915 -48065633 - L1ME1 LINE L1 -4114 2101 1922 1958 200 51 5 chr18 38611930 38612320 -48065228 + MSTB1 LTR MaLR 25 432 0 406 251 45 63 chr18 38612329 38612552 -48064996 - L1ME1 LINE L1 -5303 902 684 796 182 113 0 chr18 38612879 38613038 -48064510 - MER7A DNA MER2_type -1 345 169 6687 72 8 0 chr18 38613048 38614034 -48063514 - L1PA10 LINE L1 -4 6164 5159 3533 143 40 0 chr18 38614034 38614634 -48062914 + L1PA10 LINE L1 4527 5150 -996 908 187 58 0 chr18 38614634 38614805 -48062743 - MER7A DNA MER2_type -167 179 1 3883 245 88 53 chr18 38614860 38615298 -48062250 + L1M4 LINE L1 3160 3581 -2565 1157 136 45 54 chr18 38615298 38615519 -48062029 - MER20 DNA MER1_type 0 219 1 3883 245 88 53 chr18 38615519 38616848 -48060700 + L1M4 LINE L1 3581 4990 -1156 3206 157 18 23 chr18 38617105 38617673 -48059875 - MER34B LTR ERV1 0 565 1 516 257 85 65 chr18 38617793 38617812 -48059736 + L1MC4a LINE L1 6441 6458 -1503 2544 192 27 62 chr18 38617812 38618446 -48059102 + LTR9 LTR ERV1 1 612 0 516 257 85 65 chr18 38618446 38618793 -48058755 + L1MC4a LINE L1 6458 6791 -1170 189 0 0 0 chr18 38618929 38618950 -48058598 + (A)n Simple_repeat Simple_repeat 1 21 0 21 36 0 0 chr18 38619615 38619643 -48057905 + AT_rich Low_complexity Low_complexity 1 28 0 185 357 45 13 chr18 38620858 38621012 -48056536 - MIR SINE MIR -22 240 82 285 213 0 0 chr18 38621084 38621146 -48056402 - MIR3 SINE MIR -41 167 105 276 333 7 0 chr18 38621202 38621340 -48056208 + (CA)n Simple_repeat Simple_repeat 2 140 0 * 287 335 0 22 chr18 38621256 38621438 -48056110 + (CATA)n Simple_repeat Simple_repeat 1 178 0 * 462 322 0 0 chr18 38621352 38621529 -48056019 + (CA)n Simple_repeat Simple_repeat 1 177 0 467 33 16 0 chr18 38622169 38622230 -48055318 + (CA)n Simple_repeat Simple_repeat 2 63 0 264 229 0 16 chr18 38622961 38623022 -48054526 + (TG)n Simple_repeat Simple_repeat 1 60 0 222 37 0 0 chr18 38623594 38623621 -48053927 + (TG)n Simple_repeat Simple_repeat 1 27 0 217 248 86 29 chr18 38624285 38624390 -48053158 + MER5A DNA MER1_type 23 133 -56 188 197 0 33 chr18 38624737 38624798 -48052750 + (CATA)n Simple_repeat Simple_repeat 4 62 0 231 312 59 32 chr18 38624987 38625173 -48052375 + MIR SINE MIR 48 238 -24 273 219 49 12 chr18 38625642 38625724 -48051824 - L1ME4a LINE L1 -49 6072 5988 185 357 45 0 chr18 38626088 38626200 -48051348 + MIR3 SINE MIR 90 206 -2 186 308 88 11 chr18 38626533 38626624 -48050924 + MIR SINE MIR 123 220 -42 192 97 0 0 chr18 38626629 38626660 -48050888 + (TAA)n Simple_repeat Simple_repeat 3 33 0 490 259 86 27 chr18 38626673 38626893 -48050655 - MIR SINE MIR -10 252 20 1097 282 146 9 chr18 38627298 38628262 -48049286 - L2 LINE L2 0 3313 2200 632 252 0 61 chr18 38629508 38629722 -48047826 - MER3 DNA MER1_type -6 203 3 444 123 0 0 chr18 38629851 38629924 -48047624 + (TG)n Simple_repeat Simple_repeat 2 74 0 886 299 8 0 chr18 38629980 38630224 -48047324 + MIR SINE MIR 17 262 0 244 308 13 0 chr18 38631022 38631100 -48046448 - MIR SINE MIR -124 138 60 223 158 26 0 chr18 38634602 38634640 -48042908 + C-rich Low_complexity Low_complexity 4 42 0 222 196 71 18 chr18 38636578 38636634 -48040914 - MIR SINE MIR -85 177 119 210 118 0 0 chr18 38638494 38638528 -48039020 + (TC)n Simple_repeat Simple_repeat 2 35 0 477 219 0 0 chr18 38639049 38639154 -48038394 + MIR SINE MIR 87 191 -71 182 273 0 0 chr18 38639500 38639544 -48038004 + MER5B DNA MER1_type 88 131 -47 471 250 7 15 chr18 38640128 38640264 -48037284 - MIR SINE MIR -36 226 92 210 143 0 0 chr18 38640720 38640755 -48036793 + (CA)n Simple_repeat Simple_repeat 1 35 0 591 326 46 46 chr18 38640787 38641226 -48036322 - L1MC4a LINE L1 -1908 5900 5462 393 222 12 0 chr18 38641247 38641328 -48036220 + MIR SINE MIR 66 147 -61 237 329 24 0 chr18 38642381 38642466 -48035082 - MIR3 SINE MIR -50 158 72 294 229 24 24 chr18 38642503 38642586 -48034962 - MIR SINE MIR -149 113 31 535 191 26 0 chr18 38642933 38643048 -48034500 + L1 LINE L1 2897 3014 -3132 706 191 36 67 chr18 38643321 38643515 -48034033 - MER5A DNA MER1_type 0 189 2 1189 120 27 5 chr18 38644384 38644568 -48032980 - AluSg/x SINE Alu -2 308 121 2059 125 27 3 chr18 38644583 38644878 -48032670 + AluJo SINE Alu 1 302 -10 2012 140 35 0 chr18 38645180 38645465 -48032083 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr18 38647671 38647694 -48029854 + AT_rich Low_complexity Low_complexity 1 23 0 624 282 93 38 chr18 38648786 38649077 -48028471 - MER4B-int LTR ERV1 -99 4092 3786 590 269 29 12 chr18 38649750 38649921 -48027627 - MER4B-int LTR ERV1 -2790 3968 3795 428 51 17 0 chr18 38650436 38650495 -48027053 + (TG)n Simple_repeat Simple_repeat 1 60 0 21 0 0 0 chr18 38651243 38651264 -48026284 + AT_rich Low_complexity Low_complexity 1 21 0 377 196 30 151 chr18 38651522 38651822 -48025726 - MER46C DNA MER2_type 0 338 16 1274 270 113 6 chr18 38652240 38652751 -48024797 - L1MC4a LINE L1 -1983 5825 5260 2136 98 18 0 chr18 38652940 38653250 -48024298 - AluSg SINE Alu 0 315 1 1818 140 26 10 chr18 38653259 38653567 -48023981 - L1MA4 LINE L1 -5 6295 5983 10527 158 35 32 chr18 38653567 38655646 -48021902 - L1MA4 LINE L1 -949 5197 3112 3102 192 44 11 chr18 38656022 38656651 -48020897 + L1MA10 LINE L1 5525 6330 -4 466 253 54 42 chr18 38656663 38656829 -48020719 - L2 LINE L2 -1324 1990 1823 330 323 129 5 chr18 38656937 38657138 -48020410 - L2 LINE L2 -1756 1558 1333 6141 89 6 4 chr18 38657378 38658210 -48019338 - L1PA12 LINE L1 -1 6167 5334 180 298 0 0 chr18 38658237 38658284 -48019264 - L2 LINE L2 -2259 1055 1009 248 316 26 0 chr18 38658308 38658384 -48019164 + L2 LINE L2 3193 3270 -43 1308 189 75 82 chr18 38658419 38658822 -48018726 - LTR56 LTR ERV1 0 445 44 2879 7 0 0 chr18 38658822 38659129 -48018419 + AluYb8 SINE Alu 1 307 -11 1308 189 75 82 chr18 38659129 38659165 -48018383 - LTR56 LTR ERV1 -401 44 9 11735 166 64 79 chr18 38659266 38662103 -48015445 - LTR56-int LTR ERV1 -92 5699 3302 2487 57 0 3 chr18 38662103 38662402 -48015146 - AluY SINE Alu -13 298 1 11735 166 64 79 chr18 38662402 38662956 -48014592 - LTR56-int LTR ERV1 -2489 3302 2741 2125 136 32 65 chr18 38662947 38663254 -48014294 - LTR56-int LTR ERV1 -4510 1821 1533 * 234 0 0 0 chr18 38663254 38663280 -48014268 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2125 136 32 65 chr18 38663280 38663437 -48014111 - LTR56-int LTR ERV1 -4798 1533 1372 427 291 151 12 chr18 38663611 38663862 -48013686 - MER34B LTR ERV1 -275 290 5 225 108 0 0 chr18 38666086 38666123 -48011425 + (TTCA)n Simple_repeat Simple_repeat 3 39 0 2034 118 11 0 chr18 38666123 38666403 -48011145 - AluSp SINE Alu -30 283 1 233 91 0 45 chr18 38666426 38666470 -48011078 - LTR56 LTR ERV1 -395 50 9 669 351 138 24 chr18 38666548 38667180 -48010368 - L2 LINE L2 -2419 895 192 312 293 81 45 chr18 38667282 38667480 -48010068 + L1MC4a LINE L1 5729 5933 -1875 212 0 36 0 chr18 38667590 38667618 -48009930 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 786 270 154 15 chr18 38667624 38667755 -48009793 - L2 LINE L2 -9 3304 3193 204 40 0 0 chr18 38667755 38667780 -48009768 + (TG)n Simple_repeat Simple_repeat 2 26 0 786 270 154 15 chr18 38667780 38667985 -48009563 - L2 LINE L2 -120 3193 2921 * 954 238 186 9 chr18 38667975 38668303 -48009245 - L2 LINE L2 -838 2476 2091 559 270 0 33 chr18 38669515 38669667 -48007881 + MIR3 SINE MIR 33 179 -29 1770 152 58 81 chr18 38670714 38671003 -48006545 - MER45R DNA AcHobo 0 1581 1304 2110 112 13 7 chr18 38671003 38671307 -48006241 - AluSx SINE Alu 0 312 7 1770 152 58 81 chr18 38671307 38671450 -48006098 - MER45R DNA AcHobo -277 1304 1159 35306 71 8 103 chr18 38671450 38676204 -48001344 - L1PA6 LINE L1 -7 6147 1547 2236 180 17 152 chr18 38676204 38676849 -48000699 - LTR6A LTR ERV1 0 564 1 35306 71 8 103 chr18 38676849 38678253 -47999295 - L1PA6 LINE L1 -4607 1547 11 3816 185 16 16 chr18 38678266 38679012 -47998536 - MER45R DNA AcHobo -406 1175 430 186 71 0 0 chr18 38679105 38679133 -47998415 + (TTGG)n Simple_repeat Simple_repeat 4 31 0 2119 112 31 0 chr18 38679133 38679420 -47998128 - AluSx SINE Alu -16 296 1 469 249 221 6 chr18 38679574 38679755 -47997793 - MIR SINE MIR -6 256 37 651 240 62 44 chr18 38679798 38680023 -47997525 + MIR SINE MIR 33 261 -1 182 402 0 20 chr18 38684361 38684463 -47993085 + L2 LINE L2 1718 1817 -1497 2241 161 51 30 chr18 38684582 38685053 -47992495 - L1MB8 LINE L1 0 6178 5698 2325 72 10 3 chr18 38685069 38685362 -47992186 - AluSp SINE Alu -18 295 1 11190 108 29 27 chr18 38685383 38686832 -47990716 + Tigger1 DNA MER2_type 714 2168 -250 2285 98 3 3 chr18 38686832 38687137 -47990411 + AluSx SINE Alu 1 305 -7 11190 108 29 27 chr18 38687137 38687389 -47990159 + Tigger1 DNA MER2_type 2168 2418 0 191 207 138 35 chr18 38687750 38687808 -47989740 - MIR SINE MIR -151 111 48 2182 91 3 39 chr18 38687890 38688198 -47989350 + AluY SINE Alu 3 299 -12 557 241 92 0 chr18 38688325 38688466 -47989082 + MIR SINE MIR 109 262 0 231 333 43 68 chr18 38688487 38688721 -47988827 + L2 LINE L2 2712 2939 -375 351 411 0 6 chr18 38688756 38688919 -47988629 + L2 LINE L2 3111 3272 0 260 306 0 0 chr18 38689545 38689607 -47987941 + MIR SINE MIR 60 121 -141 289 214 114 0 chr18 38691395 38691465 -47986083 + MIR SINE MIR 44 121 -87 1403 188 62 55 chr18 38692425 38693192 -47984356 - L1MC4 LINE L1 -1 8041 7208 238 333 14 0 chr18 38693744 38693813 -47983735 - L2 LINE L2 -2 3270 3201 190 195 24 0 chr18 38694101 38694142 -47983406 - MIR SINE MIR -59 149 108 198 290 43 58 chr18 38694295 38694364 -47983184 + MIR SINE MIR 2 69 -193 447 309 109 11 chr18 38694767 38694942 -47982606 + MIR SINE MIR 35 226 -36 2376 78 3 3 chr18 38695526 38695834 -47981714 - AluSc SINE Alu 0 309 2 28 48 0 0 chr18 38696003 38696045 -47981503 + AT_rich Low_complexity Low_complexity 1 42 0 655 284 112 0 chr18 38696377 38696592 -47980956 + MIR SINE MIR 12 250 -12 547 255 28 0 chr18 38697466 38697607 -47979941 - MIR SINE MIR -111 151 7 258 215 25 76 chr18 38697987 38698066 -47979482 + MARNA DNA Mariner 112 186 -400 323 256 0 0 chr18 38698180 38698262 -47979286 - MARNA DNA Mariner -215 371 290 333 68 0 0 chr18 38701454 38701498 -47976050 + (T)n Simple_repeat Simple_repeat 1 44 0 25 51 0 0 chr18 38701726 38701765 -47975783 + AT_rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chr18 38702200 38702220 -47975328 + (CGG)n Simple_repeat Simple_repeat 1 20 0 349 262 107 10 chr18 38703897 38704000 -47973548 + L2 LINE L2 3157 3269 -3 237 224 47 47 chr18 38704688 38704773 -47972775 - L2 LINE L2 -37 3276 3192 219 254 55 0 chr18 38704842 38704897 -47972651 + MIR3 SINE MIR 112 169 -39 228 285 43 0 chr18 38706177 38706267 -47971281 + MIR SINE MIR 88 147 -61 1665 210 46 31 chr18 38706512 38706902 -47970646 + MSTD LTR MaLR 1 396 0 257 241 17 0 chr18 38707163 38707221 -47970327 + MIR SINE MIR 74 132 -76 1466 165 101 28 chr18 38707360 38707699 -47969849 + MLT2C1 LTR ERVL 1 480 -40 252 300 0 0 chr18 38707699 38707759 -47969789 + (TA)n Simple_repeat Simple_repeat 2 61 0 251 163 0 20 chr18 38707763 38707812 -47969736 + MLT2C1 LTR ERVL 350 397 0 349 289 169 6 chr18 38708848 38709014 -47968534 - MIR SINE MIR -7 255 63 283 306 38 23 chr18 38709357 38709496 -47968052 + MIR3 SINE MIR 42 179 -29 241 271 21 64 chr18 38710415 38710555 -47966993 + GA-rich Low_complexity Low_complexity 2 135 0 233 311 15 76 chr18 38711463 38711595 -47965953 - MIR SINE MIR -55 207 84 252 274 83 0 chr18 38712474 38712558 -47964990 - L3 LINE CR1 -350 1227 1137 183 306 54 54 chr18 38712959 38713070 -47964478 + MIR3 SINE MIR 94 204 -4 359 336 49 52 chr18 38714390 38714584 -47962964 + MIR SINE MIR 13 207 -55 362 307 0 0 chr18 38714900 38714988 -47962560 + L1MC4 LINE L1 6615 6702 -1340 184 302 0 0 chr18 38716432 38716475 -47961073 + L3 LINE CR1 1240 1282 -295 199 226 94 0 chr18 38716824 38716877 -47960671 - L3 LINE CR1 -171 1406 1349 1952 128 7 3 chr18 38718346 38718634 -47958914 - AluJo SINE Alu -23 289 1 325 331 115 14 chr18 38719500 38719648 -47957900 - L2 LINE L2 -3 3269 3107 533 198 0 6 chr18 38719804 38719961 -47957587 + (TGGA)n Simple_repeat Simple_repeat 4 159 0 384 216 0 0 chr18 38719984 38720086 -47957462 + (TGGA)n Simple_repeat Simple_repeat 1 102 0 209 360 0 0 chr18 38720608 38720733 -47956815 + (TG)n Simple_repeat Simple_repeat 2 126 0 564 250 0 0 chr18 38721570 38721746 -47955802 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 510 222 12 12 chr18 38721793 38721869 -47955679 + (TCCA)n Simple_repeat Simple_repeat 1 76 -95 1891 133 13 7 chr18 38721869 38722178 -47955370 - AluY SINE Alu 0 311 1 510 222 12 12 chr18 38722178 38722272 -47955276 + (TCCA)n Simple_repeat Simple_repeat 75 171 0 186 364 52 48 chr18 38722366 38722696 -47954852 - L2 LINE L2 -90 3182 2852 264 289 41 0 chr18 38722790 38722887 -47954661 - MIR SINE MIR -115 147 47 582 54 0 0 chr18 38723561 38723635 -47953913 + (TCCA)n Simple_repeat Simple_repeat 1 74 0 289 272 44 37 chr18 38723888 38724024 -47953524 + MER5A DNA MER1_type 35 171 -18 206 290 0 16 chr18 38724282 38724344 -47953204 + GA-rich Low_complexity Low_complexity 5 65 0 207 224 0 52 chr18 38724364 38724480 -47953068 + A-rich Low_complexity Low_complexity 5 114 0 376 263 124 18 chr18 38725937 38726113 -47951435 + MIR SINE MIR 20 210 -52 228 262 16 0 chr18 38726143 38726204 -47951344 - MIR SINE MIR -122 140 79 273 292 0 0 chr18 38726488 38726560 -47950988 + L2 LINE L2 3185 3256 -16 575 282 78 19 chr18 38727593 38727799 -47949749 + MIR SINE MIR 2 219 -43 349 324 115 14 chr18 38728566 38728705 -47948843 - MIR3 SINE MIR -50 158 6 215 306 0 0 chr18 38729371 38729433 -47948115 - L3b LINE CR1 -181 1402 1341 186 209 0 0 chr18 38730422 38730465 -47947083 + (CA)n Simple_repeat Simple_repeat 2 44 0 * 288 138 0 0 chr18 38730464 38730529 -47947019 + (GA)n Simple_repeat Simple_repeat 2 66 0 421 127 127 0 chr18 38731446 38731517 -47946031 - MADE1 DNA Mariner 0 80 1 372 381 0 0 chr18 38733570 38733725 -47943823 + MIR3 SINE MIR 7 161 -47 524 260 6 11 chr18 38736679 38736860 -47940688 + (TG)n Simple_repeat Simple_repeat 1 180 0 207 100 0 0 chr18 38738739 38738769 -47938779 + (T)n Simple_repeat Simple_repeat 1 30 0 6785 82 21 1 chr18 38738869 38739887 -47937661 - L1P LINE L1 -917 5229 4192 264 286 122 0 chr18 38739990 38740088 -47937460 - MIR SINE MIR -80 182 73 217 295 0 16 chr18 38740805 38740866 -47936682 + (TG)n Simple_repeat Simple_repeat 2 61 0 2031 119 0 38 chr18 38741180 38741499 -47936049 + AluSx SINE Alu 1 307 -5 246 32 0 0 chr18 38741788 38741819 -47935729 + (CAGCC)n Simple_repeat Simple_repeat 1 31 0 265 208 228 20 chr18 38742931 38743032 -47934516 - L2 LINE L2 -259 3054 2933 230 0 0 0 chr18 38743040 38743067 -47934481 + THE1C LTR MaLR 1 27 -348 6537 91 2 0 chr18 38743067 38743928 -47933620 + THE1B-int LTR MaLR 718 1580 0 2237 111 60 28 chr18 38743928 38744281 -47933267 + THE1B LTR MaLR 1 364 0 1933 117 22 0 chr18 38744611 38744916 -47932632 + AluSg SINE Alu 1 311 0 1575 144 42 28 chr18 38745133 38745418 -47932130 - AluJo SINE Alu -10 302 14 1412 122 0 0 chr18 38745439 38745636 -47931912 - AluSc SINE Alu -112 197 1 2135 89 3 17 chr18 38745636 38745938 -47931610 - AluY SINE Alu -13 298 1 209 328 12 23 chr18 38747508 38747679 -47929869 + GA-rich Low_complexity Low_complexity 1 169 0 * 326 338 7 7 chr18 38747563 38747702 -47929846 + G-rich Low_complexity Low_complexity 5 143 0 473 325 57 9 chr18 38748525 38748571 -47928977 - MIR SINE MIR -13 249 207 2210 107 0 0 chr18 38748571 38748869 -47928679 - AluSq SINE Alu -15 298 1 473 325 57 9 chr18 38748869 38749034 -47928514 - MIR SINE MIR -55 207 28 230 282 117 19 chr18 38749211 38749314 -47928234 - L2 LINE L2 -132 3140 3028 223 171 0 0 chr18 38750653 38750694 -47926854 + (TCTCTG)n Simple_repeat Simple_repeat 4 44 0 1912 136 10 26 chr18 38751492 38751802 -47925746 - AluSx SINE Alu 0 312 8 240 86 0 0 chr18 38753826 38753861 -47923687 + (T)n Simple_repeat Simple_repeat 1 35 0 22 35 0 0 chr18 38754280 38754309 -47923239 + AT_rich Low_complexity Low_complexity 1 29 0 319 302 32 56 chr18 38755464 38755590 -47921958 + L1MC4 LINE L1 6614 6736 -1306 27 0 0 0 chr18 38755987 38756014 -47921534 + AT_rich Low_complexity Low_complexity 1 27 0 197 0 0 67 chr18 38756265 38756295 -47921253 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 26 0 0 0 chr18 38757004 38757030 -47920518 + AT_rich Low_complexity Low_complexity 1 26 0 399 89 0 0 chr18 38757292 38757348 -47920200 + (CA)n Simple_repeat Simple_repeat 2 57 0 222 37 0 0 chr18 38758635 38758662 -47918886 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 186 296 125 11 chr18 38759120 38759208 -47918340 - L2 LINE L2 -29 3284 3187 595 232 106 40 chr18 38760747 38760945 -47916603 + MIR SINE MIR 41 251 -11 237 272 48 58 chr18 38761246 38761349 -47916199 - MIR3 SINE MIR -43 165 64 304 253 58 11 chr18 38761474 38761561 -47915987 + L2 LINE L2 3157 3247 -25 722 286 132 29 chr18 38761875 38762547 -47915001 + L2 LINE L2 2373 3294 -19 23 0 0 0 chr18 38763450 38763473 -47914075 + GC_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr18 38763685 38763714 -47913834 + GC_rich Low_complexity Low_complexity 1 29 0 235 247 20 48 chr18 38763873 38764019 -47913529 + (CCCA)n Simple_repeat Simple_repeat 2 143 0 183 146 0 0 chr18 38764630 38764671 -47912877 + (G)n Simple_repeat Simple_repeat 1 41 0 30 27 0 0 chr18 38764690 38764727 -47912821 + GC_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chr18 38764877 38764910 -47912638 + GC_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr18 38765086 38765107 -47912441 + GC_rich Low_complexity Low_complexity 1 21 0 326 289 116 0 chr18 38767073 38767194 -47910354 - MIR SINE MIR -36 226 92 2076 125 6 3 chr18 38767231 38767542 -47910006 - AluSx SINE Alu 0 312 1 688 155 143 24 chr18 38768624 38768792 -47908756 + MER53 DNA DNA 1 188 -1 208 321 18 9 chr18 38769246 38769358 -47908190 + G-rich Low_complexity Low_complexity 2 114 0 234 282 8 26 chr18 38769948 38770065 -47907483 + GA-rich Low_complexity Low_complexity 1 115 0 361 160 198 28 chr18 38770093 38770199 -47907349 + MIR SINE MIR 20 143 -119 855 249 44 18 chr18 38770664 38770893 -47906655 - MIR SINE MIR -21 241 7 283 296 42 28 chr18 38772278 38772420 -47905128 - MIR3 SINE MIR -2 206 63 272 325 87 8 chr18 38773843 38773969 -47903579 - MIR SINE MIR -112 150 15 261 245 11 11 chr18 38775660 38775754 -47901794 + (TG)n Simple_repeat Simple_repeat 2 95 0 250 298 0 43 chr18 38775761 38775855 -47901693 + (CATG)n Simple_repeat Simple_repeat 3 92 0 260 247 12 0 chr18 38775855 38775940 -47901608 + (TG)n Simple_repeat Simple_repeat 1 86 0 2173 96 3 13 chr18 38778482 38778785 -47898763 + AluSq SINE Alu 1 300 -13 277 230 17 35 chr18 38779166 38779271 -47898277 - MER91 DNA MER1_type -16 180 5 180 77 0 0 chr18 38779621 38779647 -47897901 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 254 317 98 16 chr18 38780145 38780268 -47897280 + MER5B DNA MER1_type 41 173 -5 2031 109 26 17 chr18 38782006 38782308 -47895240 - AluSx SINE Alu -7 305 1 1184 174 23 27 chr18 38782954 38783173 -47894375 - MER20 DNA MER1_type -1 218 1 198 0 0 0 chr18 38783328 38783350 -47894198 + (A)n Simple_repeat Simple_repeat 1 22 0 286 331 16 40 chr18 38785365 38785489 -47892059 + MIR SINE MIR 51 171 -91 378 259 0 34 chr18 38786082 38786229 -47891319 + G-rich Low_complexity Low_complexity 5 146 0 307 255 137 0 chr18 38786446 38786548 -47891000 + L2 LINE L2 2923 3038 -275 1289 221 148 57 chr18 38787064 38787570 -47889978 + MLT1G1 LTR MaLR 43 594 -1 180 238 24 0 chr18 38787590 38787632 -47889916 + L2 LINE L2 3230 3272 0 386 323 39 0 chr18 38790334 38790461 -47887087 - L2 LINE L2 -5 3267 3136 278 267 99 89 chr18 38790560 38790751 -47886797 - MIR3 SINE MIR -12 196 4 191 254 34 17 chr18 38791100 38791159 -47886389 - L2 LINE L2 -9 3304 3245 210 307 66 12 chr18 38792809 38792957 -47884591 + MIR SINE MIR 41 261 -1 414 305 38 29 chr18 38794076 38794286 -47883262 + L2 LINE L2 2636 2847 -467 234 324 36 36 chr18 38794284 38794395 -47883153 + L2 LINE L2 3203 3313 0 * 511 191 23 6 chr18 38794786 38794959 -47882589 + (CA)n Simple_repeat Simple_repeat 2 177 0 251 202 11 0 chr18 38794995 38795084 -47882464 + (CA)n Simple_repeat Simple_repeat 2 91 0 478 176 5 53 chr18 38795120 38795307 -47882241 + (CA)n Simple_repeat Simple_repeat 2 179 0 494 254 8 16 chr18 38795781 38795907 -47881641 - MIR SINE MIR -99 163 39 422 278 22 67 chr18 38798059 38798239 -47879309 - MER5B DNA MER1_type 0 178 7 228 188 0 62 chr18 38798528 38798576 -47878972 + C-rich Low_complexity Low_complexity 4 48 0 289 230 52 29 chr18 38798765 38798939 -47878609 + (TAGA)n Simple_repeat Simple_repeat 2 179 0 512 293 48 24 chr18 38799457 38799624 -47877924 - MIR SINE MIR -83 179 9 200 286 0 60 chr18 38800669 38800753 -47876795 - L3 LINE CR1 -1070 507 429 * 301 303 22 9 chr18 38800719 38800845 -47876703 - MIR SINE MIR -67 141 16 2208 88 7 16 chr18 38801926 38802234 -47875314 - AluSp SINE Alu -7 306 2 1638 200 80 37 chr18 38802923 38803273 -47874275 + MLT1A1 LTR MaLR 1 365 0 21 36 0 0 chr18 38803868 38803896 -47873652 + AT_rich Low_complexity Low_complexity 1 28 0 1650 235 38 16 chr18 38804192 38804643 -47872905 - MLT1C LTR MaLR -1 466 6 183 204 0 0 chr18 38804981 38805030 -47872518 + (CCAA)n Simple_repeat Simple_repeat 2 50 0 475 341 215 19 chr18 38805236 38805720 -47871828 - L3 LINE CR1 -814 763 185 303 287 9 35 chr18 38806643 38806758 -47870790 - MIR SINE MIR -85 177 66 1305 188 0 124 chr18 38807201 38807557 -47869991 - AluSx SINE Alu 0 312 1 504 203 22 72 chr18 38807576 38807714 -47869834 + MER94 DNA DNA 3 133 -1 937 223 71 40 chr18 38808614 38808910 -47868638 - L1ME2 LINE L1 -10 6154 5850 572 291 203 32 chr18 38809283 38809506 -47868042 + L2 LINE L2 2502 2686 -628 2108 105 16 33 chr18 38809506 38809812 -47867736 + AluSx SINE Alu 1 301 -11 572 291 203 32 chr18 38809812 38809993 -47867555 + L2 LINE L2 2686 2975 -339 199 339 15 0 chr18 38810025 38810090 -47867458 + L2 LINE L2 3207 3272 0 2110 100 0 10 chr18 38811305 38811604 -47865944 - AluSx SINE Alu -16 296 1 636 261 196 11 chr18 38811650 38812018 -47865530 - L2 LINE L2 -7 3306 2871 329 315 68 20 chr18 38816700 38816856 -47860692 + MIR3 SINE MIR 5 169 -58 313 319 26 18 chr18 38820414 38820527 -47857021 + MIR SINE MIR 74 187 -75 2274 71 0 10 chr18 38822664 38822960 -47854588 + AluSg SINE Alu 6 298 -12 2445 64 0 6 chr18 38822985 38823296 -47854252 + AluY SINE Alu 3 311 0 1959 128 6 29 chr18 38825334 38825646 -47851902 + AluSx SINE Alu 8 312 0 223 171 0 0 chr18 38826445 38826486 -47851062 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 221 263 40 13 chr18 38827829 38827905 -47849643 + L2 LINE L2 3028 3105 -167 418 321 56 23 chr18 38828111 38828279 -47849269 + MIR SINE MIR 28 206 -56 2144 114 0 16 chr18 38828279 38828585 -47848963 + AluSq SINE Alu 1 301 -12 418 321 56 23 chr18 38828585 38828631 -47848917 + MIR SINE MIR 206 249 -13 326 338 7 7 chr18 38829463 38829657 -47847891 + C-rich Low_complexity Low_complexity 1 194 0 2389 63 3 3 chr18 38831254 38831556 -47845992 + AluY SINE Alu 1 302 -9 185 62 0 31 chr18 38832960 38832992 -47844556 + (AGGGGG)n Simple_repeat Simple_repeat 5 35 0 253 291 58 10 chr18 38834071 38834174 -47843374 - MIR SINE MIR -96 166 59 190 320 90 0 chr18 38834980 38835058 -47842490 - MIR SINE MIR -70 192 108 2128 172 34 16 chr18 38835440 38835818 -47841730 + MLT1B LTR MaLR 4 388 -2 315 326 14 14 chr18 38836020 38836158 -47841390 - MIR SINE MIR -78 184 47 244 196 0 87 chr18 38837398 38837490 -47840058 + GA-rich Low_complexity Low_complexity 3 86 0 193 335 108 28 chr18 38838998 38839210 -47838338 + L2 LINE L2 2827 3055 -217 240 200 0 0 chr18 38839270 38839325 -47838223 + GA-rich Low_complexity Low_complexity 2 56 0 1322 196 3 10 chr18 38840131 38840422 -47837126 - MER45B DNA AcHobo -44 996 708 709 291 137 25 chr18 38840524 38840888 -47836660 - MER45C DNA AcHobo -212 741 337 716 196 20 7 chr18 38840980 38841133 -47836415 - MER45C DNA AcHobo -795 158 4 206 351 0 13 chr18 38844404 38844481 -47833067 + MIR SINE MIR 38 113 -95 345 252 0 0 chr18 38844603 38844706 -47832842 + CT-rich Low_complexity Low_complexity 2 104 0 800 56 0 0 chr18 38845018 38845125 -47832423 + (TCCA)n Simple_repeat Simple_repeat 1 107 0 203 244 128 35 chr18 38845126 38845212 -47832336 - L2 LINE L2 -18 3295 3202 255 58 19 39 chr18 38846288 38846340 -47831208 + (TCCC)n Simple_repeat Simple_repeat 3 53 0 293 211 7 21 chr18 38846743 38846885 -47830663 + (TG)n Simple_repeat Simple_repeat 1 140 0 1285 158 181 15 chr18 38847530 38847789 -47829759 - AluJo SINE Alu 0 302 1 255 357 0 42 chr18 38849332 38849475 -47828073 + (CCA)n Simple_repeat Simple_repeat 1 137 0 526 339 0 17 chr18 38849494 38849671 -47827877 + (CACCAT)n Simple_repeat Simple_repeat 6 179 0 331 417 6 6 chr18 38849618 38849798 -47827750 + (CAT)n Simple_repeat Simple_repeat 1 180 0 * 356 0 23 0 chr18 38850094 38850138 -47827410 + (TG)n Simple_repeat Simple_repeat 1 45 0 2032 147 0 0 chr18 38850809 38851108 -47826440 + AluSx SINE Alu 1 299 -13 203 171 0 0 chr18 38851855 38851890 -47825658 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 349 289 46 40 chr18 38852954 38853127 -47824421 + L3 LINE CR1 1398 1571 -6 309 51 0 0 chr18 38853597 38853636 -47823912 + (CA)n Simple_repeat Simple_repeat 1 39 0 264 277 131 44 chr18 38854014 38854151 -47823397 + MIR SINE MIR 46 194 -68 423 0 0 0 chr18 38854707 38854754 -47822794 + (TG)n Simple_repeat Simple_repeat 2 48 0 273 261 14 0 chr18 38854935 38855004 -47822544 + (TG)n Simple_repeat Simple_repeat 2 71 0 185 286 81 71 chr18 38855190 38855400 -47822148 + L2 LINE L2 2834 3045 -227 183 229 0 0 chr18 38857052 38857087 -47820461 - MER5A DNA MER1_type -150 39 5 207 0 0 0 chr18 38860078 38860101 -47817447 + (CAA)n Simple_repeat Simple_repeat 2 24 0 182 341 61 0 chr18 38860950 38861032 -47816516 - L2 LINE L2 0 3313 3227 251 265 37 85 chr18 38861152 38861341 -47816207 - L2 LINE L2 -252 3020 2841 452 229 90 110 chr18 38861661 38862095 -47815453 + MER110 LTR ERV1 70 479 -12 2061 123 0 19 chr18 38863004 38863314 -47814234 - AluSx SINE Alu 0 312 9 759 131 20 10 chr18 38863781 38864034 -47813514 + AluJo SINE Alu 12 312 0 196 245 0 38 chr18 38864049 38864102 -47813446 - MIR SINE MIR -204 58 8 313 319 26 18 chr18 38868385 38868498 -47809050 + MIR SINE MIR 74 187 -75 2322 75 0 3 chr18 38870621 38870915 -47806633 + AluSg SINE Alu 6 298 -12 2515 65 0 0 chr18 38870940 38871249 -47806299 + AluY SINE Alu 3 311 0 1994 129 6 26 chr18 38873281 38873592 -47803956 + AluSx SINE Alu 8 312 0 223 171 0 0 chr18 38874389 38874430 -47803118 + (CAGAGA)n Simple_repeat Simple_repeat 4 44 0 221 263 40 13 chr18 38875769 38875845 -47801703 + L2 LINE L2 3028 3105 -167 496 325 57 9 chr18 38876049 38876214 -47801334 + MIR SINE MIR 28 207 -55 2195 102 0 16 chr18 38876214 38876517 -47801031 + AluSq SINE Alu 1 298 -15 496 325 57 9 chr18 38876517 38876563 -47800985 + MIR SINE MIR 207 249 -13 326 338 7 7 chr18 38877386 38877580 -47799968 + C-rich Low_complexity Low_complexity 1 194 0 2424 63 3 0 chr18 38879165 38879466 -47798082 + AluY SINE Alu 1 302 -9 185 62 0 31 chr18 38880862 38880894 -47796654 + (AGGGGG)n Simple_repeat Simple_repeat 5 35 0 259 297 69 0 chr18 38881965 38882066 -47795482 - MIR SINE MIR -96 166 59 190 320 90 0 chr18 38882867 38882945 -47794603 - MIR SINE MIR -70 192 108 2152 164 37 16 chr18 38883327 38883704 -47793844 + MLT1B LTR MaLR 4 388 -2 355 309 22 7 chr18 38883904 38884040 -47793508 - MIR SINE MIR -78 184 47 244 196 0 87 chr18 38885278 38885370 -47792178 + GA-rich Low_complexity Low_complexity 3 86 0 212 259 56 56 chr18 38886965 38887073 -47790475 + L2 LINE L2 2948 3055 -217 240 200 0 0 chr18 38887133 38887188 -47790360 + GA-rich Low_complexity Low_complexity 2 56 0 1322 196 3 10 chr18 38887990 38888281 -47789267 - MER45B DNA AcHobo -44 996 708 683 282 115 28 chr18 38888383 38888635 -47788913 - MER45C DNA AcHobo -212 741 468 773 208 122 5 chr18 38888791 38888988 -47788560 - MER45C DNA AcHobo -730 223 4 319 337 166 6 chr18 38892232 38892407 -47785141 + MIR SINE MIR 46 248 -14 218 215 0 15 chr18 38892420 38892485 -47785063 + CT-rich Low_complexity Low_complexity 6 69 0 357 252 0 0 chr18 38892606 38892709 -47784839 + CT-rich Low_complexity Low_complexity 2 104 0 819 46 0 0 chr18 38893018 38893126 -47784422 + (TCCA)n Simple_repeat Simple_repeat 1 108 0 236 231 115 48 chr18 38893126 38893223 -47784325 - L2 LINE L2 -17 3255 3149 295 59 20 20 chr18 38894281 38894332 -47783216 + (TCCC)n Simple_repeat Simple_repeat 3 53 0 293 211 7 21 chr18 38894734 38894876 -47782672 + (TG)n Simple_repeat Simple_repeat 1 140 0 1255 158 181 19 chr18 38895518 38895778 -47781770 - AluJo SINE Alu 0 302 1 182 250 0 29 chr18 38897248 38897316 -47780232 + (CCA)n Simple_repeat Simple_repeat 3 68 0 528 341 0 17 chr18 38897367 38897546 -47780002 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 320 0 25 0 chr18 38897841 38897881 -47779667 + (TG)n Simple_repeat Simple_repeat 1 41 0 2024 148 0 0 chr18 38898549 38898847 -47778701 + AluSx SINE Alu 1 298 -14 203 171 0 0 chr18 38899594 38899629 -47777919 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 257 340 141 26 chr18 38899914 38900105 -47777443 - L3 LINE CR1 -108 1469 1257 343 297 45 76 chr18 38900549 38900839 -47776709 + L3 LINE CR1 1291 1571 -6 186 43 0 0 chr18 38901099 38901122 -47776426 + (TG)n Simple_repeat Simple_repeat 2 24 0 294 73 0 0 chr18 38901306 38901347 -47776201 + (CA)n Simple_repeat Simple_repeat 1 41 0 287 211 84 108 chr18 38901728 38901894 -47775654 + MIR SINE MIR 46 207 -55 423 0 0 0 chr18 38902422 38902469 -47775079 + (TG)n Simple_repeat Simple_repeat 2 48 0 273 261 14 0 chr18 38902650 38902719 -47774829 + (TG)n Simple_repeat Simple_repeat 2 71 0 185 286 81 71 chr18 38902905 38903115 -47774433 + L2 LINE L2 2834 3045 -227 207 0 0 0 chr18 38907774 38907797 -47769751 + (CAA)n Simple_repeat Simple_repeat 2 24 0 286 297 167 59 chr18 38908641 38909031 -47768517 - L2 LINE L2 0 3272 2841 438 229 90 109 chr18 38909350 38909783 -47767765 + MER110 LTR ERV1 70 479 -12 2096 123 0 16 chr18 38910691 38911000 -47766548 - AluSx SINE Alu 0 312 9 754 131 20 10 chr18 38911464 38911716 -47765832 + AluJo SINE Alu 12 311 -1 196 245 0 38 chr18 38911731 38911784 -47765764 - MIR SINE MIR -204 58 8 2374 71 0 0 chr18 38912032 38912327 -47765221 + AluY SINE Alu 1 295 -16 2212 78 37 0 chr18 38912853 38913147 -47764401 - AluY SINE Alu -6 305 1 344 325 155 16 chr18 38913246 38913440 -47764108 - MIR SINE MIR -16 246 26 203 311 0 16 chr18 38914108 38914169 -47763379 + (TG)n Simple_repeat Simple_repeat 2 61 0 2062 108 0 0 chr18 38914483 38914760 -47762788 + AluSx SINE Alu 1 277 -35 246 32 0 0 chr18 38915092 38915123 -47762425 + (CAGCC)n Simple_repeat Simple_repeat 1 31 0 274 208 228 20 chr18 38916234 38916335 -47761213 - L2 LINE L2 -259 3054 2933 6151 90 2 0 chr18 38916367 38917231 -47760317 + THE1B-int LTR MaLR 715 1580 0 2234 111 60 28 chr18 38917231 38917584 -47759964 + THE1B LTR MaLR 1 364 0 190 282 223 48 chr18 38917808 38917911 -47759637 + L2 LINE L2 3142 3262 -10 1963 117 22 0 chr18 38917913 38918218 -47759330 + AluSg SINE Alu 1 311 0 1602 153 41 27 chr18 38918426 38918720 -47758828 - AluJo SINE Alu -1 311 14 1430 123 0 0 chr18 38918741 38918936 -47758612 - AluSc SINE Alu -112 197 3 2137 112 0 23 chr18 38918938 38919243 -47758305 - AluSx SINE Alu -13 299 2 455 244 187 34 chr18 38919548 38919757 -47757791 - MIR SINE MIR -2 260 20 259 390 42 35 chr18 38919861 38920120 -47757428 + MIR SINE MIR 2 262 0 2311 102 0 0 chr18 38924573 38924877 -47752671 - AluSx SINE Alu -8 304 1 201 337 82 20 chr18 38924977 38925075 -47752473 + L3 LINE CR1 814 917 -660 445 257 61 34 chr18 38925075 38925223 -47752325 + L3 LINE CR1 1327 1478 -99 241 306 194 8 chr18 38925771 38925895 -47751653 - MIR SINE MIR -97 165 19 234 62 0 0 chr18 38926271 38926303 -47751245 + (TGG)n Simple_repeat Simple_repeat 2 33 0 204 125 0 0 chr18 38926770 38926802 -47750746 + (T)n Simple_repeat Simple_repeat 1 32 0 947 364 112 12 chr18 38929527 38930390 -47747158 - L3 LINE CR1 -4 1573 624 5216 51 0 2 chr18 38931106 38931736 -47745812 + L1PA5 LINE L1 5526 6154 0 24 53 0 0 chr18 38931885 38931923 -47745625 + AT_rich Low_complexity Low_complexity 1 38 0 255 245 66 86 chr18 38932103 38932254 -47745294 - MIR SINE MIR -55 207 60 362 272 64 16 chr18 38932635 38932760 -47744788 - MIR SINE MIR -62 200 70 448 315 155 0 chr18 38934578 38934797 -47742751 - MIR SINE MIR -6 256 4 374 322 18 18 chr18 38936078 38936249 -47741299 + GA-rich Low_complexity Low_complexity 6 176 0 276 246 29 129 chr18 38936415 38936586 -47740962 + MER5B DNA MER1_type 1 154 -24 188 231 77 39 chr18 38938219 38938297 -47739251 + L2 LINE L2 3190 3270 -2 225 0 0 0 chr18 38938599 38938624 -47738924 + (A)n Simple_repeat Simple_repeat 1 25 0 802 167 12 0 chr18 38939619 38940048 -47737500 + (TCCA)n Simple_repeat Simple_repeat 1 434 0 753 80 56 0 chr18 38940086 38940248 -47737300 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 190 302 32 0 chr18 38940254 38940317 -47737231 - L2 LINE L2 0 3313 3249 258 266 0 16 chr18 38940395 38940459 -47737089 - L2 LINE L2 -216 3056 2994 675 248 111 21 chr18 38941182 38941416 -47736132 - MIR SINE MIR 0 262 8 342 0 0 0 chr18 38942114 38942152 -47735396 + (TATG)n Simple_repeat Simple_repeat 2 39 0 749 144 48 32 chr18 38942152 38942277 -47735271 - FLAM_C SINE Alu -16 127 1 442 255 64 82 chr18 38942738 38942948 -47734600 - MIR SINE MIR -43 219 16 2254 100 0 25 chr18 38944155 38944475 -47733073 + AluSx SINE Alu 1 312 0 200 286 52 0 chr18 38946987 38947064 -47730484 + L2 LINE L2 432 512 -2802 344 200 0 42 chr18 38947476 38947596 -47729952 + CT-rich Low_complexity Low_complexity 1 115 0 500 246 154 29 chr18 38951866 38952106 -47725442 + L2 LINE L2 3005 3274 -39 24 0 0 0 chr18 38952946 38952970 -47724578 + AT_rich Low_complexity Low_complexity 1 24 0 198 336 76 30 chr18 38955363 38955494 -47722054 + L2 LINE L2 3126 3262 -10 1057 217 0 0 chr18 38957500 38957707 -47719841 + MIR SINE MIR 21 227 -35 302 325 58 7 chr18 38958838 38958992 -47718556 + MARNA DNA Mariner 322 483 -103 459 249 291 5 chr18 38959190 38959379 -47718169 + MIR SINE MIR 20 262 0 203 328 0 0 chr18 38960619 38960680 -47716868 + MIR SINE MIR 89 149 -113 191 263 84 32 chr18 38960944 38961039 -47716509 + MIR SINE MIR 47 146 -62 364 377 60 0 chr18 38961677 38961860 -47715688 - MIR SINE MIR -68 194 1 192 125 0 0 chr18 38962249 38962281 -47715267 + (ATGGTG)n Simple_repeat Simple_repeat 4 35 0 358 344 31 0 chr18 38964702 38964830 -47712718 - MIR3 SINE MIR 0 208 77 215 333 0 0 chr18 38964911 38964983 -47712565 + CT-rich Low_complexity Low_complexity 2 73 0 313 285 76 41 chr18 38965510 38965682 -47711866 - L3 LINE CR1 -15 1562 1385 308 358 173 25 chr18 38965664 38966649 -47710899 + L2 LINE L2 1733 2862 -452 * 318 313 104 38 chr18 38966742 38967030 -47710518 + L2 LINE L2 2946 3252 -61 352 286 20 10 chr18 38968405 38968503 -47709045 + L2 LINE L2 3174 3272 0 281 243 9 0 chr18 38975418 38975525 -47702023 + (TG)n Simple_repeat Simple_repeat 1 108 0 193 271 102 0 chr18 38975815 38975874 -47701674 + MIR SINE MIR 86 150 -112 1313 117 0 0 chr18 38977640 38977819 -47699729 - AluJb SINE Alu -2 310 132 288 0 0 0 chr18 38978454 38978486 -47699062 + (TG)n Simple_repeat Simple_repeat 2 33 0 203 194 0 0 chr18 38982007 38982043 -47695505 + T-rich Low_complexity Low_complexity 1 36 0 221 129 57 0 chr18 38982700 38982770 -47694778 + (TA)n Simple_repeat Simple_repeat 1 74 0 202 236 18 18 chr18 38985079 38985134 -47692414 - MIR SINE MIR -69 139 85 218 327 175 14 chr18 38985490 38985707 -47691841 + L2 LINE L2 2594 2845 -469 235 289 237 0 chr18 38987495 38987647 -47689901 + MIR SINE MIR 66 253 -9 2649 193 17 4 chr18 38987724 38988247 -47689301 + L1MB5 LINE L1 5614 6143 -31 195 100 0 0 chr18 38990091 38990121 -47687427 + (GAAA)n Simple_repeat Simple_repeat 2 31 0 254 234 45 19 chr18 38990473 38990627 -47686921 + CT-rich Low_complexity Low_complexity 3 160 0 447 237 6 18 chr18 38990675 38990844 -47686704 + CT-rich Low_complexity Low_complexity 3 169 0 284 186 0 14 chr18 38990902 38990972 -47686576 + CT-rich Low_complexity Low_complexity 2 70 0 227 351 18 6 chr18 38991743 38991908 -47685640 + L2 LINE L2 2887 3053 -219 360 0 0 0 chr18 38992035 38992075 -47685473 + (TG)n Simple_repeat Simple_repeat 2 41 0 271 346 20 72 chr18 38992498 38992651 -47684897 - L2 LINE L2 -11 3261 3117 28 0 0 0 chr18 38992971 38992999 -47684549 + AT_rich Low_complexity Low_complexity 1 28 0 199 320 93 0 chr18 38994005 38994102 -47683446 + L2 LINE L2 3208 3313 0 232 326 109 0 chr18 38994337 38994475 -47683073 + L2 LINE L2 2929 3081 -191 259 268 31 41 chr18 38994724 38994821 -47682727 - MIR SINE MIR -136 126 31 449 177 13 0 chr18 38995608 38995687 -47681861 - MER81 DNA DNA -32 82 3 203 286 54 0 chr18 38998465 38998521 -47679027 - MIR SINE MIR -59 149 91 426 250 33 8 chr18 38999223 38999343 -47678205 + MIR3 SINE MIR 68 190 -18 21 57 0 0 chr18 38999578 38999613 -47677935 + AT_rich Low_complexity Low_complexity 1 35 0 258 284 95 40 chr18 39000127 39000275 -47677273 + MIR SINE MIR 105 260 -2 266 288 12 0 chr18 39002165 39002245 -47675303 + MIR SINE MIR 179 259 -3 315 281 22 0 chr18 39003360 39003449 -47674099 + MIR SINE MIR 61 151 -57 206 195 0 0 chr18 39004096 39004137 -47673411 - L2 LINE L2 -19 3253 3213 282 125 0 0 chr18 39004833 39004881 -47672667 + (GGA)n Simple_repeat Simple_repeat 1 48 0 742 290 105 31 chr18 39005010 39005518 -47672030 + L2 LINE L2 2774 3313 0 260 256 64 26 chr18 39005995 39006073 -47671475 + MIR SINE MIR 118 198 -64 253 321 124 19 chr18 39006985 39007250 -47670298 + L1ME4a LINE L1 5607 5899 -1909 356 327 54 54 chr18 39007258 39007481 -47670067 + L1ME4a LINE L1 5899 6121 0 380 226 85 0 chr18 39009444 39009550 -47667998 + MER5B DNA MER1_type 2 116 -62 183 129 0 0 chr18 39012940 39012971 -47664577 + (TG)n Simple_repeat Simple_repeat 2 32 0 2275 117 0 0 chr18 39014479 39014786 -47662762 + AluSg SINE Alu 2 308 -2 671 330 56 4 chr18 39014882 39015115 -47662433 - MIR SINE MIR -1 261 17 815 197 6 0 chr18 39015398 39015576 -47661972 + C-rich Low_complexity Low_complexity 2 180 0 222 214 0 54 chr18 39015596 39015652 -47661896 + CT-rich Low_complexity Low_complexity 2 54 0 180 211 58 77 chr18 39015959 39016011 -47661537 + MIR SINE MIR 122 172 -90 223 287 21 21 chr18 39016684 39016778 -47660770 + L2 LINE L2 3139 3232 -40 245 323 52 0 chr18 39016827 39016923 -47660625 + MIR SINE MIR 75 175 -87 * 268 296 28 0 chr18 39016919 39016990 -47660558 + L2 LINE L2 3241 3313 0 2393 84 0 3 chr18 39017623 39017934 -47659614 - AluY SINE Alu -1 310 1 256 123 0 35 chr18 39019476 39019533 -47658015 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 229 325 60 46 chr18 39020112 39020263 -47657285 - MIR SINE MIR -82 180 28 289 241 145 0 chr18 39020741 39020824 -47656724 + MIR SINE MIR 51 145 -63 185 322 0 78 chr18 39021188 39021278 -47656270 + MIR3 SINE MIR 98 180 -28 1872 87 140 0 chr18 39021309 39021574 -47655974 + AluSx SINE Alu 1 302 0 335 301 110 25 chr18 39021593 39021756 -47655792 + MIR SINE MIR 60 236 -26 539 325 86 5 chr18 39022730 39022939 -47654609 + MIR SINE MIR 2 227 -35 2472 73 0 6 chr18 39023241 39023554 -47653994 - AluY SINE Alu 0 311 1 296 302 40 63 chr18 39023671 39023797 -47653751 - MIR SINE MIR -62 200 78 268 368 55 12 chr18 39025083 39025246 -47652302 - MIR3 SINE MIR -16 192 23 246 361 39 39 chr18 39025282 39025412 -47652136 + L2 LINE L2 3113 3242 -30 228 304 0 0 chr18 39025526 39025595 -47651953 + L3 LINE CR1 1396 1464 -113 432 350 52 0 chr18 39028221 39028415 -47649133 - MIR SINE MIR -12 250 47 211 287 74 57 chr18 39029672 39029714 -47647834 - MIR3 SINE MIR -18 190 150 1698 163 70 57 chr18 39029714 39030083 -47647465 + MLT1A2 LTR MaLR 1 374 0 211 287 74 57 chr18 39030083 39030162 -47647386 - MIR3 SINE MIR -58 150 67 535 302 0 0 chr18 39030944 39031073 -47646475 - MIR3 SINE MIR -18 190 62 189 245 0 0 chr18 39031278 39031327 -47646221 + (TG)n Simple_repeat Simple_repeat 2 50 0 186 224 0 0 chr18 39032650 39032699 -47644849 + (CCTA)n Simple_repeat Simple_repeat 1 49 0 324 307 35 18 chr18 39032724 39032838 -47644710 + MIR SINE MIR 87 202 -60 351 0 0 0 chr18 39033160 39033199 -47644349 + (TG)n Simple_repeat Simple_repeat 2 40 0 189 0 0 0 chr18 39035594 39035615 -47641933 + (TCTCCC)n Simple_repeat Simple_repeat 3 23 0 581 215 195 0 chr18 39035883 39036032 -47641516 + MIR SINE MIR 47 224 -38 276 30 0 0 chr18 39036502 39036535 -47641013 + (CA)n Simple_repeat Simple_repeat 1 33 0 299 256 39 0 chr18 39037831 39037909 -47639639 - MIR SINE MIR -74 188 108 583 313 104 6 chr18 39038301 39038529 -47639019 + MIR SINE MIR 15 262 0 219 141 0 94 chr18 39038569 39038633 -47638915 + (TCTCCC)n Simple_repeat Simple_repeat 5 62 0 189 107 0 0 chr18 39038846 39038874 -47638674 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 193 338 150 0 chr18 39039190 39039323 -47638225 - MIR SINE MIR -50 212 60 235 296 99 0 chr18 39040865 39041003 -47636545 - MIR3 SINE MIR -19 189 37 973 259 136 6 chr18 39041380 39041697 -47635851 - L2 LINE L2 -32 3281 2924 201 324 0 0 chr18 39042015 39042083 -47635465 + (TG)n Simple_repeat Simple_repeat 2 69 0 193 114 0 45 chr18 39042087 39042131 -47635417 + (TATG)n Simple_repeat Simple_repeat 4 45 0 319 277 15 7 chr18 39042189 39042326 -47635222 + CT-rich Low_complexity Low_complexity 1 138 0 386 230 6 17 chr18 39043171 39043349 -47634199 + (TG)n Simple_repeat Simple_repeat 1 176 0 195 100 0 0 chr18 39043413 39043443 -47634105 + (TG)n Simple_repeat Simple_repeat 1 30 0 253 348 72 14 chr18 39044098 39044236 -47633312 - MIR SINE MIR 0 262 117 25 0 0 0 chr18 39046634 39046659 -47630889 + AT_rich Low_complexity Low_complexity 1 25 0 250 257 177 0 chr18 39048523 39048631 -47628917 - MIR SINE MIR -61 147 29 2774 81 16 8 chr18 39053124 39053495 -47624053 - THE1C LTR MaLR -1 374 1 219 308 37 28 chr18 39053684 39053791 -47623757 - MIR SINE MIR -63 145 38 233 300 92 0 chr18 39053833 39053963 -47623585 - MIR SINE MIR -1 207 60 1120 63 23 35 chr18 39054633 39054807 -47622741 - MER30 DNA MER1_type -58 172 1 206 279 221 0 chr18 39054862 39054966 -47622582 - L2 LINE L2 -20 3293 3167 613 200 15 15 chr18 39055017 39055152 -47622396 - MER45A DNA AcHobo -31 147 13 211 330 25 86 chr18 39055265 39055462 -47622086 - MIR SINE MIR -32 230 46 201 250 0 67 chr18 39056891 39056951 -47620597 + MIR SINE MIR 94 149 -59 21 0 0 0 chr18 39057056 39057077 -47620471 + AT_rich Low_complexity Low_complexity 1 21 0 552 310 50 56 chr18 39058483 39058802 -47618746 - L2 LINE L2 -9 3263 2947 244 312 11 11 chr18 39059852 39059945 -47617603 + (TG)n Simple_repeat Simple_repeat 2 94 0 371 375 104 7 chr18 39060398 39060481 -47617067 - L3 LINE CR1 -338 1239 1166 2458 111 16 29 chr18 39060481 39060861 -47616687 - THE1C LTR MaLR 0 375 1 371 375 104 7 chr18 39060861 39061084 -47616464 - L3 LINE CR1 -411 1166 903 468 0 0 0 chr18 39062719 39062771 -47614777 + (TG)n Simple_repeat Simple_repeat 1 52 0 270 0 0 0 chr18 39062773 39062803 -47614745 + (GA)n Simple_repeat Simple_repeat 2 31 0 293 320 19 51 chr18 39063555 39063711 -47613837 + L2 LINE L2 3159 3309 -4 528 274 43 34 chr18 39064375 39064583 -47612965 - MIR SINE MIR -10 252 43 239 302 57 9 chr18 39064844 39064950 -47612598 - L3 LINE CR1 -62 1515 1405 362 266 18 36 chr18 39065660 39065870 -47611678 + MLT1J LTR MaLR 4 273 -331 291 274 42 11 chr18 39066097 39066192 -47611356 - MIR SINE MIR -80 128 31 269 296 94 22 chr18 39066393 39066585 -47610963 + MIR SINE MIR 30 236 -26 1678 257 55 13 chr18 39066665 39067136 -47610412 + LTR16C LTR ERVL 1 491 0 331 298 133 6 chr18 39067162 39067320 -47610228 - MER5A DNA MER1_type 0 189 12 278 277 82 50 chr18 39070048 39070207 -47607341 - MIR3 SINE MIR -3 205 42 186 171 49 0 chr18 39070849 39070890 -47606658 + MIR SINE MIR 31 73 -135 187 163 61 41 chr18 39071119 39071168 -47606380 - L2 LINE L2 -513 2801 2752 886 130 284 0 chr18 39071242 39071411 -47606137 - MER20 DNA MER1_type -2 217 1 2149 171 98 7 chr18 39071614 39072042 -47605506 + MLT1C LTR MaLR 1 467 0 226 288 36 9 chr18 39072604 39072715 -47604833 + GA-rich Low_complexity Low_complexity 1 114 0 198 209 0 0 chr18 39072725 39072768 -47604780 + A-rich Low_complexity Low_complexity 3 45 0 686 256 135 0 chr18 39073715 39073922 -47603626 + MIR SINE MIR 28 262 0 307 315 51 34 chr18 39127302 39127480 -47550068 + MIR SINE MIR 32 212 -50 754 248 71 18 chr18 39128074 39128300 -47549248 + MIR SINE MIR 7 244 -18 728 247 35 96 chr18 39128527 39128924 -47548624 - MLT1H LTR MaLR 0 549 177 23 0 0 0 chr18 39129097 39129120 -47548428 + AT_rich Low_complexity Low_complexity 1 23 0 496 188 2 12 chr18 39129777 39129887 -47547661 + L1MA9 LINE L1 5828 5936 -242 * 637 101 81 0 chr18 39129878 39129977 -47547571 + L1MA9 LINE L1 6166 6272 -40 360 189 24 30 chr18 39130039 39130203 -47547345 + (TA)n Simple_repeat Simple_repeat 2 164 0 242 137 20 0 chr18 39130208 39130259 -47547289 + L1MA9 LINE L1 6261 6312 0 182 355 24 16 chr18 39130517 39130641 -47546907 - MIR SINE MIR -50 212 88 250 325 96 12 chr18 39131124 39131290 -47546258 + L3 LINE CR1 1246 1425 -152 216 308 0 0 chr18 39131403 39131468 -47546080 - L3 LINE CR1 -240 1337 1273 265 250 25 0 chr18 39132508 39132588 -47544960 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 3199 269 110 41 chr18 39133052 39133599 -47543949 - HAL1 LINE L1 0 2507 1999 192 40 0 0 chr18 39133599 39133624 -47543924 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 3199 269 110 41 chr18 39133624 39134895 -47542653 - HAL1 LINE L1 -508 1999 563 1952 120 56 3 chr18 39137075 39137359 -47540189 - AluSq SINE Alu -14 299 1 1614 227 59 42 chr18 39137362 39137837 -47539711 - MLT1D LTR MaLR -2 503 21 327 113 0 0 chr18 39138333 39138386 -47539162 + (TG)n Simple_repeat Simple_repeat 2 54 0 225 211 0 0 chr18 39138775 39138827 -47538721 + (CA)n Simple_repeat Simple_repeat 2 53 0 430 216 168 24 chr18 39139676 39139797 -47537751 + MLT1E LTR MaLR 24 162 -431 325 88 158 0 chr18 39139797 39139854 -47537694 + MLT2A2 LTR ERVL 3 68 -385 1618 68 10 0 chr18 39139854 39140061 -47537487 - MLT2A2 LTR ERVL -244 209 1 1431 203 89 51 chr18 39140115 39140485 -47537063 + MLT1E LTR MaLR 210 593 0 322 274 166 17 chr18 39141278 39141453 -47536095 + HAL1 LINE L1 280 480 -2027 435 324 38 5 chr18 39141665 39141875 -47535673 + L2 LINE L2 2869 3085 -228 2268 161 74 0 chr18 39141975 39142380 -47535168 - L1MB3 LINE L1 0 6183 5749 343 246 11 11 chr18 39145129 39145223 -47532325 + MIR SINE MIR 24 106 -102 252 223 160 11 chr18 39145560 39145654 -47531894 - MIR SINE MIR -30 232 125 317 318 47 10 chr18 39149957 39150141 -47527407 - L2 LINE L2 -252 3020 2837 533 260 82 42 chr18 39150157 39150565 -47526983 - MLT1H LTR MaLR 0 549 83 227 111 0 44 chr18 39150670 39150715 -47526833 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 264 321 27 27 chr18 39150914 39151026 -47526522 - L2 LINE L2 -161 3111 3000 201 147 0 0 chr18 39154974 39155008 -47522540 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 264 100 0 0 chr18 39155044 39155084 -47522464 + (TGAA)n Simple_repeat Simple_repeat 3 42 0 180 125 0 0 chr18 39155911 39155943 -47521605 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 700 294 94 42 chr18 39156403 39157279 -47520269 + L1MCa LINE L1 924 2031 -4576 15261 46 21 1 chr18 39157566 39160457 -47517091 - L1PA5 LINE L1 -1 6153 3156 2478 294 62 46 chr18 39160429 39161529 -47516019 + L1MCa LINE L1 2047 3128 -3298 * 1973 68 19 15 chr18 39161529 39161795 -47515753 + L1PA13 LINE L1 5897 6163 0 2478 294 62 46 chr18 39161795 39163369 -47514179 + L1MCa LINE L1 3128 4767 -1659 313 228 87 47 chr18 39163451 39163600 -47513948 + L1MCa LINE L1 5110 5264 -1162 29 90 0 0 chr18 39163616 39163694 -47513854 + AT_rich Low_complexity Low_complexity 1 78 0 1698 286 106 26 chr18 39163699 39164771 -47512777 + L1MCa LINE L1 5289 6443 -7 351 326 110 27 chr18 39165340 39165641 -47511907 - LTR16B LTR ERVL -75 389 64 761 113 35 21 chr18 39165641 39165782 -47511766 + MER50 LTR ERV1 499 641 -93 271 0 0 49 chr18 39165784 39165825 -47511723 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 246 23 45 23 chr18 39165894 39165938 -47511610 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 881 35 9 0 chr18 39165938 39166051 -47511497 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 878 85 8 0 chr18 39166152 39166281 -47511267 + (TTCC)n Simple_repeat Simple_repeat 3 132 0 1811 166 16 0 chr18 39166281 39166588 -47510960 - AluSx SINE Alu 0 312 1 228 254 84 0 chr18 39168310 39168381 -47509167 + MIR SINE MIR 61 137 -125 359 313 17 9 chr18 39170220 39170335 -47507213 - MIR SINE MIR -99 163 48 314 269 10 88 chr18 39171347 39171568 -47505980 + GA-rich Low_complexity Low_complexity 1 203 0 218 286 16 0 chr18 39171958 39172021 -47505527 + MIR SINE MIR 81 144 -118 374 279 192 12 chr18 39173365 39173537 -47504011 - MIR SINE MIR -12 250 48 216 0 0 0 chr18 39175605 39175629 -47501919 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 25 51 0 0 chr18 39175762 39175801 -47501747 + AT_rich Low_complexity Low_complexity 1 39 0 1258 220 53 3 chr18 39177301 39177622 -47499926 - MER33 DNA MER1_type -8 316 1 347 287 7 52 chr18 39177988 39178124 -47499424 + MIR SINE MIR 80 209 -53 200 300 12 12 chr18 39180338 39180418 -47497130 + (AATAG)n Simple_repeat Simple_repeat 4 83 0 253 292 92 31 chr18 39181398 39181528 -47496020 - L2 LINE L2 -17 3296 3159 353 278 202 20 chr18 39181781 39182029 -47495519 + MLT1K LTR MaLR 137 429 -159 4070 166 30 33 chr18 39182497 39183284 -47494264 + LTR1 LTR ERV1 1 785 0 290 311 19 0 chr18 39183532 39183638 -47493910 + MIR3 SINE MIR 86 193 -15 242 300 34 51 chr18 39183852 39183987 -47493561 + MIR SINE MIR 17 145 -63 1425 252 121 22 chr18 39187458 39187997 -47489551 - MLT1G1 LTR MaLR -1 594 3 271 329 39 29 chr18 39188465 39188672 -47488876 - L1MC/D LINE L1 -2000 5808 5600 389 329 48 38 chr18 39188872 39189185 -47488363 - L1MC/D LINE L1 -751 5395 5080 222 91 0 0 chr18 39189245 39189278 -47488270 + (CA)n Simple_repeat Simple_repeat 1 33 0 310 287 87 0 chr18 39189613 39189728 -47487820 - MIR SINE MIR -21 241 117 435 251 12 96 chr18 39191115 39191309 -47486239 + MIR SINE MIR 19 192 -58 546 275 23 0 chr18 39191722 39191853 -47485695 + L2 LINE L2 3136 3269 -3 220 333 38 0 chr18 39191919 39192024 -47485524 - MIR SINE MIR -66 196 88 282 308 60 30 chr18 39192830 39192963 -47484585 + MIR SINE MIR 12 148 -114 599 226 30 98 chr18 39192975 39193318 -47484230 - MLT1H LTR MaLR -2 547 105 2080 260 164 30 chr18 39193669 39193793 -47483755 - L2 LINE L2 -22 3291 3185 2170 122 3 0 chr18 39193793 39194087 -47483461 + AluY SINE Alu 1 295 -16 2080 260 164 30 chr18 39194087 39195277 -47482271 - L2 LINE L2 -128 3185 1805 285 301 11 0 chr18 39195843 39195936 -47481612 + L3 LINE CR1 1419 1512 -65 2357 117 0 0 chr18 39198423 39198731 -47478817 - AluSq SINE Alu -5 308 1 388 274 179 32 chr18 39200270 39200711 -47476837 + LTR33 LTR ERVL 9 514 -7 25 0 0 0 chr18 39200796 39200821 -47476727 + AT_rich Low_complexity Low_complexity 1 25 0 6770 124 42 61 chr18 39201316 39202569 -47474979 + Tigger3b DNA MER2_type 1 1230 -1 498 249 90 77 chr18 39204035 39204336 -47473212 - MLT1G LTR MaLR -81 461 197 319 294 0 0 chr18 39204348 39204433 -47473115 - L1MC4 LINE L1 -1339 6703 6619 7582 31 0 5 chr18 39204433 39205383 -47472165 - L1PA6 LINE L1 -4 6150 5201 289 275 33 22 chr18 39205390 39205481 -47472067 - MLT1G1 LTR MaLR -347 248 157 2230 128 0 10 chr18 39205490 39205795 -47471753 - AluSx SINE Alu -10 302 1 278 224 0 95 chr18 39205796 39205942 -47471606 - MLT1H LTR MaLR -379 170 5 2210 160 5 13 chr18 39206098 39206472 -47471076 - THE1C LTR MaLR -1 374 4 393 320 87 0 chr18 39208647 39208866 -47468682 - L2 LINE L2 -557 2757 2520 324 295 62 0 chr18 39209221 39209333 -47468215 - MIR3 SINE MIR -49 159 41 354 45 0 0 chr18 39210828 39210872 -47466676 + (TG)n Simple_repeat Simple_repeat 1 44 0 215 160 40 0 chr18 39211605 39211655 -47465893 + GA-rich Low_complexity Low_complexity 5 56 0 328 331 34 39 chr18 39211672 39211850 -47465698 + MIR SINE MIR 24 200 -62 725 291 5 10 chr18 39212826 39213025 -47464523 - MIR SINE MIR -31 231 34 734 218 58 0 chr18 39213035 39213191 -47464357 - FRAM SINE Alu -8 168 4 277 240 70 20 chr18 39214879 39214979 -47462569 - MLT1I LTR MaLR -9 400 296 261 300 100 15 chr18 39215123 39215253 -47462295 - MLT1I LTR MaLR -250 159 19 216 97 0 0 chr18 39215466 39215497 -47462051 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 933 239 145 42 chr18 39215497 39216163 -47461385 - L2 LINE L2 -13 3300 2561 963 269 77 54 chr18 39217317 39217797 -47459751 + LTR33 LTR ERVL 19 509 -12 316 289 48 30 chr18 39218114 39218280 -47459268 - MIR SINE MIR 0 262 94 241 373 25 8 chr18 39219024 39219142 -47458406 + MIR SINE MIR 2 121 -141 359 337 105 27 chr18 39219187 39219662 -47457886 + L2 LINE L2 2417 2928 -386 22 0 0 0 chr18 39220616 39220638 -47456910 + AT_rich Low_complexity Low_complexity 1 22 0 255 61 0 0 chr18 39220824 39220857 -47456691 + (GA)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr18 39220857 39220881 -47456667 + AT_rich Low_complexity Low_complexity 1 24 0 423 0 0 0 chr18 39220907 39220954 -47456594 + (TG)n Simple_repeat Simple_repeat 2 48 0 2138 101 3 26 chr18 39220955 39221261 -47456287 - AluSq SINE Alu -14 299 1 200 114 29 0 chr18 39221973 39222008 -47455540 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 419 316 44 6 chr18 39225885 39226043 -47451505 - MIR SINE MIR -85 177 14 836 257 94 35 chr18 39226770 39227089 -47450459 + MLT1I LTR MaLR 70 407 -2 377 336 55 21 chr18 39227165 39227400 -47450148 + MIR SINE MIR 20 262 0 1828 120 21 71 chr18 39227412 39227737 -47449811 - AluSx SINE Alu -3 309 1 262 304 22 11 chr18 39228083 39228175 -47449373 - MER5A DNA MER1_type -3 186 94 705 277 18 31 chr18 39228199 39228423 -47449125 + MIR SINE MIR 21 241 -21 353 283 25 38 chr18 39229411 39229570 -47447978 + MIR SINE MIR 31 187 -75 188 216 0 95 chr18 39229613 39229687 -47447861 + MIR SINE MIR 196 262 0 23 68 0 0 chr18 39229732 39229776 -47447772 + AT_rich Low_complexity Low_complexity 1 44 0 340 282 16 16 chr18 39230002 39230126 -47447422 - L1MC4a LINE L1 -1923 5885 5762 282 241 69 95 chr18 39230245 39230507 -47447041 - L1MC4a LINE L1 -686 5478 5258 328 310 81 20 chr18 39230577 39230774 -47446774 - L1MC4a LINE L1 -987 5159 4951 288 285 62 7 chr18 39230774 39230918 -47446630 - MIR SINE MIR -30 232 81 232 196 22 0 chr18 39235074 39235120 -47442428 + GA-rich Low_complexity Low_complexity 1 47 0 387 0 0 0 chr18 39235142 39235185 -47442363 + (TG)n Simple_repeat Simple_repeat 2 44 0 279 294 0 0 chr18 39236831 39236899 -47440649 + L2 LINE L2 3199 3266 -6 555 320 40 0 chr18 39237095 39237317 -47440231 - MIR SINE MIR -30 232 2 2174 131 51 11 chr18 39239065 39239438 -47438110 - MLT1B LTR MaLR -2 388 1 629 278 6 6 chr18 39239594 39239756 -47437792 - MER5B DNA MER1_type 0 178 17 199 252 146 29 chr18 39239762 39239865 -47437683 - MIR SINE MIR -78 130 16 580 264 127 25 chr18 39240037 39240234 -47437314 + LTR16A LTR ERVL 232 448 -2 2676 199 12 10 chr18 39240703 39241153 -47436395 + MLT2B2 LTR ERVL 3 456 -59 1071 46 13 7 chr18 39241153 39241304 -47436244 + (TCTA)n Simple_repeat Simple_repeat 1 152 0 2676 199 12 10 chr18 39241304 39241365 -47436183 + MLT2B2 LTR ERVL 456 515 0 261 343 37 15 chr18 39243490 39243624 -47433924 + L2 LINE L2 2921 3057 -215 1153 316 86 35 chr18 39243637 39244881 -47432667 + L2 LINE L2 2009 3313 0 22 0 0 0 chr18 39246420 39246442 -47431106 + AT_rich Low_complexity Low_complexity 1 22 0 891 136 68 17 chr18 39246581 39246758 -47430790 + MER53 DNA DNA 4 189 0 532 125 10 21 chr18 39247043 39247139 -47430409 - MER5B DNA MER1_type -15 163 69 1576 12 0 0 chr18 39247153 39247324 -47430224 - AluYa5 SINE Alu -3 308 138 408 212 47 18 chr18 39247502 39247672 -47429876 + (CA)n Simple_repeat Simple_repeat 1 175 0 228 192 58 29 chr18 39247686 39247790 -47429758 + (CA)n Simple_repeat Simple_repeat 1 107 0 228 163 36 30 chr18 39247804 39247970 -47429578 + (CA)n Simple_repeat Simple_repeat 1 167 0 469 185 41 21 chr18 39248097 39248342 -47429206 + (CA)n Simple_repeat Simple_repeat 1 250 0 332 232 46 13 chr18 39248369 39248520 -47429028 + (CA)n Simple_repeat Simple_repeat 1 156 0 195 129 0 0 chr18 39248575 39248606 -47428942 + (CA)n Simple_repeat Simple_repeat 2 32 0 229 270 31 31 chr18 39248613 39248772 -47428776 + (CATA)n Simple_repeat Simple_repeat 1 159 0 * 332 246 22 44 chr18 39248668 39248851 -47428697 + (CA)n Simple_repeat Simple_repeat 2 180 0 222 281 12 41 chr18 39248900 39249071 -47428477 + (CA)n Simple_repeat Simple_repeat 1 166 0 793 255 136 39 chr18 39249076 39249437 -47428111 - MSTD LTR MaLR 0 396 1 1648 176 20 20 chr18 39249543 39249845 -47427703 + AluJo SINE Alu 7 308 -4 21 36 0 0 chr18 39249916 39249944 -47427604 + AT_rich Low_complexity Low_complexity 1 28 0 209 235 0 0 chr18 39250053 39250104 -47427444 - MIR SINE MIR -180 82 32 207 0 0 0 chr18 39251354 39251377 -47426171 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr18 39251468 39251491 -47426057 + (AATAG)n Simple_repeat Simple_repeat 4 26 0 1792 243 162 11 chr18 39251903 39252568 -47424980 - L1MCc LINE L1 -4394 2547 1984 198 103 0 0 chr18 39252568 39252597 -47424951 + (CTA)n Simple_repeat Simple_repeat 1 29 0 1792 243 162 11 chr18 39252597 39253257 -47424291 - L1MCc LINE L1 -4957 1984 994 27 49 0 0 chr18 39253260 39253301 -47424247 + AT_rich Low_complexity Low_complexity 1 41 0 6259 86 75 18 chr18 39253475 39254155 -47423393 - L1PA11 LINE L1 0 6174 5451 207 0 0 0 chr18 39254155 39254178 -47423370 + (TTG)n Simple_repeat Simple_repeat 1 23 0 6259 86 75 18 chr18 39254178 39254485 -47423063 - L1PA11 LINE L1 -723 5451 5163 579 311 17 6 chr18 39254498 39254678 -47422870 - L1MCc LINE L1 -5423 1000 819 648 288 121 51 chr18 39254852 39255325 -47422223 - L1MCc LINE L1 -5897 526 21 1594 251 58 0 chr18 39255330 39255765 -47421783 + L1ME3A LINE L1 5703 6162 -8 458 211 117 47 chr18 39256595 39256723 -47420825 - L1MA10 LINE L1 -39 6295 6159 1890 126 52 4 chr18 39256905 39257176 -47420372 + AluSx SINE Alu 1 284 -28 1664 234 108 7 chr18 39257553 39257971 -47419577 + LTR40b LTR ERVL 1 460 -2 280 294 41 59 chr18 39258224 39258394 -47419154 - L2 LINE L2 -570 2744 2578 22 35 0 0 chr18 39260800 39260829 -47416719 + AT_rich Low_complexity Low_complexity 1 29 0 411 231 19 19 chr18 39260923 39261027 -47416521 + L1ME1 LINE L1 6060 6163 -3 28 29 0 0 chr18 39261400 39261435 -47416113 + AT_rich Low_complexity Low_complexity 1 35 0 364 238 25 33 chr18 39261999 39262121 -47415427 + MIR SINE MIR 141 261 -1 1857 158 87 12 chr18 39263071 39263394 -47414154 + MER7A DNA MER2_type 2 346 0 708 293 105 45 chr18 39263484 39263866 -47413682 - MLT1K LTR MaLR -180 408 4 225 206 0 147 chr18 39264285 39264387 -47413161 + MIR3 SINE MIR 113 199 -9 222 299 59 64 chr18 39264702 39264889 -47412659 - MIR SINE MIR -14 248 63 1300 187 40 124 chr18 39266151 39266547 -47411001 + MLT1A1 LTR MaLR 1 363 -2 192 244 49 61 chr18 39266601 39266683 -47410865 + MER5B DNA MER1_type 92 172 -6 27509 133 10 26 chr18 39266710 39267116 -47410432 - L1PA8 LINE L1 0 6487 6076 185 0 40 0 chr18 39267116 39267141 -47410407 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2173 115 0 0 chr18 39267141 39267428 -47410120 - AluSx SINE Alu -25 287 1 27509 133 10 26 chr18 39267428 39271401 -47406147 - L1PA8 LINE L1 -410 6077 2184 2180 116 3 10 chr18 39271401 39271703 -47405845 + AluSx SINE Alu 1 300 -12 27509 133 10 26 chr18 39271703 39273852 -47403696 - L1PA8 LINE L1 -4303 2184 3 4517 164 28 4 chr18 39273872 39274663 -47402885 - L1MB3 LINE L1 -2 6181 5372 337 301 62 9 chr18 39274696 39274809 -47402739 + MER5B DNA MER1_type 1 119 -59 2715 227 56 87 chr18 39274922 39275037 -47402511 + MER21B LTR ERV1 1 118 -745 2469 118 125 8 chr18 39275037 39275420 -47402128 + MSTA LTR MaLR 1 428 0 2715 227 56 87 chr18 39275420 39276125 -47401423 + MER21B LTR ERV1 118 796 -67 236 224 61 0 chr18 39276375 39276424 -47401124 + MER5B DNA MER1_type 1 52 -126 577 214 50 50 chr18 39277417 39277576 -47399972 + MER63A DNA MER1_type 51 209 -1 306 270 115 52 chr18 39277809 39277983 -47399565 + MIR3 SINE MIR 20 204 -4 188 182 0 0 chr18 39278453 39278486 -47399062 - MIR SINE MIR -7 255 223 182 302 58 12 chr18 39279210 39279296 -47398252 + MIR SINE MIR 112 201 -61 2823 102 6 0 chr18 39279533 39279895 -47397653 + THE1B LTR MaLR 1 364 0 347 328 107 8 chr18 39280059 39280181 -47397367 + L2 LINE L2 3136 3269 -3 184 247 12 111 chr18 39280319 39280400 -47397148 - L2 LINE L2 -27 3286 3214 3129 168 22 36 chr18 39280443 39280960 -47396588 + MLT2B3 LTR ERVL 1 511 -43 519 60 0 0 chr18 39280960 39281027 -47396521 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 3129 168 22 36 chr18 39281027 39281064 -47396484 + MLT2B3 LTR ERVL 511 547 -7 3942 269 92 19 chr18 39281072 39281620 -47395928 - L2 LINE L2 -188 3125 2618 2314 93 7 0 chr18 39281620 39281922 -47395626 - AluSp SINE Alu -8 305 2 3942 269 92 19 chr18 39281922 39282837 -47394711 - L2 LINE L2 -695 2618 1552 708 228 64 61 chr18 39282838 39283136 -47394412 + L1ME3 LINE L1 1906 2207 -4189 1951 118 4 4 chr18 39283136 39283407 -47394141 + AluSg SINE Alu 34 304 -6 708 228 64 61 chr18 39283407 39283467 -47394081 + L1ME3 LINE L1 2207 2265 -4131 3093 243 83 41 chr18 39283477 39284805 -47392743 + L1ME3 LINE L1 2197 3579 -2636 * 6068 161 25 8 chr18 39284803 39285935 -47391613 + L1MC1 LINE L1 5184 6333 0 1338 247 64 18 chr18 39285954 39286408 -47391140 + L1ME3 LINE L1 3564 4038 -2177 44099 32 21 2 chr18 39286924 39292947 -47384601 + L1HS LINE L1 1 6143 -12 793 297 113 27 chr18 39293165 39293767 -47383781 + L1ME3 LINE L1 4546 5199 -1016 8102 27 1 2 chr18 39293794 39295342 -47382206 - L1PA4 LINE L1 -3 6152 4602 350 48 0 0 chr18 39295342 39295384 -47382164 - L1PA4 LINE L1 -95 6060 6019 861 40 0 0 chr18 39295384 39295479 -47382069 + L1PA4 LINE L1 6053 6152 -3 37449 49 3 8 chr18 39295489 39300130 -47377418 - L1PA4 LINE L1 -1527 4619 1 545 315 52 42 chr18 39300241 39300804 -47376744 + L1ME3 LINE L1 5326 5898 -333 400 78 0 0 chr18 39301487 39301538 -47376010 - MER1B DNA MER1_type -7 326 276 * 1023 179 0 6 chr18 39301536 39301704 -47375844 - MER1B DNA MER1_type -128 169 3 338 182 15 0 chr18 39302024 39302090 -47375458 - MLT1K LTR MaLR 0 588 522 434 244 140 52 chr18 39302437 39302630 -47374918 + MIR SINE MIR 46 255 -7 4478 137 54 0 chr18 39303272 39303953 -47373595 + MER72 LTR ERV1 5 722 0 306 234 122 37 chr18 39304014 39304121 -47373427 - MIR SINE MIR -65 197 82 2251 118 0 0 chr18 39304365 39304670 -47372878 + AluSc SINE Alu 1 305 -4 2271 129 103 0 chr18 39304843 39305231 -47372317 - LTR23 LTR ERV1 -9 428 1 207 381 76 0 chr18 39306747 39306865 -47370683 - L3 LINE CR1 -3 1574 1448 1565 206 113 13 chr18 39306876 39307327 -47370221 - LTR54B LTR ERV1 -2 496 1 660 291 86 95 chr18 39307328 39307910 -47369638 - L3 LINE CR1 -136 1441 855 225 24 71 0 chr18 39307910 39307952 -47369596 + T-rich Low_complexity Low_complexity 2 46 0 2079 108 7 0 chr18 39307954 39308231 -47369317 - AluSg SINE Alu -31 279 1 660 291 86 95 chr18 39308231 39308311 -47369237 - L3 LINE CR1 -723 854 782 207 0 0 0 chr18 39308479 39308502 -47369046 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 243 266 153 24 chr18 39308553 39308677 -47368871 - L3 LINE CR1 -1013 564 425 5101 17 11 0 chr18 39308677 39309511 -47368037 - L1PA3 LINE L1 -526 5629 4788 4258 49 4 6 chr18 39309511 39310058 -47367490 + L1PA3 LINE L1 5641 6155 0 562 218 13 0 chr18 39310785 39310941 -47366607 + (TA)n Simple_repeat Simple_repeat 1 158 0 188 281 132 50 chr18 39311282 39311403 -47366145 - MIR3 SINE MIR -75 133 3 559 261 27 37 chr18 39312026 39312214 -47365334 + MIR SINE MIR 4 189 -73 2330 157 51 7 chr18 39312224 39312639 -47364909 + MER4D LTR ERV1 1 433 -470 1075 131 0 0 chr18 39312639 39312792 -47364756 - FRAM SINE Alu -15 161 9 2708 142 14 50 chr18 39312792 39313189 -47364359 + MER4D LTR ERV1 422 799 -104 2006 131 7 7 chr18 39313189 39313479 -47364069 - AluSx SINE Alu -20 292 3 2708 142 14 50 chr18 39313479 39313581 -47363967 + MER4D LTR ERV1 799 903 0 1795 88 13 4 chr18 39313826 39314065 -47363483 - AluSg1 SINE Alu -23 286 46 1844 208 36 18 chr18 39315479 39315868 -47361680 - MSTD LTR MaLR 0 396 1 2079 103 0 0 chr18 39316013 39316284 -47361264 - AluSc SINE Alu -20 289 19 204 40 0 0 chr18 39316333 39316358 -47361190 + (A)n Simple_repeat Simple_repeat 1 25 0 29 0 0 0 chr18 39319179 39319208 -47358340 + AT_rich Low_complexity Low_complexity 1 29 0 199 276 88 65 chr18 39319275 39319445 -47358103 + L3 LINE CR1 1388 1561 -16 314 277 8 25 chr18 39321380 39321499 -47356049 + (CATA)n Simple_repeat Simple_repeat 2 118 0 15295 159 19 38 chr18 39322267 39324871 -47352677 - L1MA2 LINE L1 0 7723 5250 1266 29 12 17 chr18 39324871 39325043 -47352505 + (TTTC)n Simple_repeat Simple_repeat 1 171 0 15295 159 19 38 chr18 39325043 39327150 -47350398 - L1MA2 LINE L1 -2473 5250 3105 357 348 56 6 chr18 39327743 39327904 -47349644 - MIR SINE MIR -44 218 50 2849 10 0 0 chr18 39328072 39328378 -47349170 - AluYa5 SINE Alu -5 306 1 256 185 0 19 chr18 39328386 39328440 -47349108 - MER5B DNA MER1_type -122 56 4 851 268 136 4 chr18 39329156 39329436 -47348112 - MER46C DNA MER2_type -2 336 20 482 261 16 148 chr18 39329454 39329711 -47347837 - MIR SINE MIR -9 253 31 209 106 0 21 chr18 39330640 39330687 -47346861 + (CAAA)n Simple_repeat Simple_repeat 4 49 0 314 307 142 17 chr18 39330791 39330967 -47346581 - MIR SINE MIR -31 231 34 204 239 0 43 chr18 39331154 39331200 -47346348 + MIR SINE MIR 32 75 -133 240 290 169 34 chr18 39332305 39332512 -47345036 + L2 LINE L2 2127 2361 -953 33 56 0 0 chr18 39332655 39332709 -47344839 + AT_rich Low_complexity Low_complexity 1 54 0 1011 238 88 30 chr18 39332714 39333076 -47344472 - L1ME3A LINE L1 -4 6166 5784 25 65 0 0 chr18 39333203 39333249 -47344299 + AT_rich Low_complexity Low_complexity 1 46 0 1515 174 24 44 chr18 39333250 39333544 -47344004 - AluJo SINE Alu -24 288 1 201 39 0 0 chr18 39334204 39334230 -47343318 + (T)n Simple_repeat Simple_repeat 1 26 0 2140 42 0 0 chr18 39334510 39334750 -47342798 + L1PA5 LINE L1 5907 6146 -8 21 36 0 0 chr18 39334750 39334778 -47342770 + AT_rich Low_complexity Low_complexity 1 28 0 306 225 0 12 chr18 39335703 39335783 -47341765 + CT-rich Low_complexity Low_complexity 2 80 0 375 319 155 25 chr18 39335911 39336312 -47341236 - L1ME3A LINE L1 -349 5772 5320 22 0 0 0 chr18 39336396 39336418 -47341130 + AT_rich Low_complexity Low_complexity 1 22 0 238 302 0 0 chr18 39336518 39336582 -47340966 + polypyrimidine Low_complexity Low_complexity 4 106 0 434 300 108 77 chr18 39336615 39337201 -47340347 - L1ME3A LINE L1 -1169 4977 4374 223 167 30 0 chr18 39337509 39337575 -47339973 + (TA)n Simple_repeat Simple_repeat 1 68 0 35 41 0 0 chr18 39337592 39337641 -47339907 + AT_rich Low_complexity Low_complexity 1 49 0 183 42 0 0 chr18 39337784 39337808 -47339740 + (TG)n Simple_repeat Simple_repeat 2 25 0 450 300 130 37 chr18 39337955 39338669 -47338879 - L1ME3A LINE L1 -2671 3475 2665 371 274 129 52 chr18 39340043 39340441 -47337107 + MLT1L LTR MaLR 98 563 -52 1966 158 0 3 chr18 39340441 39340745 -47336803 - AluJb SINE Alu -9 303 1 371 274 129 52 chr18 39340745 39340803 -47336745 + MLT1L LTR MaLR 563 615 0 199 260 10 14 chr18 39341054 39341165 -47336383 - MIR SINE MIR -18 244 90 24 91 0 0 chr18 39341290 39341356 -47336192 + AT_rich Low_complexity Low_complexity 1 66 0 251 253 12 24 chr18 39341829 39341912 -47335636 - L1ME4a LINE L1 -104 6017 5936 363 293 65 69 chr18 39343054 39343286 -47334262 + L2 LINE L2 3078 3308 -5 224 200 107 13 chr18 39343432 39343507 -47334041 - L2 LINE L2 -1589 1725 1644 * 265 347 142 5 chr18 39343469 39343659 -47333889 + L3 LINE CR1 754 969 -608 414 280 179 10 chr18 39343719 39343926 -47333622 - MIR SINE MIR -8 254 13 979 298 117 10 chr18 39343936 39344346 -47333202 + L3 LINE CR1 1040 1493 -84 852 260 78 4 chr18 39345283 39345514 -47332034 - MIR SINE MIR -14 248 1 233 172 35 0 chr18 39345816 39345874 -47331674 + CT-rich Low_complexity Low_complexity 2 61 0 298 363 111 0 chr18 39345888 39346023 -47331525 - L2 LINE L2 -19 3253 3104 671 170 50 14 chr18 39346123 39346264 -47331284 + MER103 DNA DNA 13 158 -8 600 129 24 0 chr18 39346314 39346438 -47331110 + (TCCA)n Simple_repeat Simple_repeat 2 128 0 467 299 186 20 chr18 39346438 39346783 -47330765 - L2 LINE L2 -2 3311 2910 202 300 71 29 chr18 39346879 39346949 -47330599 - L3 LINE CR1 -17 1560 1488 30 27 0 0 chr18 39347630 39347667 -47329881 + AT_rich Low_complexity Low_complexity 1 37 0 268 188 83 0 chr18 39347668 39347716 -47329832 - L1PA8A LINE L1 -3 6128 6077 1742 165 108 15 chr18 39348796 39349130 -47328418 + MLT1A1 LTR MaLR 1 365 0 1442 163 25 8 chr18 39349816 39350056 -47327492 + MSTB LTR MaLR 110 353 -73 1790 177 33 80 chr18 39350345 39350530 -47327018 + MSTB1 LTR MaLR 1 193 -239 2649 148 41 21 chr18 39350530 39350948 -47326600 - MSTB LTR MaLR 0 426 1 1790 177 33 80 chr18 39350948 39351213 -47326335 + MSTB1 LTR MaLR 193 430 -2 258 311 8 66 chr18 39351774 39351896 -47325652 - MER5B DNA MER1_type -61 117 3 769 197 82 111 chr18 39352492 39352943 -47324605 - L1MC5 LINE L1 -35 7926 7489 299 270 40 53 chr18 39353770 39353922 -47323626 + L2 LINE L2 2824 2973 -299 200 320 40 27 chr18 39355768 39355843 -47321705 + MIR SINE MIR 147 222 -40 202 273 23 102 chr18 39356040 39356168 -47321380 - MIR SINE MIR -67 141 24 222 340 66 0 chr18 39356618 39356724 -47320824 + MIR SINE MIR 106 218 -44 1991 180 61 3 chr18 39358071 39358416 -47319132 - MLT1A1 LTR MaLR 0 365 1 3522 216 75 56 chr18 39358421 39359964 -47317584 - MLT1A1-int LTR MaLR -6 1645 1 1849 193 6 12 chr18 39359964 39360301 -47317247 - MLT1A1 LTR MaLR 0 365 31 1918 175 33 84 chr18 39360344 39360473 -47317075 + MER31B LTR ERV1 1 135 -526 2360 99 0 3 chr18 39360473 39360777 -47316771 + AluSc SINE Alu 1 303 -6 1918 175 33 84 chr18 39360777 39361138 -47316410 + MER31B LTR ERV1 135 661 0 298 292 111 93 chr18 39361196 39361628 -47315920 - L2 LINE L2 -421 2893 2454 751 279 49 18 chr18 39361670 39361896 -47315652 - MIR SINE MIR -2 260 28 183 42 0 0 chr18 39361929 39361953 -47315595 + (TG)n Simple_repeat Simple_repeat 1 24 0 201 74 0 0 chr18 39361953 39361980 -47315568 + (GA)n Simple_repeat Simple_repeat 2 28 0 432 229 51 25 chr18 39362267 39362385 -47315163 + MLT2F LTR ERVL 263 383 -280 1426 240 21 36 chr18 39362591 39363088 -47314460 - MLT1-int LTR MaLR -765 606 1 243 213 0 0 chr18 39363090 39363137 -47314411 - MLT2F LTR ERVL -2 661 615 270 193 0 0 chr18 39363139 39363196 -47314352 + (TA)n Simple_repeat Simple_repeat 2 58 0 * 658 229 174 77 chr18 39363187 39363710 -47313838 - MLT2F LTR ERVL -43 620 3 326 265 176 0 chr18 39363935 39364071 -47313477 + L2 LINE L2 3153 3312 -1 203 356 27 0 chr18 39364600 39364673 -47312875 - L2 LINE L2 -1 3271 3197 * 278 253 60 12 chr18 39364655 39364738 -47312810 + MIR SINE MIR 172 258 -4 390 200 88 24 chr18 39365111 39365236 -47312312 - MLT1J LTR MaLR -378 133 1 244 198 69 9 chr18 39366319 39366435 -47311113 + (TA)n Simple_repeat Simple_repeat 2 124 0 182 341 158 0 chr18 39367135 39367217 -47310331 - MIR3 SINE MIR -6 202 108 541 288 111 45 chr18 39367425 39367848 -47309700 - L2 LINE L2 0 3313 2863 277 282 73 32 chr18 39367874 39367998 -47309550 + MER94 DNA DNA 3 131 -3 1046 293 123 9 chr18 39368001 39368380 -47309168 - L2 LINE L2 -671 2643 2172 264 111 0 0 chr18 39368380 39368425 -47309123 + (TCTA)n Simple_repeat Simple_repeat 2 46 0 1046 293 123 9 chr18 39368425 39368629 -47308919 - L2 LINE L2 -1142 2172 1993 2177 89 3 10 chr18 39369830 39370153 -47307395 - AluSq SINE Alu 0 313 1 315 188 80 96 chr18 39371329 39371438 -47306110 - MIR SINE MIR -45 163 57 315 169 153 76 chr18 39371502 39371620 -47305928 + MER5A DNA MER1_type 44 170 -19 248 0 0 30 chr18 39371746 39371779 -47305769 + (CCCCAG)n Simple_repeat Simple_repeat 2 33 0 511 332 73 16 chr18 39372374 39372621 -47304927 - MIR SINE MIR 0 262 2 1268 197 62 45 chr18 39473106 39473462 -47204086 + MLT1A1 LTR MaLR 2 363 -2 704 73 0 0 chr18 39473617 39473713 -47203835 - L1MA1 LINE L1 -3 6299 6204 2311 72 0 29 chr18 39473857 39474164 -47203384 + AluY SINE Alu 1 298 -13 210 154 0 0 chr18 39474510 39474549 -47202999 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 200 320 31 31 chr18 39474992 39475089 -47202459 + L2 LINE L2 3209 3305 -8 439 253 23 27 chr18 39476635 39476794 -47200754 - L1MC3 LINE L1 -218 6141 6010 272 119 24 0 chr18 39476805 39476847 -47200701 + L1MC/D LINE L1 5551 5593 -766 271 236 18 0 chr18 39477605 39477660 -47199888 + L3 LINE CR1 1503 1558 -19 210 91 0 0 chr18 39478260 39478293 -47199255 + (CA)n Simple_repeat Simple_repeat 1 33 0 416 283 53 58 chr18 39478326 39478653 -47198895 + L1ME3A LINE L1 4052 4378 -1768 2242 90 0 3 chr18 39478653 39478952 -47198596 + AluY SINE Alu 1 298 -13 416 283 53 58 chr18 39478952 39479020 -47198528 + L1ME3A LINE L1 4378 4445 -1701 537 269 136 71 chr18 39479247 39480529 -47197019 + L1ME3A LINE L1 4498 5875 -295 270 0 0 0 chr18 39480911 39480941 -47196607 + (CA)n Simple_repeat Simple_repeat 1 30 0 363 287 74 0 chr18 39482070 39482192 -47195356 - MIR SINE MIR -59 149 19 435 83 0 0 chr18 39482192 39482252 -47195296 + (TTCC)n Simple_repeat Simple_repeat 4 63 0 2252 109 0 0 chr18 39482257 39482568 -47194980 - AluSx SINE Alu -1 311 1 292 289 65 7 chr18 39483591 39483725 -47193823 - MER5A DNA MER1_type -16 163 17 3570 289 147 22 chr18 39484782 39486605 -47190943 - L1MEc LINE L1 -1541 4674 2626 * 4918 271 53 33 chr18 39486604 39488732 -47188816 - L1MEc LINE L1 -4095 2301 132 834 246 23 4 chr18 39488731 39488987 -47188561 - L1M4 LINE L1 -3095 3051 2791 * 29 70 0 0 chr18 39489110 39489167 -47188381 + AT_rich Low_complexity Low_complexity 1 57 0 649 291 137 24 chr18 39489454 39489841 -47187707 + L1M4 LINE L1 2564 2906 -3240 1595 209 33 18 chr18 39489841 39490176 -47187372 + MER2 DNA MER2_type 2 341 -3 649 291 137 24 chr18 39490176 39490662 -47186886 + L1M4 LINE L1 2906 3536 -2610 2244 176 188 135 chr18 39490730 39491254 -47186294 - L1MC5 LINE L1 -39 7956 7461 502 224 0 9 chr18 39491254 39491370 -47186178 - MLT1F1 LTR MaLR -449 118 4 2244 176 188 135 chr18 39491370 39492007 -47185541 - L1MC5 LINE L1 -534 7461 6619 268 240 120 48 chr18 39492068 39492193 -47185355 - L1MC4 LINE L1 -1340 6702 6569 22 0 0 0 chr18 39493855 39493877 -47183671 + AT_rich Low_complexity Low_complexity 1 22 0 231 88 0 0 chr18 39493987 39494021 -47183527 + (TCCA)n Simple_repeat Simple_repeat 3 36 0 34 72 0 0 chr18 39495154 39495223 -47182325 + AT_rich Low_complexity Low_complexity 1 69 0 2476 50 10 0 chr18 39495856 39496157 -47181391 + AluY SINE Alu 2 305 -6 1389 57 0 0 chr18 39496511 39496687 -47180861 - AluY SINE Alu -7 304 129 414 285 77 43 chr18 39497594 39497801 -47179747 + LTR50 LTR ERVL 1 214 -581 1314 312 23 13 chr18 39497867 39498579 -47178969 + ERVL LTR ERVL 2345 3067 -2587 25 0 0 0 chr18 39500237 39500262 -47177286 + AT_rich Low_complexity Low_complexity 1 25 0 264 306 31 10 chr18 39501250 39501348 -47176200 - L1MC/D LINE L1 -411 5900 5801 * 1739 239 82 49 chr18 39501340 39502109 -47175439 - L1M4 LINE L1 -2836 3310 2517 830 235 9 100 chr18 39502156 39502496 -47175052 - L1MC/D LINE L1 -1327 4888 4580 1773 289 84 37 chr18 39502508 39503762 -47173786 - L1MC/D LINE L1 -1832 4383 3070 1431 264 58 17 chr18 39503767 39504611 -47172937 - L1MC/D LINE L1 -3157 3058 2158 835 261 55 0 chr18 39504685 39504884 -47172664 + MER58A DNA MER1_type 12 221 -3 21 57 0 0 chr18 39504892 39504927 -47172621 + AT_rich Low_complexity Low_complexity 1 35 0 274 227 135 7 chr18 39504931 39505072 -47172476 - L1MC/D LINE L1 -4385 2011 1853 1491 289 166 34 chr18 39505121 39506639 -47170909 - L1MC/D LINE L1 -4640 1756 39 921 225 24 5 chr18 39506706 39506915 -47170633 - MER115 DNA AcHobo -1 692 480 252 0 0 0 chr18 39507326 39507354 -47170194 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 372 43 0 0 chr18 39507353 39507399 -47170149 + (GA)n Simple_repeat Simple_repeat 1 46 0 425 342 107 8 chr18 39509578 39509841 -47167707 + L2 LINE L2 1999 2287 -1027 2433 259 108 55 chr18 39509846 39511182 -47166366 - L1M4 LINE L1 -902 5244 3821 1997 164 95 63 chr18 39511182 39511447 -47166101 + LTR54 LTR ERV1 1 291 -219 2502 69 0 0 chr18 39511447 39511752 -47165796 - AluY SINE Alu -1 310 6 1997 164 95 63 chr18 39511752 39511980 -47165568 + LTR54 LTR ERV1 291 510 0 2433 259 108 55 chr18 39511980 39512115 -47165433 - L1M4 LINE L1 -2325 3821 3695 * 10527 161 26 35 chr18 39512095 39512496 -47165052 + L1P LINE L1 2429 2832 -3314 2213 109 7 0 chr18 39512496 39512799 -47164749 + AluY SINE Alu 5 309 -2 10527 161 26 35 chr18 39512799 39514394 -47163154 + L1P LINE L1 2832 4409 -1737 198 0 0 0 chr18 39514394 39514416 -47163132 + (CA)n Simple_repeat Simple_repeat 1 22 0 10527 161 26 35 chr18 39514416 39514486 -47163062 + L1P LINE L1 4409 4478 -1668 367 275 106 2 chr18 39514479 39514648 -47162900 - L1M4 LINE L1 -2443 3703 3519 * 345 197 0 0 chr18 39514648 39514719 -47162829 + (TG)n Simple_repeat Simple_repeat 2 72 0 1002 270 90 56 chr18 39514791 39514951 -47162597 - L1M4 LINE L1 -2741 3405 3252 3200 31 3 0 chr18 39514951 39515335 -47162213 - L1PA5 LINE L1 0 6154 5770 1002 270 90 56 chr18 39515335 39516060 -47161488 - L1M4 LINE L1 -2894 3252 2491 851 308 54 69 chr18 39516149 39516975 -47160573 + L2 LINE L2 2449 3273 -40 409 343 25 40 chr18 39517059 39517336 -47160212 - L3b LINE CR1 -86 1497 1225 425 353 29 34 chr18 39518062 39518266 -47159282 + MIR3 SINE MIR 3 205 -3 562 226 32 26 chr18 39518988 39519143 -47158405 - L2 LINE L2 -903 2411 2256 1311 264 38 58 chr18 39519167 39519618 -47157930 + MER74C LTR ERVL 19 460 0 342 0 0 0 chr18 39520074 39520112 -47157436 + (CA)n Simple_repeat Simple_repeat 1 38 0 215 307 13 0 chr18 39521239 39521314 -47156234 + T-rich Low_complexity Low_complexity 5 80 0 284 146 36 0 chr18 39522861 39522916 -47154632 + L1MC2 LINE L1 6031 6087 -257 24 32 0 0 chr18 39522922 39522953 -47154595 + AT_rich Low_complexity Low_complexity 1 31 0 454 194 5 43 chr18 39522989 39523175 -47154373 + (TA)n Simple_repeat Simple_repeat 1 179 0 257 200 67 0 chr18 39523302 39523362 -47154186 - L1MC2 LINE L1 -246 6098 6035 234 0 0 0 chr18 39523362 39523388 -47154160 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 10652 226 36 11 chr18 39523423 39525648 -47151900 - ERVL-B1 LTR ERVL -3226 2538 258 439 288 14 0 chr18 39525702 39525848 -47151700 - ERVL-B1 LTR ERVL -5505 149 2 2135 186 49 63 chr18 39525849 39526376 -47151172 - MLT2B1 LTR ERVL 0 520 1 1586 263 76 19 chr18 39526400 39526982 -47150566 + L1ME1 LINE L1 5520 6134 -32 218 375 29 44 chr18 39527852 39527988 -47149560 + MIR SINE MIR 6 140 -68 324 293 121 13 chr18 39528208 39528365 -47149183 - MIR SINE MIR -24 238 65 1462 213 70 35 chr18 39531327 39531774 -47145774 - MLT2B1 LTR ERVL -2 462 1 260 290 97 93 chr18 39532628 39532928 -47144620 + MLT1K LTR MaLR 126 426 -162 349 241 11 11 chr18 39533121 39533208 -47144340 + L2 LINE L2 3218 3304 -9 225 324 35 41 chr18 39533220 39533365 -47144183 + MLT1K LTR MaLR 443 586 -2 2084 127 0 0 chr18 39533532 39533843 -47143705 - AluSq SINE Alu 0 311 1 2707 10 0 0 chr18 39534434 39534728 -47142820 + AluY SINE Alu 1 294 -17 275 327 18 26 chr18 39535650 39535763 -47141785 + MIR SINE MIR 89 200 -62 573 55 0 0 chr18 39535961 39536034 -47141514 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 24 32 0 0 chr18 39536162 39536193 -47141355 + AT_rich Low_complexity Low_complexity 1 31 0 245 295 32 32 chr18 39536723 39536818 -47140730 - L3 LINE CR1 -178 1399 1305 234 241 0 0 chr18 39538386 39538440 -47139108 - L1MA10 LINE L1 -2 6332 6279 318 231 0 48 chr18 39538540 39538644 -47138904 - L1MA10 LINE L1 -94 6240 6142 1810 103 12 0 chr18 39538648 39538891 -47138657 + AluY SINE Alu 65 310 -1 333 280 92 69 chr18 39538898 39539116 -47138432 - MIR SINE MIR -37 225 3 308 317 54 54 chr18 39540734 39540939 -47136609 + HAL1 LINE L1 99 303 -2204 386 296 64 50 chr18 39541209 39541567 -47135981 + HAL1 LINE L1 589 951 -1556 501 17 0 0 chr18 39541631 39541689 -47135859 + (GA)n Simple_repeat Simple_repeat 1 58 0 299 259 103 26 chr18 39541886 39542002 -47135546 + HAL1 LINE L1 2381 2505 -2 25 0 0 0 chr18 39542003 39542028 -47135520 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr18 39543081 39543104 -47134444 + AT_rich Low_complexity Low_complexity 1 23 0 228 282 146 36 chr18 39543867 39543977 -47133571 - L2 LINE L2 -49 3223 3102 282 255 177 11 chr18 39544816 39544998 -47132550 - MIR SINE MIR -34 228 8 235 208 0 0 chr18 39546000 39546048 -47131500 + MER103 DNA DNA 3 50 -116 1526 177 56 7 chr18 39548709 39549068 -47128480 + AluSx SINE Alu 11 383 0 598 276 24 47 chr18 39549226 39549396 -47128152 + MER58A DNA MER1_type 2 167 0 217 296 76 23 chr18 39549476 39549608 -47127940 - MIR SINE MIR -27 235 97 300 341 63 8 chr18 39550006 39550132 -47127416 + MIR SINE MIR 84 216 -46 302 270 90 80 chr18 39553523 39553723 -47123825 + MLT1L LTR MaLR 193 394 -221 200 325 44 61 chr18 39554889 39555003 -47122545 + L2 LINE L2 2634 2745 -569 1201 204 36 103 chr18 39555155 39555572 -47121976 - LTR52 LTR ERVL -3 418 30 553 261 17 23 chr18 39555898 39556074 -47121474 + MER69A DNA AcHobo 3 177 0 190 338 106 35 chr18 39556262 39556404 -47121144 - L2 LINE L2 -227 3045 2894 197 398 17 25 chr18 39556794 39556912 -47120636 + MIR3 SINE MIR 5 121 -87 321 313 60 18 chr18 39556965 39557131 -47120417 - MIR SINE MIR 0 262 90 2047 140 3 0 chr18 39558265 39558565 -47118983 - AluSx SINE Alu -11 301 1 745 323 161 16 chr18 39561737 39562167 -47115381 + LTR33 LTR ERVL 28 519 -2 704 316 105 21 chr18 39563328 39563806 -47113742 - LTR33 LTR ERVL -3 518 1 328 222 125 56 chr18 39563945 39564089 -47113459 + L1ME LINE L1 2865 3018 -3128 23 0 0 0 chr18 39564217 39564240 -47113308 + AT_rich Low_complexity Low_complexity 1 23 0 1802 150 0 4 chr18 39564240 39564513 -47113035 - AluSx SINE Alu -21 291 20 521 328 78 55 chr18 39564561 39565339 -47112209 + L1ME LINE L1 4337 5132 -1014 2668 314 70 24 chr18 39565341 39566666 -47110882 + L1ME2 LINE L1 3764 5027 -1137 3438 25 44 7 chr18 39566666 39567098 -47110450 - L1PA4 LINE L1 0 6155 5708 2668 314 70 24 chr18 39567098 39567304 -47110244 + L1ME2 LINE L1 5027 5222 -942 2429 98 23 3 chr18 39567304 39567652 -47109896 + THE1A LTR MaLR 1 355 0 2668 314 70 24 chr18 39567652 39567855 -47109693 + L1ME2 LINE L1 5222 5597 -567 21 57 0 0 chr18 39567884 39567919 -47109629 + AT_rich Low_complexity Low_complexity 1 35 0 3084 147 43 34 chr18 39567985 39568639 -47108909 - L1MA8 LINE L1 -20 6271 5612 2082 165 83 1 chr18 39568633 39569305 -47108243 + L1MA8 LINE L1 4911 5618 -673 * 978 233 73 36 chr18 39569302 39569720 -47107828 + L1ME2 LINE L1 5716 6333 -1 * 327 305 30 48 chr18 39569873 39570204 -47107344 + L1ME LINE L1 5258 5582 -580 246 299 108 19 chr18 39571039 39571196 -47106352 - HAL1 LINE L1 -110 2397 2227 259 243 56 35 chr18 39572404 39572548 -47105000 - L1M4 LINE L1 -1444 4702 4556 22 0 0 0 chr18 39572548 39572570 -47104978 + AT_rich Low_complexity Low_complexity 1 22 0 633 192 102 34 chr18 39572707 39572884 -47104664 + MER5A DNA MER1_type 1 189 0 275 371 100 6 chr18 39572897 39573067 -47104481 + MIR SINE MIR 76 261 -1 1191 226 48 32 chr18 39573960 39574331 -47103217 + MLT1B LTR MaLR 14 390 0 1224 225 0 12 chr18 39574739 39574979 -47102569 - AluJb SINE Alu -75 237 1 21 0 0 0 chr18 39575119 39575140 -47102408 + AT_rich Low_complexity Low_complexity 1 21 0 208 210 95 61 chr18 39575978 39576068 -47101480 - MIR SINE MIR -67 141 45 24 32 0 0 chr18 39576624 39576655 -47100893 + AT_rich Low_complexity Low_complexity 1 31 0 229 344 94 8 chr18 39576744 39576872 -47100676 - L2 LINE L2 0 3272 3134 187 260 42 52 chr18 39577943 39578039 -47099509 - L2 LINE L2 -188 3084 2990 295 343 106 88 chr18 39578177 39578451 -47099097 - L2 LINE L2 0 3272 2994 3996 121 18 21 chr18 39579488 39580100 -47097448 - LTR9 LTR ERV1 0 612 3 1408 131 40 6 chr18 39580884 39581319 -47096229 + LTR54 LTR ERV1 1 510 0 229 357 14 0 chr18 39582125 39582195 -47095353 - L2 LINE L2 -52 3220 3150 1820 204 35 60 chr18 39583678 39584198 -47093350 + LTR31 LTR ERV1 104 610 -9 4040 124 8 14 chr18 39585500 39586137 -47091411 - MER41B LTR ERV1 -2 633 1 529 301 11 28 chr18 39586706 39586882 -47090666 - L2 LINE L2 -1938 1376 1204 485 270 84 5 chr18 39587141 39587387 -47090161 - L1M4 LINE L1 -387 5791 5514 456 279 68 21 chr18 39587389 39587579 -47089969 - L2 LINE L2 -2154 1160 962 305 348 30 49 chr18 39588274 39588438 -47089110 + MER91A DNA MER1_type 19 179 -17 234 203 34 0 chr18 39589883 39589942 -47087606 - MLT1G1 LTR MaLR -1 594 534 234 219 12 49 chr18 39589943 39590025 -47087523 - MLT1H LTR MaLR -150 405 327 5783 111 2 31 chr18 39590127 39590960 -47086588 - L1PA14 LINE L1 -3 6158 5303 252 0 0 0 chr18 39590960 39590988 -47086560 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1728 89 129 4 chr18 39590989 39591237 -47086311 - AluY SINE Alu -32 279 1 5783 111 2 31 chr18 39591237 39591576 -47085972 - L1PA14 LINE L1 -857 5304 4993 7858 183 21 6 chr18 39591576 39593219 -47084329 + L1PA14 LINE L1 3321 4988 -1158 372 285 35 11 chr18 39593221 39593403 -47084145 - MLT1H LTR MaLR -341 208 1 893 260 112 81 chr18 39594191 39594521 -47083027 - MLT1H LTR MaLR 0 549 198 2208 117 0 3 chr18 39594521 39594819 -47082729 - AluSx SINE Alu -15 297 1 893 260 112 81 chr18 39594819 39594980 -47082568 - MLT1H LTR MaLR -351 198 43 1054 291 36 27 chr18 39595235 39595647 -47081901 - HsTC2a DNA Tc2 -328 416 1 245 204 0 19 chr18 39596409 39596463 -47081085 - MIR3 SINE MIR -38 170 118 305 225 25 25 chr18 39596468 39596548 -47081000 - L2 LINE L2 0 3313 3234 246 326 11 11 chr18 39596547 39596636 -47080912 - MIR SINE MIR -97 111 23 * 1548 255 58 32 chr18 39597762 39598414 -47079134 - L1MEc LINE L1 -5693 703 35 22 0 0 0 chr18 39599389 39599411 -47078137 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 39599451 39599475 -47078073 + AT_rich Low_complexity Low_complexity 1 24 0 4343 179 58 70 chr18 39600847 39601095 -47076453 - HSMAR2 DNA Mariner -1 1301 1052 7654 28 0 1 chr18 39601095 39602047 -47075501 + L1PA3 LINE L1 5205 6155 0 4343 179 58 70 chr18 39602047 39603114 -47074434 - HSMAR2 DNA Mariner -250 1052 2 180 281 134 24 chr18 39603979 39604061 -47073487 - L3 LINE CR1 -155 1422 1332 257 247 43 0 chr18 39604080 39604173 -47073375 + (TA)n Simple_repeat Simple_repeat 1 97 0 21 0 0 0 chr18 39604846 39604867 -47072681 + AT_rich Low_complexity Low_complexity 1 21 0 3126 79 44 9 chr18 39605079 39605467 -47072081 + MLT2A1 LTR ERVL 1 407 -37 435 106 0 0 chr18 39605467 39605533 -47072015 + (TA)n Simple_repeat Simple_repeat 2 67 0 3126 79 44 9 chr18 39605533 39605573 -47071975 + MLT2A1 LTR ERVL 407 444 0 189 264 57 0 chr18 39607454 39607507 -47070041 - L2 LINE L2 -5 3308 3253 243 61 0 0 chr18 39608437 39608470 -47069078 + (TATG)n Simple_repeat Simple_repeat 4 36 0 1965 139 0 36 chr18 39608470 39608763 -47068785 - AluSx SINE Alu -27 285 2 2698 42 0 0 chr18 39610411 39610722 -47066826 - AluY SINE Alu 0 311 1 21 36 0 0 chr18 39610900 39610928 -47066620 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr18 39611823 39611859 -47065689 + AT_rich Low_complexity Low_complexity 1 36 0 801 226 14 63 chr18 39612542 39612730 -47064818 + MIR SINE MIR 11 188 -74 2327 102 0 3 chr18 39612730 39613034 -47064514 + AluY SINE Alu 1 303 -8 801 226 14 63 chr18 39613034 39613066 -47064482 + MIR SINE MIR 188 220 -42 679 227 0 7 chr18 39613263 39613404 -47064144 + MER20 DNA MER1_type 80 219 0 2561 58 0 6 chr18 39616622 39616934 -47060614 - AluY SINE Alu -1 310 1 504 228 79 48 chr18 39617206 39617395 -47060153 - MIR3 SINE MIR -11 197 3 288 282 68 53 chr18 39619485 39619697 -47057851 - MIR SINE MIR -16 246 35 582 261 60 48 chr18 39621903 39622152 -47055396 - MIR SINE MIR 0 262 11 1850 133 25 32 chr18 39623355 39623670 -47053878 + AluSq SINE Alu 1 313 0 206 158 0 26 chr18 39626136 39626174 -47051374 + A-rich Low_complexity Low_complexity 2 38 0 2245 108 3 0 chr18 39627347 39627652 -47049896 - AluSq SINE Alu -5 308 3 195 42 0 0 chr18 39628145 39628169 -47049379 + (TTCC)n Simple_repeat Simple_repeat 3 26 0 1032 210 16 0 chr18 39628580 39628766 -47048782 - MER5A DNA MER1_type 0 189 1 2431 66 0 10 chr18 39629481 39629782 -47047766 + AluY SINE Alu 1 298 -13 37 39 0 0 chr18 39629985 39630036 -47047512 + AT_rich Low_complexity Low_complexity 1 51 0 195 344 37 48 chr18 39630554 39630743 -47046805 + L2 LINE L2 2674 2860 -454 707 205 68 6 chr18 39630745 39630906 -47046642 + MLT1B LTR MaLR 1 171 -219 258 95 0 0 chr18 39630925 39630967 -47046581 + (TC)n Simple_repeat Simple_repeat 2 43 0 664 253 28 6 chr18 39631018 39631200 -47046348 + MLT1B LTR MaLR 189 374 0 1214 193 98 51 chr18 39631210 39631649 -47045899 - MLT2B1 LTR ERVL 0 414 1 184 313 92 53 chr18 39631783 39631914 -47045634 + L2 LINE L2 2934 3069 -203 24 0 0 0 chr18 39631959 39631983 -47045565 + AT_rich Low_complexity Low_complexity 1 24 0 4605 113 48 77 chr18 39633521 39634329 -47043219 + LTR1 LTR ERV1 1 785 0 2195 98 28 0 chr18 39634671 39634956 -47042592 + AluSp SINE Alu 10 302 -11 2068 175 24 73 chr18 39634956 39635460 -47042088 - LTR9 LTR ERV1 -133 479 1 198 227 15 45 chr18 39636365 39636431 -47041117 - MIR SINE MIR -14 248 185 357 238 0 0 chr18 39637510 39637590 -47039958 - L1MB7 LINE L1 -358 5820 5741 250 160 0 20 chr18 39637586 39637636 -47039912 + L1MB7 LINE L1 5794 5842 -400 * 233 234 93 28 chr18 39637738 39637845 -47039703 + L1MB7 LINE L1 6060 6173 -11 251 216 0 0 chr18 39638090 39638141 -47039407 + MER46C DNA MER2_type 79 129 -209 354 238 95 0 chr18 39638209 39638293 -47039255 + MER46C DNA MER2_type 242 333 -5 366 23 0 0 chr18 39638413 39638456 -47039092 + (CA)n Simple_repeat Simple_repeat 1 43 0 2945 243 69 30 chr18 39639375 39640370 -47037178 - L1ME1 LINE L1 -5 6161 5120 393 22 0 0 chr18 39640370 39640416 -47037132 + (TAGA)n Simple_repeat Simple_repeat 3 48 0 2945 243 69 30 chr18 39640416 39640570 -47036978 - L1ME1 LINE L1 -1046 5120 4973 317 289 60 35 chr18 39641144 39641345 -47036203 + L1M4 LINE L1 2558 2763 -3383 1018 116 17 46 chr18 39642392 39642565 -47034983 - AluSx SINE Alu -1 311 144 757 87 0 0 chr18 39642565 39642657 -47034891 - AluSx SINE Alu -219 93 2 306 67 0 0 chr18 39642669 39642714 -47034834 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 806 305 108 36 chr18 39642820 39643619 -47033929 + L1MCa LINE L1 900 1946 -4661 * 9224 110 23 18 chr18 39643607 39645733 -47031815 + L1PA10 LINE L1 3905 6037 -131 254 349 28 0 chr18 39696113 39696219 -46981329 - MER5A DNA MER1_type -44 145 37 211 282 221 41 chr18 39696788 39696983 -46980565 + MIR SINE MIR 33 262 0 254 336 41 45 chr18 39697238 39697530 -46980018 + L3b LINE CR1 1112 1402 -181 1097 261 49 39 chr18 39697777 39698187 -46979361 + MLT1C LTR MaLR 52 465 -2 339 302 52 83 chr18 39699733 39699925 -46977623 - MIR SINE MIR -26 236 51 451 298 54 42 chr18 39700824 39700992 -46976556 + MIR SINE MIR 36 205 -57 193 319 103 26 chr18 39702314 39702430 -46975118 - MIR3 SINE MIR -78 130 6 391 308 30 38 chr18 39702573 39702940 -46974608 - L1M4 LINE L1 -2632 3514 3151 287 308 71 16 chr18 39703031 39703284 -46974264 - L1M4 LINE L1 -3183 2963 2697 4601 267 74 22 chr18 39703381 39706042 -46971506 - L1ME1 LINE L1 -36 6130 3328 407 321 131 39 chr18 39706714 39707074 -46970474 + MLT1J1 LTR MaLR 66 446 0 425 286 109 20 chr18 39707814 39708054 -46969494 + LTR33A LTR ERVL 258 517 -6 292 295 107 40 chr18 39708984 39709133 -46968415 + MLT1J2 LTR MaLR 113 271 -179 5903 155 82 24 chr18 39709165 39709927 -46967621 - Tigger1 DNA MER2_type 0 2418 1569 2021 158 0 0 chr18 39709927 39710237 -46967311 + AluSx SINE Alu 1 310 -2 5903 155 82 24 chr18 39710237 39710590 -46966958 - Tigger1 DNA MER2_type -849 1569 1238 9110 83 4 2 chr18 39710590 39711848 -46965700 - L1P LINE L1 -859 5287 4028 5974 57 0 72 chr18 39711848 39712716 -46964832 + L1PA7 LINE L1 5328 6141 -13 6888 157 48 7 chr18 39712717 39713931 -46963617 - Tigger1 DNA MER2_type -1154 1264 1 13929 159 20 19 chr18 39714098 39717801 -46959747 - L1 LINE L1 -1022 6543 2850 5532 133 17 3 chr18 39717801 39719078 -46958470 + L1PA15 LINE L1 4876 6165 0 13929 159 20 19 chr18 39719078 39719723 -46957825 - L1 LINE L1 -4715 2850 2207 416 254 46 56 chr18 39719741 39719938 -46957610 - L1MEd LINE L1 -5064 1055 861 208 197 14 14 chr18 39721411 39721482 -46956066 + (TA)n Simple_repeat Simple_repeat 1 71 0 227 266 89 25 chr18 39721942 39722021 -46955527 + Charlie7 DNA MER1_type 2 85 -2527 544 281 67 6 chr18 39722302 39722466 -46955082 - MER5A DNA MER1_type -6 183 10 1794 141 63 41 chr18 39722546 39722908 -46954640 - THE1C LTR MaLR -5 370 1 233 247 13 52 chr18 39722909 39722986 -46954562 - LTR16A LTR ERVL -360 90 17 382 335 38 59 chr18 39723568 39723858 -46953690 - ERVL LTR ERVL -1071 4693 4410 541 341 57 9 chr18 39723904 39724133 -46953415 - LTR16A LTR ERVL -105 345 106 1109 220 93 95 chr18 39724245 39724395 -46953153 - LTR48B LTR ERV1 0 644 495 2013 155 7 7 chr18 39724395 39724705 -46952843 + AluSx SINE Alu 3 312 0 1109 220 93 95 chr18 39724705 39725199 -46952349 - LTR48B LTR ERV1 -149 495 1 2181 127 0 3 chr18 39725240 39725548 -46952000 + AluSx SINE Alu 1 307 -5 2348 149 52 75 chr18 39725738 39726273 -46951275 + MER4D LTR ERV1 3 549 -354 2111 106 0 0 chr18 39726273 39726547 -46951001 + AluY SINE Alu 1 274 -37 543 31 0 0 chr18 39726550 39726615 -46950933 + (GAAA)n Simple_repeat Simple_repeat 3 67 0 2348 149 52 75 chr18 39726615 39726638 -46950910 + MER4D LTR ERV1 530 552 -351 1292 219 163 77 chr18 39726638 39727146 -46950402 + MLT2B3 LTR ERVL 3 554 0 1970 175 8 3 chr18 39727148 39727502 -46950046 + MER4D LTR ERV1 548 903 0 233 344 21 0 chr18 39728065 39728161 -46949387 + MIR SINE MIR 58 155 -107 25 83 0 0 chr18 39728231 39728291 -46949257 + AT_rich Low_complexity Low_complexity 1 60 0 201 314 0 0 chr18 39728850 39728901 -46948647 + GA-rich Low_complexity Low_complexity 5 55 0 605 259 53 5 chr18 39729571 39729760 -46947788 - MIR SINE MIR -5 257 60 867 333 109 51 chr18 39730313 39731617 -46945931 + L2 LINE L2 1933 3312 -1 214 263 18 0 chr18 39732389 39732446 -46945102 + GA-rich Low_complexity Low_complexity 1 58 0 315 0 0 0 chr18 39732456 39732491 -46945057 + (TG)n Simple_repeat Simple_repeat 2 36 0 220 379 76 38 chr18 39732751 39733203 -46944345 + L2 LINE L2 2568 3049 -223 182 290 16 16 chr18 39733270 39733332 -46944216 + L2 LINE L2 3165 3226 -87 180 125 0 0 chr18 39733357 39733389 -46944159 + (CA)n Simple_repeat Simple_repeat 2 33 0 1108 150 122 20 chr18 39735171 39735417 -46942131 + THE1C LTR MaLR 105 375 0 23 0 0 0 chr18 39735734 39735757 -46941791 + AT_rich Low_complexity Low_complexity 1 23 0 271 305 19 0 chr18 39736025 39736130 -46941418 + MER103 DNA DNA 46 152 -14 417 323 78 88 chr18 39736824 39737624 -46939924 - HAL1 LINE L1 -753 1754 963 430 95 32 0 chr18 39738014 39738077 -46939471 - Alu SINE Alu -22 290 226 202 229 9 67 chr18 39738613 39738718 -46938830 + A-rich Low_complexity Low_complexity 1 99 0 199 119 56 32 chr18 39738935 39739061 -46938487 + (TA)n Simple_repeat Simple_repeat 1 129 0 520 290 119 42 chr18 39739116 39739279 -46938269 + HAL1 LINE L1 1370 1519 -988 2393 87 0 0 chr18 39739279 39739578 -46937970 + AluY SINE Alu 1 299 -12 520 290 119 42 chr18 39739578 39739824 -46937724 + HAL1 LINE L1 1519 1811 -696 831 200 24 0 chr18 39740421 39740586 -46936962 - MER105 DNA DNA -31 173 5 180 390 63 0 chr18 39740728 39740823 -46936725 + L2 LINE L2 3204 3304 -9 292 276 26 62 chr18 39740903 39741037 -46936511 + MIR SINE MIR 51 178 -76 207 0 0 0 chr18 39742140 39742163 -46935385 + (ATTTG)n Simple_repeat Simple_repeat 2 24 0 296 64 21 0 chr18 39742733 39742780 -46934768 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 289 252 13 chr18 39744188 39744347 -46933201 + MIR SINE MIR 66 262 0 1032 261 67 19 chr18 39745342 39745714 -46931834 - HsTC2 DNA Tc2 -61 1837 1272 2731 23 3 0 chr18 39746389 39746697 -46930851 + AluY SINE Alu 1 309 -2 262 290 0 0 chr18 39747769 39747838 -46929710 + MIR SINE MIR 77 145 -117 237 322 119 34 chr18 39748291 39748468 -46929080 + MIR SINE MIR 5 196 -66 587 266 79 0 chr18 39748779 39748956 -46928592 - MIR SINE MIR -16 246 56 224 280 0 0 chr18 39750688 39750738 -46926810 - L2 LINE L2 -8 3264 3215 321 232 0 0 chr18 39751003 39751059 -46926489 - L2 LINE L2 -67 3246 3191 847 213 35 20 chr18 39751304 39751501 -46926047 - MER3 DNA MER1_type -5 204 5 308 361 53 23 chr18 39751666 39751799 -46925749 + L2 LINE L2 3125 3261 -11 188 238 79 32 chr18 39754067 39754130 -46923418 - L2 LINE L2 -2 3311 3246 220 254 0 55 chr18 39754286 39754341 -46923207 + L2 LINE L2 3211 3262 -10 217 128 0 51 chr18 39754325 39754364 -46923184 - L2 LINE L2 -12 3301 3265 * 1523 176 45 70 chr18 39755683 39756057 -46921491 - MLT1A1 LTR MaLR 0 365 1 297 364 57 11 chr18 39756913 39757089 -46920459 - MIR3 SINE MIR -9 199 16 251 396 35 0 chr18 39757222 39757366 -46920182 + MIR3 SINE MIR 44 192 -16 23 0 0 0 chr18 39758159 39758182 -46919366 + AT_rich Low_complexity Low_complexity 1 23 0 365 242 114 90 chr18 39758276 39758487 -46919061 - MIR SINE MIR -26 236 21 973 294 70 30 chr18 39758963 39759618 -46917930 - L2 LINE L2 0 3313 2625 202 189 0 0 chr18 39759758 39759795 -46917753 + (TCCA)n Simple_repeat Simple_repeat 2 38 0 1431 259 40 35 chr18 39759901 39760345 -46917203 - L1ME2 LINE L1 -19 6145 5696 1587 194 35 0 chr18 39760345 39760629 -46916919 - AluJo SINE Alu -18 294 1 1431 259 40 35 chr18 39760629 39760732 -46916816 - L1ME2 LINE L1 -468 5696 5595 260 250 94 0 chr18 39760741 39760837 -46916711 - L1ME2 LINE L1 -781 5381 5277 707 292 91 49 chr18 39761129 39762070 -46915478 + L1ME3A LINE L1 2120 3129 -3017 1552 181 0 27 chr18 39762070 39762362 -46915186 - AluJo SINE Alu -17 295 12 707 292 91 49 chr18 39762362 39762676 -46914872 + L1ME3A LINE L1 3129 3428 -2718 25 31 0 0 chr18 39762683 39762715 -46914833 + AT_rich Low_complexity Low_complexity 1 32 0 1344 305 34 2 chr18 39762785 39763227 -46914321 - LTR16C LTR ERVL 0 491 36 931 299 104 29 chr18 39763302 39763658 -46913890 + L1ME3A LINE L1 3679 4007 -2139 2386 70 0 13 chr18 39763658 39763970 -46913578 + AluY SINE Alu 1 308 -3 931 299 104 29 chr18 39763970 39764710 -46912838 + L1ME3A LINE L1 4007 4854 -1292 698 269 48 31 chr18 39764938 39765085 -46912463 + L1P1 LINE L1 5037 5180 -975 1491 213 50 34 chr18 39765085 39765466 -46912082 - MLT1B LTR MaLR -3 387 1 698 269 48 31 chr18 39765466 39765829 -46911719 + L1P1 LINE L1 5180 5540 -615 303 322 79 9 chr18 39765894 39766108 -46911440 + L1ME3A LINE L1 5711 5939 -231 443 234 24 133 chr18 39766187 39766435 -46911113 + L1MC4 LINE L1 6774 6994 -1048 837 285 172 17 chr18 39766438 39766792 -46910756 - MLT1E3 LTR MaLR -3 621 213 1412 225 65 56 chr18 39766793 39767330 -46910218 + L1MC4 LINE L1 7381 7922 -120 21 0 0 0 chr18 39767353 39767374 -46910174 + AT_rich Low_complexity Low_complexity 1 21 0 244 267 0 0 chr18 39767675 39767735 -46909813 + GA-rich Low_complexity Low_complexity 3 62 0 1426 227 21 94 chr18 39767824 39768305 -46909243 + MLT2B1 LTR ERVL 1 446 -74 348 130 0 0 chr18 39768327 39768396 -46909152 + (TG)n Simple_repeat Simple_repeat 2 70 0 361 284 39 24 chr18 39768446 39768573 -46908975 - MER5A DNA MER1_type -10 179 51 * 403 287 63 14 chr18 39768464 39768607 -46908941 + MER5A DNA MER1_type 38 187 -2 556 266 121 4 chr18 39768717 39768965 -46908583 - L1MC4 LINE L1 -385 7657 7381 649 291 62 14 chr18 39768966 39769200 -46908348 + MLT1E3 LTR MaLR 213 468 -158 436 363 102 20 chr18 39769214 39769984 -46907564 + L2 LINE L2 2376 3210 -103 345 172 0 0 chr18 39770013 39770077 -46907471 + (TA)n Simple_repeat Simple_repeat 1 64 0 222 289 88 26 chr18 39770160 39770274 -46907274 + L2 LINE L2 3193 3313 0 3118 84 63 0 chr18 39770954 39771380 -46906168 - MLT2A2 LTR ERVL 0 453 1 648 214 79 89 chr18 39771862 39772165 -46905383 + MLT1D LTR MaLR 1 300 -205 258 32 0 0 chr18 39773443 39773474 -46904074 + (TG)n Simple_repeat Simple_repeat 2 32 0 653 257 17 6 chr18 39773583 39773758 -46903790 + MER5B DNA MER1_type 2 178 0 311 346 48 24 chr18 39774873 39775081 -46902467 + L2 LINE L2 2228 2440 -874 381 243 131 0 chr18 39775308 39775415 -46902133 - MIR SINE MIR -109 153 33 1234 218 78 115 chr18 39775459 39776266 -46901282 - L1MC4 LINE L1 0 8042 7266 4847 241 59 53 chr18 39776436 39777883 -46899665 - L1MC4a LINE L1 0 7808 6344 1785 165 17 41 chr18 39777883 39778228 -46899320 + MER1B DNA MER1_type 1 337 0 4847 241 59 53 chr18 39778228 39778810 -46898738 - L1MC4a LINE L1 -1464 6344 5767 271 279 63 9 chr18 39781087 39781198 -46896350 + MIR SINE MIR 53 169 -93 1311 262 98 20 chr18 39781786 39782236 -46895312 + MLT1D LTR MaLR 21 505 0 1758 176 10 10 chr18 39782270 39782565 -46894983 + AluJo SINE Alu 1 295 -17 286 305 164 45 chr18 39782691 39783045 -46894503 - L3 LINE CR1 -121 1456 1061 707 206 77 5 chr18 39783807 39784001 -46893547 + MER2 DNA MER2_type 2 209 -136 301 194 81 0 chr18 39784046 39784108 -46893440 + MER2 DNA MER2_type 278 344 -1 408 262 29 52 chr18 39784113 39784314 -46893234 + L1MC4a LINE L1 6458 6621 -1187 221 316 10 20 chr18 39784314 39784412 -46893136 + (CATATA)n Simple_repeat Simple_repeat 6 102 0 2554 215 94 113 chr18 39784417 39784870 -46892678 + L1MC4 LINE L1 6618 7078 -964 180 111 0 0 chr18 39784870 39784897 -46892651 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 2554 215 94 113 chr18 39784897 39785892 -46891656 + L1MC4 LINE L1 7078 8040 -2 9142 208 17 19 chr18 39786660 39786729 -46890819 + L1PA16 LINE L1 2939 3007 -3159 2054 125 30 3 chr18 39786729 39787025 -46890523 + AluSg SINE Alu 1 304 -6 9142 208 17 19 chr18 39787025 39790170 -46887378 + L1PA16 LINE L1 3007 6141 -25 2274 125 3 0 chr18 39790170 39790481 -46887067 - AluSx SINE Alu 0 312 1 224 225 211 0 chr18 39790513 39790584 -46886964 + MIR3 SINE MIR 120 205 -3 428 184 13 0 chr18 39791733 39791809 -46885739 + MIR SINE MIR 170 246 -16 195 69 0 0 chr18 39792432 39792461 -46885087 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 285 278 9 28 chr18 39792541 39792649 -46884899 - LTR16A1 LTR ERVL -304 153 48 937 201 48 5 chr18 39793259 39793448 -46884100 + MLT1A1 LTR MaLR 169 365 0 640 328 64 8 chr18 39793467 39793903 -46883645 - HERV16 LTR ERVL -1925 3071 2667 413 364 32 14 chr18 39793987 39794267 -46883281 - HERV16 LTR ERVL -3462 1534 1250 358 333 75 29 chr18 39795132 39795411 -46882137 - HERV16 LTR ERVL -4704 292 1 917 240 50 68 chr18 39795411 39795794 -46881754 - LTR16A1 LTR ERVL 0 457 82 262 259 17 0 chr18 39796109 39796167 -46881381 - L2 LINE L2 -5 3308 3250 282 29 0 0 chr18 39796759 39796794 -46880754 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1217 238 51 34 chr18 39798219 39798689 -46878859 + L1ME3 LINE L1 5484 5961 -201 682 297 158 6 chr18 39798873 39799196 -46878352 - L2 LINE L2 0 3313 2942 204 211 0 0 chr18 39799241 39799279 -46878269 + CT-rich Low_complexity Low_complexity 3 40 0 304 258 39 70 chr18 39799930 39800058 -46877490 - MIR3 SINE MIR -20 188 65 207 245 10 20 chr18 39800982 39800998 -46876550 + CT-rich Low_complexity Low_complexity 1 16 -85 4581 124 24 29 chr18 39800998 39801781 -46875767 + MER4E LTR ERV1 1 779 0 207 245 10 20 chr18 39801781 39801866 -46875682 + CT-rich Low_complexity Low_complexity 16 101 0 2305 83 3 10 chr18 39803655 39803955 -46873593 + AluY SINE Alu 1 298 -13 260 238 35 33 chr18 39804409 39804551 -46872997 + MIR SINE MIR 22 228 -34 1909 93 107 4 chr18 39805160 39805430 -46872118 + AluY SINE Alu 1 298 -13 1482 194 45 11 chr18 39806140 39806408 -46871140 + AluJo SINE Alu 6 282 -30 189 0 0 0 chr18 39806412 39806433 -46871115 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 316 300 100 8 chr18 39807288 39807408 -46870140 - MIR3 SINE MIR -49 159 29 283 259 42 79 chr18 39807417 39807591 -46869957 + MIR3 SINE MIR 31 204 -4 928 209 29 59 chr18 39809435 39809742 -46867806 - MLT1A1 LTR MaLR -50 315 18 180 238 200 25 chr18 39809774 39809854 -46867694 + MIR SINE MIR 86 179 -83 1430 180 71 7 chr18 39809904 39810198 -46867350 + MER7A DNA MER2_type 31 341 -5 270 0 0 0 chr18 39811073 39811103 -46866445 + (TG)n Simple_repeat Simple_repeat 2 31 0 317 286 98 42 chr18 39811443 39811782 -46865766 - L1ME LINE L1 -521 5645 5290 406 182 91 27 chr18 39812447 39812557 -46864991 + MER53 DNA DNA 10 126 -63 2013 142 0 22 chr18 39812565 39812876 -46864672 + AluSx SINE Alu 1 304 -8 284 211 40 0 chr18 39812922 39812998 -46864550 + MER53 DNA DNA 111 189 0 186 337 12 23 chr18 39812999 39813085 -46864463 + MIR SINE MIR 30 114 -148 32 43 0 0 chr18 39813361 39813407 -46864141 + AT_rich Low_complexity Low_complexity 1 46 0 502 304 61 0 chr18 39813655 39813836 -46863712 - MIR SINE MIR -52 210 19 475 273 8 8 chr18 39814932 39815053 -46862495 - L2 LINE L2 -4 3309 3189 259 139 56 19 chr18 39815327 39815435 -46862113 + (TA)n Simple_repeat Simple_repeat 1 112 0 474 303 33 13 chr18 39815665 39815817 -46861731 - MIR3 SINE MIR -50 158 4 240 270 120 10 chr18 39817202 39817302 -46860246 + MLT1K LTR MaLR 132 242 -346 770 246 11 11 chr18 39818401 39818588 -46858960 - MER5A DNA MER1_type 0 189 3 608 322 61 43 chr18 39818790 39819119 -46858429 - L3 LINE CR1 -112 1465 1131 1888 141 59 31 chr18 39819250 39819604 -46857944 - THE1B LTR MaLR 0 364 1 10854 101 8 0 chr18 39819609 39821170 -46856378 - THE1B-int LTR MaLR -6 1574 1 2151 133 48 20 chr18 39821170 39821524 -46856024 - THE1B LTR MaLR 0 364 1 852 209 62 126 chr18 39821524 39821918 -46855630 + MLT1D LTR MaLR 20 389 -1 443 319 107 9 chr18 39822196 39822412 -46855136 + L3 LINE CR1 341 577 -1000 606 285 127 4 chr18 39822874 39823102 -46854446 - MIR SINE MIR -5 257 2 513 363 124 32 chr18 39823191 39823665 -46853883 + L3 LINE CR1 1059 1576 -1 549 198 90 9 chr18 39824635 39824746 -46852802 + FLAM_C SINE Alu 3 122 -21 474 256 0 47 chr18 39824881 39825010 -46852538 + FLAM_A SINE Alu 2 124 -9 21 0 0 0 chr18 39825726 39825747 -46851801 + AT_rich Low_complexity Low_complexity 1 21 0 5146 141 13 18 chr18 39825890 39826799 -46850749 + L1PA16 LINE L1 5260 6164 -2 756 258 117 110 chr18 39827866 39829809 -46847739 - L1ME3 LINE L1 -226 5870 3941 2440 84 0 0 chr18 39829809 39830108 -46847440 - AluY SINE Alu -12 299 1 756 258 117 110 chr18 39830108 39830304 -46847244 - L1ME3 LINE L1 -2155 3941 3748 665 92 0 0 chr18 39830304 39830414 -46847134 - AluSg/x SINE Alu 0 305 196 756 258 117 110 chr18 39830414 39831087 -46846461 - L1ME3 LINE L1 -2348 3748 2943 * 837 239 14 55 chr18 39831084 39831373 -46846175 + L1ME1 LINE L1 5707 5983 -181 415 233 0 45 chr18 39831376 39831509 -46846039 + L1ME1 LINE L1 6037 6163 -3 201 162 0 0 chr18 39831930 39831967 -46845581 + A-rich Low_complexity Low_complexity 1 37 0 224 132 94 0 chr18 39832371 39832424 -46845124 + (TTTG)n Simple_repeat Simple_repeat 1 58 0 195 42 0 0 chr18 39833438 39833462 -46844086 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3265 91 2 7 chr18 39834049 39834487 -46843061 - MLT2A1 LTR ERVL -8 436 1 5025 73 15 6 chr18 39834487 39835157 -46842391 - HERVL-A1 LTR ERVL 0 5654 4979 6050 80 0 0 chr18 39835161 39835924 -46841624 - HERVL-A1 LTR ERVL -1889 3765 3003 11186 129 17 23 chr18 39835966 39837825 -46839723 - L1P3 LINE L1 -4600 1861 6 1994 231 55 83 chr18 39837867 39838981 -46838567 - L1M4 LINE L1 -990 5156 4074 415 299 64 24 chr18 39839004 39839306 -46838242 - L1ME3 LINE L1 -5072 998 725 348 286 90 45 chr18 39839333 39839623 -46837925 - L1ME3 LINE L1 -5448 622 320 308 236 85 19 chr18 39839744 39839850 -46837698 - L1ME3 LINE L1 -5908 162 50 25 31 0 0 chr18 39839898 39839930 -46837618 + AT_rich Low_complexity Low_complexity 1 32 0 322 259 122 37 chr18 39839996 39840185 -46837363 - HAL1 LINE L1 -715 1792 1588 393 313 91 62 chr18 39840261 39840667 -46836881 - HAL1 LINE L1 -1553 954 537 1640 184 16 13 chr18 39840789 39841093 -46836455 - AluJo SINE Alu -7 305 1 25 95 0 0 chr18 39841158 39841232 -46836316 + AT_rich Low_complexity Low_complexity 1 74 0 276 293 162 10 chr18 39842117 39842216 -46835332 - L2 LINE L2 0 3313 3200 218 250 43 141 chr18 39842436 39842528 -46835020 - L2 LINE L2 0 3313 3231 289 294 62 55 chr18 39844394 39844540 -46833008 - MIR SINE MIR -20 242 96 22 35 0 0 chr18 39846050 39846079 -46831469 + AT_rich Low_complexity Low_complexity 1 29 0 2254 334 36 32 chr18 39846568 39847691 -46829857 + ERVL LTR ERVL 3586 4713 -1051 1110 161 36 0 chr18 39847806 39847999 -46829549 + MLT1A1 LTR MaLR 141 340 -25 554 327 66 52 chr18 39848654 39849061 -46828487 + LTR33 LTR ERVL 42 454 -67 282 254 149 15 chr18 39849143 39849277 -46828271 + MIR SINE MIR 76 227 -35 219 215 0 0 chr18 39849287 39849352 -46828196 + (TTA)n Simple_repeat Simple_repeat 3 67 0 2526 183 15 47 chr18 39849439 39849974 -46827574 - LTR26B LTR ERV1 -7 524 7 483 248 8 0 chr18 39850397 39850431 -46827117 - L1MA10 LINE L1 -21 6313 6280 2197 228 66 31 chr18 39850431 39851110 -46826438 - L1ME1 LINE L1 -47 6537 5835 6777 248 68 47 chr18 39851126 39853103 -46824445 - L1ME1 LINE L1 -775 5789 3681 2451 57 0 3 chr18 39853103 39853399 -46824149 + AluY SINE Alu 1 295 -16 6777 248 68 47 chr18 39853399 39854873 -46822675 - L1ME1 LINE L1 -2883 3681 2238 330 136 0 0 chr18 39854875 39854919 -46822629 + Alu SINE Alu 236 279 -23 183 42 0 0 chr18 39854934 39854958 -46822590 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2133 91 11 0 chr18 39854958 39855232 -46822316 - AluSc SINE Alu -32 277 1 516 260 33 12 chr18 39855249 39855478 -46822070 + L1MEc LINE L1 1771 1966 -4460 1180 211 17 0 chr18 39855485 39855717 -46821831 - AluJb SINE Alu -76 236 1 349 289 65 70 chr18 39856094 39856531 -46821017 - L1ME1 LINE L1 -5634 411 27 279 330 0 19 chr18 39857423 39857526 -46820022 - L3 LINE CR1 -438 1139 1039 360 298 101 47 chr18 39857759 39858044 -46819504 - MER102a DNA MER1_type -2 328 29 190 103 0 0 chr18 39858319 39858348 -46819200 - L2 LINE L2 0 3313 3285 707 214 107 11 chr18 39858908 39859095 -46818453 + MIR SINE MIR 34 238 -24 434 339 0 0 chr18 39859139 39859266 -46818282 - MIR SINE MIR -128 134 8 225 0 0 0 chr18 39861834 39861859 -46815689 + (T)n Simple_repeat Simple_repeat 1 25 0 230 286 35 85 chr18 39862150 39862349 -46815199 + L2 LINE L2 3123 3311 -2 222 284 79 0 chr18 39862744 39862826 -46814722 + MIR SINE MIR 69 146 -62 308 271 40 45 chr18 39863205 39863382 -46814166 + LTR16C LTR ERVL 316 491 0 207 0 0 0 chr18 39863418 39863441 -46814107 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1577 181 25 44 chr18 39864715 39865036 -46812512 - MER58B DNA MER1_type -13 328 14 1327 223 44 9 chr18 39865058 39865377 -46812171 + MER63 DNA MER1_type 432 761 -300 2051 134 0 10 chr18 39865736 39866042 -46811506 - AluSg SINE Alu -7 303 1 1981 175 20 6 chr18 39866261 39866615 -46810933 - MLT1A1 LTR MaLR 0 365 7 398 299 27 0 chr18 39866857 39867004 -46810544 + (TA)n Simple_repeat Simple_repeat 2 152 0 4153 158 45 16 chr18 39868067 39868827 -46808721 + Tigger1 DNA MER2_type 1 782 -1636 272 335 110 30 chr18 39868957 39869121 -46808427 - MIR3 SINE MIR -28 180 4 595 294 12 0 chr18 39869717 39869880 -46807668 - MIR3 SINE MIR -14 194 30 618 316 128 40 chr18 39870634 39871291 -46806257 + L2 LINE L2 721 1473 -1841 825 209 170 10 chr18 39871291 39871497 -46806051 - MER8 DNA MER2_type 0 239 1 618 316 128 40 chr18 39871497 39871698 -46805850 + L2 LINE L2 1473 1655 -1659 181 353 0 0 chr18 39871791 39871842 -46805706 - L2 LINE L2 -81 3191 3141 21 57 0 0 chr18 39872530 39872565 -46804983 + AT_rich Low_complexity Low_complexity 1 35 0 364 172 516 0 chr18 39872804 39872926 -46804622 - MER5A DNA MER1_type -4 185 1 2183 87 3 3 chr18 39873306 39873592 -46803956 + AluY SINE Alu 1 286 -25 543 31 0 0 chr18 39873599 39873664 -46803884 + (GA)n Simple_repeat Simple_repeat 2 66 0 286 286 151 54 chr18 39873851 39874110 -46803438 + L2 LINE L2 3028 3311 -2 1510 248 47 30 chr18 39875193 39875769 -46801779 - L1ME3 LINE L1 -93 6069 5484 282 29 0 0 chr18 39877194 39877229 -46800319 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 262 259 17 0 chr18 39877821 39877879 -46799669 + L2 LINE L2 3250 3308 -5 917 240 50 68 chr18 39878194 39878577 -46798971 + LTR16A1 LTR ERVL 82 457 0 358 333 75 29 chr18 39878577 39878856 -46798692 + HERV16 LTR ERVL 1 292 -4704 413 364 32 14 chr18 39879721 39880001 -46797547 + HERV16 LTR ERVL 1250 1534 -3462 685 329 61 7 chr18 39880085 39880522 -46797026 + HERV16 LTR ERVL 2667 3131 -1925 937 201 48 5 chr18 39880541 39880730 -46796818 - MLT1A1 LTR MaLR 0 365 169 285 278 9 28 chr18 39881340 39881448 -46796100 + LTR16A1 LTR ERVL 48 153 -304 195 69 0 0 chr18 39881528 39881557 -46795991 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 428 184 13 0 chr18 39882180 39882256 -46795292 - MIR SINE MIR -16 246 170 229 225 211 0 chr18 39883405 39883476 -46794072 - MIR3 SINE MIR -3 205 120 2191 118 3 0 chr18 39883508 39883804 -46793744 + AluSx SINE Alu 1 297 -15 923 260 137 109 chr18 39883808 39884899 -46792649 + L1ME3 LINE L1 3937 5057 -1089 629 282 113 8 chr18 39884938 39885728 -46791820 + L1ME3 LINE L1 5036 5916 -246 4984 136 14 14 chr18 39886803 39887708 -46789840 - L1PA16 LINE L1 -2 6164 5260 487 254 0 46 chr18 39888587 39888717 -46788831 - FLAM_A SINE Alu -8 125 2 554 198 90 9 chr18 39888852 39888963 -46788585 - FLAM_C SINE Alu -21 122 3 510 363 124 32 chr18 39889933 39890407 -46787141 - L3 LINE CR1 -1 1576 1059 606 285 127 4 chr18 39890496 39890724 -46786824 + MIR SINE MIR 2 257 -5 441 319 107 9 chr18 39891186 39891402 -46786146 - L3 LINE CR1 -1000 577 341 781 212 62 126 chr18 39891680 39892074 -46785474 - MLT1D LTR MaLR -1 625 20 2164 130 48 20 chr18 39892074 39892428 -46785120 + THE1B LTR MaLR 1 364 0 10844 101 8 0 chr18 39892428 39893989 -46783559 + THE1B-int LTR MaLR 1 1574 -6 1895 141 59 31 chr18 39893994 39894348 -46783200 + THE1B LTR MaLR 1 364 0 628 318 64 40 chr18 39894479 39894806 -46782742 + L3 LINE CR1 1131 1465 -112 794 241 11 11 chr18 39895008 39895195 -46782353 + MER5A DNA MER1_type 3 189 0 240 270 120 10 chr18 39896295 39896395 -46781153 - MLT1K LTR MaLR -346 242 132 288 0 0 0 chr18 39897718 39897750 -46779798 + (TG)n Simple_repeat Simple_repeat 1 32 0 345 62 0 0 chr18 39897750 39897798 -46779750 + (GA)n Simple_repeat Simple_repeat 2 49 0 428 330 123 6 chr18 39899282 39899461 -46778087 - MIR SINE MIR -38 224 25 730 287 39 12 chr18 39899476 39899730 -46777818 - MIR SINE MIR 0 262 2 259 318 140 22 chr18 39900734 39900913 -46776635 - MIR SINE MIR -50 212 13 293 225 101 77 chr18 39902365 39902534 -46775014 - MIR SINE MIR -74 188 16 195 306 63 18 chr18 39903428 39903539 -46774009 + MIR SINE MIR 81 196 -66 287 287 93 0 chr18 39906609 39906738 -46770810 - MER58C DNA MER1_type -18 197 57 221 75 25 0 chr18 39907910 39907950 -46769598 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 219 69 0 0 chr18 39908114 39908143 -46769405 + (TA)n Simple_repeat Simple_repeat 1 29 0 257 385 8 15 chr18 39908347 39908477 -46769071 + L2 LINE L2 3142 3270 -2 244 280 27 73 chr18 39909531 39909681 -46767867 - MLT1K LTR MaLR -28 560 418 1974 212 24 40 chr18 39909779 39910284 -46767264 - MLT1D LTR MaLR -6 499 3 244 298 57 24 chr18 39913563 39913687 -46763861 + MLT1J LTR MaLR 380 507 -4 410 92 62 0 chr18 39913844 39913909 -46763639 + L1PA10 LINE L1 6100 6168 0 215 231 0 19 chr18 39915285 39915337 -46762211 + (CAT)n Simple_repeat Simple_repeat 2 52 0 306 194 0 0 chr18 39915791 39915858 -46761690 + (CA)n Simple_repeat Simple_repeat 1 67 0 205 290 145 86 chr18 39916108 39916329 -46761219 + L3 LINE CR1 1344 1577 0 303 317 93 25 chr18 39916935 39917096 -46760452 + HAL1 LINE L1 48 219 -2288 2142 276 94 70 chr18 39917167 39918634 -46758914 + HAL1 LINE L1 290 1720 -787 1896 131 18 0 chr18 39918634 39918917 -46758631 + AluSx SINE Alu 1 288 -24 198 0 0 0 chr18 39918920 39918942 -46758606 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 2142 276 94 70 chr18 39918942 39919353 -46758195 + HAL1 LINE L1 1721 2218 -289 183 156 0 0 chr18 39919375 39919407 -46758141 + (TG)n Simple_repeat Simple_repeat 2 33 0 294 73 0 0 chr18 39919905 39919946 -46757602 + (TG)n Simple_repeat Simple_repeat 2 42 0 435 303 41 0 chr18 39920215 39920360 -46757188 - MIR SINE MIR -6 256 106 195 100 0 0 chr18 39922128 39922158 -46755390 + (CA)n Simple_repeat Simple_repeat 2 31 0 444 37 0 0 chr18 39922396 39922450 -46755098 + (CA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr18 39922572 39922593 -46754955 + AT_rich Low_complexity Low_complexity 1 21 0 404 321 43 5 chr18 39922946 39923133 -46754415 - MIR SINE MIR -39 223 30 1884 201 17 6 chr18 39923428 39923787 -46753761 + MLT1A1 LTR MaLR 3 365 0 207 301 114 32 chr18 39926735 39926858 -46750690 - L2 LINE L2 -4 3268 3136 200 189 0 0 chr18 39926982 39927019 -46750529 - L2 LINE L2 -219 3053 3017 330 319 68 25 chr18 39927332 39927739 -46749809 + LTR33 LTR ERVL 53 517 -4 21 71 0 0 chr18 39930294 39930336 -46747212 + AT_rich Low_complexity Low_complexity 1 42 0 282 234 16 16 chr18 39930872 39930936 -46746612 - L2 LINE L2 -57 3256 3193 331 331 40 68 chr18 39931326 39931516 -46746032 - MIR SINE MIR -56 206 25 286 306 11 27 chr18 39932837 39932978 -46744570 + MIR SINE MIR 35 175 -80 321 298 204 21 chr18 39933407 39933598 -46743950 - MIR SINE MIR -34 228 3 218 296 102 20 chr18 39933632 39933730 -46743818 - L2 LINE L2 -8 3264 3159 399 302 47 47 chr18 39933954 39934169 -46743379 + MIR SINE MIR 16 230 -32 24 0 0 0 chr18 39934352 39934376 -46743172 + AT_rich Low_complexity Low_complexity 1 24 0 219 305 34 0 chr18 39936712 39936771 -46740777 - MER91 DNA MER1_type -3 137 77 2441 76 0 0 chr18 39937411 39937712 -46739836 - AluY SINE Alu -10 301 1 209 213 49 33 chr18 39939451 39939500 -46738048 + L2 LINE L2 3003 3055 -217 2191 103 91 24 chr18 39939500 39939841 -46737707 + THE1B LTR MaLR 1 364 0 209 213 49 33 chr18 39939841 39939852 -46737696 + L2 LINE L2 3055 3064 -208 255 278 75 75 chr18 39939955 39940088 -46737460 - MIR SINE MIR -110 152 20 262 242 63 42 chr18 39940435 39940530 -46737018 + L1MC4 LINE L1 6614 6710 -1332 280 341 67 67 chr18 39942049 39942304 -46735244 - L2 LINE L2 -92 3180 2926 197 341 46 75 chr18 39942342 39942647 -46734901 - L2 LINE L2 -561 2753 2458 512 187 47 5 chr18 39943424 39943549 -46733999 - L1MA9 LINE L1 0 6291 6167 288 0 0 0 chr18 39943549 39943581 -46733967 + (TG)n Simple_repeat Simple_repeat 2 33 0 3973 172 62 54 chr18 39943676 39944344 -46733204 - L1MA9 LINE L1 -191 6121 5460 316 104 0 0 chr18 39944344 39944392 -46733156 + U5 snRNA snRNA 1 48 -68 3973 172 62 54 chr18 39944392 39945450 -46732098 - L1MA9 LINE L1 -852 5460 4332 1483 191 19 10 chr18 39945457 39945766 -46731782 + L1MA9 LINE L1 4045 4356 -1790 180 284 39 90 chr18 39946789 39946944 -46730604 + MIR SINE MIR 46 192 -70 387 0 0 0 chr18 39947123 39947166 -46730382 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 393 22 0 0 chr18 39947932 39947978 -46729570 + (TG)n Simple_repeat Simple_repeat 1 46 0 236 382 0 0 chr18 39948935 39949058 -46728490 + L3b LINE CR1 1116 1238 -345 201 39 0 0 chr18 39950489 39950515 -46727033 + (A)n Simple_repeat Simple_repeat 1 26 0 446 287 33 0 chr18 39951144 39951266 -46726282 + MIR3 SINE MIR 77 202 -6 24 32 0 0 chr18 39951694 39951725 -46725823 + AT_rich Low_complexity Low_complexity 1 31 0 440 289 122 56 chr18 39952554 39953004 -46724544 - MLT1G1 LTR MaLR -7 588 109 266 316 58 52 chr18 39953473 39953647 -46723901 + L3 LINE CR1 1324 1498 -79 200 297 0 0 chr18 39953832 39953896 -46723652 + A-rich Low_complexity Low_complexity 1 64 0 221 369 45 25 chr18 39955017 39955174 -46722374 - L3 LINE CR1 -117 1460 1301 293 277 101 47 chr18 39955182 39955330 -46722218 + L2 LINE L2 1329 1484 -1830 923 321 46 22 chr18 39955369 39955780 -46721768 + L2 LINE L2 1740 2160 -1154 388 262 110 38 chr18 39955786 39956103 -46721445 - HAL1 LINE L1 -5 2502 2163 1904 94 138 5 chr18 39956186 39956539 -46721009 + LTR7 LTR ERV1 1 450 0 21 36 0 0 chr18 39957643 39957671 -46719877 + AT_rich Low_complexity Low_complexity 1 28 0 4209 183 37 41 chr18 39958319 39958771 -46718777 + L1MB3 LINE L1 4744 5196 -987 354 22 0 0 chr18 39958771 39958817 -46718731 + L1PA3 LINE L1 6110 6155 0 4209 183 37 41 chr18 39958817 39959810 -46717738 + L1MB3 LINE L1 5196 6183 0 211 290 159 0 chr18 39959886 39959955 -46717593 - MIR3 SINE MIR -12 196 117 871 210 0 28 chr18 39960194 39960370 -46717178 + MER58B DNA MER1_type 168 338 -3 271 349 39 8 chr18 39964222 39964351 -46713197 - MIR3 SINE MIR -66 142 10 557 298 117 20 chr18 39964443 39964742 -46712806 + MARNA DNA Mariner 166 493 -93 305 264 22 55 chr18 39965234 39965325 -46712223 + MIR3 SINE MIR 115 202 -6 236 292 0 0 chr18 39965786 39965851 -46711697 + MIR3 SINE MIR 137 201 -7 26 50 0 0 chr18 39966252 39966292 -46711256 + AT_rich Low_complexity Low_complexity 1 40 0 1684 165 41 10 chr18 39966463 39966754 -46710794 - AluJb SINE Alu -12 300 1 364 307 52 13 chr18 39966959 39967112 -46710436 + MIR SINE MIR 100 258 -4 585 99 22 0 chr18 39967506 39967597 -46709951 + AluSp/q SINE Alu 212 304 -9 746 279 81 5 chr18 39967682 39967904 -46709644 - MER8 DNA MER2_type 0 239 1 2139 114 0 0 chr18 39968386 39968711 -46708837 + AluSc SINE Alu 3 327 0 21 36 0 0 chr18 39969350 39969378 -46708170 + AT_rich Low_complexity Low_complexity 1 28 0 228 394 155 0 chr18 39970431 39970573 -46706975 + MIR3 SINE MIR 13 176 -32 7374 135 55 8 chr18 39971645 39972887 -46704661 - HSMAR2 DNA Mariner 0 1302 3 429 260 0 0 chr18 39973592 39973692 -46703856 - Charlie1a DNA MER1_type -1280 175 76 363 203 63 0 chr18 39974940 39975019 -46702529 + MER103 DNA DNA 2 85 -81 32 0 0 0 chr18 39975203 39975235 -46702313 + AT_rich Low_complexity Low_complexity 1 32 0 739 218 96 34 chr18 39975279 39975548 -46702000 - MLT1B LTR MaLR -157 310 18 1819 232 61 77 chr18 39975548 39976233 -46701315 - LTR8 LTR ERV1 -2 689 16 297 294 0 0 chr18 39976583 39976651 -46700897 + MER34 LTR ERV1 1 68 -474 314 213 250 15 chr18 39976759 39976895 -46700653 + LTR48 LTR ERV1 323 490 -297 293 57 0 0 chr18 39976906 39976941 -46700607 + THE1B LTR MaLR 323 357 -7 692 175 63 21 chr18 39977076 39977262 -46700286 + THE1C LTR MaLR 1 193 -171 390 311 0 0 chr18 39977602 39977705 -46699843 - L2 LINE L2 -7 3306 3204 343 335 77 31 chr18 39979273 39979349 -46698199 + L1M4 LINE L1 3715 3786 -2360 1901 134 18 63 chr18 39979349 39979730 -46697818 + THE1B LTR MaLR 1 364 0 343 335 77 31 chr18 39979730 39980331 -46697217 + L1M4 LINE L1 3786 4423 -1723 350 318 125 33 chr18 39980473 39980778 -46696770 + L1M4 LINE L1 4496 4828 -1318 21 57 0 0 chr18 39981013 39981048 -46696500 + AT_rich Low_complexity Low_complexity 1 35 0 186 43 0 0 chr18 39981666 39981689 -46695859 + (TATG)n Simple_repeat Simple_repeat 2 24 0 1894 201 38 29 chr18 39981799 39982335 -46695213 + MLT2A2 LTR ERVL 5 554 0 421 208 110 80 chr18 39982608 39982872 -46694676 - ORSL DNA AcHobo -3 272 1 2221 118 48 28 chr18 39982938 39983295 -46694253 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr18 39983758 39983779 -46693769 + AT_rich Low_complexity Low_complexity 1 21 0 320 172 0 17 chr18 39983874 39983932 -46693616 - MER112 DNA MER1_type -203 57 1 180 152 0 0 chr18 39984007 39984040 -46693508 + G-rich Low_complexity Low_complexity 3 35 0 279 0 0 0 chr18 39984555 39984586 -46692962 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 342 0 0 0 chr18 39984585 39984623 -46692925 + (TG)n Simple_repeat Simple_repeat 1 38 0 201 305 0 17 chr18 39985075 39985134 -46692414 + MER5A DNA MER1_type 7 64 -125 1090 194 211 0 chr18 39988382 39988629 -46688919 - AluJb SINE Alu 0 302 4 258 247 95 68 chr18 39988790 39988980 -46688568 - MER112 DNA MER1_type -47 213 19 1679 220 52 45 chr18 39989444 39989908 -46687640 - MLT1C LTR MaLR 0 467 1 386 259 40 76 chr18 39990961 39991288 -46686260 + L1M4c LINE L1 1299 1760 -4803 5854 164 72 91 chr18 39991547 39992652 -46684896 + L1MCa LINE L1 45 1114 -5312 1668 188 53 39 chr18 39992652 39993008 -46684540 + MLT1A1 LTR MaLR 5 365 0 5854 164 72 91 chr18 39993008 39993447 -46684101 + L1MCa LINE L1 1114 1560 -4866 1709 268 96 47 chr18 39993605 39995021 -46682527 + L1M4b LINE L1 1224 2879 -4259 1480 209 7 10 chr18 39995021 39995323 -46682225 + AluJo SINE Alu 1 301 -11 1709 268 96 47 chr18 39995323 39995498 -46682050 + L1M4b LINE L1 2879 3044 -4094 183 222 0 0 chr18 39995500 39995545 -46682003 + (CATA)n Simple_repeat Simple_repeat 2 46 0 328 332 65 32 chr18 39995954 39996171 -46681377 + MLT1J2 LTR MaLR 4 227 -223 983 213 72 3 chr18 39996203 39996494 -46681054 + MER33 DNA MER1_type 13 323 -1 1491 206 3 21 chr18 39996716 39997003 -46680545 - AluJo SINE Alu -30 282 1 802 220 78 32 chr18 39997280 39997667 -46679881 - L1MDa LINE L1 -3890 2674 2383 * 3027 234 29 19 chr18 39997663 39998482 -46679066 - L1MC2 LINE L1 -1 6737 5911 1386 230 41 30 chr18 39998538 39999098 -46678450 - L1MC2 LINE L1 -1378 5162 4597 1276 275 132 51 chr18 39999131 39999821 -46677727 + L1M3e LINE L1 -699 46 -6260 2375 249 71 32 chr18 39999879 40001725 -46675823 + L1M3e LINE L1 911 2649 -3733 539 195 8 17 chr18 40001724 40001842 -46675706 - L1MDa LINE L1 -5197 848 732 * 3274 105 16 36 chr18 40001854 40002360 -46675188 + LTR3b LTR ERVK 1 496 -4 343 73 0 0 chr18 40002361 40002402 -46675146 + LTR3b LTR ERVK 460 500 0 1665 247 74 62 chr18 40002403 40003050 -46674498 - L1MDa LINE L1 -5321 724 70 5708 241 91 57 chr18 40003086 40005369 -46672179 - L1MC2 LINE L1 -4172 2368 9 536 359 92 33 chr18 40005376 40005769 -46671779 + L2 LINE L2 2898 3313 0 392 326 110 18 chr18 40006779 40006997 -46670551 - L2 LINE L2 -193 3120 2883 1139 210 28 127 chr18 40009911 40010043 -46667505 - MLT1B LTR MaLR 0 390 246 1392 192 59 19 chr18 40010043 40010358 -46667190 - AluJb SINE Alu 0 327 2 1139 210 28 127 chr18 40010358 40010657 -46666891 - MLT1B LTR MaLR -144 246 1 200 111 28 0 chr18 40010765 40010801 -46666747 + CT-rich Low_complexity Low_complexity 1 37 0 2090 141 0 25 chr18 40010884 40011204 -46666344 - AluSx SINE Alu 0 312 1 385 292 44 105 chr18 40011697 40012012 -46665536 + MLT1J LTR MaLR 111 406 -105 2121 116 3 3 chr18 40012183 40012476 -46665072 - AluSp SINE Alu -20 293 1 286 295 144 0 chr18 40012580 40012719 -46664829 + MIR SINE MIR 53 211 -51 215 292 86 44 chr18 40012880 40012998 -46664550 - MIR SINE MIR -81 127 2 627 254 91 72 chr18 40013240 40013516 -46664032 - MER21A LTR ERV1 -123 808 528 639 232 137 16 chr18 40013538 40013728 -46663820 - MER21B LTR ERV1 -511 352 140 309 309 67 51 chr18 40014367 40014545 -46663003 + MIR SINE MIR 80 260 -2 753 285 153 28 chr18 40015497 40016100 -46661448 + L1MC4a LINE L1 5263 5940 -1868 26 30 0 0 chr18 40016339 40016372 -46661176 + AT_rich Low_complexity Low_complexity 1 33 0 842 306 20 60 chr18 40017588 40017935 -46659613 - LTR16A LTR ERVL 0 450 118 338 301 48 0 chr18 40018769 40018872 -46658676 + MIR SINE MIR 21 128 -80 384 22 0 0 chr18 40019135 40019180 -46658368 + (TG)n Simple_repeat Simple_repeat 2 46 0 461 263 71 76 chr18 40019551 40019868 -46657680 - LTR33 LTR ERVL -90 431 56 461 291 41 50 chr18 40020235 40020436 -46657112 - MIR SINE MIR -32 230 32 1125 224 98 40 chr18 40020897 40021221 -46656327 + MER39 LTR ERV1 258 472 -93 2213 108 3 0 chr18 40021221 40021517 -46656031 + AluY SINE Alu 1 297 -14 1125 224 98 40 chr18 40021517 40021617 -46655931 + MER39 LTR ERV1 472 565 0 208 308 39 0 chr18 40021832 40021910 -46655638 + L2 LINE L2 3182 3262 -51 22 35 0 0 chr18 40023209 40023238 -46654310 + AT_rich Low_complexity Low_complexity 1 29 0 310 312 65 24 chr18 40024284 40024454 -46653094 - MIR3 SINE MIR -2 206 30 705 286 95 9 chr18 40024643 40024874 -46652674 + MIR SINE MIR 7 257 -5 759 319 133 7 chr18 40025248 40025807 -46651741 - L2 LINE L2 0 3313 2664 213 286 250 24 chr18 40025803 40025971 -46651577 - MIR SINE MIR -42 220 15 * 247 254 14 0 chr18 40027099 40027170 -46650378 - MLT1J2 LTR MaLR -287 163 92 1790 164 48 10 chr18 40028484 40028777 -46648771 + AluSx SINE Alu 3 306 -6 1243 191 93 77 chr18 40030455 40030843 -46646705 + MSTD LTR MaLR 1 394 -2 1627 194 59 0 chr18 40031665 40031989 -46645559 + MER2 DNA MER2_type 1 343 -1 183 42 0 0 chr18 40032056 40032080 -46645468 + (CTTG)n Simple_repeat Simple_repeat 2 25 0 * 817 193 8 0 chr18 40032077 40032338 -46645210 + CT-rich Low_complexity Low_complexity 1 263 0 545 328 44 11 chr18 40032747 40032930 -46644618 + MIR SINE MIR 48 236 -26 359 315 45 18 chr18 40032985 40033096 -46644452 - MIR SINE MIR -64 144 31 2013 144 7 10 chr18 40034008 40034314 -46643234 - AluJb SINE Alu -7 305 1 324 319 208 0 chr18 40034636 40034852 -46642696 + L1M4 LINE L1 4016 4276 -1870 531 172 52 0 chr18 40034948 40035064 -46642484 - THE1B LTR MaLR 0 364 243 7396 99 36 0 chr18 40035207 40036282 -46641266 + THE1-int LTR MaLR 319 1432 -148 213 376 129 11 chr18 40036545 40036731 -46640817 - L2 LINE L2 -1143 2171 1964 2220 92 7 3 chr18 40036731 40037035 -46640513 + AluY SINE Alu 1 305 -6 1129 147 0 0 chr18 40037279 40039339 -46638209 - ALR/Alpha Satellite centromeric 0 2060 1 1397 214 97 26 chr18 40040867 40041288 -46636260 + LTR40b LTR ERVL 1 451 -11 1380 254 189 19 chr18 40041440 40042011 -46635537 - L2 LINE L2 -910 2404 1737 2109 106 0 7 chr18 40042034 40042316 -46635232 - AluSq SINE Alu -31 282 3 324 195 232 0 chr18 40042507 40042589 -46634959 - AluJ/FLAM SINE Alu -201 101 1 1084 174 7 0 chr18 40043296 40051986 -46625562 - ALR/Alpha Satellite centromeric 0 8752 1 904 184 7 0 chr18 40052119 40053121 -46624427 - ALR/Alpha Satellite centromeric 0 1009 1 336 223 0 0 chr18 40053745 40053848 -46623700 + GA-rich Low_complexity Low_complexity 3 105 0 719 282 86 5 chr18 40055580 40055789 -46621759 - MIR SINE MIR -16 246 21 22 0 0 0 chr18 40056019 40056041 -46621507 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 40057053 40057075 -46620473 + AT_rich Low_complexity Low_complexity 1 22 0 252 0 0 0 chr18 40057804 40057832 -46619716 + (T)n Simple_repeat Simple_repeat 1 28 0 228 326 163 28 chr18 40058575 40058790 -46618758 + L3b LINE CR1 1325 1568 -15 234 283 19 19 chr18 40060192 40060298 -46617250 + GA-rich Low_complexity Low_complexity 2 107 0 237 329 0 0 chr18 40060616 40060686 -46616862 - MIR SINE MIR -97 111 42 191 343 10 50 chr18 40060790 40060889 -46616659 + MER5A DNA MER1_type 71 165 -24 473 180 80 30 chr18 40060907 40061007 -46616541 - MER5A DNA MER1_type -84 105 1 636 268 36 12 chr18 40061015 40061183 -46616365 + MER5B DNA MER1_type 1 172 -6 284 232 116 21 chr18 40061463 40061558 -46615990 + MER5A DNA MER1_type 38 141 -48 181 222 56 37 chr18 40061512 40061566 -46615982 - MER5A DNA MER1_type -84 105 51 * 22 35 0 0 chr18 40061847 40061876 -46615672 + AT_rich Low_complexity Low_complexity 1 29 0 2202 120 0 3 chr18 40061884 40062183 -46615365 - AluSx SINE Alu -14 298 1 27 0 0 0 chr18 40062686 40062713 -46614835 + AT_rich Low_complexity Low_complexity 1 27 0 264 360 33 52 chr18 40063209 40063362 -46614186 + MIR SINE MIR 21 170 -92 2042 146 122 10 chr18 40063523 40063908 -46613640 - MSTA LTR MaLR 0 428 1 210 333 37 0 chr18 40064703 40064784 -46612764 - MIR3 SINE MIR -12 196 113 224 149 21 0 chr18 40064928 40064975 -46612573 + CT-rich Low_complexity Low_complexity 1 48 0 1982 146 7 10 chr18 40064975 40065277 -46612271 - AluSx SINE Alu -11 301 1 729 204 99 5 chr18 40066633 40066834 -46610714 + MLT2C1 LTR ERVL 1 220 -177 347 197 8 26 chr18 40066854 40066971 -46610577 + GA-rich Low_complexity Low_complexity 3 117 0 584 206 9 70 chr18 40066975 40067174 -46610374 + MLT2C1 LTR ERVL 212 663 0 217 284 12 25 chr18 40068459 40068571 -46608977 + CT-rich Low_complexity Low_complexity 1 110 0 1008 158 2 0 chr18 40068586 40068901 -46608647 + CT-rich Low_complexity Low_complexity 2 495 0 22 35 0 0 chr18 40068963 40068992 -46608556 + AT_rich Low_complexity Low_complexity 1 29 0 198 338 142 27 chr18 40069346 40069565 -46607983 - MIR SINE MIR -13 249 6 518 208 104 40 chr18 40070048 40070173 -46607375 + FLAM_A SINE Alu 1 133 0 1974 123 0 7 chr18 40070528 40070836 -46606712 - AluSg SINE Alu 0 306 1 21 0 0 0 chr18 40071665 40071686 -46605862 + AT_rich Low_complexity Low_complexity 1 21 0 291 228 80 18 chr18 40071910 40072010 -46605538 - MIR3 SINE MIR -27 181 72 329 290 92 8 chr18 40072055 40072186 -46605362 + MIR SINE MIR 29 170 -92 194 184 61 0 chr18 40072520 40072569 -46604979 + L2 LINE L2 3262 3313 0 307 295 50 43 chr18 40075219 40075358 -46602190 + MER91C DNA MER1_type 1 140 0 1934 102 4 11 chr18 40075389 40075655 -46601893 + AluSg1 SINE Alu 34 297 -12 1041 318 128 11 chr18 40076000 40076696 -46600852 + Charlie7 DNA MER1_type 1 777 -1835 25 65 0 0 chr18 40076731 40076777 -46600771 + AT_rich Low_complexity Low_complexity 1 46 0 1408 318 108 20 chr18 40077987 40078525 -46599023 - MER115 DNA AcHobo -2 691 107 235 219 37 61 chr18 40078546 40078628 -46598920 + L2 LINE L2 3187 3266 -6 25 0 0 0 chr18 40079483 40079508 -46598040 + AT_rich Low_complexity Low_complexity 1 25 0 262 344 157 24 chr18 40082274 40082733 -46594815 - L2 LINE L2 -377 2937 2418 216 310 28 28 chr18 40083304 40083375 -46594173 + L3 LINE CR1 1106 1176 -401 327 25 0 0 chr18 40083381 40083421 -46594127 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 398 221 74 34 chr18 40085361 40085450 -46592098 - LTR50 LTR ERVL -8 787 688 2087 111 3 10 chr18 40085450 40085738 -46591810 + AluSx SINE Alu 1 286 -26 398 221 74 34 chr18 40085738 40085797 -46591751 - LTR50 LTR ERVL -107 688 633 407 283 122 17 chr18 40085880 40086060 -46591488 - LTR50 LTR ERVL -172 623 425 185 346 87 19 chr18 40088027 40088131 -46589417 - MIR SINE MIR -93 169 59 1322 241 18 102 chr18 40089873 40089915 -46587633 - MLT2B1 LTR ERVL 0 520 476 396 0 0 0 chr18 40089915 40089959 -46587589 + (TG)n Simple_repeat Simple_repeat 2 45 0 1322 241 18 102 chr18 40089959 40090484 -46587064 - MLT2B1 LTR ERVL -44 476 1 197 81 0 27 chr18 40090558 40090595 -46586953 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 183 175 100 0 chr18 40090814 40090854 -46586694 - L2 LINE L2 -89 3224 3181 287 237 11 0 chr18 40093117 40093210 -46584338 + (TA)n Simple_repeat Simple_repeat 2 95 0 319 217 0 0 chr18 40094717 40094786 -46582762 + L1ME3A LINE L1 6095 6163 -7 186 43 0 0 chr18 40095676 40095699 -46581849 + (TC)n Simple_repeat Simple_repeat 2 24 0 339 176 20 29 chr18 40096414 40096516 -46581032 + (CATATA)n Simple_repeat Simple_repeat 2 102 0 372 317 109 15 chr18 40096860 40097062 -46580486 - MIR SINE MIR -10 252 32 349 365 17 9 chr18 40097329 40097444 -46580104 + MIR SINE MIR 27 142 -66 189 229 157 0 chr18 40097533 40097608 -46579940 - MIR SINE MIR -62 146 69 608 168 9 9 chr18 40097663 40097770 -46579778 - AluJ SINE Alu -15 297 191 931 140 0 7 chr18 40097770 40097913 -46579635 - AluJ SINE Alu -170 142 1 198 0 0 0 chr18 40098188 40098210 -46579338 + (T)n Simple_repeat Simple_repeat 1 22 0 525 269 0 0 chr18 40099353 40099472 -46578076 + MIR SINE MIR 53 171 -91 186 43 0 0 chr18 40099505 40099528 -46578020 + (CA)n Simple_repeat Simple_repeat 2 24 0 595 295 102 31 chr18 40100255 40100675 -46576873 + MARNA DNA Mariner 11 460 -126 323 323 21 0 chr18 40100973 40101069 -46576479 - MER5B DNA MER1_type -80 98 1 419 292 29 57 chr18 40101282 40101491 -46576057 + L2 LINE L2 2489 2691 -623 299 349 99 41 chr18 40101516 40101860 -46575688 + L2 LINE L2 2904 3267 -5 197 297 94 47 chr18 40103054 40103182 -46574366 - L2 LINE L2 -4 3309 3176 199 299 91 61 chr18 40104021 40104218 -46573330 + L3 LINE CR1 342 544 -1033 192 77 0 0 chr18 40105534 40105560 -46571988 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 240 262 177 21 chr18 40106233 40106374 -46571174 - L2 LINE L2 -90 3223 3061 536 187 0 20 chr18 40106507 40106763 -46570785 + CT-rich Low_complexity Low_complexity 1 251 0 471 299 53 62 chr18 40106957 40107261 -46570287 + L1ME LINE L1 1146 1446 -5117 922 264 46 28 chr18 40107383 40107860 -46569688 + L1ME LINE L1 5472 5949 -451 1204 249 24 4 chr18 40107863 40108305 -46569243 + L1ME2 LINE L1 2226 2684 -3698 3864 256 54 9 chr18 40108324 40109637 -46567911 + L1ME2 LINE L1 4085 5456 -926 236 143 18 0 chr18 40109672 40109728 -46567820 + A-rich Low_complexity Low_complexity 4 60 0 628 261 23 0 chr18 40109751 40109927 -46567621 + L1ME2 LINE L1 6202 6381 -19 328 238 0 0 chr18 40109971 40110034 -46567514 + Tigger5 DNA MER2_type 2 64 -2259 309 267 0 0 chr18 40110037 40110097 -46567451 - Tigger5 DNA MER2_type -3 2320 2261 1518 267 103 19 chr18 40110120 40110704 -46566844 + L1MC4 LINE L1 6371 7003 -1039 267 255 52 4 chr18 40110683 40110811 -46566737 + L1MC4a LINE L1 7737 7995 0 * 401 227 102 0 chr18 40111166 40111254 -46566294 - L2 LINE L2 -6 3307 3211 243 0 0 0 chr18 40111884 40111911 -46565637 + (CA)n Simple_repeat Simple_repeat 2 28 0 238 278 0 0 chr18 40112037 40112109 -46565439 + T-rich Low_complexity Low_complexity 1 72 0 745 222 104 17 chr18 40112333 40112563 -46564985 + MIR SINE MIR 13 262 0 288 302 0 12 chr18 40113085 40113171 -46564377 + (CA)n Simple_repeat Simple_repeat 2 86 0 413 326 47 39 chr18 40114769 40115002 -46562546 + MIR SINE MIR 20 254 -8 314 294 55 9 chr18 40117116 40117225 -46560323 - MIR3 SINE MIR -23 185 72 234 62 0 0 chr18 40119199 40119231 -46558317 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 257 254 0 34 chr18 40119236 40119295 -46558253 - L2 LINE L2 -12 3260 3204 986 162 34 0 chr18 40120339 40120518 -46557030 - L1M3 LINE L1 -644 5536 5352 233 264 94 28 chr18 40121703 40121809 -46555739 - MIR SINE MIR -50 212 100 369 348 0 81 chr18 40121813 40122060 -46555488 + MIR SINE MIR 2 228 -34 194 286 51 51 chr18 40124122 40124220 -46553328 + MIR SINE MIR 114 211 -51 1438 207 3 61 chr18 40124965 40125294 -46552254 + AluJb SINE Alu 3 312 0 4503 140 4 3 chr18 40125311 40126026 -46551522 + L1PA16 LINE L1 5442 6157 -9 4235 157 68 67 chr18 40126530 40127598 -46549950 - MER11C LTR ERVK 0 1071 3 21 82 0 0 chr18 40128228 40128277 -46549271 + AT_rich Low_complexity Low_complexity 1 49 0 430 228 84 12 chr18 40128333 40128500 -46549048 + MER33 DNA MER1_type 38 216 -108 351 0 0 0 chr18 40128504 40128543 -46549005 + (TG)n Simple_repeat Simple_repeat 2 40 0 228 125 54 0 chr18 40128543 40128554 -46548994 + (TA)n Simple_repeat Simple_repeat 2 11 -49 1981 152 0 0 chr18 40128554 40128851 -46548697 - AluSx SINE Alu -15 297 1 228 125 54 0 chr18 40128851 40128895 -46548653 + (TA)n Simple_repeat Simple_repeat 11 60 0 180 111 0 0 chr18 40129745 40129772 -46547776 + (CA)n Simple_repeat Simple_repeat 1 27 0 488 233 0 39 chr18 40130348 40130477 -46547071 - MLT1A2 LTR MaLR -250 124 1 229 293 73 12 chr18 40130644 40130726 -46546822 + MIR SINE MIR 63 149 -59 1728 171 13 17 chr18 40130727 40131026 -46546522 - AluJo SINE Alu -14 298 1 778 362 91 17 chr18 40132873 40133679 -46543869 - L2 LINE L2 -5 3308 2365 324 325 83 6 chr18 40133821 40133990 -46543558 + MIR SINE MIR 71 252 -10 459 343 51 72 chr18 40134041 40134376 -46543172 + L1MEd LINE L1 22 349 -5770 275 350 43 28 chr18 40134457 40134711 -46542837 + L1MEd LINE L1 452 709 -5410 183 243 86 0 chr18 40135468 40135538 -46542010 + L2 LINE L2 3169 3244 -69 27 49 0 0 chr18 40135643 40135684 -46541864 + AT_rich Low_complexity Low_complexity 1 41 0 378 0 0 0 chr18 40136676 40136718 -46540830 + (CA)n Simple_repeat Simple_repeat 2 43 0 234 191 0 0 chr18 40137001 40137048 -46540500 + T-rich Low_complexity Low_complexity 1 47 0 260 137 20 0 chr18 40137048 40137099 -46540449 + A-rich Low_complexity Low_complexity 1 52 0 256 235 0 0 chr18 40137102 40137153 -46540395 + MIR3 SINE MIR 150 200 -8 245 319 103 17 chr18 40137762 40137878 -46539670 - L2 LINE L2 -8 3305 3180 195 235 0 0 chr18 40138313 40138364 -46539184 + (TG)n Simple_repeat Simple_repeat 2 52 0 1469 202 3 52 chr18 40138539 40138866 -46538682 + AluJo SINE Alu 1 311 -1 306 283 260 17 chr18 40139494 40139671 -46537877 + MIR SINE MIR 37 256 -6 1145 180 9 0 chr18 40140427 40140655 -46536893 + L1MB7 LINE L1 5745 5974 -204 2807 63 36 25 chr18 40140657 40141141 -46536407 + MLT2A1 LTR ERVL 1 453 0 441 268 12 42 chr18 40141371 40141539 -46536009 + L1MB7 LINE L1 5997 6159 -25 254 337 20 0 chr18 40142146 40142244 -46535304 - L3b LINE CR1 -382 1201 1102 263 284 0 0 chr18 40143072 40143139 -46534409 - L2 LINE L2 0 3313 3247 594 257 188 0 chr18 40144420 40144638 -46532910 + MIR SINE MIR 1 259 -3 233 306 50 56 chr18 40145894 40146074 -46531474 - MIR SINE MIR -3 259 81 24 0 0 0 chr18 40146509 40146533 -46531015 + AT_rich Low_complexity Low_complexity 1 24 0 383 339 21 36 chr18 40146800 40146992 -46530556 - MIR3 SINE MIR -14 194 6 434 164 0 132 chr18 40147082 40147234 -46530314 + MER96B DNA MER1_type? 3 134 -283 180 0 0 0 chr18 40147435 40147455 -46530093 + (T)n Simple_repeat Simple_repeat 1 20 0 2234 230 86 0 chr18 40147496 40148018 -46529530 + MLT1F1 LTR MaLR 1 567 0 274 219 0 0 chr18 40149335 40149408 -46528140 - L1ME2 LINE L1 -6 6158 6086 21 57 0 0 chr18 40149525 40149560 -46527988 + AT_rich Low_complexity Low_complexity 1 35 0 23 68 0 0 chr18 40150393 40150437 -46527111 + AT_rich Low_complexity Low_complexity 1 44 0 373 320 105 7 chr18 40152540 40152693 -46524855 + MIR3 SINE MIR 25 192 -16 194 43 106 0 chr18 40153047 40153094 -46524454 + (TATAA)n Simple_repeat Simple_repeat 5 56 0 183 173 0 0 chr18 40155382 40155434 -46522114 + A-rich Low_complexity Low_complexity 1 52 0 2729 104 31 36 chr18 40155444 40155496 -46522052 + MLT2A1 LTR ERVL 1 52 -392 2320 89 7 0 chr18 40155496 40155800 -46521748 + AluY SINE Alu 1 306 -5 2729 104 31 36 chr18 40155800 40156152 -46521396 + MLT2A1 LTR ERVL 52 405 -39 315 85 0 0 chr18 40156152 40156199 -46521349 + (TA)n Simple_repeat Simple_repeat 2 48 0 2729 104 31 36 chr18 40156199 40156237 -46521311 + MLT2A1 LTR ERVL 405 442 -2 1219 79 1 1 chr18 40156294 40156447 -46521101 - L1PA8A LINE L1 -483 5648 5493 1224 102 0 37 chr18 40156447 40156631 -46520917 + L1PA8A LINE L1 5950 6129 -2 1219 79 1 1 chr18 40156631 40156666 -46520882 - L1PA8A LINE L1 -637 5494 5460 24 32 0 0 chr18 40156666 40156697 -46520851 + AT_rich Low_complexity Low_complexity 1 31 0 5571 29 1 0 chr18 40157380 40158156 -46519392 + L1P1 LINE L1 4692 5468 -687 1101 242 20 0 chr18 40158153 40158446 -46519102 - L1 LINE L1 -3397 2749 2451 * 7096 65 12 11 chr18 40158598 40159635 -46517913 + L1P LINE L1 1094 2131 -4015 583 120 22 0 chr18 40159736 40159828 -46517720 - AluS SINE Alu -218 94 1 2590 124 39 26 chr18 40161032 40161664 -46515884 + LTR8A LTR ERV1 1 727 0 514 168 9 47 chr18 40161876 40161983 -46515565 + LTR9 LTR ERV1 1 103 -509 573 157 17 0 chr18 40162099 40162214 -46515334 + MER41B LTR ERV1 2 118 -517 * 1240 154 23 5 chr18 40162212 40162433 -46515115 + MER41B LTR ERV1 411 635 0 322 167 69 0 chr18 40162433 40162500 -46515048 - MER39 LTR ERV1 -249 458 387 3151 121 31 66 chr18 40162504 40163110 -46514438 + LTR59 LTR ERV1 1 585 -12 337 322 14 20 chr18 40213178 40213324 -46464224 - MIR SINE MIR -1 261 117 208 233 110 27 chr18 40213786 40213859 -46463689 + MIR3 SINE MIR 126 204 -4 373 315 9 9 chr18 40213884 40213992 -46463556 - MIR SINE MIR -62 146 39 33 56 0 0 chr18 40214082 40214136 -46463412 + AT_rich Low_complexity Low_complexity 1 54 0 198 344 123 0 chr18 40214470 40214633 -46462915 + L2 LINE L2 2371 2553 -761 293 260 115 10 chr18 40215861 40215957 -46461591 - Charlie4 DNA MER1_type -31 1930 1825 392 196 7 63 chr18 40216844 40216987 -46460561 + L1M4c LINE L1 1275 1409 -4975 * 704 266 53 11 chr18 40216975 40217238 -46460310 + L1MA9 LINE L1 5999 6272 -40 2204 259 59 43 chr18 40217263 40219326 -46458222 + L1M4c LINE L1 1545 3627 -2755 1591 294 71 16 chr18 40219394 40220257 -46457291 + L1M4c LINE L1 3881 4790 -1592 1991 286 47 22 chr18 40220424 40221240 -46456308 - L1MEc LINE L1 -5525 871 36 2224 72 3 75 chr18 40221453 40221786 -46455762 - AluY SINE Alu 0 311 3 35 0 0 0 chr18 40222308 40222343 -46455205 + AT_rich Low_complexity Low_complexity 1 35 0 1260 222 129 12 chr18 40224315 40224648 -46452900 + MSTD LTR MaLR 25 396 0 275 394 48 43 chr18 40227402 40227801 -46449747 + L2 LINE L2 2856 3256 -16 234 294 82 0 chr18 40228322 40228407 -46449141 + L2 LINE L2 2961 3052 -220 180 387 87 23 chr18 40228931 40229104 -46448444 - MIR3 SINE MIR -9 199 16 2052 124 0 10 chr18 40230950 40231285 -46446263 + AluSx SINE Alu 1 332 0 326 253 131 0 chr18 40231871 40231970 -46445578 - LTR16A LTR ERVL -6 444 333 1922 139 3 17 chr18 40232025 40232327 -46445221 - AluSq SINE Alu -15 298 1 183 188 0 0 chr18 40233086 40233134 -46444414 + (CA)n Simple_repeat Simple_repeat 2 49 0 334 251 115 81 chr18 40233207 40233617 -46443931 - MLT1J1 LTR MaLR 0 450 1 330 26 0 0 chr18 40235809 40235848 -46441700 + (TA)n Simple_repeat Simple_repeat 2 40 0 2189 92 7 0 chr18 40238289 40238570 -46438978 - AluSq SINE Alu -30 283 1 269 195 26 26 chr18 40239209 40239286 -46438262 + (TATATG)n Simple_repeat Simple_repeat 3 79 0 335 169 14 0 chr18 40239498 40239569 -46437979 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 524 305 9 49 chr18 40239788 40240011 -46437537 - MIR SINE MIR -30 232 19 321 309 86 29 chr18 40240627 40240766 -46436782 + MIR3 SINE MIR 31 177 -31 25 0 0 0 chr18 40241377 40241402 -46436146 + AT_rich Low_complexity Low_complexity 1 25 0 415 105 0 0 chr18 40241496 40241553 -46435995 - LTR10C LTR ERV1 -5 586 530 * 3419 43 2 0 chr18 40241552 40241966 -46435582 - LTR10C LTR ERV1 -176 415 1 2144 113 7 0 chr18 40242027 40242327 -46435221 - AluSc SINE Alu -7 302 1 698 268 83 7 chr18 40242460 40242736 -46434812 - MER33 DNA MER1_type 0 324 28 194 174 22 0 chr18 40243071 40243117 -46434431 + (CA)n Simple_repeat Simple_repeat 1 47 0 5265 104 37 24 chr18 40243122 40244226 -46433322 + pTR5 LTR ERV1 743 2020 -418 269 255 39 20 chr18 40244226 40244328 -46433220 + LTR30 LTR ERV1 539 642 -80 1270 99 104 5 chr18 40244331 40244532 -46433016 + pTR5 LTR ERV1 172 392 -2046 189 332 103 11 chr18 40244982 40245085 -46432463 - MIR SINE MIR -78 130 18 371 310 245 0 chr18 40245790 40245990 -46431558 + L3 LINE CR1 406 654 -923 664 206 41 24 chr18 40248484 40248654 -46428894 + MIR SINE MIR 84 256 -6 21 0 0 0 chr18 40249935 40249956 -46427592 + AT_rich Low_complexity Low_complexity 1 21 0 534 124 0 21 chr18 40250216 40250313 -46427235 - L1PA16 LINE L1 -1 6165 6071 447 327 146 28 chr18 40251547 40251801 -46425747 - L2 LINE L2 -32 3281 2998 979 264 103 73 chr18 40251901 40252201 -46425347 - LTR33 LTR ERVL 0 521 198 1013 184 72 132 chr18 40252201 40252588 -46424960 - MLT1A1 LTR MaLR 0 365 2 979 264 103 73 chr18 40252588 40252791 -46424757 - LTR33 LTR ERVL -323 198 3 1309 154 50 5 chr18 40254463 40254683 -46422865 + MER30 DNA MER1_type 1 230 0 23 0 0 0 chr18 40256304 40256327 -46421221 + AT_rich Low_complexity Low_complexity 1 23 0 278 311 14 0 chr18 40257292 40257366 -46420182 + GA-rich Low_complexity Low_complexity 2 76 0 389 266 135 48 chr18 40257933 40258140 -46419408 - MIR SINE MIR 0 262 38 250 303 46 20 chr18 40258927 40259079 -46418469 + L1MCa LINE L1 1074 1229 -5197 9645 169 41 10 chr18 40259079 40263277 -46414271 - L1PBa LINE L1 -1764 5098 621 1094 171 5 0 chr18 40263265 40263458 -46414090 - L1PBa LINE L1 -6663 200 7 * 5745 121 52 10 chr18 40263471 40264365 -46413183 - THE1C-int LTR MaLR -649 931 1 1839 140 40 55 chr18 40264367 40264583 -46412965 - THE1C LTR MaLR -2 373 164 2124 116 10 0 chr18 40264583 40264877 -46412671 + AluSp SINE Alu 1 297 -16 1839 140 40 55 chr18 40264877 40265039 -46412509 - THE1C LTR MaLR -211 164 1 2890 245 71 52 chr18 40265044 40267003 -46410545 + L1MC3 LINE L1 4376 5115 -1031 378 61 0 0 chr18 40267003 40267052 -46410496 + (CA)n Simple_repeat Simple_repeat 2 50 0 2890 245 71 52 chr18 40267052 40267324 -46410224 + L1MC3 LINE L1 5115 5380 -766 417 198 0 0 chr18 40267330 40267426 -46410122 + (TA)n Simple_repeat Simple_repeat 1 96 0 24 32 0 0 chr18 40267463 40267494 -46410054 + AT_rich Low_complexity Low_complexity 1 31 0 254 168 42 21 chr18 40267507 40267602 -46409946 + (TA)n Simple_repeat Simple_repeat 1 97 0 1248 214 45 55 chr18 40267656 40268035 -46409513 + L1MD3 LINE L1 6743 7117 -878 234 276 17 0 chr18 40268061 40268119 -46409429 + MLT1F1 LTR MaLR 60 118 -449 279 186 34 0 chr18 40268119 40268178 -46409370 + L1MD3 LINE L1 7398 7458 -537 1571 199 92 2 chr18 40268185 40268598 -46408950 + L1MD3 LINE L1 7545 7994 -1 505 309 54 71 chr18 40268759 40268951 -46408597 + L1ME3A LINE L1 4338 4532 -1614 1996 145 6 3 chr18 40268951 40269262 -46408286 - AluSx SINE Alu 0 312 1 505 309 54 71 chr18 40269262 40269629 -46407919 + L1ME3A LINE L1 4532 4887 -1259 25 31 0 0 chr18 40270152 40270184 -46407364 + AT_rich Low_complexity Low_complexity 1 32 0 1168 269 117 10 chr18 40270395 40270881 -46406667 + L1ME3A LINE L1 5629 6166 -4 334 267 59 64 chr18 40271199 40271386 -46406162 - MER5A DNA MER1_type -3 186 1 24 0 0 0 chr18 40272262 40272286 -46405262 + AT_rich Low_complexity Low_complexity 1 24 0 294 356 61 65 chr18 40272579 40273054 -46404494 + L2 LINE L2 2804 3276 -37 447 19 0 0 chr18 40273081 40273133 -46404415 + (TA)n Simple_repeat Simple_repeat 1 52 0 558 259 8 0 chr18 40273392 40273523 -46404025 + MER94 DNA DNA 2 133 -1 189 365 94 10 chr18 40274363 40274459 -46403089 - MIR SINE MIR -73 135 32 355 333 9 9 chr18 40275049 40275157 -46402391 - MIR SINE MIR -62 146 39 33 56 0 0 chr18 40275247 40275301 -46402247 + AT_rich Low_complexity Low_complexity 1 54 0 205 176 0 0 chr18 40275555 40275589 -46401959 + A-rich Low_complexity Low_complexity 5 38 0 24 0 0 0 chr18 40277431 40277455 -46400093 + AT_rich Low_complexity Low_complexity 1 24 0 570 319 98 25 chr18 40277455 40277862 -46399686 - MLT1L LTR MaLR 0 615 179 372 43 0 0 chr18 40277991 40278037 -46399511 + (TAA)n Simple_repeat Simple_repeat 3 48 0 320 297 153 45 chr18 40278037 40278239 -46399309 - MIR SINE MIR -8 254 31 21 0 0 0 chr18 40279929 40279950 -46397598 + AT_rich Low_complexity Low_complexity 1 21 0 2517 246 59 27 chr18 40280147 40281486 -46396062 + L1ME1 LINE L1 4789 6161 -5 234 286 31 118 chr18 40281522 40281604 -46395944 - MIR SINE MIR -50 212 149 2033 110 7 32 chr18 40281604 40281914 -46395634 - AluSx SINE Alu -10 302 1 234 286 31 118 chr18 40281914 40281992 -46395556 - MIR SINE MIR -113 149 66 861 205 87 2 chr18 40282926 40283217 -46394331 - MLT1A1 LTR MaLR -3 362 1 482 271 15 23 chr18 40284699 40284832 -46392716 - L2 LINE L2 -1 3312 3181 201 132 0 0 chr18 40285449 40285487 -46392061 + (CA)n Simple_repeat Simple_repeat 1 38 0 334 242 0 0 chr18 40286188 40286254 -46391294 - MIR SINE MIR -93 115 50 286 274 0 0 chr18 40286872 40286934 -46390614 + MIR SINE MIR 66 127 -81 393 363 30 18 chr18 40287726 40287894 -46389654 - MIR SINE MIR -80 182 13 696 302 75 77 chr18 40288452 40289283 -46388265 + HAL1 LINE L1 26 854 -1653 291 256 105 75 chr18 40289437 40289570 -46387978 - L2 LINE L2 0 3313 3177 1033 307 79 31 chr18 40289649 40290268 -46387280 + HAL1 LINE L1 1102 1750 -757 311 331 49 92 chr18 40290567 40290914 -46386634 + L2 LINE L2 2891 3222 -50 277 273 11 34 chr18 40290967 40291055 -46386493 - MIR SINE MIR -131 131 46 198 344 62 31 chr18 40291137 40291233 -46386315 + MIR SINE MIR 33 131 -77 1277 224 30 8 chr18 40291333 40291596 -46385952 - AluJo SINE Alu -43 269 1 2097 96 79 0 chr18 40293790 40294070 -46383478 + AluSq SINE Alu 1 302 -11 329 307 140 9 chr18 40294194 40294413 -46383135 + L1MC/D LINE L1 5283 5525 -691 343 271 21 62 chr18 40295833 40295977 -46381571 + HAL1b LINE L1 514 651 -697 8639 206 16 1 chr18 40296020 40298291 -46379257 + L1PB1 LINE L1 3370 5665 -486 2835 139 4 2 chr18 40298396 40298863 -46378685 + L1PB1 LINE L1 5676 6143 -8 292 248 53 62 chr18 40298941 40299054 -46378494 + HAL1b LINE L1 818 929 -419 244 246 0 16 chr18 40299409 40299470 -46378078 + (TATATG)n Simple_repeat Simple_repeat 4 63 0 759 188 0 29 chr18 40299471 40299609 -46377939 - MER92B LTR ERV1 -502 134 1 203 229 16 0 chr18 40299610 40299671 -46377877 + (TA)n Simple_repeat Simple_repeat 1 62 0 2603 43 0 3 chr18 40301065 40301368 -46376180 - AluY SINE Alu -9 302 1 194 291 0 0 chr18 40301425 40301480 -46376068 - MIR SINE MIR -136 126 72 2238 93 0 23 chr18 40302769 40303079 -46374469 + AluSc SINE Alu 1 303 -6 244 345 53 0 chr18 40303911 40304024 -46373524 - MIR3 SINE MIR -3 205 87 548 119 34 17 chr18 40304781 40304899 -46372649 + CT-rich Low_complexity Low_complexity 1 120 0 293 116 0 0 chr18 40304918 40304961 -46372587 + MADE1 DNA Mariner 38 80 0 280 91 0 23 chr18 40305139 40305183 -46372365 + MADE1 DNA Mariner 38 80 0 637 194 31 19 chr18 40305186 40305346 -46372202 - L1MA8 LINE L1 0 6291 6130 2359 123 16 16 chr18 40305377 40305752 -46371796 - THE1C LTR MaLR 0 375 1 7261 140 19 7 chr18 40305752 40306884 -46370664 - THE1C-int LTR MaLR 0 1580 436 3011 164 14 4 chr18 40306884 40307383 -46370165 - Tigger3b DNA MER2_type -727 504 1 392 281 0 0 chr18 40307388 40307470 -46370078 + Tigger7 DNA MER2_type 2406 2487 0 312 197 0 0 chr18 40307470 40307531 -46370017 - L1M2 LINE L1 -711 5580 5520 * 1902 184 101 9 chr18 40307525 40308109 -46369439 + L1M2 LINE L1 4900 5539 -752 314 123 18 0 chr18 40309983 40310040 -46367508 + CT-rich Low_complexity Low_complexity 1 58 0 183 266 101 58 chr18 40310332 40310471 -46367077 + L2 LINE L2 2630 2774 -540 196 302 73 0 chr18 40311159 40311255 -46366293 - MIR SINE MIR -26 236 134 1011 196 96 4 chr18 40311735 40311975 -46365573 - MER58B DNA MER1_type -1 340 79 4102 232 43 40 chr18 40311982 40313352 -46364196 + L1MB5 LINE L1 3982 5366 -808 1767 205 11 0 chr18 40313352 40313713 -46363835 - MER47A DNA MER2_type -1 365 1 4102 232 43 40 chr18 40313713 40313972 -46363576 + L1MB5 LINE L1 5366 5623 -551 389 174 0 98 chr18 40313975 40314067 -46363481 + MSTD LTR MaLR 1 83 -313 502 260 0 0 chr18 40314067 40314167 -46363381 + FRAM SINE Alu 47 146 -30 270 138 12 50 chr18 40314187 40314267 -46363281 + (TA)n Simple_repeat Simple_repeat 1 77 0 838 256 81 9 chr18 40314376 40314599 -46362949 + MSTD LTR MaLR 156 394 -2 2444 221 9 13 chr18 40314600 40315148 -46362400 + L1MB5 LINE L1 5621 6166 -8 396 350 16 0 chr18 40315180 40315303 -46362245 + MER5B DNA MER1_type 2 126 -52 590 175 4 209 chr18 40315345 40315389 -46362159 + MER5A DNA MER1_type 3 54 -135 2243 182 16 16 chr18 40315389 40315813 -46361735 - MSTB LTR MaLR 0 426 3 8486 201 12 5 chr18 40315815 40317455 -46360093 - MSTB-int LTR MaLR 0 1651 1 1968 199 41 21 chr18 40317455 40317873 -46359675 - MSTB LTR MaLR 0 426 1 590 175 4 209 chr18 40317873 40318058 -46359490 + MER5A DNA MER1_type 53 188 -1 182 256 0 0 chr18 40318133 40318176 -46359372 - MER5A DNA MER1_type -84 105 63 * 259 241 184 11 chr18 40318159 40318246 -46359302 - MER5B DNA MER1_type -76 102 1 204 308 98 56 chr18 40318964 40318995 -46358553 + MER5B DNA MER1_type 1 29 -149 16249 142 17 11 chr18 40318995 40319648 -46357900 + Tigger4(Zombi) DNA MER2_type 1 649 -2082 1764 130 101 0 chr18 40319648 40319925 -46357623 + AluSp SINE Alu 1 305 -8 16249 142 17 11 chr18 40319925 40321988 -46355560 + Tigger4(Zombi) DNA MER2_type 649 2731 0 204 308 98 56 chr18 40321988 40322099 -46355449 + MER5B DNA MER1_type 29 149 -29 291 54 0 0 chr18 40322953 40322990 -46354558 + (TG)n Simple_repeat Simple_repeat 2 38 0 187 232 61 85 chr18 40323020 40323102 -46354446 + L2 LINE L2 2201 2280 -1034 23 68 0 0 chr18 40324600 40324644 -46352904 + AT_rich Low_complexity Low_complexity 1 44 0 215 161 0 16 chr18 40327089 40327151 -46350397 + (TAGA)n Simple_repeat Simple_repeat 4 64 0 38 39 0 0 chr18 40328318 40328370 -46349178 + AT_rich Low_complexity Low_complexity 1 52 0 24 32 0 0 chr18 40329541 40329572 -46347976 + AT_rich Low_complexity Low_complexity 1 31 0 208 265 0 29 chr18 40329909 40330045 -46347503 + CT-rich Low_complexity Low_complexity 1 132 0 831 268 49 0 chr18 40330079 40330284 -46347264 + MER20 DNA MER1_type 1 215 -4 22 35 0 0 chr18 40330978 40331007 -46346541 + AT_rich Low_complexity Low_complexity 1 29 0 444 321 79 14 chr18 40331822 40332037 -46345511 - MIR SINE MIR 0 262 34 3277 163 109 23 chr18 40332404 40333135 -46344413 + LTR25 LTR ERV1 1 794 0 212 189 75 19 chr18 40334683 40334789 -46342759 + (TA)n Simple_repeat Simple_repeat 1 112 0 262 274 51 17 chr18 40335129 40335246 -46342302 - MIR SINE MIR -58 150 30 637 286 6 12 chr18 40335510 40335678 -46341870 + MER76 LTR ERV 463 629 -59 198 269 119 0 chr18 40335877 40335944 -46341604 - L2 LINE L2 -554 2760 2686 214 194 28 0 chr18 40336737 40336809 -46340739 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 331 322 55 35 chr18 40336860 40337062 -46340486 + L1MDa LINE L1 1623 1828 -4712 276 321 143 0 chr18 40337065 40337177 -46340371 - MIR SINE MIR -133 129 2 36 0 0 0 chr18 40337600 40337636 -46339912 + AT_rich Low_complexity Low_complexity 1 36 0 203 377 24 40 chr18 40337653 40337828 -46339720 - MIR SINE MIR -48 214 40 3123 176 45 18 chr18 40338977 40339603 -46337945 - LTR48B LTR ERV1 0 644 2 282 290 10 60 chr18 40339776 40339876 -46337672 + MIR SINE MIR 53 147 -115 2492 230 102 21 chr18 40340081 40340941 -46336607 + MER63C DNA MER1_type 1 930 0 270 0 0 0 chr18 40341696 40341726 -46335822 + (TG)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr18 40341831 40341853 -46335695 + AT_rich Low_complexity Low_complexity 1 22 0 246 268 37 0 chr18 40342170 40342252 -46335296 + MLT1L LTR MaLR 508 592 -23 21 0 0 0 chr18 40342753 40342774 -46334774 + AT_rich Low_complexity Low_complexity 1 21 0 1778 187 40 16 chr18 40342777 40343156 -46334392 - MLT1B LTR MaLR 0 390 3 311 314 112 50 chr18 40344433 40344675 -46332873 + MIR SINE MIR 4 260 -2 22 0 0 0 chr18 40344818 40344840 -46332708 + AT_rich Low_complexity Low_complexity 1 22 0 1858 235 41 73 chr18 40345136 40345864 -46331684 - L1MC5 LINE L1 -592 7369 6665 208 115 16 66 chr18 40345865 40345926 -46331622 + (TA)n Simple_repeat Simple_repeat 2 59 0 30 0 0 0 chr18 40345965 40345995 -46331553 + AT_rich Low_complexity Low_complexity 1 30 0 427 356 112 31 chr18 40346272 40346690 -46330858 - HAL1b LINE L1 -614 734 283 24 53 0 0 chr18 40346738 40346776 -46330772 + AT_rich Low_complexity Low_complexity 1 38 0 689 232 114 41 chr18 40346961 40347262 -46330286 - L1ME1 LINE L1 -21 6145 5834 3094 275 50 37 chr18 40347285 40348423 -46329125 - L1MDb LINE L1 -1893 4513 3392 197 33 33 0 chr18 40348423 40348453 -46329095 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2260 75 0 0 chr18 40348456 40348737 -46328811 - AluY SINE Alu -28 283 3 3094 275 50 37 chr18 40348737 40349478 -46328070 - L1MDb LINE L1 -3015 3391 2578 672 284 58 25 chr18 40349538 40349971 -46327577 - L1MDb LINE L1 -5069 1340 894 647 236 58 5 chr18 40350065 40350256 -46327292 + L1MC3 LINE L1 1795 1995 -4431 1092 79 0 0 chr18 40350266 40350405 -46327143 + AluY SINE Alu 143 281 -30 339 260 31 8 chr18 40350458 40350585 -46326963 + L1MC3 LINE L1 2058 2187 -4239 1464 201 4 18 chr18 40350597 40350871 -46326677 + AluJo SINE Alu 4 273 -39 180 152 0 0 chr18 40350875 40350908 -46326640 + CT-rich Low_complexity Low_complexity 1 33 0 238 214 0 48 chr18 40350908 40350992 -46326556 + L1MC4 LINE L1 6608 6687 -1355 * 541 241 149 0 chr18 40350988 40351237 -46326311 + L1MC3 LINE L1 2190 2475 -3951 7971 221 69 15 chr18 40351362 40353385 -46324163 + L1MC3 LINE L1 5727 7859 -206 581 200 21 14 chr18 40353430 40353570 -46323978 + L1 LINE L1 4984 5124 -1022 226 186 0 17 chr18 40353572 40353631 -46323917 + L1MC3 LINE L1 7993 8050 -15 3127 75 42 5 chr18 40355247 40355675 -46321873 - MLT2A1 LTR ERVL 0 444 1 232 365 57 25 chr18 40355730 40355889 -46321659 + L2 LINE L2 2903 3066 -206 259 136 15 76 chr18 40356033 40356099 -46321449 - L1MA10 LINE L1 -14 6320 6259 285 207 0 0 chr18 40356193 40356251 -46321297 - L1MA9 LINE L1 -1 6311 6254 227 326 23 0 chr18 40356773 40356859 -46320689 + (CATA)n Simple_repeat Simple_repeat 4 91 0 575 292 56 16 chr18 40357709 40358031 -46319517 + L1MCa LINE L1 3209 3543 -2883 4487 158 13 30 chr18 40358047 40358915 -46318633 - L1PA16 LINE L1 -9 6157 5305 515 161 11 11 chr18 40358932 40359025 -46318523 + THE1B LTR MaLR 272 364 0 4620 174 21 5 chr18 40359047 40359525 -46318023 + L1P4 LINE L1 4318 4787 -1378 2115 154 11 24 chr18 40359525 40359894 -46317654 - THE1B LTR MaLR 0 364 1 4620 174 21 5 chr18 40359894 40360869 -46316679 + L1P4 LINE L1 4787 5791 -374 3625 169 16 70 chr18 40361056 40361875 -46315673 - L1PB3 LINE L1 -2 6152 5378 654 237 86 16 chr18 40412479 40412665 -46264883 + MIR SINE MIR 48 246 -16 290 348 59 21 chr18 40413434 40413621 -46263927 - MIR SINE MIR -56 206 13 1434 199 6 55 chr18 40413775 40413856 -46263692 - AluJo SINE Alu -2 310 227 3882 132 13 16 chr18 40413856 40414470 -46263078 - LTR9 LTR ERV1 0 612 1 1434 199 6 55 chr18 40414470 40414714 -46262834 - AluJo SINE Alu -85 227 1 297 268 99 28 chr18 40414853 40414995 -46262553 + MER104 DNA Tc2 24 175 -5 1862 171 10 0 chr18 40416894 40417186 -46260362 + AluSx SINE Alu 1 295 -17 273 57 0 0 chr18 40418011 40418046 -46259502 + (TG)n Simple_repeat Simple_repeat 1 35 0 23 0 0 0 chr18 40418072 40418095 -46259453 + AT_rich Low_complexity Low_complexity 1 23 0 1739 108 33 4 chr18 40418405 40418645 -46258903 + AluSx SINE Alu 1 247 -65 204 98 66 49 chr18 40418881 40418942 -46258606 + (TTTA)n Simple_repeat Simple_repeat 2 63 0 405 0 0 0 chr18 40419262 40419307 -46258241 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 203 194 0 0 chr18 40419747 40419783 -46257765 + T-rich Low_complexity Low_complexity 1 36 0 2069 119 3 3 chr18 40421991 40422284 -46255264 + AluSq SINE Alu 1 293 -20 704 116 14 94 chr18 40422393 40422531 -46255017 + Tigger2a DNA MER2_type 2 128 -306 670 220 0 7 chr18 40422532 40422682 -46254866 - L1PBa LINE L1 -5145 1718 1570 7349 183 72 10 chr18 40422812 40424279 -46253269 - L1PBa LINE L1 -5303 1560 3 391 240 183 34 chr18 40424282 40424490 -46253058 - L1MCb LINE L1 -4063 2501 2263 388 280 15 0 chr18 40424500 40424632 -46252916 - L1PBa LINE L1 -6278 585 452 1649 256 113 84 chr18 40424705 40425188 -46252360 - L1MCb LINE L1 -4425 2139 1672 312 48 0 0 chr18 40425188 40425230 -46252318 + (TG)n Simple_repeat Simple_repeat 2 43 0 1649 256 113 84 chr18 40425230 40425659 -46251889 - L1MCb LINE L1 -4892 1672 1257 315 0 0 0 chr18 40425659 40425694 -46251854 + (TG)n Simple_repeat Simple_repeat 2 36 0 1649 256 113 84 chr18 40425694 40426316 -46251232 - L1MCb LINE L1 -5307 1257 552 749 276 31 102 chr18 40426401 40426952 -46250596 - L1MCb LINE L1 -5478 567 56 237 159 0 0 chr18 40427263 40427307 -46250241 + (TG)n Simple_repeat Simple_repeat 1 44 0 1900 167 0 10 chr18 40427561 40427861 -46249687 - AluSx SINE Alu -15 297 1 260 309 0 9 chr18 40427899 40428009 -46249539 - L1MEc LINE L1 -3939 2457 2349 7136 201 6 19 chr18 40428132 40429691 -46247857 - L1 LINE L1 -1365 5497 3960 1470 104 205 3 chr18 40429695 40429992 -46247556 - L1PBa LINE L1 -3851 3011 2655 308 156 16 0 chr18 40430052 40430116 -46247432 + Tigger3(Golem) DNA MER2_type 266 330 -2699 16842 31 1 0 chr18 40430128 40433839 -46243709 - L1PA3 LINE L1 -3 6152 2440 9513 152 34 69 chr18 40433855 40434253 -46243295 - L1PBa LINE L1 -2972 3890 3480 934 158 7 0 chr18 40434253 40434399 -46243149 - AluSq/x SINE Alu -166 147 1 9513 152 34 69 chr18 40434399 40437099 -46240449 - L1PBa LINE L1 -3382 3480 634 976 199 10 0 chr18 40437099 40437295 -46240253 - L1PBa LINE L1 -6663 200 3 336 307 0 0 chr18 40437353 40437441 -46240107 + MLT1F1 LTR MaLR 42 129 -438 1549 193 120 88 chr18 40437443 40437843 -46239705 + L1MD3 LINE L1 7410 7835 -160 1970 149 0 0 chr18 40437843 40438131 -46239417 - AluJb SINE Alu -24 288 1 1549 193 120 88 chr18 40438131 40438290 -46239258 + L1MD3 LINE L1 7835 7987 -8 21 82 0 0 chr18 40438633 40438682 -46238866 + AT_rich Low_complexity Low_complexity 1 49 0 2196 91 0 13 chr18 40439944 40440242 -46237306 - AluY SINE Alu -15 296 3 306 155 19 155 chr18 40440627 40440730 -46236818 - MER50 LTR ERV1 -645 89 1 793 198 64 6 chr18 40441088 40441245 -46236303 - AluJb SINE Alu -16 296 131 1928 155 40 26 chr18 40441291 40441640 -46235908 - THE1B LTR MaLR -10 354 1 714 180 0 0 chr18 40441640 40441751 -46235797 - FLAM_C SINE Alu -30 113 3 560 250 154 75 chr18 40442275 40442515 -46235033 + MIR SINE MIR 4 262 0 2225 113 0 0 chr18 40442639 40442941 -46234607 - AluSq SINE Alu -11 302 1 1691 176 3 13 chr18 40444468 40444780 -46232768 + AluJb SINE Alu 1 309 -3 26 0 0 0 chr18 40445059 40445085 -46232463 + AT_rich Low_complexity Low_complexity 1 26 0 25 51 0 0 chr18 40446673 40446712 -46230836 + AT_rich Low_complexity Low_complexity 1 39 0 384 334 111 21 chr18 40446723 40447109 -46230439 - HAL1 LINE L1 -38 2469 2049 286 319 52 17 chr18 40447146 40447262 -46230286 - MLT1J2 LTR MaLR -268 182 63 3115 163 51 2 chr18 40447464 40448011 -46229537 - Tigger1 DNA MER2_type -1 2417 1844 468 157 0 0 chr18 40448013 40448083 -46229465 - 7SK RNA RNA 0 193 124 259 338 0 0 chr18 40450546 40450620 -46226928 + GA-rich Low_complexity Low_complexity 4 77 0 258 337 10 20 chr18 40451332 40451433 -46226115 + MER5A DNA MER1_type 87 186 -3 891 161 12 0 chr18 40451727 40451888 -46225660 - L1MA10 LINE L1 -1 6333 6171 225 0 0 0 chr18 40451896 40451921 -46225627 + (TTG)n Simple_repeat Simple_repeat 3 27 0 238 26 51 0 chr18 40452300 40452339 -46225209 + (TCTA)n Simple_repeat Simple_repeat 1 41 0 197 33 33 0 chr18 40452340 40452370 -46225178 + (TG)n Simple_repeat Simple_repeat 2 32 0 1417 344 97 26 chr18 40452382 40453286 -46224262 + L2 LINE L2 1912 2879 -435 295 323 73 0 chr18 40453561 40453657 -46223891 + L2 LINE L2 3205 3307 -6 21 36 0 0 chr18 40453844 40453872 -46223676 + AT_rich Low_complexity Low_complexity 1 28 0 1965 121 58 28 chr18 40454251 40454615 -46222933 - THE1C LTR MaLR 0 375 1 2254 74 7 17 chr18 40454821 40455117 -46222431 + AluSq SINE Alu 1 293 -20 22 56 0 0 chr18 40455824 40455860 -46221688 + AT_rich Low_complexity Low_complexity 1 36 0 265 253 23 35 chr18 40455900 40455987 -46221561 + MIR SINE MIR 90 175 -87 29 0 0 0 chr18 40456476 40456505 -46221043 + AT_rich Low_complexity Low_complexity 1 29 0 370 284 62 59 chr18 40457135 40457459 -46220089 - L1MEd LINE L1 -4906 1213 889 1084 291 86 38 chr18 40457621 40457934 -46219614 + L1MD2 LINE L1 4386 4683 -1832 678 251 131 65 chr18 40457934 40458408 -46219140 - MLT1D LTR MaLR 0 505 1 1084 291 86 38 chr18 40458408 40459365 -46218183 + L1MD2 LINE L1 4683 5718 -797 294 194 0 0 chr18 40459447 40459514 -46218034 + (TATG)n Simple_repeat Simple_repeat 2 68 0 3870 266 44 9 chr18 40459575 40460740 -46216808 + L1MC4a LINE L1 6604 7808 0 223 365 126 13 chr18 40461216 40461375 -46216173 + MIR3 SINE MIR 30 206 -2 2237 70 18 0 chr18 40461471 40461757 -46215791 - AluSq SINE Alu -22 291 1 668 246 90 24 chr18 40461813 40462024 -46215524 + MIR SINE MIR 5 229 -33 32 0 0 0 chr18 40463145 40463177 -46214371 + AT_rich Low_complexity Low_complexity 1 32 0 2377 57 3 0 chr18 40463180 40463477 -46214071 - AluY SINE Alu -13 298 1 180 176 0 0 chr18 40463734 40463768 -46213780 + (CA)n Simple_repeat Simple_repeat 2 35 0 1221 274 43 75 chr18 40464361 40465603 -46211945 + L1MCb LINE L1 929 2375 -4370 303 221 106 10 chr18 40465615 40465719 -46211829 + L1MCb LINE L1 2382 2495 -4069 2163 110 3 0 chr18 40465731 40466023 -46211525 + AluSg SINE Alu 1 293 -17 618 259 153 17 chr18 40466029 40466333 -46211215 + L1MD2 LINE L1 5842 6137 -222 1718 137 109 6 chr18 40466803 40467116 -46210432 + MSTA LTR MaLR 1 345 -83 599 250 17 17 chr18 40467128 40467300 -46210248 + L1ME1 LINE L1 5990 6161 -5 230 324 0 0 chr18 40467310 40467378 -46210170 + L1ME3A LINE L1 5797 5864 -298 312 355 70 10 chr18 40467421 40467621 -46209927 + L1ME3A LINE L1 5940 6151 -19 1684 263 84 54 chr18 40467681 40468558 -46208990 + L1MC3 LINE L1 6189 7092 -693 657 242 94 16 chr18 40468580 40468850 -46208698 + L1MC4a LINE L1 7000 7220 -588 5685 148 20 15 chr18 40468866 40469220 -46208328 - L1PB1 LINE L1 -3 6148 5797 426 20 0 0 chr18 40469220 40469271 -46208277 + (TG)n Simple_repeat Simple_repeat 2 52 0 5685 148 20 15 chr18 40469271 40470235 -46207313 - L1PB1 LINE L1 -354 5797 4829 495 283 78 67 chr18 40471965 40472386 -46205162 + MSTC LTR MaLR 3 428 0 3649 277 84 36 chr18 40472409 40472790 -46204758 + L1MEc LINE L1 95 456 -5759 2213 71 57 0 chr18 40472790 40473072 -46204476 + AluSp SINE Alu 9 306 -7 3649 277 84 36 chr18 40473072 40474166 -46203382 + L1MEc LINE L1 456 1496 -4719 503 15 0 0 chr18 40474166 40474231 -46203317 - L1PA2 LINE L1 0 6155 6091 3649 277 84 36 chr18 40474231 40475598 -46201950 + L1MEc LINE L1 1496 3041 -3174 744 306 45 43 chr18 40475607 40476113 -46201435 + L1M4 LINE L1 2392 2898 -3248 2270 267 106 28 chr18 40476271 40477383 -46200165 - L1MC3 LINE L1 -765 6176 5870 2187 128 0 0 chr18 40477383 40477689 -46199859 + AluSq SINE Alu 1 306 -7 2270 267 106 28 chr18 40477689 40477773 -46199775 - L1MC3 LINE L1 -1071 5870 5794 1319 281 100 53 chr18 40477825 40480174 -46197374 - L1MC3 LINE L1 -3231 3710 1071 254 286 12 48 chr18 40480815 40480899 -46196649 - MIR SINE MIR -108 154 74 371 154 78 15 chr18 40481762 40482238 -46195310 + (TA)n Simple_repeat Simple_repeat 1 506 0 241 271 35 0 chr18 40482251 40482336 -46195212 + (CATATA)n Simple_repeat Simple_repeat 2 89 0 9651 134 44 13 chr18 40482633 40484409 -46193139 - Tigger1 DNA MER2_type -564 1854 30 25 0 0 0 chr18 40484462 40484487 -46193061 + AT_rich Low_complexity Low_complexity 1 25 0 1819 94 0 0 chr18 40487202 40487447 -46190101 - L1PA7 LINE L1 -8 6146 5902 24 0 0 0 chr18 40489576 40489600 -46187948 + AT_rich Low_complexity Low_complexity 1 24 0 754 320 21 17 chr18 40490376 40490610 -46186938 + MIR SINE MIR 1 235 -27 646 310 4 39 chr18 40494611 40494840 -46182708 - MIR SINE MIR -8 254 34 310 285 164 12 chr18 40495402 40495567 -46181981 - MIR SINE MIR -10 252 63 1309 227 0 38 chr18 40495872 40496163 -46181385 - AluJo SINE Alu -30 282 3 395 299 34 43 chr18 40497082 40497289 -46180259 - MIR SINE MIR -26 236 32 328 384 47 14 chr18 40497356 40497567 -46179981 - L3 LINE CR1 -345 1232 1015 4211 114 53 3 chr18 40498253 40498875 -46178673 - MER39B LTR ERV1 0 653 1 3329 131 85 5 chr18 40499118 40499706 -46177842 + LTR24C LTR ERV1 1 635 0 597 176 29 0 chr18 40500179 40500281 -46177267 + U6 snRNA snRNA 1 105 -2 1758 202 24 5 chr18 40500281 40500653 -46176895 + L1MB3 LINE L1 5794 6172 -11 330 229 145 34 chr18 40500830 40501009 -46176539 + MLT1I LTR MaLR 15 213 -196 437 278 124 63 chr18 40501110 40501608 -46175940 - HAL1 LINE L1 -1089 1418 812 199 208 0 39 chr18 40505188 40505265 -46172283 + GA-rich Low_complexity Low_complexity 2 75 0 22 0 0 0 chr18 40505539 40505561 -46171987 + AT_rich Low_complexity Low_complexity 1 22 0 348 64 0 0 chr18 40506091 40506138 -46171410 + (TG)n Simple_repeat Simple_repeat 1 47 0 252 0 0 0 chr18 40506137 40506165 -46171383 + (GA)n Simple_repeat Simple_repeat 1 28 0 * 2549 41 0 16 chr18 40508520 40508835 -46168713 + AluY SINE Alu 1 310 -1 1656 135 15 0 chr18 40509015 40509282 -46168266 - L1PA16 LINE L1 -419 5747 5477 2099 156 5 54 chr18 40509282 40509691 -46167857 + L1PA16 LINE L1 5768 6157 -9 190 217 0 101 chr18 40510299 40510368 -46167180 - L2 LINE L2 -1 3271 3210 2206 100 3 20 chr18 40510383 40510684 -46166864 - AluSp SINE Alu -17 296 1 27 0 0 0 chr18 40510791 40510818 -46166730 + AT_rich Low_complexity Low_complexity 1 27 0 200 217 0 0 chr18 40511115 40511161 -46166387 + T-rich Low_complexity Low_complexity 1 46 0 1496 193 26 3 chr18 40511608 40511913 -46165635 - L1MC2 LINE L1 -13 6331 6020 292 339 24 32 chr18 40512576 40512700 -46164848 + L2 LINE L2 3127 3249 -23 223 469 27 0 chr18 40513257 40513404 -46164144 + L2 LINE L2 3085 3235 -37 2051 148 24 24 chr18 40517300 40517673 -46159875 + THE1C LTR MaLR 1 373 -2 326 339 8 24 chr18 40518041 40518165 -46159383 + MIR3 SINE MIR 85 206 -2 25 65 0 0 chr18 40518703 40518749 -46158799 + AT_rich Low_complexity Low_complexity 1 46 0 290 250 60 0 chr18 40521278 40521378 -46156170 + L1ME4a LINE L1 5795 5900 -221 642 189 16 0 chr18 40521612 40521734 -46155814 - LTR33 LTR ERVL -1 520 397 760 324 42 8 chr18 40521791 40522053 -46155495 - LTR33 LTR ERVL -250 271 1 222 37 0 0 chr18 40522555 40522582 -46154966 + (A)n Simple_repeat Simple_repeat 1 27 0 339 324 50 14 chr18 40523119 40523258 -46154290 + L2 LINE L2 2173 2316 -998 184 316 0 0 chr18 40523392 40523449 -46154099 + L2 LINE L2 3257 3313 0 1709 188 64 19 chr18 40524567 40524940 -46152608 + MLT1B LTR MaLR 1 390 0 2357 111 125 125 chr18 40524967 40525631 -46151917 - MER4A LTR ERV1 0 664 1 4034 146 41 3 chr18 40525679 40526364 -46151184 + MER50 LTR ERV1 1 711 -23 351 309 133 24 chr18 40526366 40526823 -46150725 - L1MC/D LINE L1 -2037 5771 5265 2171 117 0 0 chr18 40527157 40527439 -46150109 + AluSc SINE Alu 1 282 -27 274 256 0 0 chr18 40527470 40527560 -46149988 + L1MC4 LINE L1 6614 6703 -1339 384 311 52 56 chr18 40527595 40527900 -46149648 - L1MC/D LINE L1 -3198 2948 2645 345 310 98 41 chr18 40527985 40528436 -46149112 - L1MC/D LINE L1 -3526 2620 2147 1221 218 71 20 chr18 40529441 40529832 -46147716 - MER66A LTR ERV1 -23 525 97 1933 191 14 3 chr18 40529869 40530220 -46147328 - MER66A-int LTR ERV1 0 6676 6322 1288 234 127 5 chr18 40530284 40530668 -46146880 - MER66-int LTR ERV1 -1609 6147 4609 359 279 23 0 chr18 40530668 40530754 -46146794 - MER4D LTR ERV1 -712 160 73 913 179 0 112 chr18 40530754 40531005 -46146543 - MER66-int LTR ERV1 -2243 4433 4211 2002 116 3 14 chr18 40531604 40531896 -46145652 - AluSx SINE Alu -5 307 19 266 333 126 0 chr18 40532286 40532421 -46145127 - MIR SINE MIR -34 228 77 310 297 55 101 chr18 40532470 40532660 -46144888 - MIR SINE MIR -66 142 3 184 217 109 54 chr18 40534510 40534602 -46142946 + MIR SINE MIR 165 261 -1 23 0 0 0 chr18 40534891 40534914 -46142634 + AT_rich Low_complexity Low_complexity 1 23 0 224 231 0 0 chr18 40534947 40534999 -46142549 + (TATG)n Simple_repeat Simple_repeat 4 55 0 25 31 0 0 chr18 40535111 40535143 -46142405 + AT_rich Low_complexity Low_complexity 1 32 0 1243 106 3 13 chr18 40535204 40535513 -46142035 + (GAAA)n Simple_repeat Simple_repeat 4 307 0 186 191 0 0 chr18 40535736 40535778 -46141770 + (CA)n Simple_repeat Simple_repeat 1 42 0 200 233 26 9 chr18 40535780 40535896 -46141652 + (TA)n Simple_repeat Simple_repeat 1 118 0 893 230 88 79 chr18 40535925 40536347 -46141201 - MLT2B1 LTR ERVL -34 486 5 10733 183 31 10 chr18 40536350 40538307 -46139241 - ERVL-B1 LTR ERVL -9 5755 3759 186 261 174 11 chr18 40540057 40540149 -46137399 + MIR SINE MIR 120 226 -36 792 262 16 0 chr18 40541663 40541846 -46135702 - MER5A DNA MER1_type -3 186 1 2388 82 0 0 chr18 40542753 40543057 -46134491 + AluY SINE Alu 1 304 -7 23 0 0 0 chr18 40544231 40544254 -46133294 + AT_rich Low_complexity Low_complexity 1 23 0 229 339 79 17 chr18 40544746 40544923 -46132625 - MIR3 SINE MIR 0 208 21 21 0 0 0 chr18 40545192 40545213 -46132335 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr18 40548213 40548237 -46129311 + AT_rich Low_complexity Low_complexity 1 24 0 2407 48 0 0 chr18 40548237 40548526 -46129022 - AluY SINE Alu -10 301 13 2769 191 83 45 chr18 40549048 40549226 -46128322 - MER66B-int LTR ERV1 -2632 4044 3874 2358 148 3 8 chr18 40549226 40549603 -46127945 - THE1C LTR MaLR 0 375 1 2769 191 83 45 chr18 40549603 40550308 -46127240 - MER66B-int LTR ERV1 -2802 3874 1204 2517 153 21 5 chr18 40550310 40550747 -46126801 - MER66B-int LTR ERV1 -222 1564 1121 455 326 42 36 chr18 40550759 40550952 -46126596 - MER66B-int LTR ERV1 -3576 3100 2907 1499 281 68 5 chr18 40550968 40551406 -46126142 - MER66B-int LTR ERV1 -6160 516 51 1242 215 47 22 chr18 40551414 40551744 -46125804 - MER66B LTR ERV1 0 523 195 384 324 48 20 chr18 40551871 40552121 -46125427 + HAL1b LINE L1 329 585 -763 415 328 53 57 chr18 40552978 40553508 -46124040 + L1M4 LINE L1 2485 3012 -3134 21 71 0 0 chr18 40553543 40553585 -46123963 + AT_rich Low_complexity Low_complexity 1 42 0 244 273 13 39 chr18 40553609 40553686 -46123862 - MER5B DNA MER1_type -20 158 84 3971 170 42 14 chr18 40553733 40555209 -46122339 + L1MA4 LINE L1 4532 6057 -243 2397 193 2 39 chr18 40555209 40555414 -46122134 + LTR27 LTR ERV1 2 213 -423 2367 81 0 7 chr18 40555414 40555721 -46121827 - AluY SINE Alu -6 305 1 2397 193 2 39 chr18 40555721 40556032 -46121516 + LTR27 LTR ERV1 213 499 -137 620 184 14 41 chr18 40556094 40556241 -46121307 + LTR27 LTR ERV1 494 636 0 358 208 0 0 chr18 40556243 40556315 -46121233 + L1MA4 LINE L1 6054 6125 -175 33 43 0 0 chr18 40556319 40556366 -46121182 + AT_rich Low_complexity Low_complexity 1 47 0 231 253 67 108 chr18 40556527 40556887 -46120661 + L1ME4a LINE L1 5737 6081 -40 201 293 93 0 chr18 40557160 40557235 -46120313 + MIR SINE MIR 72 153 -109 516 231 0 31 chr18 40558070 40558200 -46119348 - FRAM SINE Alu -3 173 48 252 0 0 0 chr18 40558298 40558326 -46119222 + (T)n Simple_repeat Simple_repeat 1 28 0 545 224 9 9 chr18 40558784 40558900 -46118648 - L1PA16 LINE L1 -26 6140 6025 1161 224 32 58 chr18 40559261 40559592 -46117956 - MER21B LTR ERV1 -69 794 473 2075 117 3 46 chr18 40559592 40559918 -46117630 + AluSx SINE Alu 1 312 0 1161 224 32 58 chr18 40559918 40559958 -46117590 - MER21B LTR ERV1 -390 473 433 2041 182 3 26 chr18 40559958 40560337 -46117211 - MER66B LTR ERV1 0 486 117 21 0 0 0 chr18 40561347 40561368 -46116180 + AT_rich Low_complexity Low_complexity 1 21 0 3297 126 8 0 chr18 40561689 40562180 -46115368 - LOR1a LTR ERV1 -2 495 1 612 195 97 39 chr18 40562586 40562740 -46114808 - FRAM SINE Alu 0 166 4 252 0 0 0 chr18 40562808 40562836 -46114712 + (T)n Simple_repeat Simple_repeat 1 28 0 1050 251 13 95 chr18 40563265 40563643 -46113905 - MER21B LTR ERV1 -516 347 1 26 0 0 0 chr18 40567743 40567769 -46109779 + AT_rich Low_complexity Low_complexity 1 26 0 321 257 70 88 chr18 40568163 40568334 -46109214 - L2 LINE L2 -118 3195 3028 249 33 0 0 chr18 40569743 40569773 -46107775 + (TG)n Simple_repeat Simple_repeat 2 31 0 21 0 0 0 chr18 40570387 40570408 -46107140 + AT_rich Low_complexity Low_complexity 1 21 0 839 238 56 23 chr18 40571060 40571274 -46106274 + MER58A DNA MER1_type 1 221 -3 477 371 37 15 chr18 40571379 40571705 -46105843 - MLT1K LTR MaLR -158 430 98 1122 165 76 120 chr18 40572277 40572659 -46104889 + MLT1A1 LTR MaLR 1 365 0 26 50 0 0 chr18 40573152 40573192 -46104356 + AT_rich Low_complexity Low_complexity 1 40 0 192 125 0 0 chr18 40573411 40573443 -46104105 + (TA)n Simple_repeat Simple_repeat 1 32 0 297 211 66 0 chr18 40573470 40573636 -46103912 + (TA)n Simple_repeat Simple_repeat 2 178 0 186 97 0 0 chr18 40573636 40573646 -46103902 + (CA)n Simple_repeat Simple_repeat 2 11 -21 2249 143 34 14 chr18 40573646 40574003 -46103545 + THE1B LTR MaLR 1 364 0 186 97 0 0 chr18 40574003 40574023 -46103525 + (CA)n Simple_repeat Simple_repeat 10 32 0 526 264 86 70 chr18 40574248 40574676 -46102872 + L1ME2 LINE L1 43 477 -5919 1210 259 117 21 chr18 40574906 40575192 -46102356 + L1ME2 LINE L1 2595 2852 -3363 1860 164 38 16 chr18 40575192 40575559 -46101989 - THE1C LTR MaLR 0 375 1 1210 259 117 21 chr18 40575559 40576024 -46101524 + L1ME2 LINE L1 2852 3418 -2797 1001 250 83 83 chr18 40576099 40577164 -46100384 + L1ME2 LINE L1 4927 5981 -252 2226 105 3 3 chr18 40577164 40577469 -46100079 + AluSp SINE Alu 1 305 -8 1001 250 83 83 chr18 40577469 40577690 -46099858 + L1ME2 LINE L1 5981 6201 -32 207 245 19 0 chr18 40577710 40577763 -46099785 + (TAAA)n Simple_repeat Simple_repeat 3 56 0 254 348 35 26 chr18 40577820 40577935 -46099613 + MIR SINE MIR 37 152 -110 2290 79 0 7 chr18 40578099 40578402 -46099146 - AluY SINE Alu -10 301 1 26 0 0 0 chr18 40579147 40579173 -46098375 + AT_rich Low_complexity Low_complexity 1 26 0 480 331 147 16 chr18 40579820 40580270 -46097278 + L1ME4a LINE L1 5353 5861 -260 191 61 30 0 chr18 40580558 40580591 -46096957 + (TC)n Simple_repeat Simple_repeat 2 35 0 28 61 0 0 chr18 40580767 40580816 -46096732 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr18 40580836 40580857 -46096691 + AT_rich Low_complexity Low_complexity 1 21 0 630 321 130 17 chr18 40581543 40582020 -46095528 + L2 LINE L2 2340 2870 -444 437 239 83 9 chr18 40632607 40632716 -46044832 + MLT1H LTR MaLR 425 541 -8 236 217 29 58 chr18 40632722 40632791 -46044757 + MLT1K LTR MaLR 520 586 -2 201 121 0 0 chr18 40633110 40633143 -46044405 + (CA)n Simple_repeat Simple_repeat 1 33 0 678 293 93 34 chr18 40633679 40634065 -46043483 + MLT1I LTR MaLR 1 409 0 210 37 0 0 chr18 40634462 40634489 -46043059 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 2313 176 171 143 chr18 40634892 40635884 -46041664 - LTR28 LTR ERV1 0 1020 1 2428 101 0 0 chr18 40635962 40636270 -46041278 - AluSq SINE Alu -5 308 1 939 96 16 0 chr18 40636352 40636477 -46041071 + AluSp/q SINE Alu 169 295 -18 4865 109 58 44 chr18 40637138 40638481 -46039067 + pTR5 LTR ERV1 738 2606 0 2158 117 3 13 chr18 40638543 40638852 -46038696 - AluSq SINE Alu -7 306 1 199 320 0 0 chr18 40639069 40639119 -46038429 + L3b LINE CR1 1531 1580 -3 275 296 177 21 chr18 40639236 40639422 -46038126 + MIR SINE MIR 22 236 -26 2525 57 0 0 chr18 40640306 40640603 -46036945 - AluY SINE Alu -14 297 1 24 32 0 0 chr18 40642256 40642287 -46035261 + AT_rich Low_complexity Low_complexity 1 31 0 4125 178 50 43 chr18 40642551 40643857 -46033691 + L1MB1 LINE L1 4826 6165 -3 660 216 19 6 chr18 40643873 40644035 -46033513 - MER3 DNA MER1_type -41 168 5 288 290 107 30 chr18 40645488 40645619 -46031929 + MIR3 SINE MIR 67 207 -1 448 302 63 6 chr18 40645920 40646079 -46031469 - MIR3 SINE MIR -3 205 38 4292 220 63 42 chr18 40647504 40649157 -46028391 + L1MC3 LINE L1 3838 4787 -1359 392 0 21 0 chr18 40649157 40649205 -46028343 + (CA)n Simple_repeat Simple_repeat 2 50 0 4292 220 63 42 chr18 40649205 40649835 -46027713 + L1MC3 LINE L1 4787 5403 -743 256 224 0 17 chr18 40649839 40649897 -46027651 + L1MC3 LINE L1 6875 6931 -854 422 253 55 6 chr18 40649926 40650108 -46027440 + L1MC3 LINE L1 6907 7097 -688 274 286 11 11 chr18 40650108 40650199 -46027349 + MLT1F1 LTR MaLR 35 125 -442 567 226 77 13 chr18 40650200 40650355 -46027193 + L1MC3 LINE L1 7198 7362 -423 3525 278 86 24 chr18 40650370 40652632 -46024916 + L1M4 LINE L1 2890 5308 -838 1497 226 0 4 chr18 40652636 40652915 -46024633 + AluJo SINE Alu 3 280 -32 645 14 0 0 chr18 40652919 40652993 -46024555 + (TAAAA)n Simple_repeat Simple_repeat 2 75 0 11324 218 40 37 chr18 40653053 40656204 -46021344 + L1M2c LINE L1 15 3155 -4053 14669 25 0 0 chr18 40656204 40658705 -46018843 + L1PA3 LINE L1 3653 6155 0 11324 218 40 37 chr18 40658705 40658727 -46018821 + L1M2c LINE L1 3155 3175 -4033 1752 158 3 28 chr18 40658727 40659012 -46018536 + AluSx SINE Alu 21 298 -14 11324 218 40 37 chr18 40659012 40661231 -46016317 + L1M2c LINE L1 3175 5483 -1725 1156 82 0 0 chr18 40661332 40661479 -46016069 + AluSg/x SINE Alu 161 307 -5 219 88 0 0 chr18 40662164 40662198 -46015350 + (TAA)n Simple_repeat Simple_repeat 1 34 0 373 320 40 13 chr18 40663405 40663555 -46013993 - MIR3 SINE MIR -23 185 32 1296 158 0 0 chr18 40665702 40665904 -46011644 + AluSg/x SINE Alu 109 310 -2 203 200 0 0 chr18 40666326 40666361 -46011187 + A-rich Low_complexity Low_complexity 1 35 0 2216 120 3 0 chr18 40666703 40667004 -46010544 + AluSx SINE Alu 1 302 -10 1176 234 10 60 chr18 40667032 40667416 -46010132 + MLT1A1 LTR MaLR 1 365 0 728 311 41 41 chr18 40668183 40668521 -46009027 - L2 LINE L2 -1361 1953 1616 351 287 0 26 chr18 40669068 40669183 -46008365 + GA-rich Low_complexity Low_complexity 4 115 0 293 182 0 0 chr18 40670643 40670698 -46006850 - MER53 DNA DNA 0 189 135 237 211 0 0 chr18 40670701 40670758 -46006790 + (TA)n Simple_repeat Simple_repeat 1 57 0 469 235 25 0 chr18 40670758 40670877 -46006671 - MER53 DNA DNA -67 122 1 26 30 0 0 chr18 40672121 40672154 -46005394 + AT_rich Low_complexity Low_complexity 1 33 0 284 171 9 48 chr18 40672434 40672539 -46005009 + GA-rich Low_complexity Low_complexity 3 103 0 4438 136 7 50 chr18 40674529 40674673 -46002875 + MER72 LTR ERV1 1 150 -572 243 0 0 0 chr18 40674673 40674700 -46002848 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1576 184 22 0 chr18 40674705 40674977 -46002571 - AluJb SINE Alu -34 278 1 4438 136 7 50 chr18 40674977 40675581 -46001967 + MER72 LTR ERV1 154 722 0 30 83 0 0 chr18 40675986 40676058 -46001490 + AT_rich Low_complexity Low_complexity 1 72 0 219 297 0 0 chr18 40676570 40676634 -46000914 - MIR SINE MIR -55 207 144 697 266 107 64 chr18 40676652 40677218 -46000330 + L2 LINE L2 2716 3313 0 25 0 0 0 chr18 40678298 40678323 -45999225 + AT_rich Low_complexity Low_complexity 1 25 0 2305 157 76 11 chr18 40679217 40679650 -45997898 + LOR1b LTR ERV1 1 461 0 2358 103 0 0 chr18 40681475 40681786 -45995762 - AluSq SINE Alu -2 311 1 216 294 73 52 chr18 40681849 40681985 -45995563 - MIR SINE MIR -122 140 2 1684 147 28 25 chr18 40682462 40682748 -45994800 + AluSx SINE Alu 1 287 -25 23 54 0 0 chr18 40682762 40682799 -45994749 + AT_rich Low_complexity Low_complexity 1 37 0 5026 101 41 18 chr18 40683040 40683803 -45993745 - LTR17 LTR ERV1 0 780 1 1354 197 24 61 chr18 40685719 40686014 -45991534 - MER54A LTR ERVL -617 284 1 228 182 23 0 chr18 40686023 40686067 -45991481 - MIR SINE MIR -62 146 102 606 237 13 26 chr18 40686119 40686271 -45991277 + MLT1E1 LTR MaLR 1 150 -504 1601 158 45 11 chr18 40687142 40687407 -45990141 - MER1B DNA MER1_type 0 339 66 229 378 119 10 chr18 40687594 40687795 -45989753 - L3 LINE CR1 -143 1434 1212 439 351 94 25 chr18 40688116 40688509 -45989039 - L3 LINE CR1 -816 761 342 237 127 270 0 chr18 40688641 40688704 -45988844 + MADE1 DNA Mariner 1 80 0 253 208 0 0 chr18 40689862 40689910 -45987638 + MLT1I LTR MaLR 3 50 -359 199 415 24 0 chr18 40690701 40690783 -45986765 - L2 LINE L2 -2 3311 3228 291 278 87 35 chr18 40690944 40691059 -45986489 + L2 LINE L2 3193 3313 0 217 329 118 13 chr18 40691241 40691393 -45986155 - MIR SINE MIR -18 244 77 488 45 15 0 chr18 40691873 40691939 -45985609 - MER41A LTR ERV1 -88 466 400 466 207 85 89 chr18 40691949 40692195 -45985353 - L1ME2 LINE L1 -10 6154 5910 5795 199 53 42 chr18 40692222 40692888 -45984660 + L1MA9 LINE L1 3848 4505 -1807 1948 152 0 3 chr18 40692888 40693198 -45984350 + AluSx SINE Alu 3 311 -1 5795 199 53 42 chr18 40693198 40693972 -45983576 + L1MA9 LINE L1 4505 5269 -1043 239 53 0 26 chr18 40693972 40694010 -45983538 + (TAAA)n Simple_repeat Simple_repeat 3 39 0 5795 199 53 42 chr18 40694010 40694872 -45982676 + L1MA9 LINE L1 5269 6155 -157 241 200 0 0 chr18 40694877 40694922 -45982626 + L1MA9 LINE L1 6227 6271 -41 1761 225 96 25 chr18 40694960 40695085 -45982463 + L1MCa LINE L1 1770 1885 -4541 3413 50 5 0 chr18 40695085 40695525 -45982023 + L1PA4 LINE L1 5710 6151 -4 1761 225 96 25 chr18 40695525 40696488 -45981060 + L1MCa LINE L1 1885 3157 -3269 629 213 0 0 chr18 40696500 40696652 -45980896 + FLAM_C SINE Alu 10 161 0 732 237 65 23 chr18 40696695 40697003 -45980545 + L1MCa LINE L1 3166 3486 -2940 1655 142 27 19 chr18 40697012 40697272 -45980276 + AluSx SINE Alu 6 267 -45 597 256 109 44 chr18 40697274 40697733 -45979815 - L1MEc LINE L1 -3591 2835 2386 8821 181 140 31 chr18 40697734 40698678 -45978870 - L1MCa LINE L1 -3886 2542 1702 206 0 69 0 chr18 40698678 40698707 -45978841 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 8821 181 140 31 chr18 40698707 40699052 -45978496 - L1MCa LINE L1 -4726 1702 1396 225 0 0 0 chr18 40699052 40699077 -45978471 + (TC)n Simple_repeat Simple_repeat 2 26 0 8821 181 140 31 chr18 40699077 40699467 -45978081 - L1MCa LINE L1 -5032 1396 1050 213 39 0 0 chr18 40699467 40699493 -45978055 + (TTG)n Simple_repeat Simple_repeat 2 27 0 8821 181 140 31 chr18 40699493 40699791 -45977757 - L1MCa LINE L1 -5378 1050 786 1791 166 0 3 chr18 40699791 40700092 -45977456 - AluSx SINE Alu -12 300 1 8821 181 140 31 chr18 40700092 40700396 -45977152 - L1MCa LINE L1 -5642 786 5 23 33 0 0 chr18 40700417 40700447 -45977101 + AT_rich Low_complexity Low_complexity 1 30 0 1604 117 0 0 chr18 40700453 40700675 -45976873 + AluSg/x SINE Alu 81 302 -8 1026 289 46 67 chr18 40700682 40702156 -45975392 - L1ME LINE L1 -4267 2558 1057 284 256 85 12 chr18 40702948 40703030 -45974518 - MIR SINE MIR -87 175 88 194 226 107 12 chr18 40703065 40703149 -45974399 + MER5C DNA MER1_type 198 289 -35 1725 173 8 64 chr18 40703301 40703379 -45974169 + MER47A DNA MER2_type 1 82 -2241 2186 89 0 0 chr18 40703379 40703703 -45973845 + AluY SINE Alu 1 324 0 1725 173 8 64 chr18 40703703 40704011 -45973537 + MER47A DNA MER2_type 82 366 0 330 45 0 0 chr18 40705632 40705676 -45971872 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 209 219 24 0 chr18 40705676 40705717 -45971831 - MIR SINE MIR -7 255 214 1080 231 53 129 chr18 40706043 40706533 -45971015 + MER21B LTR ERV1 12 464 -399 2219 94 7 0 chr18 40706657 40706954 -45970594 - AluSg SINE Alu -11 299 1 2106 127 3 0 chr18 40707501 40707801 -45969747 - AluSg SINE Alu -9 301 1 200 35 35 0 chr18 40708965 40708994 -45968554 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 2258 82 3 10 chr18 40709606 40709897 -45967651 - AluSp SINE Alu -20 293 5 289 354 20 40 chr18 40710419 40710617 -45966931 + MIR SINE MIR 19 212 -50 248 349 160 11 chr18 40710614 40710889 -45966659 + L2 LINE L2 2995 3310 -3 * 25 31 0 0 chr18 40711449 40711481 -45966067 + AT_rich Low_complexity Low_complexity 1 32 0 555 214 0 0 chr18 40711495 40711593 -45965955 - FLAM_A SINE Alu -25 117 20 21 89 0 0 chr18 40712179 40712235 -45965313 + AT_rich Low_complexity Low_complexity 1 56 0 1366 299 35 15 chr18 40712456 40712937 -45964611 + L1ME1 LINE L1 37 527 -5869 274 164 0 18 chr18 40712937 40712992 -45964556 + MLT1B LTR MaLR 1 54 -336 1121 237 92 22 chr18 40713025 40713472 -45964076 + L1ME1 LINE L1 4082 4559 -1656 * 26022 144 11 15 chr18 40713470 40715296 -45962252 + L1PA8 LINE L1 10 1841 -4646 2200 81 0 53 chr18 40715296 40715616 -45961932 + AluY SINE Alu 1 303 -8 26022 144 11 15 chr18 40715616 40720220 -45957328 + L1PA8 LINE L1 1841 6485 -2 80 30 0 0 chr18 40720290 40720391 -45957157 + AT_rich Low_complexity Low_complexity 1 101 0 625 209 63 32 chr18 40720397 40720555 -45956993 + FRAM SINE Alu 1 155 -21 3158 236 55 16 chr18 40720637 40722004 -45955544 + L1ME1 LINE L1 4821 6228 -7 24 32 0 0 chr18 40722095 40722126 -45955422 + AT_rich Low_complexity Low_complexity 1 31 0 1901 143 3 23 chr18 40722540 40722847 -45954701 - AluSx SINE Alu -7 305 5 187 338 65 0 chr18 40723878 40723955 -45953593 - L2 LINE L2 -8 3305 3224 1638 26 10 0 chr18 40724628 40724822 -45952726 + L1PA3 LINE L1 5959 6154 -1 22 56 0 0 chr18 40724948 40724984 -45952564 + AT_rich Low_complexity Low_complexity 1 36 0 259 203 25 0 chr18 40724992 40725071 -45952477 + (TATATG)n Simple_repeat Simple_repeat 4 84 0 225 186 34 0 chr18 40725072 40725131 -45952417 - LTR66 LTR ERVL -172 438 378 1673 170 3 42 chr18 40725515 40725821 -45951727 + AluJo SINE Alu 3 296 -16 292 271 93 28 chr18 40725948 40726055 -45951493 - L2 LINE L2 -1 3271 3158 24 0 0 0 chr18 40726224 40726248 -45951300 + AT_rich Low_complexity Low_complexity 1 24 0 290 170 0 0 chr18 40726407 40726454 -45951094 + AluJb SINE Alu 194 240 -62 2057 103 57 0 chr18 40726497 40726779 -45950769 + AluSc SINE Alu 1 298 -11 4924 208 52 42 chr18 40727629 40729069 -45948479 + Charlie1a DNA MER1_type 1 1454 -1 361 357 58 17 chr18 40729108 40729349 -45948199 + MIR SINE MIR 12 262 0 188 74 37 37 chr18 40729349 40729403 -45948145 + (TA)n Simple_repeat Simple_repeat 1 54 0 29 0 0 0 chr18 40729469 40729498 -45948050 + AT_rich Low_complexity Low_complexity 1 29 0 821 348 39 21 chr18 40730488 40731166 -45946382 + L2 LINE L2 2579 3272 0 222 290 0 0 chr18 40731684 40731746 -45945802 + CT-rich Low_complexity Low_complexity 2 63 0 471 176 24 0 chr18 40732878 40733003 -45944545 + (TA)n Simple_repeat Simple_repeat 1 128 0 432 184 0 0 chr18 40733216 40733319 -45944229 + (TA)n Simple_repeat Simple_repeat 1 103 0 364 357 16 0 chr18 40733320 40733449 -45944099 - L2 LINE L2 -1 3312 3182 28 29 0 0 chr18 40734296 40734331 -45943217 + AT_rich Low_complexity Low_complexity 1 35 0 375 157 0 0 chr18 40735259 40735329 -45942219 + GA-rich Low_complexity Low_complexity 1 70 0 587 276 27 32 chr18 40735744 40735929 -45941619 - L2 LINE L2 -3 3310 3127 532 313 30 30 chr18 40736967 40737229 -45940319 - MIR SINE MIR 0 262 1 24 32 0 0 chr18 40737532 40737563 -45939985 + AT_rich Low_complexity Low_complexity 1 31 0 2312 104 0 0 chr18 40737602 40737909 -45939639 - AluSx SINE Alu -5 307 1 989 123 0 0 chr18 40739277 40739415 -45938133 + AluSq/x SINE Alu 1 138 -174 22 35 0 0 chr18 40740260 40740289 -45937259 + AT_rich Low_complexity Low_complexity 1 29 0 977 174 7 7 chr18 40740303 40740492 -45937056 + AluSc SINE Alu 124 312 0 297 316 35 26 chr18 40740494 40740608 -45936940 - MLT1J2 LTR MaLR -34 416 302 251 333 31 16 chr18 40740689 40740818 -45936730 - MLT1I LTR MaLR -268 141 11 238 323 8 62 chr18 40742169 40742299 -45935249 + L2 LINE L2 3182 3304 -9 1813 192 6 6 chr18 40743334 40743678 -45933870 - MER2 DNA MER2_type 0 344 1 200 375 161 0 chr18 40743856 40743968 -45933580 + L2 LINE L2 3138 3267 -5 189 132 0 0 chr18 40744940 40744978 -45932570 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 232 186 0 0 chr18 40746088 40746131 -45931417 + MER57A LTR ERV1 296 338 -65 25 0 0 0 chr18 40746131 40746156 -45931392 + AT_rich Low_complexity Low_complexity 1 25 0 203 88 29 0 chr18 40746156 40746190 -45931358 + (TAGA)n Simple_repeat Simple_repeat 3 37 0 259 311 58 10 chr18 40746399 40746487 -45931061 - MIR SINE MIR -69 139 44 2218 120 3 0 chr18 40746487 40746788 -45930760 - AluSx SINE Alu -8 304 3 259 311 58 10 chr18 40746788 40746802 -45930746 - MIR SINE MIR -164 44 32 271 232 32 8 chr18 40746867 40746992 -45930556 + GA-rich Low_complexity Low_complexity 6 133 0 481 310 33 28 chr18 40747650 40747863 -45929685 + MIR SINE MIR 49 262 0 409 241 105 8 chr18 40748055 40748188 -45929360 - MLT1J2 LTR MaLR -41 409 264 520 270 56 64 chr18 40748684 40748917 -45928631 - MIR SINE MIR -29 233 3 419 319 104 31 chr18 40749096 40749356 -45928192 - L3 LINE CR1 -351 1226 948 243 242 0 0 chr18 40750079 40750141 -45927407 + (TATG)n Simple_repeat Simple_repeat 3 64 0 843 206 0 0 chr18 40750143 40750506 -45927042 + (TG)n Simple_repeat Simple_repeat 1 363 0 700 206 17 0 chr18 40750536 40750711 -45926837 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 237 30 30 0 chr18 40750728 40750761 -45926787 + (TA)n Simple_repeat Simple_repeat 2 35 0 204 216 0 0 chr18 40751203 40751254 -45926294 + (CATATA)n Simple_repeat Simple_repeat 3 53 0 2504 193 45 25 chr18 40751333 40751842 -45925706 - MLT2B3 LTR ERVL -35 519 1 282 29 0 0 chr18 40752379 40752414 -45925134 + (TTTG)n Simple_repeat Simple_repeat 4 38 0 21 0 0 0 chr18 40752826 40752847 -45924701 + AT_rich Low_complexity Low_complexity 1 21 0 232 290 0 0 chr18 40753431 40753500 -45924048 + GA-rich Low_complexity Low_complexity 2 70 0 180 0 0 0 chr18 40754450 40754470 -45923078 + (A)n Simple_repeat Simple_repeat 1 20 0 186 43 0 0 chr18 40754800 40754823 -45922725 + (CAAT)n Simple_repeat Simple_repeat 3 25 0 690 240 40 70 chr18 40757107 40757629 -45919919 + LTR37B LTR ERV1 7 468 0 21 0 0 0 chr18 40758455 40758476 -45919072 + AT_rich Low_complexity Low_complexity 1 21 0 941 188 5 42 chr18 40758548 40758602 -45918946 + MER5A DNA MER1_type 1 55 -134 2069 122 7 3 chr18 40758602 40758897 -45918651 - AluSg SINE Alu -14 296 1 941 188 5 42 chr18 40758897 40759034 -45918514 + MER5A DNA MER1_type 55 185 -4 339 244 94 16 chr18 40759195 40759322 -45918226 + L1ME4a LINE L1 5974 6110 -11 21 0 0 0 chr18 40760406 40760427 -45917121 + AT_rich Low_complexity Low_complexity 1 21 0 591 291 20 0 chr18 40761095 40761246 -45916302 + MER5A DNA MER1_type 2 155 -34 225 345 86 43 chr18 40761659 40761891 -45915657 + MIR SINE MIR 20 261 -1 402 359 53 25 chr18 40762094 40762339 -45915209 - MIR SINE MIR -3 259 8 22 0 0 0 chr18 40763425 40763447 -45914101 + AT_rich Low_complexity Low_complexity 1 22 0 230 0 0 32 chr18 40763895 40763926 -45913622 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 243 243 290 0 chr18 40764251 40764358 -45913190 - L3 LINE CR1 -752 825 688 2912 148 46 6 chr18 40764369 40764850 -45912698 - LTR1 LTR ERV1 -1 784 285 4161 109 36 57 chr18 40764850 40766162 -45911386 - pTR5 LTR ERV1 0 2468 1524 286 240 19 106 chr18 40766162 40766266 -45911282 - LTR1 LTR ERV1 -497 288 194 * 1532 119 12 12 chr18 40766251 40766503 -45911045 - LTR1 LTR ERV1 -533 252 1 2024 180 25 42 chr18 40767232 40767665 -45909883 + MSTB LTR MaLR 1 426 0 1033 164 34 42 chr18 40767940 40768178 -45909370 - MER46A DNA MER2_type 0 236 1 22 56 0 0 chr18 40768193 40768229 -45909319 + AT_rich Low_complexity Low_complexity 1 36 0 245 163 0 0 chr18 40769709 40769749 -45907799 - MLT2B2 LTR ERVL 0 554 515 455 0 0 18 chr18 40769749 40769805 -45907743 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 245 163 0 0 chr18 40769805 40769821 -45907727 - MLT2B2 LTR ERVL -38 516 459 372 77 0 0 chr18 40769873 40769925 -45907623 + (TG)n Simple_repeat Simple_repeat 1 52 0 1758 174 28 35 chr18 40769950 40770377 -45907171 - MLT2B2 LTR ERVL -43 472 1 505 293 116 0 chr18 40771162 40771283 -45906265 - MER113 DNA MER1_type? -56 465 359 934 214 148 45 chr18 40771283 40771642 -45905906 - MSTD LTR MaLR 0 396 1 505 293 116 0 chr18 40771642 40771752 -45905796 - MER113 DNA MER1_type? -162 359 207 305 353 48 34 chr18 40773404 40773611 -45903937 + MIR SINE MIR 47 256 -6 213 152 0 22 chr18 40774376 40774422 -45903126 + A-rich Low_complexity Low_complexity 1 45 0 203 233 0 27 chr18 40774572 40774645 -45902903 + (CATATA)n Simple_repeat Simple_repeat 2 72 0 21 0 0 0 chr18 40774712 40774733 -45902815 + AT_rich Low_complexity Low_complexity 1 21 0 412 317 68 6 chr18 40774819 40774980 -45902568 + MIR SINE MIR 34 204 -58 243 88 0 0 chr18 40774986 40775020 -45902528 + (TA)n Simple_repeat Simple_repeat 1 34 0 234 0 0 0 chr18 40775021 40775047 -45902501 + (GA)n Simple_repeat Simple_repeat 2 27 0 2002 283 36 38 chr18 40776152 40776606 -45900942 + MER21B LTR ERV1 10 475 -456 2189 116 3 3 chr18 40776606 40776909 -45900639 - AluSc SINE Alu -6 303 1 2002 283 36 38 chr18 40776909 40777243 -45900305 + MER21B LTR ERV1 475 808 -123 302 245 82 20 chr18 40777841 40777939 -45899609 - Charlie8 DNA MER1_type -2208 209 106 21 0 0 0 chr18 40777984 40778005 -45899543 + AT_rich Low_complexity Low_complexity 1 21 0 2077 102 25 0 chr18 40778138 40778421 -45899127 - AluY SINE Alu -21 290 1 247 341 44 55 chr18 40778916 40779098 -45898450 + MIR SINE MIR 65 244 -18 416 361 101 52 chr18 40779173 40779558 -45897990 + L2 LINE L2 2867 3270 -2 2382 98 0 0 chr18 40780090 40780395 -45897153 - AluSq SINE Alu -8 305 1 22 35 0 0 chr18 40783474 40783503 -45894045 + AT_rich Low_complexity Low_complexity 1 29 0 704 287 12 66 chr18 40783929 40784187 -45893361 - MLT1H LTR MaLR -276 273 30 4901 216 29 44 chr18 40785837 40786887 -45890661 + L1MB4 LINE L1 3816 4827 -1353 2161 137 0 0 chr18 40786887 40787187 -45890361 + AluSx SINE Alu 1 300 -12 4901 216 29 44 chr18 40787187 40787962 -45889586 + L1MB4 LINE L1 4827 5612 -568 947 215 45 42 chr18 40787964 40788008 -45889540 + L1MB4 LINE L1 5886 5928 -252 1903 152 64 3 chr18 40788008 40788336 -45889212 - MER7A DNA MER2_type 0 346 1 947 215 45 42 chr18 40788336 40788579 -45888969 + L1MB4 LINE L1 5928 6174 -6 188 375 10 65 chr18 40788993 40789193 -45888355 - MIR SINE MIR -30 232 44 257 220 17 17 chr18 40790742 40790801 -45886747 + MIR3 SINE MIR 110 168 -40 2039 130 32 35 chr18 40790962 40791338 -45886210 - THE1C LTR MaLR 0 375 1 27 62 0 0 chr18 40791424 40791472 -45886076 + AT_rich Low_complexity Low_complexity 1 48 0 1406 119 59 9 chr18 40793500 40793719 -45883829 - MER30 DNA MER1_type 0 230 1 25 0 0 0 chr18 40794070 40794095 -45883453 + AT_rich Low_complexity Low_complexity 1 25 0 246 401 54 6 chr18 40794846 40795013 -45882535 + MIR3 SINE MIR 31 205 -3 193 296 37 0 chr18 40795507 40795561 -45881987 - L2 LINE L2 -4 3268 3213 * 239 213 0 0 chr18 40795529 40795576 -45881972 - MIR SINE MIR -22 240 194 21 36 0 0 chr18 40795954 40795982 -45881566 + AT_rich Low_complexity Low_complexity 1 28 0 186 184 0 0 chr18 40796041 40796079 -45881469 - MIR SINE MIR -14 248 211 31 26 0 0 chr18 40799674 40799712 -45877836 + AT_rich Low_complexity Low_complexity 1 38 0 522 230 42 18 chr18 40800345 40800510 -45877038 - LTR41 LTR ERVL -604 169 1 22 0 0 0 chr18 40800740 40800762 -45876786 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18 40800817 40800841 -45876707 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr18 40800928 40800950 -45876598 + AT_rich Low_complexity Low_complexity 1 22 0 596 166 74 74 chr18 40801136 40801299 -45876249 - MSTB1 LTR MaLR 0 457 295 1818 158 143 31 chr18 40801317 40801702 -45875846 - MSTA LTR MaLR 0 428 1 972 163 56 93 chr18 40801702 40801971 -45875577 - MSTB1 LTR MaLR -173 259 1 204 40 0 0 chr18 40803579 40803604 -45873944 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 203 169 15 62 chr18 40805784 40805849 -45871699 + T-rich Low_complexity Low_complexity 3 64 0 245 206 15 0 chr18 40805868 40805936 -45871612 + (TA)n Simple_repeat Simple_repeat 1 69 0 234 271 18 82 chr18 40805940 40806111 -45871437 - L1ME LINE L1 -333 5821 5667 1644 267 19 30 chr18 40806287 40806827 -45870721 + HsTC2a DNA Tc2 19 552 -192 26 50 0 0 chr18 40807136 40807176 -45870372 + AT_rich Low_complexity Low_complexity 1 40 0 588 303 129 31 chr18 40807186 40807674 -45869874 - L1ME LINE L1 -1802 4344 3809 511 269 7 21 chr18 40807780 40807921 -45869627 + MIR SINE MIR 52 190 -72 401 209 137 0 chr18 40808113 40808159 -45869389 - L1MA10 LINE L1 -2 6332 6287 1244 235 47 47 chr18 40808159 40808605 -45868943 - L1ME1 LINE L1 -44 6122 5677 2479 137 23 5 chr18 40808656 40809088 -45868460 - L1MA4A LINE L1 -95 6208 5769 19212 174 16 14 chr18 40809111 40812877 -45864671 - L1PA13 LINE L1 -19 7582 3793 2403 80 3 10 chr18 40812877 40813190 -45864358 - AluY SINE Alu 0 311 1 19212 174 16 14 chr18 40813190 40814192 -45863356 - L1PA13 LINE L1 -3808 3793 2794 1459 152 9 4 chr18 40814198 40814429 -45863119 - L1PA13 LINE L1 -7339 242 11 4413 196 27 6 chr18 40814436 40814900 -45862648 - L1MA4A LINE L1 -520 5783 5330 207 0 0 0 chr18 40814900 40814923 -45862625 + (ATG)n Simple_repeat Simple_repeat 2 24 0 4413 196 27 6 chr18 40814923 40815863 -45861685 - L1MA4A LINE L1 -973 5330 4361 5120 147 78 56 chr18 40867879 40868178 -45809370 - Tigger3b DNA MER2_type -1798 1230 939 2326 109 0 3 chr18 40868178 40868489 -45809059 + AluSx SINE Alu 1 310 -2 5120 147 78 56 chr18 40868489 40869043 -45808505 - Tigger3b DNA MER2_type -2089 939 342 2551 71 0 0 chr18 40869043 40869354 -45808194 + AluY SINE Alu 1 311 0 5120 147 78 56 chr18 40869354 40869658 -45807890 - Tigger3b DNA MER2_type -2686 342 46 506 68 96 0 chr18 40869795 40869868 -45807680 - MADE1 DNA Mariner 0 80 1 222 348 105 54 chr18 40870315 40870611 -45806937 + L2 LINE L2 2962 3272 0 27 29 0 0 chr18 40870873 40870907 -45806641 + AT_rich Low_complexity Low_complexity 1 34 0 2331 108 0 3 chr18 40872059 40872373 -45805175 + AluSq SINE Alu 1 313 0 865 177 80 0 chr18 40873136 40873311 -45804237 - MER5A DNA MER1_type 0 189 1 530 315 35 15 chr18 40873458 40873655 -45803893 - MIR SINE MIR -13 249 49 251 268 27 27 chr18 40874154 40874266 -45803282 + (TA)n Simple_repeat Simple_repeat 2 113 0 2015 97 20 33 chr18 40874366 40874666 -45802882 - AluSx SINE Alu -16 296 1 684 283 54 91 chr18 40875049 40875399 -45802149 + MLT1J2 LTR MaLR 38 383 -67 323 300 20 40 chr18 40875968 40876068 -45801480 - L2 LINE L2 -252 3020 2923 15043 205 32 16 chr18 40876402 40878991 -45798557 + L1PB1 LINE L1 3 2549 -4318 210 118 0 0 chr18 40878991 40879025 -45798523 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 15043 205 32 16 chr18 40879025 40880120 -45797428 + L1PB1 LINE L1 2549 3625 -3242 213 65 0 0 chr18 40880120 40880151 -45797397 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 15043 205 32 16 chr18 40880151 40882736 -45794812 + L1PB1 LINE L1 3625 6496 -371 321 118 0 0 chr18 40882736 40882787 -45794761 + (TG)n Simple_repeat Simple_repeat 1 51 0 329 643 0 0 chr18 40882800 40882971 -45794577 + (CA)n Simple_repeat Simple_repeat 2 172 0 226 0 0 33 chr18 40882971 40882989 -45794559 + (TA)n Simple_repeat Simple_repeat 2 20 -10 2444 118 3 0 chr18 40882989 40883352 -45794196 + L1PB1 LINE L1 6498 6861 -6 226 0 0 33 chr18 40883352 40883363 -45794185 + (TA)n Simple_repeat Simple_repeat 20 30 0 210 309 21 32 chr18 40883372 40883466 -45794082 - L2 LINE L2 -234 3038 2946 205 264 32 136 chr18 40883847 40883972 -45793576 + L2 LINE L2 3158 3269 -3 321 352 60 25 chr18 40885201 40885400 -45792148 - MIR SINE MIR -30 232 27 181 267 75 67 chr18 40888188 40888308 -45789240 - L2 LINE L2 -18 3295 3175 361 286 71 21 chr18 40889239 40889379 -45788169 - MIR3 SINE MIR -3 205 59 3370 106 12 10 chr18 40890475 40890968 -45786580 + L1PA11 LINE L1 5669 6162 -12 351 314 162 24 chr18 40891517 40891851 -45785697 + L3 LINE CR1 966 1345 -232 2113 108 4 4 chr18 40892045 40892324 -45785224 + AluSg SINE Alu 1 279 -31 186 71 0 0 chr18 40892327 40892355 -45785193 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 25 51 0 0 chr18 40893144 40893183 -45784365 + AT_rich Low_complexity Low_complexity 1 39 0 571 226 132 104 chr18 40893443 40893846 -45783702 + L1MC3 LINE L1 20 433 -5993 4905 223 41 30 chr18 40893852 40894467 -45783081 + L1MC3 LINE L1 4927 4440 -1986 2019 141 78 9 chr18 40894467 40894814 -45782734 + THE1C LTR MaLR 1 371 -4 4905 223 41 30 chr18 40894814 40896071 -45781477 + L1MC3 LINE L1 4439 5681 -745 3780 136 0 2 chr18 40896064 40896658 -45780890 - L1P LINE L1 -4260 1886 1294 * 14965 105 14 11 chr18 40896657 40898860 -45778688 + L1MC3 LINE L1 2524 6534 -1251 5067 43 3 3 chr18 40898860 40899482 -45778066 + L1PA7 LINE L1 5527 6151 -3 14965 105 14 11 chr18 40899482 40899708 -45777840 + L1MC3 LINE L1 6534 6758 -1027 203 130 22 22 chr18 40899710 40899756 -45777792 + (CAAA)n Simple_repeat Simple_repeat 2 47 0 1606 163 45 0 chr18 40899768 40899877 -45777671 + AluSx SINE Alu 13 116 -196 212 0 0 35 chr18 40899877 40899906 -45777642 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1606 163 45 0 chr18 40899906 40900060 -45777488 + AluSx SINE Alu 116 288 -24 348 234 0 11 chr18 40900080 40900180 -45777368 + L1MC3 LINE L1 6774 6860 -925 757 118 0 28 chr18 40900180 40900324 -45777224 + (GAAA)n Simple_repeat Simple_repeat 3 142 0 3802 210 43 9 chr18 40900381 40901273 -45776275 + L1MC3 LINE L1 6856 7777 -8 28 48 0 0 chr18 40902100 40902142 -45775406 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr18 40902475 40902503 -45775045 + AT_rich Low_complexity Low_complexity 1 28 0 2624 203 48 87 chr18 40902730 40903027 -45774521 + MER21B LTR ERV1 1 308 -555 1896 138 11 0 chr18 40903027 40903351 -45774197 + AluSq SINE Alu 7 333 0 2624 203 48 87 chr18 40903351 40903820 -45773728 + MER21B LTR ERV1 308 738 -125 198 171 0 0 chr18 40904377 40904418 -45773130 + (CA)n Simple_repeat Simple_repeat 2 42 0 1801 130 3 57 chr18 40904704 40905005 -45772543 + AluSx SINE Alu 14 298 -14 255 226 29 49 chr18 40905044 40905146 -45772402 + MLT1J2 LTR MaLR 338 437 -13 384 286 97 17 chr18 40905966 40906141 -45771407 + MLT1J2 LTR MaLR 254 442 -8 515 286 73 34 chr18 40906383 40906617 -45770931 + MLT1H LTR MaLR 1 243 -306 1279 294 42 39 chr18 40906952 40907497 -45770051 + MLT1H LTR MaLR 1 547 -2 885 314 84 24 chr18 40908272 40908689 -45768859 + L2 LINE L2 2033 2474 -840 325 319 129 10 chr18 40908876 40909171 -45768377 + HAL1 LINE L1 1501 1830 -677 329 116 14 0 chr18 40909245 40909314 -45768234 + (TAGA)n Simple_repeat Simple_repeat 3 72 0 215 211 0 0 chr18 40909331 40909369 -45768179 + polypurine Low_complexity Low_complexity 4 41 0 1291 181 109 15 chr18 40910247 40910512 -45767036 + MSTA LTR MaLR 1 290 -138 680 199 60 48 chr18 40910529 40910570 -45766978 - MLT1B LTR MaLR -217 173 134 2176 169 43 10 chr18 40910570 40910984 -45766564 + MSTA LTR MaLR 1 428 0 680 199 60 48 chr18 40910984 40911108 -45766440 - MLT1B LTR MaLR -256 134 6 423 276 104 0 chr18 40911202 40911336 -45766212 + MIR SINE MIR 61 208 -54 334 254 59 42 chr18 40912200 40912318 -45765230 - L1ME3A LINE L1 -191 5979 5860 425 277 90 97 chr18 40912390 40912925 -45764623 - L1MC4a LINE L1 -45 6076 5546 187 309 0 29 chr18 40913287 40913355 -45764193 + MIR3 SINE MIR 113 178 -30 1393 223 3 49 chr18 40913355 40913682 -45763866 + AluJo SINE Alu 1 312 0 476 179 28 28 chr18 40913743 40913849 -45763699 + MLT2D LTR ERVL 1 106 -308 638 93 6 3 chr18 40913849 40914101 -45763447 + AluY SINE Alu 1 322 0 1471 170 80 18 chr18 40914101 40914377 -45763171 + MLT2D LTR ERVL 102 394 -20 247 91 0 0 chr18 40914423 40914456 -45763092 + MLT2D LTR ERVL 432 464 0 207 336 0 86 chr18 40914800 40914928 -45762620 + L2 LINE L2 3179 3295 -18 268 177 48 16 chr18 40917247 40917309 -45760239 - MER2 DNA MER2_type 0 345 282 * 610 284 34 28 chr18 40917284 40917460 -45760088 - MER8 DNA MER2_type -61 178 2 1977 155 0 7 chr18 40917783 40918092 -45759456 - AluSx SINE Alu -2 310 4 426 346 63 29 chr18 40918111 40918245 -45759303 - MIR SINE MIR -31 231 86 2628 112 5 3 chr18 40918245 40918619 -45758929 + THE1C LTR MaLR 1 375 0 426 346 63 29 chr18 40918619 40918689 -45758859 - MIR SINE MIR -176 86 20 23 54 0 0 chr18 40918973 40919010 -45758538 + AT_rich Low_complexity Low_complexity 1 37 0 219 146 0 0 chr18 40919229 40919270 -45758278 + (CA)n Simple_repeat Simple_repeat 1 41 0 543 326 64 49 chr18 40920065 40920647 -45756901 - L2 LINE L2 0 3313 2718 29 28 0 0 chr18 40920856 40920892 -45756656 + AT_rich Low_complexity Low_complexity 1 36 0 299 347 8 25 chr18 40921773 40921894 -45755654 + MIR3 SINE MIR 53 171 -37 206 108 0 54 chr18 40921926 40921963 -45755585 + (TTAA)n Simple_repeat Simple_repeat 1 35 0 1402 167 33 51 chr18 40921965 40922241 -45755307 - AluJo SINE Alu -18 294 24 494 355 17 12 chr18 40924559 40924731 -45752817 - MIR SINE MIR -70 192 20 1720 116 108 0 chr18 40925164 40925471 -45752077 - AluSq SINE Alu 0 313 1 2376 81 3 3 chr18 40925504 40925814 -45751734 + AluY SINE Alu 1 310 -1 447 236 39 24 chr18 40925820 40925947 -45751601 + MER5B DNA MER1_type 50 178 0 2445 56 0 0 chr18 40925996 40926284 -45751264 - AluY SINE Alu -10 301 14 296 325 172 0 chr18 40926362 40926525 -45751023 + MIR SINE MIR 53 243 -19 247 323 60 38 chr18 40926553 40926686 -45750862 - MIR3 SINE MIR -54 154 19 405 0 0 0 chr18 40926844 40926889 -45750659 + (CA)n Simple_repeat Simple_repeat 2 46 0 478 213 0 37 chr18 40926889 40926997 -45750551 - FLAM_A SINE Alu -36 106 3 1343 161 21 4 chr18 40927209 40927452 -45750096 - L1PA16 LINE L1 0 6166 5920 571 298 65 9 chr18 40927889 40928104 -45749444 + MIR SINE MIR 34 260 -2 601 44 11 11 chr18 40928363 40928453 -45749095 + (TCTA)n Simple_repeat Simple_repeat 2 91 0 271 343 67 22 chr18 40928468 40928602 -45748946 - MIR3 SINE MIR -6 202 63 364 263 26 27 chr18 40928952 40929096 -45748452 + L1MC4 LINE L1 6585 6703 -1339 237 635 11 0 chr18 40929099 40929277 -45748271 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 256 370 62 12 chr18 40929304 40929466 -45748082 + MIR3 SINE MIR 23 192 -16 742 264 5 47 chr18 40929602 40929795 -45747753 - MIR3 SINE MIR -3 205 21 215 270 0 14 chr18 40930787 40930861 -45746687 + L2 LINE L2 2297 2369 -945 226 266 92 98 chr18 40931281 40931465 -45746083 + MER5A DNA MER1_type 6 188 -1 207 0 0 0 chr18 40931924 40931947 -45745601 + (A)n Simple_repeat Simple_repeat 1 23 0 418 365 39 13 chr18 40931947 40932180 -45745368 + MIR SINE MIR 20 258 -4 387 0 0 0 chr18 40933683 40933726 -45743822 + (TG)n Simple_repeat Simple_repeat 2 44 0 30 0 0 0 chr18 40935003 40935033 -45742515 + AT_rich Low_complexity Low_complexity 1 30 0 365 188 0 0 chr18 40936477 40936541 -45741007 - L2 LINE L2 0 3272 3209 675 256 182 4 chr18 40937982 40938224 -45739324 - Charlie8 DNA MER1_type -2132 285 1 487 263 0 18 chr18 40938251 40938365 -45739183 + FLAM_A SINE Alu 5 116 -17 229 206 0 59 chr18 40938373 40938441 -45739107 + L1MC4 LINE L1 6640 6703 -1339 * 243 196 0 0 chr18 40938401 40938447 -45739101 - L1MC4 LINE L1 -1339 6703 6658 189 107 0 0 chr18 40941109 40941137 -45736411 + (TCTCC)n Simple_repeat Simple_repeat 5 32 0 21 82 0 0 chr18 40941420 40941469 -45736079 + AT_rich Low_complexity Low_complexity 1 49 0 23 33 0 0 chr18 40941500 40941530 -45736018 + AT_rich Low_complexity Low_complexity 1 30 0 429 322 72 38 chr18 40941940 40942204 -45735344 - L2 LINE L2 -95 3218 2946 883 312 55 18 chr18 40942206 40942549 -45734999 - L2 LINE L2 -2032 1282 927 3571 196 62 27 chr18 40942579 40943310 -45734238 + MER21B LTR ERV1 107 862 -1 836 142 119 40 chr18 40943320 40943459 -45734089 + L1MA6 LINE L1 3976 4133 -2013 2664 42 0 6 chr18 40943459 40943772 -45733776 + AluY SINE Alu 1 311 0 836 142 119 40 chr18 40943772 40943808 -45733740 + L1MA6 LINE L1 4133 4165 -1981 * 5260 165 12 48 chr18 40943802 40945091 -45732457 + L1MA6 LINE L1 4663 5902 -398 1613 183 0 10 chr18 40945091 40945380 -45732168 - AluJo SINE Alu -26 286 1 5260 165 12 48 chr18 40945380 40945766 -45731782 + L1MA6 LINE L1 5902 6300 0 1066 282 87 28 chr18 40945796 40946360 -45731188 - MER20B DNA MER1_type -152 631 35 213 286 26 26 chr18 40947736 40947813 -45729735 + CT-rich Low_complexity Low_complexity 3 79 0 1846 214 53 58 chr18 40948080 40948754 -45728794 - MER69 DNA AcHobo -10 2516 1846 1048 243 48 32 chr18 40949082 40949395 -45728153 - MER69 DNA AcHobo -869 357 40 225 254 56 42 chr18 40949524 40949595 -45727953 - L3 LINE CR1 -308 1269 1198 423 283 62 58 chr18 40949694 40950025 -45727523 + L1MC/D LINE L1 5472 5803 -359 1056 109 38 38 chr18 40950298 40950561 -45726987 - THE1B LTR MaLR 0 364 1 247 250 0 0 chr18 40950650 40950702 -45726846 + (CA)n Simple_repeat Simple_repeat 1 52 0 35 54 0 0 chr18 40954878 40954934 -45722614 + AT_rich Low_complexity Low_complexity 1 56 0 610 279 97 25 chr18 40954952 40955189 -45722359 - MIR SINE MIR -2 260 7 438 20 0 0 chr18 40955281 40955332 -45722216 + (CA)n Simple_repeat Simple_repeat 2 52 0 288 329 118 19 chr18 40955433 40955594 -45721954 - MIR SINE MIR -13 249 73 22 0 0 0 chr18 40955707 40955729 -45721819 + AT_rich Low_complexity Low_complexity 1 22 0 180 200 0 0 chr18 40956377 40956417 -45721131 + GA-rich Low_complexity Low_complexity 2 41 0 206 261 116 0 chr18 40956796 40956865 -45720683 - MIR SINE MIR -77 131 55 194 103 0 51 chr18 40957965 40958004 -45719544 + (AATAG)n Simple_repeat Simple_repeat 3 39 0 3046 189 13 74 chr18 40958571 40959284 -45718264 + LTR8 LTR ERV1 1 669 -22 501 367 80 26 chr18 40962002 40962716 -45714832 - L2 LINE L2 0 3313 2491 1471 180 29 47 chr18 40963114 40963394 -45714154 + AluJb SINE Alu 13 643 0 572 232 6 6 chr18 40963394 40963750 -45713798 + GA-rich Low_complexity Low_complexity 3 180 0 194 250 0 0 chr18 40964064 40964112 -45713436 - L2 LINE L2 0 3272 3225 306 0 0 0 chr18 40964388 40964422 -45713126 + (CA)n Simple_repeat Simple_repeat 2 35 0 247 407 105 0 chr18 40967400 40967572 -45709976 + MIR3 SINE MIR 19 208 0 1682 159 0 20 chr18 40967732 40968027 -45709521 - AluSq SINE Alu -14 299 11 2064 77 54 34 chr18 40972003 40972301 -45705247 + AluSx SINE Alu 3 306 -6 2089 128 3 3 chr18 40973644 40973950 -45703598 - AluSq SINE Alu -7 306 1 2336 84 0 7 chr18 40973992 40974290 -45703258 - AluY SINE Alu -15 296 1 192 97 0 0 chr18 40974761 40974792 -45702756 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 347 248 66 16 chr18 40976135 40976256 -45701292 - L1MCc LINE L1 -5514 909 783 841 289 60 52 chr18 40976403 40976922 -45700626 - L1MCc LINE L1 -5817 606 84 1557 139 0 0 chr18 40976954 40977169 -45700379 - AluSx SINE Alu -97 215 1 723 282 27 27 chr18 40977170 40977542 -45700006 - L1M4 LINE L1 -871 5275 4904 737 265 64 48 chr18 40977575 40977967 -45699581 + L1ME3 LINE L1 5266 5663 -499 494 204 10 10 chr18 40978129 40978227 -45699321 + LTR47A LTR ERVL 355 452 0 376 272 60 80 chr18 40978227 40978528 -45699020 + L1ME3 LINE L1 5661 5955 -207 344 242 40 0 chr18 40978924 40979023 -45698525 + LTR67 LTR ERVL 435 537 -20 764 208 12 0 chr18 40979552 40979720 -45697828 + LTR53 LTR ERVL 189 358 -161 401 221 18 53 chr18 40979875 40979988 -45697560 + LTR53 LTR ERVL 339 447 -72 480 264 44 41 chr18 40980301 40980537 -45697011 + MLT1K LTR MaLR 334 561 -27 4218 131 43 48 chr18 40980863 40981652 -45695896 + LTR1 LTR ERV1 1 785 0 205 314 35 23 chr18 40982628 40982714 -45694834 + L2 LINE L2 3227 3313 0 220 71 0 119 chr18 40984536 40984550 -45692998 - L2 LINE L2 -11 3302 3266 220 71 0 0 chr18 40984550 40984578 -45692970 - MIR SINE MIR -14 248 221 214 365 9 28 chr18 40984621 40984728 -45692820 + L2 LINE L2 2915 3019 -253 23 0 0 0 chr18 40985685 40985708 -45691840 + AT_rich Low_complexity Low_complexity 1 23 0 295 260 0 39 chr18 40986299 40986376 -45691172 - L2 LINE L2 -8 3305 3232 29 0 0 0 chr18 40986383 40986412 -45691136 + AT_rich Low_complexity Low_complexity 1 29 0 217 295 25 49 chr18 40986589 40986711 -45690837 - MIR SINE MIR -67 195 77 193 75 50 0 chr18 40986970 40987010 -45690538 + (TA)n Simple_repeat Simple_repeat 1 42 0 203 409 67 0 chr18 40987980 40988129 -45689419 + MIR3 SINE MIR 2 160 -48 1641 148 52 0 chr18 40988379 40988629 -45688919 + AluSg SINE Alu 32 294 -16 852 270 10 0 chr18 40989121 40989325 -45688223 - MIR SINE MIR -46 216 11 1999 128 3 7 chr18 40989902 40990199 -45687349 - AluSx SINE Alu -15 297 2 1750 311 35 18 chr18 40990352 40991052 -45686496 - L1ME3A LINE L1 -37 6116 5398 2190 121 7 0 chr18 40991052 40991358 -45686190 - AluSx SINE Alu -3 309 2 1750 311 35 18 chr18 40991358 40991487 -45686061 - L1ME3A LINE L1 -755 5398 5273 382 260 39 13 chr18 40991566 40991720 -45685828 - L1ME3A LINE L1 -872 5257 5100 33 0 0 0 chr18 40991875 40991908 -45685640 + AT_rich Low_complexity Low_complexity 1 33 0 1441 130 67 0 chr18 40991968 40992207 -45685341 - L1PB3 LINE L1 -7 6147 5893 355 277 35 15 chr18 40992437 40992639 -45684909 - L1ME3A LINE L1 -1674 4455 4250 1949 132 7 10 chr18 40992666 40992961 -45684587 + AluSq SINE Alu 1 294 -19 2536 230 55 14 chr18 40992993 40993580 -45683968 - MER82 DNA MER2_type -37 616 6 4092 243 62 42 chr18 40993754 40994659 -45682889 + L1M4 LINE L1 319 1281 -5365 1397 202 0 73 chr18 40994659 40994986 -45682562 + AluJo SINE Alu 1 303 -9 4092 243 62 42 chr18 40994986 40995806 -45681742 + L1M4 LINE L1 1281 2083 -4563 258 32 0 0 chr18 40995811 40995842 -45681706 + (TG)n Simple_repeat Simple_repeat 2 32 0 210 234 47 0 chr18 40995850 40995914 -45681634 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 390 242 71 59 chr18 40996223 40996562 -45680986 - L1ME3A LINE L1 -4001 2309 1967 225 305 126 0 chr18 40996768 40996863 -45680685 + MER58 DNA MER1_type 7 113 -228 289 313 22 0 chr18 40996941 40997075 -45680473 - L1ME3A LINE L1 -4579 1731 1595 343 281 76 38 chr18 40997215 40997652 -45679896 - L1MEd LINE L1 -4862 1257 904 288 0 0 0 chr18 41000029 41000061 -45677487 + (TA)n Simple_repeat Simple_repeat 2 33 0 1597 243 74 94 chr18 41002017 41002614 -45674934 - MLT1E LTR MaLR 0 593 9 21 0 0 0 chr18 41003155 41003176 -45674372 + AT_rich Low_complexity Low_complexity 1 21 0 2372 99 0 0 chr18 41005442 41005746 -45671802 + AluSg SINE Alu 1 304 -6 324 191 12 60 chr18 41005870 41005954 -45671594 + L2 LINE L2 3213 3292 -21 771 182 0 0 chr18 41008509 41008630 -45668918 - FLAM_A SINE Alu -12 121 1 2163 154 70 10 chr18 41008760 41009162 -45668386 + MSTB LTR MaLR 1 426 0 1159 43 0 0 chr18 41009388 41009566 -45667982 + L1PA4 LINE L1 5998 6175 0 223 307 67 13 chr18 41010639 41010714 -45666834 + MER91C DNA MER1_type 1 79 -61 431 338 60 70 chr18 41011211 41011938 -45665610 + L2 LINE L2 2507 3269 -3 335 361 64 67 chr18 41012002 41012345 -45665203 + L2 LINE L2 2930 3271 -1 201 328 60 0 chr18 41012838 41012905 -45664643 - L3b LINE CR1 -343 1240 1170 297 244 33 11 chr18 41013015 41013105 -45664443 - MIR3 SINE MIR -4 204 113 1859 62 79 8 chr18 41013202 41013474 -45664074 - AluY SINE Alu 0 312 24 246 220 60 110 chr18 41014159 41014259 -45663289 - MIR SINE MIR -29 233 139 2246 238 51 48 chr18 41014415 41015159 -45662389 + L1ME1 LINE L1 5416 6161 -5 2533 68 0 3 chr18 41015568 41015875 -45661673 + AluY SINE Alu 2 307 -4 180 0 0 0 chr18 41015883 41015903 -45661645 + (A)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr18 41015915 41015940 -45661608 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr18 41015982 41016010 -45661538 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 41016131 41016159 -45661389 + AT_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr18 41016197 41016225 -45661323 + AT_rich Low_complexity Low_complexity 1 28 0 1282 173 0 5 chr18 41016375 41016589 -45660959 + AluY SINE Alu 95 307 -4 189 0 0 0 chr18 41016597 41016618 -45660930 + (A)n Simple_repeat Simple_repeat 1 21 0 42763 33 22 1 chr18 41017776 41023822 -45653726 + L1PA2 LINE L1 2 6177 0 228 354 25 0 chr18 41024397 41024476 -45653072 + MIR3 SINE MIR 88 168 -40 542 302 99 22 chr18 41024877 41025099 -45652449 - MIR SINE MIR -4 258 20 2477 59 0 10 chr18 41026020 41026327 -45651221 + AluY SINE Alu 2 305 -6 248 0 31 0 chr18 41027927 41027959 -45649589 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 657 302 22 18 chr18 41028332 41028554 -45648994 - MIR SINE MIR -5 257 35 3809 179 26 11 chr18 41028555 41029271 -45648277 + MER50 LTR ERV1 8 734 0 498 322 98 25 chr18 41030251 41030732 -45646816 - LTR33 LTR ERVL -2 519 4 328 366 82 5 chr18 41030762 41030956 -45646592 + MIR SINE MIR 35 243 -19 1674 179 0 17 chr18 41031931 41032221 -45645327 + AluJb SINE Alu 1 285 -27 414 0 0 0 chr18 41032221 41032267 -45645281 + (CAAAC)n Simple_repeat Simple_repeat 2 47 0 497 306 114 5 chr18 41033885 41034104 -45643444 + MIR SINE MIR 20 262 0 24 0 0 0 chr18 41034201 41034225 -45643323 + AT_rich Low_complexity Low_complexity 1 24 0 397 305 67 18 chr18 41034231 41034395 -45643153 + MIR3 SINE MIR 35 206 -2 451 335 96 18 chr18 41035398 41035679 -45641869 - L2 LINE L2 0 3313 3011 2301 161 84 0 chr18 41037739 41038156 -45639392 - LTR47A LTR ERVL 0 452 1 2242 98 3 0 chr18 41038254 41038551 -45638997 + AluSq SINE Alu 1 298 -15 234 325 110 11 chr18 41040114 41040235 -45637313 - MIR SINE MIR -84 124 16 305 283 130 36 chr18 41040282 41040420 -45637128 - MER117 DNA MER1_type -45 152 2 23 0 0 0 chr18 41040770 41040793 -45636755 + AT_rich Low_complexity Low_complexity 1 23 0 410 239 59 95 chr18 41040856 41041078 -45636470 + L3b LINE CR1 1149 1362 -221 2061 145 3 0 chr18 41042320 41042631 -45634917 + AluSx SINE Alu 1 312 0 288 53 0 0 chr18 41043493 41043531 -45634017 + (CA)n Simple_repeat Simple_repeat 1 38 0 1400 213 117 26 chr18 41044485 41044945 -45632603 - LTR48B LTR ERV1 0 644 143 440 246 17 8 chr18 41044926 41045044 -45632504 - MER34 LTR ERV1 -423 119 1 * 24 32 0 0 chr18 41046029 41046060 -45631488 + AT_rich Low_complexity Low_complexity 1 31 0 302 205 8 33 chr18 41046219 41046341 -45631207 + CT-rich Low_complexity Low_complexity 4 122 0 2077 230 77 30 chr18 41046787 41047348 -45630200 - MLT1E LTR MaLR -3 590 4 350 306 135 31 chr18 41047753 41047975 -45629573 + L3b LINE CR1 1125 1369 -214 23 54 0 0 chr18 41048338 41048375 -45629173 + AT_rich Low_complexity Low_complexity 1 37 0 236 333 96 30 chr18 41048778 41048976 -45628572 - L3 LINE CR1 -184 1393 1183 231 245 0 0 chr18 41050124 41050177 -45627371 - L1MC4 LINE L1 -1337 6705 6653 2624 146 4 148 chr18 41050401 41050908 -45626640 + Tigger2 DNA MER2_type 1 2718 0 222 136 0 0 chr18 41053957 41054001 -45623547 + (CA)n Simple_repeat Simple_repeat 1 44 0 21 36 0 0 chr18 41055521 41055549 -45621999 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr18 41060533 41060564 -45616984 + AT_rich Low_complexity Low_complexity 1 31 0 1049 248 34 19 chr18 41060941 41061250 -45616298 + HERVL40 LTR ERVL 2819 5524 -6 2069 101 4 0 chr18 41061252 41061519 -45616029 + AluSx SINE Alu 2 269 -43 180 0 0 0 chr18 41061541 41061561 -45615987 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1150 216 43 62 chr18 41061580 41061782 -45615766 + LTR40a LTR ERVL 3 207 -312 1235 111 22 0 chr18 41061782 41061963 -45615585 - MER30B DNA MER1_type -4 186 2 1150 216 43 62 chr18 41061963 41062325 -45615223 + LTR40a LTR ERVL 207 516 -3 323 331 175 6 chr18 41062429 41062589 -45614959 - MIR3 SINE MIR -10 198 12 862 278 143 17 chr18 41063093 41063449 -45614099 - MLT1I LTR MaLR -8 401 1 254 235 8 68 chr18 41063662 41063820 -45613728 + GA-rich Low_complexity Low_complexity 2 236 0 231 140 0 0 chr18 41064363 41064413 -45613135 + (GA)n Simple_repeat Simple_repeat 1 50 0 367 182 31 164 chr18 41064434 41064593 -45612955 - MER63 DNA MER1_type -294 768 5 216 284 15 0 chr18 41064595 41064662 -45612886 + A-rich Low_complexity Low_complexity 3 70 0 180 77 0 0 chr18 41065352 41065378 -45612170 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 186 133 0 0 chr18 41066232 41066262 -45611286 + (TG)n Simple_repeat Simple_repeat 1 30 0 230 269 30 15 chr18 41066784 41066851 -45610697 + L2 LINE L2 3204 3271 -1 185 330 75 21 chr18 41067087 41067181 -45610367 - L2 LINE L2 -31 3282 3184 2083 152 126 5 chr18 41068146 41068528 -45609020 - MSTA LTR MaLR 0 428 1 6350 204 54 21 chr18 41068528 41069483 -45608065 - MSTA-int LTR MaLR 0 1651 729 2229 128 0 3 chr18 41069483 41069787 -45607761 - AluSx SINE Alu -9 303 1 6350 204 54 21 chr18 41069787 41069895 -45607653 - MSTA-int LTR MaLR -922 729 626 2107 136 3 0 chr18 41069895 41070190 -45607358 - AluSg SINE Alu -14 296 1 6350 204 54 21 chr18 41070190 41070470 -45607078 - MSTA-int LTR MaLR -1025 626 262 4107 116 128 32 chr18 41070470 41071842 -45605706 + pTR5 LTR ERV1 743 2606 0 1542 153 11 0 chr18 41071842 41072103 -45605445 - MSTA-int LTR MaLR -1314 266 3 1979 166 119 10 chr18 41072105 41072491 -45605057 - MSTA LTR MaLR 0 428 1 2151 195 87 15 chr18 41073605 41074140 -45603408 + LTR48B LTR ERV1 1 644 0 280 200 17 33 chr18 41074176 41074236 -45603312 - MER101 LTR ERV1 -41 433 375 1249 222 26 42 chr18 41074311 41074617 -45602931 - MER101B LTR ERV1 -269 301 1 617 191 8 15 chr18 41074749 41074880 -45602668 + LTR23 LTR ERV1 19 148 -289 974 152 31 97 chr18 41074958 41075248 -45602300 + LTR23 LTR ERV1 162 432 -5 2905 150 129 11 chr18 41075256 41075789 -45601759 + MER50 LTR ERV1 1 596 -138 576 235 41 18 chr18 41076246 41076416 -45601132 - MIR SINE MIR -3 259 86 299 335 30 46 chr18 41076940 41077203 -45600345 + L2 LINE L2 2153 2411 -903 189 0 0 0 chr18 41077513 41077534 -45600014 + (TTG)n Simple_repeat Simple_repeat 2 22 0 255 320 193 35 chr18 41077764 41078023 -45599525 + L2 LINE L2 3005 3304 -9 3235 180 136 24 chr18 41079031 41079774 -45597774 - LTR1B LTR ERV1 0 826 1 257 211 28 0 chr18 41080044 41080115 -45597433 + (TA)n Simple_repeat Simple_repeat 2 74 0 1955 143 76 12 chr18 41080352 41080694 -45596854 + THE1B LTR MaLR 1 364 0 369 0 0 0 chr18 41081746 41081787 -45595761 + (CA)n Simple_repeat Simple_repeat 2 42 0 345 299 14 28 chr18 41081890 41082034 -45595514 + CT-rich Low_complexity Low_complexity 3 144 0 22 0 0 0 chr18 41082578 41082600 -45594948 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr18 41083573 41083595 -45593953 + (A)n Simple_repeat Simple_repeat 1 22 0 583 306 29 0 chr18 41083932 41084102 -45593446 - MER5A DNA MER1_type -14 175 1 195 313 42 0 chr18 41085107 41085155 -45592393 + L2 LINE L2 3201 3250 -22 205 200 0 0 chr18 41086731 41086771 -45590777 + T-rich Low_complexity Low_complexity 2 41 0 22 56 0 0 chr18 41086854 41086890 -45590658 + AT_rich Low_complexity Low_complexity 1 36 0 393 226 12 0 chr18 41087502 41087586 -45589962 + MLT1I LTR MaLR 319 403 -6 315 330 119 28 chr18 41087733 41087909 -45589639 + MIR SINE MIR 70 261 -1 22 0 0 0 chr18 41088218 41088240 -45589308 + AT_rich Low_complexity Low_complexity 1 22 0 2652 96 5 26 chr18 41089456 41089841 -45587707 + MER4B LTR ERV1 230 606 -4 1275 196 9 0 chr18 41089842 41090071 -45587477 + MLT1A1 LTR MaLR 135 365 0 1696 257 66 9 chr18 41090296 41090752 -45586796 - MARNA DNA Mariner -7 579 98 220 309 0 15 chr18 41090780 41090848 -45586700 - MIR SINE MIR -55 153 87 235 329 108 42 chr18 41091271 41091511 -45586037 - L3 LINE CR1 -179 1398 1143 209 375 42 7 chr18 41091568 41091712 -45585836 - L3 LINE CR1 -440 1137 989 2194 85 27 3 chr18 41092516 41092809 -45584739 - AluSp SINE Alu -13 300 1 424 361 32 48 chr18 41093641 41093890 -45583658 - L2 LINE L2 -1 3271 3027 2077 122 0 3 chr18 41093954 41094082 -45583466 + AluSc SINE Alu 1 128 -181 297 0 0 0 chr18 41094082 41094115 -45583433 + (CA)n Simple_repeat Simple_repeat 2 34 0 2077 122 0 3 chr18 41094115 41094280 -45583268 + AluSc SINE Alu 128 293 -16 186 316 71 61 chr18 41094694 41094792 -45582756 - MIR SINE MIR -75 133 35 916 199 24 10 chr18 41094809 41095015 -45582533 + MER3 DNA MER1_type 1 209 0 363 271 8 8 chr18 41095309 41095369 -45582179 - L1MA10 LINE L1 -24 6310 6251 1686 221 46 92 chr18 41095369 41095427 -45582121 - L1ME1 LINE L1 -76 6159 6100 2383 60 0 10 chr18 41095427 41095725 -45581823 + AluY SINE Alu 1 295 -16 195 42 0 0 chr18 41095725 41095749 -45581799 + (TA)n Simple_repeat Simple_repeat 2 25 0 1686 221 46 92 chr18 41095749 41096345 -45581203 - L1ME1 LINE L1 -133 6102 5534 314 261 302 9 chr18 41096340 41096562 -45580986 - L1ME1 LINE L1 -1216 4999 4713 * 4297 274 104 55 chr18 41096594 41098816 -45578732 - L1ME1 LINE L1 -2739 3476 1363 1369 95 4 49 chr18 41098816 41099059 -45578489 - L1PA10 LINE L1 0 6168 5937 4297 274 104 55 chr18 41099059 41099784 -45577764 - L1ME1 LINE L1 -4852 1363 381 2125 191 36 9 chr18 41099784 41100204 -45577344 - MSTB1 LTR MaLR 0 432 2 4297 274 104 55 chr18 41100204 41100567 -45576981 - L1ME1 LINE L1 -5834 381 37 207 100 0 0 chr18 41100750 41100780 -45576768 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 761 107 53 12 chr18 41100805 41100974 -45576574 + CT-rich Low_complexity Low_complexity 3 178 0 242 104 0 21 chr18 41102558 41102606 -45574942 + (TA)n Simple_repeat Simple_repeat 1 47 0 1632 175 49 0 chr18 41102651 41102937 -45574611 - AluSx SINE Alu -12 300 1 456 299 71 30 chr18 41102937 41103134 -45574414 - MIR SINE MIR -44 218 14 1200 201 12 8 chr18 41103151 41103395 -45574153 - MLT1C LTR MaLR -2 465 221 986 184 37 41 chr18 41103452 41103670 -45573878 - MLT1C LTR MaLR -173 217 1 188 271 21 0 chr18 41103738 41103786 -45573762 + L2 LINE L2 3221 3269 -3 2355 230 51 62 chr18 41105921 41106757 -45570791 + MER99 DNA DNA 2 828 0 307 365 7 35 chr18 41107001 41107146 -45570402 + MIR SINE MIR 1 141 -121 229 274 0 16 chr18 41107149 41107211 -45570337 + MIR SINE MIR 118 178 -84 352 278 50 14 chr18 41107647 41107849 -45569699 - L1P5 LINE L1 -628 5528 5318 30 27 0 0 chr18 41109424 41109461 -45568087 + AT_rich Low_complexity Low_complexity 1 37 0 493 306 103 43 chr18 41109960 41110428 -45567120 - L3 LINE CR1 -155 1422 927 276 323 135 0 chr18 41110801 41110934 -45566614 - L3 LINE CR1 -743 834 684 630 289 37 50 chr18 41114292 41114510 -45563038 - MIR SINE MIR -3 259 45 195 339 92 18 chr18 41116258 41116367 -45561181 + L2 LINE L2 3137 3253 -19 220 128 0 0 chr18 41116638 41116677 -45560871 + L2 LINE L2 3275 3313 0 245 189 0 0 chr18 41117302 41117355 -45560193 + A-rich Low_complexity Low_complexity 1 53 0 1638 151 156 59 chr18 41118018 41118234 -45559314 - MSTA LTR MaLR 0 428 234 2268 74 10 17 chr18 41118234 41118532 -45559016 - AluSg SINE Alu -14 296 1 1638 151 156 59 chr18 41118532 41118705 -45558843 - MSTA LTR MaLR -194 234 1 1743 159 50 48 chr18 41119165 41119209 -45558339 - MLT2C1 LTR ERVL 0 397 355 1156 50 6 12 chr18 41119209 41119370 -45558178 + (TAGA)n Simple_repeat Simple_repeat 1 160 0 1743 159 50 48 chr18 41119370 41119721 -45557827 - MLT2C1 LTR ERVL -42 355 1 213 39 0 0 chr18 41119741 41119767 -45557781 + (CA)n Simple_repeat Simple_repeat 1 26 0 222 37 0 0 chr18 41120302 41120329 -45557219 + (TC)n Simple_repeat Simple_repeat 2 28 0 935 56 8 0 chr18 41120442 41120568 -45556980 + (GGAA)n Simple_repeat Simple_repeat 2 128 0 189 328 8 88 chr18 41120604 41120729 -45556819 - MIR3 SINE MIR -1 207 93 257 265 68 43 chr18 41120919 41121036 -45556512 + MLT1I LTR MaLR 5 124 -285 443 273 96 32 chr18 41121081 41121268 -45556280 + MLT1I LTR MaLR 200 398 -11 1753 198 28 38 chr18 41121299 41121693 -45555855 - MLT1B LTR MaLR 0 390 1 2408 34 37 13 chr18 41121896 41122194 -45555354 + AluY SINE Alu 6 310 -1 282 366 49 10 chr18 41122954 41123159 -45554389 + L3 LINE CR1 1064 1276 -301 368 227 43 57 chr18 41124300 41124441 -45553107 + MIR SINE MIR 117 255 -7 2155 114 0 14 chr18 41124830 41125127 -45552421 + AluSq SINE Alu 1 293 -20 439 331 77 77 chr18 41125623 41125961 -45551587 - L2 LINE L2 0 3272 2935 389 292 125 24 chr18 41126448 41126616 -45550932 + MIR SINE MIR 2 186 -76 21 36 0 0 chr18 41126897 41126925 -45550623 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 41128482 41128510 -45549038 + AT_rich Low_complexity Low_complexity 1 28 0 229 109 43 0 chr18 41128514 41128560 -45548988 + (TA)n Simple_repeat Simple_repeat 2 49 0 1938 211 80 49 chr18 41128880 41129468 -45548080 - L1ME2 LINE L1 -3 6161 5556 992 124 28 6 chr18 41129468 41129646 -45547902 - L1MA5 LINE L1 -4 6296 6115 1286 102 5 32 chr18 41129654 41129841 -45547707 + AluSg/x SINE Alu 131 312 0 2048 139 42 50 chr18 41129851 41130002 -45547546 - L1MA5 LINE L1 -179 6121 5970 2232 99 0 0 chr18 41130002 41130307 -45547241 + AluSg SINE Alu 1 305 0 2048 139 42 50 chr18 41130307 41130558 -45546990 - L1MA5 LINE L1 -330 5970 5721 615 154 0 27 chr18 41130558 41130626 -45546922 - U6 snRNA snRNA 0 107 42 2238 102 3 0 chr18 41130626 41130921 -45546627 - AluSg SINE Alu -14 296 1 615 154 0 27 chr18 41130921 41130962 -45546586 - U6 snRNA snRNA -65 42 1 318 292 6 89 chr18 41131534 41131692 -45545856 - MIR SINE MIR -63 145 10 240 292 42 14 chr18 41131817 41131889 -45545659 + MIR SINE MIR 17 90 -172 205 299 110 47 chr18 41134299 41134426 -45543122 - L2 LINE L2 -8 3305 3171 346 372 58 7 chr18 41134793 41135070 -45542478 - L2 LINE L2 -555 2759 2469 196 330 37 0 chr18 41135080 41135189 -45542359 - MIR SINE MIR -38 224 112 364 332 71 37 chr18 41135515 41135922 -45541626 + L1MC/D LINE L1 1224 1644 -4752 2010 104 0 0 chr18 41135971 41136231 -45541317 + AluSx SINE Alu 18 277 -35 191 59 0 29 chr18 41136233 41136267 -45541281 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 2166 99 20 0 chr18 41136398 41136690 -45540858 + AluSx SINE Alu 1 298 -14 2124 119 3 0 chr18 41136838 41137131 -45540417 + AluSx SINE Alu 1 294 -18 3685 110 42 8 chr18 41137307 41137884 -45539664 + MER51C LTR ERV1 1 640 0 893 311 77 64 chr18 41137960 41138206 -45539342 + L1MC/D LINE L1 2103 2344 -3871 2544 60 0 0 chr18 41138206 41138506 -45539042 + AluY SINE Alu 1 300 -11 893 311 77 64 chr18 41138506 41139013 -45538535 + L1MC/D LINE L1 2344 2843 -3372 1634 202 0 0 chr18 41139013 41139370 -45538178 - AluJb SINE Alu 0 357 1 893 311 77 64 chr18 41139370 41140055 -45537493 + L1MC/D LINE L1 2843 3521 -2694 235 300 100 31 chr18 41140261 41140551 -45536997 + L1MC/D LINE L1 3770 4079 -2136 282 297 75 31 chr18 41141058 41141351 -45536197 + L1MC/D LINE L1 4828 5133 -1082 606 297 46 33 chr18 41141513 41141969 -45535579 + L1MC/D LINE L1 5335 5797 -438 269 252 107 25 chr18 41142103 41142262 -45535286 + L1MC4 LINE L1 7864 8035 -7 1746 132 57 0 chr18 41143589 41143854 -45533694 + AluJb SINE Alu 1 280 -32 203 61 30 0 chr18 41143854 41143887 -45533661 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 2015 49 60 4 chr18 41143895 41144188 -45533360 + AluY SINE Alu 1 308 0 217 294 33 65 chr18 41146309 41146401 -45531147 - L3 LINE CR1 -1 1576 1488 969 223 33 81 chr18 41146572 41146904 -45530644 - L2 LINE L2 -1 3312 2997 2306 138 71 8 chr18 41146988 41147396 -45530152 + LTR49 LTR ERV1 7 427 -168 974 239 76 39 chr18 41147435 41147765 -45529783 + LTR48B LTR ERV1 303 644 0 488 339 37 12 chr18 41147765 41148010 -45529538 - L2 LINE L2 -450 2864 2614 236 326 37 67 chr18 41148117 41148252 -45529296 + L2 LINE L2 3122 3252 -20 1636 230 34 10 chr18 41148660 41149047 -45528501 - MSTD LTR MaLR 0 396 1 2929 166 27 29 chr18 41149324 41149533 -45528015 + MLT2B3 LTR ERVL 1 209 -345 1764 102 71 8 chr18 41149533 41149788 -45527760 + AluSp SINE Alu 42 312 -1 2929 166 27 29 chr18 41149788 41150092 -45527456 + MLT2B3 LTR ERVL 209 515 -39 249 33 0 0 chr18 41150092 41150122 -45527426 + (CCTA)n Simple_repeat Simple_repeat 2 31 0 2929 166 27 29 chr18 41150122 41150162 -45527386 + MLT2B3 LTR ERVL 515 554 0 271 198 23 12 chr18 41154889 41154975 -45522573 + (TA)n Simple_repeat Simple_repeat 1 87 0 528 197 0 84 chr18 41154985 41155009 -45522539 - FLAM_A SINE Alu -181 130 106 1840 151 165 11 chr18 41155009 41155379 -45522169 + MSTA LTR MaLR 2 428 0 528 197 0 84 chr18 41155379 41155496 -45522052 - FLAM_A SINE Alu -205 106 1 1717 204 67 77 chr18 41155523 41155939 -45521609 - MLT1D LTR MaLR 0 505 86 189 0 0 0 chr18 41155939 41155960 -45521588 + (TC)n Simple_repeat Simple_repeat 2 22 0 1977 150 14 0 chr18 41155960 41156253 -45521295 - AluSx SINE Alu -15 297 1 1717 204 67 77 chr18 41156253 41156340 -45521208 - MLT1D LTR MaLR -417 88 6 188 387 42 31 chr18 41156726 41156917 -45520631 + L2 LINE L2 2565 2757 -557 180 152 0 0 chr18 41157824 41157857 -45519691 + (TG)n Simple_repeat Simple_repeat 2 34 0 730 150 0 0 chr18 41158489 41158602 -45518946 + FRAM SINE Alu 42 154 -22 465 76 0 0 chr18 41158607 41158673 -45518875 + (TA)n Simple_repeat Simple_repeat 1 66 0 1779 161 23 7 chr18 41158900 41159205 -45518343 - AluSx SINE Alu -2 310 1 911 168 21 32 chr18 41159276 41159466 -45518082 - L1MC1 LINE L1 -2 6331 6144 3968 139 45 67 chr18 41159619 41160422 -45517126 - LTR1 LTR ERV1 0 785 1 2760 144 82 4 chr18 41160491 41161005 -45516543 - L1MC1 LINE L1 -184 6149 5596 1796 161 81 6 chr18 41161111 41161459 -45516089 + THE1C LTR MaLR 1 374 -1 387 0 0 0 chr18 41162500 41162543 -45515005 + (TG)n Simple_repeat Simple_repeat 2 44 0 273 267 0 0 chr18 41163148 41163208 -45514340 + (TG)n Simple_repeat Simple_repeat 2 61 0 186 311 244 0 chr18 41163565 41163684 -45513864 - MIR SINE MIR -70 192 45 208 319 105 56 chr18 41163841 41164107 -45513441 - L3b LINE CR1 -188 1395 1117 335 240 45 58 chr18 41165108 41165241 -45512307 - MIR SINE MIR -66 142 60 185 327 135 64 chr18 41166236 41166563 -45510985 + L3 LINE CR1 1066 1415 -162 183 275 0 0 chr18 41166772 41166812 -45510736 + L2 LINE L2 3252 3291 -22 739 256 14 54 chr18 41167380 41167603 -45509945 + MER20 DNA MER1_type 6 219 0 2750 19 3 0 chr18 41167708 41168018 -45509530 + AluY SINE Alu 1 311 0 1008 204 4 51 chr18 41168627 41168882 -45508666 - L1MB8 LINE L1 -6 6172 5930 * 7331 244 45 24 chr18 41168881 41171397 -45506151 - L1MB8 LINE L1 -1094 5052 2485 219 330 91 0 chr18 41171434 41171522 -45506026 + L2 LINE L2 3203 3298 -15 199 333 32 0 chr18 41172660 41172723 -45504825 + MIR SINE MIR 60 124 -84 299 255 58 34 chr18 41173269 41173415 -45504133 - MIR SINE MIR -65 143 34 183 296 25 37 chr18 41173446 41173527 -45504021 + MIR SINE MIR 52 131 -77 197 286 0 0 chr18 41174652 41174694 -45502854 + MER5B DNA MER1_type 1 42 -136 1806 147 0 52 chr18 41174695 41175022 -45502526 + AluJb SINE Alu 3 312 0 468 250 15 23 chr18 41175093 41175225 -45502323 - MER94 DNA DNA -1 133 3 236 328 82 8 chr18 41175522 41175644 -45501904 + L2 LINE L2 2932 3062 -210 187 259 74 0 chr18 41175964 41176018 -45501530 + MIR SINE MIR 86 143 -65 22 0 0 0 chr18 41176108 41176130 -45501418 + AT_rich Low_complexity Low_complexity 1 22 0 397 322 24 62 chr18 41181424 41181635 -45495913 + MIR SINE MIR 1 203 -59 2267 118 0 0 chr18 41182332 41182637 -45494911 + AluSx SINE Alu 1 305 -7 431 283 218 58 chr18 41182935 41183482 -45494066 + L3 LINE CR1 922 1555 -22 445 317 143 26 chr18 41184943 41185401 -45492147 - L2 LINE L2 -253 3060 2539 1892 125 0 0 chr18 41185484 41185740 -45491808 + AluSx SINE Alu 1 256 -56 271 212 76 0 chr18 41185741 41185807 -45491741 + AluSp/q SINE Alu 233 303 0 576 77 0 0 chr18 41185807 41185885 -45491663 + (GAGAA)n Simple_repeat Simple_repeat 3 80 0 1202 55 11 22 chr18 41185898 41186080 -45491468 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 334 302 0 0 chr18 41187919 41188025 -45489523 + (CATATA)n Simple_repeat Simple_repeat 2 107 0 3628 91 6 4 chr18 41188106 41188257 -45489291 + L1PB1 LINE L1 5640 5789 -362 216 67 0 0 chr18 41188257 41188287 -45489261 + (CA)n Simple_repeat Simple_repeat 2 31 0 3628 91 6 4 chr18 41188287 41188643 -45488905 + L1PB1 LINE L1 5789 6148 -3 476 287 30 30 chr18 41188659 41188889 -45488659 - L1ME1 LINE L1 -32 6134 5905 191 356 80 53 chr18 41189204 41189429 -45488119 + L2 LINE L2 3038 3268 -4 305 294 37 18 chr18 41190181 41190344 -45487204 + (TG)n Simple_repeat Simple_repeat 1 166 0 237 33 0 0 chr18 41190986 41191016 -45486532 + (TG)n Simple_repeat Simple_repeat 2 31 0 192 362 76 0 chr18 41191141 41191246 -45486302 - L2 LINE L2 0 3272 3160 2125 158 13 0 chr18 41191299 41191673 -45485875 + L1MB1 LINE L1 5789 6167 -1 279 324 110 6 chr18 41191678 41191851 -45485697 + L2 LINE L2 710 900 -2414 235 322 168 13 chr18 41191892 41192041 -45485507 + L2 LINE L2 2556 2727 -587 1658 231 32 34 chr18 41192177 41192644 -45484904 - MLT1C LTR MaLR -1 466 1 280 359 70 14 chr18 41193024 41193166 -45484382 - MIR3 SINE MIR -25 183 34 332 336 55 16 chr18 41193272 41193471 -45484077 + MIR SINE MIR 18 224 -38 180 111 0 0 chr18 41193511 41193538 -45484010 + (CATA)n Simple_repeat Simple_repeat 2 28 0 275 390 65 6 chr18 41193700 41193869 -45483679 - MIR SINE MIR -31 231 53 310 129 86 0 chr18 41195559 41195722 -45481826 + (TA)n Simple_repeat Simple_repeat 2 178 0 1148 236 160 56 chr18 41195756 41196204 -45481344 + L1MC4 LINE L1 7289 7808 -234 1122 229 9 5 chr18 41196204 41196427 -45481121 - MER58A DNA MER1_type 0 224 1 1148 236 160 56 chr18 41196427 41196534 -45481014 + L1MC4 LINE L1 7808 7902 -140 34 0 0 0 chr18 41197514 41197548 -45480000 + AT_rich Low_complexity Low_complexity 1 34 0 1396 220 40 88 chr18 41199645 41200123 -45477425 + MSTB2 LTR MaLR 1 455 -2 3941 271 135 63 chr18 41200127 41201744 -45475804 + MLT-int LTR MaLR 2 1735 0 1483 203 25 87 chr18 41201744 41202192 -45475356 + MSTB1 LTR MaLR 1 420 -12 14813 198 20 43 chr18 41204900 41205696 -45471852 + L1P3 LINE L1 202 1015 -5446 2343 97 0 7 chr18 41205696 41206006 -45471542 - AluSx SINE Alu -4 308 1 14813 198 20 43 chr18 41206006 41207661 -45469887 + L1P3 LINE L1 1015 2534 -3927 1942 92 107 0 chr18 41207661 41207933 -45469615 + AluY SINE Alu 1 301 -10 14813 198 20 43 chr18 41207933 41209657 -45467891 + L1P3 LINE L1 2534 4297 -2164 5474 112 23 2 chr18 41209653 41210486 -45467062 + L1PA11 LINE L1 5325 6174 0 * 22 35 0 0 chr18 41210591 41210620 -45466928 + AT_rich Low_complexity Low_complexity 1 29 0 1901 179 77 29 chr18 41211063 41211205 -45466343 - Tigger2a DNA MER2_type -2274 434 300 207 0 0 0 chr18 41211205 41211228 -45466320 + (TG)n Simple_repeat Simple_repeat 2 24 0 1901 179 77 29 chr18 41211228 41211499 -45466049 - Tigger2a DNA MER2_type -2408 300 1 28 71 0 0 chr18 41211752 41211808 -45465740 + AT_rich Low_complexity Low_complexity 1 56 0 2088 105 0 57 chr18 41212836 41213151 -45464397 - AluSx SINE Alu -15 297 1 1055 249 65 12 chr18 41213219 41213658 -45463890 + MER74A LTR ERVL 1 590 -32 925 222 11 6 chr18 41214093 41214273 -45463275 - MLT1D LTR MaLR -77 428 248 2319 262 72 62 chr18 41214383 41215670 -45461878 + L1ME1 LINE L1 778 2036 -4370 1907 162 0 0 chr18 41215670 41215954 -45461594 - AluJo SINE Alu -28 284 1 2319 262 72 62 chr18 41215954 41216487 -45461061 + L1ME1 LINE L1 2036 2562 -3844 3897 229 34 16 chr18 41216505 41217342 -45460206 - MER21B LTR ERV1 -11 852 1 6240 251 88 40 chr18 41217382 41218494 -45459054 + L1ME1 LINE L1 2595 3653 -2753 672 230 0 22 chr18 41218494 41218629 -45458919 + FLAM_C SINE Alu 2 133 0 6240 251 88 40 chr18 41218629 41220331 -45457217 + L1ME1 LINE L1 3653 5542 -864 2335 227 32 20 chr18 41220406 41221001 -45456547 + L1ME1 LINE L1 5547 6148 -278 703 255 54 32 chr18 41221006 41221376 -45456172 + L1ME1 LINE L1 5972 6397 -29 24 0 0 0 chr18 41221931 41221955 -45455593 + AT_rich Low_complexity Low_complexity 1 24 0 448 244 114 0 chr18 41222060 41222191 -45455357 + MIR SINE MIR 48 193 -69 275 285 65 32 chr18 41223396 41223519 -45454029 + MIR3 SINE MIR 50 176 -32 450 322 111 0 chr18 41224356 41224527 -45453021 - MER91A DNA MER1_type -3 193 4 2144 171 55 31 chr18 41225578 41225994 -45451554 + MSTB LTR MaLR 1 426 0 195 162 0 0 chr18 41229799 41229836 -45447712 + T-rich Low_complexity Low_complexity 1 37 0 2508 14 0 11 chr18 41230128 41230464 -45447084 + AluYa5 SINE Alu 1 333 0 2199 112 3 13 chr18 41231061 41231366 -45446182 - AluSc SINE Alu -5 304 3 201 280 0 0 chr18 41232742 41232792 -45444756 + L2 LINE L2 3248 3297 -16 788 236 39 26 chr18 41234134 41234363 -45443185 + MIR SINE MIR 14 245 -17 1194 281 3 7 chr18 41234699 41234991 -45442557 + AluJb SINE Alu 3 293 -9 30 27 0 0 chr18 41237290 41237327 -45440221 + AT_rich Low_complexity Low_complexity 1 37 0 987 208 6 0 chr18 41237855 41238028 -45439520 - FAM SINE Alu -1 174 1 325 259 52 30 chr18 41238296 41238431 -45439117 - MIR SINE MIR -3 259 122 1080 330 141 10 chr18 41238459 41239106 -45438442 + L2 LINE L2 2343 3070 -243 785 257 6 6 chr18 41239227 41239398 -45438150 - MER45A DNA AcHobo 0 178 8 266 333 111 0 chr18 41239492 41239609 -45437939 - MIR SINE MIR -131 131 2 239 349 41 27 chr18 41240377 41240523 -45437025 - MIR SINE MIR -87 175 28 32 26 0 0 chr18 41241218 41241257 -45436291 + AT_rich Low_complexity Low_complexity 1 39 0 688 294 33 35 chr18 41241845 41242212 -45435336 + L1MC4a LINE L1 5545 5910 -1898 216 200 0 0 chr18 41242289 41242334 -45435214 + (TATG)n Simple_repeat Simple_repeat 4 48 0 303 71 0 0 chr18 41242385 41242427 -45435121 + (CA)n Simple_repeat Simple_repeat 1 42 0 198 143 0 0 chr18 41242530 41242565 -45434983 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 405 109 16 0 chr18 41243845 41243909 -45433639 - MER92C LTR ERV1 0 554 490 264 306 43 81 chr18 41244554 41244740 -45432808 + L3b LINE CR1 1258 1436 -147 1715 162 57 19 chr18 41247161 41247476 -45430072 - MER61A LTR ERV1 0 343 17 20251 71 32 3 chr18 41247477 41251188 -45426360 - MER61A-int LTR ERV1 -1 5216 1320 311 169 24 19 chr18 41251181 41251293 -45426255 - MER61A-int LTR ERV1 -4440 777 632 * 28 29 0 0 chr18 41251341 41251376 -45426172 + GC_rich Low_complexity Low_complexity 1 35 0 1580 167 11 51 chr18 41251378 41251489 -45426059 - MER61A-int LTR ERV1 -4717 500 386 2411 56 0 13 chr18 41251489 41251791 -45425757 + AluY SINE Alu 3 300 -11 1580 167 11 51 chr18 41251791 41252033 -45425515 - MER61A-int LTR ERV1 -4831 386 161 1646 159 60 33 chr18 41252104 41252438 -45425110 - MER61A LTR ERV1 0 343 1 23 33 0 0 chr18 41256440 41256470 -45421078 + AT_rich Low_complexity Low_complexity 1 30 0 253 274 81 40 chr18 41256996 41257120 -45420428 + MIR SINE MIR 68 196 -66 2183 118 32 30 chr18 41258531 41258904 -45418644 - THE1C LTR MaLR -1 374 1 221 197 16 0 chr18 41258932 41258993 -45418555 + (TAAA)n Simple_repeat Simple_repeat 4 65 0 22 0 0 0 chr18 41259569 41259591 -45417957 + AT_rich Low_complexity Low_complexity 1 22 0 396 0 0 0 chr18 41259785 41259829 -45417719 + (TTA)n Simple_repeat Simple_repeat 2 45 0 23 33 0 0 chr18 41260215 41260245 -45417303 + AT_rich Low_complexity Low_complexity 1 30 0 19938 187 22 20 chr18 41260620 41261954 -45415594 - L1PA13 LINE L1 0 7601 6271 2235 101 0 25 chr18 41261954 41262271 -45415277 - AluY SINE Alu -2 309 1 19938 187 22 20 chr18 41262271 41263945 -45413603 - L1PA13 LINE L1 -1330 6271 4601 2067 132 3 0 chr18 41263945 41264234 -45413314 - AluSg SINE Alu -20 290 1 19938 187 22 20 chr18 41264234 41267717 -45409831 - L1PA13 LINE L1 -3000 4601 7 2216 122 3 0 chr18 41268132 41268444 -45409104 - AluSp SINE Alu 0 313 1 229 337 30 35 chr18 41269010 41269179 -45408369 - L2 LINE L2 -39 3274 3107 583 188 104 61 chr18 41269189 41269354 -45408194 - MER5A DNA MER1_type 0 189 4 737 329 163 33 chr18 41269428 41269907 -45407641 - L2 LINE L2 -308 3005 2589 3230 33 8 0 chr18 41269907 41270300 -45407248 + L1PA4 LINE L1 5760 6155 0 737 329 163 33 chr18 41270300 41270728 -45406820 - L2 LINE L2 -724 2589 1981 265 286 0 0 chr18 41271055 41271118 -45406430 + G-rich Low_complexity Low_complexity 2 64 0 482 90 0 26 chr18 41271118 41271196 -45406352 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 216 129 16 32 chr18 41273072 41273134 -45404414 + GA-rich Low_complexity Low_complexity 2 62 0 182 114 0 29 chr18 41273803 41273838 -45403710 + (CAAAC)n Simple_repeat Simple_repeat 2 35 0 25 31 0 0 chr18 41275248 41275280 -45402268 + AT_rich Low_complexity Low_complexity 1 32 0 298 263 25 0 chr18 41275657 41275737 -45401811 + GA-rich Low_complexity Low_complexity 2 83 0 201 200 0 40 chr18 41276372 41276422 -45401126 + T-rich Low_complexity Low_complexity 2 49 0 413 203 0 0 chr18 41276692 41276761 -45400787 + FLAM_A SINE Alu 23 91 -51 190 333 46 46 chr18 41277156 41277243 -45400305 - L2 LINE L2 -49 3223 3137 3364 131 29 29 chr18 41277619 41278146 -45399402 - MER1A DNA MER1_type 0 527 1 28 0 0 0 chr18 41278188 41278216 -45399332 + AT_rich Low_complexity Low_complexity 1 28 0 365 244 0 0 chr18 41278657 41278760 -45398788 + AluS SINE Alu 1 79 -224 1360 118 76 0 chr18 41279470 41279681 -45397867 - MER30 DNA MER1_type 0 230 4 226 313 70 9 chr18 41280709 41280824 -45396724 + MLT1I LTR MaLR 1 122 -287 347 237 37 82 chr18 41280919 41281054 -45396494 + MLT1I LTR MaLR 281 409 0 357 131 0 0 chr18 41281453 41281514 -45396034 + (TG)n Simple_repeat Simple_repeat 2 62 0 2371 118 16 22 chr18 41281582 41281948 -45395600 + THE1B LTR MaLR 1 364 0 605 323 40 14 chr18 41282152 41282375 -45395173 - MIR SINE MIR -26 236 8 316 267 44 43 chr18 41283454 41283687 -45393861 - MER69 DNA AcHobo -2 2524 2279 621 284 75 19 chr18 41283775 41284095 -45393453 - L1MD2 LINE L1 -251 6108 5771 394 202 77 62 chr18 41284139 41284240 -45393308 - MER69 DNA AcHobo -300 2226 2128 2246 103 20 0 chr18 41284240 41284540 -45393008 + AluSq SINE Alu 1 306 -7 394 202 77 62 chr18 41284540 41284646 -45392902 - MER69 DNA AcHobo -398 2128 2016 1157 285 30 14 chr18 41284650 41285088 -45392460 - MER69 DNA AcHobo -1958 568 124 281 276 115 25 chr18 41286194 41286319 -45391229 + L1ME LINE L1 5602 5714 -407 2067 158 37 8 chr18 41286319 41286698 -45390850 - MLT1B LTR MaLR 0 390 1 281 276 115 25 chr18 41286698 41286815 -45390733 + L1ME LINE L1 5714 5866 -255 733 217 6 37 chr18 41286843 41287004 -45390544 + FAM SINE Alu 1 156 -19 252 122 0 0 chr18 41287011 41287052 -45390496 + (CA)n Simple_repeat Simple_repeat 2 42 0 2046 127 26 7 chr18 41287609 41287916 -45389632 + AluSq SINE Alu 1 313 0 7969 16 1 0 chr18 41288134 41289833 -45387715 - L1HS LINE L1 -52 6103 4404 297 330 35 103 chr18 41290908 41291190 -45386358 - L2 LINE L2 -1 3271 3009 483 18 0 0 chr18 41291587 41291643 -45385905 + (CA)n Simple_repeat Simple_repeat 1 56 0 306 366 6 34 chr18 41293072 41293247 -45384301 + MIR SINE MIR 79 248 -14 243 307 40 60 chr18 41295452 41295552 -45381996 + L3 LINE CR1 1429 1527 -50 566 199 232 0 chr18 41295552 41295703 -45381845 - MER5A DNA MER1_type -3 186 1 243 307 40 60 chr18 41295703 41295752 -45381796 + L3 LINE CR1 1527 1575 -2 242 300 2 113 chr18 41296636 41296851 -45380697 - MIR SINE MIR -42 220 30 294 143 0 0 chr18 41297150 41297199 -45380349 + (TTCC)n Simple_repeat Simple_repeat 4 52 0 1781 240 0 3 chr18 41297721 41298087 -45379461 + MLT1A1 LTR MaLR 1 365 0 256 343 66 22 chr18 41301328 41301465 -45376083 + MIR3 SINE MIR 5 147 -61 957 474 6 0 chr18 41303507 41303851 -45373697 - MER7A DNA MER2_type 0 346 3 192 40 0 0 chr18 41303867 41303892 -45373656 + (CA)n Simple_repeat Simple_repeat 1 25 0 284 360 36 74 chr18 41303899 41304235 -45373313 + L2 LINE L2 2915 3237 -35 255 280 43 32 chr18 41304656 41304749 -45372799 - MIR3 SINE MIR -103 105 12 206 224 0 0 chr18 41304826 41304875 -45372673 + GA-rich Low_complexity Low_complexity 4 52 0 340 260 34 82 chr18 41304995 41305042 -45372506 - MIR SINE MIR -2 260 212 279 0 0 0 chr18 41305042 41305073 -45372475 + (CAT)n Simple_repeat Simple_repeat 2 32 0 340 260 34 82 chr18 41305073 41305233 -45372315 - MIR SINE MIR -50 212 63 577 119 0 0 chr18 41305427 41305511 -45372037 + AluJ/FLAM SINE Alu 1 84 -228 3801 134 53 0 chr18 41307211 41307831 -45369717 - MER39B LTR ERV1 0 653 1 295 297 74 20 chr18 41308234 41308382 -45369166 + L3 LINE CR1 502 657 -920 655 374 68 20 chr18 41308946 41309449 -45368099 + L3 LINE CR1 1032 1558 -19 282 176 20 0 chr18 41309614 41309665 -45367883 - MIR SINE MIR 0 262 211 21 36 0 0 chr18 41309724 41309752 -45367796 + AT_rich Low_complexity Low_complexity 1 28 0 230 363 65 8 chr18 41310697 41310821 -45366727 - MIR SINE MIR -80 182 52 260 247 135 67 chr18 41311302 41311391 -45366157 - L2 LINE L2 -2 3270 3176 1438 314 103 34 chr18 41311441 41312296 -45365252 - L2 LINE L2 -297 3016 2105 348 148 0 0 chr18 41315118 41315179 -45362369 + (TCCA)n Simple_repeat Simple_repeat 3 63 0 204 340 53 21 chr18 41315195 41315289 -45362259 - L2 LINE L2 -18 3295 3199 413 247 0 0 chr18 41317752 41317837 -45359711 + MIR3 SINE MIR 121 205 -3 25 0 0 0 chr18 41319124 41319149 -45358399 + AT_rich Low_complexity Low_complexity 1 25 0 184 279 70 70 chr18 41319201 41319330 -45358218 + MIR3 SINE MIR 40 168 -40 2612 45 0 3 chr18 41320003 41320311 -45357237 + AluY SINE Alu 3 309 -2 21 0 0 0 chr18 41320973 41320994 -45356554 + AT_rich Low_complexity Low_complexity 1 21 0 33 25 0 0 chr18 41321397 41321437 -45356111 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr18 41321874 41321895 -45355653 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 41321983 41322015 -45355533 + AT_rich Low_complexity Low_complexity 1 32 0 182 61 0 30 chr18 41322052 41322085 -45355463 + (TTTTTA)n Simple_repeat Simple_repeat 3 34 0 182 258 0 81 chr18 41323405 41323467 -45354081 + MIR3 SINE MIR 123 179 -29 197 196 18 18 chr18 41323520 41323576 -45353972 - MIR SINE MIR -108 154 99 315 0 0 0 chr18 41324561 41324596 -45352952 + (TG)n Simple_repeat Simple_repeat 2 36 0 362 264 0 0 chr18 41325013 41325104 -45352444 + MIR SINE MIR 171 261 -1 460 291 57 19 chr18 41325189 41325347 -45352201 - MLT1F LTR MaLR -378 164 1 283 326 17 51 chr18 41325464 41325639 -45351909 - MIR SINE MIR -6 256 88 2081 82 0 0 chr18 41327085 41327341 -45350207 + AluSg SINE Alu 30 285 -25 217 323 75 11 chr18 41327619 41327712 -45349836 - L2 LINE L2 -31 3282 3184 251 250 100 17 chr18 41330870 41330930 -45346618 + MIR SINE MIR 88 152 -56 245 109 22 0 chr18 41331451 41331497 -45346051 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 2412 226 21 46 chr18 41332721 41333295 -45344253 + L1MC/D LINE L1 4727 5314 -1030 1151 94 108 0 chr18 41333295 41333498 -45344050 - L1MA8 LINE L1 -7 6284 6060 2412 226 21 46 chr18 41333498 41333796 -45343752 + L1MC/D LINE L1 5314 5570 -774 1411 189 7 14 chr18 41333796 41334137 -45343411 - AluJb SINE Alu 0 343 5 2412 226 21 46 chr18 41334137 41334256 -45343292 + L1MC/D LINE L1 5570 5690 -654 180 312 147 32 chr18 41335105 41335323 -45342225 + L3 LINE CR1 1165 1407 -170 1190 195 23 5 chr18 41335338 41335559 -45341989 - AluJo SINE Alu -87 225 1 299 282 0 0 chr18 41335993 41336071 -45341477 - MER5A DNA MER1_type -85 104 27 196 328 134 25 chr18 41336545 41336664 -45340884 + L2 LINE L2 3176 3307 -6 23 0 0 0 chr18 41337454 41337477 -45340071 + AT_rich Low_complexity Low_complexity 1 23 0 378 127 0 0 chr18 41337854 41337957 -45339591 + Alu SINE Alu 228 330 0 653 229 8 0 chr18 41337969 41338100 -45339448 + FLAM_A SINE Alu 1 132 -1 1794 237 58 56 chr18 41338922 41339526 -45338022 + MER77 LTR ERV1 1 605 0 537 300 79 50 chr18 41340487 41340790 -45336758 - LTR16A1 LTR ERVL 0 457 146 539 284 103 35 chr18 41341605 41341837 -45335711 + MLT1H LTR MaLR 39 286 -263 615 217 14 25 chr18 41341896 41342056 -45335492 + MLT1H LTR MaLR 392 590 0 512 56 14 0 chr18 41342423 41342495 -45335053 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 547 262 53 118 chr18 41343318 41343673 -45333875 - L1ME LINE L1 -5456 614 283 414 329 119 40 chr18 41344970 41345414 -45332134 - L2 LINE L2 0 3313 2835 836 324 41 10 chr18 41345603 41345746 -45331802 - L2 LINE L2 -780 2534 2397 2089 125 34 0 chr18 41345746 41346041 -45331507 + AluSq SINE Alu 1 305 -8 836 324 41 10 chr18 41346041 41346289 -45331259 - L2 LINE L2 -917 2397 2131 258 258 46 168 chr18 41346290 41346791 -45330757 - L2 LINE L2 -1362 1952 1513 695 304 144 28 chr18 41346868 41347256 -45330292 + LTR16A LTR ERVL 18 450 0 325 292 56 45 chr18 41347256 41347434 -45330114 + HERV16 LTR ERVL 1 180 -4816 600 282 45 5 chr18 41347941 41348143 -45329405 + HERV16 LTR ERVL 808 1017 -3979 2001 123 0 48 chr18 41348145 41348454 -45329094 + AluSx SINE Alu 1 294 -18 2051 101 0 4 chr18 41348456 41348732 -45328816 + AluY SINE Alu 1 275 -36 204 40 0 0 chr18 41348740 41348765 -45328783 + (TAAAA)n Simple_repeat Simple_repeat 2 26 0 823 347 28 53 chr18 41348765 41349333 -45328215 + HERV16 LTR ERVL 1009 1562 -3434 501 274 6 25 chr18 41349412 41349569 -45327979 + HERV16 LTR ERVL 1715 1868 -3128 1837 241 23 33 chr18 41349615 41350134 -45327414 + LTR40a LTR ERVL 3 516 -3 635 346 47 49 chr18 41350408 41350943 -45326605 + ERVL LTR ERVL 3341 3874 -1780 310 368 44 0 chr18 41351518 41351654 -45325894 + MIR SINE MIR 2 143 -119 605 306 190 42 chr18 41352234 41352933 -45324615 - HAL1 LINE L1 0 2507 1705 1355 155 28 53 chr18 41352933 41353217 -45324331 - MSTA LTR MaLR 0 428 152 1021 103 7 0 chr18 41353217 41353362 -45324186 + AluSg/x SINE Alu 163 308 -2 1618 241 37 74 chr18 41354155 41354695 -45322853 + MLT2B1 LTR ERVL 1 520 0 308 373 6 33 chr18 41355117 41355311 -45322237 + MIR SINE MIR 21 206 -56 209 321 73 66 chr18 41355702 41355839 -45321709 - MIR3 SINE MIR -6 202 65 268 363 128 39 chr18 41358579 41358783 -45318765 + L2 LINE L2 2677 2898 -416 207 372 13 19 chr18 41358793 41358949 -45318599 + L2 LINE L2 2475 2629 -685 373 314 192 8 chr18 41358978 41359348 -45318200 - L2 LINE L2 -971 2343 1906 192 171 29 0 chr18 41359363 41359398 -45318150 - MIR SINE MIR -9 253 218 22 0 0 0 chr18 41359402 41359424 -45318124 + AT_rich Low_complexity Low_complexity 1 22 0 1827 211 8 3 chr18 41359520 41359881 -45317667 + MLT1A1 LTR MaLR 1 363 -2 5715 236 59 58 chr18 41359883 41361614 -45315934 + MLT1A1-int LTR MaLR 2 1734 -1 1660 203 49 11 chr18 41361618 41361967 -45315581 + MLT1A1 LTR MaLR 4 365 0 223 222 0 48 chr18 41362410 41362473 -45315075 + L2 LINE L2 3250 3309 -4 201 74 0 0 chr18 41362567 41362594 -45314954 + (A)n Simple_repeat Simple_repeat 1 27 0 608 322 26 13 chr18 41363528 41363755 -45313793 + L2 LINE L2 2475 2704 -610 562 298 92 9 chr18 41364780 41364998 -45312550 + MIR SINE MIR 27 262 0 22 56 0 0 chr18 41366476 41366512 -45311036 + AT_rich Low_complexity Low_complexity 1 36 0 185 0 0 39 chr18 41368617 41368643 -45308905 + (TTA)n Simple_repeat Simple_repeat 3 27 0 1769 79 0 8 chr18 41368643 41368884 -45308664 - L1PA5 LINE L1 -18 6136 5898 21 0 0 0 chr18 41370547 41370568 -45306980 + AT_rich Low_complexity Low_complexity 1 21 0 339 286 105 36 chr18 41370577 41370853 -45306695 + L1ME2 LINE L1 942 1236 -4883 21 36 0 0 chr18 41371539 41371567 -45305981 + AT_rich Low_complexity Low_complexity 1 28 0 397 283 209 7 chr18 41371825 41372214 -45305334 + L1ME2 LINE L1 2327 2636 -3493 247 65 43 0 chr18 41372214 41372260 -45305288 + (TAGA)n Simple_repeat Simple_repeat 2 49 0 397 283 209 7 chr18 41372260 41372431 -45305117 + L1ME2 LINE L1 2636 3000 -3129 484 285 53 102 chr18 41372483 41372935 -45304613 + L1ME2 LINE L1 3005 3434 -2695 42378 37 22 7 chr18 41373033 41379098 -45298450 + L1PA2 LINE L1 1 6153 -2 805 294 85 39 chr18 41379198 41380494 -45297054 + L1ME2 LINE L1 3458 4813 -1316 311 294 98 14 chr18 41380589 41380732 -45296816 + L1ME2 LINE L1 5226 5380 -749 6262 161 37 28 chr18 41380732 41381108 -45296440 + L1MA6 LINE L1 4071 4442 -1858 2305 97 0 25 chr18 41381108 41381427 -45296121 + AluSx SINE Alu 1 311 -1 6262 161 37 28 chr18 41381427 41383238 -45294310 + L1MA6 LINE L1 4442 6294 -6 1615 224 95 11 chr18 41383278 41383626 -45293922 + ERVL-B1 LTR ERVL 3068 3444 -2320 4715 164 54 16 chr18 41383629 41384315 -45293233 + ERVL-B1 LTR ERVL 4854 5581 -183 1808 162 159 8 chr18 41384315 41384685 -45292863 - MSTA LTR MaLR 0 428 3 4715 164 54 16 chr18 41384685 41384869 -45292679 + ERVL-B1 LTR ERVL 5581 5757 -7 2134 219 49 24 chr18 41384869 41385376 -45292172 + MLT2B1 LTR ERVL 1 520 0 634 314 108 10 chr18 41386839 41387145 -45290403 - MLT1I LTR MaLR -8 401 66 1191 264 148 4 chr18 41390424 41390890 -45286658 + L1ME2 LINE L1 5605 6137 -10 514 141 67 107 chr18 41391233 41391382 -45286166 - LTR45B LTR ERV1 -4 485 343 2207 101 10 0 chr18 41391938 41392226 -45285322 - AluSc SINE Alu -18 291 1 615 273 100 5 chr18 41392754 41392974 -45284574 - LTR16C LTR ERVL -3 488 248 1040 283 73 16 chr18 41393603 41393974 -45283574 - LTR16C LTR ERVL -3 488 97 240 356 29 29 chr18 41394260 41394364 -45283184 - MIR SINE MIR -72 136 33 754 247 22 0 chr18 41394396 41394578 -45282970 + MER5A DNA MER1_type 2 187 -2 291 312 13 0 chr18 41394948 41395025 -45282523 + MIR3 SINE MIR 83 160 -48 21 0 0 0 chr18 41395256 41395277 -45282271 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr18 41396145 41396169 -45281379 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr18 41396278 41396300 -45281248 + AT_rich Low_complexity Low_complexity 1 22 0 186 236 109 0 chr18 41396318 41396373 -45281175 - MIR SINE MIR -90 172 112 194 258 31 109 chr18 41397872 41398000 -45279548 + MIR SINE MIR 95 212 -50 869 223 175 15 chr18 41398000 41398337 -45279211 + LTR37A LTR ERV1 36 426 0 2347 104 0 0 chr18 41398942 41399250 -45278298 - AluSc SINE Alu -1 308 1 408 189 86 169 chr18 41399328 41399641 -45277907 + MER31-int LTR ERV1 1150 1436 -3500 12179 129 14 12 chr18 41399923 41401864 -45275684 - Tigger1 DNA MER2_type 0 2418 474 1061 224 0 59 chr18 41401875 41402147 -45275401 - AluJo SINE Alu -22 290 35 2725 174 19 12 chr18 41402147 41402630 -45274918 - Tigger1 DNA MER2_type -1931 487 2 21 0 0 0 chr18 41402903 41402924 -45274624 + AT_rich Low_complexity Low_complexity 1 21 0 2348 249 16 27 chr18 41403397 41404036 -45273512 + MER31-int LTR ERV1 3618 4249 -687 310 264 0 11 chr18 41404040 41404127 -45273421 + LTR37A LTR ERV1 5 90 -336 1044 164 39 10 chr18 41404136 41404344 -45273204 - Tigger1 DNA MER2_type -3 2415 2202 862 171 0 44 chr18 41404340 41404498 -45273050 - Tigger1 DNA MER2_type -2267 151 1 * 336 48 0 0 chr18 41404638 41404680 -45272868 + (TG)n Simple_repeat Simple_repeat 2 43 0 349 194 85 31 chr18 41404692 41404821 -45272727 + LTR37A LTR ERV1 291 426 0 180 0 0 0 chr18 41404902 41404922 -45272626 + (TC)n Simple_repeat Simple_repeat 2 21 0 225 196 0 0 chr18 41404922 41404968 -45272580 + (TA)n Simple_repeat Simple_repeat 2 47 0 204 40 0 0 chr18 41405037 41405062 -45272486 + (TAGA)n Simple_repeat Simple_repeat 3 27 0 2317 119 8 8 chr18 41405192 41405545 -45272003 + THE1A LTR MaLR 1 353 -2 11262 107 5 1 chr18 41405547 41407120 -45270428 + THE1A-int LTR MaLR 1 1580 0 2209 124 6 25 chr18 41407120 41407482 -45270066 + THE1A LTR MaLR 1 355 0 261 153 69 56 chr18 41407486 41407558 -45269990 + L1MC4 LINE L1 6626 6698 -1344 183 316 138 7 chr18 41407762 41407914 -45269634 + MIR SINE MIR 34 205 -57 474 318 117 5 chr18 41408900 41409114 -45268434 - MIR SINE MIR -16 246 9 22 0 0 0 chr18 41411252 41411274 -45266274 + AT_rich Low_complexity Low_complexity 1 22 0 380 329 107 8 chr18 41411506 41411740 -45265808 - LTR33 LTR ERVL -2 519 263 185 0 0 39 chr18 41411918 41411944 -45265604 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2055 98 4 4 chr18 41411948 41412223 -45265325 - AluSx SINE Alu -37 275 1 655 305 74 30 chr18 41412432 41412796 -45264752 + MLT1I LTR MaLR 3 382 -27 266 318 62 99 chr18 41413159 41413401 -45264147 - L3b LINE CR1 -2 1581 1349 1470 212 69 25 chr18 41413410 41413802 -45263746 - MLT1C LTR MaLR 0 467 59 227 338 77 39 chr18 41416764 41416943 -45260605 + MIR SINE MIR 40 234 -28 246 247 43 11 chr18 41417196 41417289 -45260259 + (TATATG)n Simple_repeat Simple_repeat 4 99 0 183 42 0 0 chr18 41417289 41417313 -45260235 + (CA)n Simple_repeat Simple_repeat 1 24 0 932 280 42 35 chr18 41417398 41417907 -45259641 - L1MB5 LINE L1 -306 5868 5356 24 67 0 0 chr18 41418338 41418383 -45259165 + AT_rich Low_complexity Low_complexity 1 45 0 26 74 0 0 chr18 41419552 41419606 -45257942 + AT_rich Low_complexity Low_complexity 1 54 0 183 231 38 0 chr18 41419614 41419774 -45257774 + (TA)n Simple_repeat Simple_repeat 1 166 0 245 212 41 0 chr18 41419813 41420144 -45257404 + (TA)n Simple_repeat Simple_repeat 1 344 0 341 222 23 0 chr18 41420163 41420334 -45257214 + (TA)n Simple_repeat Simple_repeat 2 176 0 408 291 15 15 chr18 41420439 41420573 -45256975 + MER94 DNA DNA 1 134 0 282 313 0 70 chr18 41422048 41422176 -45255372 - MIR SINE MIR -38 224 106 617 235 35 20 chr18 41423402 41423602 -45253946 + MER96B DNA MER1_type? 205 407 -10 484 273 8 8 chr18 41424883 41425004 -45252544 - LTR28 LTR ERV1 0 1020 900 1646 208 101 108 chr18 41425046 41425834 -45251714 - LTR1B LTR ERV1 -39 981 3 259 307 69 30 chr18 41426041 41426142 -45251406 - MIR SINE MIR -64 144 40 2708 209 83 42 chr18 41427092 41427986 -45249562 - MER63C DNA MER1_type 0 930 1 249 349 18 18 chr18 41428389 41428498 -45249050 + MER5B DNA MER1_type 4 112 -66 23 0 0 0 chr18 41428774 41428797 -45248751 + AT_rich Low_complexity Low_complexity 1 23 0 206 331 128 12 chr18 41428812 41428984 -45248564 - L3 LINE CR1 -1090 487 296 23 0 0 0 chr18 41429022 41429045 -45248503 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr18 41429081 41429109 -45248439 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr18 41429315 41429352 -45248196 + AT_rich Low_complexity Low_complexity 1 37 0 2323 99 0 3 chr18 41430712 41431024 -45246524 - AluSq SINE Alu -2 311 1 211 225 12 50 chr18 41431102 41431182 -45246366 + GA-rich Low_complexity Low_complexity 3 79 0 1321 318 25 34 chr18 41431243 41431771 -45245777 + L1ME2 LINE L1 2 524 -5546 1186 261 119 35 chr18 41431773 41432226 -45245322 + L1ME2 LINE L1 2336 2750 -3330 2136 81 0 0 chr18 41432226 41432498 -45245050 + AluY SINE Alu 3 274 -37 180 97 0 0 chr18 41432501 41432532 -45245016 + (TAAA)n Simple_repeat Simple_repeat 1 31 0 1186 261 119 35 chr18 41432532 41433010 -45244538 + L1ME2 LINE L1 2751 3349 -2731 2546 252 38 22 chr18 41433082 41433984 -45243564 + L1ME2 LINE L1 3855 4770 -1310 599 240 96 10 chr18 41433973 41434338 -45243210 + L1ME2 LINE L1 5067 5461 -635 * 483 252 82 6 chr18 41434353 41434530 -45243018 + L1ME2 LINE L1 5913 6100 0 557 295 26 0 chr18 41434718 41434874 -45242674 - MIR SINE MIR -4 258 99 547 207 69 101 chr18 41435399 41435587 -45241961 + MER5A DNA MER1_type 8 189 0 197 311 156 11 chr18 41435870 41435960 -45241588 + L2 LINE L2 3168 3270 -2 2049 124 17 0 chr18 41436317 41436615 -45240933 + AluSx SINE Alu 1 303 -9 26 64 0 0 chr18 41436712 41436759 -45240789 + AT_rich Low_complexity Low_complexity 1 47 0 2891 141 38 6 chr18 41437428 41437989 -45239559 - L1M2 LINE L1 -511 5789 5211 1269 174 17 0 chr18 41437988 41438218 -45239330 + L1MA6 LINE L1 5828 6061 -239 * 934 161 35 43 chr18 41438236 41438466 -45239082 + L1MB8 LINE L1 5951 6178 0 365 279 136 66 chr18 41438562 41438849 -45238699 - MLT1L LTR MaLR -108 507 201 201 39 0 0 chr18 41439512 41439538 -45238010 + (TG)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr18 41439802 41439823 -45237725 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr18 41440689 41440723 -45236825 + (CA)n Simple_repeat Simple_repeat 2 35 0 32 26 0 0 chr18 41440968 41441007 -45236541 + AT_rich Low_complexity Low_complexity 1 39 0 657 209 23 0 chr18 41441029 41441158 -45236390 + AluJo SINE Alu 3 134 -178 660 291 5 30 chr18 41442273 41442476 -45235072 - MIR SINE MIR -6 256 59 987 313 80 7 chr18 41442476 41442888 -45234660 - LTR16C LTR ERVL 0 491 50 2191 57 0 17 chr18 41445170 41445467 -45232081 - AluY SINE Alu -19 292 1 360 317 98 54 chr18 41446731 41447141 -45230407 - L1ME3A LINE L1 -237 5933 5506 316 333 96 25 chr18 41447282 41447590 -45229958 - L1ME3A LINE L1 -865 5281 4996 2409 74 0 3 chr18 41447590 41447902 -45229646 - AluY SINE Alu 0 311 1 316 333 96 25 chr18 41447902 41448539 -45229009 - L1ME3A LINE L1 -1150 4996 4269 27 62 0 0 chr18 41448651 41448699 -45228849 + AT_rich Low_complexity Low_complexity 1 48 0 5512 124 8 26 chr18 41449893 41450946 -45226602 + L1PA14 LINE L1 5036 6074 -87 2060 122 0 56 chr18 41450946 41451265 -45226283 + AluSg SINE Alu 1 301 -9 5512 124 8 26 chr18 41451265 41451348 -45226200 + L1PA14 LINE L1 6074 6157 -4 471 100 0 0 chr18 41451350 41451420 -45226128 + (TA)n Simple_repeat Simple_repeat 1 70 0 220 328 0 0 chr18 41451471 41451532 -45226016 + L2 LINE L2 3207 3267 -5 1416 269 27 27 chr18 41451734 41452181 -45225367 - MER31B LTR ERV1 -19 447 1 23 33 0 0 chr18 41454353 41454383 -45223165 + AT_rich Low_complexity Low_complexity 1 30 0 3105 164 16 50 chr18 41454620 41455254 -45222294 + LTR9 LTR ERV1 1 612 0 240 254 236 18 chr18 41455259 41455369 -45222179 - L2 LINE L2 0 3313 3180 467 277 145 6 chr18 41455384 41455543 -45222005 + MLT1J1 LTR MaLR 5 185 -261 1046 200 41 48 chr18 41455567 41455796 -45221752 - L1MA7 LINE L1 -10 6281 6053 390 91 0 0 chr18 41455796 41455851 -45221697 + (TCTA)n Simple_repeat Simple_repeat 4 58 0 1046 200 41 48 chr18 41455851 41455936 -45221612 - L1MA7 LINE L1 -238 6053 5969 277 255 0 0 chr18 41456026 41456077 -45221471 + MLT1J2 LTR MaLR 279 329 -121 21 36 0 0 chr18 41456372 41456400 -45221148 + AT_rich Low_complexity Low_complexity 1 28 0 691 201 15 0 chr18 41456895 41457029 -45220519 - LTR40a LTR ERVL 0 519 384 1031 290 24 19 chr18 41457036 41457457 -45220091 + L1ME1 LINE L1 5739 6161 -5 1211 233 0 56 chr18 41458936 41459241 -45218307 - AluJo SINE Alu -14 288 1 464 330 59 15 chr18 41459570 41459773 -45217775 - MLT1I LTR MaLR 0 409 198 2234 77 0 17 chr18 41459804 41460136 -45217412 - AluY SINE Alu 0 311 1 200 33 0 33 chr18 41462628 41462658 -45214890 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 189 175 0 0 chr18 41464063 41464103 -45213445 + GA-rich Low_complexity Low_complexity 2 41 0 237 109 0 0 chr18 41464388 41464434 -45213114 - LTR66 LTR ERVL -171 439 394 21 0 0 0 chr18 41464560 41464581 -45212967 + AT_rich Low_complexity Low_complexity 1 21 0 430 233 33 8 chr18 41467650 41467770 -45209778 - L1MC4a LINE L1 -1906 5902 5780 725 308 53 25 chr18 41468110 41468432 -45209116 + MER102b DNA MER1_type 1 331 -10 3717 171 49 38 chr18 41468472 41469246 -45208302 + LTR39 LTR ERV1 1 783 0 4827 185 25 30 chr18 41469372 41470011 -45207537 + L1MCa LINE L1 4 638 -5788 183 42 0 0 chr18 41470011 41470035 -45207513 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 4827 185 25 30 chr18 41470035 41470366 -45207182 + L1MCa LINE L1 638 969 -5457 2107 100 10 3 chr18 41471265 41471554 -45205994 - AluSx SINE Alu -21 291 1 225 167 0 0 chr18 41472323 41472365 -45205183 + C-rich Low_complexity Low_complexity 1 42 0 403 276 250 5 chr18 41472966 41473158 -45204390 + MIR SINE MIR 20 258 -4 219 287 64 64 chr18 41473502 41473596 -45203952 + MIR SINE MIR 89 182 -80 2103 121 3 16 chr18 41473941 41474248 -45203300 + AluSq SINE Alu 6 308 -5 2301 90 0 13 chr18 41475057 41475368 -45202180 - AluSg SINE Alu 0 310 4 1246 285 117 40 chr18 41475453 41475503 -45202045 - MER20B DNA MER1_type -66 717 672 2138 97 17 3 chr18 41475503 41475791 -45201757 - AluSg SINE Alu -18 292 1 1246 285 117 40 chr18 41475791 41476406 -45201142 - MER20B DNA MER1_type -111 672 1 24 0 0 0 chr18 41477736 41477760 -45199788 + AT_rich Low_complexity Low_complexity 1 24 0 462 321 75 0 chr18 41478140 41478299 -45199249 - MIR SINE MIR -39 223 53 1949 124 7 7 chr18 41479321 41479604 -45197944 - AluSp SINE Alu -20 293 11 334 267 23 23 chr18 41479785 41479871 -45197677 - MIR SINE MIR -102 106 21 485 379 75 11 chr18 41481608 41482054 -45195494 - L3 LINE CR1 -8 1569 1031 294 323 54 8 chr18 41482195 41482325 -45195223 + MIR SINE MIR 1 136 -126 474 223 45 134 chr18 41482532 41482734 -45194814 + MER5A DNA MER1_type 5 188 -1 619 293 30 20 chr18 41483021 41483219 -45194329 + MIR SINE MIR 37 236 -26 264 352 42 49 chr18 41483777 41483919 -45193629 + MIR3 SINE MIR 2 142 -66 34 24 0 0 chr18 41484899 41484940 -45192608 + AT_rich Low_complexity Low_complexity 1 41 0 1323 214 37 0 chr18 41486573 41486867 -45190681 - MER58B DNA MER1_type -11 330 26 28 0 0 0 chr18 41487179 41487207 -45190341 + AT_rich Low_complexity Low_complexity 1 28 0 203 270 0 16 chr18 41491864 41491927 -45185621 + CT-rich Low_complexity Low_complexity 2 63 0 301 343 133 23 chr18 41492167 41492564 -45184984 - L2 LINE L2 -337 2977 2537 507 211 73 32 chr18 41492963 41493086 -45184462 - MER58B DNA MER1_type -2 339 212 186 339 65 61 chr18 41495140 41495370 -45182178 - L2 LINE L2 -8 3305 3075 2139 127 6 13 chr18 41495444 41495758 -45181790 - AluSx SINE Alu 0 312 1 27 29 0 0 chr18 41496067 41496101 -45181447 + AT_rich Low_complexity Low_complexity 1 34 0 231 88 0 0 chr18 41497080 41497114 -45180434 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 373 66 33 0 chr18 41497793 41497854 -45179694 + (CA)n Simple_repeat Simple_repeat 1 63 0 203 308 56 71 chr18 41498065 41498263 -45179285 + L2 LINE L2 2550 2744 -570 21 0 0 0 chr18 41498390 41498411 -45179137 + AT_rich Low_complexity Low_complexity 1 21 0 197 331 83 30 chr18 41499471 41499640 -45177908 - MER5A DNA MER1_type -5 184 7 219 217 0 0 chr18 41500128 41500188 -45177360 + (CA)n Simple_repeat Simple_repeat 2 61 0 2330 247 94 23 chr18 41500437 41500725 -45176823 - L1ME1 LINE L1 -8 6158 5892 1869 123 27 31 chr18 41500725 41501017 -45176531 - AluSg SINE Alu -19 291 1 2330 247 94 23 chr18 41501017 41502009 -45175539 - L1ME1 LINE L1 -270 5896 4784 2443 85 3 0 chr18 41502009 41502314 -45175234 - AluY SINE Alu -5 306 1 603 314 6 0 chr18 41503076 41503235 -45174313 - MER45A DNA AcHobo -17 161 2 239 333 20 72 chr18 41503255 41503408 -45174140 - MIR SINE MIR -112 150 6 247 303 11 22 chr18 41503610 41503699 -45173849 + MER5A DNA MER1_type 27 114 -75 206 362 29 36 chr18 41503617 41503755 -45173793 - MER5A DNA MER1_type -22 167 31 * 29 0 0 0 chr18 41504207 41504236 -45173312 + AT_rich Low_complexity Low_complexity 1 29 0 2252 134 25 8 chr18 41505519 41505877 -45171671 + THE1B LTR MaLR 1 364 0 3678 103 38 0 chr18 41505994 41506528 -45171020 + MER41A LTR ERV1 1 554 0 306 221 115 41 chr18 41506647 41506769 -45170779 + MIR SINE MIR 116 246 -16 234 261 0 0 chr18 41507314 41507383 -45170165 + A-rich Low_complexity Low_complexity 1 69 0 734 220 50 40 chr18 41508019 41508219 -45169329 - MER115 DNA AcHobo -26 667 466 652 342 61 4 chr18 41508333 41508561 -45168987 - MER115 DNA AcHobo -441 252 12 221 387 46 31 chr18 41509493 41509687 -45167861 + L2 LINE L2 2897 3093 -179 277 254 0 0 chr18 41509950 41510005 -45167543 - MLT1L LTR MaLR -399 216 162 2410 63 7 0 chr18 41510021 41510320 -45167228 - AluY SINE Alu -10 301 1 1704 128 34 4 chr18 41510328 41510593 -45166955 - AluSx SINE Alu -39 273 1 1635 176 13 44 chr18 41510618 41510936 -45166612 + AluJo SINE Alu 1 308 -4 180 0 0 0 chr18 41511666 41511686 -45165862 + (CAA)n Simple_repeat Simple_repeat 2 21 0 183 80 0 0 chr18 41514114 41514139 -45163409 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 232 0 50 50 chr18 41514418 41514458 -45163090 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 361 354 19 0 chr18 41516057 41516215 -45161333 + MIR3 SINE MIR 48 208 0 451 289 0 18 chr18 41516326 41516440 -45161108 - MIR SINE MIR -63 145 34 1773 200 3 0 chr18 41516722 41517017 -45160531 + AluSx SINE Alu 1 296 -16 186 388 97 15 chr18 41517837 41517971 -45159577 + MIR3 SINE MIR 21 165 -43 22 0 0 0 chr18 41518007 41518029 -45159519 + AT_rich Low_complexity Low_complexity 1 22 0 360 273 61 8 chr18 41518031 41518163 -45159385 - MER103 DNA DNA -8 158 20 2631 103 3 13 chr18 41518303 41518682 -45158866 + THE1C LTR MaLR 1 375 0 1068 153 6 0 chr18 41518880 41519056 -45158492 + MSTA LTR MaLR 4 180 -248 1078 115 0 0 chr18 41519058 41519206 -45158342 + AluSg/x SINE Alu 161 308 -4 1288 161 25 4 chr18 41519209 41519445 -45158103 + MSTA LTR MaLR 188 428 0 858 260 24 5 chr18 41519534 41519742 -45157806 - MER20 DNA MER1_type 0 219 8 412 248 124 31 chr18 41520386 41520547 -45157001 - MIR SINE MIR -72 190 15 938 223 90 65 chr18 41520870 41521225 -45156323 - MLT1A1 LTR MaLR -1 364 1 1730 142 69 4 chr18 41521739 41522000 -45155548 + AluSx SINE Alu 3 280 -32 354 45 0 0 chr18 41522000 41522044 -45155504 + (GAAA)n Simple_repeat Simple_repeat 2 45 0 296 266 9 35 chr18 41522774 41522887 -45154661 + GA-rich Low_complexity Low_complexity 3 112 0 183 400 76 0 chr18 41522938 41523043 -45154505 + MIR SINE MIR 16 128 -80 945 307 97 3 chr18 41523201 41523553 -45153995 - MLT1I LTR MaLR -18 391 7 423 343 7 0 chr18 41523571 41523708 -45153840 + MIR SINE MIR 122 259 -3 231 233 22 67 chr18 41523751 41523841 -45153707 + L2 LINE L2 3228 3313 0 223 322 50 21 chr18 41524374 41524504 -45153044 + MIR SINE MIR 20 153 -62 211 116 47 23 chr18 41526063 41526106 -45151442 + T-rich Low_complexity Low_complexity 2 45 0 231 36 0 0 chr18 41526255 41526283 -45151265 + (TA)n Simple_repeat Simple_repeat 2 29 0 1919 142 39 0 chr18 41526283 41526564 -45150984 - AluSx SINE Alu -20 292 1 2475 84 0 0 chr18 41526802 41527113 -45150435 + AluY SINE Alu 1 311 0 2532 71 0 0 chr18 41527348 41527657 -45149891 + AluY SINE Alu 3 311 0 211 271 0 0 chr18 41527657 41527705 -45149843 + GA-rich Low_complexity Low_complexity 3 50 0 186 349 109 10 chr18 41527721 41527913 -45149635 - MIR SINE MIR -10 252 42 745 244 41 10 chr18 41527960 41528157 -45149391 - MER3 DNA MER1_type -4 205 3 4042 209 81 18 chr18 41531747 41532725 -45144823 - MER45B DNA AcHobo -1 1039 1 212 250 0 0 chr18 41532828 41532872 -45144676 - MIR SINE MIR -196 66 23 2405 179 65 42 chr18 41533004 41533596 -45143952 - MER21A LTR ERV1 0 931 228 1379 132 31 22 chr18 41533596 41533824 -45143724 - MER30 DNA MER1_type 0 230 1 2405 179 65 42 chr18 41533824 41533998 -45143550 - MER21A LTR ERV1 -703 228 60 1916 213 32 26 chr18 41534629 41535093 -45142455 + MLT1C LTR MaLR 1 467 0 202 118 29 0 chr18 41535767 41535801 -45141747 + (TG)n Simple_repeat Simple_repeat 1 35 0 387 0 0 0 chr18 41536147 41536190 -45141358 + (TG)n Simple_repeat Simple_repeat 2 44 0 321 316 7 22 chr18 41536820 41536956 -45140592 + GA-rich Low_complexity Low_complexity 3 136 0 236 306 9 36 chr18 41537764 41537875 -45139673 + GA-rich Low_complexity Low_complexity 4 111 0 1792 142 0 4 chr18 41538645 41538913 -45138635 + AluSx SINE Alu 4 270 -42 377 258 21 0 chr18 41538955 41539052 -45138496 + MLT1L LTR MaLR 45 143 -472 414 299 80 25 chr18 41539079 41539280 -45138268 + MLT1L LTR MaLR 228 439 -176 1499 156 73 14 chr18 41541572 41541860 -45135688 - MER7A DNA MER2_type 0 346 44 291 208 40 128 chr18 41542258 41542383 -45135165 - L2 LINE L2 0 3313 3200 376 259 93 0 chr18 41543350 41543458 -45134090 + MIR3 SINE MIR 52 169 -39 291 287 8 23 chr18 41543883 41544012 -45133536 + GA-rich Low_complexity Low_complexity 1 127 0 207 139 0 0 chr18 41544812 41544848 -45132700 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 1956 145 0 23 chr18 41549027 41549330 -45128218 - AluSx SINE Alu -16 296 1 875 277 27 12 chr18 41549616 41549872 -45127676 + MLT1C LTR MaLR 208 467 0 1381 185 27 40 chr18 41550758 41551055 -45126493 - AluJo SINE Alu -19 293 1 283 232 13 0 chr18 41552002 41552142 -45125406 + CT-rich Low_complexity Low_complexity 1 141 0 511 181 24 24 chr18 41552252 41552418 -45125130 + CT-rich Low_complexity Low_complexity 2 167 0 266 304 24 24 chr18 41552689 41552814 -45124734 + MIR3 SINE MIR 4 128 -80 284 261 0 14 chr18 41553149 41553218 -45124330 + GA-rich Low_complexity Low_complexity 5 72 0 21 0 0 0 chr18 41553558 41553579 -45123969 + AT_rich Low_complexity Low_complexity 1 21 0 277 207 0 122 chr18 41555676 41555758 -45121790 - MER5B DNA MER1_type 0 178 107 288 0 0 0 chr18 41555802 41555834 -45121714 + (TG)n Simple_repeat Simple_repeat 2 33 0 228 167 0 0 chr18 41555852 41555900 -45121648 + (TG)n Simple_repeat Simple_repeat 1 48 0 24 0 0 0 chr18 41556106 41556130 -45121418 + AT_rich Low_complexity Low_complexity 1 24 0 1438 194 38 0 chr18 41559055 41559318 -45118230 + AluJo SINE Alu 1 273 -39 36 82 0 0 chr18 41559366 41559451 -45118097 + AT_rich Low_complexity Low_complexity 1 85 0 1649 132 96 39 chr18 41561131 41561486 -45116062 - THE1C LTR MaLR 0 375 1 180 97 0 0 chr18 41562673 41562704 -45114844 + (TTA)n Simple_repeat Simple_repeat 3 33 0 41219 47 6 0 chr18 41562704 41568810 -45108738 - L1PA4 LINE L1 -18 6137 2 268 374 30 8 chr18 41568977 41569108 -45108440 - MIR SINE MIR -56 152 19 283 333 83 42 chr18 41570037 41570205 -45107343 - MIR3 SINE MIR -21 187 13 1669 225 0 0 chr18 41572121 41572428 -45105120 - AluJb SINE Alu -5 307 1 777 272 93 116 chr18 41573384 41573940 -45103608 + HAL1 LINE L1 826 1352 -1155 665 233 0 0 chr18 41573940 41574069 -45103479 + FLAM_A SINE Alu 1 129 -4 777 272 93 116 chr18 41574069 41574475 -45103073 + HAL1 LINE L1 1352 1766 -741 21 0 0 0 chr18 41574635 41574656 -45102892 + AT_rich Low_complexity Low_complexity 1 21 0 580 113 0 0 chr18 41575740 41575820 -45101728 + AluS SINE Alu 1 80 -233 284 250 70 70 chr18 41625822 41625994 -45051554 + MER74B LTR ERVL 450 621 -1 200 333 70 47 chr18 41626004 41626133 -45051415 + MIR SINE MIR 43 174 -88 22 88 0 0 chr18 41626137 41626194 -45051354 + AT_rich Low_complexity Low_complexity 1 57 0 210 273 61 0 chr18 41626200 41626266 -45051282 + MIR SINE MIR 193 262 0 222 206 0 0 chr18 41627234 41627302 -45050246 + (TAA)n Simple_repeat Simple_repeat 2 69 0 223 266 0 25 chr18 41627411 41627490 -45050058 + A-rich Low_complexity Low_complexity 2 78 0 22 35 0 0 chr18 41627490 41627519 -45050029 + AT_rich Low_complexity Low_complexity 1 29 0 3313 240 65 35 chr18 41628460 41629676 -45047872 + L1MB7 LINE L1 2278 3545 -2601 2404 53 3 0 chr18 41629676 41629980 -45047568 - AluY SINE Alu 0 306 2 3313 240 65 35 chr18 41629980 41630168 -45047380 + L1MB7 LINE L1 3545 3726 -2420 2156 201 25 2 chr18 41630172 41630571 -45046977 + MSTB LTR MaLR 19 426 0 1696 139 35 28 chr18 41630585 41630873 -45046675 + AluSc SINE Alu 3 292 -17 8261 188 53 15 chr18 41630873 41632455 -45045093 + MSTB-int LTR MaLR 8 1649 -2 2032 180 81 2 chr18 41632457 41632852 -45044696 + MSTB LTR MaLR 1 426 0 4386 242 71 26 chr18 41632852 41634285 -45043263 + L1MB7 LINE L1 3718 5234 -912 2386 81 0 0 chr18 41634285 41634583 -45042965 + AluY SINE Alu 1 298 -13 4386 242 71 26 chr18 41634583 41634761 -45042787 + L1MB7 LINE L1 5234 5402 -744 451 206 0 19 chr18 41634773 41634880 -45042668 + L1MB7 LINE L1 5367 5471 -713 804 198 103 35 chr18 41634880 41635112 -45042436 - MER76 LTR ERV 0 688 441 656 159 43 7 chr18 41635157 41635295 -45042253 - MER76 LTR ERV -518 170 28 400 113 0 0 chr18 41635296 41635381 -45042167 - AluS SINE Alu 0 316 232 2435 199 89 4 chr18 41635381 41635943 -45041605 + L1MB7 LINE L1 5567 6176 -8 187 330 110 31 chr18 41637241 41637532 -45040016 - L2 LINE L2 -616 2698 2289 481 268 73 81 chr18 41637850 41638235 -45039313 - L1MC4 LINE L1 -635 7407 7026 22 0 0 0 chr18 41638349 41638371 -45039177 + AT_rich Low_complexity Low_complexity 1 22 0 449 269 141 86 chr18 41638420 41638529 -45039019 - L1MC4 LINE L1 -1214 6781 6679 183 42 0 0 chr18 41638529 41638553 -45038995 + (CA)n Simple_repeat Simple_repeat 1 24 0 449 269 141 86 chr18 41638553 41638735 -45038813 - L1MC4 LINE L1 -1316 6679 6479 243 215 0 0 chr18 41638847 41638912 -45038636 + GA-rich Low_complexity Low_complexity 2 66 0 213 122 41 20 chr18 41642237 41642286 -45035262 + (CAAA)n Simple_repeat Simple_repeat 2 51 0 2197 85 0 7 chr18 41642287 41642568 -45034980 + AluY SINE Alu 1 279 -32 207 0 0 0 chr18 41642570 41642593 -45034955 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr18 41642772 41642794 -45034754 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr18 41642959 41642982 -45034566 + AT_rich Low_complexity Low_complexity 1 23 0 3897 212 22 22 chr18 41643164 41643977 -45033571 + MER21B LTR ERV1 1 813 -50 446 376 72 13 chr18 41645096 41645487 -45032061 - L2 LINE L2 -569 2745 2332 564 316 49 23 chr18 41645505 41645809 -45031739 + MLT1I LTR MaLR 85 396 -13 1444 227 42 61 chr18 41646100 41646572 -45030976 + MLT1C LTR MaLR 1 463 -4 337 185 8 34 chr18 41647011 41647130 -45030418 + GA-rich Low_complexity Low_complexity 1 116 0 207 114 0 0 chr18 41647397 41647432 -45030116 + (TAGA)n Simple_repeat Simple_repeat 2 36 0 2112 128 10 0 chr18 41647442 41647747 -45029801 + AluSx SINE Alu 1 308 -4 198 103 0 0 chr18 41647920 41647949 -45029599 + (TATAG)n Simple_repeat Simple_repeat 3 31 0 267 325 84 37 chr18 41648147 41648338 -45029210 - MIR SINE MIR -29 233 34 5276 156 82 16 chr18 41649918 41650094 -45027454 + Tigger3b DNA MER2_type 120 283 -2745 312 27 0 0 chr18 41650094 41650131 -45027417 + (TC)n Simple_repeat Simple_repeat 1 37 0 5276 156 82 16 chr18 41650131 41650996 -45026552 + Tigger3b DNA MER2_type 283 1230 -1 1568 226 43 6 chr18 41651304 41651654 -45025894 + MLT1A1 LTR MaLR 1 363 -2 915 195 32 59 chr18 41653642 41653869 -45023679 + MER33 DNA MER1_type 1 220 -2365 494 31 16 0 chr18 41653869 41653933 -45023615 + (TCTA)n Simple_repeat Simple_repeat 4 68 0 2091 112 3 3 chr18 41653933 41654219 -45023329 - AluSc SINE Alu -23 286 1 22 35 0 0 chr18 41654219 41654248 -45023300 + AT_rich Low_complexity Low_complexity 1 29 0 915 195 32 59 chr18 41654248 41654302 -45023246 + MER33 DNA MER1_type 217 291 -33 658 349 72 57 chr18 41654519 41655588 -45021960 + L2 LINE L2 2216 3312 -1 302 312 29 36 chr18 41656837 41656975 -45020573 - MIR3 SINE MIR -7 201 65 263 128 0 0 chr18 41657794 41657833 -45019715 - MLT1A1 LTR MaLR 0 365 327 276 200 0 0 chr18 41658071 41658151 -45019397 + (TA)n Simple_repeat Simple_repeat 1 80 0 1414 253 164 40 chr18 41658170 41658280 -45019268 - L1M4 LINE L1 -905 5241 5146 2426 77 0 3 chr18 41658280 41658592 -45018956 - AluY SINE Alu 0 311 1 1414 253 164 40 chr18 41658592 41659326 -45018222 - L1M4 LINE L1 -1000 5146 4292 22 70 0 0 chr18 41659602 41659645 -45017903 + AT_rich Low_complexity Low_complexity 1 43 0 200 57 0 57 chr18 41659987 41660022 -45017526 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 487 265 22 0 chr18 41666825 41666961 -45010587 + MER74A LTR ERVL 5 143 -415 379 258 43 0 chr18 41667124 41667287 -45010261 + (TA)n Simple_repeat Simple_repeat 1 170 0 226 297 17 34 chr18 41667230 41667405 -45010143 + (CATATA)n Simple_repeat Simple_repeat 2 173 0 * 410 224 59 0 chr18 41667381 41667551 -45009997 + (TA)n Simple_repeat Simple_repeat 1 180 0 1189 255 42 37 chr18 41667561 41668061 -45009487 + L1ME2 LINE L1 5592 6078 -86 4964 85 135 1 chr18 41668709 41669437 -45008111 - LTR12 LTR ERV1 -1 825 1 585 241 38 209 chr18 41669830 41670333 -45007215 + L2 LINE L2 2895 3311 -2 4750 162 32 36 chr18 41670869 41671845 -45005703 + L1MA9 LINE L1 5339 6310 -2 382 316 99 20 chr18 41672816 41673161 -45004387 - L1ME3 LINE L1 -280 5882 5511 1045 277 66 83 chr18 41673164 41673878 -45003670 + MER20B DNA MER1_type 1 702 -81 314 277 168 42 chr18 41674114 41674352 -45003196 - L1ME3 LINE L1 -747 5399 5132 23 68 0 0 chr18 41676671 41676715 -45000833 + AT_rich Low_complexity Low_complexity 1 44 0 30 69 0 0 chr18 41676775 41676833 -45000715 + AT_rich Low_complexity Low_complexity 1 58 0 211 106 64 0 chr18 41678329 41678376 -44999172 + (TA)n Simple_repeat Simple_repeat 2 51 0 386 212 56 66 chr18 41678416 41678614 -44998934 - MER5C DNA MER1_type -60 264 69 1491 201 10 24 chr18 41678637 41678947 -44998601 + MLT1A1 LTR MaLR 19 319 -46 182 266 298 0 chr18 41678983 41679077 -44998471 - L2 LINE L2 0 3313 3192 1220 204 80 22 chr18 41679168 41679442 -44998106 + AluJo SINE Alu 3 292 -10 383 280 0 0 chr18 41679567 41679660 -44997888 + MER5A DNA MER1_type 20 112 -77 760 301 0 0 chr18 41679691 41679864 -44997684 - MER5A DNA MER1_type -16 173 1 313 336 29 14 chr18 41679884 41680024 -44997524 + MER5A DNA MER1_type 26 167 -22 29 84 0 0 chr18 41681231 41681302 -44996246 + AT_rich Low_complexity Low_complexity 1 71 0 21 82 0 0 chr18 41681362 41681411 -44996137 + AT_rich Low_complexity Low_complexity 1 49 0 25 31 0 0 chr18 41681713 41681745 -44995803 + AT_rich Low_complexity Low_complexity 1 32 0 246 105 0 0 chr18 41681750 41681788 -44995760 + (TG)n Simple_repeat Simple_repeat 1 38 0 291 328 39 0 chr18 41683231 41683359 -44994189 + L1ME3A LINE L1 4475 4607 -1539 9519 47 6 0 chr18 41683359 41685306 -44992242 + L1PA5 LINE L1 4196 6147 -7 328 278 58 58 chr18 41685360 41685551 -44991997 - L2 LINE L2 -652 2662 2472 356 217 12 0 chr18 41685551 41685634 -44991914 + L1MB5 LINE L1 5806 5889 -285 234 0 0 0 chr18 41685754 41685780 -44991768 + (TTTTG)n Simple_repeat Simple_repeat 1 26 0 1241 191 30 4 chr18 41685802 41686056 -44991492 + L1MB5 LINE L1 5886 6142 -32 1286 161 8 79 chr18 41686056 41686323 -44991225 + AluJo SINE Alu 60 307 -5 229 329 20 34 chr18 41686682 41686831 -44990717 + L1ME3A LINE L1 4887 5033 -1113 806 293 70 30 chr18 41686874 41687243 -44990305 + MSTD LTR MaLR 1 384 -12 435 277 92 20 chr18 41687252 41687447 -44990101 + L1ME3A LINE L1 5078 5286 -860 656 303 74 34 chr18 41687506 41687981 -44989567 + L1ME3A LINE L1 5342 5835 -335 928 329 31 12 chr18 41688848 41689173 -44988375 - LTR16A LTR ERVL -13 437 107 24 85 0 0 chr18 41689532 41689591 -44987957 + AT_rich Low_complexity Low_complexity 1 59 0 187 294 20 0 chr18 41689750 41689801 -44987747 + L2 LINE L2 2985 3036 -277 453 242 0 11 chr18 41689898 41690006 -44987542 + MER39 LTR ERV1 4 110 -432 955 341 56 15 chr18 41690040 41690448 -44987100 + L2 LINE L2 2372 2796 -518 3329 158 38 31 chr18 41691371 41692011 -44985537 + LTR48B LTR ERV1 1 644 0 1489 194 60 43 chr18 41692013 41692363 -44985185 + LTR48B-int LTR ERV1 1 356 -5975 * 2163 194 10 38 chr18 41692337 41693133 -44984415 + LTR49-int LTR ERV1 361 1595 -3285 287 281 86 39 chr18 41694371 41694499 -44983049 - MIR3 SINE MIR -52 156 23 2039 134 7 0 chr18 41694970 41695269 -44982279 + AluSq SINE Alu 13 313 0 406 153 0 14 chr18 41695585 41695657 -44981891 - MLT1A1 LTR MaLR -294 71 1 264 294 59 29 chr18 41695950 41696052 -44981496 - MIR SINE MIR -64 144 40 375 345 110 62 chr18 41697330 41697829 -44979719 + L3 LINE CR1 76 598 -979 205 318 156 32 chr18 41697965 41698305 -44979243 + L3 LINE CR1 645 1026 -551 198 0 0 0 chr18 41698472 41698494 -44979054 + (A)n Simple_repeat Simple_repeat 1 22 0 4314 193 34 54 chr18 41698494 41699995 -44977553 + L1M4c LINE L1 1445 2914 -3468 2615 209 11 20 chr18 41699996 41700603 -44976945 + L1MB2 LINE L1 5561 6162 -9 21 89 0 0 chr18 41700612 41700668 -44976880 + AT_rich Low_complexity Low_complexity 1 56 0 388 255 90 110 chr18 41701661 41702061 -44975487 - L1ME4a LINE L1 -6 6115 5724 218 200 0 0 chr18 41702107 41702152 -44975396 + (CAGAGA)n Simple_repeat Simple_repeat 2 46 0 2202 191 102 6 chr18 41702169 41702677 -44974871 - MER89 LTR ERV1 -2 557 1 226 253 53 80 chr18 41702679 41702829 -44974719 + L1M4c LINE L1 2915 3060 -3322 24 0 0 0 chr18 41702983 41703007 -44974541 + AT_rich Low_complexity Low_complexity 1 24 0 344 218 23 23 chr18 41703016 41703103 -44974445 + L1M4c LINE L1 3180 3266 -3116 2170 228 98 60 chr18 41703191 41703321 -44974227 - L1MC4 LINE L1 -29 8013 7889 1934 158 7 0 chr18 41703321 41703631 -44973917 - AluSx SINE Alu 0 312 1 2170 228 98 60 chr18 41703631 41704436 -44973112 - L1MC4 LINE L1 -153 7889 7042 193 0 94 0 chr18 41704436 41704468 -44973080 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr18 41704632 41704654 -44972894 + AT_rich Low_complexity Low_complexity 1 22 0 2278 62 0 71 chr18 41704666 41704989 -44972559 - AluY SINE Alu -11 300 1 228 328 53 23 chr18 41705288 41705419 -44972129 - L2 LINE L2 -191 3081 2947 1680 105 0 39 chr18 41707049 41707354 -44970194 - AluSc SINE Alu -16 293 1 511 273 67 108 chr18 41707392 41707978 -44969570 + L1MCc LINE L1 677 1238 -4888 404 286 77 13 chr18 41707975 41708286 -44969262 + L1MCc LINE L1 1461 1791 -5034 * 258 81 0 0 chr18 41708336 41708373 -44969175 + (CA)n Simple_repeat Simple_repeat 1 37 0 963 114 23 0 chr18 41708823 41708955 -44968593 + AluSg SINE Alu 1 135 -175 554 250 87 69 chr18 41708987 41709435 -44968113 + L1MCc LINE L1 949 1404 -5138 306 0 0 0 chr18 41709438 41709472 -44968076 + (CA)n Simple_repeat Simple_repeat 1 34 0 362 268 26 20 chr18 41709472 41709625 -44967923 + L1MCc LINE L1 1453 1606 -4936 554 284 72 40 chr18 41709725 41710253 -44967295 + L1MCc LINE L1 1969 2456 -4188 26 50 0 0 chr18 41710347 41710387 -44967161 + AT_rich Low_complexity Low_complexity 1 40 0 1756 241 59 42 chr18 41710514 41711229 -44966319 + L1MB8 LINE L1 5295 6021 -157 1523 154 8 4 chr18 41712011 41712264 -44965284 - MER2 DNA MER2_type -90 255 2 1187 233 35 65 chr18 41712385 41712940 -44964608 + MER39 LTR ERV1 9 707 0 9384 226 59 19 chr18 41713331 41713467 -44964081 + L1MA9 LINE L1 3101 3230 -3877 199 53 26 26 chr18 41713467 41713505 -44964043 + (TA)n Simple_repeat Simple_repeat 1 38 0 9384 226 59 19 chr18 41713505 41715686 -44961862 + L1MA9 LINE L1 3230 5322 -1785 1805 117 47 33 chr18 41715686 41715986 -44961562 + AluSg SINE Alu 1 304 -6 396 0 0 0 chr18 41715988 41716032 -44961516 + (CA)n Simple_repeat Simple_repeat 2 45 0 9384 226 59 19 chr18 41716032 41717514 -44960034 + L1MA9 LINE L1 5322 7069 -38 188 238 16 0 chr18 41717959 41718022 -44959526 + T-rich Low_complexity Low_complexity 4 67 0 2426 206 31 19 chr18 41719312 41719899 -44957649 - L1MD3 LINE L1 -10 7985 7392 414 208 0 108 chr18 41719905 41720025 -44957523 - MLT1F1 LTR MaLR -460 107 1 262 179 30 15 chr18 41720026 41720093 -44957455 - L1MD3 LINE L1 -718 7277 7210 33 43 0 0 chr18 41720239 41720286 -44957262 + AT_rich Low_complexity Low_complexity 1 47 0 2979 198 38 2 chr18 41723663 41724301 -44953247 - L1MA6 LINE L1 0 6300 5640 729 119 17 25 chr18 41724327 41724445 -44953103 - AluSx SINE Alu -15 297 181 934 133 0 0 chr18 41724445 41724573 -44952975 - AluSx SINE Alu -183 130 3 1483 247 29 80 chr18 41724686 41725233 -44952315 - LTR40a LTR ERVL 0 519 1 229 307 33 73 chr18 41725519 41725669 -44951879 + MIR SINE MIR 80 223 -39 328 328 62 11 chr18 41726207 41726384 -44951164 + MIR SINE MIR 14 146 -62 216 0 0 0 chr18 41726460 41726484 -44951064 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2040 125 0 0 chr18 41726484 41726764 -44950784 - AluSx SINE Alu -32 280 1 2622 225 34 21 chr18 41726765 41727521 -44950027 - L1 LINE L1 -2390 3756 2991 186 381 0 0 chr18 41727625 41727688 -44949860 + L3 LINE CR1 1294 1356 -221 225 0 0 0 chr18 41727702 41727727 -44949821 + (TA)n Simple_repeat Simple_repeat 2 26 0 275 380 0 18 chr18 41727780 41727893 -44949655 + L3 LINE CR1 1457 1567 -10 28 0 0 0 chr18 41729091 41729119 -44948429 + AT_rich Low_complexity Low_complexity 1 28 0 6986 175 50 7 chr18 41729122 41730498 -44947050 + L1M4c LINE L1 21 1459 -4925 2042 157 0 0 chr18 41730498 41730810 -44946738 + AluSx SINE Alu 1 312 0 2222 172 10 24 chr18 41730944 41731361 -44946187 + MER61E LTR ERV1 121 779 0 660 204 20 26 chr18 41731361 41731510 -44946038 + LTR48B LTR ERV1 497 644 0 31 68 0 0 chr18 41731991 41732050 -44945498 + AT_rich Low_complexity Low_complexity 1 59 0 21 0 0 0 chr18 41732201 41732222 -44945326 + AT_rich Low_complexity Low_complexity 1 21 0 79 48 0 20 chr18 41732252 41732399 -44945149 + AT_rich Low_complexity Low_complexity 1 144 0 395 181 14 0 chr18 41732702 41732774 -44944774 + AluSq/x SINE Alu 46 118 -184 27 0 0 0 chr18 41732898 41732925 -44944623 + AT_rich Low_complexity Low_complexity 1 27 0 8233 200 60 67 chr18 41732982 41733458 -44944090 + LTR48B-int LTR ERV1 1986 2464 -3867 2057 139 3 0 chr18 41733458 41733761 -44943787 + AluSq SINE Alu 1 304 -9 8233 200 60 67 chr18 41733761 41736045 -44941503 + LTR48B-int LTR ERV1 2464 6150 -181 1776 203 20 30 chr18 41736164 41736563 -44940985 + LTR48B LTR ERV1 2 396 -248 213 333 33 11 chr18 41737018 41737108 -44940440 - MIR SINE MIR -70 138 47 180 0 0 0 chr18 41738067 41738087 -44939461 + (A)n Simple_repeat Simple_repeat 1 20 0 1927 171 117 5 chr18 41739016 41739401 -44938147 + MSTA LTR MaLR 1 428 0 301 178 22 28 chr18 41739785 41739874 -44937674 + LTR48B LTR ERV1 1 88 -534 * 2206 176 22 25 chr18 41739859 41740307 -44937241 + MER39 LTR ERV1 261 707 0 579 152 0 0 chr18 41742616 41742708 -44934840 + AluJ/FLAM SINE Alu 2 93 -219 569 270 0 34 chr18 41742708 41742856 -44934692 + MER58A DNA MER1_type 39 181 -43 189 305 31 55 chr18 41742892 41743020 -44934528 - L2 LINE L2 -474 2840 2716 2264 75 7 0 chr18 41743583 41743875 -44933673 - AluY SINE Alu -17 294 1 1913 157 3 0 chr18 41743925 41744224 -44933324 + AluSq SINE Alu 1 300 -13 1707 170 0 42 chr18 41745725 41746037 -44931511 + AluJb SINE Alu 1 299 -13 21 71 0 0 chr18 41746168 41746210 -44931338 + AT_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr18 41748037 41748058 -44929490 + AT_rich Low_complexity Low_complexity 1 21 0 432 221 35 76 chr18 41748275 41748447 -44929101 + MER58C DNA MER1_type 51 215 0 235 207 195 0 chr18 41749829 41749911 -44927637 + L1MC4 LINE L1 6601 6698 -1344 486 245 0 0 chr18 41749919 41750070 -44927478 + (TA)n Simple_repeat Simple_repeat 2 152 0 221 171 12 37 chr18 41750180 41750262 -44927286 + (TA)n Simple_repeat Simple_repeat 2 81 0 256 159 16 16 chr18 41750328 41750391 -44927157 + (TA)n Simple_repeat Simple_repeat 2 64 0 3392 107 66 0 chr18 41752711 41753255 -44924293 + LTR19B LTR ERV1 1 580 0 2001 191 62 0 chr18 41753948 41754351 -44923197 + MSTB1 LTR MaLR 1 428 -4 21 36 0 0 chr18 41754370 41754398 -44923150 + AT_rich Low_complexity Low_complexity 1 28 0 204 97 0 0 chr18 41754459 41754490 -44923058 + (TG)n Simple_repeat Simple_repeat 1 31 0 25 51 0 0 chr18 41754607 41754646 -44922902 + AT_rich Low_complexity Low_complexity 1 39 0 1467 214 25 75 chr18 41755264 41755346 -44922202 - Charlie1b DNA MER1_type -2307 454 369 642 174 8 8 chr18 41755346 41755478 -44922070 - FLAM_C SINE Alu -1 132 1 1467 214 25 75 chr18 41755478 41755596 -44921952 - Charlie1b DNA MER1_type -2392 369 247 1873 188 89 10 chr18 41755596 41755989 -44921559 - MSTA LTR MaLR -4 424 1 1467 214 25 75 chr18 41755989 41756264 -44921284 - Charlie1b DNA MER1_type -2514 247 2 24 32 0 0 chr18 41757097 41757128 -44920420 + AT_rich Low_complexity Low_complexity 1 31 0 403 57 0 0 chr18 41757140 41757193 -44920355 + AluY SINE Alu 84 136 -175 29459 44 38 2 chr18 41757193 41760959 -44916589 + L1P LINE L1 3 3903 -2243 1250 232 25 37 chr18 41761067 41761394 -44916154 + LTR49-int LTR ERV1 967 1289 -5042 403 225 22 99 chr18 41761563 41761745 -44915803 + LTR49-int LTR ERV1 1556 1723 -4608 1090 267 40 4 chr18 41761789 41762066 -44915482 + LTR49-int LTR ERV1 1814 2100 -4231 357 229 97 73 chr18 41762061 41762349 -44915199 + LTR57-int LTR ERVL 868 1162 -4181 * 1073 207 94 10 chr18 41762106 41762405 -44915143 + LTR49-int LTR ERV1 2949 3272 -3059 482 188 27 36 chr18 41762457 41762569 -44914979 + LTR49-int LTR ERV1 3264 3374 -2957 24 0 0 0 chr18 41762754 41762778 -44914770 + AT_rich Low_complexity Low_complexity 1 24 0 8758 33 5 1 chr18 41762998 41764833 -44912715 - L1PA2 LINE L1 -8 6147 4308 4704 255 53 27 chr18 41764957 41766205 -44911343 - L1PBb LINE L1 -3454 3395 2033 1977 120 14 7 chr18 41766205 41766535 -44911013 - AluSx SINE Alu 0 332 1 4704 255 53 27 chr18 41766535 41767253 -44910295 - L1PBb LINE L1 -4816 2033 1335 274 233 56 44 chr18 41767238 41767328 -44910220 - L1PBb LINE L1 -5286 1563 1473 * 458 332 89 43 chr18 41768285 41768589 -44908959 - L1PBb LINE L1 -6520 330 13 929 268 109 22 chr18 41769387 41770135 -44907413 + L1ME LINE L1 4640 5441 -729 229 260 0 26 chr18 41771156 41771233 -44906315 + (TAA)n Simple_repeat Simple_repeat 1 75 0 438 79 0 0 chr18 41771233 41771296 -44906252 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2265 110 0 0 chr18 41771308 41771607 -44905941 - AluSx SINE Alu -13 299 1 2098 113 3 3 chr18 41772770 41773070 -44904478 + AluSq SINE Alu 1 300 -13 416 246 187 12 chr18 41773123 41773294 -44904254 + MIR SINE MIR 32 232 -30 5578 155 51 57 chr18 41774781 41776019 -44901529 + Tigger3b DNA MER2_type 2 1231 0 331 321 67 0 chr18 41777596 41777761 -44899787 + L1ME LINE L1 5612 5787 -334 21 57 0 0 chr18 41777767 41777802 -44899746 + AT_rich Low_complexity Low_complexity 1 35 0 236 325 225 0 chr18 41777961 41778081 -44899467 + L2 LINE L2 3150 3296 -17 313 209 0 15 chr18 41778438 41778505 -44899043 + MIR SINE MIR 89 154 -108 2270 242 68 17 chr18 41778972 41779721 -44897827 - L1ME1 LINE L1 -30 6136 5350 230 271 0 0 chr18 41780179 41780227 -44897321 - L2 LINE L2 -15 3298 3251 447 311 122 0 chr18 41781937 41782085 -44895463 - MIR3 SINE MIR -6 202 37 290 228 13 13 chr18 41782598 41782677 -44894871 - MLT1A1 LTR MaLR 0 365 287 31 44 0 0 chr18 41782677 41782722 -44894826 + AT_rich Low_complexity Low_complexity 1 45 0 2513 274 75 37 chr18 41783044 41784104 -44893444 + L1ME1 LINE L1 35 1135 -5261 2400 274 78 14 chr18 41784102 41784329 -44893219 + L1ME1 LINE L1 3593 3804 -2411 * 1861 160 144 5 chr18 41784329 41784703 -44892845 + MSTA LTR MaLR 3 428 0 2400 274 78 14 chr18 41784703 41785429 -44892119 + L1ME1 LINE L1 3804 4607 -1608 2041 132 10 6 chr18 41785452 41785763 -44891785 - AluSx SINE Alu 0 312 1 1686 243 51 43 chr18 41785766 41786563 -44890985 + L1ME1 LINE L1 5138 5939 -296 1246 171 30 30 chr18 41786606 41786840 -44890708 + AluJb SINE Alu 3 236 -76 219 36 0 0 chr18 41786862 41786890 -44890658 + (TTA)n Simple_repeat Simple_repeat 3 30 0 7524 25 0 0 chr18 41786890 41788319 -44889229 - L1PA3 LINE L1 -18 6137 4706 1512 39 0 0 chr18 41788319 41788499 -44889049 + L1PA3 LINE L1 4516 4695 -1451 357 257 0 0 chr18 41788499 41788691 -44888857 + AluJb SINE Alu 226 417 0 518 282 100 18 chr18 41788695 41788915 -44888633 + L1ME1 LINE L1 5998 6235 0 1044 261 81 29 chr18 41791043 41791522 -44886026 - MLT1D LTR MaLR -1 504 1 360 330 89 25 chr18 41791551 41791754 -44885794 + MIR SINE MIR 5 220 -42 9095 210 74 75 chr18 41792041 41793966 -44883582 - L1MB3 LINE L1 0 7204 5278 3340 72 0 0 chr18 41793966 41794398 -44883150 - L1PA6 LINE L1 -1 6153 5722 9095 210 74 75 chr18 41794398 41794766 -44882782 - L1MB3 LINE L1 -1926 5278 4911 2130 182 9 46 chr18 41794766 41795205 -44882343 + MSTB LTR MaLR 4 426 0 9095 210 74 75 chr18 41795205 41797578 -44879970 - L1MB3 LINE L1 -2293 4911 2217 1266 238 37 52 chr18 41797578 41797927 -44879621 - MER2 DNA MER2_type -1 344 1 9095 210 74 75 chr18 41797927 41799339 -44878209 - L1MB3 LINE L1 -4987 2217 804 183 100 0 0 chr18 41799559 41799589 -44877959 + (TC)n Simple_repeat Simple_repeat 1 30 0 279 0 0 0 chr18 41799589 41799620 -44877928 + (TG)n Simple_repeat Simple_repeat 1 31 0 709 183 43 111 chr18 41799747 41799982 -44877566 - MER20 DNA MER1_type 0 219 1 25 51 0 0 chr18 41800145 41800184 -44877364 + AT_rich Low_complexity Low_complexity 1 39 0 259 145 29 0 chr18 41800472 41800541 -44877007 + (TA)n Simple_repeat Simple_repeat 2 72 0 24 53 0 0 chr18 41801107 41801145 -44876403 + AT_rich Low_complexity Low_complexity 1 38 0 21 0 0 0 chr18 41801409 41801430 -44876118 + AT_rich Low_complexity Low_complexity 1 21 0 2216 113 0 0 chr18 41801453 41801754 -44875794 + AluSg SINE Alu 1 301 -9 1318 213 65 52 chr18 41801755 41801876 -44875672 - MLT1C LTR MaLR -59 408 290 2614 105 11 5 chr18 41801876 41802249 -44875299 - THE1C LTR MaLR 0 375 1 1318 213 65 52 chr18 41802249 41802530 -44875018 - MLT1C LTR MaLR -177 290 1 1074 287 120 13 chr18 41802867 41803644 -44873904 + L1M4 LINE L1 2806 3665 -2481 * 4194 222 25 16 chr18 41803642 41804652 -44872896 - L1 LINE L1 -1920 5247 4229 1810 237 18 35 chr18 41804687 41805176 -44872372 - L1 LINE L1 -4951 2217 1737 1244 337 57 35 chr18 41805237 41806015 -44871533 - L1MB3 LINE L1 -6372 796 2 246 254 32 16 chr18 41808173 41808236 -44869312 - MIR SINE MIR 0 262 199 416 232 216 0 chr18 41808543 41808668 -44868880 - MIR SINE MIR -66 196 45 210 277 36 89 chr18 41808765 41808877 -44868671 + MIR3 SINE MIR 98 203 -5 412 279 93 25 chr18 41809045 41809282 -44868266 + L1ME4a LINE L1 5710 5962 -159 411 286 54 7 chr18 41810471 41810618 -44866930 + L2 LINE L2 3155 3308 -5 405 0 0 0 chr18 41811427 41811472 -44866076 + (TG)n Simple_repeat Simple_repeat 1 45 0 191 356 46 11 chr18 41811502 41811589 -44865959 + L3b LINE CR1 1465 1554 -29 22 35 0 0 chr18 41812841 41812870 -44864678 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18 41813449 41813470 -44864078 + AT_rich Low_complexity Low_complexity 1 21 0 277 335 89 19 chr18 41815283 41815441 -44862107 + MIR SINE MIR 46 214 -48 249 375 23 0 chr18 41815546 41815674 -44861874 - MIR SINE MIR -31 231 101 2252 104 45 0 chr18 41817019 41817376 -44860172 - L1MA1 LINE L1 -9 6293 5921 398 312 147 13 chr18 41817380 41817537 -44860011 + L2 LINE L2 2180 2357 -957 1806 127 0 8 chr18 41817541 41817808 -44859740 + AluSg1 SINE Alu 40 304 -5 24 0 0 0 chr18 41818673 41818697 -44858851 + AT_rich Low_complexity Low_complexity 1 24 0 186 280 0 20 chr18 41819956 41820006 -44857542 + L2 LINE L2 3261 3309 -4 223 176 0 59 chr18 41820521 41820572 -44856976 - L2 LINE L2 -93 3220 3173 21 0 0 0 chr18 41821038 41821059 -44856489 + AT_rich Low_complexity Low_complexity 1 21 0 213 156 44 0 chr18 41824801 41824846 -44852702 + GA-rich Low_complexity Low_complexity 1 47 0 872 269 9 22 chr18 41824967 41825194 -44852354 - MER58A DNA MER1_type 0 224 1 357 127 127 0 chr18 41825646 41825717 -44851831 - MADE1 DNA Mariner 0 80 1 276 149 0 0 chr18 41825796 41825843 -44851705 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 7114 42 15 0 chr18 41825845 41827206 -44850342 - L1PA6 LINE L1 0 6154 4785 339 25 0 0 chr18 41828413 41828453 -44849095 + (CA)n Simple_repeat Simple_repeat 1 40 0 413 300 74 39 chr18 41828916 41829173 -44848375 + MLT1L LTR MaLR 3 268 -347 360 154 15 15 chr18 41829174 41829239 -44848309 - MIR SINE MIR -161 101 37 432 265 173 0 chr18 41829735 41829855 -44847693 + MER3 DNA MER1_type 2 158 -51 180 0 0 0 chr18 41829855 41829875 -44847673 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 432 265 173 0 chr18 41829875 41829916 -44847632 + MER3 DNA MER1_type 158 191 -18 288 307 70 0 chr18 41830744 41830858 -44846690 + MIR SINE MIR 21 142 -66 2019 207 17 82 chr18 41830987 41831524 -44846024 + MLT2B2 LTR ERVL 3 504 -11 1996 123 4 0 chr18 41832236 41832548 -44845000 - AluSc SINE Alu 0 313 1 21 0 0 0 chr18 41833240 41833261 -44844287 + AT_rich Low_complexity Low_complexity 1 21 0 2626 30 3 0 chr18 41833410 41833712 -44843836 - AluY SINE Alu -8 303 1 244 359 26 32 chr18 41833760 41833916 -44843632 + MIR SINE MIR 13 167 -95 297 0 0 0 chr18 41834128 41834161 -44843387 + (CCAA)n Simple_repeat Simple_repeat 2 34 0 1443 209 30 23 chr18 41835082 41835383 -44842165 - AluJo SINE Alu -9 303 1 23 0 0 0 chr18 41838091 41838114 -44839434 + AT_rich Low_complexity Low_complexity 1 23 0 187 339 18 18 chr18 41838469 41838525 -44839023 + MIR SINE MIR 17 72 -136 189 74 0 0 chr18 41838837 41838864 -44838684 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 315 65 0 0 chr18 41838985 41839031 -44838517 + (CA)n Simple_repeat Simple_repeat 1 46 0 320 62 62 0 chr18 41839179 41839243 -44838305 + (TA)n Simple_repeat Simple_repeat 1 68 0 180 0 0 0 chr18 41840983 41841003 -44836545 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 203 341 126 30 chr18 41841489 41841624 -44835924 - L3 LINE CR1 -1 1576 1429 1513 199 16 29 chr18 41842297 41842608 -44834940 + AluJo SINE Alu 5 311 -1 1023 85 0 0 chr18 41842759 41842889 -44834659 - AluY SINE Alu -151 160 31 335 284 0 0 chr18 41842892 41842980 -44834568 + LTR16C LTR ERVL 373 460 -31 186 204 19 37 chr18 41843211 41843265 -44834283 - MIR SINE MIR -40 222 170 414 288 119 23 chr18 41843304 41843481 -44834067 + MIR3 SINE MIR 4 197 -11 218 380 14 0 chr18 41843518 41843589 -44833959 - MIR SINE MIR -99 109 38 216 335 82 6 chr18 41843675 41843845 -44833703 - MIR SINE MIR -60 202 20 504 306 6 6 chr18 41844655 41844815 -44832733 - MIR SINE MIR -13 249 90 252 86 0 0 chr18 41845874 41845909 -44831639 + (A)n Simple_repeat Simple_repeat 1 35 0 257 379 0 9 chr18 41846099 41846215 -44831333 + MIR3 SINE MIR 92 206 -2 345 163 0 23 chr18 41847000 41847245 -44830303 + AluJo SINE Alu 2 302 0 1446 235 33 60 chr18 41847664 41848183 -44829365 + MLT1D LTR MaLR 1 505 0 27 29 0 0 chr18 41848222 41848256 -44829292 + AT_rich Low_complexity Low_complexity 1 34 0 3618 210 27 26 chr18 41849319 41850355 -44827193 + L1MB4 LINE L1 4366 5402 -744 3105 205 46 4 chr18 41850362 41851055 -44826493 + L1MB4 LINE L1 5458 6179 -1 43 20 0 0 chr18 41851230 41851280 -44826268 + AT_rich Low_complexity Low_complexity 1 50 0 192 218 128 39 chr18 41853197 41853275 -44824273 - L2 LINE L2 0 3272 3188 212 184 0 0 chr18 41854619 41854657 -44822891 + A-rich Low_complexity Low_complexity 1 38 0 1883 111 8 0 chr18 41855794 41856055 -44821493 - AluSg SINE Alu -3 307 45 414 0 0 0 chr18 41856303 41856349 -44821199 + (TA)n Simple_repeat Simple_repeat 2 47 0 1943 129 7 7 chr18 41857557 41857852 -44819696 - AluSx SINE Alu -17 295 1 190 253 89 25 chr18 41857892 41857971 -44819577 - MIR SINE MIR -56 206 123 999 240 0 18 chr18 41858299 41858528 -44819020 + AluJo SINE Alu 64 288 -24 319 287 74 25 chr18 41858531 41858653 -44818895 - MIR SINE MIR -125 137 10 357 319 151 16 chr18 41858671 41858856 -44818692 - MIR SINE MIR -49 213 4 819 316 28 25 chr18 41860141 41860499 -44817049 + LTR16C LTR ERVL 2 360 -131 605 158 0 17 chr18 41860504 41860624 -44816924 - AluY SINE Alu -8 303 186 1353 209 23 0 chr18 41860724 41860983 -44816565 - AluJo SINE Alu -36 276 12 287 206 14 41 chr18 41862613 41862686 -44814862 + MIR SINE MIR 70 140 -122 2210 103 0 35 chr18 41862700 41863011 -44814537 + AluSg SINE Alu 1 300 -10 460 286 43 48 chr18 41863053 41863263 -44814285 - MER21B LTR ERV1 -144 719 511 2023 171 30 9 chr18 41863423 41863849 -44813699 + LTR23 LTR ERV1 1 435 -2 923 148 7 0 chr18 41865730 41865879 -44811669 + MSTB1 LTR MaLR 283 432 0 220 353 48 24 chr18 41865897 41866064 -44811484 - MIR SINE MIR -26 236 66 573 194 40 0 chr18 41866088 41866212 -44811336 - L1M4 LINE L1 -1326 4820 4692 479 286 124 19 chr18 41866502 41866712 -44810836 + MIR SINE MIR 21 252 -10 341 341 159 33 chr18 41867122 41867632 -44809916 + L2 LINE L2 2189 2633 -639 3502 159 24 0 chr18 41867632 41868253 -44809295 - L1MC1 LINE L1 -16 6317 5682 341 341 159 33 chr18 41868253 41868395 -44809153 + L2 LINE L2 2633 2756 -516 210 71 0 0 chr18 41868395 41868423 -44809125 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 341 341 159 33 chr18 41868423 41868691 -44808857 + L2 LINE L2 2756 3230 -42 228 233 44 0 chr18 41871394 41871484 -44806064 + A-rich Low_complexity Low_complexity 3 96 0 23 0 0 0 chr18 41872148 41872171 -44805377 + AT_rich Low_complexity Low_complexity 1 23 0 2152 106 0 0 chr18 41872226 41872536 -44805012 - AluSq SINE Alu 0 310 1 2105 117 3 0 chr18 41873800 41874098 -44803450 - AluSg SINE Alu -11 299 1 1573 241 107 57 chr18 41874195 41874756 -44802792 + MLT1E LTR MaLR 4 592 -1 192 77 0 0 chr18 41875616 41875642 -44801906 + (CCA)n Simple_repeat Simple_repeat 1 26 0 259 250 0 16 chr18 41876479 41876543 -44801005 + T-rich Low_complexity Low_complexity 2 64 0 24 53 0 0 chr18 41877516 41877554 -44799994 + AT_rich Low_complexity Low_complexity 1 38 0 236 290 97 0 chr18 41878234 41878327 -44799221 + MIR SINE MIR 49 150 -112 466 327 90 9 chr18 41878362 41878585 -44798963 - MIR SINE MIR -1 261 21 347 332 58 21 chr18 41878718 41878908 -44798640 - L3 LINE CR1 -245 1332 1136 285 360 104 12 chr18 41880028 41880192 -44797356 + MIR3 SINE MIR 26 204 -4 280 300 33 22 chr18 41881126 41881216 -44796332 + MIR SINE MIR 1 91 -171 2182 216 35 33 chr18 41881557 41881922 -44795626 - MLT2B1 LTR ERVL 0 520 152 1860 129 30 14 chr18 41881922 41882217 -44795331 - AluY SINE Alu -11 300 1 2182 216 35 33 chr18 41882217 41882370 -44795178 - MLT2B1 LTR ERVL -368 152 1 252 355 101 7 chr18 41882471 41882609 -44794939 - MIR3 SINE MIR -45 163 13 438 341 0 6 chr18 41882790 41882966 -44794582 + (CA)n Simple_repeat Simple_repeat 2 176 0 313 257 74 47 chr18 41885002 41885150 -44792398 - MIR SINE MIR -46 216 65 783 142 8 8 chr18 41886984 41887111 -44790437 + FLAM_C SINE Alu 7 133 -10 199 77 26 26 chr18 41888027 41888066 -44789482 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2388 70 0 0 chr18 41888904 41889202 -44788346 - AluY SINE Alu -13 298 1 319 357 58 0 chr18 41889208 41889379 -44788169 + MIR SINE MIR 46 226 -36 22 56 0 0 chr18 41889820 41889856 -44787692 + AT_rich Low_complexity Low_complexity 1 36 0 2243 104 0 3 chr18 41891570 41891869 -44785679 - AluSc SINE Alu -11 298 1 443 293 86 6 chr18 41892155 41892329 -44785219 + L1MC/D LINE L1 5600 5787 -2021 22 70 0 0 chr18 41897742 41897785 -44779763 + AT_rich Low_complexity Low_complexity 1 43 0 24 0 0 0 chr18 41897950 41897974 -44779574 + AT_rich Low_complexity Low_complexity 1 24 0 1982 121 52 50 chr18 41898700 41899063 -44778485 + THE1B LTR MaLR 1 364 0 24 0 0 0 chr18 41899250 41899274 -44778274 + AT_rich Low_complexity Low_complexity 1 24 0 200 324 59 0 chr18 41899533 41899601 -44777947 - MIR SINE MIR -74 188 117 190 321 85 38 chr18 41900579 41900685 -44776863 - L3b LINE CR1 -6 1577 1467 1392 180 41 95 chr18 41901747 41901778 -44775770 + MLT1B LTR MaLR 1 32 -358 225 0 0 0 chr18 41901778 41901803 -44775745 + (CA)n Simple_repeat Simple_repeat 2 26 0 1392 180 41 95 chr18 41901803 41901814 -44775734 + MLT1B LTR MaLR 32 42 -348 480 35 0 0 chr18 41901814 41901872 -44775676 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 1392 180 41 95 chr18 41901872 41902240 -44775308 + MLT1B LTR MaLR 42 390 0 23 0 0 0 chr18 41902246 41902269 -44775279 + AT_rich Low_complexity Low_complexity 1 23 0 269 179 18 0 chr18 41902969 41903025 -44774523 - LTR16C LTR ERVL 0 491 435 239 293 20 40 chr18 41903619 41903718 -44773830 - L1ME3A LINE L1 -91 6079 5983 283 289 10 29 chr18 41903919 41904023 -44773525 - L1ME3A LINE L1 -403 5767 5666 299 258 39 8 chr18 41904122 41904250 -44773298 - L1ME3A LINE L1 -727 5435 5304 349 275 88 88 chr18 41904297 41904559 -44772989 - L1ME3A LINE L1 -905 5241 4980 258 156 0 0 chr18 41905013 41905058 -44772490 + (CA)n Simple_repeat Simple_repeat 2 46 0 237 108 0 0 chr18 41905381 41905418 -44772130 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 453 19 0 0 chr18 41906110 41906164 -44771384 + (CA)n Simple_repeat Simple_repeat 2 55 0 185 304 0 0 chr18 41906895 41906941 -44770607 + L2 LINE L2 3248 3293 -20 204 40 0 0 chr18 41906949 41906974 -44770574 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 555 291 40 12 chr18 41909531 41909778 -44767770 + L1MB8 LINE L1 5925 6178 0 44 70 0 0 chr18 41910135 41910221 -44767327 + AT_rich Low_complexity Low_complexity 1 86 0 31 44 0 0 chr18 41910682 41910727 -44766821 + AT_rich Low_complexity Low_complexity 1 45 0 411 275 174 0 chr18 41911356 41911505 -44766043 - LTR33 LTR ERVL -253 268 94 184 352 0 0 chr18 41912182 41912236 -44765312 - MIR SINE MIR -18 244 191 213 365 112 13 chr18 41912426 41912659 -44764889 - L2 LINE L2 -347 2967 2712 268 339 83 18 chr18 41912725 41912943 -44764605 + L2 LINE L2 2119 2350 -964 1095 311 170 16 chr18 41914878 41915804 -44761744 - L2 LINE L2 -2 3311 2235 1524 226 81 17 chr18 41915814 41916222 -44761326 + MLT1C LTR MaLR 6 439 -28 976 292 44 32 chr18 41916250 41916338 -44761210 - L2 LINE L2 -1080 2234 2149 2088 126 0 16 chr18 41916338 41916668 -44760880 + AluSx SINE Alu 2 312 0 976 292 44 32 chr18 41916668 41916921 -44760627 - L2 LINE L2 -1165 2149 1889 223 344 31 55 chr18 41918105 41918233 -44759315 + MER5B DNA MER1_type 2 126 -52 242 54 0 27 chr18 41919052 41919089 -44758459 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 561 30 0 0 chr18 41920135 41920202 -44757346 + (CA)n Simple_repeat Simple_repeat 2 68 0 1138 193 46 132 chr18 41920700 41921094 -44756454 - MLT1A2 LTR MaLR -11 363 4 294 229 106 24 chr18 41921959 41922129 -44755419 - L1MEc LINE L1 -3645 2570 2387 370 267 107 57 chr18 41922132 41922394 -44755154 - L1MEc LINE L1 -4002 2394 2120 2214 188 20 11 chr18 41923191 41923632 -44753916 + MER65A LTR ERV1 1 445 0 824 277 86 26 chr18 41923635 41923680 -44753868 + L1MEc LINE L1 2051 2092 -4123 267 31 0 0 chr18 41923680 41923712 -44753836 + (TG)n Simple_repeat Simple_repeat 2 33 0 824 277 86 26 chr18 41923712 41924293 -44753255 + L1MEc LINE L1 2092 2669 -3546 842 278 160 13 chr18 41924329 41925111 -44752437 + L1MEc LINE L1 2816 3712 -2503 4425 149 24 22 chr18 41925122 41925808 -44751740 - L1PA16 LINE L1 0 6166 5476 1556 208 3 0 chr18 41925808 41926101 -44751447 + AluJo SINE Alu 1 294 -18 4425 149 24 22 chr18 41926101 41926200 -44751348 - L1PA16 LINE L1 -690 5476 5379 189 169 31 15 chr18 41926242 41926307 -44751241 + GA-rich Low_complexity Low_complexity 4 69 0 962 255 68 56 chr18 41926308 41926806 -44750742 + L1MEc LINE L1 3753 4256 -1959 347 327 122 24 chr18 41926820 41927025 -44750523 - L1MEc LINE L1 -5354 851 627 2975 111 15 7 chr18 41927259 41927719 -44749829 - L1MA5A LINE L1 -5 6292 5829 30 27 0 0 chr18 41928092 41928129 -44749419 + AT_rich Low_complexity Low_complexity 1 37 0 1253 190 101 19 chr18 41928654 41928970 -44748578 - MER2 DNA MER2_type -2 342 1 22 35 0 0 chr18 41929900 41929929 -44747619 + AT_rich Low_complexity Low_complexity 1 29 0 460 183 75 26 chr18 41931693 41931835 -44745713 - MIR SINE MIR -63 145 21 245 51 26 0 chr18 41932257 41932296 -44745252 + (TG)n Simple_repeat Simple_repeat 2 41 0 860 148 0 7 chr18 41933783 41933918 -44743630 - AluJo SINE Alu -178 134 1 26 0 0 0 chr18 41933971 41933997 -44743551 + AT_rich Low_complexity Low_complexity 1 26 0 2150 128 0 0 chr18 41934031 41934343 -44743205 + AluSx SINE Alu 1 312 0 290 229 16 0 chr18 41934679 41934740 -44742808 + U7 snRNA snRNA 2 63 0 213 39 0 0 chr18 41934754 41934780 -44742768 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 328 348 133 0 chr18 41936743 41936924 -44740624 + MIR SINE MIR 9 213 -49 239 323 61 40 chr18 41936934 41937033 -44740515 - L2 LINE L2 -5 3308 3208 21 95 0 0 chr18 41937076 41937139 -44740409 + AT_rich Low_complexity Low_complexity 1 63 0 409 160 0 21 chr18 41937245 41937339 -44740209 + GA-rich Low_complexity Low_complexity 3 94 0 23 101 0 0 chr18 41938392 41938471 -44739077 + AT_rich Low_complexity Low_complexity 1 79 0 1791 143 18 3 chr18 41938489 41938775 -44738773 - AluJb SINE Alu -18 294 5 70 54 0 0 chr18 41938775 41938887 -44738661 + AT_rich Low_complexity Low_complexity 1 112 0 760 53 0 0 chr18 41939605 41939700 -44737848 - AluY SINE Alu -10 301 207 1844 157 40 27 chr18 41939935 41940305 -44737243 + THE1C LTR MaLR 1 375 0 450 309 105 45 chr18 41940999 41941419 -44736129 + L1ME4a LINE L1 3846 4312 -1834 248 298 53 44 chr18 41941684 41941798 -44735750 + L1ME4a LINE L1 4669 4783 -1363 1011 248 102 7 chr18 41941819 41942114 -44735434 + MER58B DNA MER1_type 4 326 -15 210 131 66 16 chr18 41942135 41942196 -44735352 + (TA)n Simple_repeat Simple_repeat 2 65 0 25 31 0 0 chr18 41942458 41942490 -44735058 + AT_rich Low_complexity Low_complexity 1 32 0 180 0 0 0 chr18 41942642 41942662 -44734886 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 373 321 154 28 chr18 41942662 41943051 -44734497 + L1ME4a LINE L1 5390 5827 -294 21 0 0 0 chr18 41943651 41943672 -44733876 + AT_rich Low_complexity Low_complexity 1 21 0 264 185 0 0 chr18 41943679 41943733 -44733815 + CT-rich Low_complexity Low_complexity 2 55 0 311 319 83 25 chr18 41945200 41945385 -44732163 - L1ME4a LINE L1 -6 6115 5942 1724 153 33 0 chr18 41945385 41945660 -44731888 + AluSq SINE Alu 30 313 0 311 319 83 25 chr18 41945660 41945919 -44731629 - L1ME4a LINE L1 -179 5942 5645 30 45 0 0 chr18 41946287 41946331 -44731217 + AT_rich Low_complexity Low_complexity 1 44 0 1673 170 0 21 chr18 41947913 41948202 -44729346 - AluJo SINE Alu -25 287 5 27 62 0 0 chr18 41948979 41949027 -44728521 + AT_rich Low_complexity Low_complexity 1 48 0 320 381 98 12 chr18 41950227 41950471 -44727077 + L2 LINE L2 2493 2757 -557 190 336 193 8 chr18 41950591 41950710 -44726838 + L2 LINE L2 2909 3049 -264 280 77 39 0 chr18 41950858 41950910 -44726638 + (TA)n Simple_repeat Simple_repeat 1 54 0 351 288 33 93 chr18 41950972 41951187 -44726361 + L2 LINE L2 3112 3313 0 293 281 21 42 chr18 41951592 41951688 -44725860 + MIR SINE MIR 16 109 -153 835 274 14 0 chr18 41952394 41952613 -44724935 - MER58A DNA MER1_type 0 224 3 321 322 167 24 chr18 41954208 41954543 -44723005 + L3 LINE CR1 1121 1503 -74 207 0 0 0 chr18 41954617 41954640 -44722908 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 234 343 0 36 chr18 41954996 41955133 -44722415 + MLT1K LTR MaLR 392 523 -65 35 24 0 0 chr18 41955571 41955613 -44721935 + AT_rich Low_complexity Low_complexity 1 42 0 1638 167 51 11 chr18 41956038 41956375 -44721173 + AluJb SINE Alu 1 348 0 832 137 20 20 chr18 41956484 41956792 -44720756 + GA-rich Low_complexity Low_complexity 1 308 0 337 288 17 46 chr18 41957011 41957182 -44720366 - MIR SINE MIR -56 206 42 249 33 0 0 chr18 41957475 41957505 -44720043 + (TTTTA)n Simple_repeat Simple_repeat 3 32 0 1583 148 29 0 chr18 41957514 41957757 -44719791 - AluSx SINE Alu -24 288 39 379 338 117 26 chr18 41957789 41958141 -44719407 + L2 LINE L2 2468 2851 -463 250 274 0 29 chr18 41958907 41959057 -44718491 + MLT1B LTR MaLR 1 175 -215 522 304 58 26 chr18 41959318 41959509 -44718039 - MIR SINE MIR -60 202 6 3963 54 0 0 chr18 42159609 42160093 -44517455 - MER11C LTR ERVK -587 484 1 198 405 15 8 chr18 42160296 42160427 -44517121 + L2 LINE L2 2818 2949 -323 3835 112 11 0 chr18 42160530 42161086 -44516462 + HSMAR2 DNA Mariner 740 1301 -1 1885 127 85 25 chr18 42162156 42162510 -44515038 - THE1C LTR MaLR 0 375 1 449 227 106 8 chr18 42162945 42163077 -44514471 + MER103 DNA DNA 2 146 -20 593 314 64 9 chr18 42164384 42164736 -44512812 + HAL1b LINE L1 332 611 -737 2217 96 14 0 chr18 42164930 42165221 -44512327 + AluY SINE Alu 1 295 -16 9230 73 10 17 chr18 42165496 42166829 -44510719 + L1P LINE L1 663 1985 -4161 797 277 35 13 chr18 42167302 42167533 -44510015 - MIR SINE MIR 0 262 27 353 346 101 0 chr18 42167628 42167845 -44509703 + MIR SINE MIR 18 256 -6 977 207 5 14 chr18 42167850 42168058 -44509490 + L1MA9 LINE L1 5828 6033 -279 807 269 50 50 chr18 42168747 42169104 -44508444 + LTR33 LTR ERVL 1 357 -164 1093 245 13 76 chr18 42169106 42169489 -44508059 + MER74A LTR ERVL 1 359 -199 9428 41 1 4 chr18 42169589 42170753 -44506795 + HERVK11D LTR ERVK 4161 5320 -2432 5807 60 0 1 chr18 42170747 42171477 -44506071 + HERVK11D LTR ERVK 5711 6439 -1313 * 675 219 40 3 chr18 42171588 42171777 -44505771 + MLT2E LTR ERVL 20 222 -441 358 328 15 30 chr18 42171899 42172097 -44505451 + MLT2F LTR ERVL 441 635 -28 425 241 83 23 chr18 42172201 42172259 -44505289 + MIR SINE MIR 88 141 -121 1531 125 0 17 chr18 42172259 42172499 -44505049 - MER46A DNA MER2_type 0 236 1 425 241 83 23 chr18 42172499 42172573 -44504975 + MIR SINE MIR 141 228 -34 187 318 0 0 chr18 42172992 42173036 -44504512 + MIR3 SINE MIR 111 154 -54 2259 113 33 30 chr18 42174016 42174378 -44503170 - THE1B LTR MaLR -1 363 1 400 239 43 34 chr18 42174379 42174496 -44503052 - LTR16C LTR ERVL -9 482 365 2554 48 0 0 chr18 42174924 42175218 -44502330 - AluY SINE Alu -17 294 1 3231 141 31 7 chr18 42175262 42175803 -44501745 + MER41C LTR ERV1 1 554 0 226 197 15 30 chr18 42176122 42176188 -44501360 + MLT1J2 LTR MaLR 71 135 -315 196 303 0 66 chr18 42176601 42176677 -44500871 + L2 LINE L2 3243 3313 0 501 309 122 35 chr18 42177995 42178447 -44499101 + LTR33 LTR ERVL 1 521 0 302 375 75 19 chr18 42178503 42178663 -44498885 + MER91A DNA MER1_type 28 196 0 281 308 96 26 chr18 42180781 42180937 -44496611 - MIR SINE MIR -6 256 90 326 272 49 12 chr18 42180973 42181135 -44496413 + L1M4 LINE L1 15 182 -6360 2468 221 50 102 chr18 42181199 42181987 -44495561 + L1M4 LINE L1 4366 5193 -1451 2179 94 3 19 chr18 42181987 42182368 -44495180 - AluY SINE Alu 0 311 4 2468 221 50 102 chr18 42182368 42182384 -44495164 + L1M4 LINE L1 5193 5208 -1436 1002 114 11 11 chr18 42182384 42182559 -44494989 + (TTTC)n Simple_repeat Simple_repeat 2 176 0 2468 221 50 102 chr18 42182559 42182856 -44494692 + L1M4 LINE L1 5208 5411 -1233 852 283 38 16 chr18 42182883 42183201 -44494347 + L1MB7 LINE L1 5860 6184 0 238 309 123 6 chr18 42183208 42183370 -44494178 - MIR SINE MIR -8 254 74 183 42 0 0 chr18 42183881 42183905 -44493643 + (CA)n Simple_repeat Simple_repeat 1 24 0 360 75 15 30 chr18 42184151 42184218 -44493330 + (GGAA)n Simple_repeat Simple_repeat 3 68 0 312 293 0 12 chr18 42185182 42185264 -44492284 + MER5A DNA MER1_type 11 91 -98 246 260 39 13 chr18 42185205 42185282 -44492266 - MER5A DNA MER1_type -22 167 89 * 601 191 8 8 chr18 42185352 42185478 -44492070 + FLAM_C SINE Alu 16 141 -2 197 283 54 43 chr18 42185761 42185853 -44491695 + MIR SINE MIR 49 141 -121 1974 67 0 8 chr18 42186085 42186340 -44491208 - AluY SINE Alu 0 311 59 22 94 0 0 chr18 42187679 42187743 -44489805 + AT_rich Low_complexity Low_complexity 1 64 0 198 128 0 0 chr18 42188204 42188243 -44489305 + (A)n Simple_repeat Simple_repeat 1 39 0 615 230 37 56 chr18 42190627 42190788 -44486760 + LTR35 LTR ERV1 461 618 0 211 245 43 85 chr18 42191258 42191352 -44486196 + MIR SINE MIR 35 124 -84 501 250 52 35 chr18 42192561 42192733 -44484815 + MER5B DNA MER1_type 4 178 0 26 30 0 0 chr18 42194331 42194364 -44483184 + AT_rich Low_complexity Low_complexity 1 33 0 551 311 77 6 chr18 42195829 42196217 -44481331 - LTR33A LTR ERVL -5 518 67 204 40 0 0 chr18 42199508 42199533 -44478015 + (GA)n Simple_repeat Simple_repeat 2 26 0 23 54 0 0 chr18 42200029 42200066 -44477482 + AT_rich Low_complexity Low_complexity 1 37 0 480 317 75 25 chr18 42200596 42200836 -44476712 + MIR SINE MIR 11 262 0 246 224 0 0 chr18 42202341 42202390 -44475158 + (TG)n Simple_repeat Simple_repeat 2 50 0 1830 182 10 0 chr18 42202429 42202726 -44474822 - AluJo SINE Alu -12 300 1 231 61 0 0 chr18 42203113 42203146 -44474402 + (A)n Simple_repeat Simple_repeat 1 33 0 665 253 55 22 chr18 42204945 42205127 -44472421 + MIR SINE MIR 50 237 -25 257 106 0 85 chr18 42205140 42205187 -44472361 - MLT2A2 LTR ERVL 0 444 402 268 242 15 0 chr18 42205187 42205253 -44472295 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 2825 92 32 2 chr18 42205253 42205653 -44471895 - MLT2A2 LTR ERVL -40 413 2 1648 175 3 29 chr18 42205857 42206333 -44471215 + AluJb SINE Alu 12 479 0 811 101 30 30 chr18 42206165 42206380 -44471168 + GA-rich Low_complexity Low_complexity 1 215 0 1612 203 100 44 chr18 42206506 42206984 -44470564 - MLT1D LTR MaLR 0 505 1 2392 8 0 0 chr18 42207458 42207717 -44469831 + AluYa5 SINE Alu 46 304 -7 255 266 51 0 chr18 42208860 42208939 -44468609 + MIR SINE MIR 125 207 -55 1031 96 6 13 chr18 42209170 42209327 -44468221 + AluSg/x SINE Alu 156 311 -1 247 250 0 0 chr18 42209585 42209637 -44467911 + GA-rich Low_complexity Low_complexity 2 53 0 282 277 44 53 chr18 42209763 42209877 -44467671 - MIR SINE MIR -91 117 4 354 342 92 55 chr18 42210060 42210677 -44466871 - L1M4 LINE L1 -977 5169 4530 367 314 83 75 chr18 42210791 42211163 -44466385 - L1M4 LINE L1 -1817 4329 3955 863 120 14 21 chr18 42211177 42211319 -44466229 + LTR12 LTR ERV1 69 209 -505 * 1398 211 3 248 chr18 42211318 42211907 -44465641 - LTR12 LTR ERV1 -269 445 1 22 0 0 0 chr18 42212015 42212037 -44465511 + AT_rich Low_complexity Low_complexity 1 22 0 460 310 123 25 chr18 42212931 42213134 -44464414 + LTR16C LTR ERVL 98 320 -171 333 253 51 0 chr18 42213178 42213257 -44464291 + LTR16C LTR ERVL 409 491 0 22 0 0 0 chr18 42213684 42213706 -44463842 + AT_rich Low_complexity Low_complexity 1 22 0 2214 145 22 6 chr18 42214235 42214593 -44462955 - THE1B LTR MaLR 0 364 1 225 0 0 91 chr18 42215307 42215351 -44462197 + (TAAAG)n Simple_repeat Simple_repeat 2 41 0 191 378 94 8 chr18 42216102 42216229 -44461319 + MIR SINE MIR 58 195 -67 678 308 72 11 chr18 42217532 42217795 -44459753 - L3 LINE CR1 -2 1575 1297 186 133 0 0 chr18 42218753 42218783 -44458765 + (TG)n Simple_repeat Simple_repeat 2 31 0 422 189 9 0 chr18 42218990 42219101 -44458447 + (TA)n Simple_repeat Simple_repeat 1 112 0 193 355 171 0 chr18 42219480 42219632 -44457916 - MER5B DNA MER1_type 0 178 1 26 0 0 0 chr18 42220140 42220166 -44457382 + AT_rich Low_complexity Low_complexity 1 26 0 2057 217 50 16 chr18 42221546 42221691 -44455857 - L1MA10 LINE L1 -1 6333 6194 192 77 0 0 chr18 42221691 42221717 -44455831 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2057 217 50 16 chr18 42221717 42222115 -44455433 - L1MA10 LINE L1 -140 6194 5772 621 225 8 0 chr18 42222113 42222233 -44455315 + L1MA10 LINE L1 5622 5742 -592 * 207 269 0 0 chr18 42222502 42222554 -44454994 - L2 LINE L2 -1 3312 3261 404 95 73 0 chr18 42222874 42223011 -44454537 + (TA)n Simple_repeat Simple_repeat 2 148 0 322 239 17 26 chr18 42224399 42224516 -44453032 + (TA)n Simple_repeat Simple_repeat 2 117 0 269 290 157 60 chr18 42224887 42225172 -44452376 + MLT1J LTR MaLR 1 279 -167 387 73 0 0 chr18 42226125 42226180 -44451368 + (CA)n Simple_repeat Simple_repeat 1 55 0 230 284 125 77 chr18 42226321 42226529 -44451019 - L2 LINE L2 -527 2787 2570 189 74 0 0 chr18 42227242 42227269 -44450279 + (TTTTTG)n Simple_repeat Simple_repeat 2 28 0 322 184 11 11 chr18 42228188 42228275 -44449273 + (TA)n Simple_repeat Simple_repeat 1 87 0 22 70 0 0 chr18 42228815 42228858 -44448690 + AT_rich Low_complexity Low_complexity 1 43 0 191 167 0 21 chr18 42229640 42229688 -44447860 + GA-rich Low_complexity Low_complexity 1 47 0 4771 147 52 0 chr18 42231853 42233666 -44443882 + L1PA16 LINE L1 4299 6157 -9 322 326 72 27 chr18 42234651 42235513 -44442035 + L1M4 LINE L1 2638 3538 -2608 22 56 0 0 chr18 42236218 42236254 -44441294 + AT_rich Low_complexity Low_complexity 1 36 0 336 48 0 0 chr18 42236254 42236296 -44441252 + (CA)n Simple_repeat Simple_repeat 2 43 0 1446 272 62 56 chr18 42236307 42236965 -44440583 + MLT2F LTR ERVL 1 662 -1 37 62 0 0 chr18 42237271 42237336 -44440212 + AT_rich Low_complexity Low_complexity 1 65 0 3290 138 65 97 chr18 42239063 42239874 -44437674 - LTR1 LTR ERV1 0 785 1 29 28 0 0 chr18 42239988 42240024 -44437524 + AT_rich Low_complexity Low_complexity 1 36 0 263 148 0 16 chr18 42241264 42241325 -44436223 + (TA)n Simple_repeat Simple_repeat 1 60 0 1988 130 62 25 chr18 42242123 42242478 -44435070 + THE1C LTR MaLR 1 368 -7 218 390 64 0 chr18 42242530 42242671 -44434877 + MIR SINE MIR 22 171 -91 300 298 18 26 chr18 42242930 42243044 -44434504 + MER67D LTR ERV1 334 446 -68 358 309 44 15 chr18 42245031 42245167 -44432381 + L3 LINE CR1 1184 1323 -254 252 250 16 0 chr18 42245491 42245555 -44431993 + CT-rich Low_complexity Low_complexity 2 66 0 22 70 0 0 chr18 42245688 42245731 -44431817 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr18 42246099 42246120 -44431428 + AT_rich Low_complexity Low_complexity 1 21 0 673 103 112 0 chr18 42246149 42246256 -44431292 + L1PA7 LINE L1 6033 6151 -3 211 293 91 40 chr18 42249635 42249734 -44427814 + L2 LINE L2 3169 3272 0 214 269 93 46 chr18 42250148 42250256 -44427292 - L3 LINE CR1 -13 1564 1452 302 294 116 58 chr18 42250727 42251003 -44426545 + MER102a DNA MER1_type 28 319 -11 22 56 0 0 chr18 42252542 42252578 -44424970 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr18 42252750 42252778 -44424770 + AT_rich Low_complexity Low_complexity 1 28 0 208 304 0 0 chr18 42252778 42252834 -44424714 - L3b LINE CR1 -1 1582 1527 * 438 343 204 39 chr18 42252833 42253952 -44423596 + L2 LINE L2 639 1572 -1742 2162 117 0 0 chr18 42253952 42254250 -44423298 - AluSg SINE Alu -8 302 5 438 343 204 39 chr18 42254250 42254952 -44422596 + L2 LINE L2 1572 2760 -554 479 349 110 33 chr18 42255677 42256195 -44421353 + HAL1 LINE L1 323 880 -1627 211 385 0 11 chr18 42256334 42256425 -44421123 + MIR SINE MIR 16 105 -157 294 227 68 76 chr18 42257131 42257263 -44420285 + L1MC5 LINE L1 7798 7928 -33 1395 256 68 54 chr18 42257566 42258328 -44419220 - L1M4 LINE L1 -1065 5081 4309 811 249 33 19 chr18 42258336 42258707 -44418841 - MLT1E2 LTR MaLR -1 623 206 379 230 52 106 chr18 42258707 42258871 -44418677 - MLT1E3 LTR MaLR -271 234 110 2078 98 7 7 chr18 42258871 42259177 -44418371 + AluSg1 SINE Alu 1 306 -3 379 230 52 106 chr18 42259177 42259282 -44418266 - MLT1E3 LTR MaLR -395 110 1 24 32 0 0 chr18 42259334 42259365 -44418183 + AT_rich Low_complexity Low_complexity 1 31 0 1631 279 71 26 chr18 42259508 42260629 -44416919 - L1M4 LINE L1 -2084 4062 2891 483 295 67 79 chr18 42260741 42261171 -44416377 + L1MDa LINE L1 14 438 -6102 303 271 0 29 chr18 42261368 42261442 -44416106 + L1MDa LINE L1 588 968 -5572 271 323 68 41 chr18 42261520 42261740 -44415808 + L2 LINE L2 3006 3231 -82 618 333 12 24 chr18 42261899 42262145 -44415403 + MLT1I LTR MaLR 161 403 -6 31 26 0 0 chr18 42262151 42262189 -44415359 + AT_rich Low_complexity Low_complexity 1 38 0 192 379 23 8 chr18 42263146 42263278 -44414270 + L2 LINE L2 3179 3312 -1 258 290 14 0 chr18 42266093 42266162 -44411386 + CT-rich Low_complexity Low_complexity 2 71 0 322 289 0 0 chr18 42266634 42266717 -44410831 + MIR SINE MIR 146 228 -34 250 331 60 26 chr18 42266774 42266930 -44410618 - MIR SINE MIR -64 144 30 446 317 34 38 chr18 42267330 42267778 -44409770 - L1M4 LINE L1 -1320 4826 4381 21 36 0 0 chr18 42267784 42267812 -44409736 + AT_rich Low_complexity Low_complexity 1 28 0 335 165 31 62 chr18 42267872 42267969 -44409579 - L1ME3 LINE L1 -24 6138 6045 495 59 0 0 chr18 42267969 42268037 -44409511 - AluJ/FRAM SINE Alu -14 298 231 1354 298 51 38 chr18 42268471 42269453 -44408095 - L1M4 LINE L1 -2161 3985 2991 1899 253 52 80 chr18 42269503 42269798 -44407750 + L1ME1 LINE L1 5127 5429 -737 2072 84 47 0 chr18 42269798 42270073 -44407475 + AluSx SINE Alu 2 289 -23 1899 253 52 80 chr18 42270073 42270779 -44406769 + L1ME1 LINE L1 5429 6101 -65 961 305 48 10 chr18 42271223 42271515 -44406033 + MLT2E LTR ERVL 21 323 -305 12405 150 42 28 chr18 42271518 42273802 -44403746 + Tigger1 DNA MER2_type 1 2316 -102 2215 109 32 35 chr18 42273803 42274179 -44403369 + THE1C LTR MaLR 1 375 0 5561 131 122 7 chr18 42274180 42275560 -44401988 + THE1C-int LTR MaLR 2 1580 0 2297 136 11 8 chr18 42275560 42275934 -44401614 + THE1C LTR MaLR 1 375 0 400 171 207 0 chr18 42275934 42276016 -44401532 + Tigger1 DNA MER2_type 2320 2418 0 373 284 54 0 chr18 42276095 42276243 -44401305 + MLT2E LTR ERVL 471 626 -2 189 103 51 26 chr18 42276943 42276982 -44400566 - MER5C DNA MER1_type -206 118 79 244 351 26 0 chr18 42277402 42277479 -44400069 + L2 LINE L2 3156 3234 -38 315 307 39 26 chr18 42277804 42277957 -44399591 - MLT1H LTR MaLR -6 543 389 4999 123 12 5 chr18 42278007 42278786 -44398762 - L1PA13 LINE L1 -8 6155 5372 6723 90 4 0 chr18 42278810 42280033 -44397515 + L1PA8 LINE L1 4950 6178 0 257 0 0 0 chr18 42280049 42280079 -44397469 + L1P LINE L1 5327 5356 -800 604 273 82 28 chr18 42280100 42280345 -44397203 - MLT1H LTR MaLR -251 298 1 381 43 0 0 chr18 42280423 42280470 -44397078 + (CA)n Simple_repeat Simple_repeat 2 48 0 436 297 103 0 chr18 42281989 42282154 -44395394 + MIR SINE MIR 81 262 0 387 317 49 0 chr18 42282920 42283062 -44394486 + MIR SINE MIR 41 189 -73 276 53 0 0 chr18 42283065 42283103 -44394445 + (CA)n Simple_repeat Simple_repeat 1 38 0 201 186 0 23 chr18 42283520 42283563 -44393985 + A-rich Low_complexity Low_complexity 3 44 0 549 274 104 18 chr18 42284131 42284295 -44393253 + MER5A DNA MER1_type 12 189 0 832 237 11 0 chr18 42284403 42284589 -44392959 + MER5A DNA MER1_type 1 188 -1 827 223 107 103 chr18 42285120 42285623 -44391925 + MLT1D LTR MaLR 1 505 0 29 0 0 0 chr18 42285998 42286027 -44391521 + AT_rich Low_complexity Low_complexity 1 29 0 816 235 118 76 chr18 42286177 42286781 -44390767 - Charlie2 DNA MER1_type -6 2856 2228 290 304 22 109 chr18 42286874 42287104 -44390444 - MLT1I LTR MaLR -2 407 198 365 323 114 30 chr18 42287345 42287546 -44390002 - Charlie2 DNA MER1_type -2534 248 31 212 57 0 29 chr18 42287778 42287813 -44389735 + (GA)n Simple_repeat Simple_repeat 1 34 0 267 125 42 0 chr18 42287836 42287908 -44389640 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 197 335 100 40 chr18 42289584 42289784 -44387764 + L2 LINE L2 3102 3313 0 189 277 84 60 chr18 42290187 42290270 -44387278 + MER5A DNA MER1_type 87 171 -18 1712 79 79 0 chr18 42290349 42290603 -44386945 - L1MA1 LINE L1 -4 6298 6025 1661 266 36 4 chr18 42290903 42291458 -44386090 - MLT1E2 LTR MaLR -9 617 3 30 0 0 0 chr18 42292465 42292495 -44385053 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr18 42292548 42292570 -44384978 + AT_rich Low_complexity Low_complexity 1 22 0 1350 245 19 63 chr18 42292702 42293034 -44384514 - MSTD LTR MaLR -2 394 82 2268 89 17 0 chr18 42293034 42293327 -44384221 + AluSg SINE Alu 3 300 -10 1350 245 19 63 chr18 42293327 42293406 -44384142 - MSTD LTR MaLR -314 82 1 1449 305 59 24 chr18 42293424 42294139 -44383409 - HsTC2a DNA Tc2 -4 740 1 31 82 0 0 chr18 42294459 42294532 -44383016 + AT_rich Low_complexity Low_complexity 1 73 0 1574 258 150 28 chr18 42295744 42295879 -44381669 - L1MC4 LINE L1 -6 8036 7919 222 91 0 0 chr18 42295879 42295912 -44381636 + (TG)n Simple_repeat Simple_repeat 2 34 0 1574 258 150 28 chr18 42295912 42296618 -44380930 - L1MC4 LINE L1 -123 7919 7048 180 77 0 0 chr18 42296618 42296644 -44380904 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 1574 258 150 28 chr18 42296644 42296813 -44380735 - L1MC4 LINE L1 -994 7048 6901 8035 224 53 25 chr18 42296975 42298597 -44378951 + L1MA8 LINE L1 3419 5133 -2432 234 0 0 0 chr18 42298597 42298623 -44378925 + (CAA)n Simple_repeat Simple_repeat 2 27 0 8035 224 53 25 chr18 42298623 42299461 -44378087 + L1MA8 LINE L1 5133 5946 -1619 4367 200 32 9 chr18 42299473 42300645 -44376903 + L1MA8 LINE L1 6481 7681 -29 861 270 50 28 chr18 42300870 42301270 -44376278 - L1MEc LINE L1 -1676 4539 4131 1207 324 48 9 chr18 42301272 42301797 -44375751 - MLT1G LTR MaLR 0 590 46 882 288 119 8 chr18 42301861 42302347 -44375201 - L1MEc LINE L1 -2110 4105 3566 1619 181 3 85 chr18 42302351 42302715 -44374833 - MER7A DNA MER2_type 0 346 15 897 287 35 10 chr18 42302717 42303121 -44374427 - L1MEc LINE L1 -3142 3073 2660 6438 100 2 0 chr18 42303199 42304157 -44373391 + L1P LINE L1 4457 5416 -755 385 253 65 7 chr18 42304132 42304286 -44373262 - L1MEc LINE L1 -3651 2564 2402 * 747 240 29 79 chr18 42304296 42304575 -44372973 + MLT1D LTR MaLR 1 265 -240 559 221 0 16 chr18 42304564 42304686 -44372862 + MLT1D LTR MaLR 380 499 -6 * 231 301 98 6 chr18 42304825 42305008 -44372540 - L1MEc LINE L1 -4112 2284 2085 6632 63 17 7 chr18 42305013 42306085 -44371463 - L1PA8 LINE L1 -1 6171 5114 766 303 53 70 chr18 42306253 42307026 -44370522 - L1MEc LINE L1 -5077 1128 369 567 366 89 21 chr18 42307822 42308292 -44369256 + L2 LINE L2 2213 2714 -600 23 68 0 0 chr18 42308327 42308371 -44369177 + AT_rich Low_complexity Low_complexity 1 44 0 185 348 112 54 chr18 42308371 42308595 -44368953 + L2 LINE L2 2736 2972 -342 836 126 0 7 chr18 42308623 42308758 -44368790 - L1MA2 LINE L1 0 6304 6171 1937 144 3 19 chr18 42308784 42309096 -44368452 - AluSx SINE Alu -1 311 5 316 311 37 94 chr18 42309124 42309423 -44368125 + L2 LINE L2 3003 3284 -29 274 266 16 0 chr18 42309640 42309768 -44367780 + (TA)n Simple_repeat Simple_repeat 1 130 0 2028 130 0 0 chr18 42310026 42310341 -44367207 - AluSq SINE Alu 0 315 1 1953 63 0 4 chr18 42311898 42312153 -44365395 - L1PA5 LINE L1 0 6154 5901 236 303 50 30 chr18 42315118 42315217 -44362331 - MIR SINE MIR -70 138 38 711 328 81 50 chr18 42315287 42316094 -44361454 - L2 LINE L2 -1 3312 2479 189 74 0 0 chr18 42316423 42316450 -44361098 + (TC)n Simple_repeat Simple_repeat 2 28 0 357 321 38 0 chr18 42316899 42317030 -44360518 + L2 LINE L2 3178 3313 0 309 26 0 0 chr18 42317744 42317782 -44359766 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 0 0 0 chr18 42317806 42317829 -44359719 + AT_rich Low_complexity Low_complexity 1 23 0 360 111 0 0 chr18 42320171 42320225 -44357323 + (TG)n Simple_repeat Simple_repeat 1 54 0 1940 137 0 13 chr18 42320279 42320579 -44356969 - AluSx SINE Alu 0 312 17 426 20 0 0 chr18 42320619 42320670 -44356878 + (CA)n Simple_repeat Simple_repeat 2 52 0 1609 213 28 92 chr18 42321554 42322206 -44355342 + L1MD3 LINE L1 6921 7708 -287 326 87 0 0 chr18 42322206 42322252 -44355296 + MADE1 DNA Mariner 33 78 -2 1609 213 28 92 chr18 42322252 42322521 -44355027 + L1MD3 LINE L1 7708 7993 -2 1737 278 49 26 chr18 42323770 42324342 -44353206 - MER89-int LTR ERV1 -1750 5051 4467 6643 78 10 12 chr18 42324435 42325808 -44351740 - L1PA8 LINE L1 0 6172 4806 333 311 134 5 chr18 42328576 42328738 -44348810 + MIR SINE MIR 6 202 -60 450 0 0 0 chr18 42328738 42328788 -44348760 + (TA)n Simple_repeat Simple_repeat 1 50 0 333 311 134 5 chr18 42328788 42328834 -44348714 + MIR SINE MIR 202 241 -21 355 317 30 18 chr18 42328843 42329010 -44348538 + MLT1I LTR MaLR 10 178 -231 221 208 0 19 chr18 42330016 42330069 -44347479 + (TAAA)n Simple_repeat Simple_repeat 1 52 0 209 245 57 0 chr18 42330572 42330625 -44346923 - MIR SINE MIR -113 149 94 1129 260 99 25 chr18 42332552 42332987 -44344561 + MLT1C LTR MaLR 1 467 0 490 251 126 66 chr18 42333285 42333718 -44343830 - LTR33A LTR ERVL -23 500 1 249 269 0 0 chr18 42333775 42333827 -44343721 - L2 LINE L2 0 3272 3221 212 151 9 57 chr18 42333846 42333952 -44343596 + (TA)n Simple_repeat Simple_repeat 1 101 0 693 334 66 33 chr18 42334114 42334236 -44343312 - L2 LINE L2 -253 3060 2944 1566 247 53 59 chr18 42334236 42334714 -44342834 + MLT2B1 LTR ERVL 1 477 -43 429 20 0 0 chr18 42334714 42334764 -44342784 + (TCTA)n Simple_repeat Simple_repeat 4 53 0 1566 247 53 59 chr18 42334764 42334808 -44342740 + MLT2B1 LTR ERVL 477 520 0 693 334 66 33 chr18 42334808 42335236 -44342312 - L2 LINE L2 -369 2944 2488 252 407 28 11 chr18 42335966 42336148 -44341400 + L3 LINE CR1 1388 1572 -5 23 86 0 0 chr18 42336305 42336363 -44341185 + AT_rich Low_complexity Low_complexity 1 58 0 305 320 61 35 chr18 42336412 42336609 -44340939 - MIR SINE MIR -55 207 6 1213 188 0 18 chr18 42336808 42337037 -44340511 + AluSq SINE Alu 85 309 -4 1515 272 86 57 chr18 42337134 42339040 -44338508 - L1MCc LINE L1 -4167 2440 300 327 303 35 14 chr18 42339386 42339528 -44338020 - L1MCc LINE L1 -6258 168 24 1872 137 10 46 chr18 42340769 42341076 -44336472 - AluSq SINE Alu -15 298 3 2316 90 0 3 chr18 42342036 42342336 -44335212 + AluY SINE Alu 1 299 -12 1902 67 3 43 chr18 42342526 42342808 -44334740 - L1PA7 LINE L1 -4 6150 5880 447 329 9 36 chr18 42343539 42343862 -44333686 + MER115 DNA AcHobo 309 680 -13 250 355 48 8 chr18 42344910 42345034 -44332514 - L3 LINE CR1 -483 1094 966 738 104 0 0 chr18 42345184 42345314 -44332234 + AluY SINE Alu 181 310 0 271 284 178 18 chr18 42346157 42346382 -44331166 - L3 LINE CR1 -607 970 710 210 279 44 0 chr18 42346417 42346485 -44331063 + MIR SINE MIR 46 116 -92 1645 197 0 3 chr18 42346513 42346807 -44330741 + AluJb SINE Alu 2 294 -18 2200 105 0 0 chr18 42347016 42347343 -44330205 - AluSq SINE Alu 0 327 1 1554 172 60 18 chr18 42347373 42347705 -44329843 - MER7A DNA MER2_type -2 344 1 491 228 0 0 chr18 42348144 42348236 -44329312 + MER31A LTR ERV1 102 193 -292 318 180 29 151 chr18 42348223 42348362 -44329186 + Tigger3(Golem) DNA MER2_type 2822 2943 -86 * 1551 133 48 4 chr18 42348367 42348638 -44328910 + MER31A LTR ERV1 203 485 0 2108 171 0 6 chr18 42348805 42349144 -44328404 - MER1B DNA MER1_type 0 337 1 237 65 0 0 chr18 42350161 42350192 -44327356 + (T)n Simple_repeat Simple_repeat 1 31 0 259 326 71 0 chr18 42351504 42351602 -44325946 - MIR3 SINE MIR -17 191 87 1874 127 0 11 chr18 42351661 42351929 -44325619 + AluSx SINE Alu 1 265 -47 382 337 51 17 chr18 42352531 42352706 -44324842 + MIR SINE MIR 16 196 -66 208 320 39 26 chr18 42352974 42353052 -44324496 - MIR SINE MIR -67 141 63 513 302 56 39 chr18 42353760 42353939 -44323609 + MIR3 SINE MIR 16 197 -11 419 346 5 48 chr18 42353950 42354138 -44323410 + MIR3 SINE MIR 24 203 -5 224 282 37 120 chr18 42354144 42354385 -44323163 - L2 LINE L2 -95 3218 2998 228 125 25 0 chr18 42355946 42355986 -44321562 - L2 LINE L2 0 3313 3273 861 151 0 14 chr18 42356071 42356210 -44321338 - FLAM_C SINE Alu -4 139 3 556 358 46 45 chr18 42356356 42356985 -44320563 - L2 LINE L2 -1119 2195 1566 200 159 0 23 chr18 42357439 42357483 -44320065 + CT-rich Low_complexity Low_complexity 2 44 0 1697 150 0 0 chr18 42357485 42357751 -44319797 - AluSx SINE Alu -3 309 44 197 406 65 0 chr18 42358463 42358618 -44318930 + L2 LINE L2 2553 2717 -597 189 231 19 39 chr18 42358870 42358922 -44318626 + L2 LINE L2 3020 3070 -202 231 217 0 0 chr18 42360726 42360772 -44316776 + (TG)n Simple_repeat Simple_repeat 1 46 0 329 253 44 148 chr18 42363486 42363668 -44313880 + MER5A DNA MER1_type 3 165 -24 34 24 0 0 chr18 42365182 42365223 -44312325 + AT_rich Low_complexity Low_complexity 1 41 0 333 187 0 0 chr18 42365601 42365676 -44311872 + (TATTG)n Simple_repeat Simple_repeat 3 77 0 2151 151 5 24 chr18 42366451 42366822 -44310726 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr18 42366962 42366985 -44310563 + AT_rich Low_complexity Low_complexity 1 23 0 1363 192 19 0 chr18 42367305 42367565 -44309983 - AluSx SINE Alu -2 310 46 354 317 142 16 chr18 42367886 42368069 -44309479 + L2 LINE L2 3108 3313 0 22 0 0 0 chr18 42368197 42368219 -44309329 + AT_rich Low_complexity Low_complexity 1 22 0 1087 70 0 37 chr18 42368408 42368504 -44309044 + (TTTC)n Simple_repeat Simple_repeat 1 88 -92 1937 74 4 0 chr18 42368504 42368760 -44308788 - L1PA7 LINE L1 -4 6150 5894 1087 70 0 37 chr18 42368760 42368850 -44308698 + (TTTC)n Simple_repeat Simple_repeat 88 180 0 905 135 17 6 chr18 42368847 42369025 -44308523 + CT-rich Low_complexity Low_complexity 1 180 0 * 1203 207 6 63 chr18 42369025 42369213 -44308335 - AluJo SINE Alu -11 301 137 2345 90 0 3 chr18 42369213 42369524 -44308024 - AluY SINE Alu -1 310 1 1203 207 6 63 chr18 42369524 42369654 -44307894 - AluJo SINE Alu -175 137 1 4491 81 3 0 chr18 42369992 42370582 -44306966 - L1PA7 LINE L1 -1 6153 5562 9350 88 33 75 chr18 42370582 42372768 -44304780 + L1PA4 LINE L1 4020 6154 -1 394 181 11 69 chr18 42373002 42373190 -44304358 + (TTATA)n Simple_repeat Simple_repeat 1 177 0 4531 188 38 45 chr18 42374370 42375126 -44302422 + L1MA9 LINE L1 5074 5834 -478 324 0 0 0 chr18 42375126 42375162 -44302386 + (CA)n Simple_repeat Simple_repeat 2 37 0 4531 188 38 45 chr18 42375162 42375512 -44302036 + L1MA9 LINE L1 5834 6170 -142 225 65 0 0 chr18 42375512 42375543 -44302005 + (CA)n Simple_repeat Simple_repeat 2 32 0 4531 188 38 45 chr18 42375543 42375685 -44301863 + L1MA9 LINE L1 6170 6312 0 24 0 0 0 chr18 42375685 42375709 -44301839 + AT_rich Low_complexity Low_complexity 1 24 0 734 235 28 0 chr18 42375721 42375900 -44301648 + L1M4 LINE L1 7 190 -6352 519 46 0 0 chr18 42375896 42375961 -44301587 - L1P3 LINE L1 -565 5589 5525 * 552 93 0 0 chr18 42375961 42376047 -44301501 + L1PA7 LINE L1 6067 6152 -2 274 252 21 119 chr18 42376047 42376190 -44301358 + L1M4 LINE L1 178 306 -6236 498 152 43 74 chr18 42376190 42376311 -44301237 + MLT2B1 LTR ERVL 44 175 -345 * 782 224 103 0 chr18 42376308 42376473 -44301075 + MLT2B1 LTR ERVL 332 513 -7 40 59 0 0 chr18 42378584 42378652 -44298896 + AT_rich Low_complexity Low_complexity 1 68 0 4284 164 41 14 chr18 42378667 42379144 -44298404 - Tigger3b DNA MER2_type -2206 822 313 387 0 0 0 chr18 42379144 42379187 -44298361 + (CA)n Simple_repeat Simple_repeat 2 44 0 4284 164 41 14 chr18 42379187 42379509 -44298039 - Tigger3b DNA MER2_type -2715 313 1 1577 188 20 12 chr18 42379537 42379882 -44297666 + L1MB3 LINE L1 5835 6182 -1 390 310 46 51 chr18 42380784 42380981 -44296567 + MIR SINE MIR 7 199 -61 34 65 0 0 chr18 42381018 42381080 -44296468 + AT_rich Low_complexity Low_complexity 1 62 0 506 308 61 33 chr18 42381080 42381294 -44296254 - MIR SINE MIR -29 233 14 27 49 0 0 chr18 42383592 42383633 -44293915 + AT_rich Low_complexity Low_complexity 1 41 0 204 209 23 0 chr18 42385435 42385478 -44292070 - L2 LINE L2 -12 3260 3217 2228 115 3 0 chr18 42385478 42385782 -44291766 + AluSq SINE Alu 1 305 -8 473 163 3 46 chr18 42386375 42386676 -44290872 + (TA)n Simple_repeat Simple_repeat 1 288 0 294 301 55 0 chr18 42388685 42388758 -44288790 + L2 LINE L2 3196 3272 0 210 156 0 0 chr18 42389881 42389926 -44287622 + (TCTCTG)n Simple_repeat Simple_repeat 2 46 0 6621 70 23 0 chr18 42389942 42390785 -44286763 - L1PA7 LINE L1 0 6154 5279 219 36 0 0 chr18 42390785 42390813 -44286735 + (TTG)n Simple_repeat Simple_repeat 2 29 0 6621 70 23 0 chr18 42390813 42391224 -44286324 - L1PA7 LINE L1 -875 5279 4879 645 149 0 0 chr18 42391225 42391332 -44286216 + L1P LINE L1 4439 4545 -1601 205 242 15 15 chr18 42392236 42392302 -44285246 + (TA)n Simple_repeat Simple_repeat 2 67 0 314 290 0 0 chr18 42392358 42392427 -44285121 - MER81 DNA DNA -45 69 1 824 214 52 0 chr18 42392636 42392846 -44284702 + MER33 DNA MER1_type 12 232 -92 1651 204 12 44 chr18 42392856 42393262 -44284286 + L1MD2 LINE L1 5941 6333 -26 431 209 35 0 chr18 42393262 42393377 -44284171 + MER33 DNA MER1_type 205 323 -1 221 243 0 14 chr18 42394490 42394560 -44282988 + A-rich Low_complexity Low_complexity 1 69 0 299 263 59 34 chr18 42395046 42395164 -44282384 - MIR SINE MIR -23 239 119 231 36 0 0 chr18 42396882 42396910 -44280638 + (T)n Simple_repeat Simple_repeat 1 28 0 755 128 0 15 chr18 42397169 42397302 -44280246 + (TCC)n Simple_repeat Simple_repeat 3 133 0 558 198 9 17 chr18 42397701 42397817 -44279731 + MER5A DNA MER1_type 5 119 -70 7061 186 19 25 chr18 42397881 42400581 -44276967 + L1PA8A LINE L1 3 2743 -3718 9434 133 49 4 chr18 42400581 42402786 -44274762 + L1PA8A LINE L1 4198 6443 -3 1473 240 113 59 chr18 42402900 42403442 -44274106 + MLT1E LTR MaLR 23 593 0 389 286 88 39 chr18 42403772 42403954 -44273594 - MIR SINE MIR -59 203 13 396 0 0 0 chr18 42404013 42404057 -44273491 + (CA)n Simple_repeat Simple_repeat 2 45 0 345 243 10 29 chr18 42404060 42404163 -44273385 - L1MC4 LINE L1 -1332 6710 6610 320 206 33 54 chr18 42404124 42404216 -44273332 + L1MC4 LINE L1 6614 6703 -1339 * 315 264 11 33 chr18 42404176 42404267 -44273281 - L1MC4 LINE L1 -1339 6703 6615 * 358 263 46 86 chr18 42404568 42404743 -44272805 - MER5B DNA MER1_type -3 175 8 230 303 0 15 chr18 42406294 42406360 -44271188 - L2 LINE L2 -62 3251 3187 1427 119 47 0 chr18 42406402 42406638 -44270910 - L1PA11 LINE L1 0 6174 5928 195 42 0 0 chr18 42407290 42407314 -44270234 + (GA)n Simple_repeat Simple_repeat 1 24 0 1161 202 52 102 chr18 42407766 42407947 -44269601 - Charlie4a DNA MER1_type -1454 507 319 2056 94 17 3 chr18 42407947 42408245 -44269303 + AluSg SINE Alu 1 302 -8 1161 202 52 102 chr18 42408245 42408524 -44269024 - Charlie4a DNA MER1_type -1642 319 70 3598 204 11 52 chr18 42409125 42410056 -44267492 + L1PA13 LINE L1 5296 6189 0 2020 269 55 20 chr18 42410314 42411029 -44266519 + L1ME1 LINE L1 4904 5834 -332 2520 38 0 13 chr18 42411029 42411344 -44266204 + AluY SINE Alu 1 311 0 2020 269 55 20 chr18 42411344 42411525 -44266023 + L1ME1 LINE L1 5834 6007 -159 2535 58 0 3 chr18 42412278 42412589 -44264959 + AluY SINE Alu 1 310 -1 216 97 0 0 chr18 42412637 42412668 -44264880 + (T)n Simple_repeat Simple_repeat 1 31 0 515 99 0 0 chr18 42412682 42412763 -44264785 + Alu SINE Alu 232 312 0 1893 242 43 16 chr18 42412768 42413329 -44264219 - L1MC4 LINE L1 -146 7896 7321 216 0 0 0 chr18 42413439 42413463 -44264085 + (A)n Simple_repeat Simple_repeat 1 24 0 186 103 0 0 chr18 42414015 42414044 -44263504 + (A)n Simple_repeat Simple_repeat 1 29 0 2379 78 0 3 chr18 42416857 42417153 -44260395 + AluY SINE Alu 1 295 -16 220 241 203 0 chr18 42417330 42417409 -44260139 + MIR SINE MIR 120 214 -48 775 289 51 32 chr18 42419020 42419373 -44258175 + MLT1G3 LTR MaLR 1 379 -216 738 181 195 24 chr18 42419595 42419805 -44257743 + MLT1F1 LTR MaLR 197 442 -125 462 246 37 68 chr18 42419798 42419989 -44257559 + MLT1F1 LTR MaLR 399 583 -12 * 2514 53 0 3 chr18 42420022 42420321 -44257227 - AluY SINE Alu -13 298 1 597 353 118 35 chr18 42420370 42421005 -44256543 - L2 LINE L2 -568 2746 2059 1066 207 150 14 chr18 42421007 42421287 -44256261 - MLT1F1 LTR MaLR -44 523 206 22224 20 2 0 chr18 42421345 42424751 -44252797 + L1HS LINE L1 2743 6155 0 294 73 0 0 chr18 42424799 42424840 -44252708 + (A)n Simple_repeat Simple_repeat 1 41 0 257 270 58 58 chr18 42425251 42425388 -44252160 + MIR SINE MIR 49 185 -77 21 36 0 0 chr18 42425731 42425759 -44251789 + AT_rich Low_complexity Low_complexity 1 28 0 2204 113 7 3 chr18 42425762 42426071 -44251477 + AluSg SINE Alu 1 310 0 268 245 183 11 chr18 42427169 42427273 -44250275 - MIR SINE MIR -67 141 30 23 0 0 0 chr18 42428128 42428151 -44249397 + AT_rich Low_complexity Low_complexity 1 23 0 585 278 7 0 chr18 42430320 42430464 -44247084 + MIR SINE MIR 115 259 -3 23 33 0 0 chr18 42431361 42431391 -44246157 + AT_rich Low_complexity Low_complexity 1 30 0 206 321 0 0 chr18 42431978 42432034 -44245514 + T-rich Low_complexity Low_complexity 3 58 0 216 227 103 72 chr18 42433042 42433139 -44244409 + MIR SINE MIR 64 163 -99 206 393 40 7 chr18 42433211 42433361 -44244187 - L3 LINE CR1 -223 1354 1200 360 239 23 11 chr18 42433536 42433624 -44243924 - MER69 DNA AcHobo 0 2526 2438 1915 181 25 3 chr18 42434121 42434446 -44243102 + MER1B DNA MER1_type 3 334 -5 959 86 16 0 chr18 42434572 42434700 -44242848 + AluSq SINE Alu 152 281 -32 387 157 0 0 chr18 42434700 42434770 -44242778 + GA-rich Low_complexity Low_complexity 3 72 0 357 185 12 12 chr18 42435727 42435808 -44241740 + MLT1J2 LTR MaLR 370 450 0 469 310 21 7 chr18 42436691 42436836 -44240712 - MIR SINE MIR -66 196 50 201 154 0 0 chr18 42438496 42438535 -44239013 + (TG)n Simple_repeat Simple_repeat 2 40 0 268 350 121 14 chr18 42438965 42439200 -44238348 + L2 LINE L2 1862 2137 -1177 835 223 136 35 chr18 42439200 42439447 -44238101 + MER2 DNA MER2_type 1 287 -57 1873 116 3 72 chr18 42439447 42439766 -44237782 - AluSg SINE Alu -11 299 3 835 223 136 35 chr18 42439766 42439828 -44237720 + MER2 DNA MER2_type 287 341 -3 268 350 121 14 chr18 42439828 42439889 -44237659 + L2 LINE L2 2137 2190 -1124 342 307 83 43 chr18 42440143 42440397 -44237151 + L2 LINE L2 1902 2165 -1149 562 369 53 22 chr18 42440412 42440732 -44236816 + L2 LINE L2 2377 2706 -608 485 348 35 26 chr18 42441034 42441261 -44236287 + MIR SINE MIR 1 229 -33 32 0 0 0 chr18 42441270 42441302 -44236246 + AT_rich Low_complexity Low_complexity 1 32 0 1321 208 106 47 chr18 42441552 42441956 -44235592 - MSTC LTR MaLR 0 428 1 207 0 0 0 chr18 42441998 42442021 -44235527 + (TA)n Simple_repeat Simple_repeat 1 23 0 * 324 0 0 0 chr18 42442020 42442056 -44235492 + (CA)n Simple_repeat Simple_repeat 2 37 0 22 35 0 0 chr18 42442217 42442246 -44235302 + AT_rich Low_complexity Low_complexity 1 29 0 414 235 11 38 chr18 42442464 42442647 -44234901 - Charlie7 DNA MER1_type -1 2611 2434 238 224 47 35 chr18 42442649 42442734 -44234814 - Charlie7 DNA MER1_type -2525 87 2 2266 173 26 9 chr18 42442765 42443196 -44234352 + MER61C LTR ERV1 13 434 0 2176 203 31 5 chr18 42444565 42444989 -44232559 + MER44D DNA MER2_type 1 490 -115 1347 179 38 0 chr18 42445071 42445333 -44232215 - MER7A DNA MER2_type -12 334 65 1078 220 29 41 chr18 42445341 42445736 -44231812 - L1PA16 LINE L1 -2 6166 5796 557 165 0 0 chr18 42445736 42445827 -44231721 - MER7A DNA MER2_type -257 89 1 * 601 179 19 19 chr18 42445827 42445931 -44231617 + MER44D DNA MER2_type 502 605 0 1904 225 40 6 chr18 42446069 42446540 -44231008 + L1MD3 LINE L1 7509 7995 0 629 204 11 74 chr18 42446928 42447104 -44230444 + MER97b DNA MER1_type? 15 179 -874 1263 213 56 46 chr18 42447172 42447500 -44230048 + LTR52 LTR ERVL 1 324 -97 1507 124 0 0 chr18 42447500 42447701 -44229847 - AluSg/x SINE Alu -17 295 95 1263 213 56 46 chr18 42447701 42447717 -44229831 + LTR52 LTR ERVL 324 338 -83 227 79 26 0 chr18 42447717 42447755 -44229793 + (TG)n Simple_repeat Simple_repeat 1 39 0 1263 213 56 46 chr18 42447755 42447823 -44229725 + LTR52 LTR ERVL 338 418 -3 245 67 90 22 chr18 42448550 42448639 -44228909 + (TA)n Simple_repeat Simple_repeat 2 96 0 277 171 45 23 chr18 42448641 42448729 -44228819 + (TATAA)n Simple_repeat Simple_repeat 5 94 0 305 152 46 20 chr18 42448740 42448891 -44228657 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 281 90 97 26 chr18 42448952 42449107 -44228441 + (TA)n Simple_repeat Simple_repeat 1 166 0 204 164 66 0 chr18 42449124 42449185 -44228363 + (TTATA)n Simple_repeat Simple_repeat 5 69 0 406 58 122 6 chr18 42449185 42449341 -44228207 + (TA)n Simple_repeat Simple_repeat 1 174 0 267 134 37 0 chr18 42449387 42449469 -44228079 + (TA)n Simple_repeat Simple_repeat 2 86 0 323 192 14 14 chr18 42450075 42450148 -44227400 - L1PB4 LINE L1 -2 6154 6082 189 0 0 0 chr18 42453239 42453260 -44224288 + (TTA)n Simple_repeat Simple_repeat 2 22 0 415 333 32 0 chr18 42453412 42453568 -44223980 + MER58A DNA MER1_type 4 164 0 22 0 0 0 chr18 42455416 42455438 -44222110 + AT_rich Low_complexity Low_complexity 1 22 0 1551 86 0 10 chr18 42455660 42455880 -44221668 + AluSg/x SINE Alu 87 304 0 361 296 92 20 chr18 42456491 42456643 -44220905 - MIR SINE MIR -27 235 73 468 316 62 43 chr18 42458315 42458524 -44219024 + MIR SINE MIR 24 236 -26 2226 194 38 56 chr18 42458544 42459174 -44218374 + LTR27 LTR ERV1 3 706 -128 271 138 103 0 chr18 42459194 42459252 -44218296 + LTR27 LTR ERV1 571 634 -2 23 54 0 0 chr18 42459258 42459295 -44218253 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr18 42461030 42461059 -44216489 + AT_rich Low_complexity Low_complexity 1 29 0 194 259 37 0 chr18 42461096 42461150 -44216398 + MIR SINE MIR 32 87 -121 4358 240 84 36 chr18 42462865 42464139 -44213409 - L1MDa LINE L1 -3376 3164 1782 337 39 39 0 chr18 42464139 42464190 -44213358 + (CA)n Simple_repeat Simple_repeat 2 54 0 4358 240 84 36 chr18 42464190 42464991 -44212557 - L1MDa LINE L1 -4758 1782 1021 554 223 91 5 chr18 42464989 42465209 -44212339 - L1MDa LINE L1 -4020 2520 2282 * 375 273 91 9 chr18 42465206 42465316 -44212232 - L1MDa LINE L1 -5523 1017 899 * 21 0 0 0 chr18 42465884 42465905 -44211643 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr18 42465970 42465991 -44211557 + AT_rich Low_complexity Low_complexity 1 21 0 604 343 146 29 chr18 42466877 42467160 -44210388 - L2 LINE L2 -9 3304 3056 251 67 44 0 chr18 42467160 42467205 -44210343 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 604 343 146 29 chr18 42467205 42467701 -44209847 - L2 LINE L2 -257 3056 2435 368 138 35 164 chr18 42467780 42467830 -44209718 + MSTB2 LTR MaLR 1 29 -399 2116 110 7 3 chr18 42467830 42468131 -44209417 + AluSq SINE Alu 12 313 0 368 138 35 164 chr18 42468131 42468196 -44209352 + MSTB2 LTR MaLR 29 101 -327 2418 108 8 16 chr18 42468196 42468574 -44208974 + THE1C LTR MaLR 1 375 0 9629 133 45 8 chr18 42468574 42470098 -44207450 + THE1C-int LTR MaLR 1 1580 0 2574 106 22 0 chr18 42470098 42470465 -44207083 + THE1C LTR MaLR 1 375 0 1042 275 41 7 chr18 42470479 42470774 -44206774 + MSTB2 LTR MaLR 153 457 0 5224 140 24 33 chr18 42471940 42472263 -44205285 - L1PB3 LINE L1 -3 6151 5827 182 36 0 36 chr18 42472263 42472291 -44205257 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5224 140 24 33 chr18 42472291 42472313 -44205235 - L1PB3 LINE L1 -327 5827 5806 405 0 0 0 chr18 42472313 42472358 -44205190 + (TG)n Simple_repeat Simple_repeat 2 46 0 5224 140 24 33 chr18 42472358 42473225 -44204323 - L1PB3 LINE L1 -348 5806 4935 1686 239 75 51 chr18 42474125 42474754 -44202794 - LTR9B LTR ERV1 0 644 1 267 254 0 0 chr18 42474947 42475014 -44202534 + (ATG)n Simple_repeat Simple_repeat 2 68 0 212 333 39 16 chr18 42475016 42475145 -44202403 - MIR SINE MIR -11 251 120 1338 273 111 42 chr18 42475184 42476672 -44200876 - L1ME LINE L1 -4480 1600 31 23 0 0 0 chr18 42478755 42478778 -44198770 + AT_rich Low_complexity Low_complexity 1 23 0 254 344 0 10 chr18 42479242 42479338 -44198210 + GA-rich Low_complexity Low_complexity 4 98 0 207 0 0 0 chr18 42479350 42479373 -44198175 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 24 0 0 0 chr18 42479975 42479999 -44197549 + AT_rich Low_complexity Low_complexity 1 24 0 1488 256 86 22 chr18 42481841 42481996 -44195552 - MER119 DNA MER1_type -41 542 398 2163 122 0 0 chr18 42481996 42482300 -44195248 - AluSx SINE Alu -8 304 1 1488 256 86 22 chr18 42482300 42482643 -44194905 - MER119 DNA MER1_type -185 398 12 1592 131 37 64 chr18 42483037 42483365 -44194183 + L1MA5A LINE L1 5979 6297 0 23 33 0 0 chr18 42484572 42484602 -44192946 + AT_rich Low_complexity Low_complexity 1 30 0 7821 147 27 30 chr18 42484663 42486049 -44191499 - Tigger1 DNA MER2_type 0 2418 1037 4231 159 65 22 chr18 42486045 42486345 -44191203 - Tigger1 DNA MER2_type -1603 815 530 * 1370 204 10 52 chr18 42486345 42486654 -44190894 - AluJo SINE Alu -16 296 1 4231 159 65 22 chr18 42486654 42487134 -44190414 - Tigger1 DNA MER2_type -1888 530 1 2000 223 55 42 chr18 42488237 42488779 -44188769 + MER44D DNA MER2_type 2 605 0 202 71 24 24 chr18 42489166 42489208 -44188340 + (TTTTTA)n Simple_repeat Simple_repeat 5 46 0 21 36 0 0 chr18 42489325 42489353 -44188195 + AT_rich Low_complexity Low_complexity 1 28 0 305 354 29 24 chr18 42489408 42489614 -44187934 - L1M4 LINE L1 -2980 3166 2960 186 43 0 0 chr18 42490049 42490072 -44187476 + (TAA)n Simple_repeat Simple_repeat 2 24 0 291 54 0 0 chr18 42491288 42491325 -44186223 + (TG)n Simple_repeat Simple_repeat 2 38 0 208 135 0 0 chr18 42492747 42492784 -44184764 + (A)n Simple_repeat Simple_repeat 1 37 0 1550 248 22 17 chr18 42493106 42493514 -44184034 + LTR52 LTR ERVL 1 410 -11 2192 122 0 13 chr18 42493882 42494193 -44183355 + AluSq SINE Alu 1 307 -6 1279 224 21 67 chr18 42494575 42494964 -44182584 + MLT1A2 LTR MaLR 4 374 0 223 172 35 35 chr18 42496677 42496735 -44180813 + L2 LINE L2 3202 3259 -13 241 194 290 21 chr18 42497068 42497161 -44180387 - MER5A DNA MER1_type -37 152 35 519 230 67 7 chr18 42497213 42497348 -44180200 - MER5B DNA MER1_type -29 149 7 242 323 85 16 chr18 42499849 42500038 -44177510 + L2 LINE L2 2531 2732 -582 1416 186 9 78 chr18 42500048 42500203 -44177345 + L1MB4 LINE L1 5835 5954 -226 1510 185 94 21 chr18 42500203 42500543 -44177005 + MLT1A1 LTR MaLR 1 365 0 1416 186 9 78 chr18 42500543 42500732 -44176816 + L1MB4 LINE L1 5954 6155 -25 1214 128 10 0 chr18 42500843 42501047 -44176501 - L1MA1 LINE L1 0 6302 6097 245 350 93 49 chr18 42501073 42501501 -44176047 + L2 LINE L2 2858 3304 -9 202 302 19 0 chr18 42501967 42502020 -44175528 - MIR SINE MIR -182 80 27 338 61 20 0 chr18 42502031 42502080 -44175468 + (TG)n Simple_repeat Simple_repeat 2 51 0 2721 3 0 10 chr18 42502213 42502517 -44175031 + AluYa5 SINE Alu 1 301 -10 442 216 60 75 chr18 42504182 42504381 -44173167 - ORSL DNA AcHobo 0 275 80 209 214 57 0 chr18 42504932 42505002 -44172546 + (TCTA)n Simple_repeat Simple_repeat 4 77 0 1886 139 0 4 chr18 42508077 42508358 -44169190 + AluSc SINE Alu 1 280 -29 202 159 45 0 chr18 42508958 42509002 -44168546 + CT-rich Low_complexity Low_complexity 4 49 0 23 0 0 0 chr18 42509337 42509360 -44168188 + AT_rich Low_complexity Low_complexity 1 23 0 249 375 22 13 chr18 42509632 42509864 -44167684 + L2 LINE L2 2827 3060 -212 180 0 0 0 chr18 42510495 42510515 -44167033 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 405 328 8 32 chr18 42511873 42511998 -44165550 - MIR SINE MIR -67 141 20 250 374 50 65 chr18 42512123 42512463 -44165085 + L2 LINE L2 2933 3267 -5 306 304 52 17 chr18 42512703 42512818 -44164730 + MIR SINE MIR 90 208 -54 2848 13 0 0 chr18 42513057 42513368 -44164180 + AluYa5 SINE Alu 1 311 0 379 297 137 33 chr18 42513458 42513670 -44163878 + MIR SINE MIR 15 248 -14 431 306 14 28 chr18 42514094 42514238 -44163310 - MIR SINE MIR -118 144 3 297 183 0 0 chr18 42516342 42516402 -44161146 + (CATATA)n Simple_repeat Simple_repeat 1 60 0 205 261 31 15 chr18 42516615 42516680 -44160868 + L2 LINE L2 3201 3266 -6 219 282 42 0 chr18 42517778 42517849 -44159699 + L2 LINE L2 3198 3271 -1 2782 139 11 32 chr18 42518486 42518955 -44158593 - LOR1b LTR ERV1 0 461 3 267 31 0 0 chr18 42519866 42519898 -44157650 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 184 318 127 73 chr18 42520101 42520211 -44157337 + L2 LINE L2 3197 3312 -1 23 0 0 0 chr18 42520485 42520508 -44157040 + AT_rich Low_complexity Low_complexity 1 23 0 983 82 0 54 chr18 42520913 42521060 -44156488 + MER85 DNA T2_type 1 139 0 1552 94 0 33 chr18 42521095 42521338 -44156210 - AluSg/x SINE Alu 0 311 76 213 39 0 0 chr18 42521346 42521372 -44156176 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2196 86 3 52 chr18 42521632 42521957 -44155591 - AluY SINE Alu 0 311 3 1757 185 22 5 chr18 42522434 42522801 -44154747 + L1MA8 LINE L1 5907 6279 -12 310 306 91 73 chr18 42523014 42523687 -44153861 + L1ME LINE L1 2144 2828 -3318 1436 202 19 41 chr18 42523821 42524138 -44153410 + AluJo SINE Alu 3 312 0 1837 162 0 0 chr18 42524219 42524491 -44153057 + AluSx SINE Alu 4 275 -37 2445 80 0 0 chr18 42524506 42524806 -44152742 + AluSq SINE Alu 1 300 -13 745 295 119 16 chr18 42525314 42525626 -44151922 - LTR16C LTR ERVL -4 487 144 294 273 39 19 chr18 42526390 42526544 -44151004 + (CATATA)n Simple_repeat Simple_repeat 4 160 0 736 245 154 0 chr18 42526550 42526906 -44150642 + MER63 DNA MER1_type 6 1050 -11 197 294 29 0 chr18 42526935 42527003 -44150545 + MIR SINE MIR 167 236 -26 320 286 67 82 chr18 42527058 42527533 -44150015 + L1ME LINE L1 4864 5331 -815 445 312 35 9 chr18 42527561 42527807 -44149741 + L1ME LINE L1 5436 5649 -472 23 0 0 0 chr18 42527949 42527972 -44149576 + AT_rich Low_complexity Low_complexity 1 23 0 983 82 0 54 chr18 42528598 42528745 -44148803 + MER85 DNA T2_type 1 139 0 1552 94 0 33 chr18 42528780 42529023 -44148525 - AluSg/x SINE Alu 0 309 74 213 39 0 0 chr18 42529031 42529057 -44148491 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2382 59 3 47 chr18 42529324 42529644 -44147904 - AluY SINE Alu -5 306 1 255 315 11 33 chr18 42530485 42530577 -44146971 - MIR SINE MIR -165 97 8 263 301 28 14 chr18 42531751 42531894 -44145654 + GA-rich Low_complexity Low_complexity 1 145 0 856 94 25 19 chr18 42532964 42533124 -44144424 + (TTTC)n Simple_repeat Simple_repeat 4 164 0 841 320 95 23 chr18 42533448 42533996 -44143552 + L2 LINE L2 2492 3083 -230 1094 54 8 0 chr18 42534585 42534714 -44142834 - AluY SINE Alu -181 130 1 2156 175 49 12 chr18 42535213 42535624 -44141924 + MSTB LTR MaLR 1 426 0 7817 202 23 21 chr18 42535624 42537272 -44140276 + MSTB-int LTR MaLR 1 1651 0 2201 202 17 7 chr18 42537272 42537692 -44139856 + MSTB LTR MaLR 1 424 -2 331 253 13 0 chr18 42537903 42537978 -44139570 - MER5A DNA MER1_type -109 80 5 486 0 0 0 chr18 42539425 42539479 -44138069 + (TG)n Simple_repeat Simple_repeat 2 55 0 701 286 28 9 chr18 42539801 42540014 -44137534 + MIR SINE MIR 46 262 0 21 36 0 0 chr18 42541451 42541479 -44136069 + AT_rich Low_complexity Low_complexity 1 28 0 286 355 27 0 chr18 42542048 42542158 -44135390 + MIR3 SINE MIR 42 154 -54 2031 274 87 14 chr18 42542314 42542559 -44134989 - L1ME1 LINE L1 -10 6139 5913 785 290 18 0 chr18 42542559 42542776 -44134772 + MER58A DNA MER1_type 1 221 -3 2031 274 87 14 chr18 42542776 42543301 -44134247 - L1ME1 LINE L1 -236 5913 5313 3157 264 81 45 chr18 42543305 42545205 -44132343 - L1ME1 LINE L1 -879 5250 3185 294 296 79 13 chr18 42545204 42545356 -44132192 - L1MC/D LINE L1 -2275 5533 5372 * 7765 202 29 7 chr18 42545357 42546390 -44131158 + L1PA15 LINE L1 3603 4611 -1554 2504 32 0 0 chr18 42546390 42546727 -44130821 + AluY SINE Alu 1 337 0 7765 202 29 7 chr18 42546727 42548241 -44129307 + L1PA15 LINE L1 4611 6163 -2 482 198 20 0 chr18 42548564 42548665 -44128883 - FLAM_A SINE Alu -7 135 33 208 143 0 0 chr18 42549043 42549078 -44128470 + (TA)n Simple_repeat Simple_repeat 2 36 0 5696 109 27 15 chr18 42549273 42549631 -44127917 - L1PB1 LINE L1 -1 6150 5798 234 0 0 0 chr18 42549631 42549657 -44127891 + (TG)n Simple_repeat Simple_repeat 2 27 0 5696 109 27 15 chr18 42549657 42550330 -44127218 - L1PB1 LINE L1 -353 5798 5103 8372 211 9 13 chr18 42550350 42552312 -44125236 + L1 LINE L1 3141 5094 -1052 28 48 0 0 chr18 42552435 42552477 -44125071 + AT_rich Low_complexity Low_complexity 1 42 0 1228 189 104 35 chr18 42552477 42552757 -44124791 - MER46B DNA MER2_type -2495 236 53 1154 220 95 0 chr18 42552757 42552871 -44124677 + AluJo SINE Alu 1 103 -199 200 33 0 33 chr18 42552871 42552901 -44124647 + (CAAAA)n Simple_repeat Simple_repeat 5 33 0 1154 220 95 0 chr18 42552901 42553059 -44124489 + AluJo SINE Alu 103 299 -3 1228 189 104 35 chr18 42553059 42553116 -44124432 - MER46B DNA MER2_type -2678 53 1 309 180 67 22 chr18 42553116 42553156 -44124392 + MER46A DNA MER2_type 146 189 -47 213 39 0 0 chr18 42553408 42553434 -44124114 + (T)n Simple_repeat Simple_repeat 1 26 0 1391 130 58 5 chr18 42553444 42553667 -44123881 - AluSx SINE Alu -77 235 1 406 323 86 5 chr18 42553679 42553899 -44123649 - L1ME1 LINE L1 -2982 3147 2910 6963 190 31 6 chr18 42553913 42556356 -44121192 - L1MA4A LINE L1 -4 7361 4857 * 9679 220 44 36 chr18 42556352 42560149 -44117399 - L1MA4A LINE L1 -3249 3959 16 1640 144 20 63 chr18 42560891 42561239 -44116309 - MER47A DNA MER2_type -25 341 9 239 65 0 0 chr18 42561442 42561473 -44116075 + MLT1J1 LTR MaLR 71 101 -345 328 337 37 43 chr18 42561748 42561935 -44115613 - L1ME1 LINE L1 -4862 1257 1072 1004 201 0 16 chr18 42562055 42562249 -44115299 + MLT1B LTR MaLR 1 191 -199 336 83 0 0 chr18 42562249 42562297 -44115251 - MADE1 DNA Mariner 0 80 33 1960 166 7 59 chr18 42562307 42562711 -44114837 - MLT1B LTR MaLR -2 388 6 1281 173 0 0 chr18 42562713 42562921 -44114627 + MLT1B LTR MaLR 183 390 0 580 285 134 32 chr18 42562925 42563178 -44114370 - LTR16C LTR ERVL -124 367 89 875 232 45 122 chr18 42563351 42563859 -44113689 - MER31-int LTR ERV1 -1286 3650 3182 1691 187 25 3 chr18 42563927 42564280 -44113268 - MER46B DNA MER2_type 0 236 1 1849 114 7 21 chr18 42564791 42565071 -44112477 + AluSc SINE Alu 24 299 -10 353 259 19 0 chr18 42565556 42565664 -44111884 - MER31-int LTR ERV1 -3793 1143 1034 555 321 26 21 chr18 42566149 42566342 -44111206 - MER92C LTR ERV1 -360 194 1 483 138 0 0 chr18 42566614 42566701 -44110847 + (TCC)n Simple_repeat Simple_repeat 3 89 0 563 247 77 60 chr18 42567744 42567979 -44109569 + MIR SINE MIR 2 240 -22 4294 187 33 52 chr18 42568023 42569170 -44108378 + L1MA9 LINE L1 5043 6164 -148 329 0 24 0 chr18 42569170 42569211 -44108337 + (CA)n Simple_repeat Simple_repeat 1 42 0 4294 187 33 52 chr18 42569211 42569316 -44108232 + L1MA9 LINE L1 6164 6270 -42 185 355 22 58 chr18 42569355 42569493 -44108055 + MER5A DNA MER1_type 1 133 -56 29 60 0 0 chr18 42569545 42569595 -44107953 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr18 42569603 42569624 -44107924 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr18 42569694 42569716 -44107832 + (TA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr18 42570556 42570577 -44106971 + AT_rich Low_complexity Low_complexity 1 21 0 326 301 44 29 chr18 42571545 42571681 -44105867 - MIR SINE MIR -76 186 49 315 342 67 0 chr18 42571871 42571991 -44105557 - L2 LINE L2 -3 3269 3142 198 370 59 35 chr18 42572300 42572503 -44105045 - L2 LINE L2 -463 2851 2644 2337 81 0 0 chr18 42572528 42572825 -44104723 + AluY SINE Alu 1 297 -14 189 143 95 24 chr18 42573102 42573144 -44104404 - MIR SINE MIR -98 164 120 743 233 33 83 chr18 42574137 42574437 -44103111 - L1ME1 LINE L1 -81 6085 5801 * 2109 178 42 82 chr18 42574417 42575013 -44102535 - L1MB8 LINE L1 -2 6176 5605 1163 255 53 57 chr18 42575015 42575521 -44102027 - L1ME1 LINE L1 -344 5822 5319 1288 214 0 48 chr18 42575533 42575822 -44101726 - AluJo SINE Alu -32 280 6 1573 239 65 33 chr18 42575859 42576491 -44101057 - L1ME1 LINE L1 -880 5266 4615 411 183 0 0 chr18 42576921 42577003 -44100545 + (TATG)n Simple_repeat Simple_repeat 3 84 0 1100 247 125 10 chr18 42577016 42577320 -44100228 - MER2 DNA MER2_type 0 345 7 1314 235 34 9 chr18 42577493 42577817 -44099731 - L1 LINE L1 -1608 4538 4207 555 83 0 12 chr18 42577817 42577901 -44099647 + L1PA16 LINE L1 6081 6163 -3 264 251 48 24 chr18 42578394 42578561 -44098987 + L1MC/D LINE L1 5129 5299 -847 356 267 133 0 chr18 42578636 42578771 -44098777 + L1MC/D LINE L1 5351 5503 -2305 21 0 0 0 chr18 42578979 42579000 -44098548 + AT_rich Low_complexity Low_complexity 1 21 0 2350 96 0 0 chr18 42579078 42579379 -44098169 + AluSg SINE Alu 1 301 -9 4484 254 48 15 chr18 42579380 42581796 -44095752 + L1MA8 LINE L1 2462 4958 -2607 4975 195 26 6 chr18 42581804 42583469 -44094079 + L1MA8 LINE L1 6002 7698 -12 333 306 91 73 chr18 42583682 42584355 -44093193 + L1ME LINE L1 2144 2828 -3318 1431 199 19 41 chr18 42584489 42584806 -44092742 + AluJo SINE Alu 3 312 0 1808 162 0 0 chr18 42584887 42585159 -44092389 + AluSx SINE Alu 4 275 -37 2381 83 0 0 chr18 42585174 42585474 -44092074 + AluSq SINE Alu 1 300 -13 750 295 119 16 chr18 42585982 42586294 -44091254 - LTR16C LTR ERVL -4 487 144 294 273 39 19 chr18 42587058 42587212 -44090336 + (CATATA)n Simple_repeat Simple_repeat 4 160 0 744 247 154 0 chr18 42587218 42587574 -44089974 + MER63 DNA MER1_type 6 1049 -11 201 294 29 0 chr18 42587603 42587671 -44089877 + MIR SINE MIR 167 236 -26 330 286 67 82 chr18 42587726 42588201 -44089347 + L1ME LINE L1 4864 5331 -815 460 312 35 9 chr18 42588229 42588475 -44089073 + L1ME LINE L1 5436 5649 -472 23 0 0 0 chr18 42588617 42588640 -44088908 + AT_rich Low_complexity Low_complexity 1 23 0 858 283 171 14 chr18 42590146 42590585 -44086963 - MLT1J LTR MaLR -1 510 3 1435 207 226 19 chr18 42591004 42591429 -44086119 - MLT2B1 LTR ERVL -5 515 3 27 0 0 0 chr18 42591676 42591703 -44085845 + AT_rich Low_complexity Low_complexity 1 27 0 1815 147 10 45 chr18 42591782 42592096 -44085452 + AluSx SINE Alu 1 303 -9 183 80 0 0 chr18 42592103 42592128 -44085420 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 206 191 0 24 chr18 42593131 42593173 -44084375 + (TA)n Simple_repeat Simple_repeat 2 42 0 3967 213 75 22 chr18 42593391 42594415 -44083133 - Tigger6a DNA MER2_type -5 1078 1 1059 257 104 41 chr18 42594506 42595231 -44082317 - L1ME3A LINE L1 -10 6160 5394 2028 221 7 5 chr18 42595307 42595750 -44081798 - L1MD3 LINE L1 -163 7832 7389 432 242 11 0 chr18 42595756 42595851 -44081697 - MLT1F1 LTR MaLR -464 103 8 1109 239 43 43 chr18 42595856 42596279 -44081269 - L1MD3 LINE L1 -715 7280 6858 598 283 64 13 chr18 42596284 42596517 -44081031 - L1MCb LINE L1 -3412 3152 2908 2249 168 36 18 chr18 42596519 42597012 -44080536 + L1MA8 LINE L1 5744 6245 -46 1649 271 35 41 chr18 42597037 42597572 -44079976 + L1MA5 LINE L1 1 532 -6677 12676 213 34 15 chr18 42597581 42601219 -44076329 + L1MA5 LINE L1 2796 6498 -777 3592 181 50 5 chr18 42601231 42602004 -44075544 + L1MA5 LINE L1 6553 7360 -2 376 270 9 51 chr18 42602076 42602291 -44075257 - L1MCb LINE L1 -3650 2914 2709 1529 272 68 63 chr18 42602304 42604113 -44073435 - L1MCb LINE L1 -4106 2639 615 248 216 0 20 chr18 42604656 42604707 -44072841 + Alu SINE Alu 245 294 -8 295 227 15 0 chr18 42604861 42604927 -44072621 - FLAM_A SINE Alu -5 128 62 22 0 0 0 chr18 42605954 42605976 -44071572 + AT_rich Low_complexity Low_complexity 1 22 0 180 97 0 0 chr18 42606170 42606201 -44071347 + (T)n Simple_repeat Simple_repeat 1 31 0 1545 166 99 81 chr18 42608224 42608646 -44068902 + MSTB1 LTR MaLR 3 432 0 32 26 0 0 chr18 42609817 42609856 -44067692 + AT_rich Low_complexity Low_complexity 1 39 0 378 286 28 4 chr18 42610739 42610856 -44066692 + MIR SINE MIR 35 154 -62 778 235 107 0 chr18 42611164 42611351 -44066197 + MER63A DNA MER1_type 1 207 -3 680 280 95 50 chr18 42616050 42616337 -44061211 - MLT1G1 LTR MaLR -38 557 180 2382 75 0 25 chr18 42616614 42616933 -44060615 - AluY SINE Alu 0 311 1 867 276 59 50 chr18 42617737 42618239 -44059309 - MLT1H1 LTR MaLR -2 553 1 32 81 0 0 chr18 42620475 42620549 -44056999 + AT_rich Low_complexity Low_complexity 1 74 0 1144 211 83 40 chr18 42620567 42620894 -44056654 + MER58B DNA MER1_type 1 341 0 1124 216 140 11 chr18 42622041 42622305 -44055243 + AluJo SINE Alu 2 299 -3 425 326 42 5 chr18 42623438 42623628 -44053920 - MIR SINE MIR -1 261 65 225 417 15 52 chr18 42623774 42624045 -44053503 + L2 LINE L2 2716 2976 -338 23 54 0 0 chr18 42624228 42624265 -44053283 + AT_rich Low_complexity Low_complexity 1 37 0 1279 251 155 31 chr18 42624587 42625065 -44052483 + MLT1E LTR MaLR 30 566 -27 21 0 0 0 chr18 42625069 42625090 -44052458 + AT_rich Low_complexity Low_complexity 1 21 0 225 0 0 0 chr18 42625517 42625542 -44052006 + (TG)n Simple_repeat Simple_repeat 2 26 0 255 103 0 0 chr18 42625937 42625976 -44051572 + (TG)n Simple_repeat Simple_repeat 2 40 0 203 250 33 0 chr18 42626061 42626121 -44051427 + (TA)n Simple_repeat Simple_repeat 2 63 0 392 266 54 33 chr18 42626905 42627089 -44050459 - MLT1J2 LTR MaLR 0 450 263 2172 93 0 23 chr18 42627855 42628165 -44049383 - AluY SINE Alu -8 303 1 23 0 0 0 chr18 42628588 42628611 -44048937 + AT_rich Low_complexity Low_complexity 1 23 0 183 364 11 11 chr18 42629139 42629227 -44048321 - L3 LINE CR1 -321 1256 1169 1721 108 108 4 chr18 42630844 42631136 -44046412 + AluSq SINE Alu 1 319 0 213 121 0 0 chr18 42631384 42631417 -44046131 + (A)n Simple_repeat Simple_repeat 1 33 0 25 75 0 0 chr18 42631590 42631643 -44045905 + AT_rich Low_complexity Low_complexity 1 53 0 462 36 0 0 chr18 42631843 42631899 -44045649 + (CA)n Simple_repeat Simple_repeat 2 57 0 4791 93 9 6 chr18 42632245 42632901 -44044647 + PABL_A LTR ERV1 1 658 -2 2554 119 3 11 chr18 42634190 42634568 -44042980 + THE1C LTR MaLR 1 375 0 181 258 135 34 chr18 42634574 42634663 -44042885 + L2 LINE L2 2699 2796 -518 341 312 37 18 chr18 42634732 42634841 -44042707 + MER5A DNA MER1_type 68 178 0 1929 145 18 57 chr18 42634931 42635158 -44042390 + THE1C LTR MaLR 1 208 -167 216 0 0 0 chr18 42635158 42635182 -44042366 + (TC)n Simple_repeat Simple_repeat 1 24 0 1929 145 18 57 chr18 42635182 42635341 -44042207 + THE1C LTR MaLR 208 372 -3 318 329 106 21 chr18 42635357 42635594 -44041954 + L2 LINE L2 2951 3207 -106 223 336 53 15 chr18 42636709 42636840 -44040708 + L2 LINE L2 3178 3313 0 21 57 0 0 chr18 42636983 42637018 -44040530 + AT_rich Low_complexity Low_complexity 1 35 0 310 106 0 165 chr18 42637482 42637567 -44039981 + L1PB4 LINE L1 6082 6152 -4 270 346 78 39 chr18 42637612 42637863 -44039685 + L2 LINE L2 2779 3036 -277 304 363 24 18 chr18 42640728 42640896 -44036652 + L2 LINE L2 2914 3082 -190 390 289 232 14 chr18 42641246 42641457 -44036091 - MIR SINE MIR 0 262 6 482 219 8 34 chr18 42643106 42643225 -44034323 - L1MD3 LINE L1 -15 7980 7865 439 241 82 2 chr18 42643899 42644037 -44033511 + MIR SINE MIR 60 210 -52 545 356 19 84 chr18 42644723 42645200 -44032348 + L2 LINE L2 2827 3272 0 183 42 0 0 chr18 42645251 42645275 -44032273 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr18 42646186 42646209 -44031339 + AT_rich Low_complexity Low_complexity 1 23 0 68 34 0 0 chr18 42646764 42646853 -44030695 + AT_rich Low_complexity Low_complexity 1 89 0 2152 104 3 41 chr18 42647505 42647823 -44029725 + AluSg SINE Alu 1 306 -4 462 272 154 6 chr18 42648463 42648625 -44028923 - MER5A DNA MER1_type 0 189 4 184 354 62 18 chr18 42648909 42649022 -44028526 + L3 LINE CR1 185 302 -1275 215 374 54 24 chr18 42649108 42649274 -44028274 + L3 LINE CR1 431 601 -976 1848 164 41 0 chr18 42649329 42649647 -44027901 + MER2 DNA MER2_type 15 345 0 190 191 71 0 chr18 42651537 42651579 -44025969 - MIR SINE MIR -122 140 96 24 32 0 0 chr18 42651797 42651828 -44025720 + AT_rich Low_complexity Low_complexity 1 31 0 685 329 40 0 chr18 42652446 42652674 -44024874 - MIR SINE MIR -22 240 4 199 303 26 0 chr18 42652726 42652802 -44024746 - MIR SINE MIR -13 249 172 216 135 0 0 chr18 42654236 42654273 -44023275 + (TA)n Simple_repeat Simple_repeat 1 37 0 206 337 22 11 chr18 42654673 42654765 -44022783 - L2 LINE L2 -56 3257 3165 29 0 0 25 chr18 42655047 42655068 -44022480 + AT_rich Low_complexity Low_complexity 1 22 -17 1863 164 0 0 chr18 42655068 42655355 -44022193 - AluSx SINE Alu -25 287 1 29 0 0 25 chr18 42655355 42655373 -44022175 + AT_rich Low_complexity Low_complexity 22 39 0 303 284 55 18 chr18 42655839 42655948 -44021600 + MIR SINE MIR 118 230 -32 2140 114 0 25 chr18 42657417 42657734 -44019814 - AluSx SINE Alu -3 309 1 440 213 16 8 chr18 42659706 42659828 -44017720 - L1MA4 LINE L1 -6 6294 6172 216 111 0 0 chr18 42660317 42660353 -44017195 + (TTGG)n Simple_repeat Simple_repeat 4 39 0 1202 153 22 9 chr18 42660600 42660822 -44016726 + L1MA5A LINE L1 6073 6297 0 425 33 0 17 chr18 42661176 42661236 -44016312 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 1667 99 40 4 chr18 42661238 42661490 -44016058 - L1PB1 LINE L1 -13 6138 5878 1273 55 0 0 chr18 42661490 42661653 -44015895 - L1PA4 LINE L1 0 6155 5993 3970 161 26 23 chr18 42661665 42662697 -44014851 - L1PB1 LINE L1 -260 5891 4860 900 360 126 33 chr18 42662775 42663779 -44013769 + L3 LINE CR1 455 1551 -26 186 43 0 0 chr18 42666131 42666154 -44011394 + (CAT)n Simple_repeat Simple_repeat 1 23 0 26192 58 2 1 chr18 42668149 42671549 -44005999 + L1P LINE L1 1316 4717 -1429 577 326 44 14 chr18 42672594 42672826 -44004722 - MIR SINE MIR -3 259 21 657 340 44 8 chr18 42675014 42675264 -44002284 + MIR SINE MIR 4 262 0 317 332 70 57 chr18 42675363 42675661 -44001887 + L1MC/D LINE L1 5255 5556 -2252 632 261 25 13 chr18 42675883 42676040 -44001508 - MER8 DNA MER2_type -79 160 2 225 314 25 0 chr18 42676055 42676173 -44001375 - L1ME LINE L1 -292 5829 5709 311 318 71 48 chr18 42678660 42678786 -43998762 - MIR3 SINE MIR -35 173 45 207 194 0 0 chr18 42679257 42679293 -43998255 + (CATATA)n Simple_repeat Simple_repeat 3 38 0 187 377 0 38 chr18 42682084 42682190 -43995358 - MIR SINE MIR -65 143 42 534 305 32 11 chr18 42683300 42683487 -43994061 - MIR SINE MIR -9 253 63 3687 259 75 45 chr18 42684314 42687813 -43989735 + L1MD2 LINE L1 2725 6335 -24 850 249 75 88 chr18 42687878 42688554 -43988994 - L1M4 LINE L1 -2154 3992 3309 1481 190 0 32 chr18 42688554 42688833 -43988715 + AluJo SINE Alu 1 270 -42 222 37 0 0 chr18 42688835 42688862 -43988686 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 850 249 75 88 chr18 42688862 42688910 -43988638 - L1M4 LINE L1 -2838 3308 3274 4899 177 11 27 chr18 42688934 42689955 -43987593 - L1MA5 LINE L1 0 6300 5297 470 183 219 0 chr18 42690134 42690271 -43987277 - L1MA8 LINE L1 -6 6285 6119 2391 141 5 2 chr18 42690324 42690721 -43986827 - L1PB1 LINE L1 -8 6143 5746 1955 160 0 10 chr18 42690722 42691028 -43986520 + L1PA12 LINE L1 539 841 -6740 * 8249 184 9 7 chr18 42691018 42693285 -43984263 + L1PA12 LINE L1 1807 4084 -3500 2513 116 8 19 chr18 42693288 42693659 -43983889 - MER1A DNA MER1_type -4 525 159 246 254 85 0 chr18 42693747 42693806 -43983742 - L2 LINE L2 -8 3305 3242 340 353 64 30 chr18 42694081 42694347 -43983201 + MLT1J LTR MaLR 88 362 -149 195 42 0 0 chr18 42695673 42695697 -43981851 + (TC)n Simple_repeat Simple_repeat 2 25 0 234 0 0 0 chr18 42695882 42695908 -43981640 + (TG)n Simple_repeat Simple_repeat 2 27 0 1836 117 49 0 chr18 42696726 42697032 -43980516 + AluSx SINE Alu 6 324 0 239 274 68 14 chr18 42697395 42697468 -43980080 + L2 LINE L2 3196 3272 0 26 30 0 0 chr18 42697710 42697743 -43979805 + AT_rich Low_complexity Low_complexity 1 33 0 2097 222 12 54 chr18 42698587 42699127 -43978421 + Tigger7 DNA MER2_type 2 2480 -7 1009 319 75 12 chr18 42699148 42699704 -43977844 - MLT2F LTR ERVL -7 656 29 573 170 7 26 chr18 42700073 42700226 -43977322 + GA-rich Low_complexity Low_complexity 3 152 0 350 327 18 0 chr18 42701586 42701699 -43975849 + L2 LINE L2 3199 3313 0 1197 276 58 60 chr18 42702075 42702622 -43974926 - MLT1H LTR MaLR 0 549 4 432 344 84 35 chr18 42702803 42703392 -43974156 - L2 LINE L2 -38 3275 2633 420 296 30 20 chr18 42703405 42703608 -43973940 - L2 LINE L2 -652 2662 2458 377 289 25 8 chr18 42703623 42703744 -43973804 - L2 LINE L2 -979 2335 2213 1922 162 128 10 chr18 42703744 42704127 -43973421 + MSTA LTR MaLR 1 428 0 800 252 29 5 chr18 42704529 42704739 -43972809 + L1ME1 LINE L1 34 248 -6148 1864 270 56 24 chr18 42704745 42705603 -43971945 + L1ME1 LINE L1 5239 6217 -18 1970 128 3 0 chr18 42705613 42705956 -43971592 - AluSx SINE Alu 0 344 1 23 0 0 0 chr18 42705963 42705986 -43971562 + AT_rich Low_complexity Low_complexity 1 23 0 35 24 0 0 chr18 42706214 42706256 -43971292 + AT_rich Low_complexity Low_complexity 1 42 0 23 33 0 0 chr18 42706326 42706356 -43971192 + AT_rich Low_complexity Low_complexity 1 30 0 327 177 0 0 chr18 42706385 42706447 -43971101 + (TA)n Simple_repeat Simple_repeat 2 63 0 213 108 0 0 chr18 42706447 42706484 -43971064 + (CAGAGA)n Simple_repeat Simple_repeat 4 40 0 186 200 0 83 chr18 42706664 42706724 -43970824 + MIR SINE MIR 178 232 -30 263 355 24 8 chr18 42706965 42707089 -43970459 + L3 LINE CR1 469 594 -983 211 205 0 0 chr18 42709606 42709645 -43967903 + (TATATG)n Simple_repeat Simple_repeat 6 44 0 360 335 18 24 chr18 42710781 42710948 -43966600 + L2 LINE L2 2455 2620 -694 2182 173 8 43 chr18 42710965 42711433 -43966115 + L1MB7 LINE L1 5718 6169 -15 206 292 42 42 chr18 42714086 42714182 -43963366 - L2 LINE L2 -2 3311 3216 1712 255 45 6 chr18 42715093 42715587 -43961961 + LTR40a LTR ERVL 3 515 -4 186 43 0 0 chr18 42715588 42715611 -43961937 + (CA)n Simple_repeat Simple_repeat 2 24 0 222 37 0 0 chr18 42715754 42715781 -43961767 + (TG)n Simple_repeat Simple_repeat 1 27 0 196 169 12 60 chr18 42715781 42715864 -43961684 + GA-rich Low_complexity Low_complexity 2 80 0 222 37 0 0 chr18 42717118 42717145 -43960403 + (T)n Simple_repeat Simple_repeat 1 27 0 694 254 37 5 chr18 42718603 42718792 -43958756 - MER20 DNA MER1_type -1 218 24 186 342 9 70 chr18 42719506 42719620 -43957928 - L2 LINE L2 -28 3244 3138 233 183 33 0 chr18 42719840 42719900 -43957648 + L1MC4 LINE L1 6642 6703 -1339 320 321 92 0 chr18 42720824 42720955 -43956593 + MIR3 SINE MIR 65 207 -1 270 336 67 10 chr18 42722596 42722700 -43954848 + MIR3 SINE MIR 55 164 -44 2156 337 95 50 chr18 42722885 42724670 -43952878 + L2 LINE L2 1109 2974 -340 235 298 19 19 chr18 42725708 42725866 -43951682 + (TA)n Simple_repeat Simple_repeat 2 159 0 4004 186 17 3 chr18 42726132 42726854 -43950694 + MER44D DNA MER2_type 2 605 0 305 294 101 0 chr18 42726906 42727015 -43950533 - MER70B LTR ERVL -18 560 441 207 0 0 0 chr18 42728808 42728831 -43948717 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 653 274 34 0 chr18 42729433 42729612 -43947936 + MER5A DNA MER1_type 5 189 0 27 0 0 0 chr18 42729660 42729687 -43947861 + AT_rich Low_complexity Low_complexity 1 27 0 659 240 43 43 chr18 42729873 42730106 -43947442 + MER106A DNA MER1_type 1 233 -3 423 285 12 64 chr18 42730461 42730633 -43946915 - L2 LINE L2 0 3313 3151 1232 112 71 58 chr18 42730646 42730870 -43946678 + MER30 DNA MER1_type 4 230 0 273 293 12 24 chr18 42732178 42732260 -43945288 - L2 LINE L2 -1394 1920 1840 216 286 0 0 chr18 42732351 42732400 -43945148 + (TATATG)n Simple_repeat Simple_repeat 3 51 0 396 305 77 32 chr18 42732581 42732827 -43944721 - L1 LINE L1 -2817 3329 3073 237 65 0 0 chr18 42732828 42732859 -43944689 + (T)n Simple_repeat Simple_repeat 1 31 0 27 49 0 0 chr18 42734016 42734057 -43943491 + AT_rich Low_complexity Low_complexity 1 41 0 284 282 26 13 chr18 42734391 42734469 -43943079 + MIR SINE MIR 68 146 -62 240 200 0 0 chr18 42734588 42734648 -43942900 + A-rich Low_complexity Low_complexity 1 60 0 337 233 256 8 chr18 42735558 42735687 -43941861 + MIR SINE MIR 102 262 0 294 262 91 7 chr18 42736880 42737018 -43940530 - MLT1I LTR MaLR -11 418 289 1674 242 9 3 chr18 42737018 42737365 -43940183 + MLT2C1 LTR ERVL 1 349 -48 460 267 111 34 chr18 42737526 42737750 -43939798 - MLT1J1 LTR MaLR -214 236 3 29 78 0 0 chr18 42737763 42737827 -43939721 + AT_rich Low_complexity Low_complexity 1 64 0 193 356 115 58 chr18 42738103 42738589 -43938959 - L2 LINE L2 -402 2912 2399 22 0 0 0 chr18 42739503 42739525 -43938023 + AT_rich Low_complexity Low_complexity 1 22 0 224 398 99 6 chr18 42740090 42740251 -43937297 + MIR3 SINE MIR 18 193 -15 184 328 62 0 chr18 42740620 42740684 -43936864 + MIR SINE MIR 76 143 -119 2068 273 64 34 chr18 42741467 42742309 -43935239 + L1ME3A LINE L1 5290 6156 -14 2104 118 10 0 chr18 42742623 42742927 -43934621 + AluSx SINE Alu 1 307 -5 21 36 0 0 chr18 42742997 42743025 -43934523 + AT_rich Low_complexity Low_complexity 1 28 0 1049 241 97 56 chr18 42743093 42743197 -43934351 + L1MC5 LINE L1 7246 7344 -617 2064 109 3 10 chr18 42743197 42743499 -43934049 + AluSc SINE Alu 1 300 -9 1049 241 97 56 chr18 42743499 42744053 -43933495 + L1MC5 LINE L1 7344 7931 -30 198 0 0 0 chr18 42744853 42744875 -43932673 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 228 131 16 66 chr18 42745165 42745226 -43932322 + T-rich Low_complexity Low_complexity 2 59 0 211 255 0 0 chr18 42746540 42746587 -43930961 + L2 LINE L2 3262 3308 -5 326 367 137 30 chr18 42746703 42747104 -43930444 - L2 LINE L2 -433 2881 2416 2240 208 21 11 chr18 42747104 42747571 -43929977 - MER70A LTR ERVL 0 472 1 326 367 137 30 chr18 42747571 42747665 -43929883 - L2 LINE L2 -898 2416 2333 258 303 40 29 chr18 42747737 42747912 -43929636 + MER117 DNA MER1_type 1 177 -20 926 146 139 66 chr18 42748261 42748562 -43928986 - MER33 DNA MER1_type 0 324 2 231 292 42 0 chr18 42749196 42749268 -43928280 - MLT1J LTR MaLR 0 511 437 22 0 0 0 chr18 42750127 42750149 -43927399 + AT_rich Low_complexity Low_complexity 1 22 0 1164 214 179 35 chr18 42750320 42750445 -43927103 + MSTB2 LTR MaLR 4 110 -347 315 0 0 0 chr18 42750445 42750480 -43927068 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1164 214 179 35 chr18 42750480 42750751 -43926797 + MSTB2 LTR MaLR 110 457 0 523 346 112 29 chr18 42750753 42751264 -43926284 - L3 LINE CR1 -40 1537 985 232 27 54 0 chr18 42751303 42751340 -43926208 + (CA)n Simple_repeat Simple_repeat 2 40 0 246 156 0 0 chr18 42751564 42751609 -43925939 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 3773 33 0 2 chr18 42751720 42752170 -43925378 + L1PA5 LINE L1 5698 6146 -8 243 88 0 0 chr18 42752643 42752677 -43924871 + (TG)n Simple_repeat Simple_repeat 2 35 0 57 28 0 0 chr18 42753390 42753461 -43924087 + AT_rich Low_complexity Low_complexity 1 71 0 243 311 92 10 chr18 42753575 42753781 -43923767 + L1M4 LINE L1 4534 4756 -1390 1728 43 0 0 chr18 42754328 42754539 -43923009 - L1PA2 LINE L1 -5 6150 5940 2451 61 0 26 chr18 42755247 42755560 -43921988 - AluY SINE Alu -6 305 1 438 304 92 10 chr18 42755933 42756397 -43921151 - L1M4 LINE L1 -658 5585 5062 237 247 0 47 chr18 42756543 42756628 -43920920 - L1M4 LINE L1 -1328 4887 4807 323 300 42 46 chr18 42756726 42756861 -43920687 - L1M4 LINE L1 -1481 4734 4600 1699 114 4 12 chr18 42756861 42757115 -43920433 + AluSx SINE Alu 42 293 -19 323 300 42 46 chr18 42757115 42757262 -43920286 - L1M4 LINE L1 -1615 4600 4453 230 242 16 0 chr18 42757497 42757559 -43919989 - L1ME3A LINE L1 -13 6157 6095 329 235 12 0 chr18 42757582 42757663 -43919885 - L1MC2 LINE L1 -13 6331 6250 2858 249 45 39 chr18 42757676 42758479 -43919069 - L1MC3 LINE L1 -118 7667 6855 189 0 0 0 chr18 42758479 42758500 -43919048 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2858 249 45 39 chr18 42758500 42758669 -43918879 - L1MC3 LINE L1 -930 6855 6689 341 310 101 32 chr18 42758670 42759555 -43917993 - L1M4 LINE L1 -2206 4009 3044 1965 159 0 0 chr18 42759555 42759864 -43917684 + AluSg SINE Alu 1 309 -1 341 310 101 32 chr18 42759864 42759990 -43917558 - L1M4 LINE L1 -3171 3044 2928 7000 153 47 6 chr18 42760062 42761306 -43916242 + HSMAR2 DNA Mariner 2 1295 -7 226 276 63 69 chr18 42761314 42761488 -43916060 - L1M4 LINE L1 -3358 2857 2685 232 309 40 32 chr18 42761826 42761952 -43915596 - HAL1 LINE L1 -855 1652 1526 619 257 42 0 chr18 42762007 42762151 -43915397 + MLT1D LTR MaLR 1 150 -355 3318 263 55 57 chr18 42762151 42763743 -43913805 - L1M1 LINE L1 -838 6727 5137 1455 193 74 52 chr18 42763743 42764163 -43913385 + LTR3 LTR ERVK 1 429 0 3318 263 55 57 chr18 42764163 42764320 -43913228 - L1M1 LINE L1 -2428 5137 4981 246 216 0 0 chr18 42764325 42764376 -43913172 + CT-rich Low_complexity Low_complexity 2 52 0 2018 270 59 13 chr18 42764417 42765348 -43912200 - L1M1 LINE L1 -2582 4983 4010 2779 271 59 27 chr18 42765350 42766216 -43911332 - L1M4 LINE L1 -5164 1232 318 5998 129 16 18 chr18 42766216 42767186 -43910362 + LTR5 LTR ERVK 1 969 0 2779 271 59 27 chr18 42767186 42767478 -43910070 - L1M4 LINE L1 -6078 318 37 30 27 0 0 chr18 42768807 42768844 -43908704 + AT_rich Low_complexity Low_complexity 1 37 0 243 0 0 0 chr18 42769178 42769205 -43908343 + (TA)n Simple_repeat Simple_repeat 2 28 0 35 24 0 0 chr18 42769862 42769904 -43907644 + AT_rich Low_complexity Low_complexity 1 42 0 639 276 39 28 chr18 42771167 42771453 -43906095 + L1MCc LINE L1 1151 1439 -4984 28 48 0 0 chr18 42771454 42771496 -43906052 + AT_rich Low_complexity Low_complexity 1 42 0 1279 202 22 29 chr18 42771496 42771773 -43905775 - AluJo SINE Alu -30 282 8 972 226 4 42 chr18 42771783 42772022 -43905526 - AluJo SINE Alu -82 230 1 760 313 75 21 chr18 42772025 42772492 -43905056 + L1MCc LINE L1 1434 1945 -4996 240 35 0 0 chr18 42772492 42772521 -43905027 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 760 313 75 21 chr18 42772521 42772682 -43904866 + L1MCc LINE L1 1945 2096 -4845 1132 313 119 29 chr18 42772687 42773378 -43904170 + LTR41 LTR ERVL 6 758 -15 505 317 80 45 chr18 42773816 42774191 -43903357 + L2 LINE L2 2517 2904 -410 2180 255 95 61 chr18 42774224 42774778 -43902770 - L1M4 LINE L1 -3555 2827 2294 253 154 0 0 chr18 42774778 42774817 -43902731 - tRNA-Met-e tRNA tRNA -36 39 1 2180 255 95 61 chr18 42774817 42775961 -43901587 - L1M4 LINE L1 -4088 2294 1029 517 307 95 27 chr18 42775965 42776195 -43901353 - L1M1 LINE L1 -3955 3610 3397 333 0 0 0 chr18 42776195 42776232 -43901316 + (TG)n Simple_repeat Simple_repeat 2 38 0 517 307 95 27 chr18 42776232 42776694 -43900854 - L1M1 LINE L1 -4168 3397 2873 1212 161 144 71 chr18 42776694 42777077 -43900471 + MSTB1 LTR MaLR 1 432 0 1937 284 11 14 chr18 42777077 42777966 -43899582 - L1M2 LINE L1 -4362 2487 1612 226 375 31 19 chr18 42777999 42778159 -43899389 + L2 LINE L2 3096 3257 -56 375 423 36 22 chr18 42778260 42778534 -43899014 - L2 LINE L2 -527 2787 2510 541 294 34 0 chr18 42779391 42779537 -43898011 - MER45A DNA AcHobo 0 178 28 1952 120 116 71 chr18 42779678 42780085 -43897463 + MSTA LTR MaLR 2 426 -2 180 176 0 0 chr18 42780721 42780755 -43896793 + T-rich Low_complexity Low_complexity 1 34 0 225 297 71 58 chr18 42782629 42782784 -43894764 + MIR SINE MIR 51 207 -55 603 301 41 21 chr18 42782990 42783225 -43894323 + MIR SINE MIR 2 242 -20 1452 139 72 4 chr18 42783672 42783923 -43893625 - Tigger5 DNA MER2_type 0 2323 2056 23 0 0 0 chr18 42784645 42784668 -43892880 + AT_rich Low_complexity Low_complexity 1 23 0 2198 109 0 0 chr18 42784676 42784979 -43892569 + AluSc SINE Alu 1 303 -6 189 0 0 0 chr18 42785976 42785997 -43891551 + (A)n Simple_repeat Simple_repeat 1 21 0 286 352 93 16 chr18 42786355 42786537 -43891011 - L2 LINE L2 -341 2973 2778 248 232 0 130 chr18 42787644 42787782 -43889766 + MIR SINE MIR 86 205 -57 212 196 0 18 chr18 42789505 42789561 -43887987 + (TTATA)n Simple_repeat Simple_repeat 2 56 0 232 244 44 56 chr18 42790593 42790683 -43886865 + LTR48B LTR ERV1 1 89 -555 * 1439 210 87 56 chr18 42790670 42791084 -43886464 + MER39 LTR ERV1 261 687 -20 1058 275 75 21 chr18 42791415 42791750 -43885798 + MLT1A2 LTR MaLR 22 374 0 527 325 189 37 chr18 42791780 42792183 -43885365 + L2 LINE L2 2833 3296 -17 275 329 43 34 chr18 42794481 42794625 -43882923 + MIR SINE MIR 22 165 -57 24 0 0 0 chr18 42795418 42795442 -43882106 + AT_rich Low_complexity Low_complexity 1 24 0 275 395 54 6 chr18 42795908 42796075 -43881473 + L2 LINE L2 2707 2881 -433 359 299 88 0 chr18 42796779 42796916 -43880632 + L2 LINE L2 3165 3313 0 281 260 39 13 chr18 42798330 42798407 -43879141 - MER20B DNA MER1_type -628 155 77 483 63 0 0 chr18 42800073 42800136 -43877412 + (TG)n Simple_repeat Simple_repeat 2 64 0 288 300 93 31 chr18 42800791 42801499 -43876049 + L1ME LINE L1 822 1613 -4648 413 311 53 11 chr18 42801624 42801967 -43875581 + L1ME LINE L1 2604 2960 -3120 1470 249 59 7 chr18 42802020 42802458 -43875090 - LTR37B LTR ERV1 -2 466 6 626 317 20 0 chr18 42802995 42803194 -43874354 - MIR SINE MIR -25 237 35 271 176 15 15 chr18 42803833 42803901 -43873647 + (TA)n Simple_repeat Simple_repeat 2 69 0 952 255 127 99 chr18 42804031 42804568 -43872980 - MLT1G1 LTR MaLR 0 595 44 199 367 151 38 chr18 42804978 42805297 -43872251 - L2 LINE L2 -417 2897 2543 225 451 0 0 chr18 42805325 42805458 -43872090 - L2 LINE L2 -205 3067 2935 465 317 39 58 chr18 42805691 42805896 -43871652 + MIR SINE MIR 59 259 -3 1644 176 8 61 chr18 42806140 42806515 -43871033 + THE1A LTR MaLR 1 355 0 10664 102 34 1 chr18 42806515 42808045 -43869503 + THE1A-int LTR MaLR 1 1580 0 2576 97 8 0 chr18 42808045 42808397 -43869151 + THE1A LTR MaLR 1 355 0 26 0 0 0 chr18 42809151 42809177 -43868371 + AT_rich Low_complexity Low_complexity 1 26 0 414 330 80 18 chr18 42810773 42810997 -43866551 + MIR SINE MIR 9 246 -16 493 258 66 40 chr18 42811077 42811228 -43866320 - MER5B DNA MER1_type 0 178 24 555 290 15 0 chr18 42811228 42811359 -43866189 + MER5B DNA MER1_type 46 178 0 446 356 23 17 chr18 42811376 42811550 -43865998 + MER5B DNA MER1_type 1 175 -3 669 281 0 18 chr18 42811556 42811723 -43865825 - MER5A DNA MER1_type 0 189 26 1597 255 68 38 chr18 42811783 42812419 -43865129 + L1MC4 LINE L1 7244 7898 -144 25 31 0 0 chr18 42812471 42812503 -43865045 + AT_rich Low_complexity Low_complexity 1 32 0 233 369 49 33 chr18 42813175 42813297 -43864251 - L2 LINE L2 0 3272 3149 191 377 77 29 chr18 42813535 42813742 -43863806 - L2 LINE L2 -436 2878 2662 321 335 93 46 chr18 42813995 42814606 -43862942 - L2 LINE L2 -640 2674 2035 396 320 51 20 chr18 42814642 42814839 -43862709 + L2 LINE L2 2680 2882 -432 272 329 45 45 chr18 42814956 42815199 -43862349 + L2 LINE L2 3025 3267 -46 524 210 0 24 chr18 42815771 42815938 -43861610 + GA-rich Low_complexity Low_complexity 2 164 0 201 407 71 0 chr18 42816071 42816211 -43861337 - L2 LINE L2 -2084 1230 1081 414 0 0 0 chr18 42816798 42816844 -43860704 + (CA)n Simple_repeat Simple_repeat 2 47 0 22 35 0 0 chr18 42818741 42818770 -43858778 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr18 42819477 42819505 -43858043 + AT_rich Low_complexity Low_complexity 1 28 0 1152 154 32 0 chr18 42819702 42819923 -43857625 - L1MA8 LINE L1 -3 6288 6061 3515 95 32 4 chr18 42819923 42820426 -43857122 + L1PA8A LINE L1 5614 6131 0 9226 193 17 25 chr18 42820429 42822217 -43855331 - L1MA8 LINE L1 -221 6070 4269 1892 67 127 0 chr18 42822217 42822470 -43855078 + AluY SINE Alu 1 285 -26 9226 193 17 25 chr18 42822470 42823143 -43854405 - L1MA8 LINE L1 -2022 4269 3592 1873 149 51 0 chr18 42823143 42823439 -43854109 + AluSx SINE Alu 1 311 -1 9226 193 17 25 chr18 42823439 42823544 -43854004 - L1MA8 LINE L1 -2699 3592 3488 2379 60 0 13 chr18 42823544 42823884 -43853664 - AluY SINE Alu 0 336 1 9226 193 17 25 chr18 42823884 42824234 -43853314 - L1MA8 LINE L1 -2803 3488 3179 3122 164 23 7 chr18 42824333 42824931 -43852617 - L1MC2 LINE L1 -2 6342 5735 238 250 25 12 chr18 42826394 42826474 -43851074 + CT-rich Low_complexity Low_complexity 1 81 0 307 398 27 0 chr18 42826475 42826696 -43850852 - L2 LINE L2 -575 2739 2513 186 266 0 0 chr18 42827556 42827635 -43849913 + (TA)n Simple_repeat Simple_repeat 1 79 0 573 202 8 0 chr18 42827945 42828069 -43849479 - L1MA4 LINE L1 -11 6289 6165 3629 166 87 46 chr18 42828111 42829473 -43848075 - L1MA4 LINE L1 -115 6185 4745 36 0 0 0 chr18 42829490 42829526 -43848022 + AT_rich Low_complexity Low_complexity 1 36 0 22 70 0 0 chr18 42829583 42829626 -43847922 + AT_rich Low_complexity Low_complexity 1 43 0 654 265 44 6 chr18 42829626 42829807 -43847741 - MIR SINE MIR -55 207 20 353 338 66 25 chr18 42830047 42830245 -43847303 + L1MEd LINE L1 463 668 -5451 526 280 66 55 chr18 42830333 42831068 -43846480 + L1MEd LINE L1 793 1580 -4730 208 299 0 0 chr18 42831159 42831236 -43846312 + A-rich Low_complexity Low_complexity 5 81 0 465 118 13 0 chr18 42831735 42831811 -43845737 + MADE1 DNA Mariner 4 80 0 276 111 0 0 chr18 42831943 42831988 -43845560 + (CA)n Simple_repeat Simple_repeat 2 46 0 598 356 27 22 chr18 42832008 42832379 -43845169 - L1MEc LINE L1 -5985 411 39 290 298 0 19 chr18 42832566 42832670 -43844878 - MIR SINE MIR -1 261 160 741 276 9 49 chr18 42832685 42832910 -43844638 + MER58A DNA MER1_type 1 216 -8 198 0 0 0 chr18 42833269 42833291 -43844257 + (T)n Simple_repeat Simple_repeat 1 22 0 27 0 0 0 chr18 42833309 42833336 -43844212 + GC_rich Low_complexity Low_complexity 1 27 0 2563 49 0 7 chr18 42833471 42833775 -43843773 - AluSc SINE Alu -7 302 1 2597 209 19 19 chr18 42833942 42834474 -43843074 + MLT2B3 LTR ERVL 1 532 -22 192 125 0 0 chr18 42834491 42834523 -43843025 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 227 424 18 18 chr18 42834558 42834723 -43842825 - L2 LINE L2 0 3272 3108 212 366 117 20 chr18 42835236 42835534 -43842014 - L2 LINE L2 -1023 2291 1965 23 33 0 0 chr18 42837795 42837825 -43839723 + AT_rich Low_complexity Low_complexity 1 30 0 192 250 288 0 chr18 42839056 42839136 -43838412 - L2 LINE L2 -7 3265 3163 207 0 0 0 chr18 42840784 42840807 -43836741 + (TA)n Simple_repeat Simple_repeat 1 23 0 2596 189 30 51 chr18 42840812 42841067 -43836481 - L1MB7 LINE L1 -18 6166 5907 420 20 0 0 chr18 42841067 42841116 -43836432 + (TA)n Simple_repeat Simple_repeat 1 49 0 2596 189 30 51 chr18 42841116 42841532 -43836016 - L1MB7 LINE L1 -277 5907 5509 507 294 43 27 chr18 42842638 42842825 -43834723 - MLT2F LTR ERVL -199 464 275 1433 227 73 67 chr18 42842848 42843433 -43834115 - MLT1E LTR MaLR -4 589 1 331 292 88 0 chr18 42843438 42843575 -43833973 - MLT1E-int LTR MaLR -5 1366 1218 888 301 82 60 chr18 42844260 42845357 -43832191 - L2 LINE L2 0 3313 2185 24 0 0 0 chr18 42846211 42846235 -43831313 + AT_rich Low_complexity Low_complexity 1 24 0 568 307 65 33 chr18 42846381 42846725 -43830823 - LTR16A LTR ERVL -4 453 76 22 56 0 0 chr18 42847148 42847184 -43830364 + AT_rich Low_complexity Low_complexity 1 36 0 261 193 53 0 chr18 42847557 42847614 -43829934 + MER110 LTR ERV1 1 60 -431 621 224 0 0 chr18 42847636 42847752 -43829796 + MER82 DNA MER2_type 2 117 -536 207 0 0 0 chr18 42847760 42847783 -43829765 + (CA)n Simple_repeat Simple_repeat 2 24 0 2064 209 13 33 chr18 42847783 42848243 -43829305 + MER82 DNA MER2_type 203 653 0 1228 204 147 13 chr18 42848243 42848557 -43828991 + MER110 LTR ERV1 130 485 -6 1964 170 75 12 chr18 42848788 42849188 -43828360 - MSTB LTR MaLR -1 425 1 1164 239 80 109 chr18 42849412 42849989 -43827559 - MER68 LTR ERV1 -1 561 2 377 302 62 16 chr18 42850274 42850403 -43827145 + L2 LINE L2 3172 3306 -7 1384 191 4 27 chr18 42850881 42851143 -43826405 - AluJb SINE Alu -8 304 49 275 344 122 26 chr18 42851186 42851375 -43826173 + L3 LINE CR1 879 1085 -492 25 0 0 0 chr18 42851701 42851726 -43825822 + AT_rich Low_complexity Low_complexity 1 25 0 243 353 98 44 chr18 42851769 42851973 -43825575 + L3 LINE CR1 1306 1520 -57 1595 207 13 0 chr18 42852013 42852318 -43825230 + AluJb SINE Alu 2 310 -2 2403 178 13 5 chr18 42853726 42854216 -43823332 - L1MA6 LINE L1 -593 5707 5214 3153 169 27 15 chr18 42854216 42854252 -43823296 + L1MA6 LINE L1 5690 5724 -576 2744 144 9 0 chr18 42854252 42854676 -43822872 + MSTA LTR MaLR 1 428 0 3153 169 27 15 chr18 42854676 42855231 -43822317 + L1MA6 LINE L1 5724 6295 -5 1842 163 0 29 chr18 42855259 42855572 -43821976 + AluJo SINE Alu 1 304 -8 2370 85 7 3 chr18 42855750 42856056 -43821492 + AluY SINE Alu 5 311 0 205 179 0 0 chr18 42856482 42856521 -43821027 + (GTTTG)n Simple_repeat Simple_repeat 2 40 0 1526 207 36 12 chr18 42857262 42857591 -43819957 - MLT1A1 LTR MaLR -11 354 18 351 305 56 5 chr18 42857822 42858005 -43819543 - MIR SINE MIR -37 225 33 1662 154 54 0 chr18 42858053 42858333 -43819215 - AluJb SINE Alu -13 299 5 326 264 132 60 chr18 42859059 42859294 -43818254 - MLT1L LTR MaLR -353 262 11 457 321 48 12 chr18 42859377 42859542 -43818006 + MIR SINE MIR 19 189 -73 483 299 82 21 chr18 42859799 42860143 -43817405 + L1ME LINE L1 4905 5270 -876 277 297 81 51 chr18 42860248 42860484 -43817064 + L1ME LINE L1 5403 5642 -479 2161 117 3 7 chr18 42860638 42860946 -43816602 + AluSq SINE Alu 2 308 -5 198 0 0 0 chr18 42860946 42860968 -43816580 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 21 0 0 0 chr18 42861426 42861447 -43816101 + AT_rich Low_complexity Low_complexity 1 21 0 1987 121 11 0 chr18 42861552 42861834 -43815714 - AluSp SINE Alu -2 311 27 1282 178 21 14 chr18 42862162 42862448 -43815100 + MER33 DNA MER1_type 1 288 -36 901 207 0 0 chr18 42862449 42862613 -43814935 + FRAM SINE Alu 1 164 -2 5336 139 28 31 chr18 42863306 42864026 -43813522 - MER49 LTR ERV1 -9 914 195 2405 65 0 3 chr18 42864026 42864334 -43813214 - AluY SINE Alu -4 307 1 5336 139 28 31 chr18 42864334 42864529 -43813019 - MER49 LTR ERV1 -728 195 1 2865 167 39 50 chr18 42865085 42865647 -43811901 - MER21A LTR ERV1 0 931 376 1536 162 4 12 chr18 42865652 42865905 -43811643 - MER21A LTR ERV1 -667 264 14 6974 231 49 17 chr18 42865905 42865985 -43811563 + L1MC1 LINE L1 2965 3041 -3292 2305 102 7 0 chr18 42865985 42866289 -43811259 + AluSx SINE Alu 1 306 -6 6974 231 49 17 chr18 42866289 42867332 -43810216 + L1MC1 LINE L1 3041 4050 -2283 1244 50 6 17 chr18 42867332 42867512 -43810036 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 252 0 0 0 chr18 42867512 42867540 -43810008 + (GGAA)n Simple_repeat Simple_repeat 1 28 0 6974 231 49 17 chr18 42867540 42869162 -43808386 + L1MC1 LINE L1 4050 5619 -714 2283 131 8 16 chr18 42869162 42869529 -43808019 - THE1B LTR MaLR 0 364 1 6974 231 49 17 chr18 42869529 42869696 -43807852 + L1MC1 LINE L1 5619 5779 -554 1357 232 3 19 chr18 42869696 42870006 -43807542 + AluJo SINE Alu 1 305 -7 6974 231 49 17 chr18 42870006 42870350 -43807198 + L1MC1 LINE L1 5779 6333 0 481 303 37 14 chr18 42870348 42870566 -43806982 + L1ME1 LINE L1 34 256 -6140 * 2554 260 53 46 chr18 42870723 42870989 -43806559 + L1ME1 LINE L1 1361 1624 -4591 2206 90 0 0 chr18 42870989 42871266 -43806282 + AluSc SINE Alu 8 284 -25 2554 260 53 46 chr18 42871266 42871844 -43805704 + L1ME1 LINE L1 1624 2196 -4019 1464 227 3 3 chr18 42871844 42872144 -43805404 + AluJo SINE Alu 3 302 0 2554 260 53 46 chr18 42872144 42872956 -43804592 + L1ME1 LINE L1 2196 2991 -3224 984 178 65 18 chr18 42872976 42873249 -43804299 + AluJb SINE Alu 28 312 0 333 64 0 12 chr18 42873494 42873552 -43803996 + AluY SINE Alu 1 40 -262 602 70 0 0 chr18 42873593 42873679 -43803869 - AluSg/x SINE Alu -7 303 218 1537 155 21 24 chr18 42873679 42873969 -43803579 + AluY SINE Alu 15 303 -8 2358 255 58 32 chr18 42873993 42875158 -43802390 + L1ME1 LINE L1 4908 6099 -136 1795 173 7 0 chr18 42875158 42875464 -43802084 + AluSq SINE Alu 4 311 -2 2358 255 58 32 chr18 42875464 42875598 -43801950 + L1ME1 LINE L1 6099 6228 -7 189 258 35 21 chr18 42876005 42876087 -43801461 + MIR SINE MIR 111 146 -62 331 270 15 36 chr18 42876902 42877039 -43800509 - L1MC4 LINE L1 -1 8041 7908 351 244 0 12 chr18 42877254 42877336 -43800212 + MER94 DNA DNA 1 81 -53 261 329 25 44 chr18 42878648 42878806 -43798742 - MIR SINE MIR -46 216 62 215 246 273 18 chr18 42878869 42878979 -43798569 - MIR SINE MIR -123 139 2 283 262 87 47 chr18 42880390 42880539 -43797009 - MIR SINE MIR -96 166 12 206 321 104 22 chr18 42880694 42880828 -43796720 - L2 LINE L2 0 3313 3169 895 185 6 0 chr18 42881299 42881456 -43796092 + MER2 DNA MER2_type 1 158 -187 2052 171 85 0 chr18 42881461 42881836 -43795712 + MSTA LTR MaLR 20 426 -2 394 234 120 34 chr18 42881838 42882013 -43795535 + MER2 DNA MER2_type 156 345 0 537 184 48 0 chr18 42883358 42883461 -43794087 + MER58B DNA MER1_type 205 312 -29 979 251 77 57 chr18 42883802 42884053 -43793495 + L1MD1 LINE L1 5768 6033 -209 312 70 0 0 chr18 42884053 42884096 -43793452 + (CA)n Simple_repeat Simple_repeat 1 43 0 979 251 77 57 chr18 42884096 42884283 -43793265 + L1MD1 LINE L1 6033 6215 -27 8383 218 20 8 chr18 42884391 42886342 -43791206 - L1P LINE L1 -1548 4598 2624 31 26 0 0 chr18 42887290 42887328 -43790220 + AT_rich Low_complexity Low_complexity 1 38 0 412 249 27 45 chr18 42887759 42887980 -43789568 + LTR37B LTR ERV1 243 459 -9 1274 174 93 176 chr18 42888191 42888224 -43789324 + LTR8A LTR ERV1 1 35 -692 1852 174 3 3 chr18 42888224 42888523 -43789025 + AluSx SINE Alu 1 299 -13 1274 174 93 176 chr18 42888523 42889115 -43788433 + LTR8A LTR ERV1 35 552 -175 2209 122 0 0 chr18 42889115 42889411 -43788137 + AluSx SINE Alu 4 299 -13 1274 174 93 176 chr18 42889411 42889558 -43787990 + LTR8A LTR ERV1 552 710 -17 1139 272 68 40 chr18 42889587 42890057 -43787491 - MLT1D LTR MaLR -22 483 1 22 0 0 0 chr18 42890062 42890084 -43787464 + AT_rich Low_complexity Low_complexity 1 22 0 297 205 26 86 chr18 42890469 42890586 -43786962 + LTR37A LTR ERV1 40 149 -277 1225 202 193 17 chr18 42890659 42891016 -43786532 - MER31B LTR ERV1 -46 420 1 2400 184 93 55 chr18 42891132 42891612 -43785936 - LTR48 LTR ERV1 -2 757 297 216 0 0 0 chr18 42891612 42891636 -43785912 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1909 143 0 7 chr18 42891644 42891930 -43785618 - AluSc SINE Alu -25 284 1 2400 184 93 55 chr18 42891930 42892168 -43785380 - LTR48 LTR ERV1 -468 291 18 248 185 99 12 chr18 42892342 42892423 -43785125 + LTR37B LTR ERV1 311 441 -27 1188 208 143 57 chr18 42892423 42892953 -43784595 + MER34C LTR ERV1 8 583 -2 2819 187 72 5 chr18 42893195 42893767 -43783781 - LTR26E LTR ERV1 0 622 13 2449 87 35 8 chr18 42894079 42894553 -43782995 - MER41A LTR ERV1 0 554 1 450 0 0 0 chr18 42894612 42894662 -43782886 + (TG)n Simple_repeat Simple_repeat 2 51 0 235 315 41 0 chr18 42895645 42895718 -43781830 + MIR3 SINE MIR 117 192 -16 213 211 0 0 chr18 42896004 42896061 -43781487 + T-rich Low_complexity Low_complexity 1 57 0 863 216 6 0 chr18 42896493 42896664 -43780884 - FRAM SINE Alu -6 170 1 796 237 5 32 chr18 42896690 42896880 -43780668 + AluJb SINE Alu 125 309 -3 281 203 34 0 chr18 42896892 42896951 -43780597 - MIR SINE MIR -5 257 197 1231 227 81 77 chr18 42896953 42897524 -43780024 + MER34B LTR ERV1 10 559 -6 1598 213 26 3 chr18 42897561 42897913 -43779635 - MER46B DNA MER2_type -1 235 1 442 243 28 0 chr18 42897916 42898023 -43779525 - MIR SINE MIR -111 151 42 1011 199 54 143 chr18 42898023 42898779 -43778769 + LTR8A LTR ERV1 1 727 0 25 51 0 0 chr18 42899092 42899131 -43778417 + AT_rich Low_complexity Low_complexity 1 39 0 1224 191 50 56 chr18 42899305 42899608 -43777940 + AluJo SINE Alu 2 302 0 846 187 11 33 chr18 42899813 42899995 -43777553 + LTR28 LTR ERV1 1 178 -842 231 158 0 0 chr18 42899972 42900010 -43777538 + MER61B LTR ERV1 102 139 -286 * 1197 189 84 37 chr18 42900059 42900381 -43777167 + LTR27 LTR ERV1 298 634 -2 1585 192 7 3 chr18 42900386 42900672 -43776876 + AluJb SINE Alu 26 312 0 1824 179 51 5 chr18 42900987 42901460 -43776088 + MER34C LTR ERV1 37 565 0 1450 137 4 56 chr18 42903073 42903322 -43774226 - MER4A LTR ERV1 0 664 429 1222 135 126 17 chr18 42903309 42903539 -43774009 - MER4B LTR ERV1 -355 255 1 * 1534 184 268 34 chr18 42903572 42904076 -43773472 + LTR29 LTR ERV1 1 622 0 855 287 70 14 chr18 42905638 42905924 -43771624 - L3 LINE CR1 -75 1502 1201 288 256 37 12 chr18 42906139 42906221 -43771327 - MIR SINE MIR -119 143 60 257 146 0 0 chr18 42906254 42906295 -43771253 - Alu SINE Alu -10 292 252 356 401 47 9 chr18 42906301 42906513 -43771035 + L2 LINE L2 2874 3093 -179 2210 198 65 99 chr18 42907991 42908709 -43768839 - LTR8A LTR ERV1 0 727 34 39 38 0 0 chr18 42909838 42909891 -43767657 + AT_rich Low_complexity Low_complexity 1 53 0 1993 164 25 25 chr18 42910174 42910289 -43767259 + MER57A LTR ERV1 1 115 -288 1991 133 44 39 chr18 42910289 42910651 -43766897 + THE1B LTR MaLR 1 364 0 10611 117 11 24 chr18 42910651 42911044 -43766504 + THE1B-int LTR MaLR 1 398 -1182 2413 84 0 6 chr18 42911044 42911355 -43766193 - AluY SINE Alu -2 309 1 10611 117 11 24 chr18 42911355 42912562 -43764986 + THE1B-int LTR MaLR 398 1580 0 1920 168 48 28 chr18 42912562 42912919 -43764629 + THE1B LTR MaLR 1 364 0 1993 164 25 25 chr18 42912919 42913166 -43764382 + MER57A LTR ERV1 112 365 -38 299 336 17 9 chr18 42913750 42913866 -43763682 + MIR3 SINE MIR 87 203 -5 203 323 36 51 chr18 42913942 42914074 -43763474 - MIR SINE MIR -66 142 35 513 322 7 0 chr18 42914487 42914636 -43762912 - L2 LINE L2 0 3313 3164 21 0 0 0 chr18 42914655 42914676 -43762872 + AT_rich Low_complexity Low_complexity 1 21 0 348 301 11 0 chr18 42914825 42914918 -43762630 - L2 LINE L2 -1362 1952 1859 56 79 0 0 chr18 42914949 42915075 -43762473 + AT_rich Low_complexity Low_complexity 1 126 0 251 349 156 30 chr18 42916197 42916659 -43760889 + L3 LINE CR1 932 1451 -126 353 262 48 55 chr18 42917748 42917893 -43759655 + MER5A DNA MER1_type 43 186 -3 901 214 66 52 chr18 42918383 42918654 -43758894 + MER93b LTR ERV1 99 373 0 1992 129 36 3 chr18 42918785 42919087 -43758461 + AluSx SINE Alu 1 312 0 21 57 0 0 chr18 42920162 42920197 -43757351 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr18 42920376 42920404 -43757144 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr18 42920515 42920537 -43757011 + AT_rich Low_complexity Low_complexity 1 22 0 330 78 0 0 chr18 42921076 42921127 -43756421 + MADE1 DNA Mariner 30 80 0 301 202 100 11 chr18 42921772 42921885 -43755663 - L1MC/D LINE L1 -404 5758 5622 274 233 41 0 chr18 42923567 42923640 -43753908 + CT-rich Low_complexity Low_complexity 4 79 0 187 319 0 0 chr18 42923640 42923687 -43753861 - L2 LINE L2 -5 3308 3262 208 197 0 79 chr18 42923965 42924041 -43753507 + T-rich Low_complexity Low_complexity 2 71 0 312 127 0 0 chr18 42924273 42924328 -43753220 + (CA)n Simple_repeat Simple_repeat 2 56 0 289 341 125 37 chr18 42925272 42925679 -43751869 - L2 LINE L2 0 3313 2871 2714 7 0 0 chr18 42925972 42926263 -43751285 + AluYb8 SINE Alu 19 309 -9 303 268 27 44 chr18 42926547 42926730 -43750818 + (TG)n Simple_repeat Simple_repeat 1 180 0 21 57 0 0 chr18 42929360 42929395 -43748153 + AT_rich Low_complexity Low_complexity 1 35 0 211 271 188 10 chr18 42929552 42929648 -43747900 - MIR SINE MIR -66 142 30 325 279 6 70 chr18 42929741 42929899 -43747649 + MER103 DNA DNA 12 159 -7 683 216 0 0 chr18 42930046 42930171 -43747377 - FLAM_C SINE Alu -13 130 6 315 0 0 0 chr18 42931242 42931277 -43746271 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 420 20 0 0 chr18 42931276 42931325 -43746223 + (TA)n Simple_repeat Simple_repeat 2 50 0 240 86 0 0 chr18 42931641 42931676 -43745872 + (TA)n Simple_repeat Simple_repeat 1 35 0 24 32 0 0 chr18 42931840 42931871 -43745677 + AT_rich Low_complexity Low_complexity 1 31 0 424 108 78 6 chr18 42931969 42932136 -43745412 + (TA)n Simple_repeat Simple_repeat 1 179 0 34 24 0 0 chr18 42932141 42932182 -43745366 + AT_rich Low_complexity Low_complexity 1 41 0 214 115 39 0 chr18 42932286 42932338 -43745210 + (TA)n Simple_repeat Simple_repeat 2 55 0 320 102 90 12 chr18 42932548 42932714 -43744834 + (TA)n Simple_repeat Simple_repeat 2 180 0 30 0 0 0 chr18 42932717 42932747 -43744801 + AT_rich Low_complexity Low_complexity 1 30 0 653 50 69 13 chr18 42932752 42932911 -43744637 + (TA)n Simple_repeat Simple_repeat 2 169 0 184 350 0 0 chr18 42933184 42933244 -43744304 - MIR3 SINE MIR -1 207 148 332 328 86 6 chr18 42933247 42933421 -43744127 + MIR SINE MIR 6 193 -69 221 344 31 0 chr18 42933690 42933786 -43743762 + L2 LINE L2 3214 3312 -1 1335 204 15 8 chr18 42934514 42934802 -43742746 - AluJo SINE Alu 0 310 21 201 279 15 0 chr18 42934914 42934982 -43742566 + (TA)n Simple_repeat Simple_repeat 2 70 0 245 211 55 78 chr18 42934982 42935110 -43742438 + MER106B DNA MER1_type 935 1059 0 252 168 9 47 chr18 42935679 42935786 -43741762 + (TA)n Simple_repeat Simple_repeat 2 104 0 1727 181 3 10 chr18 42935865 42936168 -43741380 + AluJb SINE Alu 1 301 -11 2317 176 31 0 chr18 42937171 42937585 -43739963 + MSTA LTR MaLR 2 428 0 23 68 0 0 chr18 42939185 42939229 -43738319 + AT_rich Low_complexity Low_complexity 1 44 0 1727 160 15 91 chr18 42940588 42940994 -43736554 - THE1C LTR MaLR 0 375 1 2115 188 29 12 chr18 42941911 42942327 -43735221 + MSTB LTR MaLR 1 423 -3 183 129 0 0 chr18 42942362 42942393 -43735155 + (A)n Simple_repeat Simple_repeat 1 31 0 27 0 0 0 chr18 42942875 42942902 -43734646 + AT_rich Low_complexity Low_complexity 1 27 0 5156 103 5 0 chr18 42945909 42946647 -43730901 - L1PA11 LINE L1 -8 6166 5425 374 278 34 76 chr18 42946848 42947035 -43730513 - LTR33 LTR ERVL -338 183 3 1073 274 29 26 chr18 42947340 42947646 -43729902 + MLT1I LTR MaLR 103 409 0 541 281 81 19 chr18 42947735 42947945 -43729603 + ERVL LTR ERVL 5059 5281 -483 383 359 94 24 chr18 42948283 42948709 -43728839 + LTR33 LTR ERVL 1 456 -65 1331 221 19 4 chr18 42950284 42950551 -43726997 + MLT1A1 LTR MaLR 1 271 -94 193 206 52 0 chr18 42951869 42951966 -43725582 + (TA)n Simple_repeat Simple_repeat 2 103 0 180 344 21 10 chr18 42952043 42952139 -43725409 - MIR3 SINE MIR -1 207 111 204 43 65 22 chr18 42953129 42953175 -43724373 + (TTTG)n Simple_repeat Simple_repeat 3 50 0 236 275 0 14 chr18 42955082 42955151 -43722397 + T-rich Low_complexity Low_complexity 3 70 0 239 266 51 13 chr18 42955801 42955880 -43721668 + MIR SINE MIR 108 189 -73 228 229 0 0 chr18 42955981 42956064 -43721484 + A-rich Low_complexity Low_complexity 1 83 0 1130 186 34 52 chr18 42957068 42957337 -43720211 - AluJo SINE Alu 0 312 49 1209 180 35 35 chr18 42958570 42958826 -43718722 + AluJo SINE Alu 32 287 -25 1715 161 0 37 chr18 42958892 42959214 -43718334 - AluJb SINE Alu -2 310 1 1075 319 121 53 chr18 42959237 42959738 -43717810 - L2 LINE L2 -2 3270 2804 782 173 0 0 chr18 42959738 42959871 -43717677 + FLAM_C SINE Alu 1 133 0 1075 319 121 53 chr18 42959871 42960046 -43717502 - L2 LINE L2 -468 2804 2642 237 33 0 0 chr18 42960046 42960076 -43717472 + (CA)n Simple_repeat Simple_repeat 2 31 0 1075 319 121 53 chr18 42960076 42960582 -43716966 - L2 LINE L2 -630 2642 1990 23 33 0 0 chr18 42961001 42961031 -43716517 + AT_rich Low_complexity Low_complexity 1 30 0 265 304 25 56 chr18 42962980 42963141 -43714407 + MER117 DNA MER1_type 11 166 -31 616 238 6 52 chr18 42963893 42964065 -43713483 + MIR SINE MIR 53 216 -46 202 355 11 11 chr18 42964850 42964943 -43712605 - MIR3 SINE MIR -6 202 110 242 279 38 0 chr18 42965592 42965671 -43711877 - MLT1F LTR MaLR -460 82 1 202 250 19 0 chr18 42967042 42967094 -43710454 - MIR SINE MIR -72 136 84 181 341 33 11 chr18 42967188 42967279 -43710269 + MIR3 SINE MIR 103 195 -13 209 278 19 0 chr18 42967466 42967520 -43710028 - L2 LINE L2 0 3313 3259 2023 120 62 0 chr18 42967520 42967812 -43709736 - AluSx SINE Alu -2 310 1 451 247 162 13 chr18 42967856 42968010 -43709538 + MER5A DNA MER1_type 13 189 0 28 0 0 0 chr18 42970769 42970797 -43706751 + AT_rich Low_complexity Low_complexity 1 28 0 511 262 29 82 chr18 42971795 42972001 -43705547 + MIR SINE MIR 62 256 -6 183 188 0 0 chr18 42974749 42974781 -43702767 - L2 LINE L2 -777 2537 2506 283 344 16 8 chr18 42975037 42975159 -43702389 + GA-rich Low_complexity Low_complexity 3 125 0 186 274 0 0 chr18 42976047 42976098 -43701450 + L2 LINE L2 2724 2774 -540 414 0 0 0 chr18 42976339 42976353 -43701195 + (TA)n Simple_repeat Simple_repeat 1 60 0 414 0 0 0 chr18 42976353 42976399 -43701149 + (TA)n Simple_repeat Simple_repeat 2 47 0 2343 33 3 93 chr18 42976528 42976862 -43700686 - AluY SINE Alu -7 304 1 21 36 0 0 chr18 42977206 42977234 -43700314 + AT_rich Low_complexity Low_complexity 1 28 0 275 322 50 16 chr18 42978272 42978393 -43699155 + L2 LINE L2 3180 3304 -9 1596 190 81 82 chr18 42979283 42979327 -43698221 - MLT2B1 LTR ERVL 0 520 477 198 71 0 0 chr18 42979327 42979355 -43698193 + (CA)n Simple_repeat Simple_repeat 1 28 0 1596 190 81 82 chr18 42979355 42979831 -43697717 - MLT2B1 LTR ERVL -43 477 1 239 211 0 0 chr18 42979877 42979929 -43697619 + L1MC4 LINE L1 6652 6703 -1339 2659 203 35 17 chr18 42979936 42980527 -43697021 + MER7C DNA MER2_type 1 602 0 518 325 10 25 chr18 42980623 42980826 -43696722 - MIR SINE MIR -52 210 11 616 302 79 55 chr18 42981544 42982171 -43695377 + L1ME2 LINE L1 35 641 -5574 2004 155 9 12 chr18 42982171 42982506 -43695042 + MER1B DNA MER1_type 1 334 -3 616 302 79 55 chr18 42982506 42982898 -43694650 + L1ME2 LINE L1 641 1022 -5193 229 211 0 0 chr18 42982898 42982950 -43694598 + (TA)n Simple_repeat Simple_repeat 1 52 0 4235 252 81 29 chr18 42982992 42983743 -43693805 + L1ME2 LINE L1 3627 4338 -2065 1742 105 94 40 chr18 42983743 42984019 -43693529 + AluSx SINE Alu 1 291 -21 4235 252 81 29 chr18 42984019 42985756 -43691792 + L1ME2 LINE L1 4338 6403 0 344 203 0 0 chr18 42985757 42985816 -43691732 + L2 LINE L2 3249 3307 -6 216 111 0 0 chr18 42986519 42986555 -43690993 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 458 250 81 31 chr18 42986963 42987123 -43690425 - MIR SINE MIR -77 185 18 202 284 148 43 chr18 42988207 42988354 -43689194 - MIR SINE MIR -58 204 44 2556 65 0 0 chr18 42988735 42989045 -43688503 - AluY SINE Alu -1 310 1 185 245 9 94 chr18 42993279 42993385 -43684163 + L2 LINE L2 256 352 -2962 1041 110 0 0 chr18 42993424 42993570 -43683978 + AluSp/q SINE Alu 168 313 0 6037 105 35 2 chr18 42994292 42995275 -43682273 - L1PA13 LINE L1 0 6163 5152 4268 171 30 7 chr18 42995277 42995341 -43682207 + L1P LINE L1 4335 4396 -1750 225 0 0 0 chr18 42995341 42995366 -43682182 + (CA)n Simple_repeat Simple_repeat 2 26 0 4268 171 30 7 chr18 42995366 42996131 -43681417 + L1P LINE L1 4396 5183 -963 251 274 72 105 chr18 42996942 42997095 -43680453 - MIR3 SINE MIR -67 141 3 2276 66 0 75 chr18 42997201 42997536 -43680012 - AluY SINE Alu -1 310 1 333 68 0 0 chr18 43048315 43048359 -43629189 + (GGGAA)n Simple_repeat Simple_repeat 5 48 0 21 0 0 0 chr18 43048402 43048423 -43629125 + AT_rich Low_complexity Low_complexity 1 21 0 2592 188 17 4 chr18 43049164 43049633 -43627915 - MER66B LTR ERV1 -2 484 10 396 229 23 19 chr18 43050043 43050168 -43627380 + MIR SINE MIR 43 169 -63 321 325 30 42 chr18 43050177 43050343 -43627205 - MIR3 SINE MIR -6 202 39 31 0 0 0 chr18 43050540 43050571 -43626977 + AT_rich Low_complexity Low_complexity 1 31 0 207 250 0 19 chr18 43052063 43052115 -43625433 + GA-rich Low_complexity Low_complexity 2 52 0 351 0 0 0 chr18 43052323 43052362 -43625186 + (CA)n Simple_repeat Simple_repeat 2 40 0 1273 177 24 54 chr18 43053193 43053527 -43624021 + MER33 DNA MER1_type 1 324 0 1306 136 59 140 chr18 43053698 43053739 -43623809 - THE1C LTR MaLR -2 373 330 2061 127 3 10 chr18 43053739 43054038 -43623510 + AluSx SINE Alu 2 298 -14 1306 136 59 140 chr18 43054038 43054402 -43623146 - THE1C LTR MaLR -45 330 1 473 280 43 38 chr18 43054484 43054830 -43622718 - L1M4 LINE L1 -831 5315 4968 34 55 0 0 chr18 43055396 43055451 -43622097 + AT_rich Low_complexity Low_complexity 1 55 0 272 232 98 0 chr18 43055526 43055608 -43621940 - L1ME LINE L1 -253 5868 5779 1204 178 11 71 chr18 43056086 43056367 -43621181 + AluJo SINE Alu 5 268 -44 385 194 0 14 chr18 43056542 43056614 -43620934 - MER92B LTR ERV1 -557 79 9 2348 122 8 19 chr18 43056844 43057212 -43620336 + THE1B LTR MaLR 1 364 0 270 295 115 65 chr18 43057426 43057643 -43619905 - L2 LINE L2 -191 3081 2854 6039 154 39 37 chr18 43057708 43058254 -43619294 + Tigger3b DNA MER2_type 1 544 -2484 1602 191 19 32 chr18 43058254 43058563 -43618985 - AluJo SINE Alu -7 305 1 6039 154 39 37 chr18 43058563 43059244 -43618304 + Tigger3b DNA MER2_type 544 1231 0 210 333 170 15 chr18 43059254 43059389 -43618159 - L2 LINE L2 -575 2739 2584 602 292 120 51 chr18 43059398 43060008 -43617540 - L1M4 LINE L1 -1357 4789 4138 5802 192 13 8 chr18 43060046 43061101 -43616447 - L1PA15 LINE L1 -16 6149 5138 3339 99 2 7 chr18 43061101 43061556 -43615992 - MLT2A2 LTR ERVL 0 453 1 5802 192 13 8 chr18 43061556 43062551 -43614997 - L1PA15 LINE L1 -1027 5138 4149 25 31 0 0 chr18 43062980 43063012 -43614536 + AT_rich Low_complexity Low_complexity 1 32 0 221 290 0 65 chr18 43063045 43063231 -43614317 + T-rich Low_complexity Low_complexity 1 174 0 586 120 8 8 chr18 43063671 43063788 -43613760 + (TTCC)n Simple_repeat Simple_repeat 2 118 0 262 383 49 6 chr18 43064562 43064867 -43612681 - L2 LINE L2 -132 3181 2859 312 338 84 29 chr18 43064869 43065180 -43612368 + L1MC/D LINE L1 5409 5736 -2072 31 26 0 0 chr18 43065384 43065422 -43612126 + AT_rich Low_complexity Low_complexity 1 38 0 1892 151 7 0 chr18 43066588 43066907 -43610641 - AluSx SINE Alu 0 312 1 3262 191 47 10 chr18 43067884 43068594 -43608954 + L1MB4 LINE L1 5443 6178 -2 21 0 0 0 chr18 43069827 43069848 -43607700 + AT_rich Low_complexity Low_complexity 1 21 0 1367 208 27 44 chr18 43070612 43070910 -43606638 + AluJb SINE Alu 1 293 -9 2164 160 3 32 chr18 43070925 43071300 -43606248 - THE1B LTR MaLR 0 364 1 683 333 18 5 chr18 43071512 43071734 -43605814 - MIR SINE MIR -1 261 37 1922 199 72 0 chr18 43072687 43073090 -43604458 + MSTB1 LTR MaLR 1 432 0 285 231 35 77 chr18 43073157 43073300 -43604248 - MLT2E LTR ERVL 0 628 492 190 227 0 0 chr18 43073336 43073380 -43604168 + L2 LINE L2 3269 3312 -1 491 239 22 23 chr18 43073531 43073783 -43603765 + L1MB3 LINE L1 3014 3263 -2883 2079 125 0 0 chr18 43073920 43074230 -43603318 + AluY SINE Alu 5 314 0 6212 230 71 23 chr18 43074230 43075115 -43602433 + L1MB3 LINE L1 3250 4091 -2092 333 0 0 0 chr18 43075115 43075152 -43602396 + (CA)n Simple_repeat Simple_repeat 1 37 0 6212 230 71 23 chr18 43075152 43076671 -43600877 + L1MB3 LINE L1 4091 5779 -404 742 207 31 0 chr18 43076672 43076865 -43600683 + L1MB3 LINE L1 5984 6182 -1 387 315 51 11 chr18 43077515 43077693 -43599855 + MER20 DNA MER1_type 35 219 0 272 331 75 8 chr18 43078823 43078956 -43598592 + MIR SINE MIR 102 243 -19 3081 226 41 16 chr18 43081696 43082650 -43594898 + L1ME1 LINE L1 5101 6074 -92 327 308 156 14 chr18 43083084 43083295 -43594253 - MIR SINE MIR -10 252 12 239 325 60 8 chr18 43083603 43083720 -43593828 - L2 LINE L2 -14 3299 3177 279 374 82 35 chr18 43083928 43084294 -43593254 - L2 LINE L2 -345 2969 2587 1610 116 4 9 chr18 43084447 43084679 -43592869 + AluSq SINE Alu 83 313 0 1089 233 109 45 chr18 43085992 43086461 -43591087 - MER110A LTR ERV1 -11 480 1 472 248 0 32 chr18 43086637 43086733 -43590815 + MIR SINE MIR 49 142 -120 1374 261 20 3 chr18 43086733 43087090 -43590458 - MLT1A1 LTR MaLR 0 365 3 472 248 0 32 chr18 43087090 43087118 -43590430 + MIR SINE MIR 142 169 -93 318 281 10 21 chr18 43087380 43087476 -43590072 + MIR3 SINE MIR 6 100 -108 180 0 0 0 chr18 43088319 43088339 -43589209 + (TTTTTG)n Simple_repeat Simple_repeat 2 21 0 188 152 0 30 chr18 43088750 43088783 -43588765 + L3 LINE CR1 1077 1108 -469 367 316 69 17 chr18 43089737 43089911 -43587637 + MIR3 SINE MIR 21 203 -5 2392 74 0 13 chr18 43090246 43090556 -43586992 - AluY SINE Alu -5 306 1 185 234 227 8 chr18 43090735 43090863 -43586685 - MIR SINE MIR -26 236 81 195 297 117 28 chr18 43091204 43091349 -43586199 + L2 LINE L2 2038 2195 -1119 296 368 62 29 chr18 43091762 43091971 -43585577 - MIR SINE MIR -37 225 10 608 271 35 6 chr18 43093034 43093204 -43584344 + MIR SINE MIR 86 260 -2 29 28 0 0 chr18 43093333 43093369 -43584179 + AT_rich Low_complexity Low_complexity 1 36 0 423 362 106 32 chr18 43094254 43094865 -43582683 - L2 LINE L2 -209 3063 2405 1430 235 34 75 chr18 43095294 43095830 -43581718 + L1ME1 LINE L1 5649 6162 -4 22 56 0 0 chr18 43096169 43096205 -43581343 + AT_rich Low_complexity Low_complexity 1 36 0 414 318 117 13 chr18 43096395 43097195 -43580353 + L1 LINE L1 3663 4588 -1558 377 316 83 37 chr18 43097208 43097534 -43580014 + L1 LINE L1 4644 4984 -1162 412 243 21 21 chr18 43097573 43097713 -43579835 + L1M4 LINE L1 2875 3014 -3132 21 36 0 0 chr18 43097793 43097821 -43579727 + AT_rich Low_complexity Low_complexity 1 28 0 2390 75 0 13 chr18 43098040 43098347 -43579201 + AluY SINE Alu 1 303 -8 459 254 107 100 chr18 43098453 43098921 -43578627 + L1M4 LINE L1 3488 3958 -2188 1657 242 31 39 chr18 43098963 43099472 -43578076 - MLT1D LTR MaLR 0 505 1 367 254 115 80 chr18 43099659 43099946 -43577602 - MLT1J LTR MaLR -213 298 2 382 304 70 6 chr18 43099949 43100107 -43577441 + L1M4 LINE L1 4021 4188 -1958 2302 117 0 0 chr18 43100255 43100564 -43576984 + AluSq SINE Alu 5 313 0 593 147 9 0 chr18 43100573 43100682 -43576866 + GA-rich Low_complexity Low_complexity 3 112 0 180 292 179 58 chr18 43100731 43101043 -43576505 - L2 LINE L2 -1135 2179 1830 1785 185 37 58 chr18 43101047 43101511 -43576037 + L1MB1 LINE L1 5714 6167 -1 497 345 153 39 chr18 43101524 43102268 -43575280 - L2 LINE L2 -1487 1827 999 582 210 93 37 chr18 43103449 43103611 -43573937 - MER5B DNA MER1_type -5 173 3 287 248 30 30 chr18 43103862 43103963 -43573585 + MIR SINE MIR 111 211 -51 591 250 8 0 chr18 43106777 43106905 -43570643 + MER94 DNA DNA 6 134 0 541 270 122 26 chr18 43107025 43107255 -43570293 - MIR SINE MIR 0 262 11 2156 103 0 0 chr18 43107276 43107600 -43569948 - AluSq SINE Alu 0 324 1 341 260 186 34 chr18 43109143 43109347 -43568201 - MIR SINE MIR 0 262 28 4014 81 9 5 chr18 43109578 43110132 -43567416 - L1PA8 LINE L1 -2 6170 5615 21 0 0 0 chr18 43110338 43110359 -43567189 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr18 43111300 43111334 -43566214 + AT_rich Low_complexity Low_complexity 1 34 0 21 82 0 0 chr18 43111634 43111683 -43565865 + AT_rich Low_complexity Low_complexity 1 49 0 2322 306 121 27 chr18 43112246 43113509 -43564039 + L2 LINE L2 762 1904 -1410 279 54 0 0 chr18 43113509 43113546 -43564002 + (TCTTG)n Simple_repeat Simple_repeat 4 40 0 2322 306 121 27 chr18 43113546 43113612 -43563936 + L2 LINE L2 1904 1962 -1352 2368 81 3 0 chr18 43113612 43113907 -43563641 + AluY SINE Alu 1 296 -15 2322 306 121 27 chr18 43113907 43114154 -43563394 + L2 LINE L2 1962 2488 -826 313 307 73 29 chr18 43114181 43114318 -43563230 + L2 LINE L2 3171 3313 0 205 379 44 60 chr18 43115888 43116186 -43561362 + L2 LINE L2 2667 2959 -355 223 298 101 32 chr18 43116467 43116630 -43560918 - MIR SINE MIR -55 207 29 195 42 0 0 chr18 43116731 43116755 -43560793 + (TC)n Simple_repeat Simple_repeat 1 24 0 364 218 115 0 chr18 43117881 43117968 -43559580 - L2 LINE L2 0 3313 3217 414 102 23 34 chr18 43118079 43118167 -43559381 + (TTTTC)n Simple_repeat Simple_repeat 4 90 0 2029 110 9 58 chr18 43118172 43118498 -43559050 - AluSx SINE Alu -2 310 1 2796 183 43 67 chr18 43119279 43119293 -43558255 - L1MC2 LINE L1 -1 6343 6330 845 218 6 0 chr18 43119293 43119463 -43558085 + FAM SINE Alu 3 173 -2 2796 183 43 67 chr18 43119463 43119856 -43557692 - L1MC2 LINE L1 -14 6330 5958 2166 107 40 3 chr18 43119856 43120155 -43557393 - AluSx SINE Alu -2 310 1 2796 183 43 67 chr18 43120155 43120463 -43557085 - L1MC2 LINE L1 -386 5958 5644 372 356 27 32 chr18 43121211 43121430 -43556118 - MIR SINE MIR -43 219 2 348 240 21 31 chr18 43122981 43123077 -43554471 + MIR3 SINE MIR 83 177 -31 180 0 0 0 chr18 43123077 43123097 -43554451 + (CA)n Simple_repeat Simple_repeat 2 21 0 313 308 210 14 chr18 43124008 43124151 -43553397 + MER91A DNA MER1_type 1 171 -25 2109 175 70 10 chr18 43125650 43126050 -43551498 - MSTB LTR MaLR -2 424 1 205 289 31 21 chr18 43127465 43127562 -43549986 + (TCTCTG)n Simple_repeat Simple_repeat 4 101 0 321 311 139 14 chr18 43127974 43128183 -43549365 + MIR SINE MIR 27 261 -1 2046 269 47 46 chr18 43128370 43129241 -43548307 - HAL1 LINE L1 -10 2497 1626 614 274 51 11 chr18 43129276 43129451 -43548097 + MER58A DNA MER1_type 43 224 0 421 281 161 26 chr18 43129451 43129643 -43547905 - HAL1 LINE L1 -874 1633 1416 2737 257 57 30 chr18 43129783 43131412 -43546136 + L1ME1 LINE L1 1639 3268 -2947 423 0 0 0 chr18 43131583 43131630 -43545918 + (CA)n Simple_repeat Simple_repeat 2 48 0 298 216 9 54 chr18 43131780 43131891 -43545657 + (TA)n Simple_repeat Simple_repeat 1 106 0 218 105 26 0 chr18 43131909 43131947 -43545601 + (CA)n Simple_repeat Simple_repeat 2 40 0 4382 239 61 38 chr18 43131952 43134263 -43543285 + L1ME1 LINE L1 3857 6220 -15 517 282 15 15 chr18 43135134 43135265 -43542283 - MARNA DNA Mariner -393 193 63 385 273 91 0 chr18 43136103 43136213 -43541335 + MIR SINE MIR 49 168 -94 246 62 0 0 chr18 43136429 43136461 -43541087 + (CA)n Simple_repeat Simple_repeat 1 32 0 470 268 56 0 chr18 43137285 43137427 -43540121 - MER103 DNA DNA -7 159 10 191 175 53 53 chr18 43137448 43137505 -43540043 + L2 LINE L2 3243 3299 -14 224 340 19 57 chr18 43137588 43137694 -43539854 - L2 LINE L2 -46 3226 3125 404 386 9 9 chr18 43137716 43137931 -43539617 + MIR SINE MIR 10 224 -38 25 0 0 0 chr18 43137997 43138022 -43539526 + AT_rich Low_complexity Low_complexity 1 25 0 217 263 18 18 chr18 43138026 43138083 -43539465 + L2 LINE L2 3256 3312 -1 1167 254 99 35 chr18 43138213 43138618 -43538930 + MLT2F LTR ERVL 1 431 -232 465 338 90 16 chr18 43139346 43139725 -43537823 + HsTC2 DNA Tc2 485 891 -1007 225 97 0 0 chr18 43143140 43143171 -43534377 - U2 snRNA snRNA -157 31 1 333 0 0 0 chr18 43143821 43143858 -43533690 + (TG)n Simple_repeat Simple_repeat 2 38 0 1581 145 118 4 chr18 43144342 43144597 -43532951 + AluSx SINE Alu 1 284 -28 348 24 0 0 chr18 43144601 43144642 -43532906 + (TAA)n Simple_repeat Simple_repeat 2 42 0 209 274 81 32 chr18 43146095 43146157 -43531391 - MIR SINE MIR -119 89 25 912 185 0 19 chr18 43146181 43146338 -43531210 + FRAM SINE Alu 1 153 -23 856 205 24 67 chr18 43147219 43147429 -43530119 + MER63A DNA MER1_type 7 207 -3 188 317 61 0 chr18 43148961 43149043 -43528505 - MIR SINE MIR -118 144 58 4570 135 7 8 chr18 43149152 43149895 -43527653 - L1PA16 LINE L1 -9 6157 5416 787 278 116 50 chr18 43150340 43150842 -43526706 + MER115 DNA AcHobo 154 4031 0 673 263 96 15 chr18 43151672 43151870 -43525678 + MIR SINE MIR 49 262 0 195 265 20 0 chr18 43151975 43152024 -43525524 + L2 LINE L2 2301 2350 -964 2250 198 29 2 chr18 43152631 43153086 -43524462 + MLT1C LTR MaLR 1 467 0 1982 98 4 0 chr18 43153390 43153644 -43523904 - AluSp SINE Alu -20 293 39 535 278 44 29 chr18 43153844 43154049 -43523499 + MLT1L LTR MaLR 362 569 -46 916 314 79 8 chr18 43154308 43154674 -43522874 + MLT1I LTR MaLR 3 394 -15 391 341 109 14 chr18 43155590 43155810 -43521738 - MIR SINE MIR -9 253 13 355 377 24 18 chr18 43157615 43157782 -43519766 - MIR3 SINE MIR -28 180 13 3653 60 2 4 chr18 43158509 43158978 -43518570 - L1PA7 LINE L1 -3 6151 5684 215 163 0 20 chr18 43159093 43159142 -43518406 + A-rich Low_complexity Low_complexity 3 50 0 201 175 0 0 chr18 43160533 43160573 -43516975 + (CA)n Simple_repeat Simple_repeat 2 41 0 368 337 9 61 chr18 43162802 43163014 -43514534 + MIR SINE MIR 20 219 -43 668 279 92 94 chr18 43163828 43164466 -43513082 + HAL1 LINE L1 400 1036 -1471 1699 189 7 3 chr18 43164480 43164786 -43512762 + AluJo SINE Alu 3 309 -3 2045 229 73 77 chr18 43164800 43166007 -43511541 - L1MC5 LINE L1 -62 7899 6698 580 244 134 68 chr18 43166491 43166827 -43510721 + HAL1 LINE L1 1301 1658 -849 614 278 95 50 chr18 43167068 43167529 -43510019 + HAL1 LINE L1 1929 2410 -97 1363 186 4 16 chr18 43167602 43167854 -43509694 - AluJo SINE Alu -30 282 34 311 267 233 24 chr18 43169631 43169837 -43507711 - MIR SINE MIR -6 256 8 287 330 55 9 chr18 43171288 43171397 -43506151 - MIR SINE MIR -118 144 31 1038 185 76 17 chr18 43171848 43172150 -43505398 - MER33 DNA MER1_type -4 320 1 25 0 0 0 chr18 43172761 43172786 -43504762 + AT_rich Low_complexity Low_complexity 1 25 0 1799 136 11 14 chr18 43173030 43173347 -43504201 + AluSc SINE Alu 1 316 0 26 88 0 0 chr18 43173802 43173870 -43503678 + AT_rich Low_complexity Low_complexity 1 68 0 199 54 54 0 chr18 43174562 43174599 -43502949 + T-rich Low_complexity Low_complexity 2 40 0 21 0 0 0 chr18 43175665 43175686 -43501862 + AT_rich Low_complexity Low_complexity 1 21 0 331 325 43 0 chr18 43177018 43177135 -43500413 + MIR SINE MIR 59 180 -82 344 234 162 18 chr18 43177299 43177410 -43500138 - MIR3 SINE MIR -3 205 79 212 384 49 27 chr18 43177601 43177825 -43499723 + L2 LINE L2 2679 2907 -407 405 283 13 94 chr18 43177998 43178157 -43499391 + L2 LINE L2 3122 3267 -5 203 161 0 0 chr18 43178159 43178190 -43499358 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 275 105 0 0 chr18 43179394 43179432 -43498116 + MADE1 DNA Mariner 2 39 -41 281 330 76 32 chr18 43179649 43179834 -43497714 + MIR SINE MIR 13 205 -57 509 308 6 33 chr18 43180591 43180773 -43496775 - MIR SINE MIR -65 197 21 229 298 132 25 chr18 43181304 43181482 -43496066 - MIR SINE MIR -19 243 37 285 216 0 14 chr18 43181496 43181570 -43495978 + (TA)n Simple_repeat Simple_repeat 1 73 0 184 283 0 0 chr18 43181902 43181948 -43495600 - L2 LINE L2 -13 3300 3255 330 286 45 18 chr18 43181952 43182064 -43495484 - MIR SINE MIR -61 147 33 634 300 131 44 chr18 43182633 43183205 -43494343 + L2 LINE L2 2690 3308 -5 2253 120 13 47 chr18 43183244 43183626 -43493922 + THE1C LTR MaLR 7 375 0 237 65 0 0 chr18 43186916 43186947 -43490601 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1498 253 63 28 chr18 43188042 43188630 -43488918 - MER21B LTR ERV1 -76 787 127 29 0 0 0 chr18 43188705 43188734 -43488814 + AT_rich Low_complexity Low_complexity 1 29 0 895 295 142 28 chr18 43189102 43189539 -43488009 - LTR33 LTR ERVL -25 496 10 690 197 21 21 chr18 43189758 43189900 -43487648 - AluJo SINE Alu -133 179 38 739 343 91 44 chr18 43190002 43190176 -43487372 + L2 LINE L2 1983 2147 -1167 1845 170 0 7 chr18 43190176 43190476 -43487072 - AluJb SINE Alu -9 303 6 739 343 91 44 chr18 43190476 43191149 -43486399 + L2 LINE L2 2147 2870 -444 191 333 17 17 chr18 43191223 43191283 -43486265 + L2 LINE L2 3011 3070 -243 189 230 189 0 chr18 43191574 43191648 -43485900 + L2 LINE L2 3111 3198 -115 218 300 0 29 chr18 43191924 43191994 -43485554 + L2 LINE L2 3205 3272 0 222 91 0 0 chr18 43192894 43192927 -43484621 + (TG)n Simple_repeat Simple_repeat 1 33 0 213 39 0 0 chr18 43192926 43192952 -43484596 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 310 174 69 160 chr18 43193592 43193736 -43483812 - MER20B DNA MER1_type -3 780 650 403 288 89 53 chr18 43193766 43194496 -43483052 + L1MEd LINE L1 969 1763 -4547 216 194 48 16 chr18 43194498 43194560 -43482988 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 278 224 71 0 chr18 43194761 43194846 -43482702 - L1MC4 LINE L1 -1339 6703 6613 186 189 0 0 chr18 43194860 43194897 -43482651 + (TA)n Simple_repeat Simple_repeat 2 38 0 270 152 152 0 chr18 43194901 43194980 -43482568 - L1MC4 LINE L1 -1337 6705 6615 462 211 0 0 chr18 43194981 43195085 -43482463 + (CATA)n Simple_repeat Simple_repeat 4 107 0 231 289 24 0 chr18 43195086 43195169 -43482379 + L1MC4 LINE L1 6615 6699 -1343 204 97 0 0 chr18 43195362 43195393 -43482155 + (GA)n Simple_repeat Simple_repeat 2 32 0 254 317 73 33 chr18 43195756 43195925 -43481623 - MER5B DNA MER1_type -11 178 2 894 139 0 0 chr18 43196212 43196349 -43481199 - AluSp/q SINE Alu -18 295 159 1229 181 0 37 chr18 43197074 43197317 -43480231 + MER46A DNA MER2_type 1 234 -2 335 248 20 40 chr18 43199261 43199362 -43478186 + L1MC4 LINE L1 6605 6703 -1339 1107 84 0 0 chr18 43199375 43199553 -43477995 + (TA)n Simple_repeat Simple_repeat 1 178 0 261 83 0 0 chr18 43199554 43199590 -43477958 + (CATA)n Simple_repeat Simple_repeat 4 39 0 25 0 0 0 chr18 43200317 43200342 -43477206 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr18 43200527 43200557 -43476991 + AT_rich Low_complexity Low_complexity 1 30 0 564 240 5 109 chr18 43200806 43200998 -43476550 - MER77 LTR ERV1 -319 286 115 21 0 0 0 chr18 43202932 43202953 -43474595 + AT_rich Low_complexity Low_complexity 1 21 0 192 238 0 0 chr18 43203160 43203202 -43474346 + L2 LINE L2 3272 3313 0 699 295 58 0 chr18 43203386 43203593 -43473955 - MIR SINE MIR -21 241 23 240 222 19 0 chr18 43203597 43203651 -43473897 + T-rich Low_complexity Low_complexity 4 58 0 267 141 14 28 chr18 43203671 43203742 -43473806 + CT-rich Low_complexity Low_complexity 3 72 0 1040 97 11 11 chr18 43203753 43203928 -43473620 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1224 175 45 68 chr18 43203928 43203955 -43473593 - L1MB8 LINE L1 -9 6169 6143 1926 170 0 80 chr18 43203955 43204134 -43473414 + MLT1B LTR MaLR 1 193 -197 2223 110 0 7 chr18 43204134 43204443 -43473105 + AluSc SINE Alu 2 308 -1 1926 170 0 80 chr18 43204443 43204687 -43472861 + MLT1B LTR MaLR 193 390 0 1224 175 45 68 chr18 43204687 43204967 -43472581 - L1MB8 LINE L1 -35 6143 5869 2035 148 0 0 chr18 43205212 43205502 -43472046 + AluSx SINE Alu 1 290 -22 181 269 39 39 chr18 43205575 43205653 -43471895 + L3 LINE CR1 605 682 -895 432 305 91 68 chr18 43207345 43207739 -43469809 - MLT1K LTR MaLR -58 530 128 250 200 143 14 chr18 43209199 43209269 -43468279 + MIR SINE MIR 110 188 -74 231 88 0 0 chr18 43209621 43209655 -43467893 + (T)n Simple_repeat Simple_repeat 1 34 0 235 257 93 43 chr18 43211480 43211620 -43465928 - L3b LINE CR1 -190 1393 1247 390 21 0 0 chr18 43213479 43213526 -43464022 + (TG)n Simple_repeat Simple_repeat 2 48 0 2115 126 3 16 chr18 43213914 43214223 -43463325 + AluSx SINE Alu 1 305 -7 634 311 11 45 chr18 43214780 43215044 -43462504 - MIR SINE MIR -5 257 3 22 35 0 0 chr18 43216020 43216049 -43461499 + AT_rich Low_complexity Low_complexity 1 29 0 200 294 0 0 chr18 43216268 43216319 -43461229 + MER5A DNA MER1_type 1 51 -138 1617 167 0 37 chr18 43216323 43216592 -43460956 + AluJo SINE Alu 1 259 -53 185 215 89 63 chr18 43218214 43218293 -43459255 + MIR SINE MIR 76 156 -106 227 343 58 64 chr18 43218425 43218597 -43458951 + L2 LINE L2 3101 3271 -1 912 272 87 17 chr18 43218930 43219400 -43458148 - L1ME3A LINE L1 -2 6168 5666 692 305 90 41 chr18 43219449 43220011 -43457537 + L2 LINE L2 2509 3100 -213 2643 152 24 12 chr18 43220087 43220595 -43456953 - L1MB7 LINE L1 -8 6176 5663 1970 117 46 0 chr18 43220804 43221086 -43456462 + AluSx SINE Alu 1 295 -17 1928 144 0 21 chr18 43222241 43222562 -43454986 + AluSx SINE Alu 1 315 0 195 389 0 56 chr18 43222572 43222680 -43454868 - L2 LINE L2 -49 3223 3122 180 367 95 19 chr18 43222819 43223029 -43454519 - L2 LINE L2 -337 2977 2752 1908 141 3 3 chr18 43223351 43223656 -43453892 - AluSq SINE Alu 0 305 1 675 279 62 9 chr18 43223921 43224147 -43453401 - MIR SINE MIR -10 252 15 197 348 43 14 chr18 43224155 43224224 -43453324 + MIR SINE MIR 20 90 -118 202 324 0 28 chr18 43224390 43224461 -43453087 - L2 LINE L2 -3 3269 3201 189 0 0 0 chr18 43224709 43224730 -43452818 + (TA)n Simple_repeat Simple_repeat 2 22 0 336 48 0 0 chr18 43224791 43224833 -43452715 + (CA)n Simple_repeat Simple_repeat 1 42 0 235 259 12 62 chr18 43224974 43225055 -43452493 - MER5A DNA MER1_type 0 189 113 206 323 0 16 chr18 43225000 43225062 -43452486 + MER5A DNA MER1_type 35 95 -94 * 24 53 0 0 chr18 43225511 43225549 -43451999 + AT_rich Low_complexity Low_complexity 1 38 0 520 273 66 81 chr18 43225593 43225927 -43451621 + MER102b DNA MER1_type 1 329 -12 1651 172 14 25 chr18 43226138 43226423 -43451125 + AluJo SINE Alu 1 282 -30 251 163 20 0 chr18 43227284 43227333 -43450215 + GA-rich Low_complexity Low_complexity 4 53 0 581 60 36 0 chr18 43227343 43227427 -43450121 + (GAAAA)n Simple_repeat Simple_repeat 3 89 0 2571 121 11 3 chr18 43228419 43228791 -43448757 - THE1C LTR MaLR 0 375 1 183 382 107 24 chr18 43228843 43229262 -43448286 + L2 LINE L2 813 1266 -2048 1314 171 28 32 chr18 43229300 43229552 -43447996 + AluJo SINE Alu 39 289 -23 201 241 0 0 chr18 43229553 43229607 -43447941 + GA-rich Low_complexity Low_complexity 1 54 0 1013 319 143 80 chr18 43229644 43230006 -43447542 + L2 LINE L2 1395 1733 -1580 2847 19 0 0 chr18 43230006 43230324 -43447224 + AluYb8 SINE Alu 1 318 0 1013 319 143 80 chr18 43230324 43230462 -43447086 + L2 LINE L2 1733 1861 -1452 1414 191 3 91 chr18 43230462 43230792 -43446756 - AluJo SINE Alu -11 301 1 1013 319 143 80 chr18 43230792 43231863 -43445685 + L2 LINE L2 1861 3074 -239 234 296 250 17 chr18 43231900 43232072 -43445476 - MIR SINE MIR -48 214 3 279 207 17 0 chr18 43232140 43232198 -43445350 - L2 LINE L2 0 3313 3255 1307 231 162 18 chr18 43232413 43232851 -43444697 - MLT1D LTR MaLR 0 505 5 308 327 127 18 chr18 43232994 43233159 -43444389 - MER5A DNA MER1_type -1 188 6 181 298 0 0 chr18 43234540 43234587 -43442961 - L2 LINE L2 0 3313 3267 22 0 0 0 chr18 43234953 43234975 -43442573 + AT_rich Low_complexity Low_complexity 1 22 0 453 122 0 0 chr18 43235065 43235139 -43442409 + (CA)n Simple_repeat Simple_repeat 1 74 0 2251 114 0 0 chr18 43236960 43237258 -43440290 + AluY SINE Alu 1 298 -13 1573 175 79 18 chr18 43237373 43237716 -43439832 - MLT1A1 LTR MaLR -1 364 1 1991 152 13 3 chr18 43238171 43238474 -43439074 + AluSx SINE Alu 1 306 -6 1616 218 62 19 chr18 43238526 43239008 -43438540 - MER113 DNA MER1_type? 0 521 19 957 49 0 0 chr18 43240462 43240584 -43436964 - L1PA5 LINE L1 0 6154 6033 21 0 0 0 chr18 43241068 43241089 -43436459 + AT_rich Low_complexity Low_complexity 1 21 0 187 294 20 0 chr18 43241608 43241659 -43435889 - MIR SINE MIR 0 262 211 185 291 223 0 chr18 43241854 43241957 -43435591 - MIR3 SINE MIR -50 158 33 295 295 29 9 chr18 43242159 43242264 -43435284 - MIR SINE MIR -75 187 81 224 100 25 0 chr18 43243266 43243306 -43434242 + (GA)n Simple_repeat Simple_repeat 2 42 0 429 259 14 84 chr18 43248690 43248802 -43428746 - L2 LINE L2 -1 3312 3211 1504 229 8 25 chr18 43248802 43249195 -43428353 - MLT1B LTR MaLR -2 388 3 429 259 14 84 chr18 43249195 43249225 -43428323 - L2 LINE L2 -102 3211 3180 27 0 0 0 chr18 43250380 43250407 -43427141 + AT_rich Low_complexity Low_complexity 1 27 0 1836 144 48 3 chr18 43250753 43251044 -43426504 - AluSx SINE Alu -8 304 1 268 343 28 31 chr18 43252169 43252458 -43425090 + L1ME2 LINE L1 81 368 -6028 1060 285 61 31 chr18 43252814 43253703 -43423845 + L1ME2 LINE L1 661 1620 -4776 40681 34 21 2 chr18 43253714 43259741 -43417807 + L1PA2 LINE L1 4 6151 -4 1038 272 76 24 chr18 43259745 43260366 -43417182 + L1ME2 LINE L1 1627 2279 -4117 991 209 58 61 chr18 43260374 43260737 -43416811 + L1ME2 LINE L1 4910 5271 -944 1650 171 16 38 chr18 43260738 43261025 -43416523 + AluJb SINE Alu 1 282 -30 312 27 0 0 chr18 43261025 43261062 -43416486 + (GGGAA)n Simple_repeat Simple_repeat 3 39 0 1650 171 16 38 chr18 43261062 43261090 -43416458 + AluJb SINE Alu 282 309 -3 549 188 22 28 chr18 43261090 43261271 -43416277 + GA-rich Low_complexity Low_complexity 1 180 0 818 97 40 17 chr18 43261287 43261462 -43416086 + GA-rich Low_complexity Low_complexity 1 179 0 604 194 14 0 chr18 43261476 43261620 -43415928 + GA-rich Low_complexity Low_complexity 3 148 0 236 175 0 35 chr18 43261621 43261678 -43415870 + Tigger1 DNA MER2_type 694 748 -1670 * 8221 138 23 13 chr18 43261677 43263101 -43414447 + Tigger1 DNA MER2_type 980 2418 0 928 198 29 81 chr18 43263103 43263447 -43414101 + L1ME2 LINE L1 5871 6196 -37 255 248 101 40 chr18 43263447 43263596 -43413952 + L1ME LINE L1 5701 5858 -312 511 189 92 44 chr18 43263989 43264217 -43413331 + L1MEc LINE L1 2232 2470 -3745 280 364 38 23 chr18 43265589 43265721 -43411827 - L2 LINE L2 -3 3269 3136 800 262 10 19 chr18 43266209 43266415 -43411133 - MIR SINE MIR -12 250 47 318 333 94 0 chr18 43267275 43267446 -43410102 + MIR SINE MIR 20 206 -56 381 58 0 0 chr18 43267485 43267537 -43410011 + (TG)n Simple_repeat Simple_repeat 2 53 0 1397 193 177 31 chr18 43267934 43268318 -43409230 - MLT1D LTR MaLR 0 505 66 267 347 8 32 chr18 43269809 43269933 -43407615 + MIR3 SINE MIR 71 191 -17 815 213 110 0 chr18 43270858 43271022 -43406526 + MER5A DNA MER1_type 6 187 -2 422 165 0 12 chr18 43272195 43272280 -43405268 + GA-rich Low_complexity Low_complexity 4 87 0 219 298 0 0 chr18 43273583 43273640 -43403908 + L2 LINE L2 3210 3266 -6 635 163 16 39 chr18 43273871 43274000 -43403548 - MER3 DNA MER1_type -83 126 1 1701 227 46 26 chr18 43274865 43275323 -43402225 + MLT1C LTR MaLR 1 467 0 772 258 107 84 chr18 43275456 43275799 -43401749 + MLT1J1 LTR MaLR 34 390 -60 635 234 32 73 chr18 43275799 43276017 -43401531 - MER63A DNA MER1_type -1 209 1 772 258 107 84 chr18 43276017 43276066 -43401482 + MLT1J1 LTR MaLR 390 436 -14 802 310 58 36 chr18 43276495 43276968 -43400580 - LTR16B LTR ERVL 0 464 6 608 256 109 0 chr18 43277549 43277760 -43399788 - L1MD2 LINE L1 -435 5924 5691 * 1541 250 31 93 chr18 43277743 43278528 -43399020 - L1MD2 LINE L1 -743 5403 4668 308 329 14 0 chr18 43278683 43278823 -43398725 + MER103 DNA DNA 21 162 -4 221 375 133 0 chr18 43280149 43280269 -43397279 - L2 LINE L2 -3 3269 3134 186 103 0 0 chr18 43280473 43280502 -43397046 + (CA)n Simple_repeat Simple_repeat 1 29 0 323 347 47 38 chr18 43282404 43282617 -43394931 - L3 LINE CR1 -98 1479 1265 2362 88 0 25 chr18 43282742 43283060 -43394488 + AluY SINE Alu 1 310 -1 312 332 186 0 chr18 43283182 43283381 -43394167 + MIR SINE MIR 21 256 -6 243 0 0 0 chr18 43284314 43284341 -43393207 + (CA)n Simple_repeat Simple_repeat 1 27 0 210 156 0 0 chr18 43284593 43284638 -43392910 + GA-rich Low_complexity Low_complexity 1 45 0 282 259 71 36 chr18 43285100 43285212 -43392336 + LTR50 LTR ERVL 1 116 -679 574 255 146 4 chr18 43285225 43285464 -43392084 + LTR50 LTR ERVL 521 793 -2 549 302 120 19 chr18 43285655 43286062 -43391486 + LTR33A LTR ERVL 3 521 -2 546 235 23 30 chr18 43286577 43286709 -43390839 - MIR SINE MIR -71 191 61 299 285 65 21 chr18 43287112 43287298 -43390250 + L3 LINE CR1 1075 1268 -309 1600 219 134 30 chr18 43287941 43288439 -43389109 + MER92C LTR ERV1 1 550 -4 1044 169 24 14 chr18 43289847 43290054 -43387494 + AluY SINE Alu 1 209 -102 477 0 0 0 chr18 43292047 43292100 -43385448 + (TG)n Simple_repeat Simple_repeat 2 54 0 488 284 115 41 chr18 43293510 43293753 -43383795 + LTR16A1 LTR ERVL 197 457 0 279 335 110 12 chr18 43293765 43293938 -43383610 + L2 LINE L2 2302 2491 -823 1685 144 78 0 chr18 43294589 43294860 -43382688 + AluSc SINE Alu 3 294 -15 2375 153 18 40 chr18 43294984 43295428 -43382120 - Tigger2a DNA MER2_type 0 434 1 319 313 12 44 chr18 43295571 43295731 -43381817 + MLT1J2 LTR MaLR 263 417 -33 187 281 70 18 chr18 43295792 43295849 -43381699 + L2 LINE L2 3208 3267 -5 301 254 67 30 chr18 43297476 43297641 -43379907 - Charlie7 DNA MER1_type -1 2611 2441 769 17 42 17 chr18 43298837 43298956 -43378592 + (TTTC)n Simple_repeat Simple_repeat 3 124 0 221 328 0 0 chr18 43299146 43299207 -43378341 - MIR3 SINE MIR -7 201 141 320 308 55 48 chr18 43300055 43300201 -43377347 - MIR3 SINE MIR -41 167 21 258 352 80 37 chr18 43300366 43300528 -43377020 - L2 LINE L2 -4 3268 3100 600 305 82 96 chr18 43300574 43301347 -43376201 + L2 LINE L2 2214 2975 -339 348 325 100 93 chr18 43301398 43301687 -43375861 + L2 LINE L2 2980 3270 -2 182 294 157 20 chr18 43301816 43301918 -43375630 + L3 LINE CR1 1040 1155 -422 191 338 25 0 chr18 43302277 43302357 -43375191 - MIR3 SINE MIR -22 186 105 2417 338 98 5 chr18 43303282 43304575 -43372973 + L2 LINE L2 1869 3293 -20 186 43 0 0 chr18 43304588 43304611 -43372937 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 954 89 0 0 chr18 43304946 43305081 -43372467 + AluY SINE Alu 175 309 -2 193 309 0 0 chr18 43305475 43305530 -43372018 + L2 LINE L2 3247 3301 -12 304 352 64 11 chr18 43305571 43305747 -43371801 + MIR SINE MIR 34 217 -45 584 301 30 24 chr18 43305835 43306001 -43371547 + MER5B DNA MER1_type 6 172 -6 909 275 5 5 chr18 43306009 43306227 -43371321 + MIR SINE MIR 33 250 -12 208 263 40 26 chr18 43307849 43307925 -43369623 + L3 LINE CR1 1061 1137 -440 22 35 0 0 chr18 43308320 43308349 -43369199 + AT_rich Low_complexity Low_complexity 1 29 0 2096 242 22 50 chr18 43308449 43309305 -43368243 + L1MB7 LINE L1 3217 4048 -2098 1215 191 97 17 chr18 43309427 43309778 -43367770 + L1MB7 LINE L1 4886 5264 -882 1818 195 5 18 chr18 43309780 43310164 -43367384 + L1MB7 LINE L1 5786 6164 -20 525 293 90 55 chr18 43310911 43311201 -43366347 - MLT1I LTR MaLR 0 409 110 1786 156 31 6 chr18 43311212 43311538 -43366010 + L1PA16 LINE L1 5815 6148 -18 386 316 176 5 chr18 43312587 43312780 -43364768 - MIR SINE MIR -34 228 3 402 329 15 35 chr18 43314065 43314243 -43363305 - MIR SINE MIR -21 187 13 190 293 35 0 chr18 43317455 43317513 -43360035 - L3 LINE CR1 -925 652 593 21 0 0 0 chr18 43317752 43317773 -43359775 + AT_rich Low_complexity Low_complexity 1 21 0 416 294 122 22 chr18 43320561 43320741 -43356807 - MIR SINE MIR 0 262 65 607 308 42 5 chr18 43321134 43321348 -43356200 + MIR SINE MIR 38 259 -3 870 176 0 17 chr18 43322088 43322264 -43355284 - L1MA9 LINE L1 -1 6311 6139 307 338 68 27 chr18 43324006 43324225 -43353323 + MIR SINE MIR 9 236 -26 267 343 9 0 chr18 43324229 43324334 -43353214 + CT-rich Low_complexity Low_complexity 2 107 0 274 56 19 37 chr18 43324584 43324638 -43352910 + (TTG)n Simple_repeat Simple_repeat 2 54 0 22 0 0 0 chr18 43324784 43324806 -43352742 + AT_rich Low_complexity Low_complexity 1 22 0 1762 145 16 41 chr18 43324998 43325316 -43352232 + AluSx SINE Alu 1 310 -2 719 250 23 51 chr18 43325377 43325593 -43351955 + MER63A DNA MER1_type 1 210 0 278 167 0 0 chr18 43326057 43326105 -43351443 + MER63 DNA MER1_type 713 760 -302 232 274 0 0 chr18 43326103 43326154 -43351394 + MER63 DNA MER1_type 984 1034 -27 * 268 342 57 25 chr18 43326309 43326467 -43351081 + MIR3 SINE MIR 40 202 -6 21 0 0 0 chr18 43328917 43328938 -43348610 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr18 43329019 43329041 -43348507 + AT_rich Low_complexity Low_complexity 1 22 0 431 189 11 43 chr18 43329048 43329226 -43348322 - L1MA9 LINE L1 -47 6265 5994 288 123 3 0 chr18 43329228 43329280 -43348268 + L1MA9 LINE L1 5933 5985 -306 2655 100 22 5 chr18 43330524 43330944 -43346604 - MER51A LTR ERV1 0 634 121 21 36 0 0 chr18 43331635 43331663 -43345885 + AT_rich Low_complexity Low_complexity 1 28 0 707 249 194 5 chr18 43333843 43334044 -43343504 + MIR SINE MIR 20 258 -4 261 0 0 0 chr18 43334478 43334507 -43343041 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 370 235 20 20 chr18 43334916 43335014 -43342534 - LTR16A LTR ERVL -172 278 181 180 0 0 0 chr18 43335447 43335467 -43342081 + (TTG)n Simple_repeat Simple_repeat 2 21 0 592 359 99 26 chr18 43337116 43337540 -43340008 - L2 LINE L2 0 3272 2818 27 62 0 0 chr18 43338068 43338116 -43339432 + AT_rich Low_complexity Low_complexity 1 48 0 202 299 0 0 chr18 43338143 43338210 -43339338 + A-rich Low_complexity Low_complexity 1 67 0 429 54 0 0 chr18 43338727 43338783 -43338765 + (CA)n Simple_repeat Simple_repeat 2 57 0 268 280 20 30 chr18 43338934 43339034 -43338514 - MIR SINE MIR -67 141 43 2404 140 50 48 chr18 43340957 43341437 -43336111 + L1MB3 LINE L1 5696 6176 -7 305 254 0 0 chr18 43341581 43341648 -43335900 - MIR SINE MIR -109 153 87 1058 177 43 35 chr18 43342103 43342335 -43335213 - MER96B DNA MER1_type? -182 235 2 200 139 0 23 chr18 43342357 43342400 -43335148 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 444 0 0 0 chr18 43344578 43344633 -43332915 + L1PA2 LINE L1 6098 6152 -3 304 264 196 43 chr18 43344660 43344823 -43332725 - MIR SINE MIR -26 236 49 299 197 158 0 chr18 43344880 43344956 -43332592 + L2 LINE L2 3226 3313 0 201 143 0 0 chr18 43345993 43346028 -43331520 + (CA)n Simple_repeat Simple_repeat 2 36 0 387 335 120 30 chr18 43346445 43346711 -43330837 - L3 LINE CR1 -23 1554 1265 22 35 0 0 chr18 43346800 43346829 -43330719 + AT_rich Low_complexity Low_complexity 1 29 0 1737 67 13 4 chr18 43346847 43347085 -43330463 - L1PA6 LINE L1 -2 6152 5913 195 341 71 32 chr18 43347087 43347213 -43330335 - L3 LINE CR1 -1408 169 39 249 180 0 0 chr18 43349287 43349337 -43328211 + A-rich Low_complexity Low_complexity 1 50 0 286 129 32 0 chr18 43349481 43349543 -43328005 + (TA)n Simple_repeat Simple_repeat 2 65 0 231 258 182 0 chr18 43350138 43350204 -43327344 - L2 LINE L2 -9 3304 3227 780 243 63 0 chr18 43350320 43350509 -43327039 - MER63A DNA MER1_type -4 206 6 21 57 0 0 chr18 43351190 43351225 -43326323 + AT_rich Low_complexity Low_complexity 1 35 0 2776 66 11 0 chr18 43351554 43351918 -43325630 - L1PB1 LINE L1 -2 6149 5782 308 270 22 11 chr18 43351925 43352014 -43325534 + L1MC4 LINE L1 6614 6703 -1339 265 216 21 41 chr18 43352023 43352120 -43325428 - L1MC4 LINE L1 -1339 6703 6609 * 1117 81 0 25 chr18 43352104 43352265 -43325283 - L1P5 LINE L1 -360 5791 5635 21 36 0 0 chr18 43352682 43352710 -43324838 + AT_rich Low_complexity Low_complexity 1 28 0 252 258 30 0 chr18 43352734 43352800 -43324748 - MIR SINE MIR -69 139 72 1558 178 33 11 chr18 43355832 43356108 -43321440 - AluJb SINE Alu -21 291 10 262 219 27 14 chr18 43356414 43356487 -43321061 - L1ME LINE L1 -226 5895 5822 309 315 49 35 chr18 43356759 43356962 -43320586 - MIR SINE MIR -20 242 37 1649 261 92 16 chr18 43357069 43357582 -43319966 - MLT1H1 LTR MaLR -3 552 1 349 319 51 41 chr18 43357642 43357658 -43319890 + L1ME3A LINE L1 5254 5268 -2540 887 206 34 15 chr18 43357658 43357862 -43319686 + MER3 DNA MER1_type 2 209 0 349 319 51 41 chr18 43357862 43358137 -43319411 + L1ME3A LINE L1 5268 5548 -2260 328 301 101 30 chr18 43358190 43358389 -43319159 + L1ME3A LINE L1 5682 5894 -276 206 119 48 0 chr18 43358541 43358583 -43318965 + GA-rich Low_complexity Low_complexity 1 44 0 347 89 18 0 chr18 43358746 43358802 -43318746 + (TGGA)n Simple_repeat Simple_repeat 1 57 0 255 75 25 0 chr18 43358937 43358977 -43318571 - MLT1D LTR MaLR 0 505 465 241 188 27 36 chr18 43359091 43359203 -43318345 + CT-rich Low_complexity Low_complexity 2 112 0 1190 251 71 41 chr18 43359510 43360000 -43317548 + MLT1D LTR MaLR 1 505 0 11108 143 48 12 chr18 43360431 43361425 -43316123 + Tigger1 DNA MER2_type 2 959 -1459 1944 113 29 51 chr18 43361425 43361736 -43315812 + AluSg1 SINE Alu 3 306 -3 11108 143 48 12 chr18 43361736 43362612 -43314936 + Tigger1 DNA MER2_type 959 1939 -479 1049 126 93 51 chr18 43362612 43362728 -43314820 + Tigger1 DNA MER2_type 2194 2304 -114 1934 144 7 20 chr18 43362728 43363027 -43314521 - AluSq SINE Alu -18 295 1 1049 126 93 51 chr18 43363027 43363125 -43314423 + Tigger1 DNA MER2_type 2304 2417 -1 590 223 8 39 chr18 43363196 43363326 -43314222 - MER5B DNA MER1_type -6 172 47 1188 219 68 12 chr18 43363380 43363704 -43313844 + L1ME3 LINE L1 5613 5954 -208 1172 185 0 40 chr18 43363801 43364028 -43313520 - AluJb SINE Alu -94 218 1 2530 62 0 0 chr18 43364054 43364360 -43313188 - AluY SINE Alu -5 306 1 259 292 0 0 chr18 43364360 43364425 -43313123 - MER5B DNA MER1_type -112 66 2 251 268 24 32 chr18 43366652 43366775 -43310773 + GA-rich Low_complexity Low_complexity 1 122 0 338 267 153 7 chr18 43368742 43368892 -43308656 + MER5B DNA MER1_type 7 178 0 31 0 0 0 chr18 43368896 43368927 -43308621 + AT_rich Low_complexity Low_complexity 1 31 0 237 308 55 22 chr18 43370607 43370698 -43306850 + L2 LINE L2 3138 3231 -41 215 127 0 55 chr18 43370931 43370986 -43306562 + (TAAAAA)n Simple_repeat Simple_repeat 5 56 0 2348 99 3 0 chr18 43371051 43371363 -43306185 - AluSp SINE Alu 0 313 1 248 279 0 0 chr18 43373146 43373207 -43304341 + (ATG)n Simple_repeat Simple_repeat 2 62 0 203 136 0 45 chr18 43373261 43373305 -43304243 + (CAAAAA)n Simple_repeat Simple_repeat 1 42 0 22 0 0 0 chr18 43373945 43373967 -43303581 + AT_rich Low_complexity Low_complexity 1 22 0 299 299 39 24 chr18 43374002 43374129 -43303419 + L2 LINE L2 3179 3307 -6 297 75 0 0 chr18 43374178 43374218 -43303330 + (CA)n Simple_repeat Simple_repeat 1 40 0 253 324 102 9 chr18 43375434 43375542 -43302006 + L2 LINE L2 3151 3268 -4 217 250 205 32 chr18 43376692 43376848 -43300700 - MER91A DNA MER1_type -13 183 1 1817 128 8 0 chr18 43376895 43377145 -43300403 - AluSg SINE Alu -25 285 34 277 314 6 52 chr18 43378063 43378235 -43299313 + GA-rich Low_complexity Low_complexity 3 166 0 191 290 16 32 chr18 43378863 43378925 -43298623 + MIR SINE MIR 19 79 -129 236 283 0 0 chr18 43379265 43379325 -43298223 - MER5B DNA MER1_type 0 178 119 540 276 8 0 chr18 43379357 43379484 -43298064 + MER5B DNA MER1_type 51 178 0 476 263 83 21 chr18 43379882 43380064 -43297484 + MIR SINE MIR 16 207 -55 234 206 63 16 chr18 43382032 43382095 -43295453 - MIR SINE MIR -67 141 76 232 246 0 16 chr18 43383088 43383149 -43294399 + (CA)n Simple_repeat Simple_repeat 1 60 0 409 267 40 13 chr18 43385009 43385159 -43292389 + MIR SINE MIR 49 202 -60 227 116 47 0 chr18 43386981 43387024 -43290524 + CT-rich Low_complexity Low_complexity 1 45 0 2091 145 0 0 chr18 43387911 43388221 -43289327 + AluSx SINE Alu 1 310 -2 258 244 51 13 chr18 43388269 43388347 -43289201 + MLT1J2 LTR MaLR 3 83 -367 353 301 66 36 chr18 43388441 43388637 -43288911 + MLT1J2 LTR MaLR 240 441 -9 21 0 0 0 chr18 43389030 43389051 -43288497 + AT_rich Low_complexity Low_complexity 1 21 0 1935 151 20 8 chr18 43389110 43389461 -43288087 + L1MB1 LINE L1 5813 6167 -1 24 0 0 0 chr18 43389461 43389485 -43288063 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr18 43389542 43389565 -43287983 + AT_rich Low_complexity Low_complexity 1 23 0 452 284 124 26 chr18 43389716 43389910 -43287638 - MIR SINE MIR -44 218 6 585 310 18 0 chr18 43390685 43390856 -43286692 - MIR SINE MIR -13 249 76 23 0 0 0 chr18 43391632 43391655 -43285893 + AT_rich Low_complexity Low_complexity 1 23 0 40976 33 22 2 chr18 43393214 43398970 -43278578 + L1HS LINE L1 1 5879 -276 2377 14 0 0 chr18 43399070 43399354 -43278194 + L1HS LINE L1 5871 6154 -1 270 125 0 0 chr18 43399356 43399404 -43278144 + (A)n Simple_repeat Simple_repeat 1 48 0 388 200 67 0 chr18 43399416 43399506 -43278042 + L1MA9 LINE L1 6179 6274 -38 203 179 0 0 chr18 43399506 43399545 -43278003 + A-rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr18 43399762 43399800 -43277748 + AT_rich Low_complexity Low_complexity 1 38 0 186 320 115 13 chr18 43400144 43400222 -43277326 - L2 LINE L2 -1 3271 3186 2154 140 0 0 chr18 43400706 43400999 -43276549 + AluSx SINE Alu 1 293 -19 27 49 0 0 chr18 43402746 43402787 -43274761 + AT_rich Low_complexity Low_complexity 1 41 0 622 264 122 15 chr18 43402865 43403062 -43274486 - MIR SINE MIR -28 234 17 185 339 15 0 chr18 43403156 43403221 -43274327 - L2 LINE L2 0 3272 3207 683 233 18 68 chr18 43403246 43403465 -43274083 - MER82 DNA MER2_type -2 651 444 342 0 0 0 chr18 43403604 43403642 -43273906 + (CA)n Simple_repeat Simple_repeat 2 39 0 254 122 0 20 chr18 43403642 43403691 -43273857 + (GA)n Simple_repeat Simple_repeat 1 48 0 204 289 19 0 chr18 43405407 43405459 -43272089 + L3 LINE CR1 1377 1429 -148 301 284 161 13 chr18 43405595 43405750 -43271798 - MIR SINE MIR 0 262 85 994 198 128 44 chr18 43405750 43406133 -43271415 - Zaphod DNA AcHobo -14 4017 3603 2667 226 95 31 chr18 43406138 43407068 -43270480 - Zaphod DNA AcHobo -3041 990 2 631 233 33 7 chr18 43408416 43408566 -43268982 + MIR SINE MIR 2 155 -107 441 224 10 0 chr18 43408680 43408778 -43268770 + MIR SINE MIR 151 249 -13 524 302 34 20 chr18 43409471 43409700 -43267848 + MIR SINE MIR 20 248 -14 22 0 0 0 chr18 43410374 43410396 -43267152 + AT_rich Low_complexity Low_complexity 1 22 0 383 274 20 55 chr18 43411639 43411688 -43265860 + MIR SINE MIR 103 152 -110 2120 106 3 0 chr18 43411688 43411999 -43265549 + AluSp SINE Alu 1 312 0 383 274 20 55 chr18 43411999 43412094 -43265454 + MIR SINE MIR 152 243 -19 335 308 0 17 chr18 43412471 43412588 -43264960 + GA-rich Low_complexity Low_complexity 3 117 0 181 204 23 23 chr18 43413140 43413184 -43264364 - MIR3 SINE MIR -21 187 144 346 351 0 0 chr18 43413332 43413426 -43264122 + L2 LINE L2 3178 3271 -1 237 279 208 26 chr18 43414197 43414351 -43263197 - L3 LINE CR1 -88 1489 1308 326 324 28 0 chr18 43415414 43415522 -43262026 - L2 LINE L2 -4 3309 3199 358 309 154 5 chr18 43416039 43416227 -43261321 + MLT1J LTR MaLR 3 218 -293 289 324 14 62 chr18 43417016 43417161 -43260387 + MIR3 SINE MIR 65 202 -6 631 233 33 7 chr18 43617804 43617954 -43059594 + MIR SINE MIR 2 155 -107 441 224 10 0 chr18 43618068 43618166 -43059382 + MIR SINE MIR 151 249 -13 534 299 34 20 chr18 43618859 43619088 -43058460 + MIR SINE MIR 20 248 -14 22 0 0 0 chr18 43619762 43619784 -43057764 + AT_rich Low_complexity Low_complexity 1 22 0 383 274 20 55 chr18 43621027 43621076 -43056472 + MIR SINE MIR 103 152 -110 2120 106 3 0 chr18 43621076 43621387 -43056161 + AluSp SINE Alu 1 312 0 383 274 20 55 chr18 43621387 43621482 -43056066 + MIR SINE MIR 152 243 -19 335 308 0 17 chr18 43621859 43621976 -43055572 + GA-rich Low_complexity Low_complexity 3 117 0 181 204 23 23 chr18 43622528 43622572 -43054976 - MIR3 SINE MIR -21 187 144 346 351 0 0 chr18 43622720 43622814 -43054734 + L2 LINE L2 3178 3271 -1 237 279 208 26 chr18 43623585 43623739 -43053809 - L3 LINE CR1 -88 1489 1308 326 324 28 0 chr18 43624802 43624910 -43052638 - L2 LINE L2 -4 3309 3199 358 309 154 5 chr18 43625427 43625615 -43051933 + MLT1J LTR MaLR 3 218 -293 279 319 21 62 chr18 43626404 43626548 -43051000 + MIR3 SINE MIR 65 202 -6 439 283 164 11 chr18 43627352 43627529 -43050019 + MIR SINE MIR 53 256 -6 378 343 35 7 chr18 43627596 43627739 -43049809 + MIR SINE MIR 28 174 -88 22 0 0 0 chr18 43628507 43628529 -43049019 + AT_rich Low_complexity Low_complexity 1 22 0 230 237 50 29 chr18 43628683 43628822 -43048726 + L1ME LINE L1 5174 5315 -831 631 301 109 18 chr18 43628986 43629382 -43048166 + L1ME LINE L1 5383 5814 -307 1219 273 71 26 chr18 43629433 43629907 -43047641 + MLT1G1 LTR MaLR 1 492 -98 428 259 52 0 chr18 43630035 43630151 -43047397 + MLT1G1 LTR MaLR 469 590 0 1063 247 28 8 chr18 43630236 43630487 -43047061 + MLT1A1 LTR MaLR 24 279 -86 549 0 0 0 chr18 43630494 43630555 -43046993 + (TG)n Simple_repeat Simple_repeat 2 62 0 236 196 22 0 chr18 43630722 43630768 -43046780 + GA-rich Low_complexity Low_complexity 3 49 0 502 299 33 29 chr18 43630846 43631077 -43046471 + MIR SINE MIR 17 248 -14 271 202 23 48 chr18 43632653 43632756 -43044792 + L1MC2 LINE L1 6232 6332 -2 378 330 47 38 chr18 43635124 43635336 -43042212 - MIR SINE MIR 0 262 49 495 259 106 17 chr18 43635401 43635637 -43041911 - MIR SINE MIR -2 260 4 1851 178 7 0 chr18 43636619 43636912 -43040636 - AluJb SINE Alu -17 295 1 21 36 0 0 chr18 43637841 43637869 -43039679 + AT_rich Low_complexity Low_complexity 1 28 0 603 246 78 42 chr18 43638423 43638614 -43038934 - MIR SINE MIR -35 227 30 346 218 9 55 chr18 43638792 43638902 -43038646 + MER74B LTR ERVL 69 173 -449 * 473 275 81 21 chr18 43638896 43639132 -43038416 + MER74B LTR ERVL 299 548 -74 1155 218 59 53 chr18 43639290 43639629 -43037919 + MER58B DNA MER1_type 1 341 0 1786 130 171 19 chr18 43640413 43640729 -43036819 - THE1B LTR MaLR 0 364 1 11769 94 5 2 chr18 43640730 43642303 -43035245 - THE1B-int LTR MaLR -1 1579 2 1679 135 186 19 chr18 43642304 43642616 -43034932 - THE1B LTR MaLR 0 364 1 609 125 25 8 chr18 43642760 43642880 -43034668 + GA-rich Low_complexity Low_complexity 4 125 0 190 362 43 14 chr18 43643529 43643598 -43033950 + MIR SINE MIR 42 112 -96 2382 142 0 8 chr18 43643761 43644128 -43033420 + THE1B LTR MaLR 1 364 0 277 325 36 72 chr18 43644264 43644458 -43033090 - L2 LINE L2 -337 2977 2791 205 160 40 53 chr18 43645326 43645401 -43032147 + (TTAAA)n Simple_repeat Simple_repeat 4 77 0 263 204 0 0 chr18 43645722 43645771 -43031777 - L2 LINE L2 -10 3303 3255 290 277 86 51 chr18 43645973 43646155 -43031393 + MIR SINE MIR 37 219 -43 422 305 85 18 chr18 43647314 43647478 -43030070 - MIR3 SINE MIR -3 205 31 230 277 85 0 chr18 43647521 43647615 -43029933 + MARNA DNA Mariner 147 248 -338 385 302 49 12 chr18 43650690 43650850 -43026698 + MIR SINE MIR 25 186 -66 207 274 0 0 chr18 43650983 43651034 -43026514 - L2 LINE L2 -1 3312 3262 273 333 88 22 chr18 43651667 43651960 -43025588 - L2 LINE L2 0 3313 2917 5351 128 25 20 chr18 43652111 43653305 -43024243 - L1PB2 LINE L1 -11 6140 4934 186 181 0 157 chr18 43653530 43653613 -43023935 - L2 LINE L2 -813 2501 2432 23 33 0 0 chr18 43653736 43653766 -43023782 + AT_rich Low_complexity Low_complexity 1 30 0 728 210 80 45 chr18 43654715 43654939 -43022609 + L1ME1 LINE L1 5933 6164 -2 188 324 139 28 chr18 43655114 43655222 -43022326 + L2 LINE L2 3141 3260 -12 1962 149 3 16 chr18 43655594 43655903 -43021645 - AluJo SINE Alu -7 305 1 204 40 0 0 chr18 43656514 43656539 -43021009 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 189 74 0 0 chr18 43657577 43657604 -43019944 + (TTTTTG)n Simple_repeat Simple_repeat 1 27 0 531 0 0 0 chr18 43658418 43658477 -43019071 + (TA)n Simple_repeat Simple_repeat 1 59 0 531 0 0 0 chr18 43659258 43659317 -43018231 + (TA)n Simple_repeat Simple_repeat 2 60 0 274 252 35 52 chr18 43659658 43659773 -43017775 - MIR SINE MIR -68 194 82 1747 172 33 10 chr18 43661418 43661720 -43015828 + AluJb SINE Alu 1 309 -3 207 267 0 0 chr18 43661770 43661815 -43015733 + MIR SINE MIR 108 152 -56 238 292 9 0 chr18 43661815 43661928 -43015620 + L1ME LINE L1 5742 5855 -266 214 284 86 25 chr18 43662089 43662170 -43015378 + MIR3 SINE MIR 121 206 -2 358 337 48 60 chr18 43662333 43662585 -43014963 + L2 LINE L2 3024 3272 0 1592 180 7 35 chr18 43663249 43663538 -43014010 + AluJo SINE Alu 2 282 -30 27 62 0 0 chr18 43663538 43663586 -43013962 + AT_rich Low_complexity Low_complexity 1 48 0 1247 317 108 31 chr18 43663646 43664459 -43013089 + L2 LINE L2 1734 2609 -705 526 288 81 54 chr18 43664815 43665037 -43012511 + MIR SINE MIR 9 236 -26 208 164 68 96 chr18 43665185 43665258 -43012290 - MIR SINE MIR -80 182 112 2280 143 89 0 chr18 43665294 43665687 -43011861 + MSTA LTR MaLR 1 428 0 264 306 18 18 chr18 43666319 43666430 -43011118 - MLT1L LTR MaLR -10 605 495 2158 111 0 14 chr18 43666545 43666880 -43010668 + AluY SINE Alu 1 331 0 489 293 46 8 chr18 43669541 43669776 -43007772 + MLT1G1 LTR MaLR 1 241 -308 235 208 21 0 chr18 43670237 43670285 -43007263 - L2 LINE L2 0 3272 3224 332 374 51 53 chr18 43670467 43670900 -43006648 - L2 LINE L2 -338 2976 2545 1368 181 60 4 chr18 43670983 43671268 -43006280 - AluJo SINE Alu 0 301 2 65 66 0 0 chr18 43671321 43671442 -43006106 + AT_rich Low_complexity Low_complexity 1 121 0 397 82 0 0 chr18 43671442 43671503 -43006045 - L1PB3 LINE L1 -2 6152 6092 1336 181 50 41 chr18 43671821 43672164 -43005384 - L1MA8 LINE L1 -3 6288 5943 2069 153 0 0 chr18 43672165 43672460 -43005088 - AluSx SINE Alu -17 295 1 2190 159 54 0 chr18 43672491 43673047 -43004501 - L1MA8 LINE L1 -591 5721 5137 605 250 7 7 chr18 43673486 43673622 -43003926 + AluJo SINE Alu 1 136 -176 336 250 75 0 chr18 43674641 43674721 -43002827 - MIR3 SINE MIR -11 197 112 256 270 0 16 chr18 43676925 43676988 -43000560 + GA-rich Low_complexity Low_complexity 1 62 0 251 250 74 56 chr18 43678004 43678112 -42999436 - L2 LINE L2 -17 3296 3187 186 43 0 0 chr18 43678457 43678480 -42999068 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 528 302 9 30 chr18 43680667 43680858 -42996690 + MIR SINE MIR 63 249 -13 522 93 52 0 chr18 43681019 43681116 -42996432 + CT-rich Low_complexity Low_complexity 1 102 0 467 222 203 33 chr18 43681149 43681302 -42996246 - MER5A DNA MER1_type -2 187 9 674 290 33 25 chr18 43681456 43681701 -42995847 - MIR SINE MIR -10 252 6 227 173 0 19 chr18 43682135 43682187 -42995361 + MARNA DNA Mariner 186 236 -350 827 196 18 12 chr18 43682736 43682899 -42994649 + AluJo SINE Alu 137 300 -2 325 249 17 27 chr18 43682926 43683043 -42994505 - MIR SINE MIR -66 142 37 255 79 0 0 chr18 43683125 43683163 -42994385 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 180 200 0 0 chr18 43683153 43683198 -42994350 + GA-rich Low_complexity Low_complexity 4 48 0 * 2378 63 3 0 chr18 43683234 43683521 -42994027 - AluY SINE Alu -16 295 8 914 185 138 0 chr18 43684391 43684580 -42992968 - MER20 DNA MER1_type -4 215 1 207 69 0 0 chr18 43684763 43684792 -42992756 + (CAAAAA)n Simple_repeat Simple_repeat 5 33 0 1112 158 9 9 chr18 43685855 43686077 -42991471 + L1MA9 LINE L1 6047 6268 -44 255 310 58 11 chr18 43686100 43686187 -42991361 - MIR SINE MIR -78 130 40 2172 109 87 6 chr18 43686513 43686860 -42990688 - THE1C LTR MaLR 0 375 1 283 318 34 11 chr18 43687449 43687537 -42990011 - MIR SINE MIR -114 148 59 194 377 41 8 chr18 43688489 43688611 -42988937 - MIR3 SINE MIR -76 132 7 302 268 37 12 chr18 43688629 43688711 -42988837 - MIR SINE MIR -67 195 112 281 330 0 62 chr18 43689496 43689593 -42987955 + MIR3 SINE MIR 8 98 -110 263 259 0 17 chr18 43689729 43689787 -42987761 + MIR3 SINE MIR 110 166 -42 213 248 191 48 chr18 43689784 43689889 -42987659 + MER5A DNA MER1_type 20 139 -50 * 270 252 112 19 chr18 43690298 43690405 -42987143 + MER94 DNA DNA 5 121 -13 2217 134 0 3 chr18 43690480 43690793 -42986755 + AluSx SINE Alu 1 312 0 420 82 0 0 chr18 43690797 43690858 -42986690 + (GGGGA)n Simple_repeat Simple_repeat 5 65 0 198 0 0 0 chr18 43691561 43691583 -42985965 + (A)n Simple_repeat Simple_repeat 1 22 0 347 286 94 57 chr18 43693125 43693317 -42984231 + MIR SINE MIR 11 209 -53 4102 131 15 126 chr18 43693387 43694936 -42982612 + pTR5 LTR ERV1 743 2606 0 192 279 131 0 chr18 43694941 43695002 -42982546 + MIR SINE MIR 76 144 -118 2361 68 3 34 chr18 43695279 43695600 -42981948 + AluY SINE Alu 1 311 0 21 0 0 0 chr18 43698429 43698450 -42979098 + AT_rich Low_complexity Low_complexity 1 21 0 187 314 18 95 chr18 43698468 43698637 -42978911 - MIR SINE MIR -56 206 51 191 222 56 0 chr18 43698668 43698722 -42978826 - L2 LINE L2 0 3313 3257 882 282 75 0 chr18 43699416 43699657 -42977891 + MIR SINE MIR 1 259 -3 275 277 109 29 chr18 43699666 43699803 -42977745 - MIR SINE MIR -78 184 37 677 214 188 0 chr18 43700221 43700375 -42977173 - MER5A DNA MER1_type -3 186 4 471 322 39 11 chr18 43700383 43700563 -42976985 + MER5A DNA MER1_type 1 185 -4 298 300 38 50 chr18 43700421 43700566 -42976982 - MER5A DNA MER1_type -30 159 15 * 2127 127 0 7 chr18 43700566 43700866 -42976682 + AluSx SINE Alu 1 298 -14 298 300 38 50 chr18 43700866 43700880 -42976668 - MER5A DNA MER1_type -174 15 2 291 288 0 0 chr18 43700914 43700980 -42976568 + L2 LINE L2 3235 3300 -13 1960 101 4 4 chr18 43702026 43702293 -42975255 - AluSx SINE Alu -19 293 27 2177 137 22 25 chr18 43703393 43703758 -42973790 + THE1B LTR MaLR 1 364 0 212 342 154 0 chr18 43704474 43704623 -42972925 + MIR SINE MIR 90 261 -1 2048 115 39 16 chr18 43704825 43705130 -42972418 - AluSx SINE Alu 0 312 1 189 0 0 0 chr18 43705479 43705500 -42972048 + (A)n Simple_repeat Simple_repeat 1 21 0 432 267 130 0 chr18 43705711 43705842 -42971706 + MER45 DNA AcHobo 32 179 -1402 642 134 0 0 chr18 43706116 43706213 -42971335 + AluJb SINE Alu 199 295 -17 1425 185 9 89 chr18 43707558 43707882 -42969666 + AluJo SINE Alu 1 298 -14 548 342 73 16 chr18 43708178 43708561 -42968987 + MLT1K LTR MaLR 184 588 0 206 327 93 19 chr18 43708607 43708714 -42968834 - L2 LINE L2 -203 3069 2955 227 351 108 0 chr18 43709684 43709795 -42967753 + L2 LINE L2 3150 3272 0 220 279 0 33 chr18 43710247 43710308 -42967240 - L2 LINE L2 0 3313 3255 215 320 148 48 chr18 43710499 43710877 -42966671 - L2 LINE L2 -1333 1981 1566 463 248 54 0 chr18 43711369 43711498 -42966050 + MER117 DNA MER1_type 61 196 -1 2386 180 26 0 chr18 43711887 43712303 -42965245 - MSTA LTR MaLR 0 428 2 202 352 103 47 chr18 43712449 43712858 -42964690 + L2 LINE L2 2841 3272 0 211 189 0 0 chr18 43714999 43715036 -42962512 + GA-rich Low_complexity Low_complexity 4 40 0 2010 124 3 7 chr18 43715561 43715852 -42961696 + AluSx SINE Alu 1 290 -22 23 54 0 0 chr18 43715856 43715893 -42961655 + AT_rich Low_complexity Low_complexity 1 37 0 1459 222 40 8 chr18 43716049 43716419 -42961129 + MER119 DNA MER1_type 148 529 -54 642 179 197 96 chr18 43716831 43717049 -42960499 + MIR SINE MIR 2 241 -21 329 327 44 18 chr18 43717059 43717172 -42960376 + L2 LINE L2 3182 3297 -16 1847 171 0 7 chr18 43717451 43717750 -42959798 + AluJo SINE Alu 1 297 -15 488 194 16 0 chr18 43718057 43718186 -42959362 + L1MD3 LINE L1 7841 7971 -24 21 36 0 0 chr18 43718203 43718231 -42959317 + AT_rich Low_complexity Low_complexity 1 28 0 2127 174 78 0 chr18 43718470 43718867 -42958681 + MSTA LTR MaLR 1 428 0 260 141 0 94 chr18 43719536 43719600 -42957948 - L2 LINE L2 0 3313 3256 2191 111 14 12 chr18 43720173 43720578 -42956970 + L1PB1 LINE L1 5805 6210 0 367 80 0 0 chr18 43720845 43720895 -42956653 + MER63 DNA MER1_type 1 50 -880 1391 223 27 0 chr18 43720902 43721239 -42956309 + MER63 DNA MER1_type 425 770 -290 1467 130 9 30 chr18 43721351 43721581 -42955967 - AluSq SINE Alu -88 225 1 2551 167 36 102 chr18 43722389 43723132 -42954416 + LTR8A LTR ERV1 34 727 0 545 180 18 9 chr18 43723200 43723311 -42954237 - LTR23 LTR ERV1 -1 436 325 277 75 0 0 chr18 43723306 43723346 -42954202 + LTR23 LTR ERV1 398 437 0 * 1050 33 0 0 chr18 43724006 43724127 -42953421 - AluY SINE Alu -14 297 177 199 310 140 10 chr18 43724597 43724697 -42952851 - MIR SINE MIR -66 142 30 655 275 32 28 chr18 43724860 43725078 -42952470 + MIR SINE MIR 2 220 -42 201 121 0 0 chr18 43726075 43726108 -42951440 + (TA)n Simple_repeat Simple_repeat 1 33 0 345 325 186 5 chr18 43727318 43727512 -42950036 - L3 LINE CR1 -160 1417 1189 294 340 0 11 chr18 43727512 43727606 -42949942 + L2 LINE L2 3221 3313 0 1222 312 59 42 chr18 43727669 43728192 -42949356 - L3 LINE CR1 -467 1110 579 354 240 184 32 chr18 43728651 43728776 -42948772 + MIR3 SINE MIR 35 178 -30 282 180 0 0 chr18 43729335 43729385 -42948163 - MLT1K LTR MaLR 0 588 539 276 278 0 125 chr18 43729407 43729583 -42947965 - MLT1K LTR MaLR -158 430 277 1573 207 45 11 chr18 43729942 43730295 -42947253 + MLT1A1 LTR MaLR 1 365 0 2866 218 59 60 chr18 43730298 43731689 -42945859 + MLT1A1-int LTR MaLR 3 1735 0 2149 192 3 0 chr18 43731689 43732053 -42945495 + MLT1A1 LTR MaLR 1 365 0 2512 53 0 0 chr18 43734555 43734855 -42942693 + AluY SINE Alu 1 300 -11 1167 224 96 107 chr18 43735055 43735507 -42942041 - MLT1H LTR MaLR 0 549 102 1751 158 14 17 chr18 43735507 43735824 -42941724 + AluJb SINE Alu 1 312 0 1167 224 96 107 chr18 43735824 43735884 -42941664 - MLT1H LTR MaLR -447 102 43 2227 129 0 0 chr18 43736189 43736500 -42941048 + AluY SINE Alu 1 311 0 538 189 87 24 chr18 43737634 43737840 -42939708 - Charlie1 DNA MER1_type -98 2663 2445 529 221 0 29 chr18 43737842 43737978 -42939570 + MER89-int LTR ERV1 5290 5421 -1380 2801 197 44 22 chr18 43737993 43738715 -42938833 - Charlie1 DNA MER1_type -300 2461 1724 321 188 0 119 chr18 43738875 43738976 -42938572 + MER21B LTR ERV1 2 90 -773 2528 231 88 26 chr18 43738998 43739740 -42937808 + MER21B LTR ERV1 19 806 -57 1063 290 71 84 chr18 43739761 43740093 -42937455 - L3 LINE CR1 -19 1558 1223 390 91 0 0 chr18 43740093 43740148 -42937400 + (CA)n Simple_repeat Simple_repeat 1 55 0 1063 290 71 84 chr18 43740148 43740646 -42936902 - L3 LINE CR1 -354 1223 739 525 298 70 57 chr18 43740681 43740808 -42936740 + MLT1J2 LTR MaLR 42 166 -284 1363 201 20 92 chr18 43740808 43741200 -42936348 - MLT1A1 LTR MaLR -1 364 1 525 298 70 57 chr18 43741200 43741455 -42936093 + MLT1J2 LTR MaLR 166 429 -21 418 314 50 81 chr18 43741714 43741975 -42935573 + L2 LINE L2 3020 3272 0 2311 52 24 14 chr18 43742290 43742581 -42934967 - AluY SINE Alu -17 294 1 255 125 0 0 chr18 43744471 43744511 -42933037 + (CA)n Simple_repeat Simple_repeat 1 40 0 327 268 109 84 chr18 43745238 43745477 -42932071 + MIR SINE MIR 4 248 -14 253 279 0 0 chr18 43745948 43746009 -42931539 + MLT1K LTR MaLR 161 221 -367 23 0 0 0 chr18 43746285 43746308 -42931240 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr18 43750442 43750463 -42927085 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 452 254 130 51 chr18 43750819 43750996 -42926552 + MIR SINE MIR 72 262 0 199 338 0 14 chr18 43750992 43751063 -42926485 + L2 LINE L2 3203 3272 0 * 271 306 40 16 chr18 43751702 43751826 -42925722 + MIR SINE MIR 65 191 -71 394 308 154 13 chr18 43752044 43752498 -42925050 + L1ME2 LINE L1 5367 5884 -280 494 208 0 0 chr18 43752762 43752858 -42924690 + MIR3 SINE MIR 111 206 -2 2839 175 40 21 chr18 43752944 43754063 -42923485 + L1MB7 LINE L1 4741 5886 -298 1980 169 7 0 chr18 43754063 43754371 -42923177 + AluSx SINE Alu 1 310 -2 2839 175 40 21 chr18 43754371 43754385 -42923163 + L1MB7 LINE L1 5886 5898 -286 732 139 81 7 chr18 43754390 43754646 -42922902 + MLT1A1 LTR MaLR 2 353 -12 1363 163 35 7 chr18 43754653 43754935 -42922613 + L1MB7 LINE L1 5894 6183 -1 23 68 0 0 chr18 43754961 43755005 -42922543 + AT_rich Low_complexity Low_complexity 1 44 0 2315 108 0 0 chr18 43755457 43755762 -42921786 + AluSq SINE Alu 4 308 -5 292 263 150 0 chr18 43757056 43757189 -42920359 + MLT1I LTR MaLR 257 409 0 2169 130 0 0 chr18 43758179 43758487 -42919061 + AluSg SINE Alu 1 308 -2 180 287 81 23 chr18 43758900 43758987 -42918561 + MIR SINE MIR 41 132 -130 299 311 41 41 chr18 43759609 43759731 -42917817 + L2 LINE L2 3140 3261 -11 25 0 0 0 chr18 43759873 43759898 -42917650 + AT_rich Low_complexity Low_complexity 1 25 0 2220 202 36 8 chr18 43759997 43760641 -42916907 - L1MDb LINE L1 -4882 1658 994 25 0 0 0 chr18 43761505 43761530 -42916018 + AT_rich Low_complexity Low_complexity 1 25 0 637 250 136 18 chr18 43761613 43761833 -42915715 - L1MDb LINE L1 -6190 350 105 513 253 68 26 chr18 43762433 43762698 -42914850 - L1ME4a LINE L1 -206 5915 5640 632 30 0 40 chr18 43763919 43764018 -42913530 + (GGAA)n Simple_repeat Simple_repeat 4 98 0 2314 104 0 3 chr18 43764270 43764578 -42912970 - AluSg SINE Alu -3 307 1 189 354 0 0 chr18 43764892 43764940 -42912608 + L2 LINE L2 3245 3292 -21 271 279 39 39 chr18 43764996 43765100 -42912448 - MIR SINE MIR -66 142 39 213 154 0 0 chr18 43765490 43765529 -42912019 + (TATATG)n Simple_repeat Simple_repeat 3 41 0 181 229 21 0 chr18 43765619 43765667 -42911881 + MIR SINE MIR 170 218 -44 1785 193 3 0 chr18 43765866 43766166 -42911382 + AluJb SINE Alu 1 301 -11 508 211 75 31 chr18 43766292 43766453 -42911095 + MER34 LTR ERV1 373 540 -2 419 333 91 24 chr18 43766473 43766812 -42910736 + L2 LINE L2 160 521 -2793 590 235 191 9 chr18 43766814 43767044 -42910504 - ORSL DNA AcHobo -1 274 3 245 50 0 25 chr18 43767091 43767131 -42910417 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 1604 185 3 41 chr18 43769144 43769463 -42908085 + AluJb SINE Alu 3 309 -3 462 105 42 21 chr18 43769463 43769558 -42907990 + GA-rich Low_complexity Low_complexity 1 97 0 228 135 0 0 chr18 43770168 43770205 -42907343 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 450 232 105 0 chr18 43770208 43770303 -42907245 - FLAM_A SINE Alu -27 115 11 1240 221 55 12 chr18 43770321 43770753 -42906795 - MER92C LTR ERV1 -33 521 1 1308 208 96 30 chr18 43770883 43771278 -42906270 - LTR37A LTR ERV1 -4 422 2 1896 192 107 57 chr18 43771292 43771874 -42905674 - LTR36 LTR ERV1 0 611 1 2595 191 7 2 chr18 43771959 43772415 -42905133 + MLT1C LTR MaLR 10 467 0 3471 200 0 25 chr18 43772701 43773351 -42904197 + MER82 DNA MER2_type 14 647 -6 194 324 66 66 chr18 43773371 43773507 -42904041 + L2 LINE L2 3137 3272 0 2742 204 39 31 chr18 43774615 43774863 -42902685 - MER82 DNA MER2_type -1 652 407 2464 68 0 0 chr18 43774863 43775170 -42902378 - AluY SINE Alu -4 307 1 2742 204 39 31 chr18 43775170 43775567 -42901981 - MER82 DNA MER2_type -246 407 2 25 0 0 0 chr18 43776569 43776594 -42900954 + AT_rich Low_complexity Low_complexity 1 25 0 248 211 0 145 chr18 43776708 43776784 -42900764 + L2 LINE L2 3208 3272 0 232 310 124 16 chr18 43777037 43777166 -42900382 + MIR SINE MIR 64 206 -56 1351 211 33 30 chr18 43777277 43777638 -42899910 - MLT1A1 LTR MaLR 0 365 4 319 286 95 52 chr18 43777641 43777851 -42899697 - L2 LINE L2 -71 3242 3024 294 163 20 0 chr18 43778151 43778200 -42899348 - THE1A LTR MaLR -2 353 304 1708 193 0 7 chr18 43778748 43779049 -42898499 + AluJo SINE Alu 1 299 -13 382 122 40 0 chr18 43779049 43779123 -42898425 + GA-rich Low_complexity Low_complexity 1 77 0 237 311 104 37 chr18 43780396 43780560 -42896988 - L3 LINE CR1 -174 1403 1229 346 340 61 20 chr18 43780639 43780786 -42896762 - L3 LINE CR1 -351 1226 1074 2229 60 0 84 chr18 43780788 43781122 -42896426 + AluY SINE Alu 1 306 -5 269 68 0 0 chr18 43781226 43781270 -42896278 - Alu SINE Alu 0 302 259 313 318 70 8 chr18 43781410 43781539 -42896009 + MIR SINE MIR 12 148 -114 23 0 0 0 chr18 43782837 43782860 -42894688 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr18 43783319 43783342 -42894206 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 290 250 0 22 chr18 43783347 43783439 -42894109 + L1MC4 LINE L1 6614 6703 -1339 242 292 112 0 chr18 43783475 43783564 -42893984 - L1MC5 LINE L1 -48 7913 7815 271 221 132 52 chr18 43783573 43783709 -42893839 - L1MC5 LINE L1 -185 7776 7630 1677 122 17 0 chr18 43784242 43784480 -42893068 + AluSx SINE Alu 53 294 -18 1922 111 7 0 chr18 43785411 43785681 -42891867 - AluSx SINE Alu -5 307 36 1011 187 123 77 chr18 43787853 43788292 -42889256 - L1MC5 LINE L1 -791 7170 6712 235 32 0 0 chr18 43788465 43788496 -42889052 - L1MB7 LINE L1 -19 6165 6135 316 306 131 16 chr18 43788496 43788810 -42888738 - L1M4 LINE L1 -816 5330 4981 632 303 45 25 chr18 43788980 43789224 -42888324 + MIR SINE MIR 4 252 -10 321 314 127 16 chr18 43789248 43789500 -42888048 - L1M4 LINE L1 -1357 4789 4510 408 286 97 17 chr18 43790156 43790331 -42887217 - MER5A DNA MER1_type 0 189 1 198 0 0 0 chr18 43790852 43790874 -42886674 + (T)n Simple_repeat Simple_repeat 1 22 0 7500 43 1 11 chr18 43793091 43794034 -42883514 - L1P LINE L1 -1400 4746 3813 477 214 11 11 chr18 43794053 43794142 -42883406 + MER81 DNA DNA 10 98 -16 708 269 19 39 chr18 43794196 43794546 -42883002 + MLT1J1 LTR MaLR 55 446 0 2040 139 0 0 chr18 43795616 43795911 -42881637 + AluSx SINE Alu 1 295 -17 1126 107 0 48 chr18 43795911 43796079 -42881469 + AluSg/x SINE Alu 132 291 -19 42 20 0 0 chr18 43798522 43798571 -42878977 + AT_rich Low_complexity Low_complexity 1 49 0 734 242 96 114 chr18 43798856 43799406 -42878142 + MLT1H1 LTR MaLR 1 555 0 201 281 47 31 chr18 43799469 43799533 -42878015 - L2 LINE L2 -81 3191 3127 369 243 107 35 chr18 43799573 43799742 -42877806 - L1MC4a LINE L1 -1927 5881 5701 253 318 0 35 chr18 43800165 43800250 -42877298 + MIR SINE MIR 3 84 -178 26 50 0 0 chr18 43801694 43801734 -42875814 + AT_rich Low_complexity Low_complexity 1 40 0 29 78 0 0 chr18 43801998 43802062 -42875486 + AT_rich Low_complexity Low_complexity 1 64 0 1284 188 99 11 chr18 43803161 43803443 -42874105 - AluJo SINE Alu -3 309 3 1822 189 12 6 chr18 43803548 43803891 -42873657 + MER7A DNA MER2_type 2 344 -2 22 0 0 0 chr18 43804939 43804961 -42872587 + AT_rich Low_complexity Low_complexity 1 22 0 758 164 7 21 chr18 43805324 43805464 -42872084 + FLAM_C SINE Alu 1 138 -5 22 35 0 0 chr18 43807309 43807338 -42870210 + AT_rich Low_complexity Low_complexity 1 29 0 382 326 134 23 chr18 43807705 43808012 -42869536 + L3 LINE CR1 1198 1538 -39 454 294 142 30 chr18 43808583 43808837 -42868711 + L1M4 LINE L1 4757 4981 -1165 1685 177 7 10 chr18 43808837 43809131 -42868417 + AluJo SINE Alu 1 293 -19 454 294 142 30 chr18 43809131 43809411 -42868137 + L1M4 LINE L1 4981 5351 -795 29 0 0 0 chr18 43809417 43809446 -42868102 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr18 43810626 43810654 -42866894 + AT_rich Low_complexity Low_complexity 1 28 0 227 310 0 0 chr18 43811154 43811225 -42866323 + MIR SINE MIR 186 256 -6 452 265 191 6 chr18 43811708 43811870 -42865678 - MIR SINE MIR 0 262 71 23 0 0 0 chr18 43813113 43813136 -42864412 + AT_rich Low_complexity Low_complexity 1 23 0 262 61 0 0 chr18 43813366 43813399 -42864149 + MADE1 DNA Mariner 46 78 -2 21 57 0 0 chr18 43813798 43813833 -42863715 + AT_rich Low_complexity Low_complexity 1 35 0 2020 120 7 0 chr18 43814136 43814428 -42863120 - AluSq SINE Alu -13 300 7 1986 142 73 14 chr18 43814671 43815015 -42862533 - THE1B LTR MaLR 0 364 1 377 277 277 36 chr18 43815295 43815490 -42862058 - MIR SINE MIR 0 262 21 379 343 86 43 chr18 43816511 43816835 -42860713 + L3 LINE CR1 1239 1576 -1 258 308 137 20 chr18 43817068 43817214 -42860334 + MIR3 SINE MIR 13 175 -33 787 189 0 0 chr18 43817516 43817659 -42859889 - FLAM_C SINE Alu 0 143 1 1851 151 74 3 chr18 43819188 43819513 -42858035 - MER7A DNA MER2_type 0 346 1 337 284 0 0 chr18 43819893 43819981 -42857567 - L1MC5 LINE L1 -71 7890 7803 842 171 47 39 chr18 43819984 43820201 -42857347 - MER21B LTR ERV1 -199 732 429 * 1262 234 57 88 chr18 43820200 43820654 -42856894 - MER21B LTR ERV1 -326 537 98 2238 91 0 16 chr18 43820939 43821248 -42856300 - AluY SINE Alu -7 304 1 301 315 169 29 chr18 43821418 43821869 -42855679 - L1M4 LINE L1 -1438 4708 4195 273 303 131 56 chr18 43821875 43822265 -42855283 - L1M4 LINE L1 -1999 4147 3729 660 164 36 0 chr18 43823500 43823610 -42853938 - Tigger1 DNA MER2_type 0 2418 2305 473 216 40 23 chr18 43823669 43823845 -42853703 + (TTATG)n Simple_repeat Simple_repeat 1 179 0 12576 153 49 9 chr18 43823858 43824449 -42853099 - Tigger1 DNA MER2_type -149 2269 1703 2028 116 0 0 chr18 43824449 43824726 -42852822 - AluSx SINE Alu -15 297 21 12576 153 49 9 chr18 43824726 43826316 -42851232 - Tigger1 DNA MER2_type -715 1703 2 562 254 32 53 chr18 43827234 43827423 -42850125 - MIR SINE MIR -12 250 66 636 296 104 9 chr18 43827846 43828076 -42849472 + MIR SINE MIR 11 262 0 713 133 9 5 chr18 43828107 43828314 -42849234 + AluSx SINE Alu 4 306 -3 1967 107 45 0 chr18 43828472 43828762 -42848786 - AluSx SINE Alu -9 303 1 526 224 46 17 chr18 43828762 43828936 -42848612 + MER113 DNA MER1_type? 70 248 -273 1646 180 22 35 chr18 43831098 43831409 -42846139 - AluJb SINE Alu -3 309 3 964 256 35 17 chr18 43831972 43832202 -42845346 - MIR SINE MIR 0 262 29 1506 164 27 14 chr18 43832859 43833152 -42844396 - L1MB7 LINE L1 -2 6182 5886 23 0 0 0 chr18 43833797 43833820 -42843728 + AT_rich Low_complexity Low_complexity 1 23 0 25 51 0 0 chr18 43834036 43834075 -42843473 + AT_rich Low_complexity Low_complexity 1 39 0 200 273 61 0 chr18 43835314 43835380 -42842168 + MIR3 SINE MIR 133 202 -6 188 65 0 32 chr18 43835729 43835760 -42841788 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 24 96 0 0 chr18 43835801 43835874 -42841674 + AT_rich Low_complexity Low_complexity 1 73 0 822 251 10 0 chr18 43837573 43837780 -42839768 - MER3 DNA MER1_type 0 209 1 2219 101 0 3 chr18 43837991 43838289 -42839259 - AluY SINE Alu -14 297 1 542 318 100 25 chr18 43838802 43839041 -42838507 + MIR SINE MIR 6 262 0 248 405 0 0 chr18 43839119 43839203 -42838345 - MIR SINE MIR -130 132 49 1986 110 39 0 chr18 43839789 43840070 -42837478 - AluSx SINE Alu -18 294 3 206 0 69 0 chr18 43840236 43840265 -42837283 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1368 204 26 0 chr18 43840267 43840536 -42837012 - AluJo SINE Alu -30 282 7 753 157 7 57 chr18 43841228 43841368 -42836180 + FLAM_A SINE Alu 1 133 0 1336 206 55 0 chr18 43841370 43841642 -42835906 + MER68 LTR ERV1 6 292 -270 225 0 0 0 chr18 43842163 43842188 -42835360 + (TTA)n Simple_repeat Simple_repeat 1 25 0 599 189 0 0 chr18 43842850 43842956 -42834592 + FLAM_C SINE Alu 35 140 -3 2006 101 0 79 chr18 43843960 43844278 -42833270 + AluSx SINE Alu 1 293 -19 42 20 0 0 chr18 43846722 43846771 -42830777 + AT_rich Low_complexity Low_complexity 1 49 0 734 242 96 114 chr18 43847056 43847606 -42829942 + MLT1H1 LTR MaLR 1 555 0 201 281 47 31 chr18 43847669 43847733 -42829815 - L2 LINE L2 -81 3191 3127 369 243 107 35 chr18 43847773 43847942 -42829606 - L1MC4a LINE L1 -1927 5881 5701 253 318 0 35 chr18 43848365 43848450 -42829098 + MIR SINE MIR 3 84 -178 26 50 0 0 chr18 43849889 43849929 -42827619 + AT_rich Low_complexity Low_complexity 1 40 0 29 78 0 0 chr18 43850193 43850257 -42827291 + AT_rich Low_complexity Low_complexity 1 64 0 1284 188 99 11 chr18 43851364 43851646 -42825902 - AluJo SINE Alu -3 309 3 1853 184 12 6 chr18 43851750 43852093 -42825455 + MER7A DNA MER2_type 2 344 -2 22 0 0 0 chr18 43853139 43853161 -42824387 + AT_rich Low_complexity Low_complexity 1 22 0 758 164 7 21 chr18 43853525 43853665 -42823883 + FLAM_C SINE Alu 1 138 -5 22 35 0 0 chr18 43855510 43855539 -42822009 + AT_rich Low_complexity Low_complexity 1 29 0 365 322 141 23 chr18 43855909 43856213 -42821335 + L3 LINE CR1 1199 1538 -39 454 294 142 30 chr18 43856784 43857038 -42820510 + L1M4 LINE L1 4757 4981 -1165 1685 177 7 10 chr18 43857038 43857332 -42820216 + AluJo SINE Alu 1 293 -19 454 294 142 30 chr18 43857332 43857612 -42819936 + L1M4 LINE L1 4981 5351 -795 29 0 0 0 chr18 43857618 43857647 -42819901 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr18 43858827 43858855 -42818693 + AT_rich Low_complexity Low_complexity 1 28 0 227 310 0 0 chr18 43859355 43859426 -42818122 + MIR SINE MIR 186 256 -6 452 265 191 6 chr18 43859909 43860071 -42817477 - MIR SINE MIR 0 262 71 23 0 0 0 chr18 43861314 43861337 -42816211 + AT_rich Low_complexity Low_complexity 1 23 0 262 61 0 0 chr18 43861567 43861600 -42815948 - MADE1 DNA Mariner -45 35 3 21 57 0 0 chr18 43861999 43862034 -42815514 + AT_rich Low_complexity Low_complexity 1 35 0 2020 120 7 0 chr18 43862337 43862629 -42814919 - AluSq SINE Alu -13 300 7 1986 142 73 14 chr18 43862872 43863216 -42814332 - THE1B LTR MaLR 0 364 1 377 277 277 36 chr18 43863496 43863691 -42813857 - MIR SINE MIR 0 262 21 379 343 86 43 chr18 43864712 43865036 -42812512 + L3 LINE CR1 1239 1576 -1 258 308 137 20 chr18 43865269 43865415 -42812133 + MIR3 SINE MIR 13 175 -33 787 189 0 0 chr18 43865717 43865860 -42811688 - FLAM_C SINE Alu 0 143 1 1851 151 74 3 chr18 43867390 43867715 -42809833 - MER7A DNA MER2_type 0 346 1 337 284 0 0 chr18 43868095 43868183 -42809365 - L1MC5 LINE L1 -71 7890 7803 842 171 47 39 chr18 43868186 43868403 -42809145 - MER21B LTR ERV1 -199 732 429 * 1273 236 57 86 chr18 43868402 43868855 -42808693 - MER21B LTR ERV1 -326 537 98 2224 93 0 16 chr18 43869140 43869450 -42808098 - AluY SINE Alu -6 305 1 301 315 169 29 chr18 43869620 43870071 -42807477 - L1M4 LINE L1 -1438 4708 4195 251 305 131 56 chr18 43870077 43870467 -42807081 - L1M4 LINE L1 -1999 4147 3729 660 164 36 0 chr18 43871702 43871812 -42805736 - Tigger1 DNA MER2_type 0 2418 2305 320 227 39 23 chr18 43871871 43871999 -42805549 + (TTATG)n Simple_repeat Simple_repeat 5 134 0 12639 154 47 9 chr18 43872000 43872591 -42804957 - Tigger1 DNA MER2_type -149 2269 1702 2028 116 0 0 chr18 43872591 43872868 -42804680 - AluSx SINE Alu -15 297 21 12639 154 47 9 chr18 43872868 43874460 -42803088 - Tigger1 DNA MER2_type -716 1702 2 562 254 32 53 chr18 43875377 43875566 -42801982 - MIR SINE MIR -12 250 66 636 296 104 9 chr18 43875989 43876219 -42801329 + MIR SINE MIR 11 262 0 713 133 9 5 chr18 43876250 43876457 -42801091 + AluSx SINE Alu 4 306 -3 213 39 0 0 chr18 43876708 43876734 -42800814 + (A)n Simple_repeat Simple_repeat 1 26 0 212 325 201 13 chr18 43876901 43877055 -42800493 - MIR SINE MIR -30 232 50 217 402 0 28 chr18 43877118 43877225 -42800323 - MIR SINE MIR -74 134 31 283 232 141 10 chr18 43877658 43877704 -42799844 + MER103 DNA DNA 8 47 -119 261 0 0 0 chr18 43877704 43877733 -42799815 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 283 232 141 10 chr18 43877733 43877785 -42799763 + MER103 DNA DNA 47 119 -47 198 91 0 0 chr18 43878906 43878939 -42798609 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 414 270 9 27 chr18 43878939 43879050 -42798498 - L2 LINE L2 -14 3299 3191 592 306 24 29 chr18 43879100 43879309 -42798239 - L2 LINE L2 -302 3011 2804 205 250 0 33 chr18 43879346 43879406 -42798142 - L2 LINE L2 -719 2595 2538 610 286 112 50 chr18 43879862 43880426 -42797122 - L1M4 LINE L1 -3405 2741 2143 1690 329 238 14 chr18 43881168 43882780 -42794768 + L2 LINE L2 946 2917 -397 201 278 78 35 chr18 43882854 43882969 -42794579 + L2 LINE L2 3151 3270 -43 187 100 0 0 chr18 43883598 43883628 -42793920 - MIR SINE MIR -120 142 113 1217 186 35 0 chr18 43884206 43884432 -42793116 + MER46A DNA MER2_type 1 234 -2 2503 82 12 0 chr18 43884638 43884979 -42792569 - L1PA6 LINE L1 0 6154 5810 27 29 0 0 chr18 43885553 43885587 -42791961 + AT_rich Low_complexity Low_complexity 1 34 0 2142 122 3 0 chr18 43886937 43887232 -42790316 - AluSp SINE Alu -16 297 2 2400 66 0 28 chr18 43887292 43887610 -42789938 - AluY SINE Alu -2 309 1 370 250 30 91 chr18 43888345 43888477 -42789071 - L2 LINE L2 -2 3311 3188 226 402 62 0 chr18 43888631 43888728 -42788820 + MIR SINE MIR 21 123 -85 345 251 106 39 chr18 43888755 43888934 -42788614 - MER112 DNA MER1_type -2 258 68 1319 199 83 0 chr18 43888958 43889235 -42788313 - AluJo SINE Alu -12 300 1 1341 224 43 9 chr18 43890064 43890148 -42787400 + MER58B DNA MER1_type 4 84 -2336 2113 124 0 3 chr18 43890148 43890454 -42787094 - AluSx SINE Alu -7 305 1 1341 224 43 9 chr18 43890454 43890695 -42786853 + MER58B DNA MER1_type 84 340 -1 295 284 43 57 chr18 43891140 43891281 -42786267 + MIR SINE MIR 54 192 -70 2290 101 7 0 chr18 43892033 43892339 -42785209 - AluSx SINE Alu -4 308 1 728 261 63 22 chr18 43892364 43892586 -42784962 - MIR SINE MIR -28 234 4 337 295 150 35 chr18 43892614 43892787 -42784761 - MIR3 SINE MIR -6 202 10 1642 141 38 38 chr18 43893922 43894213 -42783335 - AluSx SINE Alu -21 291 1 1494 257 40 31 chr18 43894331 43895088 -42782460 - L2 LINE L2 -15 3298 2543 387 0 0 0 chr18 43895121 43895164 -42782384 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 752 201 0 0 chr18 43896710 43896849 -42780699 - FLAM_C SINE Alu -3 140 2 368 261 62 62 chr18 43897435 43897611 -42779937 + MER112 DNA MER1_type 81 256 -4 22 0 0 0 chr18 43897957 43897979 -42779569 + AT_rich Low_complexity Low_complexity 1 22 0 301 338 52 7 chr18 43898746 43898882 -42778666 - L1MC4 LINE L1 -17 8025 7884 203 243 0 0 chr18 43899253 43899290 -42778258 - MIR SINE MIR -60 148 112 2115 163 17 0 chr18 43899304 43899659 -42777889 + MER46B DNA MER2_type 1 236 0 309 369 113 18 chr18 43899764 43899986 -42777562 - MIR SINE MIR 0 262 20 211 173 0 39 chr18 43900831 43900846 -42776702 + (CTTAA)n Simple_repeat Simple_repeat 3 17 -35 2108 112 3 7 chr18 43900846 43901140 -42776408 - AluSx SINE Alu -19 293 1 211 173 0 39 chr18 43901140 43901176 -42776372 + (CTTAA)n Simple_repeat Simple_repeat 17 52 0 204 205 0 0 chr18 43901473 43901512 -42776036 + CT-rich Low_complexity Low_complexity 4 42 0 225 108 0 0 chr18 43901601 43901638 -42775910 + (CA)n Simple_repeat Simple_repeat 2 38 0 318 336 104 43 chr18 43901813 43902194 -42775354 + L2 LINE L2 2625 3029 -243 1442 129 4 18 chr18 43903482 43903707 -42773841 + AluSg/x SINE Alu 86 307 -5 301 259 96 7 chr18 43903748 43903883 -42773665 - L1MC/D LINE L1 -1994 5814 5668 24 32 0 0 chr18 43904039 43904070 -42773478 + AT_rich Low_complexity Low_complexity 1 31 0 401 281 18 18 chr18 43904304 43904418 -42773130 + MIR SINE MIR 1 114 -148 1846 228 69 37 chr18 43904419 43904954 -42772594 + MER68 LTR ERV1 3 554 -8 183 262 49 16 chr18 43904977 43905038 -42772510 + MIR SINE MIR 121 183 -79 430 222 33 46 chr18 43905365 43905561 -42771987 - L1MC/D LINE L1 -731 5431 5238 2194 90 21 0 chr18 43905597 43905887 -42771661 - AluSc SINE Alu -13 296 1 194 0 39 0 chr18 43905947 43905973 -42771575 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1586 181 0 46 chr18 43906889 43907215 -42770333 - AluJb SINE Alu 0 312 2 23 33 0 0 chr18 43907218 43907248 -42770300 + AT_rich Low_complexity Low_complexity 1 30 0 369 248 128 75 chr18 43907908 43908266 -42769282 - MLT1H1 LTR MaLR -171 371 1 461 239 156 60 chr18 43910014 43910181 -42767367 + MER5A DNA MER1_type 1 183 -6 669 300 22 6 chr18 43910184 43910364 -42767184 - MER5A DNA MER1_type -6 183 1 737 244 91 10 chr18 43910372 43910569 -42766979 - MER58A DNA MER1_type 0 224 12 252 229 71 0 chr18 43911118 43911188 -42766360 - MARNA DNA Mariner -117 469 395 2319 83 3 0 chr18 43912188 43912489 -42765059 + AluSp SINE Alu 1 302 -11 300 347 24 83 chr18 43912508 43912845 -42764703 - L3 LINE CR1 0 1577 1261 652 350 57 21 chr18 43912858 43913241 -42764307 + L2 LINE L2 2215 2611 -703 502 298 92 44 chr18 43913308 43913536 -42764012 + L2 LINE L2 2908 3146 -167 337 209 209 11 chr18 43913551 43913642 -42763906 - L2 LINE L2 -5 3308 3200 382 293 45 23 chr18 43913654 43913787 -42763761 + L2 LINE L2 3176 3311 -2 26 0 0 27 chr18 43914350 43914363 -42763185 + AT_rich Low_complexity Low_complexity 1 13 -23 1000 25 0 0 chr18 43914363 43914484 -42763064 + L1PA4 LINE L1 6035 6155 0 26 0 0 27 chr18 43914484 43914507 -42763041 + AT_rich Low_complexity Low_complexity 13 36 0 183 129 0 0 chr18 43914646 43914677 -42762871 + (TG)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr18 43915102 43915123 -42762425 + AT_rich Low_complexity Low_complexity 1 21 0 3286 81 12 0 chr18 43916593 43917023 -42760525 - MLT2A1 LTR ERVL -9 435 1 480 305 105 17 chr18 43917091 43917330 -42760218 + MIR SINE MIR 1 260 -2 1193 199 88 4 chr18 43917470 43917721 -42759827 + MSTB1 LTR MaLR 1 272 -160 23 0 0 0 chr18 43918980 43919003 -42758545 + AT_rich Low_complexity Low_complexity 1 23 0 180 219 329 0 chr18 43921524 43921597 -42755951 - MER5A DNA MER1_type -72 117 21 1699 174 7 26 chr18 43922221 43922525 -42755023 - AluJo SINE Alu -14 298 1 2126 127 0 29 chr18 43922938 43923252 -42754296 + AluSx SINE Alu 1 305 -7 2130 117 3 0 chr18 43923750 43924041 -42753507 + AluSx SINE Alu 1 292 -20 466 285 24 24 chr18 43924379 43924544 -42753004 - MER5B DNA MER1_type -12 166 2 23 0 0 0 chr18 43924688 43924711 -42752837 + AT_rich Low_complexity Low_complexity 1 23 0 1447 114 36 0 chr18 43924791 43925010 -42752538 - MER30 DNA MER1_type -3 227 1 703 296 113 31 chr18 43925036 43925418 -42752130 + L2 LINE L2 2131 2543 -771 531 263 54 67 chr18 43925602 43925842 -42751706 + L2 LINE L2 3077 3313 0 204 40 0 0 chr18 43926184 43926209 -42751339 + (TTA)n Simple_repeat Simple_repeat 3 27 0 891 241 84 57 chr18 43927478 43928004 -42749544 + L1ME LINE L1 444 983 -5087 210 394 67 6 chr18 43928969 43929149 -42748399 + MIR SINE MIR 71 261 -1 2494 76 0 0 chr18 43931119 43931423 -42746125 + AluY SINE Alu 1 304 -7 185 364 39 54 chr18 43931786 43931915 -42745633 - MIR SINE MIR -66 142 15 593 283 25 46 chr18 43932289 43932526 -42745022 - MLT1H1 LTR MaLR -2 553 322 343 244 47 12 chr18 43932653 43932739 -42744809 - MLT1H1 LTR MaLR -401 148 60 220 188 59 0 chr18 43933039 43933091 -42744457 + MIR SINE MIR 87 144 -64 271 233 0 17 chr18 43933822 43933882 -42743666 - MIR SINE MIR -98 164 106 2301 101 0 16 chr18 43933888 43934205 -42743343 + AluSx SINE Alu 1 312 0 1584 173 4 18 chr18 43935008 43935285 -42742263 - AluJo SINE Alu -39 273 1 22 0 0 0 chr18 43936170 43936192 -42741356 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr18 43937750 43937779 -42739769 + AT_rich Low_complexity Low_complexity 1 29 0 399 223 91 25 chr18 43937936 43938057 -42739491 - MIR SINE MIR -16 246 118 233 172 16 0 chr18 43938133 43938197 -42739351 + (TA)n Simple_repeat Simple_repeat 2 66 0 1238 122 66 5 chr18 43938225 43938438 -42739110 - Tigger1 DNA MER2_type -1303 1115 890 641 158 17 8 chr18 43938421 43938541 -42739007 - Tigger1 DNA MER2_type -1425 993 873 * 359 169 0 13 chr18 43938542 43938619 -42738929 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 14100 121 53 14 chr18 43939361 43940444 -42737104 - Tigger1 DNA MER2_type -1 2417 1378 2820 13 0 3 chr18 43940444 43940755 -42736793 + AluYb8 SINE Alu 1 310 -8 14100 121 53 14 chr18 43940755 43941993 -42735555 - Tigger1 DNA MER2_type -1040 1378 4 468 111 0 0 chr18 43942291 43942372 -42735176 + (TG)n Simple_repeat Simple_repeat 1 81 0 232 232 0 18 chr18 43942423 43942479 -42735069 + L2 LINE L2 3246 3300 -13 377 321 119 54 chr18 43942984 43943320 -42734228 - L3 LINE CR1 -374 1203 846 405 259 0 18 chr18 43945059 43945171 -42732377 - MER58B DNA MER1_type 0 341 232 481 330 109 17 chr18 43945962 43946192 -42731356 - MIR SINE MIR 0 262 12 384 165 24 0 chr18 43946838 43946923 -42730625 + L1MC3 LINE L1 7535 7621 -164 206 257 297 0 chr18 43946948 43947049 -42730499 + L3 LINE CR1 1402 1532 -45 286 276 181 8 chr18 43947097 43947224 -42730324 + MER5A DNA MER1_type 38 186 -3 248 226 97 32 chr18 43947744 43947837 -42729711 + MLT1H LTR MaLR 449 547 -2 1845 134 0 38 chr18 43948155 43948275 -42729273 + AluJb SINE Alu 13 136 -176 213 39 0 0 chr18 43948275 43948301 -42729247 + (TG)n Simple_repeat Simple_repeat 1 26 0 1845 134 0 38 chr18 43948301 43948472 -42729076 + AluJb SINE Alu 136 293 -19 497 233 12 74 chr18 43948512 43948675 -42728873 + L2 LINE L2 67 219 -3095 3913 105 58 3 chr18 43948705 43949306 -42728242 + MER41B LTR ERV1 1 634 -1 3401 116 73 58 chr18 43949412 43950015 -42727533 - LTR9 LTR ERV1 0 612 1 818 230 43 21 chr18 43950225 43950513 -42727035 + L1P4 LINE L1 5565 5860 -306 631 203 101 39 chr18 43951004 43951211 -42726337 - LTR45 LTR ERV1 -2 523 304 241 269 118 11 chr18 43951238 43951331 -42726217 - MER72 LTR ERV1 -243 479 377 792 147 42 7 chr18 43953999 43954142 -42723406 - MLT1D LTR MaLR -3 502 355 813 155 0 28 chr18 43954158 43954300 -42723248 - MER4D LTR ERV1 -21 882 745 * 1488 177 34 10 chr18 43954296 43954590 -42722958 - MER4D LTR ERV1 -81 822 522 512 84 0 0 chr18 43954598 43954681 -42722867 - L1PB3 LINE L1 -1 6153 6071 589 210 276 27 chr18 43954681 43954938 -42722610 - MLT1D LTR MaLR -157 348 28 1384 141 4 45 chr18 43956463 43956705 -42720843 + MER46A DNA MER2_type 5 236 0 560 261 68 11 chr18 43956722 43956898 -42720650 + L2 LINE L2 2046 2231 -1083 1548 252 66 18 chr18 43956898 43957291 -42720257 + MER45B DNA AcHobo 1 412 -628 560 342 4 29 chr18 43957852 43958092 -42719456 + MIR SINE MIR 2 235 -27 1142 340 72 41 chr18 43958140 43959217 -42718331 - L2 LINE L2 -2 3311 2196 3629 198 43 55 chr18 43959222 43960690 -42716858 + L1MB8 LINE L1 4656 6091 -87 22 70 0 0 chr18 43960690 43960733 -42716815 + AT_rich Low_complexity Low_complexity 1 43 0 194 300 0 0 chr18 43960801 43960841 -42716707 + L2 LINE L2 3137 3176 -96 21 0 0 0 chr18 43961844 43961865 -42715683 + AT_rich Low_complexity Low_complexity 1 21 0 217 298 77 10 chr18 43962104 43962208 -42715340 - MIR3 SINE MIR -39 169 59 237 273 55 0 chr18 43962312 43962367 -42715181 + MIR3 SINE MIR 126 183 -25 471 242 38 15 chr18 43962874 43963006 -42714542 + MLT1K LTR MaLR 454 588 0 1184 153 30 5 chr18 43963171 43963373 -42714175 - MLT1A1 LTR MaLR 0 365 159 2357 107 0 0 chr18 43964170 43964480 -42713068 + AluSg SINE Alu 1 310 0 245 264 121 11 chr18 43965133 43965224 -42712324 + MIR3 SINE MIR 65 165 -43 1040 239 41 82 chr18 43965348 43965491 -42712057 - MLT2C1 LTR ERVL 0 397 250 2264 109 3 6 chr18 43965491 43965802 -42711746 + AluSg SINE Alu 1 310 0 1040 239 41 82 chr18 43965802 43966072 -42711476 - MLT2C1 LTR ERVL -147 250 1 621 319 161 29 chr18 43966151 43966846 -42710702 + L2 LINE L2 1938 2724 -590 1570 38 113 5 chr18 43966876 43967089 -42710459 + L1PA5 LINE L1 5912 6147 -7 22 35 0 0 chr18 43967089 43967118 -42710430 + AT_rich Low_complexity Low_complexity 1 29 0 664 177 23 0 chr18 43967208 43967338 -42710210 - FLAM_A SINE Alu 0 133 1 368 302 62 47 chr18 43967338 43967596 -42709952 + L2 LINE L2 2927 3188 -125 679 197 8 0 chr18 43969154 43969281 -42708267 + MIR SINE MIR 134 261 -1 228 143 0 0 chr18 43971123 43971165 -42706383 + (TG)n Simple_repeat Simple_repeat 1 42 0 4290 137 40 12 chr18 43971747 43971979 -42705569 - L1MA4 LINE L1 -11 6289 6065 2190 87 0 14 chr18 43971979 43972268 -42705280 - AluSg SINE Alu -22 288 4 4290 137 40 12 chr18 43972268 43972801 -42704747 - L1MA4 LINE L1 -235 6065 5502 431 287 29 7 chr18 43973137 43973273 -42704275 + MIR SINE MIR 8 146 -116 1485 221 23 26 chr18 43973653 43974002 -42703546 - LTR40b LTR ERVL 0 462 115 3906 142 167 20 chr18 43974010 43974996 -42702552 + MER11B LTR ERVK 1 1236 0 679 222 65 0 chr18 43974996 43975147 -42702401 - LTR40a LTR ERVL -352 167 7 2447 127 6 3 chr18 43975260 43975621 -42701927 - THE1B LTR MaLR 0 364 3 246 201 328 45 chr18 43975767 43975901 -42701647 - MIR SINE MIR -10 252 81 208 362 70 9 chr18 43976747 43976887 -42700661 - MIR SINE MIR -66 142 16 4720 147 52 42 chr18 43977640 43977761 -42699787 - L1MC2 LINE L1 -11 6333 6215 2359 135 8 3 chr18 43977761 43978123 -42699425 - THE1B LTR MaLR 0 364 1 4720 147 52 42 chr18 43978123 43979135 -42698413 - L1MC2 LINE L1 -129 6215 5188 296 343 9 0 chr18 43979277 43979382 -42698166 + MIR3 SINE MIR 98 203 -5 995 123 12 53 chr18 43979915 43980086 -42697462 - AluSg/x SINE Alu -15 297 134 2120 136 0 0 chr18 43980086 43980381 -42697167 - AluSx SINE Alu -17 295 1 635 188 26 51 chr18 43981451 43981801 -42695747 - MLT1J1 LTR MaLR 0 446 54 451 214 11 11 chr18 43981855 43981944 -42695604 - MER81 DNA DNA -16 98 10 12688 44 2 1 chr18 43981963 43984306 -42693242 + L1PA5 LINE L1 3813 6146 -8 31 58 0 0 chr18 43984306 43984358 -42693190 + AT_rich Low_complexity Low_complexity 1 52 0 17096 194 44 23 chr18 43984441 43986682 -42690866 - L1PA16 LINE L1 -1 6868 4675 1814 152 122 57 chr18 43986682 43987042 -42690506 + MSTA LTR MaLR 1 391 -37 2118 151 0 0 chr18 43987042 43987347 -42690201 - AluSx SINE Alu -7 305 1 1814 152 122 57 chr18 43987347 43987388 -42690160 + MSTA LTR MaLR 391 428 0 17096 194 44 23 chr18 43987388 43987760 -42689788 - L1PA16 LINE L1 -2194 4675 4312 237 65 0 0 chr18 43987760 43987791 -42689757 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 17096 194 44 23 chr18 43987791 43990179 -42687369 - L1PA16 LINE L1 -2557 4312 1681 1909 148 3 59 chr18 43990179 43990321 -42687227 + MER1B DNA MER1_type 1 149 -2561 2341 65 0 50 chr18 43990321 43990642 -42686906 - AluY SINE Alu -6 305 1 1909 148 3 59 chr18 43990642 43990856 -42686692 + MER1B DNA MER1_type 149 337 0 17096 194 44 23 chr18 43990856 43992572 -42684976 - L1PA16 LINE L1 -5188 1681 2 245 294 92 17 chr18 43992644 43992763 -42684785 - MIR3 SINE MIR -10 198 71 1309 183 10 112 chr18 43992764 43993157 -42684391 + MLT1A1 LTR MaLR 1 353 -12 261 265 29 0 chr18 43993421 43993489 -42684059 - L2 LINE L2 -3 3269 3200 608 276 72 56 chr18 43995263 43995654 -42681894 - LTR37B LTR ERV1 -64 404 8 207 298 30 15 chr18 43996155 43996286 -42681262 + A-rich Low_complexity Low_complexity 1 133 0 1205 108 32 11 chr18 43996380 43996565 -42680983 + L1MC/D LINE L1 5432 5620 -713 364 239 74 61 chr18 43996601 43996815 -42680733 - MLT1A1 LTR MaLR -137 228 1 1235 130 19 5 chr18 43996815 43997023 -42680525 + L1MC1 LINE L1 5614 5824 -509 6122 189 20 2 chr18 43997023 43999131 -42678417 + L1PA13 LINE L1 4023 6160 -3 2593 157 39 18 chr18 43999131 43999409 -42678139 + L1MC1 LINE L1 5813 6107 -226 1254 220 97 78 chr18 43999409 43999937 -42677611 + MER34 LTR ERV1 1 538 -4 2593 157 39 18 chr18 43999937 44000150 -42677398 + L1MC1 LINE L1 6107 6314 -19 489 68 0 27 chr18 44000649 44000723 -42676825 + L1PA10 LINE L1 6093 6164 -4 28 48 0 0 chr18 44001571 44001613 -42675935 + AT_rich Low_complexity Low_complexity 1 42 0 2368 89 3 3 chr18 44001974 44002276 -42675272 + AluSc SINE Alu 1 302 -7 2934 190 55 2 chr18 44002351 44002968 -42674580 - L1MB5 LINE L1 -14 6160 5511 2369 85 0 0 chr18 44003277 44003572 -42673976 - AluY SINE Alu -16 295 1 476 275 133 34 chr18 44003676 44004142 -42673406 + HAL1 LINE L1 1701 2212 -295 663 266 87 60 chr18 44004247 44004688 -42672860 - MLT1G1 LTR MaLR 0 555 1 207 100 0 0 chr18 44004899 44004929 -42672619 + (A)n Simple_repeat Simple_repeat 1 30 0 250 264 121 11 chr18 44005577 44005668 -42671880 + MIR3 SINE MIR 65 165 -43 1010 239 41 82 chr18 44005792 44005935 -42671613 - MLT2C1 LTR ERVL 0 397 250 2295 109 3 6 chr18 44005935 44006246 -42671302 + AluSg SINE Alu 1 310 0 1010 239 41 82 chr18 44006246 44006516 -42671032 - MLT2C1 LTR ERVL -147 250 1 768 323 159 21 chr18 44006595 44007300 -42670248 + L2 LINE L2 1938 2739 -575 1680 19 113 0 chr18 44007316 44007528 -42670020 + L1PA5 LINE L1 5912 6147 -7 22 35 0 0 chr18 44007528 44007557 -42669991 + AT_rich Low_complexity Low_complexity 1 29 0 673 177 23 0 chr18 44007648 44007778 -42669770 - FLAM_A SINE Alu 0 133 1 371 302 62 47 chr18 44007778 44008036 -42669512 + L2 LINE L2 2927 3188 -125 674 197 8 0 chr18 44009594 44009721 -42667827 + MIR SINE MIR 134 261 -1 228 143 0 0 chr18 44011563 44011605 -42665943 + (TG)n Simple_repeat Simple_repeat 1 42 0 4237 136 43 11 chr18 44012187 44012419 -42665129 - L1MA4 LINE L1 -11 6289 6066 2169 92 0 14 chr18 44012419 44012711 -42664837 - AluSg SINE Alu -22 288 1 4237 136 43 11 chr18 44012711 44013241 -42664307 - L1MA4 LINE L1 -234 6066 5502 431 287 29 7 chr18 44013577 44013713 -42663835 + MIR SINE MIR 8 146 -116 1485 221 23 26 chr18 44014093 44014442 -42663106 - LTR40b LTR ERVL 0 462 115 3906 142 167 20 chr18 44014450 44015436 -42662112 + MER11B LTR ERVK 1 1236 0 679 222 65 0 chr18 44015436 44015587 -42661961 - LTR40a LTR ERVL -352 167 7 2447 127 6 3 chr18 44015700 44016061 -42661487 - THE1B LTR MaLR 0 364 3 246 201 328 45 chr18 44016207 44016341 -42661207 - MIR SINE MIR -10 252 81 208 362 70 9 chr18 44017187 44017327 -42660221 - MIR SINE MIR -66 142 16 4719 148 52 42 chr18 44018080 44018201 -42659347 - L1MC2 LINE L1 -11 6333 6215 2359 135 8 3 chr18 44018201 44018563 -42658985 - THE1B LTR MaLR 0 364 1 4719 148 52 42 chr18 44018563 44019575 -42657973 - L1MC2 LINE L1 -129 6215 5188 296 343 9 0 chr18 44019717 44019822 -42657726 + MIR3 SINE MIR 98 203 -5 1731 121 10 49 chr18 44020355 44020660 -42656888 - AluSg SINE Alu -17 293 1 1980 144 43 0 chr18 44021059 44021395 -42656153 + AluSx SINE Alu 1 349 0 464 368 62 24 chr18 44021722 44022187 -42655361 - L1MEc LINE L1 -4579 1817 1335 1158 204 82 11 chr18 44022188 44022541 -42655007 - L1MEc LINE L1 -2989 3226 2849 811 240 73 28 chr18 44022533 44022958 -42654590 - L1MEc LINE L1 -4942 1454 1011 * 3605 200 89 56 chr18 44023021 44023179 -42654369 - L1MDa LINE L1 -4014 2526 2375 1826 169 3 23 chr18 44023179 44023481 -42654067 - AluJo SINE Alu -12 300 5 3605 200 89 56 chr18 44023481 44024790 -42652758 - L1MDa LINE L1 -4165 2375 1011 291 315 16 75 chr18 44025007 44025261 -42652287 - L1MDa LINE L1 -5981 559 321 403 233 140 13 chr18 44025262 44025412 -42652136 - L1MDa LINE L1 -6294 246 78 405 240 129 0 chr18 44025413 44025584 -42651964 - L1MEc LINE L1 -5452 944 752 3690 88 58 0 chr18 44025625 44026156 -42651392 - L1PA10 LINE L1 -8 6160 5599 8861 120 21 3 chr18 44026156 44027898 -42649650 + L1PA10 LINE L1 3854 5622 -546 1997 260 67 29 chr18 44027917 44028618 -42648930 - L1MEc LINE L1 -5633 763 36 275 255 75 53 chr18 44029045 44029139 -42648409 - MIR3 SINE MIR -3 205 110 225 83 0 0 chr18 44030056 44030092 -42647456 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 24 0 0 0 chr18 44030644 44030668 -42646880 + GC_rich Low_complexity Low_complexity 1 24 0 216 0 0 0 chr18 44030689 44030713 -42646835 + (A)n Simple_repeat Simple_repeat 1 24 0 371 20 0 20 chr18 44032200 44032249 -42645299 + (TC)n Simple_repeat Simple_repeat 1 48 0 243 0 0 0 chr18 44032248 44032275 -42645273 + (CA)n Simple_repeat Simple_repeat 1 27 0 * 388 303 18 9 chr18 44032349 44032458 -42645090 + L2 LINE L2 3160 3269 -3 199 354 73 10 chr18 44032459 44032555 -42644993 - MIR3 SINE MIR -49 159 58 352 339 77 8 chr18 44033535 44033665 -42643883 + MIR3 SINE MIR 21 159 -49 512 304 17 39 chr18 44033666 44033847 -42643701 - MER5B DNA MER1_type 0 178 2 239 234 0 0 chr18 44033847 44033878 -42643670 + MIR3 SINE MIR 168 198 -10 1285 264 36 36 chr18 44034266 44034716 -42642832 + LTR16B LTR ERVL 9 458 -6 23 33 0 0 chr18 44035130 44035160 -42642388 + AT_rich Low_complexity Low_complexity 1 30 0 243 195 49 0 chr18 44035196 44035278 -42642270 + (TA)n Simple_repeat Simple_repeat 1 86 0 233 381 32 32 chr18 44036638 44036764 -42640784 + MIR3 SINE MIR 9 134 -74 453 345 25 20 chr18 44037325 44037528 -42640020 - MIR3 SINE MIR 0 208 5 251 254 51 109 chr18 44039460 44039598 -42637950 + L3 LINE CR1 1363 1492 -85 5854 127 28 3 chr18 44039663 44040596 -42636952 - HSMAR2 DNA Mariner -3 1299 344 314 259 12 25 chr18 44040600 44040681 -42636867 - MIR SINE MIR -177 85 6 464 261 0 9 chr18 44040740 44040855 -42636693 - Charlie8 DNA MER1_type -2150 267 154 252 86 0 0 chr18 44041063 44041098 -42636450 + (CA)n Simple_repeat Simple_repeat 2 36 0 355 303 136 0 chr18 44041276 44041431 -42636117 + MLT1H1 LTR MaLR 1 176 -379 408 270 82 40 chr18 44041449 44041712 -42635836 + MLT1H1 LTR MaLR 320 555 0 23 0 0 0 chr18 44044459 44044482 -42633066 + AT_rich Low_complexity Low_complexity 1 23 0 30 0 0 0 chr18 44044504 44044534 -42633014 + AT_rich Low_complexity Low_complexity 1 30 0 183 280 144 42 chr18 44045932 44045978 -42631570 + MIR SINE MIR 118 158 -104 1673 201 47 59 chr18 44045978 44046450 -42631098 - MLT1C LTR MaLR -1 466 1 183 280 144 42 chr18 44046450 44046521 -42631027 + MIR SINE MIR 158 247 -15 283 286 13 0 chr18 44049181 44049258 -42628290 - MER63 DNA MER1_type 0 1060 983 * 418 282 48 0 chr18 44049256 44049380 -42628168 - MER63 DNA MER1_type -302 760 5 183 129 0 0 chr18 44049440 44049471 -42628077 + (T)n Simple_repeat Simple_repeat 1 31 0 1907 166 0 0 chr18 44049629 44049925 -42627623 + AluSq SINE Alu 1 296 -17 1070 270 14 31 chr18 44049925 44050106 -42627442 + L1MC4a LINE L1 5596 5770 -2038 2175 137 22 25 chr18 44050106 44050471 -42627077 - THE1B LTR MaLR 0 364 1 1070 270 14 31 chr18 44050471 44050645 -42626903 + L1MC4a LINE L1 5770 5945 -1863 191 339 18 0 chr18 44051165 44051221 -42626327 - L2 LINE L2 -30 3242 3186 1958 154 50 24 chr18 44051269 44051645 -42625903 + MLT1B LTR MaLR 3 388 -2 580 296 29 6 chr18 44051747 44051919 -42625629 - MIR SINE MIR -86 176 1 1911 235 80 2 chr18 44052166 44052681 -42624867 - L1ME3A LINE L1 -40 6130 5576 301 282 83 32 chr18 44052725 44052881 -42624667 + L1M4 LINE L1 4330 4493 -1653 12701 174 21 22 chr18 44054562 44054907 -42622641 - L1PA13 LINE L1 0 6814 6470 1959 176 0 3 chr18 44054907 44055214 -42622334 - AluSx SINE Alu -6 306 1 12701 174 21 22 chr18 44055214 44058344 -42619204 - L1PA13 LINE L1 -344 6470 3330 2039 168 39 36 chr18 44058344 44058894 -42618654 - MLT2A2 LTR ERVL -1 553 1 9950 239 30 21 chr18 44058894 44060144 -42617404 - L1PA13 LINE L1 -3462 3335 2098 2097 127 37 10 chr18 44060144 44060443 -42617105 - AluSx SINE Alu -5 307 1 9950 239 30 21 chr18 44060443 44062447 -42615101 - L1PA13 LINE L1 -4699 2098 1 211 245 0 0 chr18 44062842 44062891 -42614657 - L2 LINE L2 0 3313 3265 258 341 149 32 chr18 44063075 44063418 -42614130 - L2 LINE L2 -494 2820 2438 229 346 8 55 chr18 44064097 44064116 -42613432 + L2 LINE L2 3152 3170 -102 2216 121 134 8 chr18 44064116 44064496 -42613052 + MSTA LTR MaLR 1 428 0 229 346 8 55 chr18 44064496 44064603 -42612945 + L2 LINE L2 3170 3272 0 1523 185 39 36 chr18 44064926 44065234 -42612314 + AluJb SINE Alu 1 309 -3 356 289 71 37 chr18 44065254 44065634 -42611914 - L1ME4a LINE L1 -34 6087 5695 911 201 81 79 chr18 44065669 44066112 -42611436 - LTR37B LTR ERV1 -19 449 6 241 219 0 0 chr18 44066309 44066350 -42611198 + L2 LINE L2 3146 3186 -86 27 0 0 0 chr18 44069497 44069524 -42608024 + AT_rich Low_complexity Low_complexity 1 27 0 886 216 7 0 chr18 44069536 44069689 -42607859 - FRAM SINE Alu -12 154 1 273 305 0 0 chr18 44070486 44070545 -42607003 + L2 LINE L2 3144 3202 -70 7072 17 6 0 chr18 44070761 44071621 -42605927 - L1PA3 LINE L1 -1 6154 5290 356 93 0 0 chr18 44073617 44073671 -42603877 + Alu SINE Alu 247 300 0 523 299 189 28 chr18 44073811 44074102 -42603446 + L3 LINE CR1 1149 1486 -91 1893 100 4 12 chr18 44074737 44074996 -42602552 + AluSc SINE Alu 1 257 -52 2390 88 6 23 chr18 44075006 44075360 -42602188 + L1PB2 LINE L1 5802 6149 -2 487 222 0 0 chr18 44075678 44075768 -42601780 + 5S rRNA rRNA 1 90 -31 810 345 34 16 chr18 44077761 44078202 -42599346 + LTR16A LTR ERVL 1 449 -1 3114 98 28 0 chr18 44078709 44079098 -42598450 + MLT2A1 LTR ERVL 3 407 -37 186 43 0 0 chr18 44079098 44079121 -42598427 + (TA)n Simple_repeat Simple_repeat 2 24 0 3114 98 28 0 chr18 44079121 44079161 -42598387 + MLT2A1 LTR ERVL 407 444 0 517 260 193 0 chr18 44079970 44080120 -42597428 - MER5A DNA MER1_type 0 189 11 282 116 0 0 chr18 44081195 44081238 -42596310 + (CA)n Simple_repeat Simple_repeat 2 44 0 530 94 24 0 chr18 44081298 44081383 -42596165 + (TTCC)n Simple_repeat Simple_repeat 4 90 0 229 37 0 0 chr18 44081383 44081410 -42596138 + (TC)n Simple_repeat Simple_repeat 1 27 0 746 213 6 25 chr18 44081411 44081571 -42595977 - FRAM SINE Alu -20 156 1 22 56 0 0 chr18 44082649 44082685 -42594863 + AT_rich Low_complexity Low_complexity 1 36 0 238 274 45 76 chr18 44082859 44083016 -42594532 + MIR SINE MIR 15 166 -96 2310 77 0 10 chr18 44083118 44083416 -42594132 + AluY SINE Alu 1 295 -16 291 255 57 19 chr18 44083767 44083873 -42593675 + MIR SINE MIR 141 250 -12 250 327 20 20 chr18 44084052 44084153 -42593395 + L2 LINE L2 3160 3260 -12 21 0 0 0 chr18 44084239 44084260 -42593288 + AT_rich Low_complexity Low_complexity 1 21 0 1390 186 72 31 chr18 44084289 44084638 -42592910 + MLT1A1 LTR MaLR 1 363 -2 207 100 0 0 chr18 44084878 44084908 -42592640 + (A)n Simple_repeat Simple_repeat 1 30 0 29 28 0 0 chr18 44085016 44085052 -42592496 + AT_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr18 44085372 44085395 -42592153 + AT_rich Low_complexity Low_complexity 1 23 0 457 269 27 13 chr18 44085662 44085811 -42591737 + MLT1I LTR MaLR 102 252 -157 293 276 11 11 chr18 44086668 44086755 -42590793 - MLT1K LTR MaLR -2 586 500 499 262 0 0 chr18 44086922 44087029 -42590519 - MER81 DNA DNA -4 110 4 293 276 130 8 chr18 44087313 44087436 -42590112 - MIR SINE MIR -6 256 119 285 298 14 26 chr18 44088349 44088488 -42589060 + MIR SINE MIR 68 201 -7 796 300 42 12 chr18 44089128 44089502 -42588046 - MER115 DNA AcHobo -4 689 264 2258 102 3 0 chr18 44089987 44090282 -42587266 + AluSx SINE Alu 10 305 -7 21 0 0 0 chr18 44090376 44090397 -42587151 + AT_rich Low_complexity Low_complexity 1 21 0 221 309 64 36 chr18 44091056 44091166 -42586382 + MIR SINE MIR 34 146 -62 323 296 33 115 chr18 44091260 44091625 -42585923 - L2 LINE L2 -86 3186 2852 2078 135 3 0 chr18 44091870 44092167 -42585381 - AluSx SINE Alu -14 298 1 311 293 72 17 chr18 44092212 44092351 -42585197 - MIR SINE MIR -64 144 40 955 210 0 76 chr18 44092390 44092628 -42584920 - MER58A DNA MER1_type -4 220 1 188 363 53 39 chr18 44093355 44093636 -42583912 + L2 LINE L2 2569 2853 -461 447 68 0 0 chr18 44093872 44093931 -42583617 + (CA)n Simple_repeat Simple_repeat 1 59 0 2382 72 6 31 chr18 44094115 44094434 -42583114 + AluY SINE Alu 1 311 0 290 188 125 43 chr18 44096057 44096153 -42581395 - MIR SINE MIR -62 146 49 192 239 94 80 chr18 44096201 44096339 -42581209 + MIR3 SINE MIR 43 182 -26 272 255 92 31 chr18 44096600 44096698 -42580850 - L2 LINE L2 -1 3312 3209 351 391 22 7 chr18 44096825 44096963 -42580585 + MIR SINE MIR 28 167 -95 2411 205 79 5 chr18 44097685 44098291 -42579257 + L1MB7 LINE L1 5521 6171 -13 2109 141 0 10 chr18 44100880 44101186 -42576362 - AluSx SINE Alu -5 307 5 389 289 89 15 chr18 44101237 44101372 -42576176 - MIR3 SINE MIR -14 194 50 275 246 36 73 chr18 44101838 44101948 -42575600 - MIR SINE MIR 0 262 157 251 286 71 12 chr18 44102361 44102445 -42575103 + MIR SINE MIR 39 127 -81 498 225 33 0 chr18 44103449 44103569 -42573979 + FLAM_A SINE Alu 7 130 -12 355 272 0 29 chr18 44104926 44105029 -42572519 + MER5B DNA MER1_type 79 178 0 547 192 59 128 chr18 44105036 44105106 -42572442 + MER5A DNA MER1_type 1 74 -115 2107 112 0 0 chr18 44105106 44105393 -42572155 - AluSx SINE Alu -25 287 1 547 192 59 128 chr18 44105393 44105525 -42572023 + MER5A DNA MER1_type 74 189 0 246 277 12 0 chr18 44105780 44105863 -42571685 + MLT1I LTR MaLR 326 409 0 1201 202 12 4 chr18 44107266 44107514 -42570034 + MER88 LTR ERVL 215 464 0 785 168 39 61 chr18 44107520 44107817 -42569731 - MLT1A1 LTR MaLR -10 355 8 186 71 0 0 chr18 44108570 44108598 -42568950 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 417 330 53 27 chr18 44108789 44108977 -42568571 - MIR3 SINE MIR -8 200 8 301 304 9 54 chr18 44108975 44109087 -42568461 + MIR3 SINE MIR 55 161 -47 * 1397 112 16 0 chr18 44110464 44110652 -42566896 + AluSg/x SINE Alu 113 303 -9 2375 134 5 27 chr18 44113750 44114122 -42563426 - THE1B LTR MaLR 0 364 1 347 268 41 16 chr18 44115271 44115394 -42562154 - MLT1I LTR MaLR -199 210 85 409 206 245 16 chr18 44117707 44117891 -42559657 - MER2 DNA MER2_type -1 344 119 246 258 15 0 chr18 44117880 44117946 -42559602 - MER8 DNA MER2_type -172 67 1 * 2063 131 76 17 chr18 44118086 44118430 -42559118 - THE1B LTR MaLR 0 364 1 749 220 78 11 chr18 44118841 44119032 -42558516 - MER3 DNA MER1_type 0 209 6 200 300 77 39 chr18 44119235 44119365 -42558183 - MIR SINE MIR -15 247 113 303 28 0 0 chr18 44119430 44119466 -42558082 + (CA)n Simple_repeat Simple_repeat 1 36 0 228 143 0 0 chr18 44119725 44119767 -42557781 + (A)n Simple_repeat Simple_repeat 1 42 0 481 355 20 10 chr18 44120117 44120314 -42557234 + MIR SINE MIR 29 227 -35 382 342 174 25 chr18 44120350 44120713 -42556835 - L3 LINE CR1 -187 1390 974 892 236 43 71 chr18 44120725 44121047 -42556501 + L1MDa LINE L1 14 326 -6214 6332 221 62 20 chr18 44121049 44123051 -42554497 + L1MDa LINE L1 635 2717 -3823 2751 265 70 12 chr18 44123054 44124333 -42553215 + L1MDa LINE L1 2812 4164 -2376 4251 110 22 49 chr18 44125973 44126683 -42550865 + LTR8 LTR ERV1 1 691 0 21 0 0 0 chr18 44126692 44126713 -42550835 + AT_rich Low_complexity Low_complexity 1 21 0 1301 213 14 17 chr18 44126812 44127108 -42550440 + AluJo SINE Alu 1 295 -17 796 193 68 6 chr18 44127108 44127294 -42550254 + AluJo/FRAM SINE Alu 134 329 0 1565 191 10 13 chr18 44128032 44128335 -42549213 - AluSx SINE Alu -4 308 7 196 337 137 21 chr18 44128444 44128539 -42549009 - MIR SINE MIR -75 133 28 1733 156 73 0 chr18 44129172 44129460 -42548088 + AluJb SINE Alu 3 311 -1 414 309 112 5 chr18 44129641 44129856 -42547692 - L1MC/D LINE L1 -423 5698 5479 1583 140 54 54 chr18 44130174 44130525 -42547023 + MER4B LTR ERV1 1 351 -259 838 135 0 8 chr18 44130525 44130651 -42546897 - AluSg/x SINE Alu -12 298 174 1253 164 18 62 chr18 44130651 44130925 -42546623 + MER4B LTR ERV1 349 610 0 4022 142 10 60 chr18 44131249 44131977 -42545571 - LTR8 LTR ERV1 0 691 1 763 223 25 6 chr18 44132974 44133131 -42544417 + MER5B DNA MER1_type 19 178 0 2300 158 41 17 chr18 44133584 44134002 -42543546 + MSTA LTR MaLR 1 428 0 200 250 67 17 chr18 44134002 44134062 -42543486 + L2 LINE L2 3251 3313 0 899 241 46 9 chr18 44134240 44134456 -42543092 + MER58A DNA MER1_type 1 224 0 1708 159 61 73 chr18 44135586 44135856 -42541692 - LTR56 LTR ERV1 -1 444 179 2514 99 21 16 chr18 44135856 44136241 -42541307 + L1PB2 LINE L1 5763 6149 -2 1708 159 61 73 chr18 44136241 44136410 -42541138 - LTR56 LTR ERV1 -266 179 10 502 127 0 0 chr18 44136586 44136665 -42540883 - MADE1 DNA Mariner -1 79 1 3533 115 47 7 chr18 44137247 44137819 -42539729 + LTR49 LTR ERV1 1 595 0 40 67 0 0 chr18 44138455 44138530 -42539018 + AT_rich Low_complexity Low_complexity 1 75 0 399 21 0 0 chr18 44139237 44139285 -42538263 + (TC)n Simple_repeat Simple_repeat 1 48 0 28 0 0 0 chr18 44139408 44139436 -42538112 + AT_rich Low_complexity Low_complexity 1 28 0 1670 259 84 29 chr18 44139511 44140071 -42537477 + MLT1E LTR MaLR 3 593 0 259 246 0 0 chr18 44140205 44140274 -42537274 + T-rich Low_complexity Low_complexity 1 69 0 25 31 0 0 chr18 44140303 44140335 -42537213 + AT_rich Low_complexity Low_complexity 1 32 0 290 377 18 0 chr18 44140890 44141004 -42536544 - MIR SINE MIR -77 131 16 891 356 42 37 chr18 44142371 44142939 -42534609 - L3 LINE CR1 -156 1421 851 271 341 12 0 chr18 44143313 44143395 -42534153 - L3 LINE CR1 -1273 304 222 195 243 108 14 chr18 44144147 44144221 -42533327 - L2 LINE L2 -1 3271 3191 503 282 102 14 chr18 44144282 44144498 -42533050 + MARNA DNA Mariner 86 320 -266 1662 217 100 34 chr18 44144595 44144638 -42532910 + MLT1D LTR MaLR 1 40 -465 1856 176 0 0 chr18 44144638 44144940 -42532608 + AluSx SINE Alu 1 302 -10 1662 217 100 34 chr18 44144940 44145366 -42532182 + MLT1D LTR MaLR 40 501 -4 738 212 0 0 chr18 44145392 44145524 -42532024 + AluJo SINE Alu 1 132 -170 2220 119 3 3 chr18 44145602 44145913 -42531635 - AluSq SINE Alu -2 311 1 256 331 40 8 chr18 44145947 44146071 -42531477 + MER117 DNA MER1_type 27 154 -43 197 378 14 0 chr18 44146796 44146870 -42530678 - L2 LINE L2 -43 3229 3155 557 329 41 21 chr18 44147094 44147337 -42530211 + MIR SINE MIR 3 250 -12 360 279 158 12 chr18 44147712 44147952 -42529596 + MLT1L LTR MaLR 323 597 -18 2129 138 0 3 chr18 44148414 44148718 -42528830 + AluSx SINE Alu 3 305 -7 344 82 0 0 chr18 44149354 44149403 -42528145 + (TG)n Simple_repeat Simple_repeat 2 50 0 627 288 82 29 chr18 44150692 44151387 -42526161 + L1ME3A LINE L1 3115 3846 -2300 827 193 7 0 chr18 44151393 44151538 -42526010 + AluJo SINE Alu 142 287 -25 318 282 109 23 chr18 44151548 44151831 -42525717 + L1ME3A LINE L1 3846 4166 -1980 803 314 87 28 chr18 44151850 44152308 -42525240 + LTR16C LTR ERVL 1 485 -6 252 309 40 7 chr18 44152312 44152461 -42525087 + L1ME3A LINE L1 4179 4332 -1814 1023 267 17 8 chr18 44152622 44152982 -42524566 + L1ME3A LINE L1 4614 4976 -1170 1146 256 73 59 chr18 44153166 44153242 -42524306 + L1ME3A LINE L1 5207 5280 -890 2338 112 0 3 chr18 44153242 44153554 -42523994 + AluSq SINE Alu 1 311 -2 1146 256 73 59 chr18 44153554 44154314 -42523234 + L1ME3A LINE L1 5280 6060 -110 222 267 0 0 chr18 44154357 44154402 -42523146 + MER5C DNA MER1_type 7 51 -273 3472 134 18 62 chr18 44154417 44154671 -42522877 + MER39B LTR ERV1 3 267 -386 4109 61 6 4 chr18 44154671 44155199 -42522349 + L1PA6 LINE L1 5626 6154 0 3472 134 18 62 chr18 44155199 44155625 -42521923 + MER39B LTR ERV1 267 653 0 539 238 83 11 chr18 44156185 44156366 -42521182 + MER5C DNA MER1_type 56 249 -75 378 157 120 28 chr18 44156396 44156504 -42521044 + MER5C DNA MER1_type 206 323 -1 312 360 123 43 chr18 44156684 44156895 -42520653 + L2 LINE L2 3045 3272 0 2324 156 166 168 chr18 44158036 44159057 -42518491 - LTR28 LTR ERV1 0 1020 1 2233 111 3 0 chr18 44159366 44159663 -42517885 + AluSp SINE Alu 1 298 -15 993 46 54 0 chr18 44160014 44160144 -42517404 + L1PA5 LINE L1 6005 6141 -13 22 35 0 0 chr18 44160144 44160173 -42517375 + AT_rich Low_complexity Low_complexity 1 29 0 377 312 21 4 chr18 44160400 44160573 -42516975 + MIR SINE MIR 75 250 -12 2256 160 30 5 chr18 44161037 44161430 -42516118 + MER57A LTR ERV1 1 403 0 285 138 108 15 chr18 44161751 44161816 -42515732 + L1 LINE L1 3857 3927 -2219 4034 144 21 7 chr18 44162285 44162985 -42514563 - MER67C LTR ERV1 0 710 1 231 88 0 0 chr18 44163366 44163400 -42514148 + (T)n Simple_repeat Simple_repeat 1 34 0 2790 192 91 26 chr18 44164429 44165164 -42512384 - LTR48 LTR ERV1 -2 785 3 393 22 0 0 chr18 44165422 44165468 -42512080 + (TA)n Simple_repeat Simple_repeat 2 47 0 2073 196 93 42 chr18 44166057 44166670 -42510878 + LTR48B LTR ERV1 1 644 0 198 0 0 0 chr18 44166887 44166909 -42510639 + (A)n Simple_repeat Simple_repeat 1 22 0 1740 196 10 0 chr18 44167180 44167481 -42510067 + AluJb SINE Alu 1 304 -8 216 301 135 45 chr18 44167481 44167637 -42509911 + MIR SINE MIR 59 228 -34 1582 173 75 31 chr18 44169152 44169511 -42508037 + THE1C LTR MaLR 1 375 0 9091 138 20 42 chr18 44169514 44171126 -42506422 + THE1C-int LTR MaLR 4 1580 0 1766 160 58 22 chr18 44171126 44171488 -42506060 + THE1C LTR MaLR 1 375 0 225 94 0 0 chr18 44172351 44172383 -42505165 + (GAAAA)n Simple_repeat Simple_repeat 4 35 0 192 182 0 0 chr18 44172600 44172644 -42504904 + (CATA)n Simple_repeat Simple_repeat 4 47 0 421 280 53 13 chr18 44172982 44173132 -42504416 - MIR SINE MIR -58 204 49 208 182 109 0 chr18 44173722 44173777 -42503771 + MIR SINE MIR 84 144 -118 2131 126 13 3 chr18 44173785 44174087 -42503461 + AluSg SINE Alu 1 305 -5 2981 127 5 5 chr18 44175453 44175894 -42501654 - MER41E LTR ERV1 -18 494 54 1255 193 14 5 chr18 44175894 44176117 -42501431 - AluJb SINE Alu -78 234 10 289 350 30 10 chr18 44176433 44176533 -42501015 - MIR SINE MIR -153 109 8 461 315 27 0 chr18 44177580 44177726 -42499822 + MIR3 SINE MIR 23 172 -36 926 282 33 66 chr18 44177783 44178205 -42499343 - L2 LINE L2 -8 3305 2898 24 32 0 0 chr18 44178999 44179030 -42498518 + AT_rich Low_complexity Low_complexity 1 31 0 1763 138 10 27 chr18 44179413 44179711 -42497837 - MER4A LTR ERV1 0 664 372 576 84 53 21 chr18 44179753 44179848 -42497700 - MER4A LTR ERV1 -566 98 1 1246 126 10 34 chr18 44179974 44180180 -42497368 + THE1B LTR MaLR 164 364 0 985 275 39 42 chr18 44180180 44180361 -42497187 - L1MC/D LINE L1 -2030 5778 5597 2259 112 0 0 chr18 44180361 44180657 -42496891 - AluSq SINE Alu -17 296 1 985 275 39 42 chr18 44180657 44180810 -42496738 - L1MC/D LINE L1 -2211 5597 5445 304 253 13 40 chr18 44181344 44181419 -42496129 + MIR3 SINE MIR 99 171 -37 22 0 0 0 chr18 44181736 44181758 -42495790 + AT_rich Low_complexity Low_complexity 1 22 0 182 254 109 0 chr18 44181772 44181827 -42495721 - L2 LINE L2 -19 3294 3234 714 147 0 56 chr18 44182861 44183004 -42494544 - AluJo SINE Alu 0 312 178 525 246 0 0 chr18 44182993 44183107 -42494441 - AluJo SINE Alu -198 114 1 * 220 301 121 8 chr18 44183201 44183325 -42494223 - MIR3 SINE MIR -114 148 1 344 260 42 10 chr18 44183441 44183537 -42494011 - MIR3 SINE MIR -21 187 89 2193 130 0 6 chr18 44183728 44184043 -42493505 - AluSq SINE Alu 0 313 1 222 225 67 56 chr18 44185121 44185210 -42492338 + L2 LINE L2 2716 2805 -509 600 288 66 39 chr18 44185386 44185631 -42491917 + MIR SINE MIR 13 260 -2 2179 98 0 3 chr18 44185813 44186099 -42491449 - AluSc SINE Alu -24 285 1 233 29 0 29 chr18 44186102 44186137 -42491411 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 351 308 145 0 chr18 44186139 44186256 -42491292 + L2 LINE L2 3132 3265 -7 257 336 99 30 chr18 44186286 44186417 -42491131 + MIR3 SINE MIR 15 154 -54 2354 185 48 0 chr18 44186527 44186987 -42490561 + L1PB4 LINE L1 5669 6150 -6 212 292 0 0 chr18 44187056 44187104 -42490444 + MIR SINE MIR 212 259 -3 538 247 137 50 chr18 44187115 44187516 -42490032 - L1ME4a LINE L1 -288 5833 5398 25 31 0 0 chr18 44187516 44187548 -42490000 + AT_rich Low_complexity Low_complexity 1 32 0 187 337 74 61 chr18 44188877 44189040 -42488508 + MIR SINE MIR 38 202 -6 243 338 88 79 chr18 44189641 44189881 -42487667 + L2 LINE L2 3029 3270 -2 5297 133 24 37 chr18 44190022 44191308 -42486240 - L1PB1 LINE L1 -72 6079 4793 347 281 138 24 chr18 44191769 44191936 -42485612 - MIR SINE MIR -29 233 48 284 248 229 0 chr18 44191943 44192052 -42485496 - MER94 DNA DNA 0 134 1 521 301 88 31 chr18 44192539 44192765 -42484783 + MIR SINE MIR 23 261 -1 433 221 63 16 chr18 44192920 44193047 -42484501 - MIR3 SINE MIR -14 194 62 280 304 32 24 chr18 44193119 44193244 -42484304 + MIR SINE MIR 66 191 -71 310 261 67 36 chr18 44193261 44193411 -42484137 + L1ME LINE L1 5517 5675 -495 221 289 58 58 chr18 44194657 44194761 -42482787 + MIR SINE MIR 84 187 -75 2149 129 81 42 chr18 44195266 44195676 -42481872 + MSTC LTR MaLR 1 426 -2 2280 113 0 0 chr18 44195910 44196220 -42481328 + AluSx SINE Alu 3 312 0 268 317 20 10 chr18 44196846 44196947 -42480601 + MIR3 SINE MIR 93 194 -14 253 180 33 33 chr18 44197282 44197343 -42480205 + L2 LINE L2 3189 3249 -64 378 212 0 9 chr18 44197351 44197464 -42480084 - L1MB7 LINE L1 0 6184 6073 516 191 43 28 chr18 44197475 44197616 -42479932 + L1MB4 LINE L1 6038 6180 0 21 36 0 0 chr18 44197864 44197892 -42479656 + AT_rich Low_complexity Low_complexity 1 28 0 826 269 16 64 chr18 44198045 44198484 -42479064 + L1MC5 LINE L1 7046 7463 -498 933 213 52 35 chr18 44198502 44198868 -42478680 + L1MC5 LINE L1 7555 7926 -35 300 324 146 45 chr18 44199624 44199911 -42477637 + L1MC4a LINE L1 6414 6729 -1079 267 301 9 0 chr18 44199979 44200092 -42477456 + L1M4 LINE L1 48 161 -6381 617 280 65 68 chr18 44200604 44201274 -42476274 + L1M4 LINE L1 959 1610 -5024 1300 238 32 75 chr18 44201285 44201821 -42475727 + MER34 LTR ERV1 1 762 -25 244 203 31 16 chr18 44201865 44201929 -42475619 + L1M4 LINE L1 1512 1576 -5070 1511 285 41 30 chr18 44201932 44202520 -42475028 + L1MCc LINE L1 3 939 -5483 * 3991 205 30 59 chr18 44202516 44204303 -42473245 + L1MC3 LINE L1 4600 5400 -746 413 255 21 91 chr18 44204303 44204546 -42473002 + L1MA9 LINE L1 6057 6282 -30 5042 161 116 98 chr18 44204558 44205332 -42472216 + L1MC3 LINE L1 6325 7229 -556 241 284 11 21 chr18 44205332 44205427 -42472121 + MLT1F1 LTR MaLR 29 122 -445 5042 161 116 98 chr18 44205427 44205987 -42471561 + L1MC3 LINE L1 7229 7778 -7 1348 269 82 19 chr18 44205994 44206577 -42470971 + L1M4 LINE L1 1717 2336 -4489 1639 179 7 0 chr18 44206733 44207050 -42470498 - AluJb SINE Alu 0 319 1 272 120 0 20 chr18 44207107 44207157 -42470391 + L1M4 LINE L1 3384 3432 -3212 310 271 112 71 chr18 44207169 44207339 -42470209 + HERV16 LTR ERVL 1386 1562 -3434 1242 340 38 18 chr18 44207424 44207977 -42469571 + HERV16 LTR ERVL 1730 2293 -2703 14879 146 88 22 chr18 44208747 44212284 -42465264 + L1PBa LINE L1 1 3775 -3087 495 321 118 21 chr18 44213548 44213785 -42463763 - MIR SINE MIR -1 261 2 249 182 0 0 chr18 44213859 44213914 -42463634 + (CA)n Simple_repeat Simple_repeat 1 55 0 339 289 82 31 chr18 44215721 44215915 -42461633 + MIR SINE MIR 58 261 -1 1668 161 121 0 chr18 44216328 44216650 -42460898 - MLT1A1 LTR MaLR 0 365 5 240 329 13 0 chr18 44217198 44217277 -42460271 + L2 LINE L2 3226 3305 -8 235 313 62 0 chr18 44217330 44217442 -42460106 + L1ME4a LINE L1 6002 6120 -1 443 214 62 17 chr18 44217512 44217742 -42459806 + L1ME3A LINE L1 5882 6166 -4 7532 33 0 1 chr18 44217992 44218916 -42458632 + L1PA4 LINE L1 5231 6152 -3 23 0 0 0 chr18 44218916 44218939 -42458609 + AT_rich Low_complexity Low_complexity 1 23 0 273 102 163 0 chr18 44219089 44219138 -42458410 - THE1B LTR MaLR 0 364 308 229 69 0 0 chr18 44219199 44219228 -42458320 - THE1B LTR MaLR -30 334 306 1812 133 41 61 chr18 44219234 44219579 -42457969 - THE1B LTR MaLR -26 338 1 11444 103 12 0 chr18 44219580 44221134 -42456414 - THE1B-int LTR MaLR -7 1573 1 2197 129 30 28 chr18 44221134 44221497 -42456051 - THE1B LTR MaLR 0 364 1 1914 141 3 17 chr18 44221905 44222195 -42455353 + AluSx SINE Alu 7 292 -20 23 0 0 0 chr18 44222596 44222619 -42454929 + AT_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr18 44222795 44222832 -42454716 + AT_rich Low_complexity Low_complexity 1 37 0 22 80 0 0 chr18 44222854 44222904 -42454644 + AT_rich Low_complexity Low_complexity 1 50 0 379 252 16 55 chr18 44223281 44223408 -42454140 + MIR SINE MIR 92 213 -49 199 335 165 18 chr18 44223540 44223704 -42453844 - MIR SINE MIR -1 261 74 533 328 99 37 chr18 44223712 44224035 -42453513 + L3 LINE CR1 876 1218 -359 225 349 94 0 chr18 44224631 44224737 -42452811 + L3 LINE CR1 1440 1555 -22 335 261 157 46 chr18 44225554 44225707 -42451841 + MIR SINE MIR 81 250 -12 1588 215 50 13 chr18 44225843 44226219 -42451329 + MLT1B LTR MaLR 1 390 0 862 285 55 0 chr18 44227178 44227431 -42450117 - LTR16C LTR ERVL 0 491 225 1819 143 24 17 chr18 44228422 44228600 -42448948 - AluSx SINE Alu -10 302 120 198 0 0 0 chr18 44228600 44228622 -42448926 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1819 143 24 17 chr18 44228622 44228736 -42448812 - AluSx SINE Alu -192 120 8 183 265 103 29 chr18 44229065 44229133 -42448415 - L2 LINE L2 -16 3297 3225 2607 237 28 30 chr18 44229531 44230864 -42446684 - L1ME1 LINE L1 -5 6161 4830 183 114 0 0 chr18 44231508 44231543 -42446005 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2501 179 77 0 chr18 44231779 44232276 -42445272 - MER44D DNA MER2_type 0 605 16 4188 149 19 29 chr18 44233220 44233895 -42443653 - L1PA16 LINE L1 -9 6157 5477 188 0 0 69 chr18 44233895 44233924 -42443624 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1790 163 0 17 chr18 44233924 44234212 -42443336 - AluSx SINE Alu -29 283 1 4188 149 19 29 chr18 44234212 44234333 -42443215 - L1PA16 LINE L1 -687 5479 5368 287 233 42 101 chr18 44234404 44234593 -42442955 + L1MC4 LINE L1 7712 7889 -153 296 197 115 16 chr18 44234664 44234786 -42442762 + L1MC4 LINE L1 7909 8042 0 2843 138 7 19 chr18 44234889 44235353 -42442195 - LTR22A LTR ERVK 0 458 1 944 204 18 9 chr18 44236020 44236245 -42441303 + L1ME1 LINE L1 5935 6161 -5 2294 126 21 13 chr18 44238289 44238661 -42438887 - THE1C LTR MaLR 0 375 1 3070 118 2 28 chr18 44239957 44240172 -42437376 + MLT2A2 LTR ERVL 1 220 -233 1684 104 119 15 chr18 44240172 44240441 -42437107 + AluSx SINE Alu 1 297 -15 3070 118 2 28 chr18 44240441 44240690 -42436858 + MLT2A2 LTR ERVL 220 453 0 401 283 0 10 chr18 44241809 44241908 -42435640 - MIR SINE MIR -116 146 49 2392 153 13 0 chr18 44241948 44242346 -42435202 - MER57A LTR ERV1 0 403 1 22 0 0 0 chr18 44244546 44244568 -42432980 + AT_rich Low_complexity Low_complexity 1 22 0 371 258 117 8 chr18 44246373 44246501 -42431047 + MIR3 SINE MIR 65 206 -2 336 111 0 0 chr18 44246704 44246758 -42430790 + (TC)n Simple_repeat Simple_repeat 1 54 0 863 90 15 0 chr18 44246771 44246905 -42430643 + (TTCC)n Simple_repeat Simple_repeat 2 137 0 208 294 130 40 chr18 44246906 44247083 -42430465 - L2 LINE L2 -13 3300 3108 27 49 0 0 chr18 44248131 44248172 -42429376 + AT_rich Low_complexity Low_complexity 1 41 0 545 254 16 8 chr18 44249091 44249217 -42428331 + FLAM_A SINE Alu 1 127 -15 420 322 53 26 chr18 44250852 44251079 -42426469 + L1MC4a LINE L1 4993 5225 -921 793 309 147 37 chr18 44251113 44252661 -42424887 + L1MC4a LINE L1 5267 6984 -824 255 279 67 35 chr18 44252680 44253127 -42424421 + L1MC4 LINE L1 6964 7418 -624 2136 129 0 16 chr18 44253353 44253670 -42423878 + AluSx SINE Alu 1 312 0 30391 138 20 9 chr18 44253824 44255086 -42422462 - L1PB4 LINE L1 -210 5946 4699 2252 115 50 19 chr18 44255086 44255450 -42422098 - THE1C LTR MaLR 0 375 1 30391 138 20 9 chr18 44255450 44260061 -42417487 - L1PB4 LINE L1 -1457 4699 11 232 238 16 16 chr18 44260823 44260886 -42416662 - MER94 DNA DNA -71 63 1 331 302 8 70 chr18 44261465 44261594 -42415954 + L3 LINE CR1 978 1098 -479 689 280 16 21 chr18 44261979 44262172 -42415376 - MIR SINE MIR -49 213 22 216 179 0 0 chr18 44262173 44262212 -42415336 + T-rich Low_complexity Low_complexity 2 40 0 2975 206 106 10 chr18 44262217 44263085 -42414463 - L1MC4 LINE L1 0 8042 7092 233 160 0 20 chr18 44263095 44263145 -42414403 + CT-rich Low_complexity Low_complexity 2 50 0 323 42 42 0 chr18 44263214 44263262 -42414286 + (TTCC)n Simple_repeat Simple_repeat 1 50 0 402 225 127 62 chr18 44263264 44263328 -42414220 - L1MC4a LINE L1 -781 7079 7021 2162 133 0 0 chr18 44263328 44263630 -42413918 + AluSg SINE Alu 1 302 -8 402 225 127 62 chr18 44263630 44263898 -42413650 - L1MC4a LINE L1 -839 7021 6710 345 302 83 29 chr18 44263945 44264366 -42413182 + L2 LINE L2 2596 3040 -273 2019 128 0 55 chr18 44265688 44266016 -42411532 - AluSg SINE Alu 0 310 1 1418 250 109 24 chr18 44266204 44266672 -42410876 - L1ME3 LINE L1 -25 6137 5630 2014 156 8 32 chr18 44266691 44267062 -42410486 - THE1B LTR MaLR 0 364 3 470 258 16 0 chr18 44267174 44267298 -42410250 - L1ME3 LINE L1 -593 5573 5448 549 231 64 35 chr18 44267706 44267879 -42409669 + LTR36 LTR ERV1 434 611 0 2425 104 0 0 chr18 44268991 44269300 -42408248 - AluSc SINE Alu 0 309 1 377 295 98 40 chr18 44269321 44269494 -42408054 + MIR SINE MIR 20 202 -60 268 176 29 0 chr18 44270048 44270116 -42407432 + CT-rich Low_complexity Low_complexity 2 71 0 676 216 213 86 chr18 44270131 44270399 -42407149 - AluJb SINE Alu 0 302 1 656 188 181 7 chr18 44271001 44271145 -42406403 + MER5A DNA MER1_type 15 183 -6 282 330 0 0 chr18 44271337 44271434 -42406114 - L3b LINE CR1 -385 1198 1102 198 349 30 0 chr18 44271639 44271705 -42405843 - L2 LINE L2 -8 3305 3238 244 366 0 0 chr18 44272513 44272614 -42404934 + MER94 DNA DNA 6 106 -28 240 275 153 51 chr18 44273264 44273500 -42404048 + L3 LINE CR1 970 1229 -348 279 311 96 0 chr18 44274037 44274172 -42403376 + MLT1L LTR MaLR 142 289 -326 314 287 65 9 chr18 44274338 44274446 -42403102 + MLT1K LTR MaLR 469 582 -6 1394 199 53 6 chr18 44274519 44274856 -42402692 - L1MD3 LINE L1 -14 7981 7629 252 353 60 0 chr18 44275170 44275286 -42402262 - L2 LINE L2 -7 3265 3143 181 135 39 0 chr18 44275456 44275508 -42402040 + (TA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr18 44275881 44275902 -42401646 + AT_rich Low_complexity Low_complexity 1 21 0 241 229 29 29 chr18 44276427 44276497 -42401051 + GA-rich Low_complexity Low_complexity 3 72 0 200 93 70 0 chr18 44276739 44276782 -42400766 + (TA)n Simple_repeat Simple_repeat 1 46 0 542 288 12 12 chr18 44278004 44278174 -42399374 + MLT1J LTR MaLR 8 177 -334 2035 179 47 17 chr18 44278209 44278616 -42398932 + MSTB LTR MaLR 6 424 -2 526 285 92 39 chr18 44278620 44278880 -42398668 + MLT1J LTR MaLR 206 479 -32 563 220 28 0 chr18 44279892 44280033 -42397515 - L1MA10 LINE L1 -7 6327 6183 4847 152 15 16 chr18 44280061 44281015 -42396533 - L1MA5 LINE L1 0 6300 5352 22 0 0 0 chr18 44282170 44282192 -42395356 + AT_rich Low_complexity Low_complexity 1 22 0 216 405 24 0 chr18 44283362 44283446 -42394102 + L2 LINE L2 3102 3187 -85 246 242 0 16 chr18 44284053 44284115 -42393433 + LTR67 LTR ERVL 497 557 0 592 334 54 40 chr18 44285305 44285784 -42391764 + MERVL LTR ERVL 1376 1861 -3903 947 225 62 26 chr18 44285784 44286081 -42391467 - MSTD LTR MaLR 0 396 111 2277 145 106 0 chr18 44286081 44286467 -42391081 - MSTA LTR MaLR -1 427 1 8516 167 61 7 chr18 44286467 44288032 -42389516 - MSTA-int LTR MaLR 0 1651 3 2374 120 115 0 chr18 44288034 44288418 -42389130 - MSTA LTR MaLR 0 428 1 947 225 62 26 chr18 44288418 44288457 -42389091 - MSTD LTR MaLR -285 111 15 520 292 115 49 chr18 44288500 44288866 -42388682 + MERVL LTR ERVL 1890 2279 -3485 329 319 48 19 chr18 44288906 44289116 -42388432 + MERVL LTR ERVL 2352 2567 -3197 266 222 0 0 chr18 44289308 44289379 -42388169 + MERVL LTR ERVL 2715 2768 -2717 795 319 88 18 chr18 44289471 44289960 -42387588 + MERVL LTR ERVL 2941 3463 -2301 264 360 72 8 chr18 44290298 44290423 -42387125 - MIR3 SINE MIR -71 137 5 224 331 114 42 chr18 44290814 44291173 -42386375 - L3 LINE CR1 -263 1314 930 454 176 22 0 chr18 44292259 44292350 -42385198 - FRAM SINE Alu -10 166 74 641 235 0 0 chr18 44292357 44292489 -42385059 - FLAM_A SINE Alu 0 133 2 195 296 61 52 chr18 44292738 44292853 -42384695 + L2 LINE L2 2977 3092 -180 268 312 28 19 chr18 44292928 44293034 -42384514 + MIR SINE MIR 54 159 -73 296 241 170 9 chr18 44293478 44293590 -42383958 - MARNA DNA Mariner -20 566 437 274 328 83 52 chr18 44293805 44293997 -42383551 + MIR SINE MIR 57 254 -8 611 320 137 4 chr18 44294729 44295007 -42382541 + L2 LINE L2 2457 2771 -543 1981 227 243 16 chr18 44295257 44296163 -42381385 - LTR28 LTR ERV1 0 1020 1 203 289 44 56 chr18 44297687 44297777 -42379771 + MIR3 SINE MIR 91 179 -29 306 0 0 0 chr18 44298022 44298056 -42379492 + (TA)n Simple_repeat Simple_repeat 1 34 0 991 103 23 6 chr18 44298058 44298232 -42379316 - L1MA2 LINE L1 -91 6213 6037 2020 140 0 3 chr18 44298235 44298520 -42379028 - AluY SINE Alu -27 284 1 408 45 45 0 chr18 44298717 44298784 -42378764 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 11526 160 15 18 chr18 44298871 44300934 -42376614 - L1MA3 LINE L1 -1 7723 5654 1496 184 0 8 chr18 44300934 44301219 -42376329 + AluJb SINE Alu 36 318 0 2475 83 0 0 chr18 44301220 44301522 -42376026 + AluY SINE Alu 1 302 -9 11526 160 15 18 chr18 44301522 44302198 -42375350 - L1MA3 LINE L1 -2070 5654 4977 2308 120 0 0 chr18 44302198 44302507 -42375041 - AluSg SINE Alu -1 309 1 11526 160 15 18 chr18 44302507 44303272 -42374276 - L1MA3 LINE L1 -2747 4977 4227 11480 172 25 30 chr18 44303273 44305469 -42372079 - L1MA3 LINE L1 -5369 2196 12 536 343 46 0 chr18 44305688 44305904 -42371644 + MIR SINE MIR 37 262 0 220 339 0 0 chr18 44306590 44306655 -42370893 - MIR SINE MIR -35 227 163 194 328 0 0 chr18 44308384 44308451 -42369097 - MIR3 SINE MIR -19 189 123 276 216 72 31 chr18 44308999 44309096 -42368452 - MER103 DNA DNA -61 105 5 336 102 0 0 chr18 44309101 44309150 -42368398 + (TG)n Simple_repeat Simple_repeat 1 49 0 292 302 69 31 chr18 44310996 44311155 -42366393 + MIR SINE MIR 58 222 -40 1937 249 55 119 chr18 44311967 44312994 -42364554 - L2 LINE L2 -483 2831 1871 254 371 84 60 chr18 44313336 44313503 -42364045 + MIR3 SINE MIR 17 187 -21 219 270 135 0 chr18 44315282 44315356 -42362192 + MIR SINE MIR 22 105 -103 249 33 0 0 chr18 44316550 44316580 -42360968 + (CA)n Simple_repeat Simple_repeat 2 31 0 218 290 117 74 chr18 44316598 44316760 -42360788 + L2 LINE L2 2935 3103 -169 200 29 0 59 chr18 44316928 44316962 -42360586 + (TTTTTA)n Simple_repeat Simple_repeat 6 37 0 1807 119 10 17 chr18 44316966 44317259 -42360289 - L1PA10 LINE L1 0 6168 5878 18986 50 3 1 chr18 44317275 44320444 -42357104 - L1PA5 LINE L1 -6 6148 2975 334 267 82 41 chr18 44322119 44322265 -42355283 - MIR SINE MIR -17 245 94 270 0 0 0 chr18 44322419 44322449 -42355099 + (CA)n Simple_repeat Simple_repeat 1 30 0 358 192 0 158 chr18 44323706 44323852 -42353696 + MER63 DNA MER1_type 1 749 -313 213 39 0 0 chr18 44323985 44324011 -42353537 + (CCA)n Simple_repeat Simple_repeat 3 28 0 22 35 0 0 chr18 44324075 44324104 -42353444 + AT_rich Low_complexity Low_complexity 1 29 0 613 173 8 45 chr18 44324196 44324329 -42353219 + MER6 DNA MER2_type 738 865 0 1919 178 120 8 chr18 44325151 44325534 -42352014 - MSTA LTR MaLR 0 428 3 7925 195 27 11 chr18 44325553 44327161 -42350387 - MSTA-int LTR MaLR -16 1635 1 2260 126 126 5 chr18 44327161 44327543 -42350005 - MSTA LTR MaLR 0 428 1 285 109 0 0 chr18 44327703 44327749 -42349799 + (TG)n Simple_repeat Simple_repeat 2 47 0 254 268 217 22 chr18 44327780 44327918 -42349630 - L3 LINE CR1 -996 581 417 226 335 65 52 chr18 44328840 44328995 -42348553 - MIR3 SINE MIR -35 173 17 580 349 151 33 chr18 44330353 44331053 -42346495 - L2 LINE L2 -505 2809 2027 340 319 49 7 chr18 44331606 44331750 -42345798 - L1MC4a LINE L1 -1925 5883 5734 197 381 50 52 chr18 44331797 44332415 -42345133 - L2 LINE L2 -2493 821 203 2066 108 3 62 chr18 44332415 44332739 -42344809 + AluSx SINE Alu 1 305 -7 197 381 50 52 chr18 44332739 44332778 -42344770 - L2 LINE L2 -3111 203 165 194 253 53 13 chr18 44333084 44333159 -42344389 + MIR3 SINE MIR 96 173 -35 227 363 88 26 chr18 44333701 44333814 -42343734 - L2 LINE L2 -13 3259 3140 426 304 148 51 chr18 44334489 44334841 -42342707 + L2 LINE L2 2928 3313 0 2227 121 0 0 chr18 44335837 44336134 -42341414 - AluSx SINE Alu -10 302 6 200 143 24 0 chr18 44337202 44337244 -42340304 + (ATG)n Simple_repeat Simple_repeat 2 44 0 222 174 0 0 chr18 44337275 44337321 -42340227 + (TA)n Simple_repeat Simple_repeat 2 47 0 438 349 66 63 chr18 44338096 44338589 -42338959 - L2 LINE L2 0 3272 2771 228 310 38 111 chr18 44338751 44339119 -42338429 - L2 LINE L2 -15 3257 2917 279 262 67 67 chr18 44339551 44339700 -42337848 - MIR SINE MIR -17 245 97 677 124 78 16 chr18 44340162 44340291 -42337257 + LTR7 LTR ERV1 1 137 -313 705 176 0 33 chr18 44340397 44340550 -42336998 + LTR7 LTR ERV1 303 450 0 14813 127 6 32 chr18 44340550 44343609 -42333939 + HERVH LTR ERV1 1 3297 -4416 14458 99 8 18 chr18 44343605 44347642 -42329906 + HERVH LTR ERV1 3624 7713 0 * 1160 159 140 89 chr18 44347642 44348070 -42329478 + LTR7 LTR ERV1 1 450 0 771 256 34 0 chr18 44348964 44349140 -42328408 - MER63A DNA MER1_type -2 208 27 199 356 134 41 chr18 44349569 44349763 -42327785 + MIR SINE MIR 16 227 -35 377 323 60 7 chr18 44350606 44350774 -42326774 + MIR SINE MIR 58 230 -32 189 0 0 0 chr18 44351604 44351625 -42325923 + (T)n Simple_repeat Simple_repeat 1 21 0 2319 160 19 12 chr18 44352150 44352576 -42324972 - MER57B LTR ERV1 -5 429 1 845 244 25 90 chr18 44352597 44352998 -42324550 - MLT1C LTR MaLR -92 375 1 24 0 0 0 chr18 44353334 44353358 -42324190 + AT_rich Low_complexity Low_complexity 1 24 0 1284 171 0 5 chr18 44354433 44354644 -42322904 + AluSc SINE Alu 98 307 -2 419 0 20 0 chr18 44354689 44354740 -42322808 + (TG)n Simple_repeat Simple_repeat 2 53 0 282 56 0 0 chr18 44355679 44355715 -42321833 + (TG)n Simple_repeat Simple_repeat 2 37 0 2000 130 3 7 chr18 44356797 44357090 -42320458 + AluSc SINE Alu 1 292 -17 225 303 67 34 chr18 44357575 44357664 -42319884 - MIR SINE MIR -97 111 20 781 188 0 0 chr18 44358075 44358208 -42319340 - FLAM_C SINE Alu 0 133 1 181 186 86 86 chr18 44358211 44358281 -42319267 - MIR SINE MIR -114 148 79 1071 199 33 0 chr18 44359300 44359511 -42318037 - MER20 DNA MER1_type 0 219 2 279 0 0 0 chr18 44359975 44360006 -42317542 + (TG)n Simple_repeat Simple_repeat 2 32 0 260 279 0 0 chr18 44360812 44360873 -42316675 - MIR3 SINE MIR -23 185 125 371 315 94 0 chr18 44361962 44362111 -42315437 + MIR SINE MIR 30 192 -70 436 279 147 37 chr18 44362157 44362429 -42315119 - L2 LINE L2 -1 3312 3011 2205 123 26 3 chr18 44362429 44362779 -42314769 - THE1B LTR MaLR 0 364 7 353 304 123 23 chr18 44362784 44362955 -42314593 - L2 LINE L2 -297 3016 2829 210 258 0 0 chr18 44363631 44363693 -42313855 + (TG)n Simple_repeat Simple_repeat 2 63 0 412 229 0 22 chr18 44364275 44364454 -42313094 + CT-rich Low_complexity Low_complexity 6 180 0 333 0 0 0 chr18 44365058 44365095 -42312453 + (TG)n Simple_repeat Simple_repeat 2 38 0 232 340 73 33 chr18 44365896 44366046 -42311502 - MIR SINE MIR -56 206 51 216 352 0 23 chr18 44366297 44366385 -42311163 + L2 LINE L2 3187 3272 0 1190 119 0 62 chr18 44366635 44366829 -42310719 - AluSp SINE Alu 0 313 132 1869 74 9 0 chr18 44366847 44367078 -42310470 - AluSx SINE Alu -17 295 63 461 132 0 0 chr18 44367188 44367256 -42310292 - AluSx SINE Alu -245 68 1 383 307 48 8 chr18 44368731 44368874 -42308674 - MIR3 SINE MIR -47 161 34 237 178 0 0 chr18 44369618 44369663 -42307885 + (TG)n Simple_repeat Simple_repeat 2 46 0 986 186 93 0 chr18 44369872 44370109 -42307439 - MER33 DNA MER1_type -8 316 58 280 297 77 25 chr18 44370112 44370310 -42307238 - MER63 DNA MER1_type 0 1062 3 290 114 23 0 chr18 44370312 44370356 -42307192 - MER33 DNA MER1_type -278 46 2 22 0 0 0 chr18 44370775 44370797 -42306751 + AT_rich Low_complexity Low_complexity 1 22 0 29 28 0 0 chr18 44370840 44370876 -42306672 + AT_rich Low_complexity Low_complexity 1 36 0 270 354 131 0 chr18 44370993 44371199 -42306349 - MIR SINE MIR -28 234 2 250 353 12 0 chr18 44371382 44371467 -42306081 + L2 LINE L2 3184 3269 -3 698 293 37 9 chr18 44371552 44371767 -42305781 - MIR SINE MIR -12 250 30 1782 184 7 7 chr18 44371788 44372097 -42305451 - AluJb SINE Alu -3 309 1 430 208 117 101 chr18 44373603 44373901 -42303647 - MER5C DNA MER1_type -5 319 17 342 272 0 9 chr18 44374782 44374896 -42302652 + (TA)n Simple_repeat Simple_repeat 2 114 0 669 288 50 24 chr18 44374953 44375336 -42302212 - L1ME3A LINE L1 -286 6695 6303 299 250 161 89 chr18 44375336 44375560 -42301988 + MLT1I LTR MaLR 1 240 -169 638 281 49 49 chr18 44375589 44376223 -42301325 - L1ME3A LINE L1 -1382 5575 4942 476 346 36 36 chr18 44376360 44376724 -42300824 - L1ME3A LINE L1 -2133 4824 4461 897 240 5 5 chr18 44376732 44376932 -42300616 + MER20 DNA MER1_type 1 200 -19 257 0 0 0 chr18 44377032 44377062 -42300486 + L1P1 LINE L1 5440 5469 -686 318 280 84 41 chr18 44377102 44377587 -42299961 - L1ME3A LINE L1 -2666 4291 3786 7286 86 7 0 chr18 44377856 44378894 -42298654 + L1P LINE L1 4259 5303 -843 306 373 43 0 chr18 44378933 44379118 -42298430 + L1 LINE L1 3644 3836 -2310 267 100 0 0 chr18 44379121 44379161 -42298387 + L1P LINE L1 5314 5353 -801 6298 65 18 1 chr18 44379161 44379995 -42297553 + L1PA7 LINE L1 5304 6151 -3 2076 130 0 0 chr18 44380551 44380835 -42296713 - AluSx SINE Alu -13 299 16 295 267 103 40 chr18 44381020 44381344 -42296204 - L1MDa LINE L1 -4632 2325 2032 198 171 0 0 chr18 44381344 44381385 -42296163 + (CA)n Simple_repeat Simple_repeat 2 42 0 387 262 70 14 chr18 44381390 44381604 -42295944 - L1MDa LINE L1 -4905 2042 1817 306 51 0 0 chr18 44381685 44381724 -42295824 - L1PA2 LINE L1 -64 6091 6053 614 44 77 11 chr18 44381724 44381797 -42295751 + L1PA2 LINE L1 6058 6154 -1 528 277 39 25 chr18 44381914 44382199 -42295349 - L1MDa LINE L1 -5180 1679 1391 329 344 53 49 chr18 44382456 44382741 -42294807 - L1MDa LINE L1 -6554 305 20 397 329 63 54 chr18 44382783 44382905 -42294643 - L1MEd LINE L1 -5303 816 697 2375 59 0 33 chr18 44382905 44383211 -42294337 + AluY SINE Alu 1 296 -15 397 329 63 54 chr18 44383211 44383422 -42294126 - L1MEd LINE L1 -5422 697 480 289 306 21 69 chr18 44384099 44384243 -42293305 - L3 LINE CR1 -85 1492 1356 203 307 117 60 chr18 44384847 44385130 -42292418 - L2 LINE L2 -815 2499 2201 196 360 20 20 chr18 44385961 44386061 -42291487 - MER5B DNA MER1_type -1 177 78 430 244 12 0 chr18 44386087 44386173 -42291375 - Tigger7 DNA MER2_type -5 2482 2396 * 2981 164 11 32 chr18 44386167 44386704 -42290844 - Tigger7 DNA MER2_type -1961 526 1 577 338 9 76 chr18 44386775 44386985 -42290563 - MER91A DNA MER1_type 0 196 1 305 294 128 0 chr18 44387795 44387897 -42289651 - MIR SINE MIR -64 144 30 276 286 105 9 chr18 44388852 44388957 -42288591 - MIR3 SINE MIR -30 178 64 277 275 14 0 chr18 44388962 44389031 -42288517 + CT-rich Low_complexity Low_complexity 3 72 0 251 157 20 0 chr18 44389054 44389105 -42288443 + CT-rich Low_complexity Low_complexity 3 54 0 218 326 43 71 chr18 44389711 44389852 -42287696 + L2 LINE L2 3159 3295 -18 319 353 8 8 chr18 44390099 44390218 -42287330 + MIR3 SINE MIR 81 199 -9 216 316 25 38 chr18 44391442 44391521 -42286027 + MIR3 SINE MIR 117 194 -14 192 163 0 0 chr18 44391933 44391976 -42285572 + C-rich Low_complexity Low_complexity 5 47 0 360 0 0 0 chr18 44392763 44392803 -42284745 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 36 0 0 chr18 44393183 44393211 -42284337 + AT_rich Low_complexity Low_complexity 1 28 0 397 325 136 0 chr18 44393478 44393632 -42283916 + MIR3 SINE MIR 34 208 0 2056 93 0 45 chr18 44395959 44396249 -42281299 + AluSc SINE Alu 21 297 -12 1444 169 19 136 chr18 44396889 44397147 -42280401 - MLT1A1 LTR MaLR 0 365 171 2291 84 3 10 chr18 44397147 44397457 -42280091 - AluSc SINE Alu -1 308 1 1444 169 19 136 chr18 44397457 44397611 -42279937 - MLT1A1 LTR MaLR -194 171 1 6041 135 66 18 chr18 44398121 44399196 -42278352 + Tigger3b DNA MER2_type 16 1142 -89 246 67 0 0 chr18 44399196 44399226 -42278322 + Tigger3b DNA MER2_type 1084 1113 -119 963 156 34 34 chr18 44399226 44399405 -42278143 + Tigger3b DNA MER2_type 1053 1231 -1 197 299 52 0 chr18 44399428 44399505 -42278043 + L2 LINE L2 2920 3000 -313 2096 115 3 0 chr18 44400090 44400378 -42277170 + AluSx SINE Alu 1 289 -23 180 0 0 0 chr18 44400391 44400411 -42277137 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 458 327 97 42 chr18 44400412 44400742 -42276806 + L2 LINE L2 2450 2797 -517 1127 251 64 36 chr18 44400791 44401229 -42276319 + MLT1D LTR MaLR 1 465 -2 247 355 86 11 chr18 44401590 44401683 -42275865 + L2 LINE L2 3158 3257 -15 205 412 0 0 chr18 44402090 44402175 -42275373 + L2 LINE L2 3168 3252 -20 1455 223 69 27 chr18 44402747 44403195 -42274353 - MLT1C LTR MaLR 0 467 1 205 315 62 39 chr18 44403892 44404022 -42273526 - MIR SINE MIR -65 197 65 234 0 0 0 chr18 44404677 44404703 -42272845 + (CA)n Simple_repeat Simple_repeat 2 27 0 569 238 93 21 chr18 44405231 44405424 -42272124 + MER74A LTR ERVL 358 622 0 210 233 0 0 chr18 44405480 44405523 -42272025 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1410 188 49 31 chr18 44406680 44406968 -42270580 + AluJo SINE Alu 7 299 -13 26 50 0 0 chr18 44407028 44407068 -42270480 + AT_rich Low_complexity Low_complexity 1 40 0 301 235 39 20 chr18 44407791 44407893 -42269655 - Charlie8 DNA MER1_type -2231 186 83 664 285 72 0 chr18 44409663 44409870 -42267678 - MIR SINE MIR -27 235 14 511 193 0 0 chr18 44410202 44410414 -42267134 + FLAM_C SINE Alu 31 242 0 275 291 140 64 chr18 44410747 44411012 -42266536 + L2 LINE L2 3028 3312 -1 31 0 0 0 chr18 44413102 44413133 -42264415 + AT_rich Low_complexity Low_complexity 1 31 0 238 203 51 0 chr18 44415037 44415096 -42262452 + L1MB1 LINE L1 6074 6135 -33 1791 131 7 3 chr18 44415096 44415379 -42262169 + L1PB4 LINE L1 5873 6156 0 260 174 43 43 chr18 44415402 44415471 -42262077 + L1MB1 LINE L1 6113 6181 -8 1789 91 22 0 chr18 44417240 44417501 -42260047 - AluSp SINE Alu 0 311 46 26 0 0 0 chr18 44417839 44417865 -42259683 + AT_rich Low_complexity Low_complexity 1 26 0 2849 10 0 0 chr18 44467940 44468253 -42209295 - AluYb8 SINE Alu -5 313 1 3050 204 25 0 chr18 44468253 44468801 -42208747 - Tigger7 DNA MER2_type -1922 565 4 230 253 0 95 chr18 44469660 44469755 -42207793 + MIR SINE MIR 118 203 -59 328 350 73 64 chr18 44470251 44470663 -42206885 - L2 LINE L2 -481 2833 2411 3237 121 80 0 chr18 44470663 44471176 -42206372 - MER41C LTR ERV1 0 554 1 328 350 73 64 chr18 44471176 44471389 -42206159 - L2 LINE L2 -903 2411 2202 406 235 18 14 chr18 44471485 44471631 -42205917 + L1MC4 LINE L1 7907 7995 0 39 38 0 0 chr18 44472482 44472535 -42205013 + AT_rich Low_complexity Low_complexity 1 53 0 515 326 45 11 chr18 44472640 44472818 -42204730 + MIR SINE MIR 79 262 0 204 297 23 62 chr18 44474344 44474472 -42203076 + MER5A DNA MER1_type 67 189 0 267 271 135 0 chr18 44475172 44475268 -42202280 - MIR3 SINE MIR -5 203 95 284 289 54 27 chr18 44475399 44475548 -42202000 - L1ME3A LINE L1 -21 6149 5997 260 259 35 12 chr18 44475571 44475656 -42201892 - L1ME3A LINE L1 -429 5741 5655 332 282 152 19 chr18 44475772 44475806 -42201742 + L1ME3A LINE L1 4886 4914 -1232 3053 28 0 0 chr18 44475806 44476166 -42201382 + L1PA5 LINE L1 5795 6154 0 332 282 152 19 chr18 44476166 44476564 -42200984 + L1ME3A LINE L1 4914 5376 -770 336 292 187 5 chr18 44476633 44476842 -42200706 + L1ME3A LINE L1 5498 5744 -426 256 286 99 31 chr18 44476944 44477105 -42200443 + L1ME3A LINE L1 5991 6162 -8 1988 151 0 7 chr18 44478944 44479222 -42198326 + AluSx SINE Alu 4 281 -31 217 0 0 0 chr18 44479222 44479246 -42198302 + (TAAA)n Simple_repeat Simple_repeat 1 116 0 1988 151 0 7 chr18 44479246 44479259 -42198289 + AluSx SINE Alu 281 293 -19 759 312 124 30 chr18 44480725 44481161 -42196387 - MLT1L LTR MaLR -2 613 137 206 121 0 0 chr18 44481480 44481513 -42196035 + (T)n Simple_repeat Simple_repeat 1 33 0 11132 99 4 3 chr18 44481557 44483947 -42193601 - L1PA8 LINE L1 0 6172 3773 4134 99 30 2 chr18 44484194 44484822 -42192726 - L1MA1 LINE L1 0 6302 5657 1102 81 19 0 chr18 44484822 44484983 -42192565 + L1M1 LINE L1 5329 5492 -810 516 257 16 39 chr18 44485240 44485491 -42192057 - L1ME4a LINE L1 -285 5836 5540 207 0 0 0 chr18 44486286 44486309 -42191239 + (A)n Simple_repeat Simple_repeat 1 23 0 38 22 0 0 chr18 44486328 44486373 -42191175 + AT_rich Low_complexity Low_complexity 1 45 0 12282 195 40 43 chr18 44486848 44488531 -42189017 - L1P4 LINE L1 -729 6140 4452 228 35 0 0 chr18 44488531 44488560 -42188988 + (TG)n Simple_repeat Simple_repeat 2 30 0 12282 195 40 43 chr18 44488560 44491714 -42185834 - L1P4 LINE L1 -2417 4452 1154 2192 68 0 7 chr18 44491714 44491992 -42185556 - AluSg SINE Alu -34 276 1 12282 195 40 43 chr18 44491992 44493141 -42184407 - L1P4 LINE L1 -5715 1154 2 4692 232 49 28 chr18 44493230 44493664 -42183884 - L1MCa LINE L1 -2332 4094 3670 1423 231 83 6 chr18 44493664 44494002 -42183546 + MLT1A1 LTR MaLR 1 364 -1 4692 232 49 28 chr18 44494002 44495487 -42182061 - L1MCa LINE L1 -2756 3670 2135 487 167 42 33 chr18 44495492 44495612 -42181936 + Charlie5 DNA MER1_type 2498 2618 0 315 71 0 0 chr18 44495651 44495693 -42181855 + (TA)n Simple_repeat Simple_repeat 2 43 0 3945 161 18 5 chr18 44495725 44496464 -42181084 - L1PA16 LINE L1 -6 6160 5413 401 122 14 0 chr18 44497611 44497685 -42179863 + (TG)n Simple_repeat Simple_repeat 2 76 0 345 301 31 71 chr18 44498216 44498442 -42179106 - L3 LINE CR1 -145 1432 1216 254 270 0 50 chr18 44498507 44498607 -42178941 + MIR SINE MIR 168 262 0 291 314 165 88 chr18 44498612 44499055 -42178493 - L3 LINE CR1 -319 1258 782 1863 122 36 26 chr18 44501188 44501491 -42176057 + AluJo SINE Alu 1 306 -6 1922 148 0 0 chr18 44502470 44502741 -42174807 - AluSc SINE Alu -38 271 1 873 60 45 0 chr18 44503560 44503694 -42173854 + (TTTC)n Simple_repeat Simple_repeat 4 143 0 244 257 59 50 chr18 44503847 44503948 -42173600 - L2 LINE L2 -8 3264 3163 231 234 31 0 chr18 44504172 44504236 -42173312 + L1MC4 LINE L1 6638 6703 -1339 230 146 0 42 chr18 44504204 44504252 -42173296 - L1MC4 LINE L1 -1339 6703 6658 * 302 299 23 0 chr18 44504254 44504341 -42173207 + L1MC4 LINE L1 6614 6702 -1340 287 194 28 0 chr18 44504341 44504413 -42173135 + (CATA)n Simple_repeat Simple_repeat 1 74 0 1746 202 67 41 chr18 44504457 44504947 -42172601 - MLT1D LTR MaLR -2 503 1 297 0 0 0 chr18 44505431 44505464 -42172084 + (T)n Simple_repeat Simple_repeat 1 33 0 2014 136 0 3 chr18 44505548 44505834 -42171714 - AluSc SINE Alu -16 293 9 244 286 24 79 chr18 44506099 44506225 -42171323 + MIR SINE MIR 24 142 -66 2202 140 24 14 chr18 44506375 44506746 -42170802 - THE1C LTR MaLR 0 375 1 199 320 20 0 chr18 44506874 44506924 -42170624 - MIR SINE MIR -116 92 42 5523 149 16 3 chr18 44507294 44508229 -42169319 - L1PA15 LINE L1 0 6165 5221 3511 204 4 1 chr18 44508226 44508941 -42168607 + L1PA15 LINE L1 4514 5230 -916 * 265 192 0 0 chr18 44509306 44509358 -42168190 - L1ME LINE L1 -332 5832 5781 226 285 49 90 chr18 44512741 44512885 -42164663 + MIR SINE MIR 21 158 -104 222 37 0 0 chr18 44514761 44514788 -42162760 + (A)n Simple_repeat Simple_repeat 1 27 0 206 121 0 0 chr18 44515373 44515406 -42162142 + (A)n Simple_repeat Simple_repeat 1 33 0 412 355 39 0 chr18 44517409 44517564 -42159984 - MIR3 SINE MIR -27 181 21 459 48 0 0 chr18 44518847 44518909 -42158639 + (TA)n Simple_repeat Simple_repeat 2 63 0 262 335 74 48 chr18 44519873 44520183 -42157365 + L2 LINE L2 2991 3308 -5 2019 167 69 84 chr18 44520391 44520587 -42156961 + MLT1D LTR MaLR 1 199 -306 2226 96 13 0 chr18 44520587 44520888 -42156660 + AluSx SINE Alu 1 305 -7 2019 167 69 84 chr18 44520888 44521200 -42156348 + MLT1D LTR MaLR 199 501 -4 359 250 117 0 chr18 44521620 44521740 -42155808 + MIR3 SINE MIR 61 194 -14 1952 143 20 26 chr18 44522154 44522503 -42155045 - Tigger7 DNA MER2_type -12 2575 2229 1160 230 100 10 chr18 44522503 44522847 -42154701 + MER47B DNA MER2_type 1 417 -1 11492 174 16 32 chr18 44522848 44523327 -42154221 - Tigger7 DNA MER2_type -357 2130 1645 2610 30 0 3 chr18 44523327 44523627 -42153921 - AluY SINE Alu -12 299 1 11492 174 16 32 chr18 44523627 44524761 -42152787 - Tigger7 DNA MER2_type -842 1645 560 2910 9 0 0 chr18 44524761 44525076 -42152472 - AluYb8 SINE Alu -3 315 1 11492 174 16 32 chr18 44525076 44525624 -42151924 - Tigger7 DNA MER2_type -1927 560 4 230 253 0 95 chr18 44526483 44526578 -42150970 + MIR SINE MIR 118 203 -59 311 344 77 69 chr18 44527085 44527482 -42150066 - L2 LINE L2 -497 2817 2412 3251 121 80 0 chr18 44527482 44527995 -42149553 - MER41C LTR ERV1 0 554 1 311 344 77 69 chr18 44527995 44528208 -42149340 - L2 LINE L2 -902 2412 2202 388 235 18 14 chr18 44528304 44528450 -42149098 + L1MC4 LINE L1 7907 7995 0 39 38 0 0 chr18 44529301 44529354 -42148194 + AT_rich Low_complexity Low_complexity 1 53 0 506 326 45 11 chr18 44529459 44529637 -42147911 + MIR SINE MIR 79 262 0 207 297 23 62 chr18 44531163 44531291 -42146257 + MER5A DNA MER1_type 67 189 0 268 271 135 0 chr18 44531991 44532087 -42145461 - MIR3 SINE MIR -5 203 95 269 289 54 27 chr18 44532218 44532367 -42145181 - L1ME3A LINE L1 -21 6149 5997 252 259 35 12 chr18 44532390 44532475 -42145073 - L1ME3A LINE L1 -429 5741 5655 287 282 152 19 chr18 44532591 44532625 -42144923 + L1ME3A LINE L1 4886 4914 -1232 3069 28 0 0 chr18 44532625 44532985 -42144563 + L1PA5 LINE L1 5795 6154 0 287 282 152 19 chr18 44532985 44533383 -42144165 + L1ME3A LINE L1 4914 5376 -770 330 292 187 5 chr18 44533452 44533661 -42143887 + L1ME3A LINE L1 5498 5744 -426 247 286 99 31 chr18 44533763 44533924 -42143624 + L1ME3A LINE L1 5991 6162 -8 2388 87 3 0 chr18 44535763 44536063 -42141485 + AluSx SINE Alu 4 304 -8 514 311 47 19 chr18 44536767 44536979 -42140569 + MIR SINE MIR 2 219 -43 339 181 0 95 chr18 44537347 44537385 -42140163 - MER53 DNA DNA -21 168 128 1769 167 7 7 chr18 44537385 44537678 -42139870 - AluJb SINE Alu -19 293 1 339 181 0 95 chr18 44537678 44537744 -42139804 - MER53 DNA DNA -61 128 74 319 318 68 15 chr18 44539184 44539316 -42138232 + L2 LINE L2 3134 3272 0 305 248 86 26 chr18 44539334 44539451 -42138097 + MARNA DNA Mariner 89 212 -374 25 31 0 0 chr18 44539489 44539521 -42138027 + AT_rich Low_complexity Low_complexity 1 32 0 25 65 0 0 chr18 44539844 44539890 -42137658 + AT_rich Low_complexity Low_complexity 1 46 0 2636 204 12 12 chr18 44539920 44540478 -42137070 + MER89 LTR ERV1 2 559 0 339 169 0 34 chr18 44541374 44541463 -42136085 + GA-rich Low_complexity Low_complexity 2 87 0 253 244 113 75 chr18 44542634 44542794 -42134754 + MIR SINE MIR 83 248 -14 21 0 0 0 chr18 44543718 44543739 -42133809 + AT_rich Low_complexity Low_complexity 1 21 0 1714 197 11 22 chr18 44544670 44545035 -42132513 - MLT1A1 LTR MaLR -2 363 3 242 358 25 0 chr18 44545046 44545127 -42132421 - L2 LINE L2 -2 3311 3229 2385 66 0 13 chr18 44545733 44546037 -42131511 + AluY SINE Alu 1 300 -11 225 331 96 32 chr18 44546135 44546292 -42131256 - MLT1J2 LTR MaLR -2 448 282 26 0 0 0 chr18 44546449 44546475 -42131073 + AT_rich Low_complexity Low_complexity 1 26 0 7568 188 22 11 chr18 44547054 44549076 -42128472 + L1PA15 LINE L1 3737 5776 -389 262 200 0 21 chr18 44549135 44549230 -42128318 + (TA)n Simple_repeat Simple_repeat 2 94 0 2164 154 10 13 chr18 44549231 44549615 -42127933 + L1PA15 LINE L1 5783 6165 0 394 245 38 9 chr18 44549840 44549946 -42127602 + MLT1J2 LTR MaLR 46 154 -296 566 374 76 16 chr18 44550230 44550728 -42126820 - L2 LINE L2 -1081 2233 1706 22 56 0 0 chr18 44551261 44551297 -42126251 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr18 44552316 44552344 -42125204 + AT_rich Low_complexity Low_complexity 1 28 0 247 288 61 15 chr18 44552616 44552682 -42124866 + MIR SINE MIR 92 160 -102 195 129 0 0 chr18 44553060 44553091 -42124457 + (A)n Simple_repeat Simple_repeat 1 31 0 214 302 138 60 chr18 44553816 44553932 -42123616 - L2 LINE L2 -6 3266 3142 192 40 0 0 chr18 44554678 44554703 -42122845 + (TC)n Simple_repeat Simple_repeat 2 26 0 486 315 86 43 chr18 44554725 44554954 -42122594 - L1ME4a LINE L1 -58 6063 5845 1195 150 3 184 chr18 44554954 44555307 -42122241 - AluJo SINE Alu -13 289 1 486 315 86 43 chr18 44555307 44555518 -42122030 - L1ME4a LINE L1 -276 5845 5604 43994 37 1 14 chr18 44555518 44561755 -42115793 + L1PA4 LINE L1 2 6152 -3 228 245 86 58 chr18 44561781 44561920 -42115628 - L1ME4a LINE L1 -501 5620 5478 31 92 0 0 chr18 44562083 44562170 -42115378 + AT_rich Low_complexity Low_complexity 1 87 0 24 32 0 0 chr18 44563584 44563615 -42113933 + AT_rich Low_complexity Low_complexity 1 31 0 239 349 92 0 chr18 44564045 44564154 -42113394 - L2 LINE L2 -20 3252 3134 340 254 127 0 chr18 44564504 44564622 -42112926 + MIR SINE MIR 56 188 -74 417 39 0 0 chr18 44565155 44565206 -42112342 + (TG)n Simple_repeat Simple_repeat 2 52 0 264 335 161 26 chr18 44566778 44566933 -42110615 + MIR3 SINE MIR 23 198 -10 1629 171 24 7 chr18 44568095 44568393 -42109155 + L1MCa LINE L1 3 305 -6121 207 162 0 0 chr18 44568569 44568606 -42108942 + (TG)n Simple_repeat Simple_repeat 2 38 0 226 259 0 0 chr18 44568718 44568772 -42108776 + (TA)n Simple_repeat Simple_repeat 2 55 0 1443 186 55 13 chr18 44570244 44570604 -42106944 + MLT2C2 LTR ERVL 1 414 0 189 247 39 52 chr18 44571094 44571171 -42106377 - MIR SINE MIR -38 224 149 320 276 65 62 chr18 44571553 44571778 -42105770 + MLT1J2 LTR MaLR 198 427 -23 22 0 0 0 chr18 44571885 44571907 -42105641 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr18 44572358 44572381 -42105167 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 44572747 44572768 -42104780 + AT_rich Low_complexity Low_complexity 1 21 0 298 373 104 29 chr18 44572768 44573047 -42104501 + L2 LINE L2 2754 3057 -256 2144 112 7 3 chr18 44574030 44574324 -42103224 - AluSp SINE Alu -18 295 1 32 26 0 0 chr18 44574760 44574799 -42102749 + AT_rich Low_complexity Low_complexity 1 39 0 310 155 183 14 chr18 44575013 44575084 -42102464 - MER53 DNA DNA -2 187 105 274 147 191 15 chr18 44575024 44575092 -42102456 + MER53 DNA DNA 24 103 -86 * 319 167 17 0 chr18 44575096 44575156 -42102392 - MER53 DNA DNA -128 61 1 185 212 0 0 chr18 44575170 44575203 -42102345 - MIR SINE MIR -169 93 61 2844 10 0 0 chr18 44576584 44576892 -42100656 + AluY SINE Alu 1 308 -3 2339 221 15 16 chr18 44578022 44578628 -42098920 - L1M2 LINE L1 -4411 2438 1834 7906 197 60 11 chr18 44578730 44579830 -42097718 + L1PB4 LINE L1 3257 4301 -1855 221 73 0 24 chr18 44579830 44579871 -42097677 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 7906 197 60 11 chr18 44579871 44581208 -42096340 + L1PB4 LINE L1 4301 5813 -343 3353 112 30 2 chr18 44581216 44581742 -42095806 - L1MC4a LINE L1 -373 5795 5255 2443 96 8 27 chr18 44581742 44582097 -42095451 + L1PA13 LINE L1 5794 6152 -11 541 257 36 36 chr18 44582097 44582307 -42095241 + L1MC4a LINE L1 5801 6013 -1795 21 0 0 0 chr18 44582704 44582725 -42094823 + AT_rich Low_complexity Low_complexity 1 21 0 1784 172 3 18 chr18 44583073 44583411 -42094137 + L1PB4 LINE L1 5814 6146 -10 23 0 0 0 chr18 44586652 44586675 -42090873 + AT_rich Low_complexity Low_complexity 1 23 0 202 200 0 25 chr18 44586801 44586841 -42090707 + CT-rich Low_complexity Low_complexity 4 42 0 1779 258 71 44 chr18 44587344 44588093 -42089455 - L1ME1 LINE L1 -8 6158 5390 1224 102 0 18 chr18 44588094 44588260 -42089288 - AluSq SINE Alu -18 295 133 4287 249 59 43 chr18 44588260 44589977 -42087571 - L1ME1 LINE L1 -750 5396 3652 353 286 29 100 chr18 44589980 44590291 -42087257 + MLT1D LTR MaLR 5 293 -212 203 0 37 0 chr18 44591212 44591239 -42086309 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 287 333 56 16 chr18 44591666 44591792 -42085756 - L2 LINE L2 -3 3310 3180 2470 248 185 36 chr18 44592802 44594118 -42083430 - L1MC4 LINE L1 -2 8040 6528 210 264 0 38 chr18 44594274 44594327 -42083221 + polypurine Low_complexity Low_complexity 3 53 0 234 0 0 0 chr18 44594403 44594429 -42083119 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 360 0 0 0 chr18 44594428 44594468 -42083080 + (GA)n Simple_repeat Simple_repeat 2 41 0 876 157 0 92 chr18 44594469 44594654 -42082894 - AluJo SINE Alu -38 274 107 252 0 0 0 chr18 44594910 44594938 -42082610 + (TG)n Simple_repeat Simple_repeat 1 28 0 1878 146 7 0 chr18 44594987 44595267 -42082281 - AluSx SINE Alu -29 283 2 318 248 69 21 chr18 44596041 44596186 -42081362 - L1MC5 LINE L1 -185 7776 7625 360 252 49 8 chr18 44596332 44596455 -42081093 - L1MC5 LINE L1 -519 7442 7315 612 278 24 17 chr18 44596543 44596893 -42080655 - L1MC4 LINE L1 -790 7009 6613 393 331 44 71 chr18 44596976 44597292 -42080256 - L2 LINE L2 -248 3065 2755 21 71 0 0 chr18 44597790 44597832 -42079716 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr18 44597841 44597873 -42079675 + AT_rich Low_complexity Low_complexity 1 32 0 205 245 64 43 chr18 44598264 44598358 -42079190 - MER5C DNA MER1_type -219 105 10 * 235 365 131 22 chr18 44598300 44598701 -42078847 + L2 LINE L2 2784 3228 -85 254 264 85 57 chr18 44598766 44598872 -42078676 + MIR SINE MIR 87 195 -67 288 360 11 1 chr18 44599763 44599866 -42077682 - MIR SINE MIR -97 111 9 21 0 0 0 chr18 44600653 44600674 -42076874 + AT_rich Low_complexity Low_complexity 1 21 0 225 97 28 56 chr18 44600856 44600928 -42076620 + (TA)n Simple_repeat Simple_repeat 1 70 0 216 275 33 0 chr18 44600985 44601076 -42076472 + (TATATG)n Simple_repeat Simple_repeat 3 96 0 3719 123 30 15 chr18 44601725 44602328 -42075220 - LTR9 LTR ERV1 0 612 1 225 397 34 14 chr18 44603089 44603235 -42074313 + MIR3 SINE MIR 48 196 -12 313 263 26 0 chr18 44603514 44603590 -42073958 - L2 LINE L2 -21 3292 3215 21 36 0 0 chr18 44604213 44604241 -42073307 + AT_rich Low_complexity Low_complexity 1 28 0 260 346 51 0 chr18 44604363 44604441 -42073107 + MIR3 SINE MIR 92 173 -35 264 120 0 0 chr18 44604895 44604945 -42072603 + (TC)n Simple_repeat Simple_repeat 1 50 0 988 252 65 26 chr18 44605000 44605310 -42072238 + MLT1F1 LTR MaLR 228 549 -18 216 0 0 0 chr18 44605440 44605464 -42072084 + (CACAA)n Simple_repeat Simple_repeat 4 27 0 338 309 150 34 chr18 44605688 44605895 -42071653 + MIR SINE MIR 32 262 0 231 152 0 61 chr18 44606841 44606860 -42070688 + (TA)n Simple_repeat Simple_repeat 1 20 -42 216 0 0 0 chr18 44606860 44606884 -42070664 + (CA)n Simple_repeat Simple_repeat 2 25 0 231 152 0 61 chr18 44606884 44606930 -42070618 + (TA)n Simple_repeat Simple_repeat 20 62 0 21 0 0 0 chr18 44607238 44607259 -42070289 + AT_rich Low_complexity Low_complexity 1 21 0 303 313 30 0 chr18 44607674 44607773 -42069775 - MIR SINE MIR 0 262 161 325 89 0 0 chr18 44607932 44607977 -42069571 - L1PBa LINE L1 -6816 47 3 22 35 0 0 chr18 44608021 44608050 -42069498 + AT_rich Low_complexity Low_complexity 1 29 0 187 195 24 0 chr18 44608827 44608868 -42068680 - L2 LINE L2 -556 2758 2717 1724 43 8 8 chr18 44608942 44609177 -42068371 - L1PA3 LINE L1 -3001 3145 2911 18502 32 0 0 chr18 44609177 44612190 -42065358 + L1PA3 LINE L1 3140 6150 -5 1771 172 0 24 chr18 44613545 44613842 -42063706 - AluJo SINE Alu -21 291 2 189 311 66 57 chr18 44613857 44613963 -42063585 - MIR SINE MIR -55 207 101 244 361 39 0 chr18 44614092 44614227 -42063321 + MIR SINE MIR 16 155 -67 233 314 43 0 chr18 44614943 44615013 -42062535 + L2 LINE L2 2612 2684 -630 935 224 4 46 chr18 44615466 44615703 -42061845 - MLT1A2 LTR MaLR -7 367 141 1282 190 40 28 chr18 44615715 44615968 -42061580 + MLT1A1 LTR MaLR 110 365 0 627 214 0 48 chr18 44615968 44616113 -42061435 - MLT1A2 LTR MaLR -227 138 1 808 261 167 31 chr18 44616129 44616489 -42061059 + MLT1D LTR MaLR 97 505 0 285 257 28 28 chr18 44616806 44616915 -42060633 + L1MC/D LINE L1 5693 5801 -2007 26 82 0 0 chr18 44617153 44617214 -42060334 + AT_rich Low_complexity Low_complexity 1 61 0 207 0 0 0 chr18 44617217 44617240 -42060308 + (T)n Simple_repeat Simple_repeat 1 23 0 537 257 16 39 chr18 44618035 44618286 -42059262 + L1ME4a LINE L1 5540 5836 -285 1110 81 19 0 chr18 44618543 44618704 -42058844 - L1M1 LINE L1 -810 5492 5329 4133 99 30 2 chr18 44618704 44619332 -42058216 + L1MA1 LINE L1 5657 6302 0 11120 99 19 10 chr18 44619579 44621969 -42055579 + L1PA8 LINE L1 3773 6172 0 206 121 0 0 chr18 44622013 44622046 -42055502 + (A)n Simple_repeat Simple_repeat 1 33 0 785 304 129 30 chr18 44622365 44622799 -42054749 + MLT1L LTR MaLR 137 613 -2 1978 156 0 7 chr18 44624265 44624583 -42052965 - AluSx SINE Alu 0 312 1 362 324 40 52 chr18 44624690 44624863 -42052685 - MIR SINE MIR -13 249 79 395 345 61 83 chr18 44625522 44626152 -42051396 + L2 LINE L2 2649 3272 0 243 205 51 64 chr18 44626520 44626598 -42050950 - MIR3 SINE MIR -50 158 82 313 22 43 0 chr18 44628337 44628383 -42049165 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 2222 107 0 3 chr18 44628383 44628682 -42048866 - AluSq SINE Alu -14 299 2 387 89 0 0 chr18 44628682 44628738 -42048810 + (TCTA)n Simple_repeat Simple_repeat 4 59 0 2039 127 0 0 chr18 44628738 44629022 -42048526 - AluSx SINE Alu -28 284 1 30 0 0 0 chr18 44629027 44629057 -42048491 + AT_rich Low_complexity Low_complexity 1 30 0 429 245 0 0 chr18 44629104 44629243 -42048305 + (TA)n Simple_repeat Simple_repeat 1 139 0 507 171 0 0 chr18 44629367 44629455 -42048093 + FRAM SINE Alu 75 162 -14 195 42 0 0 chr18 44630613 44630637 -42046911 + (CA)n Simple_repeat Simple_repeat 2 25 0 196 339 0 0 chr18 44630640 44630696 -42046852 + L2 LINE L2 3250 3305 -8 189 294 153 0 chr18 44632110 44632195 -42045353 + L2 LINE L2 3214 3311 -2 2555 81 145 5 chr18 44632217 44632610 -42044938 + LTR7 LTR ERV1 1 448 -2 3014 101 2 0 chr18 44632612 44633026 -42044522 + HERVH LTR ERV1 1 415 -7298 * 14531 97 7 24 chr18 44633024 44635224 -42042324 + HERVH LTR ERV1 825 2987 -4726 872 149 20 0 chr18 44635218 44635366 -42042182 + HERVH LTR ERV1 3140 3290 -4423 * 3302 115 4 4 chr18 44635365 44635859 -42041689 + HERVH LTR ERV1 3500 3993 -3720 4326 139 0 3 chr18 44635861 44636525 -42041023 + HERVH LTR ERV1 4488 5149 -2564 1317 148 19 0 chr18 44636526 44636742 -42040806 + HERVH LTR ERV1 5600 5819 -1894 2274 102 56 13 chr18 44636742 44637116 -42040432 + HERVH LTR ERV1 7324 7713 0 2687 67 122 5 chr18 44637116 44637517 -42040031 + LTR7 LTR ERV1 1 448 -2 3279 46 2 104 chr18 44638973 44639472 -42038076 + LTR7 LTR ERV1 1 448 -2 354 293 87 8 chr18 44639640 44639882 -42037666 + MIR SINE MIR 2 262 0 21 0 0 0 chr18 44639930 44639951 -42037597 + AT_rich Low_complexity Low_complexity 1 21 0 207 333 45 0 chr18 44640115 44640181 -42037367 + L2 LINE L2 3168 3236 -36 316 295 25 33 chr18 44640383 44640505 -42037043 + MLT1I LTR MaLR 253 373 -36 222 37 0 0 chr18 44641138 44641165 -42036383 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 288 239 229 38 chr18 44641465 44641837 -42035711 + L1ME3A LINE L1 2134 2576 -3570 * 6148 184 9 25 chr18 44641831 44643862 -42033686 + L1PB1 LINE L1 3566 5743 -408 1405 110 32 0 chr18 44643868 44644086 -42033462 + L1PB1 LINE L1 5925 6149 -2 1022 297 64 18 chr18 44644113 44645039 -42032509 + L1ME3A LINE L1 2580 3547 -2599 503 246 46 75 chr18 44645039 44645279 -42032269 + L1ME3A LINE L1 5659 5891 -279 331 178 84 47 chr18 44645294 44645401 -42032147 - L1MC3 LINE L1 -8 7777 7667 352 305 7 21 chr18 44645665 44645806 -42031742 - MER46C DNA MER2_type -120 218 80 246 274 19 28 chr18 44646160 44646266 -42031282 + L1M4 LINE L1 4743 4847 -1299 270 221 13 13 chr18 44646494 44646571 -42030977 + (TA)n Simple_repeat Simple_repeat 2 78 0 26 50 0 0 chr18 44647483 44647523 -42030025 + AT_rich Low_complexity Low_complexity 1 40 0 273 230 0 115 chr18 44647595 44647682 -42029866 - MIR SINE MIR -57 151 75 198 0 0 0 chr18 44648455 44648477 -42029071 + (TTAAA)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr18 44648712 44648734 -42028814 + AT_rich Low_complexity Low_complexity 1 22 0 498 330 132 0 chr18 44650104 44650301 -42027247 + MIR SINE MIR 29 251 -11 754 285 109 44 chr18 44650396 44650892 -42026656 + L2 LINE L2 2782 3307 -6 28 0 0 0 chr18 44652104 44652132 -42025416 + AT_rich Low_complexity Low_complexity 1 28 0 338 377 60 33 chr18 44652744 44653078 -42024470 + L2 LINE L2 1131 1473 -1841 1821 141 30 36 chr18 44653680 44653985 -42023563 - AluSx SINE Alu -9 303 1 1255 200 20 4 chr18 44654057 44654302 -42023246 + MLT2B1 LTR ERVL 272 520 0 220 333 86 52 chr18 44654484 44654658 -42022890 - MIR3 SINE MIR -16 192 13 393 22 0 0 chr18 44654883 44654929 -42022619 + (CA)n Simple_repeat Simple_repeat 2 47 0 189 0 0 0 chr18 44654931 44654952 -42022596 + (TA)n Simple_repeat Simple_repeat 1 21 0 2126 116 3 3 chr18 44654954 44655247 -42022301 - AluSp SINE Alu -20 293 1 570 272 7 0 chr18 44655747 44655883 -42021665 + MIR SINE MIR 8 144 -118 23 0 0 0 chr18 44656838 44656861 -42020687 + AT_rich Low_complexity Low_complexity 1 23 0 1006 163 0 0 chr18 44656861 44657014 -42020534 - AluSg/x SINE Alu -25 287 135 234 348 54 54 chr18 44657200 44657424 -42020124 - L3 LINE CR1 -122 1455 1232 22 0 0 0 chr18 44657806 44657828 -42019720 + AT_rich Low_complexity Low_complexity 1 22 0 3810 143 56 18 chr18 44658075 44658351 -42019197 - Tigger3(Golem) DNA MER2_type 0 3029 2765 2390 81 0 0 chr18 44658351 44658646 -42018902 + AluY SINE Alu 1 295 -16 3810 143 56 18 chr18 44658646 44659087 -42018461 - Tigger3(Golem) DNA MER2_type -264 2765 2285 729 176 0 0 chr18 44659087 44659195 -42018353 - Tigger3(Golem) DNA MER2_type -2921 108 1 208 337 11 11 chr18 44659383 44659475 -42018073 + MIR3 SINE MIR 107 198 -10 2396 113 8 3 chr18 44660915 44661268 -42016280 + THE1A LTR MaLR 1 355 0 11290 103 4 1 chr18 44661268 44662843 -42014705 + THE1A-int LTR MaLR 1 1580 0 2601 110 3 0 chr18 44662843 44663197 -42014351 + THE1A LTR MaLR 1 355 0 235 114 29 43 chr18 44663197 44663267 -42014281 + (TA)n Simple_repeat Simple_repeat 1 69 0 646 328 31 12 chr18 44663999 44664258 -42013290 + MLT1K LTR MaLR 19 282 -306 369 285 97 7 chr18 44664302 44664446 -42013102 + MLT1K LTR MaLR 372 528 -60 406 57 0 0 chr18 44664960 44665050 -42012498 + L1PA3 LINE L1 6085 6174 0 278 288 14 0 chr18 44665956 44666029 -42011519 + A-rich Low_complexity Low_complexity 4 77 0 23 0 0 0 chr18 44666289 44666312 -42011236 + AT_rich Low_complexity Low_complexity 1 23 0 226 347 5 10 chr18 44666567 44666692 -42010856 + MIR SINE MIR 3 127 -81 374 327 0 9 chr18 44667258 44667368 -42010180 - MIR SINE MIR -75 133 25 338 264 0 33 chr18 44667688 44667779 -42009769 + MER21B LTR ERV1 1 88 -775 734 276 83 0 chr18 44667805 44667997 -42009551 + MER21B LTR ERV1 22 229 -634 22 56 0 0 chr18 44669042 44669078 -42008470 + AT_rich Low_complexity Low_complexity 1 36 0 186 103 0 0 chr18 44669420 44669449 -42008099 + (CTTTG)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr18 44669859 44669887 -42007661 + AT_rich Low_complexity Low_complexity 1 28 0 338 341 23 14 chr18 44670293 44670581 -42006967 - MLT1I LTR MaLR -77 332 1 2377 49 0 3 chr18 44670584 44670900 -42006648 + AluY SINE Alu 1 315 0 315 150 0 0 chr18 44671018 44671078 -42006470 + (CA)n Simple_repeat Simple_repeat 2 61 0 268 345 44 0 chr18 44671448 44671561 -42005987 - L2 LINE L2 0 3272 3155 380 259 19 19 chr18 44671762 44671870 -42005678 - MIR SINE MIR -67 195 88 26 0 0 0 chr18 44671940 44671966 -42005582 + AT_rich Low_complexity Low_complexity 1 26 0 1734 263 108 57 chr18 44671982 44672770 -42004778 - L2 LINE L2 -550 2764 1937 2152 216 34 6 chr18 44674271 44674767 -42002781 + MER67D LTR ERV1 1 510 -4 363 313 10 0 chr18 44674998 44675094 -42002454 + MIR SINE MIR 57 153 -109 261 0 0 0 chr18 44675217 44675246 -42002302 + (T)n Simple_repeat Simple_repeat 1 29 0 808 201 95 109 chr18 44675392 44675439 -42002109 - Charlie1a DNA MER1_type -2474 287 241 2102 143 0 0 chr18 44675439 44675746 -42001802 + AluSq SINE Alu 1 307 -6 808 201 95 109 chr18 44675746 44675981 -42001567 - Charlie1a DNA MER1_type -2520 241 9 2163 119 0 0 chr18 44676587 44676899 -42000649 + AluSq SINE Alu 1 312 0 315 0 0 0 chr18 44677044 44677079 -42000469 + (TG)n Simple_repeat Simple_repeat 2 36 0 4996 129 12 25 chr18 44677471 44678309 -41999239 - MER4D LTR ERV1 -45 827 1 403 204 80 0 chr18 44678309 44678397 -41999151 - MIR SINE MIR -72 190 96 306 183 0 0 chr18 44679886 44679957 -41997591 + (TAGA)n Simple_repeat Simple_repeat 3 73 0 24 85 0 0 chr18 44680913 44680972 -41996576 + AT_rich Low_complexity Low_complexity 1 59 0 23 33 0 0 chr18 44681674 44681704 -41995844 + AT_rich Low_complexity Low_complexity 1 30 0 377 344 97 15 chr18 44681762 44681957 -41995591 + MIR SINE MIR 41 251 -11 210 363 0 12 chr18 44682232 44682312 -41995236 + MIR SINE MIR 26 104 -158 24 96 0 0 chr18 44682395 44682468 -41995080 + AT_rich Low_complexity Low_complexity 1 73 0 22 0 0 0 chr18 44682486 44682508 -41995040 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr18 44682853 44682881 -41994667 + AT_rich Low_complexity Low_complexity 1 28 0 1858 52 0 0 chr18 44684497 44684728 -41992820 - L1PA5 LINE L1 -113 6041 5811 945 33 0 17 chr18 44684728 44684845 -41992703 + L1PA5 LINE L1 6037 6154 0 493 204 72 13 chr18 44685186 44685338 -41992210 - Charlie1a DNA MER1_type 0 1455 1295 46 68 0 0 chr18 44685338 44685426 -41992122 + AT_rich Low_complexity Low_complexity 1 88 0 4623 217 55 39 chr18 44685441 44686734 -41990814 - Charlie1a DNA MER1_type -141 1314 1 3679 194 16 4 chr18 44686797 44687534 -41990014 - L1 LINE L1 -1555 4591 3846 2000 100 48 0 chr18 44687843 44688133 -41989415 - AluSx SINE Alu -8 304 1 218 323 0 42 chr18 44688167 44688263 -41989285 - MIR SINE MIR -68 194 103 600 371 39 45 chr18 44689138 44689675 -41987873 + MLT1K LTR MaLR 33 566 -22 240 411 13 7 chr18 44689956 44690107 -41987441 - MIR SINE MIR -51 211 60 818 266 108 21 chr18 44690900 44691012 -41986536 - L2 LINE L2 -1043 2271 2170 207 0 0 0 chr18 44691012 44691035 -41986513 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 818 266 108 21 chr18 44691035 44691208 -41986340 - L2 LINE L2 -1144 2170 1961 4115 115 123 129 chr18 44692468 44693878 -41983670 + pTR5 LTR ERV1 741 2438 0 599 201 30 4 chr18 44693989 44694160 -41983388 + MER31A LTR ERV1 256 435 -31 24 67 0 0 chr18 44694893 44694938 -41982610 + AT_rich Low_complexity Low_complexity 1 45 0 316 355 40 24 chr18 44696679 44696803 -41980745 - L3 LINE CR1 -1 1576 1451 382 343 144 26 chr18 44696836 44697510 -41980038 + L2 LINE L2 2556 3313 0 23 54 0 0 chr18 44697525 44697562 -41979986 + AT_rich Low_complexity Low_complexity 1 37 0 2410 41 3 32 chr18 44697921 44698236 -41979312 - AluY SINE Alu -5 306 1 718 314 79 83 chr18 44699190 44699885 -41977663 + L3 LINE CR1 421 1112 -465 265 342 42 17 chr18 44700341 44700461 -41977087 + MIR SINE MIR 31 153 -109 21 0 0 0 chr18 44700482 44700503 -41977045 + AT_rich Low_complexity Low_complexity 1 21 0 2296 112 0 3 chr18 44701677 44701991 -41975557 + AluSq SINE Alu 1 313 0 3528 220 75 9 chr18 44702492 44703472 -41974076 - Charlie1 DNA MER1_type -75 2686 1642 355 344 111 11 chr18 44704819 44704999 -41972549 - MIR3 SINE MIR -8 200 3 245 271 51 0 chr18 44706401 44706460 -41971088 + L3 LINE CR1 1511 1572 -5 38 39 0 0 chr18 44706920 44706972 -41970576 + AT_rich Low_complexity Low_complexity 1 52 0 516 281 33 17 chr18 44707435 44707747 -41969801 + MLT1I LTR MaLR 7 350 -59 23 54 0 0 chr18 44708789 44708826 -41968722 + AT_rich Low_complexity Low_complexity 1 37 0 4008 206 159 9 chr18 44709057 44710415 -41967133 + L1PBa LINE L1 24 1672 -5191 1675 108 8 4 chr18 44710519 44710787 -41966761 + L1PBa LINE L1 1953 2221 -4642 893 197 14 85 chr18 44711320 44711543 -41966005 + MER63A DNA MER1_type 1 207 -3 388 329 21 0 chr18 44711701 44711841 -41965707 + MIR3 SINE MIR 37 179 -29 469 273 155 6 chr18 44712114 44712275 -41965273 - MER5A DNA MER1_type -1 188 4 552 363 40 9 chr18 44712885 44713108 -41964440 + MIR SINE MIR 20 249 -13 180 0 0 0 chr18 44714672 44714692 -41962856 + (TTG)n Simple_repeat Simple_repeat 2 21 0 900 243 56 26 chr18 44715077 44715399 -41962149 + MER2 DNA MER2_type 5 336 -9 635 363 80 6 chr18 44715608 44715947 -41961601 + LTR33 LTR ERVL 5 368 -153 1639 194 126 11 chr18 44716040 44716422 -41961126 + MSTB LTR MaLR 1 426 0 906 155 19 84 chr18 44716677 44716890 -41960658 + MER20 DNA MER1_type 1 199 -20 326 339 9 9 chr18 44716963 44717075 -41960473 - L2 LINE L2 0 3272 3161 226 325 77 8 chr18 44718761 44718878 -41958670 + MIR3 SINE MIR 35 159 -49 279 54 0 0 chr18 44719972 44720009 -41957539 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr18 44720848 44720869 -41956679 + AT_rich Low_complexity Low_complexity 1 21 0 1176 213 50 26 chr18 44721008 44721388 -41956160 + LTR37A LTR ERV1 19 407 -19 471 263 9 0 chr18 44721439 44721553 -41955995 - MIR SINE MIR -96 166 52 245 227 13 0 chr18 44721611 44721686 -41955862 + L1ME LINE L1 3868 3943 -2203 314 326 108 48 chr18 44721739 44722073 -41955475 + L1ME LINE L1 4012 4365 -1781 573 290 29 51 chr18 44722825 44722973 -41954575 + L1ME LINE L1 5272 5422 -744 2535 55 3 0 chr18 44722973 44723283 -41954265 + AluY SINE Alu 1 311 0 573 290 29 51 chr18 44723283 44723487 -41954061 + L1ME LINE L1 5422 5613 -553 24 32 0 0 chr18 44725004 44725035 -41952513 + AT_rich Low_complexity Low_complexity 1 31 0 3227 158 27 31 chr18 44727783 44728020 -41949528 - L1MA4A LINE L1 -2 6301 6064 2143 122 0 3 chr18 44728020 44728323 -41949225 + AluSx SINE Alu 1 302 -10 3227 158 27 31 chr18 44728323 44728725 -41948823 - L1MA4A LINE L1 -239 6064 5665 198 194 0 0 chr18 44729010 44729046 -41948502 - L2 LINE L2 -12 3301 3266 276 77 0 0 chr18 44729070 44729109 -41948439 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 202 281 35 0 chr18 44729260 44729317 -41948231 - MIR SINE MIR -111 151 93 180 461 0 0 chr18 44729518 44729646 -41947902 + MIR3 SINE MIR 31 158 -50 225 94 0 0 chr18 44729797 44729829 -41947719 + (CA)n Simple_repeat Simple_repeat 2 33 0 24 32 0 0 chr18 44729872 44729903 -41947645 + AT_rich Low_complexity Low_complexity 1 31 0 529 271 70 10 chr18 44730399 44730558 -41946990 + L1MA9 LINE L1 6064 6239 -73 210 37 0 0 chr18 44730558 44730585 -41946963 + (CA)n Simple_repeat Simple_repeat 2 28 0 529 271 70 10 chr18 44730585 44730624 -41946924 + L1MA9 LINE L1 6239 6274 -38 27 29 0 0 chr18 44731035 44731069 -41946479 + AT_rich Low_complexity Low_complexity 1 34 0 310 247 93 10 chr18 44731190 44731287 -41946261 + MIR3 SINE MIR 97 201 -7 290 202 62 147 chr18 44732363 44732389 -41945159 - MER5C DNA MER1_type -200 124 97 2329 103 0 0 chr18 44732389 44732700 -41944848 - AluY SINE Alu 0 311 1 290 202 62 147 chr18 44732700 44732802 -41944746 - MER5C DNA MER1_type -227 97 7 195 215 51 89 chr18 44732898 44732977 -41944571 + MIR3 SINE MIR 2 77 -131 25 51 0 0 chr18 44733653 44733692 -41943856 + AT_rich Low_complexity Low_complexity 1 39 0 328 255 14 0 chr18 44733779 44733860 -41943688 - MIR SINE MIR -68 140 59 465 193 9 46 chr18 44734957 44734975 -41942573 - MER53 DNA DNA -82 107 90 2445 207 44 11 chr18 44734975 44735516 -41942032 + MER89 LTR ERV1 1 559 0 465 193 9 46 chr18 44735516 44735606 -41941942 - MER53 DNA DNA -99 90 3 2116 115 7 0 chr18 44735738 44736034 -41941514 - AluSp SINE Alu -15 298 1 262 357 33 37 chr18 44737027 44737268 -41940280 - L3 LINE CR1 -567 1010 771 845 162 0 7 chr18 44737871 44738007 -41939541 + Tigger4(Zombi) DNA MER2_type 1 135 -2596 212 371 29 0 chr18 44738081 44738186 -41939362 - MIR3 SINE MIR -3 205 98 219 343 71 0 chr18 44738257 44738327 -41939221 - L2 LINE L2 -10 3262 3188 2106 192 189 74 chr18 44739240 44740110 -41937438 - LTR28 LTR ERV1 0 1020 1 192 371 13 38 chr18 44740313 44740472 -41937076 - L2 LINE L2 -1017 2297 2143 206 197 16 16 chr18 44740606 44740667 -41936881 + (TA)n Simple_repeat Simple_repeat 1 61 0 581 260 103 86 chr18 44740712 44741601 -41935947 + L1M4 LINE L1 2600 3504 -2642 873 297 58 2 chr18 44741731 44742145 -41935403 + L1M4 LINE L1 3691 4127 -2019 247 289 53 9 chr18 44742143 44742257 -41935291 + L1ME3A LINE L1 6032 6150 -20 * 26 0 0 0 chr18 44742680 44742706 -41934842 + AT_rich Low_complexity Low_complexity 1 26 0 204 337 56 0 chr18 44742767 44742856 -41934692 - L3b LINE CR1 -307 1276 1183 361 315 67 13 chr18 44743197 44743346 -41934202 + LTR16A LTR ERVL 1 157 -293 356 320 90 31 chr18 44743709 44743931 -41933617 - MIR SINE MIR 0 262 28 553 256 101 40 chr18 44744236 44744435 -41933113 - MIR SINE MIR -50 212 2 518 310 93 14 chr18 44744605 44744821 -41932727 + MIR SINE MIR 30 262 0 473 314 18 30 chr18 44745044 44745213 -41932335 + MIR3 SINE MIR 35 201 -7 387 0 0 0 chr18 44745311 44745354 -41932194 + (TG)n Simple_repeat Simple_repeat 1 43 0 1878 121 40 3 chr18 44746811 44747108 -41930440 + AluSc SINE Alu 1 308 -1 1251 156 10 0 chr18 44748056 44748248 -41929300 - AluSq SINE Alu -119 194 1 190 317 73 24 chr18 44749227 44749309 -41928239 + L2 LINE L2 3196 3281 -32 1350 259 61 32 chr18 44749697 44750171 -41927377 + MER110 LTR ERV1 4 491 0 3537 154 38 14 chr18 44751066 44751704 -41925844 + MER39B LTR ERV1 1 653 0 2208 68 31 0 chr18 44751941 44752233 -41925315 - AluY SINE Alu -10 301 1 577 311 6 0 chr18 44752234 44752395 -41925153 + MER20 DNA MER1_type 58 219 0 2232 101 0 0 chr18 44753013 44753309 -41924239 + AluSx SINE Alu 1 296 -16 4153 220 14 20 chr18 44753645 44754869 -41922679 - L1MB7 LINE L1 -8 6674 5461 924 142 0 0 chr18 44754890 44755031 -41922517 - AluSg/x SINE Alu -18 292 152 1831 259 36 43 chr18 44755038 44755641 -41921907 - L1MB7 LINE L1 -5930 612 14 1812 159 59 25 chr18 44757195 44757553 -41919995 + THE1C LTR MaLR 1 370 -5 556 271 112 0 chr18 44762354 44762524 -41915024 - MER5A DNA MER1_type 0 189 1 1491 186 24 27 chr18 44762629 44762925 -41914623 + AluJo SINE Alu 5 299 -13 508 276 74 6 chr18 44762944 44763107 -41914441 + MER5B DNA MER1_type 5 178 0 21 0 0 0 chr18 44763443 44763464 -41914084 + AT_rich Low_complexity Low_complexity 1 21 0 204 299 0 81 chr18 44763522 44763609 -41913939 - MIR SINE MIR -117 145 66 217 215 46 31 chr18 44763643 44763708 -41913840 - L2 LINE L2 -5 3267 3202 318 345 76 15 chr18 44763939 44764136 -41913412 - L3 LINE CR1 -6 1571 1363 1854 162 44 0 chr18 44764223 44764544 -41913004 - MER1B DNA MER1_type 0 337 3 3001 207 33 10 chr18 44764672 44765286 -41912262 - MER73 LTR ERVL -1 643 16 1639 97 182 0 chr18 44765381 44765628 -41911920 - AluSc SINE Alu -17 292 1 239 240 0 0 chr18 44766481 44766531 -41911017 + L1MC4 LINE L1 6663 6712 -1330 392 288 33 39 chr18 44767283 44767436 -41910112 - MLT1K LTR MaLR -17 571 420 1753 229 76 25 chr18 44767632 44768121 -41909427 - MER119 DNA MER1_type -7 576 63 291 244 70 134 chr18 44770389 44770561 -41906987 + MIR SINE MIR 89 249 -13 283 300 27 45 chr18 44771217 44771327 -41906221 - MIR3 SINE MIR 0 208 101 24 32 0 0 chr18 44772438 44772469 -41905079 + AT_rich Low_complexity Low_complexity 1 31 0 245 300 0 0 chr18 44772640 44772730 -41904818 - L1MC4 LINE L1 -1339 6703 6614 231 287 23 0 chr18 44772654 44772741 -41904807 + L1MC4 LINE L1 6614 6702 -1340 * 1190 222 0 0 chr18 44772759 44772993 -41904555 + MER46B DNA MER2_type 1 109 -127 311 100 0 40 chr18 44772990 44773040 -41904508 + LTR56 LTR ERV1 347 394 -51 * 829 148 26 13 chr18 44773038 44773193 -41904355 + MER46B DNA MER2_type 80 236 0 236 170 19 0 chr18 44773199 44773252 -41904296 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 2335 160 28 28 chr18 44773253 44773685 -41903863 - Tigger2a DNA MER2_type -1 433 2 330 26 0 0 chr18 44773686 44773725 -41903823 + (TG)n Simple_repeat Simple_repeat 2 40 0 1688 289 108 21 chr18 44773747 44774649 -41902899 - HAL1 LINE L1 -73 2434 1455 843 318 108 46 chr18 44774731 44775446 -41902102 - HAL1 LINE L1 -1537 970 212 389 294 59 0 chr18 44775457 44775576 -41901972 - HAL1 LINE L1 -2378 129 4 2265 94 7 0 chr18 44775923 44776220 -41901328 - AluSp SINE Alu -10 303 5 205 363 100 26 chr18 44776484 44776674 -41900874 + L2 LINE L2 2658 2861 -453 226 363 187 21 chr18 44776720 44777009 -41900539 + L2 LINE L2 2936 3272 0 264 130 0 0 chr18 44778234 44778280 -41899268 + (TG)n Simple_repeat Simple_repeat 2 47 0 230 311 29 78 chr18 44779979 44780185 -41897363 + L2 LINE L2 1754 1949 -1365 2293 79 0 3 chr18 44780422 44780713 -41896835 + AluY SINE Alu 1 290 -21 23 0 0 0 chr18 44781818 44781841 -41895707 + AT_rich Low_complexity Low_complexity 1 23 0 4371 187 29 14 chr18 44782568 44783429 -41894119 + L1MC1 LINE L1 5443 6316 -17 206 95 24 0 chr18 44783439 44783481 -41894067 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1064 114 11 49 chr18 44783490 44783674 -41893874 - L1PA16 LINE L1 -524 5642 5466 2923 158 20 2 chr18 44783674 44784184 -41893364 + L1PA16 LINE L1 5638 6157 -9 21 0 0 0 chr18 44784512 44784533 -41893015 + AT_rich Low_complexity Low_complexity 1 21 0 215 359 145 0 chr18 44785187 44785332 -41892216 + MIR3 SINE MIR 36 201 -7 357 281 0 0 chr18 44785583 44785729 -41891819 + GA-rich Low_complexity Low_complexity 4 149 0 3197 176 37 14 chr18 44786554 44787198 -41890350 + L1MC1 LINE L1 5669 6327 -6 1206 94 12 0 chr18 44788200 44788360 -41889188 + AluSg/x SINE Alu 138 299 -13 1534 218 28 14 chr18 44788368 44788726 -41888822 - MLT1A1 LTR MaLR -2 363 1 24 0 0 0 chr18 44789823 44789847 -41887701 + AT_rich Low_complexity Low_complexity 1 24 0 268 180 0 0 chr18 44790976 44791026 -41886522 + L1ME4a LINE L1 5968 6017 -104 2118 99 3 0 chr18 44791114 44791396 -41886152 + AluSq SINE Alu 17 299 -14 183 322 44 22 chr18 44791429 44791519 -41886029 + L3 LINE CR1 568 659 -918 516 233 68 29 chr18 44792600 44792804 -41884744 + MER106B DNA MER1_type 1 1040 -19 1785 153 33 0 chr18 44793235 44793535 -41884013 + AluSx SINE Alu 1 310 -2 26 30 0 0 chr18 44793687 44793720 -41883828 + AT_rich Low_complexity Low_complexity 1 33 0 1310 271 44 35 chr18 44793727 44794272 -41883276 - L1MC4 LINE L1 -298 7744 7156 406 275 88 18 chr18 44794825 44794996 -41882552 - MER57B LTR ERV1 -248 186 4 31 26 0 0 chr18 44795105 44795143 -41882405 + AT_rich Low_complexity Low_complexity 1 38 0 5326 234 40 16 chr18 44795983 44797375 -41880173 + Charlie1a DNA MER1_type 1 1425 -30 31 96 0 0 chr18 44797617 44797711 -41879837 + AT_rich Low_complexity Low_complexity 1 94 0 26 74 0 0 chr18 44798016 44798070 -41879478 + AT_rich Low_complexity Low_complexity 1 54 0 321 333 57 71 chr18 44798239 44798575 -41878973 + L1ME LINE L1 2492 2822 -3324 287 345 85 25 chr18 44799879 44800338 -41877210 + L1ME LINE L1 5297 5790 -372 2262 103 0 0 chr18 44800587 44800887 -41876661 - AluSx SINE Alu -12 300 1 21 0 0 0 chr18 44801024 44801045 -41876503 + AT_rich Low_complexity Low_complexity 1 21 0 318 50 0 0 chr18 44801092 44801132 -41876416 + (TA)n Simple_repeat Simple_repeat 2 41 0 3023 223 62 39 chr18 44802587 44802783 -41874765 + L1MD2 LINE L1 983 1173 -5367 1528 181 46 4 chr18 44802783 44803064 -41874484 + AluJo SINE Alu 1 293 -19 3023 223 62 39 chr18 44803064 44803863 -41873685 + L1MD2 LINE L1 1173 2001 -4539 3693 120 18 23 chr18 44803863 44803889 -41873659 + L1PB2 LINE L1 5534 5559 -592 517 115 13 0 chr18 44803889 44803967 -41873581 + MADE1 DNA Mariner 2 80 0 3693 120 18 23 chr18 44803967 44804555 -41872993 + L1PB2 LINE L1 5559 6145 -6 393 194 32 0 chr18 44804658 44804751 -41872797 + L1PB2 LINE L1 6050 6145 -6 1382 219 125 33 chr18 44804845 44805451 -41872097 + L1MD2 LINE L1 1988 2649 -3891 2019 171 32 11 chr18 44805454 44805829 -41871719 + LTR1B LTR ERV1 1 383 -443 5409 242 95 60 chr18 44805830 44808660 -41868888 + L1MD2 LINE L1 2807 5737 -813 1971 159 52 2 chr18 44808671 44809073 -41868475 + L1MA8 LINE L1 5865 6286 -5 3457 237 89 9 chr18 44809086 44810041 -41867507 + L1MD2 LINE L1 5711 6741 -12 324 0 0 0 chr18 44810235 44810271 -41867277 + (CA)n Simple_repeat Simple_repeat 2 37 0 30 45 0 0 chr18 44810875 44810919 -41866629 + AT_rich Low_complexity Low_complexity 1 44 0 304 189 28 19 chr18 44810925 44811031 -41866517 + (TA)n Simple_repeat Simple_repeat 2 108 0 769 230 11 31 chr18 44811150 44811341 -41866207 - MER5A DNA MER1_type 0 189 3 196 195 0 73 chr18 44811729 44811770 -41865778 - L2 LINE L2 -688 2626 2589 * 269 314 48 8 chr18 44811764 44811888 -41865660 - MIR SINE MIR 0 262 134 608 316 100 0 chr18 44811888 44812138 -41865410 - LTR16A LTR ERVL -22 428 154 404 318 170 36 chr18 44812586 44813058 -41864490 + L2 LINE L2 2572 3139 -174 210 261 0 0 chr18 44813068 44813114 -41864434 + (TATG)n Simple_repeat Simple_repeat 3 48 0 223 299 47 47 chr18 44813174 44813281 -41864267 + L2 LINE L2 3168 3274 -39 23 0 0 0 chr18 44813452 44813475 -41864073 + AT_rich Low_complexity Low_complexity 1 23 0 2156 116 0 0 chr18 44814517 44814811 -41862737 + AluSx SINE Alu 1 294 -18 562 292 55 10 chr18 44815367 44815569 -41861979 + MIR SINE MIR 29 239 -23 715 280 83 34 chr18 44818012 44818412 -41859136 - MLT1H1 LTR MaLR 0 555 158 236 306 27 27 chr18 44820093 44820204 -41857344 - MIR SINE MIR -64 144 34 532 337 40 34 chr18 44820943 44821421 -41856127 - L1MC4a LINE L1 -1940 5868 5388 363 312 83 16 chr18 44821950 44822143 -41855405 + MIR SINE MIR 16 215 -47 321 26 0 0 chr18 44822454 44822492 -41855056 + (TG)n Simple_repeat Simple_repeat 2 39 0 257 136 23 0 chr18 44824017 44824061 -41853487 - L2 LINE L2 -4 3309 3265 237 33 0 0 chr18 44824115 44824145 -41853403 + (TA)n Simple_repeat Simple_repeat 2 31 0 852 250 0 0 chr18 44824688 44824864 -41852684 - MER45A DNA AcHobo 0 178 3 202 246 60 98 chr18 44825217 44825400 -41852148 - L2 LINE L2 -537 2777 2602 252 0 0 0 chr18 44825625 44825653 -41851895 + (TTAAA)n Simple_repeat Simple_repeat 4 31 0 188 283 150 0 chr18 44825778 44825838 -41851710 - L2 LINE L2 -989 2325 2257 182 317 42 25 chr18 44827473 44827593 -41849955 + L2 LINE L2 2725 2846 -468 202 264 125 28 chr18 44827714 44827786 -41849762 - MIR3 SINE MIR -29 179 101 2090 125 10 98 chr18 44828486 44828818 -41848730 + THE1C LTR MaLR 1 292 -83 2336 97 3 0 chr18 44828818 44829127 -41848421 + AluSg SINE Alu 1 310 0 2090 125 10 98 chr18 44829127 44829202 -41848346 + THE1C LTR MaLR 292 372 -3 21 36 0 0 chr18 44829432 44829460 -41848088 + AT_rich Low_complexity Low_complexity 1 28 0 185 349 58 0 chr18 44830619 44830705 -41846843 + L2 LINE L2 3185 3275 -38 2822 177 32 12 chr18 44830720 44831307 -41846241 - MER51C LTR ERV1 0 640 1 2153 114 3 0 chr18 44831809 44832106 -41845442 + AluSq SINE Alu 1 298 -15 247 314 24 30 chr18 44832134 44832275 -41845273 + MIR SINE MIR 71 212 -50 1562 177 0 37 chr18 44833829 44834128 -41843420 - AluJo SINE Alu -24 288 1 510 251 177 11 chr18 44834276 44834451 -41843097 + MIR SINE MIR 13 216 -46 21 0 0 0 chr18 44835400 44835421 -41842127 + GC_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr18 44835424 44835445 -41842103 + (T)n Simple_repeat Simple_repeat 1 21 0 1088 76 0 0 chr18 44835445 44835577 -41841971 - AluY SINE Alu -179 132 1 24 0 0 0 chr18 44835664 44835688 -41841860 + AT_rich Low_complexity Low_complexity 1 24 0 28 61 0 0 chr18 44835728 44835777 -41841771 + AT_rich Low_complexity Low_complexity 1 49 0 387 333 70 6 chr18 44837317 44837473 -41840075 - MIR3 SINE MIR -9 199 34 29 47 0 0 chr18 44837681 44837724 -41839824 + AT_rich Low_complexity Low_complexity 1 43 0 182 279 0 33 chr18 44837997 44838058 -41839490 + MIR SINE MIR 80 138 -124 332 382 87 24 chr18 44838073 44838327 -41839221 + L3 LINE CR1 1307 1576 -1 277 220 40 60 chr18 44838367 44838467 -41839081 + LTR48B LTR ERV1 4 101 -543 * 1238 213 21 80 chr18 44838440 44838846 -41838702 + MER39 LTR ERV1 176 690 -17 187 283 0 98 chr18 44838920 44839012 -41838536 + MIR SINE MIR 102 184 -78 264 192 13 77 chr18 44839463 44839541 -41838007 - MLT1H LTR MaLR -16 533 461 301 310 89 35 chr18 44839919 44840122 -41837426 - L3 LINE CR1 -113 1464 1251 22 0 0 0 chr18 44840557 44840579 -41836969 + AT_rich Low_complexity Low_complexity 1 22 0 311 255 111 70 chr18 44840913 44841156 -41836392 - L1M4 LINE L1 -3764 2270 2018 226 306 38 75 chr18 44841525 44841685 -41835863 - L3 LINE CR1 -814 763 610 31 26 0 0 chr18 44841696 44841734 -41835814 + AT_rich Low_complexity Low_complexity 1 38 0 1870 235 67 2 chr18 44842357 44842877 -41834671 + L1 LINE L1 4036 4589 -1557 1397 129 13 9 chr18 44842874 44843107 -41834441 - L1P4 LINE L1 -537 5628 5395 * 1265 171 0 18 chr18 44843107 44843335 -41834213 - L1P4 LINE L1 -2198 3948 3725 1509 226 80 45 chr18 44843347 44843745 -41833803 - L1M4 LINE L1 -5533 422 11 1026 237 7 3 chr18 44843759 44844046 -41833502 - L1M4 LINE L1 -3095 3051 2764 208 152 43 22 chr18 44844121 44844167 -41833381 + GA-rich Low_complexity Low_complexity 2 48 0 532 310 19 6 chr18 44844335 44844493 -41833055 + MIR SINE MIR 32 191 -71 656 372 88 7 chr18 44844634 44845056 -41832492 - L2 LINE L2 -609 2705 2250 191 403 0 15 chr18 44845517 44845584 -41831964 - L2 LINE L2 -84 3188 3123 207 333 0 44 chr18 44846745 44846835 -41830713 + MIR SINE MIR 127 212 -50 1317 72 0 0 chr18 44848358 44848525 -41829023 + AluY SINE Alu 119 285 -26 21 57 0 0 chr18 44849388 44849423 -41828125 + AT_rich Low_complexity Low_complexity 1 35 0 492 287 31 16 chr18 44849785 44849953 -41827595 - MIR3 SINE MIR -9 199 29 306 0 0 0 chr18 44850163 44850197 -41827351 + (A)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr18 44850228 44850257 -41827291 + (T)n Simple_repeat Simple_repeat 1 29 0 301 148 40 10 chr18 44850481 44850582 -41826966 + (TA)n Simple_repeat Simple_repeat 1 104 0 240 250 16 0 chr18 44850613 44850677 -41826871 + (TA)n Simple_repeat Simple_repeat 2 66 0 229 213 0 82 chr18 44850798 44850859 -41826689 + L2 LINE L2 3257 3312 -1 305 321 80 3 chr18 44850958 44851074 -41826474 - MIR SINE MIR -68 140 30 455 263 66 7 chr18 44852051 44852188 -41825360 - MIR SINE MIR -61 201 57 1869 223 142 2 chr18 44852725 44853170 -41824378 + MER6 DNA MER2_type 1 507 -358 683 140 0 0 chr18 44853170 44853270 -41824278 - LTR12 LTR ERV1 0 714 615 255 284 26 0 chr18 44853273 44853389 -41824159 - LTR30 LTR ERV1 -80 642 524 1284 150 17 21 chr18 44853454 44853688 -41823860 - LTR12 LTR ERV1 -481 233 1 1839 149 25 25 chr18 44853688 44854050 -41823498 + MER6 DNA MER2_type 504 865 0 1121 328 52 9 chr18 44854066 44854523 -41823025 + L2 LINE L2 2447 2923 -391 495 264 28 56 chr18 44854521 44854737 -41822811 + L2 LINE L2 3102 3311 -2 * 25 110 0 0 chr18 44855306 44855415 -41822133 + AT_rich Low_complexity Low_complexity 1 109 0 406 253 0 0 chr18 44856497 44856576 -41820972 - MER5A DNA MER1_type -107 82 4 23 33 0 0 chr18 44856733 44856763 -41820785 + AT_rich Low_complexity Low_complexity 1 30 0 332 232 80 18 chr18 44858843 44858955 -41818593 - MER94 DNA DNA -15 119 1 2453 146 52 9 chr18 44859514 44859940 -41817608 - MER65A LTR ERV1 -1 444 1 5436 150 11 25 chr18 44860396 44861841 -41815707 + L1PA16 LINE L1 4740 6166 0 3280 188 52 36 chr18 44861836 44862057 -41815491 + L1MA10 LINE L1 5593 5809 -525 * 2565 118 6 3 chr18 44862057 44862420 -41815128 - THE1B LTR MaLR 0 364 1 3280 188 52 36 chr18 44862420 44862927 -41814621 + L1MA10 LINE L1 5809 6333 -1 2093 115 14 0 chr18 44864342 44864637 -41812911 + AluSq SINE Alu 5 303 -10 343 94 0 0 chr18 44864649 44864702 -41812846 - MADE1 DNA Mariner 0 80 28 23 0 0 0 chr18 44864904 44864927 -41812621 + AT_rich Low_complexity Low_complexity 1 23 0 258 250 28 28 chr18 44865854 44865926 -41811622 - MER5B DNA MER1_type -59 119 48 971 195 83 64 chr18 44865940 44866253 -41811295 - L1MB7 LINE L1 -16 6168 5850 263 197 0 49 chr18 44866256 44866317 -41811231 - MER5B DNA MER1_type -118 60 3 1954 124 0 0 chr18 44867765 44868030 -41809518 + AluSx SINE Alu 22 286 -26 240 86 0 0 chr18 44868030 44868065 -41809483 + (TTAA)n Simple_repeat Simple_repeat 4 38 0 21 0 0 0 chr18 44868849 44868870 -41808678 + AT_rich Low_complexity Low_complexity 1 21 0 268 347 126 0 chr18 44868946 44869145 -41808403 + L2 LINE L2 2507 2730 -584 215 372 83 16 chr18 44869319 44869440 -41808108 + L2 LINE L2 3134 3262 -10 2267 104 0 16 chr18 44870541 44870857 -41806691 - AluSx SINE Alu -1 311 1 23 33 0 0 chr18 44872568 44872598 -41804950 + AT_rich Low_complexity Low_complexity 1 30 0 1838 165 0 10 chr18 44873853 44874144 -41803404 + AluSx SINE Alu 1 288 -24 2047 125 0 3 chr18 44874152 44874439 -41803109 + AluSg SINE Alu 1 286 -24 26 0 0 0 chr18 44874439 44874465 -41803083 + AT_rich Low_complexity Low_complexity 1 26 0 180 0 0 0 chr18 44874472 44874492 -41803056 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 1617 151 130 54 chr18 44874492 44875018 -41802530 + MER4A LTR ERV1 15 447 -18 193 333 59 59 chr18 44875443 44875578 -41801970 - MIR3 SINE MIR -7 201 67 23 33 0 0 chr18 44875895 44875925 -41801623 + AT_rich Low_complexity Low_complexity 1 30 0 297 0 0 0 chr18 44875954 44875987 -41801561 + (T)n Simple_repeat Simple_repeat 1 33 0 26 50 0 0 chr18 44926332 44926372 -41751176 + AT_rich Low_complexity Low_complexity 1 40 0 24 0 0 0 chr18 44926434 44926458 -41751090 + AT_rich Low_complexity Low_complexity 1 24 0 198 0 0 0 chr18 44927549 44927571 -41749977 + (TC)n Simple_repeat Simple_repeat 1 22 0 225 282 136 9 chr18 44928427 44928537 -41749011 + L2 LINE L2 3179 3302 -11 848 268 61 0 chr18 44928563 44928776 -41748772 + MIR SINE MIR 15 240 -22 960 244 53 0 chr18 44928867 44929129 -41748419 - L1M4 LINE L1 -750 5396 5121 273 361 33 28 chr18 44929182 44929395 -41748153 + L2 LINE L2 2156 2369 -945 1458 182 61 79 chr18 44931207 44931507 -41746041 - LTR54B LTR ERV1 -1 497 208 207 0 0 0 chr18 44931507 44931530 -41746018 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1458 182 61 79 chr18 44931530 44931735 -41745813 - LTR54B LTR ERV1 -290 208 1 282 236 0 0 chr18 44931735 44931790 -41745758 + L2 LINE L2 3259 3313 0 180 364 154 14 chr18 44933718 44933861 -41743687 - L3 LINE CR1 -3 1574 1412 232 343 126 35 chr18 44933873 44934071 -41743477 + MIR SINE MIR 11 226 -36 1145 124 55 5 chr18 44934114 44934417 -41743131 + AluSq SINE Alu 103 415 0 1812 167 13 10 chr18 44935327 44935638 -41741910 + AluSx SINE Alu 1 312 0 267 368 47 5 chr18 44935644 44935834 -41741714 - L2 LINE L2 -974 2340 2143 1803 179 10 10 chr18 44935921 44936233 -41741315 - AluJo SINE Alu 0 312 1 23 0 0 0 chr18 44936871 44936894 -41740654 + AT_rich Low_complexity Low_complexity 1 23 0 237 328 172 12 chr18 44939311 44939567 -41737981 - L3 LINE CR1 -27 1550 1254 201 364 132 8 chr18 44940598 44940719 -41736829 - L3 LINE CR1 -7 1570 1435 437 378 82 20 chr18 44940987 44941339 -41736209 - L3 LINE CR1 -207 1370 997 4895 69 2 0 chr18 44943652 44944279 -41733269 + L1PA7 LINE L1 5340 5967 -187 5282 51 3 0 chr18 44944379 44945029 -41732519 + L1PA7 LINE L1 5500 6151 -3 23 24 0 24 chr18 44945183 44945203 -41732345 + AT_rich Low_complexity Low_complexity 1 20 -20 1964 92 4 0 chr18 44945203 44945463 -41732085 + AluY SINE Alu 42 302 -9 23 24 0 24 chr18 44945463 44945483 -41732065 + AT_rich Low_complexity Low_complexity 20 40 0 221 372 22 49 chr18 44945769 44945952 -41731596 - MIR3 SINE MIR 0 208 31 2660 93 0 0 chr18 44946027 44946382 -41731166 + THE1A LTR MaLR 1 355 0 2012 148 7 0 chr18 44946755 44947053 -41730495 + AluSg SINE Alu 3 302 -8 285 281 66 8 chr18 44947899 44948020 -41729528 - MIR SINE MIR -71 191 64 210 71 0 0 chr18 44949811 44949839 -41727709 + (GGA)n Simple_repeat Simple_repeat 3 30 0 1905 137 133 3 chr18 44949855 44950177 -41727371 + THE1B LTR MaLR 1 364 0 917 317 161 16 chr18 44951143 44951783 -41725765 + L3 LINE CR1 773 1505 -72 5789 102 126 71 chr18 44951815 44953308 -41724240 + pTR5 LTR ERV1 589 2437 -1 25 0 0 0 chr18 44955325 44955350 -41722198 + AT_rich Low_complexity Low_complexity 1 25 0 680 198 8 0 chr18 44955635 44955761 -41721787 + FLAM_C SINE Alu 2 128 -5 611 293 40 5 chr18 44955919 44956117 -41721431 - MIR SINE MIR -2 260 56 366 264 11 0 chr18 44956895 44956986 -41720562 - AluS SINE Alu -211 92 1 31 58 0 0 chr18 44957458 44957510 -41720038 + AT_rich Low_complexity Low_complexity 1 52 0 428 297 104 39 chr18 44957673 44958065 -41719483 - LTR33 LTR ERVL 0 521 76 479 210 90 0 chr18 44958287 44958387 -41719161 + FLAM_A SINE Alu 1 109 -33 276 30 0 0 chr18 44958390 44958423 -41719125 + (CAAT)n Simple_repeat Simple_repeat 4 36 0 836 117 0 0 chr18 44958715 44958835 -41718713 - AluY SINE Alu 0 311 192 197 186 70 0 chr18 44959558 44959601 -41717947 + L2 LINE L2 3268 3313 0 362 327 10 0 chr18 44959696 44959797 -41717751 - L2 LINE L2 -8 3264 3163 26 0 0 0 chr18 44960177 44960203 -41717345 + AT_rich Low_complexity Low_complexity 1 26 0 1652 183 3 20 chr18 44960270 44960570 -41716978 + AluJo SINE Alu 1 295 -17 186 342 53 0 chr18 44961287 44961363 -41716185 - L2 LINE L2 0 3313 3234 278 286 0 0 chr18 44962724 44962801 -41714747 + A-rich Low_complexity Low_complexity 1 77 0 802 304 0 0 chr18 44963287 44963507 -41714041 - MER58A DNA MER1_type -4 220 1 551 189 153 120 chr18 44963520 44963853 -41713695 - LTR16A1 LTR ERVL 0 457 114 1042 159 12 0 chr18 44963949 44964119 -41713429 + AluJb SINE Alu 135 306 -6 279 279 62 45 chr18 44964194 44964373 -41713175 - MLT1H LTR MaLR -249 300 119 740 291 181 22 chr18 44964473 44964882 -41712666 + L2 LINE L2 2831 3304 -9 325 228 62 63 chr18 44965174 44965201 -41712347 + HAL1b LINE L1 1204 1230 -118 252 0 0 0 chr18 44965201 44965229 -41712319 + (CA)n Simple_repeat Simple_repeat 2 29 0 325 228 62 63 chr18 44965229 44965345 -41712203 + HAL1b LINE L1 1230 1318 -30 197 280 187 0 chr18 44966233 44966308 -41711240 + MIR SINE MIR 164 252 -10 24 32 0 0 chr18 44967331 44967362 -41710186 + AT_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr18 44967582 44967618 -41709930 + AT_rich Low_complexity Low_complexity 1 36 0 1553 233 34 22 chr18 44968502 44968909 -41708639 + MER92A LTR ERV1 1 412 0 26 30 0 0 chr18 44970082 44970115 -41707433 + AT_rich Low_complexity Low_complexity 1 33 0 401 337 83 0 chr18 44970541 44970695 -41706853 + MIR SINE MIR 35 200 -62 851 249 96 79 chr18 44971107 44971384 -41706164 - MLT1G1 LTR MaLR -183 412 124 213 39 0 0 chr18 44971384 44971410 -41706138 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 851 249 96 79 chr18 44971410 44971537 -41706011 - MLT1G1 LTR MaLR -471 124 1 216 0 0 0 chr18 44972005 44972029 -41705519 + (A)n Simple_repeat Simple_repeat 1 24 0 229 139 0 0 chr18 44972042 44972078 -41705470 + MER63 DNA MER1_type 677 712 -349 267 349 0 0 chr18 44972093 44972176 -41705372 + MER63 DNA MER1_type 979 1061 -1 234 311 23 45 chr18 44972280 44972412 -41705136 - MLT1H LTR MaLR -375 174 46 23 0 0 0 chr18 44974047 44974070 -41703478 + AT_rich Low_complexity Low_complexity 1 23 0 337 268 54 36 chr18 44974139 44974251 -41703297 + L1ME LINE L1 3 116 -5954 341 239 22 0 chr18 44974616 44974708 -41702840 + L1M4 LINE L1 4737 4830 -1316 974 192 39 24 chr18 44974879 44975087 -41702461 - MER21B LTR ERV1 -17 846 636 1901 170 59 0 chr18 44975091 44975415 -41702133 + MER61A LTR ERV1 1 343 0 21523 126 23 29 chr18 44975415 44976773 -41700775 + MER61A-int LTR ERV1 1 1365 -3852 2123 138 48 20 chr18 44976773 44977127 -41700421 - THE1B LTR MaLR 0 364 1 21523 126 23 29 chr18 44977127 44980153 -41697395 + MER61A-int LTR ERV1 1365 5209 -8 249 57 0 0 chr18 44980155 44980190 -41697358 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1590 135 0 9 chr18 44980193 44980422 -41697126 - AluSx SINE Alu -32 280 54 14186 110 34 14 chr18 44980424 44983524 -41694024 + MER61A-int LTR ERV1 1970 5210 -7 953 237 217 4 chr18 44983531 44983784 -41693764 + MER61A LTR ERV1 1 307 -36 476 192 0 75 chr18 44983788 44983908 -41693640 + MER61A-int LTR ERV1 5960 6070 -688 1606 181 105 3 chr18 44983913 44984245 -41693303 + LTR47A LTR ERVL 1 366 -86 343 294 115 36 chr18 44984261 44984836 -41692712 + L1M4 LINE L1 2387 3006 -3140 354 231 91 65 chr18 44984844 44985030 -41692518 + L1M4 LINE L1 4298 4488 -1658 2395 71 3 0 chr18 44985098 44985394 -41692154 - AluY SINE Alu -14 297 1 3450 156 80 27 chr18 44985454 44986129 -41691419 + MER50 LTR ERV1 1 711 -23 401 291 74 40 chr18 44986280 44986606 -41690942 + L1M4 LINE L1 4826 5162 -984 483 296 39 89 chr18 44986640 44987080 -41690468 + L1M4 LINE L1 3863 4280 -1866 320 304 35 0 chr18 44988111 44988226 -41689322 - L2 LINE L2 -6 3307 3189 22 35 0 0 chr18 44988407 44988436 -41689112 + AT_rich Low_complexity Low_complexity 1 29 0 2273 29 0 11 chr18 44988476 44988780 -41688768 - L1PA3 LINE L1 0 6155 5878 369 0 0 0 chr18 44989211 44989252 -41688296 + (TG)n Simple_repeat Simple_repeat 2 42 0 2205 219 63 43 chr18 44989369 44990046 -41687502 - LTR8 LTR ERV1 0 691 1 5774 159 15 22 chr18 44990925 44992498 -41685050 + L1MA4 LINE L1 4730 6294 -6 391 267 33 25 chr18 44992823 44992943 -41684605 + MER94 DNA DNA 12 132 -2 224 389 7 27 chr18 44994188 44994337 -41683211 - L3 LINE CR1 -110 1467 1322 332 167 0 0 chr18 44994339 44994393 -41683155 + MLT1J1 LTR MaLR 52 105 -521 1092 207 96 40 chr18 44994451 44994702 -41682846 + MLT1E2 LTR MaLR 360 624 -2 397 161 203 59 chr18 44994768 44994886 -41682662 + MSTB1 LTR MaLR 1 135 -297 429 198 10 21 chr18 44994886 44994982 -41682566 + MSTB1 LTR MaLR 338 432 0 1176 165 116 60 chr18 44995026 44995313 -41682235 - AluJo SINE Alu 0 302 1 24 0 0 0 chr18 44995516 44995540 -41682008 + AT_rich Low_complexity Low_complexity 1 24 0 398 235 39 29 chr18 44996547 44996649 -41680899 + MLT1J1 LTR MaLR 81 183 -263 190 254 68 0 chr18 44997566 44997625 -41679923 + MIR3 SINE MIR 118 180 -28 493 290 175 9 chr18 44997944 44998161 -41679387 - MIR SINE MIR -8 254 2 26 30 0 0 chr18 44999065 44999098 -41678450 + AT_rich Low_complexity Low_complexity 1 33 0 296 198 0 12 chr18 44999421 44999502 -41678046 + (TA)n Simple_repeat Simple_repeat 1 80 0 222 118 0 0 chr18 45000291 45000325 -41677223 + (CA)n Simple_repeat Simple_repeat 2 35 0 187 284 0 30 chr18 45000479 45000546 -41677002 + L3 LINE CR1 1512 1576 -1 * 242 371 53 49 chr18 45000506 45000751 -41676797 + L2 LINE L2 2386 2631 -683 24 67 0 0 chr18 45000893 45000938 -41676610 + AT_rich Low_complexity Low_complexity 1 45 0 268 331 63 0 chr18 45001548 45001695 -41675853 + MIR SINE MIR 46 212 -50 180 313 31 31 chr18 45002041 45002105 -41675443 - MIR SINE MIR -6 256 193 2319 68 0 16 chr18 45002647 45002955 -41674593 - AluY SINE Alu -8 303 1 219 263 0 0 chr18 45004497 45004554 -41672994 + (TTA)n Simple_repeat Simple_repeat 2 58 0 298 77 22 0 chr18 45005309 45005353 -41672195 - MLT2A2 LTR ERVL 0 453 397 189 0 0 0 chr18 45005353 45005374 -41672174 + (TG)n Simple_repeat Simple_repeat 2 22 0 315 181 0 0 chr18 45005402 45005474 -41672074 + (CA)n Simple_repeat Simple_repeat 2 73 0 310 252 64 1 chr18 45005704 45005826 -41671722 - LTR39 LTR ERV1 -239 664 401 330 89 0 0 chr18 45005874 45005919 -41671629 - MER49 LTR ERV1 -638 285 241 2203 164 45 20 chr18 45005938 45006413 -41671135 - MLT2A2 LTR ERVL -40 510 1 1229 264 23 17 chr18 45007086 45007431 -41670117 - MER4D LTR ERV1 -8 895 549 1734 146 14 4 chr18 45007479 45007759 -41669789 - MER49 LTR ERV1 -638 285 3 37 52 0 0 chr18 45008004 45008062 -41669486 + AT_rich Low_complexity Low_complexity 1 58 0 203 257 0 29 chr18 45008079 45008149 -41669399 + GA-rich Low_complexity Low_complexity 1 68 0 412 71 14 14 chr18 45008226 45008296 -41669252 + (TA)n Simple_repeat Simple_repeat 1 70 0 21 89 0 0 chr18 45008314 45008370 -41669178 + AT_rich Low_complexity Low_complexity 1 56 0 232 284 134 17 chr18 45009319 45009558 -41667990 - L1ME LINE L1 -226 5895 5629 551 155 0 4 chr18 45009978 45010198 -41667350 - AluJb SINE Alu -7 305 2 783 235 83 18 chr18 45010199 45010416 -41667132 + MLT1A2 LTR MaLR 140 370 -4 302 276 51 10 chr18 45010739 45010837 -41666711 - L1MC4 LINE L1 -1317 6725 6624 * 312 275 0 0 chr18 45010758 45010838 -41666710 + L1MC4 LINE L1 6613 6692 -1350 202 277 27 45 chr18 45011648 45011760 -41665788 + L2 LINE L2 3099 3208 -105 278 362 49 13 chr18 45011899 45012123 -41665425 - MARNA DNA Mariner -313 273 42 228 163 0 0 chr18 45013257 45013300 -41664248 + (TG)n Simple_repeat Simple_repeat 1 43 0 217 184 0 41 chr18 45014065 45014114 -41663434 - MIR3 SINE MIR -2 206 160 266 262 106 28 chr18 45014512 45014653 -41662895 - MLT1I LTR MaLR -257 152 1 22 0 0 0 chr18 45014757 45014779 -41662769 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr18 45015015 45015036 -41662512 + AT_rich Low_complexity Low_complexity 1 21 0 3465 158 39 16 chr18 45015090 45015760 -41661788 - Tigger3(Golem) DNA MER2_type -2 3027 2343 261 0 0 0 chr18 45015760 45015789 -41661759 + (T)n Simple_repeat Simple_repeat 1 29 0 3531 213 76 43 chr18 45016487 45017555 -41659993 - Tigger3b DNA MER2_type -126 1105 3 282 338 71 0 chr18 45017975 45018200 -41659348 - L1M4 LINE L1 -2203 3943 3703 1611 51 0 0 chr18 45018424 45018620 -41658928 - L1PA3 LINE L1 -3 6152 5957 180 77 0 0 chr18 45019223 45019249 -41658299 + (TTTTTA)n Simple_repeat Simple_repeat 5 30 0 2219 250 62 45 chr18 45019359 45020704 -41656844 - L1ME2 LINE L1 0 6233 4800 528 239 86 37 chr18 45020753 45021079 -41656469 - L1ME2 LINE L1 -5197 1008 667 4127 30 4 0 chr18 45021127 45021623 -41655925 - L1PA3 LINE L1 0 6155 5658 2087 99 20 7 chr18 45021723 45022027 -41655521 - AluSp SINE Alu -5 308 1 281 317 66 48 chr18 45022279 45022550 -41654998 - L1ME2 LINE L1 -5953 443 168 266 339 70 9 chr18 45022575 45022690 -41654858 + MIR3 SINE MIR 85 206 -2 22 0 0 0 chr18 45022895 45022917 -41654631 + AT_rich Low_complexity Low_complexity 1 22 0 208 83 42 42 chr18 45023230 45023278 -41654270 + A-rich Low_complexity Low_complexity 2 49 0 1188 194 88 67 chr18 45023908 45024237 -41653311 + MER2 DNA MER2_type 2 337 -8 4515 228 57 9 chr18 45024264 45025744 -41651804 + L1MC1 LINE L1 4783 6333 0 246 338 0 70 chr18 45025839 45025996 -41651552 + L3 LINE CR1 919 1064 -513 28 0 0 0 chr18 45026473 45026501 -41651047 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr18 45027437 45027458 -41650090 + AT_rich Low_complexity Low_complexity 1 21 0 2091 101 14 3 chr18 45027794 45028091 -41649457 + AluSx SINE Alu 3 302 -10 28 29 0 0 chr18 45028960 45028995 -41648553 + AT_rich Low_complexity Low_complexity 1 35 0 232 406 14 21 chr18 45030870 45031013 -41646535 + MIR3 SINE MIR 42 183 -25 2278 113 0 0 chr18 45031140 45031442 -41646106 - AluY SINE Alu -8 303 2 1131 156 5 0 chr18 45031941 45032140 -41645408 - AluY SINE Alu -110 201 2 360 278 30 23 chr18 45032522 45032655 -41644893 - L2 LINE L2 -245 3068 2935 1504 175 4 4 chr18 45032718 45032970 -41644578 + AluJb SINE Alu 38 289 -23 476 310 131 61 chr18 45033136 45033594 -41643954 - MLT1K LTR MaLR -13 575 86 2110 174 66 15 chr18 45034188 45034595 -41642953 - MSTC LTR MaLR 0 428 1 3913 264 44 58 chr18 45034595 45036269 -41641279 - MSTC-int LTR MaLR -1 1650 1 769 191 15 0 chr18 45036269 45036405 -41641143 - MSTC LTR MaLR 0 428 291 1772 170 0 29 chr18 45036405 45036717 -41640831 - AluJo SINE Alu -7 305 3 2060 102 0 27 chr18 45036739 45037032 -41640516 - AluY SINE Alu -26 285 1 2445 71 0 0 chr18 45037041 45037350 -41640198 - AluY SINE Alu -2 309 1 966 237 16 82 chr18 45037350 45037666 -41639882 - AluJb SINE Alu -6 296 2 602 225 20 111 chr18 45037350 45037593 -41639955 - AluJo SINE Alu -16 296 75 1222 167 131 29 chr18 45037666 45037941 -41639607 - MSTC LTR MaLR -125 303 1 186 321 28 53 chr18 45038474 45038549 -41638999 + MIR SINE MIR 45 116 -102 5621 170 23 21 chr18 45038771 45040625 -41636923 - L1PB1 LINE L1 -8 6143 4291 2166 115 7 0 chr18 45040625 45040930 -41636618 - AluSp SINE Alu -6 307 1 5621 170 23 21 chr18 45040930 45041142 -41636406 - L1PB1 LINE L1 -1860 4291 4081 3611 199 8 0 chr18 45041145 45041854 -41635694 + L1 LINE L1 3510 4224 -1922 1975 149 0 3 chr18 45042456 45042751 -41634797 - AluSq SINE Alu -17 296 3 195 42 0 0 chr18 45043612 45043636 -41633912 + (TG)n Simple_repeat Simple_repeat 2 25 0 201 147 0 0 chr18 45044327 45044361 -41633187 + (TTTTG)n Simple_repeat Simple_repeat 3 36 0 597 76 0 0 chr18 45044882 45044961 -41632587 + MADE1 DNA Mariner 1 79 -1 2049 149 8 28 chr18 45045493 45045855 -41631693 + THE1A LTR MaLR 1 355 0 23 33 0 0 chr18 45045978 45046008 -41631540 + AT_rich Low_complexity Low_complexity 1 30 0 286 329 33 66 chr18 45046068 45046220 -41631328 + MER5A DNA MER1_type 43 189 0 261 260 21 21 chr18 45046993 45047089 -41630459 - L1P LINE L1 -992 5154 5059 3382 140 21 5 chr18 45047090 45047308 -41630240 + L1PB1 LINE L1 5566 5779 -372 423 0 0 0 chr18 45047308 45047355 -41630193 + (TA)n Simple_repeat Simple_repeat 1 47 0 3382 140 21 5 chr18 45047355 45047713 -41629835 + L1PB1 LINE L1 5779 6151 0 189 302 122 36 chr18 45047797 45047936 -41629612 - L3 LINE CR1 -307 1270 1120 22 35 0 0 chr18 45048352 45048381 -41629167 + AT_rich Low_complexity Low_complexity 1 29 0 200 33 0 33 chr18 45048629 45048659 -41628889 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 6224 145 28 14 chr18 45048664 45049786 -41627762 - L1MA2 LINE L1 0 7723 6618 274 45 45 0 chr18 45049786 45049830 -41627718 + (TTTG)n Simple_repeat Simple_repeat 4 49 0 1606 184 0 21 chr18 45049830 45050112 -41627436 - AluJo SINE Alu -34 278 3 6224 145 28 14 chr18 45050112 45050490 -41627058 - L1MA2 LINE L1 -1104 6619 6202 272 195 88 0 chr18 45050481 45050594 -41626954 - L1MA2 LINE L1 -2947 4618 4496 * 18038 180 53 12 chr18 45050587 45054012 -41623536 - L1MA2 LINE L1 -3986 3579 13 444 123 0 0 chr18 45054467 45054540 -41623008 + (CA)n Simple_repeat Simple_repeat 2 74 0 338 229 2 13 chr18 45054776 45054885 -41622663 - L1MDb LINE L1 -5064 1006 897 * 487 208 0 8 chr18 45054884 45055003 -41622545 - L1MA9 LINE L1 -8 6292 6174 453 256 132 12 chr18 45055031 45055273 -41622275 - L1MDb LINE L1 -5182 888 618 308 274 131 7 chr18 45055289 45055442 -41622106 + L1MC4a LINE L1 6059 6230 -1578 268 155 28 28 chr18 45055452 45055523 -41622025 + (TATG)n Simple_repeat Simple_repeat 2 72 0 236 218 0 0 chr18 45055670 45055725 -41621823 + L1MC4a LINE L1 6413 6467 -1341 850 284 81 19 chr18 45055809 45056129 -41621419 + L1MC4 LINE L1 6723 7062 -980 393 58 0 0 chr18 45056231 45056283 -41621265 + (CA)n Simple_repeat Simple_repeat 2 53 0 339 320 45 45 chr18 45056478 45056700 -41620848 + L1MC4 LINE L1 7274 7495 -547 * 534 324 86 17 chr18 45056669 45057252 -41620296 + L1MC5 LINE L1 7292 7914 -47 188 159 0 23 chr18 45057919 45057963 -41619585 + T-rich Low_complexity Low_complexity 2 44 0 180 0 0 0 chr18 45057961 45057981 -41619567 + (TTG)n Simple_repeat Simple_repeat 2 21 0 * 2029 139 3 7 chr18 45058344 45058654 -41618894 - AluSq SINE Alu -2 311 3 23 68 0 0 chr18 45058951 45058995 -41618553 + AT_rich Low_complexity Low_complexity 1 44 0 32 0 0 0 chr18 45059304 45059336 -41618212 + AT_rich Low_complexity Low_complexity 1 32 0 309 51 0 0 chr18 45060552 45060591 -41616957 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 250 303 13 0 chr18 45061353 45061429 -41616119 - MIR SINE MIR -109 153 77 219 36 0 0 chr18 45062457 45062485 -41615063 + (T)n Simple_repeat Simple_repeat 1 28 0 272 299 190 33 chr18 45063164 45063348 -41614200 - MIR SINE MIR -48 214 2 23 0 0 0 chr18 45063576 45063599 -41613949 + AT_rich Low_complexity Low_complexity 1 23 0 2794 137 9 43 chr18 45065129 45065663 -41611885 - L1MA10 LINE L1 -2 6332 5817 252 122 0 0 chr18 45066159 45066200 -41611348 + (CATA)n Simple_repeat Simple_repeat 4 44 0 641 322 144 31 chr18 45069092 45069769 -41607779 - L2 LINE L2 0 3313 2556 219 331 83 45 chr18 45069769 45069902 -41607646 - L2 LINE L2 -895 2419 2282 299 332 89 59 chr18 45069987 45070189 -41607359 + MIR SINE MIR 5 212 -50 205 200 20 0 chr18 45070249 45070299 -41607249 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 203 355 0 16 chr18 45070321 45070383 -41607165 + MER5A DNA MER1_type 84 144 -45 243 0 0 0 chr18 45070939 45070966 -41606582 + (T)n Simple_repeat Simple_repeat 1 27 0 214 302 0 0 chr18 45071372 45071425 -41606123 - MIR SINE MIR -132 76 24 23 33 0 0 chr18 45071663 45071693 -41605855 + AT_rich Low_complexity Low_complexity 1 30 0 2204 160 16 5 chr18 45071972 45072353 -41605195 + MLT1B LTR MaLR 1 385 -5 469 321 38 16 chr18 45073281 45073465 -41604083 - MIR SINE MIR -70 192 5 2116 123 7 0 chr18 45073861 45074162 -41603386 - AluSx SINE Alu -9 303 1 198 0 0 0 chr18 45074209 45074231 -41603317 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr18 45075423 45075445 -41602103 + AT_rich Low_complexity Low_complexity 1 22 0 32 81 0 0 chr18 45075602 45075676 -41601872 + AT_rich Low_complexity Low_complexity 1 74 0 12896 88 16 3 chr18 45075676 45079379 -41598169 - L1PA7 LINE L1 -15 6454 2651 11610 114 26 27 chr18 45079382 45081328 -41596220 - L1PA7 LINE L1 -4481 1980 1 24 32 0 0 chr18 45081381 45081412 -41596136 + AT_rich Low_complexity Low_complexity 1 31 0 332 182 0 13 chr18 45081489 45081566 -41595982 - L1MA10 LINE L1 -5 6329 6254 1641 269 21 2 chr18 45081589 45082021 -41595527 - L1ME1 LINE L1 -327 5839 5400 202 349 36 0 chr18 45082746 45082829 -41594719 + MIR SINE MIR 100 185 -77 23 0 0 0 chr18 45086411 45086434 -41591114 + AT_rich Low_complexity Low_complexity 1 23 0 276 300 61 54 chr18 45086475 45086618 -41590930 - MIR SINE MIR -60 148 4 23 54 0 0 chr18 45087006 45087043 -41590505 + AT_rich Low_complexity Low_complexity 1 37 0 207 389 43 19 chr18 45087781 45087943 -41589605 + MIR3 SINE MIR 31 196 -12 21 36 0 0 chr18 45088265 45088293 -41589255 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr18 45088536 45088558 -41588990 + AT_rich Low_complexity Low_complexity 1 22 0 383 374 27 11 chr18 45091619 45091806 -41585742 + MIR3 SINE MIR 14 203 -5 33 90 0 0 chr18 45094910 45094999 -41582549 + AT_rich Low_complexity Low_complexity 1 89 0 1441 233 7 0 chr18 45096817 45097109 -41580439 + AluJb SINE Alu 1 294 -18 22 35 0 0 chr18 45097501 45097530 -41580018 + AT_rich Low_complexity Low_complexity 1 29 0 201 74 0 0 chr18 45097610 45097637 -41579911 + (TG)n Simple_repeat Simple_repeat 2 28 0 2168 107 3 3 chr18 45098534 45098842 -41578706 + AluSc SINE Alu 1 308 -1 388 300 63 40 chr18 45099219 45099850 -41577698 + L1ME3A LINE L1 1317 2121 -4704 501 271 92 58 chr18 45100111 45100458 -41577090 + L1ME3A LINE L1 2524 2882 -3943 474 139 0 0 chr18 45100498 45100577 -41576971 + MADE1 DNA Mariner 1 79 -1 309 287 76 21 chr18 45100623 45100912 -41576636 + L1ME3A LINE L1 2836 3140 -3504 44038 40 1 1 chr18 45101016 45107171 -41570377 + L1PA4 LINE L1 2 6152 -3 276 266 0 32 chr18 45107177 45107271 -41570277 + L1ME3A LINE L1 3408 3498 -3146 1299 273 109 35 chr18 45107355 45108247 -41569301 + L1ME3A LINE L1 5688 6646 -22 282 264 6 66 chr18 45109977 45110144 -41567404 + GA-rich Low_complexity Low_complexity 2 158 0 2100 137 0 6 chr18 45110240 45110554 -41566994 + AluSx SINE Alu 1 312 0 2952 223 68 34 chr18 45110554 45111886 -41565662 - L1MC/D LINE L1 -650 5592 4211 230 355 93 12 chr18 45112186 45112358 -41565190 - L2 LINE L2 -5 3308 3123 261 0 0 0 chr18 45112838 45112867 -41564681 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4370 18 0 0 chr18 45113169 45113675 -41563873 - L1PA2 LINE L1 -1787 4359 3854 8838 23 0 0 chr18 45113675 45115493 -41562055 + L1PA2 LINE L1 4328 6153 -2 1636 174 0 45 chr18 45115848 45116159 -41561389 - AluJb SINE Alu -15 297 1 25 65 0 0 chr18 45117405 45117451 -41560097 + AT_rich Low_complexity Low_complexity 1 46 0 21 36 0 0 chr18 45117544 45117572 -41559976 + AT_rich Low_complexity Low_complexity 1 28 0 303 273 53 53 chr18 45118808 45118940 -41558608 - MIR3 SINE MIR -7 201 70 213 182 0 0 chr18 45120000 45120033 -41557515 + (TG)n Simple_repeat Simple_repeat 2 34 0 189 121 0 0 chr18 45120231 45120264 -41557284 + (T)n Simple_repeat Simple_repeat 1 33 0 388 247 12 0 chr18 45123173 45123258 -41554290 + MIR SINE MIR 70 155 -107 3059 228 17 5 chr18 45123260 45123892 -41553656 - MER82 DNA MER2_type 0 653 14 1769 205 11 14 chr18 45124148 45124514 -41553034 - MLT1A1 LTR MaLR 0 365 1 689 294 186 11 chr18 45124747 45125097 -41552451 + MLT1J1 LTR MaLR 1 411 -35 192 412 18 44 chr18 45125119 45125233 -41552315 + MIR SINE MIR 33 143 -65 1419 236 75 47 chr18 45126284 45126750 -41550798 + MLT1D LTR MaLR 27 505 0 717 306 83 24 chr18 45126760 45127228 -41550320 - L1ME LINE L1 -398 5764 5269 269 191 0 63 chr18 45128170 45128233 -41549315 + L2 LINE L2 3213 3271 -1 785 243 36 31 chr18 45128687 45128909 -41548639 - MER58A DNA MER1_type -1 223 1 449 371 76 40 chr18 45129016 45129584 -41547964 - L2 LINE L2 -470 2844 2257 390 343 114 8 chr18 45130825 45131061 -41546487 - MIR SINE MIR 0 262 2 24 0 0 0 chr18 45132414 45132438 -41545110 + AT_rich Low_complexity Low_complexity 1 24 0 305 180 38 60 chr18 45132562 45132745 -41544803 + (TA)n Simple_repeat Simple_repeat 1 179 0 216 146 12 94 chr18 45132758 45132929 -41544619 + (CATATA)n Simple_repeat Simple_repeat 2 158 0 204 188 38 30 chr18 45132975 45133108 -41544440 + (CATATA)n Simple_repeat Simple_repeat 3 136 0 264 160 64 64 chr18 45133126 45133220 -41544328 - Charlie7 DNA MER1_type -6 2606 2513 762 284 81 62 chr18 45133243 45133839 -41543709 + L1M4 LINE L1 3594 4200 -1946 438 348 64 38 chr18 45133886 45134277 -41543271 - MLT1I LTR MaLR -1 408 8 436 297 151 52 chr18 45134285 45134689 -41542859 + L1M4 LINE L1 4246 4689 -1457 285 274 34 57 chr18 45134766 45134941 -41542607 + L1M4 LINE L1 4808 4978 -1168 858 213 0 0 chr18 45135878 45136136 -41541412 + CT-rich Low_complexity Low_complexity 1 258 0 2125 24 0 0 chr18 45136825 45137073 -41540475 - L1PA4 LINE L1 -1 6154 5907 1436 123 15 0 chr18 45138242 45138446 -41539102 + AluSg/x SINE Alu 85 291 -21 16526 26 0 0 chr18 45139059 45141776 -41535772 + L1PA3 LINE L1 3435 6152 -3 269 266 0 32 chr18 45141782 45141876 -41535672 + L1ME3A LINE L1 2910 3000 -3146 1222 273 109 35 chr18 45141960 45142852 -41534696 + L1ME3A LINE L1 5190 6148 -22 282 264 6 66 chr18 45144580 45144747 -41532801 + GA-rich Low_complexity Low_complexity 2 158 0 2124 137 0 6 chr18 45144843 45145157 -41532391 + AluSx SINE Alu 1 312 0 2864 223 68 34 chr18 45145157 45146489 -41531059 - L1MC/D LINE L1 -650 5592 4211 212 331 111 29 chr18 45146789 45146961 -41530587 - L2 LINE L2 -5 3308 3123 261 0 0 0 chr18 45147441 45147470 -41530078 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 4400 20 0 0 chr18 45147772 45148282 -41529266 - L1P1 LINE L1 -1787 4359 3850 * 8879 17 6 0 chr18 45148278 45149757 -41527791 + L1P1 LINE L1 4328 5816 -339 7809 14 1 0 chr18 45149857 45151095 -41526453 + L1PA2 LINE L1 4944 6185 0 1249 210 77 44 chr18 45151427 45151907 -41525641 + LTR54B LTR ERV1 1 496 -2 195 139 0 0 chr18 45152704 45152740 -41524808 + (TG)n Simple_repeat Simple_repeat 1 36 0 1750 153 3 27 chr18 45153124 45153478 -41524070 - MER4A LTR ERV1 0 664 261 522 115 42 21 chr18 45153478 45153574 -41523974 - MER4A LTR ERV1 -566 98 1 334 205 0 60 chr18 45153639 45153722 -41523826 - L2 LINE L2 -51 3262 3185 28 61 0 0 chr18 45154978 45155027 -41522521 + AT_rich Low_complexity Low_complexity 1 49 0 234 371 133 0 chr18 45155067 45155172 -41522376 - L2 LINE L2 -1 3271 3153 219 237 53 13 chr18 45155532 45155608 -41521940 - L2 LINE L2 -5 3267 3189 420 286 9 0 chr18 45156208 45156320 -41521228 - MER5A DNA MER1_type -6 183 71 2095 134 7 0 chr18 45156477 45156776 -41520772 + AluSx SINE Alu 1 301 -11 219 36 0 0 chr18 45158396 45158424 -41519124 + (TG)n Simple_repeat Simple_repeat 1 28 0 2056 119 0 7 chr18 45158424 45158708 -41518840 - AluSq SINE Alu -29 284 1 1299 236 50 34 chr18 45158710 45159535 -41518013 - L1MC/D LINE L1 -653 5983 5154 913 241 32 10 chr18 45159599 45159910 -41517638 - L1MC/D LINE L1 -2241 4299 3982 5881 168 13 6 chr18 45159934 45160295 -41517253 - L1PB1 LINE L1 0 6151 5794 504 0 0 0 chr18 45160295 45160351 -41517197 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 5881 168 13 6 chr18 45160351 45162043 -41515505 - L1PB1 LINE L1 -357 5794 4081 2809 191 0 21 chr18 45162056 45162451 -41515097 + L1 LINE L1 3510 3891 -2255 4076 78 28 2 chr18 45162451 45163016 -41514532 - LTR19B LTR ERV1 0 580 1 2809 191 0 21 chr18 45163016 45163195 -41514353 + L1 LINE L1 3891 4072 -2074 945 304 5 13 chr18 45163190 45163571 -41513977 - L1MC/D LINE L1 -2552 3988 3611 * 4970 221 83 20 chr18 45163568 45165374 -41512174 - L1MDa LINE L1 -3687 2853 945 180 97 0 0 chr18 45165402 45165433 -41512115 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1890 209 52 106 chr18 45165433 45165954 -41511594 - MLT2B3 LTR ERVL -58 496 4 1595 229 96 75 chr18 45165955 45166505 -41511043 - L1MDa LINE L1 -5591 949 388 22 35 0 0 chr18 45166505 45166534 -41511014 + AT_rich Low_complexity Low_complexity 1 29 0 314 203 0 17 chr18 45166535 45166594 -41510954 + AluS SINE Alu 221 278 -23 1173 218 79 93 chr18 45166596 45166963 -41510585 - L1MDa LINE L1 -6155 385 24 248 280 119 25 chr18 45167043 45167161 -41510387 - L2 LINE L2 -5 3267 3139 226 299 308 5 chr18 45167696 45167907 -41509641 + L2 LINE L2 3026 3300 -13 201 224 0 0 chr18 45168947 45169005 -41508543 + GA-rich Low_complexity Low_complexity 2 59 0 1980 182 22 77 chr18 45169237 45169681 -41507867 - MSTB1 LTR MaLR -12 420 1 781 270 0 0 chr18 45169815 45170004 -41507544 + MER5A DNA MER1_type 1 189 0 2025 94 8 0 chr18 45170134 45170399 -41507149 + AluY SINE Alu 30 296 -15 550 309 11 6 chr18 45173497 45173672 -41503876 - MER5B DNA MER1_type -2 176 1 281 328 53 11 chr18 45173881 45174010 -41503538 + MIR SINE MIR 18 151 -65 659 166 195 137 chr18 45174047 45174354 -41503194 - MLT2B1 LTR ERVL -2 518 194 967 214 85 39 chr18 45175418 45175699 -41501849 - LTR19C LTR ERV1 0 779 486 * 1574 208 17 83 chr18 45175677 45176096 -41501452 - LTR9 LTR ERV1 -221 391 1 721 277 40 10 chr18 45177456 45177658 -41499890 + LTR35 LTR ERV1 411 618 0 336 328 73 39 chr18 45177678 45177882 -41499666 + MER57-int LTR ERV1 1068 1278 -6259 457 314 12 24 chr18 45178637 45178889 -41498659 + MER57-int LTR ERV1 1409 1657 -5019 927 305 56 35 chr18 45179170 45179887 -41497661 + MER57-int LTR ERV1 1986 2717 -3959 2341 346 45 34 chr18 45180659 45183629 -41493919 + MER57-int LTR ERV1 3389 6108 -1648 1955 178 90 3 chr18 45184221 45184576 -41492972 - MSTB LTR MaLR 0 426 41 745 189 0 8 chr18 45184593 45184725 -41492823 - FLAM_C SINE Alu -12 131 1 321 157 0 0 chr18 45184726 45184777 -41492771 - MSTB LTR MaLR -373 53 3 837 285 67 56 chr18 45185251 45185819 -41491729 + MER57-int LTR ERV1 6079 6652 -24 2276 69 0 4 chr18 45185822 45186099 -41491449 + AluY SINE Alu 1 276 -35 459 0 0 0 chr18 45186099 45186150 -41491398 + (TAAAA)n Simple_repeat Simple_repeat 5 55 0 1780 205 30 116 chr18 45186237 45186841 -41490707 - MLT2B3 LTR ERVL -2 552 1 227 163 116 0 chr18 45186983 45187026 -41490522 + LTR60 LTR ERV1 282 329 -257 778 261 39 15 chr18 45187101 45187304 -41490244 + LTR35 LTR ERV1 411 618 0 248 111 22 0 chr18 45187696 45187741 -41489807 + (CTATT)n Simple_repeat Simple_repeat 4 49 0 354 23 0 0 chr18 45189092 45189135 -41488413 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 201 74 0 0 chr18 45189134 45189161 -41488387 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 218 257 43 29 chr18 45189326 45189396 -41488152 + L2 LINE L2 3182 3252 -61 23 92 0 0 chr18 45189410 45189475 -41488073 + AT_rich Low_complexity Low_complexity 1 65 0 455 235 11 24 chr18 45190152 45190449 -41487099 + GA-rich Low_complexity Low_complexity 1 293 0 217 184 20 0 chr18 45191947 45191996 -41485552 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 321 123 0 0 chr18 45193548 45193613 -41483935 + (TA)n Simple_repeat Simple_repeat 1 65 0 365 54 18 0 chr18 45193671 45193727 -41483821 + (TA)n Simple_repeat Simple_repeat 2 58 0 390 21 0 0 chr18 45193883 45193930 -41483618 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2030 125 0 0 chr18 45193932 45194213 -41483335 - AluSx SINE Alu -31 281 1 2413 191 55 4 chr18 45195070 45195562 -41481986 - LTR53 LTR ERVL -2 517 1 2155 187 18 50 chr18 45197057 45197559 -41479989 + MER66B LTR ERV1 1 486 0 24 0 0 0 chr18 45197798 45197822 -41479726 + AT_rich Low_complexity Low_complexity 1 24 0 467 248 200 14 chr18 45198038 45198183 -41479365 + MER5A DNA MER1_type 17 188 -1 22 0 0 0 chr18 45198864 45198886 -41478662 + AT_rich Low_complexity Low_complexity 1 22 0 1320 209 40 23 chr18 45198914 45199216 -41478332 - AluJb SINE Alu -5 307 1 334 277 164 39 chr18 45199282 45199513 -41478035 - MER112 DNA MER1_type 0 260 1 295 207 6 41 chr18 45200115 45200284 -41477264 + (TA)n Simple_repeat Simple_repeat 2 164 0 942 219 158 3 chr18 45200290 45200601 -41476947 + LTR37A LTR ERV1 15 373 -53 2559 111 3 13 chr18 45200677 45201056 -41476492 + THE1C LTR MaLR 1 375 0 2514 199 58 45 chr18 45201056 45201750 -41475798 - L1MA9 LINE L1 -41 6271 5569 1652 141 9 51 chr18 45201751 45202084 -41475464 + MER4D LTR ERV1 1 319 -553 429 36 0 0 chr18 45202088 45202143 -41475405 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 261 159 0 0 chr18 45202146 45202209 -41475339 + (TA)n Simple_repeat Simple_repeat 1 63 0 320 273 23 0 chr18 45202210 45202298 -41475250 + L1MC4 LINE L1 6614 6703 -1339 2590 155 25 88 chr18 45202324 45202917 -41474631 + MER4D LTR ERV1 314 869 -3 1331 144 27 120 chr18 45202920 45203253 -41474295 - L1MA9 LINE L1 -741 5571 5270 940 220 0 23 chr18 45203255 45203341 -41474207 + L1 LINE L1 5054 5140 -1006 1418 214 99 37 chr18 45203341 45203775 -41473773 + LOR1b LTR ERV1 1 461 0 940 220 0 23 chr18 45203775 45203906 -41473642 + L1 LINE L1 5140 5266 -880 249 121 0 91 chr18 45203908 45203974 -41473574 + LTR37A LTR ERV1 367 426 0 1705 126 119 0 chr18 45204036 45204314 -41473234 + AluSx SINE Alu 1 311 -1 1431 143 0 0 chr18 45204497 45204707 -41472841 - AluSx SINE Alu -94 218 9 273 125 0 0 chr18 45206002 45206042 -41471506 + tRNA-Met-e tRNA tRNA 1 40 -35 1454 192 42 0 chr18 45206431 45206724 -41470824 + AluJb SINE Alu 13 316 0 193 348 34 22 chr18 45207147 45207236 -41470312 + L2 LINE L2 3139 3228 -44 1225 205 12 105 chr18 45208504 45208914 -41468634 + MLT1A2 LTR MaLR 1 372 -2 1192 121 0 0 chr18 45208991 45209157 -41468391 + AluSg/x SINE Alu 128 293 -17 231 209 179 0 chr18 45209320 45209387 -41468161 + MIR3 SINE MIR 95 173 -35 1052 321 96 23 chr18 45209437 45209992 -41467556 + MLT1G1 LTR MaLR 1 595 0 255 280 70 56 chr18 45210079 45210222 -41467326 + L3 LINE CR1 1382 1526 -51 602 289 47 17 chr18 45210408 45210640 -41466908 - MIR SINE MIR -1 261 23 209 314 62 67 chr18 45211423 45211621 -41465927 + MIR SINE MIR 16 211 -51 304 323 116 6 chr18 45211889 45212053 -41465495 - MIR SINE MIR -15 247 66 1890 220 32 19 chr18 45212154 45212586 -41464962 + MER21B LTR ERV1 423 860 -3 225 267 27 13 chr18 45212598 45212673 -41464875 - MER58A DNA MER1_type -31 76 1 466 296 28 17 chr18 45213380 45213559 -41463989 + L1ME3A LINE L1 137 317 -5888 441 273 138 58 chr18 45214176 45215418 -41462130 + L1ME3A LINE L1 1392 2695 -3520 273 196 0 0 chr18 45215438 45215494 -41462054 + (TA)n Simple_repeat Simple_repeat 2 57 0 257 255 67 39 chr18 45215494 45215702 -41461846 + L1ME3A LINE L1 5335 5548 -691 1264 273 55 21 chr18 45215757 45216269 -41461279 + L1ME3A LINE L1 5703 6231 -8 962 286 75 27 chr18 45217594 45217965 -41459583 + MLT1I LTR MaLR 21 409 0 336 24 0 0 chr18 45218792 45218833 -41458715 + (TA)n Simple_repeat Simple_repeat 2 42 0 4558 45 0 0 chr18 45219320 45219871 -41457677 + L1PA5 LINE L1 5601 6151 -3 27 29 0 0 chr18 45219871 45219905 -41457643 + AT_rich Low_complexity Low_complexity 1 34 0 28 0 0 0 chr18 45220000 45220028 -41457520 + AT_rich Low_complexity Low_complexity 1 28 0 889 231 66 101 chr18 45220969 45221458 -41456090 - MER39 LTR ERV1 0 676 7 22 0 0 0 chr18 45221707 45221729 -41455819 + AT_rich Low_complexity Low_complexity 1 22 0 385 83 0 5 chr18 45222121 45222174 -41455374 - MLT2A1 LTR ERVL 0 453 410 339 85 0 0 chr18 45222174 45222221 -41455327 + (TG)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr18 45222247 45222267 -41455281 + (TA)n Simple_repeat Simple_repeat 2 21 0 389 57 0 0 chr18 45222270 45222323 -41455225 - HERVL LTR ERVL -29 5625 5573 807 66 0 0 chr18 45222323 45222429 -41455119 + (TA)n Simple_repeat Simple_repeat 1 106 0 2760 98 3 8 chr18 45222429 45222816 -41454732 - MLT2A1 LTR ERVL -59 385 1 26795 83 6 4 chr18 45222816 45228365 -41449183 - HERVL-A1 LTR ERVL 0 5654 1 314 121 0 52 chr18 45228365 45228403 -41449145 - MLT2A1 LTR ERVL 0 453 417 198 0 0 0 chr18 45228403 45228425 -41449123 + (TG)n Simple_repeat Simple_repeat 2 23 0 314 121 0 52 chr18 45228425 45228444 -41449104 - MLT2A1 LTR ERVL -36 417 399 246 189 0 19 chr18 45228445 45228498 -41449050 + (TA)n Simple_repeat Simple_repeat 2 53 0 243 0 0 0 chr18 45228501 45228528 -41449020 + (TG)n Simple_repeat Simple_repeat 2 28 0 2865 101 2 5 chr18 45228538 45228943 -41448605 - MLT2A1 LTR ERVL -40 404 1 544 299 93 20 chr18 45229095 45229396 -41448152 - MER5C DNA MER1_type -1 323 1 209 289 218 0 chr18 45230572 45230714 -41446834 + L2 LINE L2 2804 2976 -338 1799 161 33 10 chr18 45230750 45231054 -41446494 - AluSx SINE Alu -1 311 1 298 291 78 10 chr18 45231064 45231167 -41446381 + L2 LINE L2 3118 3227 -86 264 377 38 0 chr18 45231204 45231310 -41446238 - MIR3 SINE MIR -39 169 60 692 313 18 9 chr18 45231581 45231805 -41445743 + MIR SINE MIR 29 254 -8 2069 209 37 37 chr18 45231841 45232359 -41445189 + LTR53 LTR ERVL 1 518 -1 186 231 0 0 chr18 45232919 45232958 -41444590 + L2 LINE L2 3186 3224 -48 1604 192 0 53 chr18 45234393 45234716 -41442832 - AluJo SINE Alu -4 308 3 254 237 17 0 chr18 45234964 45235023 -41442525 + (TA)n Simple_repeat Simple_repeat 2 61 0 2190 71 43 0 chr18 45235059 45235339 -41442209 + AluYa5 SINE Alu 20 311 0 2956 237 121 19 chr18 45235437 45235754 -41441794 - L1ME1 LINE L1 -5 6161 5878 690 264 14 64 chr18 45235754 45235974 -41441574 + MER63A DNA MER1_type 1 209 -1 2956 237 121 19 chr18 45235974 45236809 -41440739 - L1ME1 LINE L1 -288 5878 4887 27 49 0 0 chr18 45237668 45237709 -41439839 + AT_rich Low_complexity Low_complexity 1 41 0 29 84 0 0 chr18 45237786 45237857 -41439691 + AT_rich Low_complexity Low_complexity 1 71 0 261 348 78 0 chr18 45240288 45240403 -41437145 + MIR3 SINE MIR 63 186 -22 21 0 0 0 chr18 45240592 45240613 -41436935 + AT_rich Low_complexity Low_complexity 1 21 0 345 385 19 12 chr18 45241168 45241329 -41436219 + MIR3 SINE MIR 26 187 -21 282 56 0 0 chr18 45242226 45242262 -41435286 + (CA)n Simple_repeat Simple_repeat 1 36 0 225 323 25 43 chr18 45242314 45242449 -41435099 - MIR SINE MIR -73 135 30 2490 200 28 2 chr18 45242789 45243255 -41434293 + MER66A LTR ERV1 1 478 0 35 41 0 0 chr18 45243316 45243365 -41434183 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr18 45243372 45243394 -41434154 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr18 45243467 45243492 -41434056 + (A)n Simple_repeat Simple_repeat 1 25 0 563 300 107 36 chr18 45243749 45244169 -41433379 + LTR16A LTR ERVL 1 450 0 288 222 0 0 chr18 45244560 45244632 -41432916 + CT-rich Low_complexity Low_complexity 1 72 0 548 207 15 0 chr18 45244671 45244806 -41432742 + CT-rich Low_complexity Low_complexity 3 139 0 279 273 26 0 chr18 45249778 45249855 -41427693 + MER39 LTR ERV1 4 82 -625 309 201 0 0 chr18 45249923 45249983 -41427565 + MER39 LTR ERV1 15 71 -641 910 231 72 81 chr18 45250115 45250461 -41427087 + MER39 LTR ERV1 340 682 -25 2304 65 0 14 chr18 45250666 45250959 -41426589 + AluY SINE Alu 1 289 -22 832 196 38 0 chr18 45250965 45251123 -41426425 + FRAM SINE Alu 1 164 -12 1504 218 0 25 chr18 45251270 45251591 -41425957 + MLT2C1 LTR ERVL 31 343 -54 180 330 55 22 chr18 45251888 45251979 -41425569 - MIR SINE MIR -48 214 121 450 349 127 9 chr18 45252528 45252757 -41424791 - MIR SINE MIR -2 260 5 459 266 32 16 chr18 45252886 45253010 -41424538 + L2 LINE L2 3184 3309 -4 876 263 36 25 chr18 45253438 45253780 -41423768 + L1MC4 LINE L1 6126 6242 0 2340 76 0 7 chr18 45254018 45254319 -41423229 + AluY SINE Alu 1 299 -12 340 333 23 16 chr18 45254473 45254602 -41422946 - MER5B DNA MER1_type -7 171 42 1375 201 74 34 chr18 45254602 45254981 -41422567 - LTR8A LTR ERV1 0 727 334 789 167 0 0 chr18 45255010 45255136 -41422412 - LTR8A LTR ERV1 -465 262 137 752 129 8 8 chr18 45255370 45255494 -41422054 - LTR8A LTR ERV1 -603 124 1 192 268 0 0 chr18 45255495 45255536 -41422012 - MER5B DNA MER1_type -135 43 3 958 106 14 0 chr18 45256022 45256163 -41421385 - MER41B LTR ERV1 -492 143 1 451 390 49 15 chr18 45256168 45256496 -41421052 + L2 LINE L2 111 449 -2865 1182 217 40 12 chr18 45256532 45256879 -41420669 - MER31B LTR ERV1 0 466 72 364 336 70 0 chr18 45256916 45257044 -41420504 - MIR SINE MIR -124 138 2 36 0 0 0 chr18 45257590 45257626 -41419922 + AT_rich Low_complexity Low_complexity 1 36 0 258 358 75 20 chr18 45258641 45258842 -41418706 + L2 LINE L2 2580 2791 -523 818 270 102 0 chr18 45259374 45259589 -41417959 - MER8 DNA MER2_type -2 237 1 1192 276 138 67 chr18 45259904 45260593 -41416955 - MER21B LTR ERV1 -125 738 1 32 67 0 0 chr18 45260954 45261014 -41416534 + AT_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr18 45261302 45261324 -41416224 + AT_rich Low_complexity Low_complexity 1 22 0 6754 125 33 5 chr18 45261324 45262798 -41414750 - L1MA2 LINE L1 0 6304 4790 1631 116 87 25 chr18 45263132 45263282 -41414266 + L1PA10 LINE L1 5800 5939 -229 5767 118 148 31 chr18 45263282 45264388 -41413160 + MER11B LTR ERVK 1 1236 0 1631 116 87 25 chr18 45264388 45264512 -41413036 + L1PA10 LINE L1 5939 6091 -77 2607 175 23 6 chr18 45264514 45265014 -41412534 + LTR27 LTR ERV1 3 479 -22 451 101 0 91 chr18 45265014 45265113 -41412435 + L1PA8 LINE L1 6074 6163 -9 969 268 67 47 chr18 45265328 45265776 -41411772 - LTR16A1 LTR ERVL 0 457 1 228 173 58 0 chr18 45266205 45266257 -41411291 + (CATATA)n Simple_repeat Simple_repeat 5 59 0 284 324 0 48 chr18 45267790 45267895 -41409653 - L2 LINE L2 -27 3245 3146 302 327 18 26 chr18 45267996 45268109 -41409439 + MER20B DNA MER1_type 67 178 -605 253 391 42 21 chr18 45268365 45268603 -41408945 - L2 LINE L2 -373 2941 2699 988 233 35 10 chr18 45268804 45269117 -41408431 - MER33 DNA MER1_type -3 321 1 359 315 9 111 chr18 45269726 45269942 -41407606 - MIR SINE MIR -57 205 12 189 129 0 0 chr18 45269951 45269982 -41407566 + L2 LINE L2 3282 3312 -1 387 259 333 6 chr18 45270752 45270926 -41406622 + MIR SINE MIR 17 247 -15 1345 327 76 61 chr18 45271118 45272699 -41404849 + L1PA12 LINE L1 9 2181 -5400 750 270 58 19 chr18 45272924 45273183 -41404365 + L1PA12 LINE L1 2208 2476 -5105 7007 55 6 3 chr18 45273189 45274084 -41403464 + L1PA6 LINE L1 5254 6150 -4 207 0 0 0 chr18 45274184 45274207 -41403341 + (T)n Simple_repeat Simple_repeat 1 23 0 30 27 0 0 chr18 45274218 45274255 -41403293 + GC_rich Low_complexity Low_complexity 1 37 0 1895 94 4 4 chr18 45274483 45274749 -41402799 - AluY SINE Alu -5 306 41 2192 110 0 19 chr18 45274782 45275092 -41402456 + AluSc SINE Alu 1 304 -5 4074 136 20 11 chr18 45275093 45275807 -41401741 + L1PA16 LINE L1 5370 6124 -42 8004 7 0 0 chr18 45276237 45277180 -41400368 + L1HS LINE L1 5211 6153 -2 279 71 0 0 chr18 45277181 45277223 -41400325 + (A)n Simple_repeat Simple_repeat 1 42 0 1008 99 0 0 chr18 45277517 45277658 -41399890 - AluSp/q SINE Alu -3 310 170 1238 148 4 55 chr18 45277779 45278016 -41399532 - L1PA16 LINE L1 -1 6165 5941 307 336 35 0 chr18 45278853 45278969 -41398579 + MIR3 SINE MIR 60 179 -29 194 306 0 14 chr18 45278953 45279025 -41398523 + L2 LINE L2 989 1059 -2255 * 509 304 70 0 chr18 45279066 45279280 -41398268 - L1MC4 LINE L1 -627 7415 7187 * 948 266 120 6 chr18 45279253 45279642 -41397906 - L1MC4 LINE L1 -850 7145 6688 23 0 0 0 chr18 45280388 45280411 -41397137 + AT_rich Low_complexity Low_complexity 1 23 0 1976 203 54 2 chr18 45282033 45282438 -41395110 + MSTB LTR MaLR 1 426 0 1705 153 57 48 chr18 45282527 45282899 -41394649 - THE1C LTR MaLR 0 375 1 2178 205 114 6 chr18 45283861 45284368 -41393180 - L1M3c LINE L1 -4904 1237 676 342 218 0 0 chr18 45284396 45284506 -41393042 + (TA)n Simple_repeat Simple_repeat 2 111 0 43 20 0 0 chr18 45285494 45285544 -41392004 + AT_rich Low_complexity Low_complexity 1 50 0 25 31 0 0 chr18 45285690 45285722 -41391826 + AT_rich Low_complexity Low_complexity 1 32 0 2507 212 71 15 chr18 45285939 45286557 -41390991 + MER39B LTR ERV1 1 653 0 504 330 65 33 chr18 45286752 45287210 -41390338 - L1ME LINE L1 -435 5729 5257 32 43 0 0 chr18 45287739 45287785 -41389763 + AT_rich Low_complexity Low_complexity 1 46 0 216 281 58 101 chr18 45288554 45288693 -41388855 + L2 LINE L2 2343 2475 -839 354 311 136 21 chr18 45288797 45289179 -41388369 - L1ME LINE L1 -1214 4932 4507 1708 191 153 5 chr18 45289317 45289689 -41387859 - MSTA LTR MaLR -1 427 1 7190 198 22 2 chr18 45289689 45291308 -41386240 - MSTA-int LTR MaLR 0 1651 1 1853 148 151 5 chr18 45291310 45291682 -41385866 - MSTA LTR MaLR -2 426 1 389 287 87 9 chr18 45291943 45292058 -41385490 + L2 LINE L2 3148 3271 -1 278 115 19 0 chr18 45292114 45292166 -41385382 + GA-rich Low_complexity Low_complexity 1 53 0 912 264 69 54 chr18 45293439 45293886 -41383662 - MLT1C LTR MaLR -6 461 8 214 145 29 43 chr18 45295078 45295147 -41382401 + T-rich Low_complexity Low_complexity 4 71 0 231 346 59 30 chr18 45295606 45295707 -41381841 + L3 LINE CR1 1465 1568 -9 22 80 0 0 chr18 45295785 45295835 -41381713 + AT_rich Low_complexity Low_complexity 1 50 0 828 208 25 0 chr18 45295954 45296151 -41381397 - L1MD2 LINE L1 0 6359 6158 915 149 31 41 chr18 45296575 45296769 -41380779 - MER89 LTR ERV1 0 559 368 23 54 0 0 chr18 45297987 45298024 -41379524 + AT_rich Low_complexity Low_complexity 1 37 0 198 0 0 0 chr18 45298154 45298176 -41379372 + (CA)n Simple_repeat Simple_repeat 2 23 0 221 340 113 0 chr18 45298906 45299003 -41378545 - L2 LINE L2 -16 3297 3190 238 299 76 60 chr18 45299292 45299476 -41378072 + L1MEd LINE L1 207 393 -5726 876 333 68 69 chr18 45299553 45299849 -41377699 + L1MEd LINE L1 462 757 -5362 315 0 0 0 chr18 45299849 45299884 -41377664 + (CA)n Simple_repeat Simple_repeat 1 35 0 876 333 68 69 chr18 45299884 45299980 -41377568 + L1MEd LINE L1 757 852 -5267 6082 95 18 0 chr18 45299980 45300964 -41376584 + L1PA10 LINE L1 5151 6153 -15 876 333 68 69 chr18 45300964 45301365 -41376183 + L1MEd LINE L1 852 1255 -4864 209 182 18 0 chr18 45302515 45302570 -41374978 + T-rich Low_complexity Low_complexity 4 59 0 243 0 0 0 chr18 45303043 45303070 -41374478 + (CA)n Simple_repeat Simple_repeat 2 28 0 1714 135 11 0 chr18 45303076 45303350 -41374198 - MER49 LTR ERV1 -19 904 628 1377 196 41 56 chr18 45303353 45303694 -41373854 + LTR32 LTR ERVL 15 350 -121 882 172 0 6 chr18 45303695 45303852 -41373696 + LTR32 LTR ERVL 316 471 0 * 2982 144 58 48 chr18 45303852 45304475 -41373073 - MER49 LTR ERV1 -294 629 1 251 394 8 0 chr18 45305263 45305395 -41372153 - L2 LINE L2 -12 3301 3169 202 293 0 35 chr18 45305729 45305787 -41371761 - L2 LINE L2 -534 2780 2725 1019 212 35 54 chr18 45305844 45306103 -41371445 + LTR32 LTR ERVL 80 333 -138 1267 132 59 0 chr18 45306292 45306511 -41371037 - L1PA10 LINE L1 -3 6165 5934 369 234 106 86 chr18 45306551 45306766 -41370782 + LTR18B LTR ERVL 1 194 -166 * 541 179 0 8 chr18 45306756 45306873 -41370675 + LTR18B LTR ERVL 486 601 -13 2422 206 6 13 chr18 45306883 45307532 -41370016 + HERVL18 LTR ERVL 4 715 -5332 2368 150 5 0 chr18 45307532 45307911 -41369637 + HERVL18 LTR ERVL 5294 5674 -373 247 330 93 57 chr18 45308441 45308880 -41368668 + L2 LINE L2 2198 2652 -662 922 191 6 0 chr18 45309457 45309619 -41367929 + LTR18B LTR ERVL 14 176 -438 282 95 0 0 chr18 45309656 45309698 -41367850 + LTR18B LTR ERVL 560 601 -13 1607 196 0 4 chr18 45309706 45309987 -41367561 + HERVL18 LTR ERVL 2 281 -5766 1645 223 3 0 chr18 45309994 45310322 -41367226 + HERVL18 LTR ERVL 633 961 -5086 1556 160 12 26 chr18 45310309 45310653 -41366895 + HERVL18 LTR ERVL 1383 1810 -4237 * 1202 129 64 2 chr18 45310652 45310912 -41366636 + HERVL18 LTR ERVL 2119 2452 -3595 * 2174 185 5 3 chr18 45310911 45311279 -41366269 + HERVL18 LTR ERVL 2720 3088 -2959 1117 215 161 46 chr18 45311280 45311797 -41365751 + LTR18B LTR ERVL 39 614 0 1001 320 98 7 chr18 45312829 45313388 -41364160 + L1ME1 LINE L1 2900 3509 -2637 1182 229 49 0 chr18 45313783 45313896 -41363652 + AluJb SINE Alu 1 107 -205 183 42 0 0 chr18 45313896 45313920 -41363628 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1182 229 49 0 chr18 45313920 45314072 -41363476 + AluJb SINE Alu 107 279 -33 228 280 0 0 chr18 45314874 45314924 -41362624 - L2 LINE L2 -12 3301 3252 473 232 14 0 chr18 45315138 45315276 -41362272 - L1MD3 LINE L1 -8 7987 7848 594 254 78 65 chr18 45315347 45315808 -41361740 + L1ME1 LINE L1 4018 4484 -1662 1905 233 64 65 chr18 45315892 45316004 -41361544 + L1ME1 LINE L1 5312 5423 -743 221 0 0 33 chr18 45316004 45316034 -41361514 + (TTAA)n Simple_repeat Simple_repeat 1 29 0 1905 233 64 65 chr18 45316034 45316776 -41360772 + L1ME1 LINE L1 5423 6165 -1 2242 107 7 0 chr18 45316779 45317088 -41360460 + AluY SINE Alu 1 311 0 296 322 67 11 chr18 45317305 45317395 -41360153 + L2 LINE L2 3191 3285 -28 256 415 23 6 chr18 45317703 45317879 -41359669 + L2 LINE L2 2665 2843 -471 603 213 168 29 chr18 45318567 45318876 -41358672 + MLT1B LTR MaLR 37 369 -98 * 715 162 37 0 chr18 45318873 45319009 -41358539 + MLT2A1 LTR ERVL 256 396 -48 21 0 0 0 chr18 45319010 45319031 -41358517 + AT_rich Low_complexity Low_complexity 1 21 0 261 83 146 0 chr18 45319046 45319094 -41358454 + MLT2A1 LTR ERVL 390 444 0 40077 93 5 2 chr18 45319096 45324727 -41352821 + HERVL-A1-A1 LTR ERVL 4 5654 0 2999 87 30 18 chr18 45324727 45325111 -41352437 + MLT2A1 LTR ERVL 1 392 -52 351 113 0 0 chr18 45325111 45325164 -41352384 + (TG)n Simple_repeat Simple_repeat 2 54 0 2999 87 30 18 chr18 45325164 45325218 -41352330 + MLT2A1 LTR ERVL 392 444 0 293 294 20 10 chr18 45326144 45326246 -41351302 + MIR SINE MIR 157 259 -3 373 265 138 51 chr18 45326289 45326485 -41351063 + MIR SINE MIR 5 217 -45 27 0 0 0 chr18 45327191 45327218 -41350330 + AT_rich Low_complexity Low_complexity 1 27 0 583 93 0 0 chr18 45327481 45327567 -41349981 + AluY SINE Alu 2 87 -224 9537 222 31 39 chr18 45328593 45332854 -41344694 - L1PA16 LINE L1 -9 7595 3288 1770 172 3 83 chr18 45332855 45333239 -41344309 - LTR10B LTR ERV1 0 547 195 9879 272 34 36 chr18 45333299 45336970 -41340578 - LTR10B-int LTR ERV1 -1 7784 4123 4194 279 13 7 chr18 45337014 45338423 -41339125 - LTR10B-int LTR ERV1 -3673 4112 988 239 295 0 0 chr18 45338431 45338492 -41339056 + LTR10B LTR ERV1 487 547 0 2245 217 45 37 chr18 45338611 45339547 -41338001 - LTR10B-int LTR ERV1 -5812 837 5 920 209 15 10 chr18 45339547 45339743 -41337805 - LTR10B LTR ERV1 0 547 351 731 110 0 25 chr18 45339743 45339861 -41337687 + L1PA5 LINE L1 6024 6138 -16 828 243 59 53 chr18 45339879 45340366 -41337182 - L1PA16 LINE L1 -4878 2696 2234 370 338 13 13 chr18 45340397 45340551 -41336997 - L1PA16 LINE L1 -6633 941 788 183 80 0 0 chr18 45340629 45340654 -41336894 + (TAA)n Simple_repeat Simple_repeat 2 26 0 24 0 0 0 chr18 45341338 45341362 -41336186 + AT_rich Low_complexity Low_complexity 1 24 0 580 233 41 20 chr18 45341943 45342089 -41335459 + MER5B DNA MER1_type 24 172 -6 329 291 66 71 chr18 45343230 45343287 -41334261 + MIR SINE MIR 68 124 -138 1642 169 49 33 chr18 45343287 45343654 -41333894 + THE1C LTR MaLR 1 373 -2 329 291 66 71 chr18 45343654 45343792 -41333756 + MIR SINE MIR 124 262 0 236 260 130 16 chr18 45343850 45343973 -41333575 + MIR SINE MIR 126 262 0 929 158 21 47 chr18 45344498 45344688 -41332860 + MER65A LTR ERV1 1 185 -260 465 90 0 39 chr18 45344701 45344779 -41332769 + MER65A LTR ERV1 371 445 0 377 224 20 31 chr18 45345215 45345313 -41332235 - L1ME LINE L1 -460 5661 5565 23 0 0 0 chr18 45345314 45345337 -41332211 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr18 45345806 45345836 -41331712 + AT_rich Low_complexity Low_complexity 1 30 0 279 0 0 0 chr18 45346018 45346049 -41331499 + (CATA)n Simple_repeat Simple_repeat 3 33 0 2320 68 7 3 chr18 45346376 45346671 -41330877 + AluY SINE Alu 1 296 -15 1897 148 42 22 chr18 45346791 45347150 -41330398 + MER47A DNA MER2_type 1 366 0 2162 189 46 22 chr18 45347650 45348106 -41329442 - MLT1C LTR MaLR 0 467 1 496 180 82 2 chr18 45348478 45348604 -41328944 + L1MB7 LINE L1 6037 6162 -2 2310 212 45 20 chr18 45348654 45349191 -41328357 - MER44D DNA MER2_type 0 605 1 208 270 79 11 chr18 45349420 45349509 -41328039 + L2 LINE L2 3174 3268 -4 225 261 80 11 chr18 45349875 45349963 -41327585 + L2 LINE L2 3174 3267 -5 324 363 112 14 chr18 45349987 45350210 -41327338 + MIR SINE MIR 18 262 0 1371 138 41 4 chr18 45351021 45351289 -41326259 + L1MA8 LINE L1 6011 6288 -3 26 74 0 0 chr18 45352261 45352315 -41325233 + AT_rich Low_complexity Low_complexity 1 54 0 1978 100 3 50 chr18 45352687 45353016 -41324532 + AluSq SINE Alu 1 315 0 2121 105 10 3 chr18 45353625 45353931 -41323617 - AluSc SINE Alu -1 308 1 25 0 0 0 chr18 45354232 45354257 -41323291 + AT_rich Low_complexity Low_complexity 1 25 0 392 345 45 80 chr18 45354497 45354920 -41322628 + L3 LINE CR1 1091 1498 -79 203 345 0 0 chr18 45356873 45356931 -41320617 - MER5A DNA MER1_type -4 185 128 464 147 0 0 chr18 45357010 45357078 -41320470 - AluS SINE Alu -243 70 3 23 78 0 0 chr18 45357134 45357185 -41320363 + AT_rich Low_complexity Low_complexity 1 51 0 524 226 0 24 chr18 45357434 45357558 -41319990 + FLAM_A SINE Alu 11 131 -11 385 330 88 36 chr18 45357645 45357951 -41319597 + L1MC/D LINE L1 5477 5798 -2010 189 0 0 0 chr18 45359085 45359106 -41318442 + (A)n Simple_repeat Simple_repeat 1 21 0 409 329 62 26 chr18 45359665 45360045 -41317503 - MLT1J LTR MaLR -25 486 47 322 245 49 39 chr18 45360108 45360210 -41317338 - HsTC2 DNA Tc2 -341 1557 1279 605 230 60 25 chr18 45360212 45360412 -41317136 - HsTC2 DNA Tc2 -1524 374 168 963 128 0 0 chr18 45360445 45360578 -41316970 + AluSg SINE Alu 1 133 -177 1923 112 21 11 chr18 45360578 45360863 -41316685 - THE1C LTR MaLR -87 288 1 260 313 25 6 chr18 45360868 45361031 -41316517 + (TG)n Simple_repeat Simple_repeat 1 166 0 1651 239 71 7 chr18 45361908 45362331 -41315217 + MLT1D LTR MaLR 5 454 -51 2297 83 29 0 chr18 45363010 45363322 -41314226 - L1PA7 LINE L1 -13 6141 5821 23 0 0 0 chr18 45363322 45363345 -41314203 + AT_rich Low_complexity Low_complexity 1 23 0 360 329 45 0 chr18 45363702 45363857 -41313691 - MIR3 SINE MIR -5 203 42 1707 219 52 41 chr18 45365957 45366068 -41311480 + MLT1C LTR MaLR 2 110 -357 3916 155 26 46 chr18 45366068 45366869 -41310679 - LTR1 LTR ERV1 0 785 1 1707 219 52 41 chr18 45366869 45367218 -41310330 + MLT1C LTR MaLR 110 467 0 22 0 0 0 chr18 45368023 45368045 -41309503 + AT_rich Low_complexity Low_complexity 1 22 0 8794 29 1 0 chr18 45369269 45370332 -41307216 - L1PA3 LINE L1 -839 5307 4244 7233 36 0 0 chr18 45370332 45371193 -41306355 + L1PA3 LINE L1 5291 6155 0 414 216 0 9 chr18 45371412 45371523 -41306025 + L1MA4 LINE L1 6179 6288 -12 187 354 35 14 chr18 45372122 45372266 -41305282 - MIR SINE MIR -6 256 110 442 319 0 22 chr18 45373131 45373313 -41304235 + GA-rich Low_complexity Low_complexity 2 179 0 2017 153 48 17 chr18 45373498 45373851 -41303697 - THE1B LTR MaLR 0 364 1 10900 123 8 1 chr18 45373851 45375421 -41302127 - THE1B-int LTR MaLR 0 1580 1 2049 138 51 23 chr18 45375421 45375775 -41301773 - THE1B LTR MaLR 0 364 1 2497 129 3 0 chr18 45376145 45376508 -41301040 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr18 45377082 45377102 -41300446 + (TG)n Simple_repeat Simple_repeat 2 21 0 29 78 0 0 chr18 45377682 45377746 -41299802 + AT_rich Low_complexity Low_complexity 1 64 0 16243 211 24 14 chr18 45377763 45382970 -41294578 - L1PA15 LINE L1 -13 7590 2319 645 270 22 89 chr18 45384270 45384614 -41292934 - L1PA15 LINE L1 -7188 393 80 1573 170 55 24 chr18 45384614 45384903 -41292645 - AluSg SINE Alu -12 298 1 645 270 22 89 chr18 45384903 45384973 -41292575 - L1PA15 LINE L1 -7501 80 7 252 269 43 21 chr18 45385035 45385128 -41292420 - MIR SINE MIR -74 134 40 239 288 0 0 chr18 45385448 45385521 -41292027 - MLT1J LTR MaLR -8 503 431 278 271 24 12 chr18 45385752 45385837 -41291711 + GA-rich Low_complexity Low_complexity 3 88 0 27 29 0 0 chr18 45386224 45386258 -41291290 + AT_rich Low_complexity Low_complexity 1 34 0 368 278 153 0 chr18 45388185 45388329 -41289219 - MIR SINE MIR 0 262 97 2492 255 126 64 chr18 45388811 45390170 -41287378 + L1MC4 LINE L1 6461 7903 -139 1546 208 55 3 chr18 45390297 45390609 -41286939 + Tigger7 DNA MER2_type 1 328 -2159 184 247 67 67 chr18 45390745 45390834 -41286714 - MIR SINE MIR -74 188 100 2006 154 19 35 chr18 45392031 45392401 -41285147 - THE1B LTR MaLR 0 364 1 361 226 165 9 chr18 45392816 45392931 -41284617 + MIR SINE MIR 2 134 -128 186 344 61 68 chr18 45393287 45393450 -41284098 + MIR3 SINE MIR 30 191 -17 277 98 0 59 chr18 45394102 45394153 -41283395 + MADE1 DNA Mariner 33 80 0 830 254 14 5 chr18 45395495 45395712 -41281836 - MIR SINE MIR -26 236 18 21 0 0 0 chr18 45395791 45395812 -41281736 + AT_rich Low_complexity Low_complexity 1 21 0 935 344 99 36 chr18 45397184 45398563 -41278985 + L2 LINE L2 1841 3313 0 638 264 81 36 chr18 45399115 45399422 -41278126 - MLT1K LTR MaLR -6 582 262 573 194 53 18 chr18 45399422 45399592 -41277956 + L1MA8 LINE L1 6086 6261 -30 982 284 92 32 chr18 45401316 45401752 -41275796 + LTR16B LTR ERVL 3 464 0 502 213 79 12 chr18 45401987 45402151 -41275397 + MER104 DNA Tc2 2 176 -4 645 253 197 11 chr18 45402818 45403087 -41274461 + LTR50 LTR ERVL 1 319 -476 442 276 63 23 chr18 45403140 45403314 -41274234 - MER63A DNA MER1_type -3 207 27 346 225 139 8 chr18 45403330 45403459 -41274089 + LTR50 LTR ERVL 647 792 -3 228 298 144 0 chr18 45403468 45403572 -41273976 + MIR SINE MIR 124 242 -20 920 200 40 5 chr18 45403669 45403869 -41273679 + MER20 DNA MER1_type 10 216 -3 195 42 0 0 chr18 45403928 45403952 -41273596 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1378 206 4 22 chr18 45403960 45404236 -41273312 - AluJo SINE Alu -41 271 1 21 0 0 0 chr18 45404236 45404257 -41273291 + AT_rich Low_complexity Low_complexity 1 21 0 209 29 0 57 chr18 45404311 45404346 -41273202 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 36 40 0 0 chr18 45405077 45405127 -41272421 + AT_rich Low_complexity Low_complexity 1 50 0 193 204 19 56 chr18 45405630 45405684 -41271864 - MIR SINE MIR -131 131 80 452 313 126 41 chr18 45405793 45406087 -41271461 - MLT1J LTR MaLR -45 466 148 1027 227 9 31 chr18 45406152 45406381 -41271167 - MER58A DNA MER1_type 0 224 1 1501 257 40 32 chr18 45406638 45407163 -41270385 + L1ME1 LINE L1 5633 6161 -5 195 42 0 0 chr18 45409709 45409733 -41267815 + (GA)n Simple_repeat Simple_repeat 1 24 0 308 281 20 92 chr18 45409812 45409965 -41267583 + MLT1K LTR MaLR 413 554 -34 1499 210 25 50 chr18 45409991 45410353 -41267195 - MLT1A1 LTR MaLR -12 353 1 2511 26 7 10 chr18 45410883 45411186 -41266362 + AluYb8 SINE Alu 9 310 -8 300 268 19 32 chr18 45411468 45411625 -41265923 + CT-rich Low_complexity Low_complexity 1 155 0 23 0 0 0 chr18 45411631 45411654 -41265894 + AT_rich Low_complexity Low_complexity 1 23 0 191 300 0 17 chr18 45412236 45412296 -41265252 - MIR SINE MIR -129 79 21 3913 201 65 19 chr18 45412948 45414514 -41263034 - MER52A LTR ERV1 0 1755 57 3355 116 10 17 chr18 45415430 45415948 -41261600 + MER75 DNA T2_type 1 514 0 21 57 0 0 chr18 45416981 45417016 -41260532 + AT_rich Low_complexity Low_complexity 1 35 0 490 368 34 47 chr18 45417331 45417711 -41259837 + L3 LINE CR1 1040 1414 -163 1670 167 12 99 chr18 45418713 45419139 -41258409 - MLT1B LTR MaLR 0 390 2 281 295 43 50 chr18 45419232 45419371 -41258177 - MIR3 SINE MIR -16 192 55 2308 54 0 0 chr18 45419496 45419800 -41257748 - AluY SINE Alu 0 304 1 325 323 99 37 chr18 45420215 45420376 -41257172 + L2 LINE L2 3102 3272 0 1709 140 0 87 chr18 45421053 45421374 -41256174 - MER4A LTR ERV1 0 664 372 513 133 89 0 chr18 45421425 45421515 -41256033 - MER4A LTR ERV1 -566 98 1 359 340 14 7 chr18 45421818 45421959 -41255589 + L1MEc LINE L1 109 250 -6146 * 2010 260 64 70 chr18 45421958 45422378 -41255170 + L1MEc LINE L1 1133 1554 -4661 2193 124 40 84 chr18 45422378 45422709 -41254839 + MER57B LTR ERV1 3 310 -124 2207 43 54 0 chr18 45422709 45422986 -41254562 - AluY SINE Alu -9 302 11 2193 124 40 84 chr18 45422986 45423106 -41254442 + MER57B LTR ERV1 310 434 0 2010 260 64 70 chr18 45423106 45425108 -41252440 + L1MEc LINE L1 1554 3419 -2796 2280 147 33 12 chr18 45425108 45425536 -41252012 - Tigger4(Zombi) DNA MER2_type 0 2731 2295 487 207 0 0 chr18 45425533 45425620 -41251928 - Tigger4(Zombi) DNA MER2_type -2644 87 1 * 3766 251 63 66 chr18 45425698 45425812 -41251736 + L1MEc LINE L1 3488 3601 -2614 723 38 0 28 chr18 45425812 45425918 -41251630 + (GGAA)n Simple_repeat Simple_repeat 4 106 0 3766 251 63 66 chr18 45425918 45427716 -41249832 + L1MEc LINE L1 3601 5394 -821 * 11146 217 29 17 chr18 45427712 45427749 -41249799 - L1PA13 LINE L1 -2241 4556 4521 884 117 172 6 chr18 45427749 45427912 -41249636 - MER30B DNA MER1_type 0 190 1 11146 217 29 17 chr18 45427912 45431326 -41246222 - L1PA13 LINE L1 -2276 4521 1043 445 237 73 50 chr18 45431326 45431549 -41245999 + L1ME2 LINE L1 5193 5407 -743 949 257 224 26 chr18 45431549 45431969 -41245579 + MLT1D LTR MaLR 3 505 0 501 242 66 16 chr18 45431969 45432151 -41245397 + L1ME2 LINE L1 5407 5597 -567 415 196 28 119 chr18 45432169 45432312 -41245236 + L1ME2 LINE L1 6034 6166 0 578 258 126 0 chr18 45432346 45432536 -41245012 + L1ME2 LINE L1 5942 6155 -9 26 0 0 0 chr18 45432536 45432562 -41244986 + AT_rich Low_complexity Low_complexity 1 26 0 25 0 0 0 chr18 45432584 45432609 -41244939 + AT_rich Low_complexity Low_complexity 1 25 0 1004 216 0 0 chr18 45432732 45432926 -41244622 - L1PB4 LINE L1 -24 6132 5939 320 337 66 12 chr18 45433483 45433649 -41243899 + MIR SINE MIR 71 245 -17 299 300 69 126 chr18 45433984 45434215 -41243333 + L2 LINE L2 2155 2398 -916 255 31 0 0 chr18 45434215 45434247 -41243301 + (TG)n Simple_repeat Simple_repeat 2 33 0 299 300 69 126 chr18 45434247 45434756 -41242792 + L2 LINE L2 2398 2853 -461 25 51 0 0 chr18 45435265 45435304 -41242244 + AT_rich Low_complexity Low_complexity 1 39 0 6562 80 5 0 chr18 45436469 45437786 -41239762 - L1PA8 LINE L1 -2 6170 4837 306 309 99 40 chr18 45437791 45437992 -41239556 + L1MEc LINE L1 1614 1826 -4570 860 24 67 5 chr18 45438162 45438373 -41239175 + (TA)n Simple_repeat Simple_repeat 1 224 0 236 221 190 13 chr18 45438380 45438538 -41239010 + L1MEc LINE L1 2102 2287 -4109 298 338 35 0 chr18 45438543 45438774 -41238774 + L1MEc LINE L1 3361 3599 -2616 306 328 72 8 chr18 45438817 45438942 -41238606 + L1MEc LINE L1 4265 4397 -1818 1807 277 77 30 chr18 45438944 45440217 -41237331 + L1MEc LINE L1 4886 6215 -24 8671 40 0 1 chr18 45440446 45441511 -41236037 - L1P LINE L1 -1228 4918 3855 6932 53 16 1 chr18 45441511 45442575 -41234973 + L1PA5 LINE L1 5069 6148 -6 414 57 0 0 chr18 45442575 45442628 -41234920 + (TA)n Simple_repeat Simple_repeat 2 54 0 28 0 0 0 chr18 45443254 45443282 -41234266 + AT_rich Low_complexity Low_complexity 1 28 0 214 250 0 40 chr18 45443498 45443574 -41233974 + (CATA)n Simple_repeat Simple_repeat 4 76 0 * 362 225 17 28 chr18 45443521 45443693 -41233855 + (TA)n Simple_repeat Simple_repeat 2 172 0 243 0 0 0 chr18 45443693 45443720 -41233828 + (CA)n Simple_repeat Simple_repeat 2 28 0 2274 94 0 3 chr18 45444305 45444613 -41232935 - AluSq SINE Alu -6 307 1 27 49 0 0 chr18 45445499 45445540 -41232008 + AT_rich Low_complexity Low_complexity 1 41 0 26 64 0 0 chr18 45445589 45445636 -41231912 + AT_rich Low_complexity Low_complexity 1 47 0 406 231 66 25 chr18 45446766 45446887 -41230661 - MIR SINE MIR -70 192 67 191 35 0 35 chr18 45447472 45447501 -41230047 + (TTA)n Simple_repeat Simple_repeat 3 30 0 228 219 18 44 chr18 45448231 45448321 -41229227 + (TAAA)n Simple_repeat Simple_repeat 4 92 -22 1608 204 7 0 chr18 45448321 45448600 -41228948 + AluJb SINE Alu 1 281 -31 228 219 18 44 chr18 45448600 45448623 -41228925 + (TAAA)n Simple_repeat Simple_repeat 92 114 0 317 215 37 15 chr18 45448635 45448770 -41228778 + (TTATA)n Simple_repeat Simple_repeat 2 139 0 183 283 19 19 chr18 45449650 45449703 -41227845 - MIR SINE MIR -135 73 21 233 358 60 15 chr18 45450980 45451114 -41226434 - MIR3 SINE MIR -2 206 67 254 295 18 54 chr18 45451322 45451434 -41226114 + MIR SINE MIR 42 149 -59 446 208 135 124 chr18 45451457 45451525 -41226023 + MER5A DNA MER1_type 10 76 -113 2596 58 0 0 chr18 45451525 45451836 -41225712 + AluY SINE Alu 1 311 0 446 208 135 124 chr18 45451836 45451945 -41225603 + MER5A DNA MER1_type 76 189 0 228 257 46 73 chr18 45453046 45453155 -41224393 - MER117 DNA MER1_type -37 160 55 24 53 0 0 chr18 45453390 45453428 -41224120 + AT_rich Low_complexity Low_complexity 1 38 0 2532 199 71 15 chr18 45453526 45454120 -41223428 + L1MB8 LINE L1 5551 6177 -1 183 129 0 0 chr18 45454385 45454416 -41223132 + (TC)n Simple_repeat Simple_repeat 2 32 0 191 286 67 94 chr18 45455026 45455281 -41222267 - L2 LINE L2 -914 2400 2153 353 242 0 63 chr18 45455322 45455417 -41222131 + L1MC4 LINE L1 6615 6703 -1339 413 217 0 22 chr18 45455421 45455513 -41222035 + L1MC4 LINE L1 6614 6703 -1339 313 282 0 29 chr18 45455465 45455568 -41221980 - L1MC4 LINE L1 -1335 6707 6608 * 1188 184 80 28 chr18 45456821 45457147 -41220401 + LTR37A LTR ERV1 84 426 0 353 326 14 22 chr18 45457445 45457583 -41219965 + MLT1J LTR MaLR 59 195 -316 282 225 60 66 chr18 45457676 45457827 -41219721 + MLT1J2 LTR MaLR 258 558 -57 1542 176 37 11 chr18 45458233 45458506 -41219042 + AluJo SINE Alu 1 280 -32 22 0 0 0 chr18 45458892 45458914 -41218634 + AT_rich Low_complexity Low_complexity 1 22 0 1185 161 97 19 chr18 45460855 45461165 -41216383 + LTR37A LTR ERV1 93 426 0 535 215 0 101 chr18 45461177 45461326 -41216222 + MER58B DNA MER1_type 204 337 -4 14723 135 20 12 chr18 45461939 45464335 -41213213 - Tigger1 DNA MER2_type -2 2416 1 386 309 130 8 chr18 45464825 45464948 -41212600 - L2 LINE L2 -1 3271 3134 2302 226 31 12 chr18 45465176 45465684 -41211864 + MLT2B1 LTR ERVL 1 518 -2 426 316 38 0 chr18 45466017 45466150 -41211398 - MIR SINE MIR -117 145 8 333 0 0 0 chr18 45466223 45466260 -41211288 + (CA)n Simple_repeat Simple_repeat 1 37 0 297 302 75 0 chr18 45466622 45466728 -41210820 + MIR SINE MIR 72 185 -77 1877 185 16 12 chr18 45467968 45468406 -41209142 + L1MB8 LINE L1 5214 5650 -534 12451 40 3 0 chr18 45468592 45470937 -41206611 + L1PA5 LINE L1 3794 6152 -2 1815 220 27 19 chr18 45470944 45471422 -41206126 + L1MB8 LINE L1 5663 6144 -34 453 211 23 39 chr18 45471483 45471611 -41205937 - MER39 LTR ERV1 0 707 582 367 132 0 10 chr18 45471757 45471822 -41205726 + Alu SINE Alu 1 51 -252 1467 116 0 0 chr18 45471822 45472020 -41205528 + AluSg/x SINE Alu 90 287 -22 1217 144 59 0 chr18 45472028 45472264 -41205284 + L1MA8 LINE L1 6038 6287 -4 487 201 5 144 chr18 45472436 45472630 -41204918 - MER39 LTR ERV1 -114 593 427 306 272 87 0 chr18 45472635 45472727 -41204821 + L2 LINE L2 3214 3313 0 234 0 0 0 chr18 45473082 45473108 -41204440 + (TG)n Simple_repeat Simple_repeat 2 27 0 1164 222 89 32 chr18 45474354 45474910 -41202638 - LTR29 LTR ERV1 -2 729 22 1012 171 4 81 chr18 45474909 45475143 -41202405 - MLT1B LTR MaLR -173 217 2 * 2833 166 18 0 chr18 45475620 45476073 -41201475 - LTR24 LTR ERV1 0 467 7 580 198 9 0 chr18 45476098 45476214 -41201334 - LTR24-int LTR ERV1 0 5123 5007 2153 115 47 47 chr18 45476264 45476628 -41200920 - THE1B LTR MaLR 0 364 1 1822 123 43 84 chr18 45476925 45477316 -41200232 - THE1C LTR MaLR 0 375 1 654 331 37 11 chr18 45477365 45477637 -41199911 - LTR24-int LTR ERV1 -437 6685 6407 5973 106 13 8 chr18 45478182 45479921 -41197627 + L1PA8 LINE L1 4388 6159 -13 260 160 0 0 chr18 45479973 45480023 -41197525 - MLT2A2 LTR ERVL 0 444 395 3009 100 12 2 chr18 45480067 45480476 -41197072 - MLT2A2 LTR ERVL -40 413 1 473 338 61 44 chr18 45482181 45482726 -41194822 - LTR24-int LTR ERV1 -2836 4920 3374 271 275 54 54 chr18 45482844 45483011 -41194537 - LTR24-int LTR ERV1 -4402 4024 3858 1444 218 88 97 chr18 45483628 45484187 -41193361 - MLT2B3 LTR ERVL 0 554 1 27 29 0 0 chr18 45484593 45484627 -41192921 + AT_rich Low_complexity Low_complexity 1 34 0 241 79 0 0 chr18 45484627 45484665 -41192883 - L1PA16 LINE L1 -2 6164 6127 234 0 0 0 chr18 45485923 45485949 -41191599 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 501 299 153 26 chr18 45486216 45486524 -41191024 - LTR24-int LTR ERV1 -6065 693 347 361 200 0 12 chr18 45486554 45486634 -41190914 - LTR24-int LTR ERV1 -4471 652 574 223 170 0 0 chr18 45486646 45486693 -41190855 + T-rich Low_complexity Low_complexity 1 47 0 970 251 25 28 chr18 45486693 45487123 -41190425 - LTR24-int LTR ERV1 -4551 572 1 2324 167 48 48 chr18 45487124 45487584 -41189964 - LTR24 LTR ERV1 -1 466 7 395 295 81 7 chr18 45488011 45488160 -41189388 + MIR SINE MIR 14 173 -89 333 175 10 41 chr18 45488331 45488428 -41189120 + L1MC5 LINE L1 7832 7925 -36 922 299 48 33 chr18 45488996 45489509 -41188039 - L2 LINE L2 -19 3294 2723 26 74 0 0 chr18 45490313 45490367 -41187181 + AT_rich Low_complexity Low_complexity 1 54 0 2046 130 3 10 chr18 45490788 45491089 -41186459 + AluSx SINE Alu 3 301 -11 594 285 95 45 chr18 45492264 45492343 -41185205 + MER63A DNA MER1_type 1 75 -1613 907 222 12 118 chr18 45492343 45492749 -41184799 - MLT1A1 LTR MaLR -2 363 1 594 285 95 45 chr18 45492749 45492869 -41184679 + MER63A DNA MER1_type 75 210 0 306 349 46 26 chr18 45494406 45494601 -41182947 + MIR SINE MIR 4 202 -60 230 292 34 11 chr18 45494607 45494696 -41182852 - LTR67 LTR ERVL -7 550 460 2181 114 0 3 chr18 45495182 45495479 -41182069 - AluSq SINE Alu -17 296 1 636 80 7 133 chr18 45495983 45496051 -41181497 + L1PA15 LINE L1 6017 6057 -108 2042 145 51 14 chr18 45496051 45496402 -41181146 + THE1B LTR MaLR 1 364 0 636 80 7 133 chr18 45496402 45496484 -41181064 + L1PA15 LINE L1 6057 6148 -17 273 258 42 58 chr18 45496487 45496607 -41180941 - L1ME3A LINE L1 -127 6043 5926 340 302 126 40 chr18 45496894 45497172 -41180376 - HERVL LTR ERVL -3137 2517 2216 22 0 0 0 chr18 45498736 45498758 -41178790 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr18 45498938 45498966 -41178582 + AT_rich Low_complexity Low_complexity 1 28 0 502 237 30 23 chr18 45498976 45499107 -41178441 + L1MDa LINE L1 96 227 -6313 495 190 166 18 chr18 45499105 45499268 -41178280 + L1MDa LINE L1 1151 1337 -5203 * 3200 197 63 110 chr18 45499432 45500865 -41176683 + L1MDa LINE L1 1332 2689 -3851 357 24 0 0 chr18 45500865 45500907 -41176641 + (TA)n Simple_repeat Simple_repeat 2 43 0 3200 197 63 110 chr18 45500907 45500959 -41176589 + L1MDa LINE L1 2689 2742 -3798 4649 194 15 5 chr18 45500961 45501920 -41175628 + L1MA5A LINE L1 4017 4984 -1162 2274 89 115 0 chr18 45501947 45502285 -41175263 - MER51B LTR ERV1 0 377 1 7966 156 40 25 chr18 45502287 45504308 -41173240 - MER51B-int LTR ERV1 0 7816 5757 1584 111 100 7 chr18 45504308 45504664 -41172884 - LTR6A-int LTR ERV1 -2574 2643 2210 1954 190 63 22 chr18 45504675 45505133 -41172415 - LTR6A-int LTR ERV1 -3262 1955 1479 * 5080 123 79 23 chr18 45505111 45506003 -41171545 - LTR6A-int LTR ERV1 -4489 3327 2376 432 0 0 0 chr18 45506003 45506051 -41171497 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 5080 123 79 23 chr18 45506051 45506123 -41171425 - LTR6A-int LTR ERV1 -5440 2376 2309 3313 161 28 6 chr18 45506115 45506999 -41170549 - LTR6A-int LTR ERV1 -6558 1258 194 * 1997 194 35 89 chr18 45506999 45507649 -41169899 - LTR6A LTR ERV1 0 564 1 1503 67 16 0 chr18 45507650 45507843 -41169705 - MER51B-int LTR ERV1 -7620 196 1 2291 99 102 0 chr18 45507843 45508185 -41169363 - MER51B LTR ERV1 0 377 1 5938 163 28 6 chr18 45508185 45509462 -41168086 + L1MA5A LINE L1 4992 6295 -2 896 282 60 10 chr18 45509500 45509915 -41167633 + L1M4 LINE L1 2366 2801 -3345 * 1540 275 152 9 chr18 45509909 45510454 -41167094 + L1MD2 LINE L1 5723 6345 -14 3775 192 31 11 chr18 45510945 45511504 -41166044 + L1MC2 LINE L1 5175 5766 -578 1365 198 124 9 chr18 45511504 45511706 -41165842 + MLT1B LTR MaLR 1 178 -212 315 0 0 0 chr18 45511706 45511741 -41165807 + (CA)n Simple_repeat Simple_repeat 1 35 0 1365 198 124 9 chr18 45511741 45511886 -41165662 + MLT1B LTR MaLR 178 388 -2 3775 192 31 11 chr18 45511886 45512166 -41165382 + L1MC2 LINE L1 5766 6039 -305 1166 212 34 71 chr18 45512229 45512583 -41164965 + L1MC2 LINE L1 5994 6334 -10 1531 230 52 3 chr18 45512741 45513089 -41164459 - MLT1A1 LTR MaLR 0 365 1 233 311 11 11 chr18 45513329 45513419 -41164129 + CT-rich Low_complexity Low_complexity 5 94 0 1934 199 5 24 chr18 45514504 45514886 -41162662 + MSTD LTR MaLR 20 394 -2 27 49 0 0 chr18 45515522 45515563 -41161985 + AT_rich Low_complexity Low_complexity 1 41 0 21 36 0 0 chr18 45515951 45515979 -41161569 + AT_rich Low_complexity Low_complexity 1 28 0 512 211 0 0 chr18 45516656 45516751 -41160797 - L1M2 LINE L1 -4216 2633 2539 * 1057 318 66 12 chr18 45516749 45517171 -41160377 - L1M2 LINE L1 -6390 459 15 2670 222 32 59 chr18 45517381 45518349 -41159199 + L1M4c LINE L1 2218 3175 -3207 487 151 0 0 chr18 45518362 45518448 -41159100 + L1PB4 LINE L1 5537 5622 -681 354 175 0 0 chr18 45518450 45518507 -41159041 + AluS SINE Alu 1 57 -244 1170 156 0 0 chr18 45518615 45518794 -41158754 + AluSc SINE Alu 117 295 -14 1873 207 87 26 chr18 45518795 45519258 -41158290 + L1PB4 LINE L1 5609 6107 -49 1708 160 91 23 chr18 45519258 45519608 -41157940 + THE1C LTR MaLR 1 374 -1 1873 207 87 26 chr18 45519608 45519652 -41157896 + L1PB4 LINE L1 6107 6147 -9 5272 153 24 10 chr18 45519664 45520626 -41156922 + L1MA5A LINE L1 5320 6294 -3 28 0 0 0 chr18 45521378 45521406 -41156142 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr18 45521530 45521566 -41155982 + AT_rich Low_complexity Low_complexity 1 36 0 288 0 0 0 chr18 45521821 45521853 -41155695 + (A)n Simple_repeat Simple_repeat 1 32 0 367 361 39 0 chr18 45522156 45522311 -41155237 - MIR SINE MIR -61 201 41 2086 116 20 0 chr18 45522420 45522712 -41154836 - AluSx SINE Alu -14 298 1 267 223 48 0 chr18 45522967 45523070 -41154478 + (TA)n Simple_repeat Simple_repeat 2 109 0 775 130 9 0 chr18 45523090 45523205 -41154343 - MSTB LTR MaLR 0 428 313 1172 214 113 77 chr18 45523205 45523648 -41153900 - LTR1B LTR ERV1 0 826 368 822 86 0 8 chr18 45523648 45523765 -41153783 - L1P1 LINE L1 -351 5804 5689 606 76 0 0 chr18 45523738 45523817 -41153731 + L1PA5 LINE L1 6067 6145 -9 * 1179 114 0 0 chr18 45523826 45524093 -41153455 + (TA)n Simple_repeat Simple_repeat 1 267 0 1104 215 91 44 chr18 45524093 45524456 -41153092 - LTR1B LTR ERV1 -446 380 1 * 1735 145 41 28 chr18 45524456 45524766 -41152782 - MSTB LTR MaLR -112 314 1 555 290 7 0 chr18 45524766 45524911 -41152637 - MIR SINE MIR -99 163 18 400 368 40 6 chr18 45525072 45525246 -41152302 + MIR SINE MIR 13 192 -70 208 180 0 40 chr18 45526025 45526075 -41151473 + A-rich Low_complexity Low_complexity 3 50 0 1110 208 112 8 chr18 45526925 45527291 -41150257 - LTR37A LTR ERV1 -4 422 19 792 246 13 48 chr18 45527656 45527884 -41149664 - MER89 LTR ERV1 -13 546 327 1757 166 106 0 chr18 45527887 45528207 -41149341 + MER46B DNA MER2_type 1 229 -7 264 245 0 0 chr18 45528208 45528261 -41149287 - MER89 LTR ERV1 -245 314 262 2123 174 86 29 chr18 45528261 45528869 -41148679 + MER39 LTR ERV1 7 695 -12 571 232 0 4 chr18 45528869 45529052 -41148496 - MER89 LTR ERV1 -313 246 2 7912 237 47 18 chr18 45529054 45530987 -41146561 - MER89-int LTR ERV1 -1 6800 4812 1649 224 33 66 chr18 45530987 45531469 -41146079 + MLT1D LTR MaLR 40 505 0 307 265 24 12 chr18 45531469 45531552 -41145996 - MER89-int LTR ERV1 -5444 1357 1274 513 264 0 0 chr18 45531599 45531709 -41145839 - MER89-int LTR ERV1 -5518 1283 1174 1820 271 67 90 chr18 45531715 45532813 -41144735 - MER89-int LTR ERV1 -5729 1072 1 1450 243 88 7 chr18 45532813 45533233 -41144315 - MER89 LTR ERV1 0 559 6 955 249 112 4 chr18 45533318 45533595 -41143953 + MER92B LTR ERV1 283 589 -47 228 100 0 0 chr18 45534610 45534650 -41142898 + (T)n Simple_repeat Simple_repeat 1 40 0 911 168 11 42 chr18 45534796 45534986 -41142562 + MER34C LTR ERV1 37 220 -365 * 6372 156 16 62 chr18 45534980 45535396 -41142152 - HSMAR2 DNA Mariner -68 1234 800 2266 125 0 0 chr18 45535396 45535708 -41141840 - AluSq SINE Alu -1 312 1 6372 156 16 62 chr18 45535708 45535988 -41141560 - HSMAR2 DNA Mariner -502 800 509 1821 152 7 3 chr18 45535988 45536284 -41141264 + AluSx SINE Alu 13 309 -3 6372 156 16 62 chr18 45536284 45536879 -41140669 - HSMAR2 DNA Mariner -793 509 2 517 151 47 9 chr18 45536879 45536985 -41140563 + MER34C LTR ERV1 468 577 -8 728 175 0 16 chr18 45537101 45537227 -41140321 - FLAM_C SINE Alu -7 126 3 2834 199 131 3 chr18 45537312 45537939 -41139609 - MER39 LTR ERV1 0 707 1 271 274 28 19 chr18 45538661 45538767 -41138781 - L1M4 LINE L1 -1317 4829 4723 627 284 58 34 chr18 45538928 45538965 -41138583 + MIR SINE MIR 27 62 -200 2151 227 75 0 chr18 45538965 45539485 -41138063 - MER89 LTR ERV1 0 559 1 627 284 58 34 chr18 45539485 45539655 -41137893 + MIR SINE MIR 62 239 -23 22 35 0 0 chr18 45539703 45539732 -41137816 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr18 45539869 45539896 -41137652 + AT_rich Low_complexity Low_complexity 1 27 0 232 341 15 0 chr18 45540046 45540181 -41137367 - L1M4 LINE L1 -2097 4049 3913 370 296 321 25 chr18 45540275 45540518 -41137030 + L2 LINE L2 2343 2657 -657 359 293 14 70 chr18 45540756 45540971 -41136577 + L1MC/D LINE L1 4354 4556 -1590 25 0 0 0 chr18 45541497 45541522 -41136026 + AT_rich Low_complexity Low_complexity 1 25 0 551 314 76 19 chr18 45541621 45542096 -41135452 + L1MC/D LINE L1 5301 5802 -2006 1885 127 13 27 chr18 45542477 45542777 -41134771 + AluSg SINE Alu 1 296 -14 1814 220 19 8 chr18 45542942 45543319 -41134229 - MSTC LTR MaLR 0 428 48 235 301 96 15 chr18 45543489 45543761 -41133787 + L1MC/D LINE L1 3872 4165 -1981 24086 167 24 17 chr18 45543970 45549797 -41127751 + L1PA10 LINE L1 634 6482 -1 27 0 0 0 chr18 45549951 45549978 -41127570 + AT_rich Low_complexity Low_complexity 1 27 0 510 235 93 40 chr18 45550069 45550260 -41127288 - MER33 DNA MER1_type -2261 324 110 2243 91 3 0 chr18 45550260 45550558 -41126990 + AluSg SINE Alu 1 299 -11 510 235 93 40 chr18 45550558 45550668 -41126880 - MER33 DNA MER1_type -2475 110 7 2105 121 0 0 chr18 45550914 45551196 -41126352 + AluSx SINE Alu 6 287 -25 471 305 61 77 chr18 45551259 45551866 -41125682 + L1MC/D LINE L1 4626 5222 -924 319 334 64 29 chr18 45551912 45552226 -41125322 + L1MC/D LINE L1 5313 5637 -2171 21 57 0 0 chr18 45552331 45552366 -41125182 + AT_rich Low_complexity Low_complexity 1 35 0 472 178 173 47 chr18 45552384 45552598 -41124950 + L1MC5 LINE L1 7677 7917 -44 1972 110 55 0 chr18 45552724 45553016 -41124532 - AluSx SINE Alu -2 310 3 1892 255 90 29 chr18 45554651 45555432 -41122116 - L1M4 LINE L1 -1949 4197 3370 445 173 108 58 chr18 45555490 45555629 -41121919 + LTR45B LTR ERV1 344 489 0 310 111 270 0 chr18 45555945 45556008 -41121540 + MADE1 DNA Mariner 1 80 0 341 251 30 113 chr18 45556008 45556239 -41121309 - L1MC5 LINE L1 -83 7878 7667 1069 281 61 63 chr18 45556728 45557536 -41120012 - L1MC4a LINE L1 -1668 6140 5335 555 128 0 0 chr18 45558589 45558675 -41118873 + L1PA8 LINE L1 6082 6167 -5 308 346 49 39 chr18 45558918 45559123 -41118425 + MIR SINE MIR 53 259 -3 2019 112 35 0 chr18 45559124 45559411 -41118137 + AluSq SINE Alu 1 297 -16 25 0 0 0 chr18 45559972 45559997 -41117551 + AT_rich Low_complexity Low_complexity 1 25 0 1842 193 3 46 chr18 45560131 45560519 -41117029 - MLT1B LTR MaLR -12 378 8 644 299 5 16 chr18 45561412 45561599 -41115949 + MIR SINE MIR 58 242 -20 841 224 19 0 chr18 45562151 45562307 -41115241 - FAM SINE Alu -16 159 1 261 210 0 0 chr18 45562530 45562592 -41114956 + (TA)n Simple_repeat Simple_repeat 1 62 0 429 323 123 14 chr18 45563362 45563582 -41113966 - L2 LINE L2 -789 2525 2282 336 138 175 12 chr18 45563683 45563763 -41113785 - MER97c DNA MER1_type? -940 150 58 850 315 94 37 chr18 45563792 45564385 -41113163 - L2 LINE L2 -1019 2295 1669 266 364 75 26 chr18 45564542 45564770 -41112778 + MIR SINE MIR 6 244 -18 198 0 0 0 chr18 45564875 45564897 -41112651 + (TG)n Simple_repeat Simple_repeat 2 23 0 421 293 61 16 chr18 45564950 45565261 -41112287 + L1M4 LINE L1 3943 4267 -1879 1531 133 0 0 chr18 45565282 45565520 -41112028 + AluSg/x SINE Alu 65 302 0 498 261 121 65 chr18 45567049 45567355 -41110193 + MER5C DNA MER1_type 1 323 -1 2153 190 2 2 chr18 45567894 45568294 -41109254 + L1PA15 LINE L1 5764 6163 -2 1561 212 3 3 chr18 45568311 45568597 -41108951 + AluJo SINE Alu 1 289 -23 186 43 0 0 chr18 45568597 45568620 -41108928 + (TTAA)n Simple_repeat Simple_repeat 2 24 0 1561 212 3 3 chr18 45568620 45568639 -41108909 + AluJo SINE Alu 288 306 -6 4330 156 56 30 chr18 45568765 45569150 -41108398 - MER4D LTR ERV1 -35 868 494 2210 111 0 3 chr18 45569150 45569456 -41108092 + AluY SINE Alu 1 305 -6 4330 156 56 30 chr18 45569456 45569916 -41107632 - MER4D LTR ERV1 -409 494 1 570 153 18 0 chr18 45569916 45570027 -41107521 + L1MB3 LINE L1 6071 6183 0 910 228 128 87 chr18 45570043 45570395 -41107153 + MLT2B1 LTR ERVL 1 372 -42 446 0 0 18 chr18 45570395 45570450 -41107098 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 910 228 128 87 chr18 45570450 45570487 -41107061 + MLT2B1 LTR ERVL 372 406 -8 1035 153 0 6 chr18 45570499 45570676 -41106872 - L1P LINE L1 -2237 3909 3734 5850 139 45 9 chr18 45570680 45572140 -41105408 + L1PA14 LINE L1 4644 6161 0 401 278 48 45 chr18 45572494 45572828 -41104720 + L1M4 LINE L1 3631 3965 -2181 1021 86 0 7 chr18 45572832 45572971 -41104577 + AluY SINE Alu 155 292 -19 220 255 0 0 chr18 45573008 45573059 -41104489 + (TG)n Simple_repeat Simple_repeat 2 52 0 225 338 41 15 chr18 45573242 45573582 -41103966 + L1M4 LINE L1 4181 4529 -1617 226 289 19 70 chr18 45573905 45574061 -41103487 + L1M4 LINE L1 4900 5047 -1099 21 0 0 0 chr18 45574090 45574111 -41103437 + AT_rich Low_complexity Low_complexity 1 21 0 547 318 23 33 chr18 45574128 45574342 -41103206 + MER20 DNA MER1_type 2 213 -6 253 212 61 81 chr18 45574468 45574567 -41102981 + L1M LINE L1 5255 5351 -2457 4837 26 3 0 chr18 45574742 45575312 -41102236 - L1PA4 LINE L1 -190 5965 5394 212 273 0 60 chr18 45575323 45575506 -41102042 + A-rich Low_complexity Low_complexity 3 174 0 223 219 27 27 chr18 45577345 45577418 -41100130 + (ACCG)n Simple_repeat Simple_repeat 4 76 0 227 273 0 52 chr18 45580606 45580683 -41096865 + CT-rich Low_complexity Low_complexity 2 74 0 23 33 0 0 chr18 45580929 45580959 -41096589 + AT_rich Low_complexity Low_complexity 1 30 0 289 259 0 0 chr18 45584866 45584947 -41092601 + (CAA)n Simple_repeat Simple_repeat 3 83 0 958 283 101 41 chr18 45587391 45588348 -41089200 + L1MEc LINE L1 791 1718 -4497 723 153 0 0 chr18 45588886 45589010 -41088538 + L1PA15 LINE L1 6040 6163 -2 2512 264 52 26 chr18 45589114 45589906 -41087642 - L1M4 LINE L1 -5392 1150 339 189 74 0 0 chr18 45589966 45589993 -41087555 + (TCC)n Simple_repeat Simple_repeat 2 28 0 1375 234 0 0 chr18 45589993 45590267 -41087281 - AluJo SINE Alu -34 278 5 557 220 24 152 chr18 45590276 45590572 -41086976 - L1M4 LINE L1 -6283 259 2 201 267 17 0 chr18 45590631 45590691 -41086857 + (TATATG)n Simple_repeat Simple_repeat 6 66 0 23 0 0 0 chr18 45591503 45591526 -41086022 + AT_rich Low_complexity Low_complexity 1 23 0 33 25 0 0 chr18 45591630 45591670 -41085878 + AT_rich Low_complexity Low_complexity 1 40 0 641 218 8 0 chr18 45591772 45591896 -41085652 + MLT1B LTR MaLR 1 125 -265 271 215 241 0 chr18 45591923 45592002 -41085546 + MIR SINE MIR 50 147 -115 23 68 0 0 chr18 45592210 45592254 -41085294 + AT_rich Low_complexity Low_complexity 1 44 0 1543 211 35 35 chr18 45592291 45592429 -41085119 - MLT1A2 LTR MaLR 0 374 237 2266 165 21 21 chr18 45592429 45592854 -41084694 + MSTB LTR MaLR 1 425 -1 1543 211 35 35 chr18 45592854 45593089 -41084459 - MLT1A2 LTR MaLR -136 238 1 946 293 58 27 chr18 45593114 45593632 -41083916 - MER90 LTR ERV1 -15 560 69 192 152 0 0 chr18 45593646 45593679 -41083869 + CT-rich Low_complexity Low_complexity 2 34 0 202 182 0 0 chr18 45594875 45594908 -41082640 + (CA)n Simple_repeat Simple_repeat 2 34 0 29 60 0 0 chr18 45597443 45597493 -41080055 + AT_rich Low_complexity Low_complexity 1 50 0 1115 207 8 28 chr18 45597684 45597935 -41079613 - LTR53 LTR ERVL 0 519 274 1446 226 144 9 chr18 45598184 45598621 -41078927 + LTR54B LTR ERV1 1 496 -2 2278 104 0 19 chr18 45598779 45599095 -41078453 + AluSg SINE Alu 1 310 0 4326 259 61 24 chr18 45599280 45600957 -41076591 + L1MC3 LINE L1 2619 4357 -1789 2114 207 150 66 chr18 45600955 45601793 -41075755 + L1MC3 LINE L1 5215 5364 -782 * 8251 171 13 4 chr18 45601801 45602489 -41075059 - L1PA11 LINE L1 0 6174 5494 2044 121 10 10 chr18 45602489 45602796 -41074752 - AluSc SINE Alu -2 307 1 8251 171 13 4 chr18 45602796 45604450 -41073098 - L1PA11 LINE L1 -680 5494 3815 5908 170 7 12 chr18 45604453 45605570 -41071978 + L1PA11 LINE L1 2706 3817 -2329 3334 215 134 77 chr18 45605570 45606503 -41071045 + L1MC3 LINE L1 6121 7223 -562 260 275 38 0 chr18 45606503 45606583 -41070965 + MLT1F1 LTR MaLR 51 133 -434 3334 215 134 77 chr18 45606583 45606847 -41070701 + L1MC3 LINE L1 7223 7470 -315 3944 144 77 3 chr18 45606851 45607537 -41070011 + Tigger1 DNA MER2_type 1682 2418 0 345 346 21 8 chr18 45607828 45608064 -41069484 + LTR16A1 LTR ERVL 18 255 -195 1073 242 26 78 chr18 45608159 45608544 -41069004 + MLT1A1 LTR MaLR 1 365 0 1621 184 21 10 chr18 45610517 45610916 -41066632 - MER61D LTR ERV1 0 501 1 614 316 109 3 chr18 45611169 45611463 -41066085 + L2 LINE L2 2377 2701 -613 322 362 21 0 chr18 45612136 45612277 -41065271 - MIR3 SINE MIR -21 187 44 184 306 35 47 chr18 45613511 45613596 -41063952 + MIR SINE MIR 58 141 -121 205 267 0 0 chr18 45616164 45616209 -41061339 + GA-rich Low_complexity Low_complexity 2 46 0 261 318 11 13 chr18 45618567 45618671 -41058877 + MIR SINE MIR 34 137 -71 2408 90 0 3 chr18 45619095 45619405 -41058143 + AluSc SINE Alu 1 309 0 1660 180 35 7 chr18 45619968 45620257 -41057291 + AluJb SINE Alu 3 299 -13 266 130 0 37 chr18 45621117 45621171 -41056377 + (CATATA)n Simple_repeat Simple_repeat 1 52 0 252 303 33 42 chr18 45621596 45621762 -41055786 - MIR SINE MIR -62 146 33 28 0 0 0 chr18 45623139 45623167 -41054381 + AT_rich Low_complexity Low_complexity 1 28 0 1986 177 43 40 chr18 45623569 45624118 -41053430 - MLT2A2 LTR ERVL 0 554 1 2620 19 0 7 chr18 45624377 45624684 -41052864 + AluY SINE Alu 1 305 -6 233 228 0 18 chr18 45624934 45624991 -41052557 - L2 LINE L2 -3 3310 3255 24 0 0 0 chr18 45626905 45626929 -41050619 + AT_rich Low_complexity Low_complexity 1 24 0 1195 255 102 33 chr18 45627133 45627688 -41049860 - LTR29 LTR ERV1 0 622 1 283 287 102 37 chr18 45628072 45628180 -41049368 - MIR SINE MIR -63 145 31 316 185 0 0 chr18 45628781 45628835 -41048713 - MER115 DNA AcHobo 0 693 640 540 380 83 11 chr18 45628979 45629245 -41048303 - MER115 DNA AcHobo -406 287 3 351 252 215 9 chr18 45629512 45629619 -41047929 + MER5A DNA MER1_type 61 189 0 301 329 51 0 chr18 45629719 45629856 -41047692 + L1MDa LINE L1 2461 2604 -3936 237 341 59 0 chr18 45629970 45630055 -41047493 + L2 LINE L2 3224 3313 0 229 135 39 0 chr18 45630957 45631009 -41046539 + (TA)n Simple_repeat Simple_repeat 1 54 0 334 238 70 63 chr18 45631232 45631375 -41046173 + L1MDa LINE L1 2461 2604 -3936 1539 98 20 16 chr18 45631565 45631810 -41045738 - L1PB2 LINE L1 -2 6149 5904 257 253 105 0 chr18 45631817 45631912 -41045636 + L1MDa LINE L1 2838 2942 -3598 26 30 0 0 chr18 45632045 45632078 -41045470 + AT_rich Low_complexity Low_complexity 1 33 0 566 224 14 21 chr18 45632203 45632346 -41045202 + MER46A DNA MER2_type 1 142 -94 2751 145 19 9 chr18 45632349 45632719 -41044829 + MER46A DNA MER2_type 2263 2628 -103 192 40 0 0 chr18 45632719 45632744 -41044804 + (TC)n Simple_repeat Simple_repeat 2 26 0 2751 145 19 9 chr18 45632744 45632758 -41044790 + MER46A DNA MER2_type 2628 161 -2570 324 102 0 0 chr18 45632758 45632807 -41044741 + (CA)n Simple_repeat Simple_repeat 2 50 0 2751 145 19 9 chr18 45632807 45632884 -41044664 + MER46A DNA MER2_type 160 235 -1 238 232 32 21 chr18 45632884 45632979 -41044569 + L1MDa LINE L1 3266 3361 -3179 402 296 90 29 chr18 45632986 45633047 -41044501 + L1MDa LINE L1 3479 3535 -3005 2115 126 0 0 chr18 45633047 45633348 -41044200 + AluSx SINE Alu 1 301 -11 402 296 90 29 chr18 45633348 45633665 -41043883 + L1MDa LINE L1 3535 3880 -2660 774 296 125 13 chr18 45633713 45634315 -41043233 + L1MDa LINE L1 3971 4639 -1901 434 287 100 47 chr18 45634420 45634720 -41042828 + L1MB8 LINE L1 2667 2982 -3164 379 297 116 0 chr18 45634720 45634858 -41042690 + LTR41 LTR ERVL 1 154 -619 701 251 34 89 chr18 45635098 45635389 -41042159 + LTR41 LTR ERVL 498 772 -1 522 235 69 35 chr18 45635538 45635798 -41041750 + L1MB8 LINE L1 3821 4089 -2057 287 267 0 52 chr18 45635849 45635965 -41041583 + L1MB8 LINE L1 5122 5231 -915 196 194 41 6 chr18 45635982 45636152 -41041396 + (TA)n Simple_repeat Simple_repeat 1 176 0 863 283 71 27 chr18 45636176 45637014 -41040534 + L1MB8 LINE L1 5254 6159 -11 184 326 59 96 chr18 45637157 45637395 -41040153 - L2 LINE L2 -1274 2040 1816 2082 126 3 7 chr18 45637395 45637704 -41039844 + AluSc SINE Alu 1 308 -1 184 326 59 96 chr18 45637704 45637787 -41039761 - L2 LINE L2 -1498 1816 1731 309 26 0 0 chr18 45637982 45638020 -41039528 + (TG)n Simple_repeat Simple_repeat 1 38 0 10406 189 80 31 chr18 45638219 45642448 -41035100 - L1 LINE L1 -2740 4825 17 457 230 11 0 chr18 45642456 45642543 -41035005 - MER2 DNA MER2_type -251 94 7 28 0 0 0 chr18 45642638 45642666 -41034882 + AT_rich Low_complexity Low_complexity 1 28 0 357 238 30 20 chr18 45643015 45643116 -41034432 - LTR41 LTR ERVL -583 190 89 393 321 89 21 chr18 45643272 45643462 -41034086 - L2 LINE L2 -1650 1664 1462 484 182 83 55 chr18 45643615 45643796 -41033752 - MER53 DNA DNA -1 188 3 2172 116 8 91 chr18 45644744 45645067 -41032481 + THE1B LTR MaLR 1 349 -15 2274 119 3 0 chr18 45645067 45645377 -41032171 - AluSp SINE Alu -2 311 1 2158 139 0 7 chr18 45645377 45645687 -41031861 - AluSx SINE Alu -4 308 1 2172 116 8 91 chr18 45645687 45645759 -41031789 + THE1B LTR MaLR 347 364 0 455 283 76 30 chr18 45645857 45646320 -41031228 + L1MB8 LINE L1 4363 4846 -1300 1272 252 21 22 chr18 45646478 45646552 -41030996 + L1MB8 LINE L1 5716 5789 -389 1895 182 49 35 chr18 45646552 45646980 -41030568 - Tigger2a DNA MER2_type 0 434 1 1272 252 21 22 chr18 45646980 45647323 -41030225 + L1MB8 LINE L1 5789 6129 -49 303 188 0 62 chr18 45647320 45647416 -41030132 + L1MB7 LINE L1 6090 6179 -5 * 679 291 65 37 chr18 45647646 45648035 -41029513 + L1ME3A LINE L1 5262 5708 -454 2864 185 37 2 chr18 45648035 45648548 -41029000 + LTR26B LTR ERV1 1 531 0 679 291 65 37 chr18 45648548 45648844 -41028704 + L1ME3A LINE L1 5708 5994 -168 417 254 23 60 chr18 45648872 45649005 -41028543 + MER34 LTR ERV1 2 145 -397 261 276 66 44 chr18 45649112 45649240 -41028308 + MER34B LTR ERV1 281 416 -149 1680 203 42 14 chr18 45649240 45649595 -41027953 - MLT1A1 LTR MaLR 0 365 1 261 276 66 44 chr18 45649595 45649647 -41027901 + MER34B LTR ERV1 416 465 -100 332 235 110 0 chr18 45649721 45649857 -41027691 + L1ME3A LINE L1 6011 6161 -9 1826 225 61 15 chr18 45650787 45651244 -41026304 + MLT2B1 LTR ERVL 1 478 -42 250 250 0 0 chr18 45651245 45651313 -41026235 + (TA)n Simple_repeat Simple_repeat 1 68 0 322 113 0 0 chr18 45651316 45651369 -41026179 + MLT2B1 LTR ERVL 461 513 -2 2149 103 3 7 chr18 45651455 45651792 -41025756 + AluY SINE Alu 1 311 0 2060 138 7 3 chr18 45651804 45652109 -41025439 + AluSx SINE Alu 1 306 -6 746 256 33 9 chr18 45652784 45652995 -41024553 + MLT1J LTR MaLR 3 218 -293 233 330 44 0 chr18 45653052 45653143 -41024405 + MLT1J LTR MaLR 271 365 -146 2300 146 74 22 chr18 45653276 45653681 -41023867 + MSTC LTR MaLR 3 428 0 374 259 58 35 chr18 45653681 45653855 -41023693 + MIR SINE MIR 85 262 0 464 268 99 52 chr18 45654472 45654685 -41022863 - MIR SINE MIR 0 262 40 253 286 143 15 chr18 45654811 45654944 -41022604 + L2 LINE L2 3164 3313 0 234 329 0 0 chr18 45654992 45655071 -41022477 + (CA)n Simple_repeat Simple_repeat 1 79 0 23 0 0 0 chr18 45655221 45655244 -41022304 + AT_rich Low_complexity Low_complexity 1 23 0 1003 215 0 4 chr18 45656484 45656721 -41020827 - L1 LINE L1 -1096 5050 4815 * 3352 125 15 2 chr18 45656719 45657402 -41020146 + L1PB1 LINE L1 5102 5791 -360 328 175 0 136 chr18 45657444 45657547 -41020001 + L1MC4 LINE L1 6614 6702 -1340 239 65 0 0 chr18 45657589 45657635 -41019913 - LTR66 LTR ERVL -171 439 394 2296 98 3 0 chr18 45659953 45660248 -41017300 + AluSp SINE Alu 1 296 -17 277 150 0 0 chr18 45660437 45660477 -41017071 + Alu SINE Alu 1 40 -262 369 0 0 0 chr18 45662142 45662183 -41015365 + (TA)n Simple_repeat Simple_repeat 2 42 0 2470 116 0 0 chr18 45662190 45662553 -41014995 + L1PB1 LINE L1 5789 6151 0 580 257 88 51 chr18 45662940 45663005 -41014543 - MLT1F LTR MaLR -7 535 474 435 101 0 63 chr18 45663005 45663084 -41014464 + MADE1 DNA Mariner 4 77 -3 580 257 88 51 chr18 45663084 45663314 -41014234 - MLT1F LTR MaLR -68 474 229 467 264 69 29 chr18 45663340 45663514 -41014034 - MLT1F LTR MaLR -414 181 1 614 261 219 0 chr18 45664231 45664446 -41013102 + MIR SINE MIR 1 262 0 292 352 63 14 chr18 45665172 45665314 -41012234 - MIR SINE MIR -79 183 35 201 237 0 0 chr18 45665794 45665832 -41011716 + MIR SINE MIR 220 257 -5 1531 144 5 0 chr18 45665973 45666195 -41011353 + AluSg/x SINE Alu 78 300 -12 1197 186 66 21 chr18 45668480 45668814 -41008734 - L1MC2 LINE L1 -1 6343 5995 2173 96 0 17 chr18 45668818 45669110 -41008438 - AluSg SINE Alu -18 292 6 25 0 0 0 chr18 45669356 45669381 -41008167 + AT_rich Low_complexity Low_complexity 1 25 0 205 315 0 19 chr18 45669685 45669739 -41007809 + MIR SINE MIR 15 67 -195 185 91 0 30 chr18 45670250 45670283 -41007265 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1117 177 25 96 chr18 45672253 45672342 -41005206 - L1 LINE L1 -1430 4716 4622 2418 173 13 11 chr18 45672342 45672794 -41004754 - L1PA16 LINE L1 -16 6150 5698 644 179 0 0 chr18 45672794 45672900 -41004648 - U6 snRNA snRNA 0 107 2 1117 177 25 96 chr18 45672900 45673205 -41004343 - L1 LINE L1 -1522 4624 4349 261 0 0 0 chr18 45673755 45673784 -41003764 + (GA)n Simple_repeat Simple_repeat 2 30 0 626 290 76 35 chr18 45674788 45675208 -41002340 - L1MEd LINE L1 -1088 5041 4640 207 0 0 0 chr18 45675208 45675231 -41002317 + (CA)n Simple_repeat Simple_repeat 2 24 0 626 290 76 35 chr18 45675231 45675635 -41001913 - L1MEd LINE L1 -1489 4640 4183 1035 231 4 9 chr18 45675635 45675860 -41001688 - AluJo SINE Alu -21 291 68 35035 90 11 8 chr18 45676137 45682258 -40995290 + L1PA6 LINE L1 11 6146 -8 2053 124 6 29 chr18 45682263 45682578 -40994970 + AluSx SINE Alu 1 308 -4 252 276 38 19 chr18 45682902 45683007 -40994541 - L1MEd LINE L1 -2503 3626 3520 615 305 91 32 chr18 45683012 45683386 -40994162 - L1MEd LINE L1 -2678 3451 3056 231 305 51 25 chr18 45683505 45683741 -40993807 - L1MEd LINE L1 -3245 2884 2643 234 173 0 67 chr18 45683803 45683878 -40993670 + (TTTA)n Simple_repeat Simple_repeat 3 72 0 728 340 42 49 chr18 45683884 45684457 -40993091 - L1MEd LINE L1 -5000 1119 551 344 339 34 34 chr18 45684885 45685062 -40992486 + L2 LINE L2 3137 3313 0 261 365 101 0 chr18 45685369 45685517 -40992031 - L2 LINE L2 -2 3311 3149 194 298 0 0 chr18 45685651 45685698 -40991850 - MIR SINE MIR -4 258 212 2337 100 0 0 chr18 45685729 45686038 -40991510 - AluSc SINE Alu 0 309 1 271 338 68 8 chr18 45686137 45686270 -40991278 - MIR SINE MIR -121 141 1 207 0 0 0 chr18 45686772 45686795 -40990753 + (TTA)n Simple_repeat Simple_repeat 2 24 0 324 174 0 58 chr18 45687643 45687712 -40989836 + MER5B DNA MER1_type 77 141 -37 250 196 0 175 chr18 45687823 45687920 -40989628 - MER5B DNA MER1_type -3 175 96 6920 69 35 0 chr18 45689957 45690958 -40986590 - L1PA8 LINE L1 -1 6171 5164 529 224 20 122 chr18 45691949 45692171 -40985377 + MLT1D LTR MaLR 31 234 -233 1561 199 43 24 chr18 45692178 45692554 -40984994 + MLT1B LTR MaLR 1 383 -7 446 278 28 28 chr18 45692562 45692738 -40984810 + MLT1D LTR MaLR 286 461 -6 234 91 0 0 chr18 45693133 45693166 -40984382 + (TG)n Simple_repeat Simple_repeat 2 34 0 2142 113 24 0 chr18 45694906 45695197 -40982351 + AluSc SINE Alu 1 298 -11 806 212 90 31 chr18 45695214 45695273 -40982275 + AluJb SINE Alu 65 119 -193 189 107 0 0 chr18 45695273 45695301 -40982247 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 806 212 90 31 chr18 45695301 45695463 -40982085 + AluJb SINE Alu 119 299 -13 416 268 59 26 chr18 45696465 45696618 -40980930 - MIR3 SINE MIR -21 187 30 1953 214 68 67 chr18 45696776 45697903 -40979645 + L1ME2 LINE L1 5024 6155 -9 318 332 144 10 chr18 45698144 45698364 -40979184 - MIR SINE MIR -8 254 4 1776 153 142 11 chr18 45698423 45698796 -40978752 + MSTA LTR MaLR 7 428 0 1012 25 0 0 chr18 45699003 45699124 -40978424 + L1PA2 LINE L1 6034 6154 -1 210 258 55 117 chr18 45699503 45699631 -40977917 - L2 LINE L2 -1 3312 3193 24 32 0 0 chr18 45700577 45700608 -40976940 + AT_rich Low_complexity Low_complexity 1 31 0 2926 208 48 27 chr18 45700962 45701783 -40975765 - L1MDa LINE L1 -4443 2097 1260 321 304 104 17 chr18 45701850 45701965 -40975583 - L1MDa LINE L1 -5658 882 758 1683 227 59 95 chr18 45701980 45702216 -40975332 - L1MDa LINE L1 -5960 580 337 463 154 0 0 chr18 45702216 45702294 -40975254 + MADE1 DNA Mariner 3 80 0 1683 227 59 95 chr18 45702294 45702634 -40974914 - L1MDa LINE L1 -6203 337 25 28 48 0 0 chr18 45702689 45702731 -40974817 + AT_rich Low_complexity Low_complexity 1 42 0 347 260 65 41 chr18 45703029 45703152 -40974396 + MER91B DNA MER1_type 5 130 -60 237 347 0 0 chr18 45703163 45703238 -40974310 + MER91B DNA MER1_type 89 163 -27 244 314 57 9 chr18 45704529 45704634 -40972914 - L2 LINE L2 -17 3296 3187 193 414 9 0 chr18 45705519 45705630 -40971918 - L2 LINE L2 -1018 2296 2185 341 329 97 36 chr18 45705648 45705880 -40971668 + MIR SINE MIR 26 262 0 191 363 120 40 chr18 45705936 45706789 -40970759 - L2 LINE L2 -1223 2091 1171 1236 207 70 53 chr18 45708285 45708570 -40968978 + AluJo SINE Alu 1 290 -12 25 0 0 0 chr18 45709540 45709565 -40967983 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr18 45711195 45711218 -40966330 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr18 45711284 45711313 -40966235 + AT_rich Low_complexity Low_complexity 1 29 0 270 328 57 30 chr18 45711375 45711637 -40965911 + HAL1b LINE L1 406 674 -674 9162 30 0 0 chr18 45711927 45713817 -40963731 + L1PA3 LINE L1 4277 6167 0 238 159 29 0 chr18 45713829 45713898 -40963650 + A-rich Low_complexity Low_complexity 2 72 0 22 0 0 0 chr18 45714018 45714040 -40963508 + AT_rich Low_complexity Low_complexity 1 22 0 2895 3 0 0 chr18 45714113 45714424 -40963124 + AluYa5 SINE Alu 1 311 0 2189 56 0 0 chr18 45714441 45714693 -40962855 + AluY SINE Alu 1 252 -59 303 292 53 18 chr18 45715215 45715328 -40962220 + L2 LINE L2 3184 3300 -13 453 277 63 46 chr18 45715510 45715813 -40961735 + L1ME4a LINE L1 5542 5849 -272 225 204 0 0 chr18 45716349 45716393 -40961155 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 204 97 0 0 chr18 45717277 45717308 -40960240 + (CA)n Simple_repeat Simple_repeat 2 32 0 260 307 58 61 chr18 45717653 45717979 -40959569 + LTR33A LTR ERVL 1 325 -198 645 38 0 0 chr18 45718831 45718911 -40958637 + (TTTTC)n Simple_repeat Simple_repeat 1 80 0 981 114 29 0 chr18 45718912 45719087 -40958461 + CT-rich Low_complexity Low_complexity 1 180 0 612 189 5 141 chr18 45719112 45719297 -40958251 - FRAM SINE Alu -7 169 10 273 339 57 51 chr18 45720168 45720345 -40957203 + MIR SINE MIR 34 211 -51 1548 239 68 12 chr18 45720391 45720805 -40956743 - MER74A LTR ERVL 0 558 122 197 362 69 9 chr18 45721382 45721498 -40956050 + L2 LINE L2 2678 2800 -514 250 356 77 58 chr18 45721596 45721908 -40955640 + L2 LINE L2 2889 3206 -66 312 330 55 90 chr18 45721968 45722168 -40955380 + L2 LINE L2 3034 3226 -46 311 378 26 19 chr18 45724188 45724344 -40953204 - MIR3 SINE MIR -14 194 38 201 340 0 58 chr18 45726157 45726260 -40951288 + MIR SINE MIR 94 190 -72 243 0 0 0 chr18 45726370 45726397 -40951151 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1667 124 68 0 chr18 45726417 45726666 -40950882 - AluSg SINE Alu -44 266 1 288 280 0 27 chr18 45726771 45726846 -40950702 + L2 LINE L2 3232 3304 -9 226 263 0 0 chr18 45726922 45726979 -40950569 - MLT1I LTR MaLR -2 407 351 315 275 50 17 chr18 45727230 45727350 -40950198 - MLT1I LTR MaLR -276 133 10 435 320 61 78 chr18 45727585 45728010 -40949538 + L2 LINE L2 2881 3298 -15 938 185 19 57 chr18 45728091 45728302 -40949246 - MER58A DNA MER1_type 0 224 22 303 296 91 0 chr18 45728413 45728545 -40949003 + MIR SINE MIR 106 249 -13 388 277 79 35 chr18 45729739 45729941 -40947607 - L1ME4a LINE L1 0 6121 5911 7284 48 1 3 chr18 45731089 45731992 -40945556 + L1PA5 LINE L1 5254 6154 0 1574 135 43 4 chr18 45732003 45732284 -40945264 + L1MA6 LINE L1 6003 6294 -6 303 305 54 45 chr18 45732443 45732774 -40944774 - L1ME4a LINE L1 -226 5895 5562 493 214 0 0 chr18 45732785 45732869 -40944679 + AluJ/FLAM SINE Alu 5 88 -224 190 147 29 0 chr18 45732958 45732992 -40944556 + MIR SINE MIR 223 257 -5 278 357 27 0 chr18 45733311 45733423 -40944125 + MIR SINE MIR 29 143 -119 957 288 90 28 chr18 45735181 45735605 -40941943 + LTR16A LTR ERVL 1 450 0 3889 219 85 77 chr18 45735942 45736083 -40941465 - L1MD3 LINE L1 -5 8037 7899 225 0 0 0 chr18 45736083 45736108 -40941440 + (TC)n Simple_repeat Simple_repeat 2 26 0 3889 219 85 77 chr18 45736108 45737487 -40940061 - L1MD3 LINE L1 -143 7899 6522 919 219 89 24 chr18 45737490 45737736 -40939812 - MLT1A2 LTR MaLR -4 370 109 1409 262 58 42 chr18 45737755 45738525 -40939023 - L1MC4a LINE L1 -1323 6485 5703 277 314 88 40 chr18 45738549 45739365 -40938183 - L1MC4a LINE L1 -1128 5018 4164 35 0 0 0 chr18 45739715 45739750 -40937798 + AT_rich Low_complexity Low_complexity 1 35 0 553 187 173 7 chr18 45740063 45740202 -40937346 - MER58A DNA MER1_type -15 209 48 250 276 52 26 chr18 45740269 45740385 -40937163 - HAL1b LINE L1 -773 575 457 26 82 0 0 chr18 45741352 45741413 -40936135 + AT_rich Low_complexity Low_complexity 1 61 0 2141 139 38 13 chr18 45741498 45741937 -40935611 + Tigger2 DNA MER2_type 1 2718 0 251 304 20 10 chr18 45741937 45742035 -40935513 - MER94 DNA DNA -35 99 1 2015 204 3 0 chr18 45742528 45742915 -40934633 - L1MB5 LINE L1 -6 6168 5781 461 195 0 0 chr18 45742915 45742992 -40934556 + Tigger4(Zombi) DNA MER2_type 2 78 -2653 * 4803 147 37 11 chr18 45742979 45743636 -40933912 + Tigger4(Zombi) DNA MER2_type 1859 2544 -187 2329 200 37 11 chr18 45743636 45744100 -40933448 - MER66A LTR ERV1 -2 476 1 4803 147 37 11 chr18 45744100 45744290 -40933258 + Tigger4(Zombi) DNA MER2_type 2544 2728 -3 343 246 0 27 chr18 45744292 45744402 -40933146 - L1MB5 LINE L1 -390 5784 5678 272 333 90 6 chr18 45745667 45745823 -40931725 + MIR SINE MIR 14 182 -80 2662 154 29 2 chr18 45746211 45746664 -40930884 - LTR24 LTR ERV1 -2 465 1 2645 168 48 37 chr18 45746874 45747416 -40930132 - MER34C LTR ERV1 -3 582 35 2747 196 78 17 chr18 45747438 45748100 -40929448 - MER44D DNA MER2_type 0 705 3 180 0 0 0 chr18 45749270 45749290 -40928258 + (TA)n Simple_repeat Simple_repeat 1 20 0 14166 38 9 1 chr18 45749290 45751778 -40925770 - L1PA4 LINE L1 -19 6136 3635 337 279 16 16 chr18 45751849 45751978 -40925570 + CT-rich Low_complexity Low_complexity 2 130 0 397 280 179 23 chr18 45752138 45752395 -40925153 + L2 LINE L2 1464 1760 -1554 724 311 110 74 chr18 45752406 45753210 -40924338 + L2 LINE L2 2477 3308 -5 27 49 0 0 chr18 45753210 45753251 -40924297 + AT_rich Low_complexity Low_complexity 1 41 0 313 323 114 30 chr18 45755250 45755417 -40922131 + MIR3 SINE MIR 23 203 -5 242 351 64 21 chr18 45755579 45755673 -40921875 - L2 LINE L2 -27 3245 3148 25 0 0 0 chr18 45755769 45755794 -40921754 + AT_rich Low_complexity Low_complexity 1 25 0 299 253 0 21 chr18 45755798 45755893 -40921655 - MER103 DNA DNA -63 103 11 376 258 116 58 chr18 45757095 45757370 -40920178 - LTR37A LTR ERV1 -3 423 133 794 220 77 64 chr18 45757991 45758535 -40919013 - LTR48 LTR ERV1 0 787 1 1634 11 0 0 chr18 45758726 45758909 -40918639 - L1P1 LINE L1 -547 5608 5426 * 3434 5 0 0 chr18 45758905 45759291 -40918257 + L1HS LINE L1 5768 6153 -2 216 0 0 0 chr18 45759294 45759318 -40918230 + (A)n Simple_repeat Simple_repeat 1 24 0 2315 92 7 0 chr18 45759344 45759639 -40917909 - AluSq SINE Alu -14 299 3 231 175 0 0 chr18 45760324 45760381 -40917167 + (TG)n Simple_repeat Simple_repeat 1 57 0 667 330 59 15 chr18 45761028 45761352 -40916196 - LTR40b LTR ERVL -2 460 123 3442 242 66 32 chr18 45761353 45762627 -40914921 + L1ME1 LINE L1 3949 5336 -830 1905 138 7 3 chr18 45762627 45762916 -40914632 + AluSx SINE Alu 1 290 -22 3442 242 66 32 chr18 45762916 45763770 -40913778 + L1ME1 LINE L1 5336 6160 -6 325 283 65 36 chr18 45763820 45763958 -40913590 - LTR50 LTR ERVL -636 159 18 2204 96 10 3 chr18 45764071 45764374 -40913174 + AluSq SINE Alu 1 305 -8 348 367 204 22 chr18 45764840 45765164 -40912384 + L3 LINE CR1 1176 1558 -19 1626 201 0 0 chr18 45766167 45766441 -40911107 - AluJb SINE Alu -33 279 6 1095 55 0 0 chr18 45767280 45767408 -40910140 - AluY SINE Alu -122 189 62 1323 159 26 4 chr18 45767413 45767640 -40909908 + MSTB LTR MaLR 195 426 0 267 168 46 6 chr18 45767767 45767940 -40909608 + (TA)n Simple_repeat Simple_repeat 1 180 0 263 210 72 6 chr18 45767951 45768118 -40909430 + (TA)n Simple_repeat Simple_repeat 2 179 0 23 33 0 0 chr18 45768820 45768850 -40908698 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr18 45769140 45769172 -40908376 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr18 45770585 45770613 -40906935 + AT_rich Low_complexity Low_complexity 1 28 0 468 0 0 0 chr18 45772006 45772058 -40905490 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 207 250 0 0 chr18 45772058 45772102 -40905446 + (TG)n Simple_repeat Simple_repeat 1 44 0 1206 233 35 0 chr18 45772107 45772365 -40905183 - MER68 LTR ERV1 0 562 296 465 240 70 16 chr18 45772354 45772483 -40905065 - MER68 LTR ERV1 -424 138 3 * 30 45 0 0 chr18 45772493 45772537 -40905011 + AT_rich Low_complexity Low_complexity 1 44 0 564 309 95 21 chr18 45772547 45772832 -40904716 - L2 LINE L2 0 3313 3008 358 291 60 0 chr18 45772840 45772957 -40904591 - L2 LINE L2 -1366 1948 1825 2012 125 7 0 chr18 45773428 45773715 -40903833 - AluSx SINE Alu -16 296 8 1933 153 93 23 chr18 45773787 45774185 -40903363 - MSTA LTR MaLR 0 428 3 484 290 97 7 chr18 45774499 45774644 -40902904 - MIR SINE MIR -59 203 46 393 22 0 0 chr18 45776452 45776498 -40901050 + (TG)n Simple_repeat Simple_repeat 1 46 0 597 113 47 9 chr18 45777020 45777126 -40900422 + L1PA13 LINE L1 6054 6163 0 287 352 19 0 chr18 45777259 45777364 -40900184 + MIR SINE MIR 33 139 -123 222 228 30 99 chr18 45778090 45778191 -40899357 + MIR SINE MIR 106 199 -63 2113 74 0 4 chr18 45778253 45778522 -40899026 + AluSq SINE Alu 37 304 -9 1921 14 0 14 chr18 45778682 45778905 -40898643 + AluYb8 SINE Alu 98 317 -1 351 308 49 17 chr18 45779433 45779576 -40897972 + MIR SINE MIR 45 191 -64 434 308 51 6 chr18 45780045 45780201 -40897347 + MIR SINE MIR 29 191 -71 2184 92 0 36 chr18 45780468 45780772 -40896776 + AluSg SINE Alu 1 293 -17 23 0 0 0 chr18 45780888 45780911 -40896637 + AT_rich Low_complexity Low_complexity 1 23 0 1121 154 9 79 chr18 45780920 45781147 -40896401 - MLT1D LTR MaLR 0 505 295 23 0 0 0 chr18 45781792 45781815 -40895733 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 45782607 45782628 -40894920 + AT_rich Low_complexity Low_complexity 1 21 0 2081 126 0 0 chr18 45783508 45783794 -40893754 + AluSx SINE Alu 3 288 -24 221 0 0 33 chr18 45783797 45783827 -40893721 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 455 290 131 28 chr18 45784003 45784217 -40893331 - MIR SINE MIR 0 262 27 2410 91 0 3 chr18 45784417 45784724 -40892824 - AluSg SINE Alu -3 307 2 2900 285 79 24 chr18 45784768 45786197 -40891351 - L1MEc LINE L1 -4829 1567 60 2713 293 134 26 chr18 45786209 45786509 -40891039 - L2 LINE L2 -965 2349 2083 2317 97 0 3 chr18 45786509 45786818 -40890730 + AluSg SINE Alu 1 308 -2 2713 293 134 26 chr18 45786818 45787744 -40889804 - L2 LINE L2 -1231 2083 990 203 196 0 43 chr18 45787786 45787832 -40889716 - MIR SINE MIR -36 226 183 * 212 378 0 0 chr18 45787830 45787920 -40889628 - L2 LINE L2 -2347 967 878 499 179 271 26 chr18 45787945 45788096 -40889452 - MER5A DNA MER1_type -1 188 1 23 33 0 0 chr18 45788568 45788598 -40888950 + AT_rich Low_complexity Low_complexity 1 30 0 783 214 52 33 chr18 45788931 45789141 -40888407 + MER58A DNA MER1_type 8 221 -3 209 244 0 0 chr18 45789558 45789599 -40887949 - L2 LINE L2 -17 3296 3256 428 279 27 18 chr18 45789957 45790068 -40887480 - L2 LINE L2 -1 3271 3160 457 274 97 8 chr18 45790468 45790592 -40886956 - MIR3 SINE MIR -9 199 65 578 354 9 9 chr18 45791389 45791615 -40885933 + MIR SINE MIR 36 261 -1 2361 152 28 30 chr18 45792626 45793053 -40884495 + MSTB LTR MaLR 1 426 0 6175 211 57 45 chr18 45793053 45794615 -40882933 + MSTB-int LTR MaLR 1 1580 0 2088 184 56 19 chr18 45794615 45795028 -40882520 + MSTA LTR MaLR 1 428 0 593 300 143 24 chr18 45795161 45795686 -40881862 + L2 LINE L2 2707 3269 -44 23 0 0 0 chr18 45795708 45795731 -40881817 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr18 45795748 45795770 -40881778 + AT_rich Low_complexity Low_complexity 1 22 0 1768 196 11 14 chr18 45795985 45796348 -40881200 - MLT1A1 LTR MaLR 0 365 4 255 152 65 0 chr18 45796447 45796493 -40881055 - U6 snRNA snRNA -58 49 1 234 339 18 0 chr18 45796799 45796855 -40880693 + L2 LINE L2 3205 3261 -11 396 0 0 0 chr18 45797713 45797757 -40879791 + (TG)n Simple_repeat Simple_repeat 2 45 0 204 97 0 0 chr18 45798010 45798041 -40879507 + (ATG)n Simple_repeat Simple_repeat 2 32 0 1516 189 0 25 chr18 45798259 45798534 -40879014 + AluJo SINE Alu 1 268 -44 180 0 0 0 chr18 45798599 45798619 -40878929 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 290 70 23 0 chr18 45799762 45799805 -40877743 + MADE1 DNA Mariner 3 46 -34 195 42 0 0 chr18 45799853 45799877 -40877671 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 295 392 80 5 chr18 45800414 45800613 -40876935 + L2 LINE L2 2514 2727 -587 21 0 0 0 chr18 45800628 45800649 -40876899 + AT_rich Low_complexity Low_complexity 1 21 0 2069 109 0 16 chr18 45800684 45800987 -40876561 - AluSc SINE Alu -11 298 1 1472 213 54 20 chr18 45802812 45803165 -40874383 + MLT1A1 LTR MaLR 1 365 0 327 125 42 0 chr18 45803234 45803306 -40874242 + (TA)n Simple_repeat Simple_repeat 2 76 0 315 311 16 0 chr18 45803356 45803478 -40874070 + (CATATA)n Simple_repeat Simple_repeat 2 125 0 220 274 0 0 chr18 45803547 45803609 -40873939 + (CTA)n Simple_repeat Simple_repeat 1 62 0 308 358 56 0 chr18 45804581 45804743 -40872805 - MIR3 SINE MIR -2 206 36 228 301 7 7 chr18 45805168 45805304 -40872244 + (TA)n Simple_repeat Simple_repeat 2 137 0 1541 195 0 34 chr18 45806245 45806542 -40871006 - AluJo SINE Alu -25 287 1 555 158 0 0 chr18 45806997 45807092 -40870456 - AluSg/x SINE Alu -20 289 195 508 291 45 22 chr18 45807234 45807457 -40870091 - MIR SINE MIR -1 261 34 261 57 0 0 chr18 45807971 45808006 -40869542 + (CA)n Simple_repeat Simple_repeat 1 35 0 722 238 35 30 chr18 45808116 45808347 -40869201 - MER106A DNA MER1_type -4 232 1 23 33 0 0 chr18 45808558 45808588 -40868960 + AT_rich Low_complexity Low_complexity 1 30 0 190 273 39 70 chr18 45809416 45809544 -40868004 - L2 LINE L2 -48 3265 3142 707 242 227 7 chr18 45809569 45809846 -40867702 - MER58B DNA MER1_type 0 341 4 1772 146 38 14 chr18 45809947 45810234 -40867314 - AluJb SINE Alu -18 294 1 238 333 14 0 chr18 45810240 45810309 -40867239 - L2 LINE L2 -239 3074 3005 7595 161 30 43 chr18 45810497 45811097 -40866451 - L1 LINE L1 -922 5224 4618 1778 118 29 15 chr18 45811097 45811369 -40866179 + AluY SINE Alu 1 276 -35 7595 161 30 43 chr18 45811369 45812409 -40865139 - L1 LINE L1 -1528 4618 3605 311 281 18 102 chr18 45812869 45813036 -40864512 - MIR SINE MIR -21 241 89 1912 195 25 76 chr18 45813149 45813624 -40863924 + L1ME1 LINE L1 3763 4208 -1938 1758 181 7 0 chr18 45813624 45813934 -40863614 - AluSx SINE Alu 0 312 1 1912 195 25 76 chr18 45813934 45814012 -40863536 + L1ME1 LINE L1 4208 4288 -1858 1747 256 36 15 chr18 45814088 45814565 -40862983 + L1ME1 LINE L1 5675 6161 -5 293 367 112 6 chr18 45815308 45815477 -40862071 - MIR3 SINE MIR -2 206 20 191 327 121 61 chr18 45816457 45816622 -40860926 - MIR3 SINE MIR -15 193 19 296 361 0 16 chr18 45816840 45816962 -40860586 + MIR SINE MIR 30 149 -113 26 0 0 0 chr18 45817041 45817067 -40860481 + AT_rich Low_complexity Low_complexity 1 26 0 274 217 14 0 chr18 45817529 45817598 -40859950 + L1M4 LINE L1 2903 2972 -3174 198 188 43 58 chr18 45817734 45817803 -40859745 - L2 LINE L2 -1 3312 3245 388 304 77 42 chr18 45817877 45817971 -40859577 + L1M4 LINE L1 3083 3172 -2974 647 174 14 58 chr18 45817971 45818109 -40859439 + FLAM_C SINE Alu 1 132 -1 388 304 77 42 chr18 45818109 45818300 -40859248 + L1M4 LINE L1 3172 3378 -2768 368 250 45 36 chr18 45818915 45819027 -40858521 - MLT1H LTR MaLR -217 332 220 22 0 0 0 chr18 45819205 45819227 -40858321 + AT_rich Low_complexity Low_complexity 1 22 0 309 109 0 0 chr18 45819761 45819816 -40857732 + (T)n Simple_repeat Simple_repeat 1 55 0 2009 85 0 36 chr18 45820398 45820679 -40856869 - AluSp SINE Alu -6 307 37 1793 151 16 30 chr18 45822492 45822796 -40854752 + AluSx SINE Alu 1 300 -12 3848 198 41 1 chr18 45823714 45824340 -40853208 + L1MC2 LINE L1 5319 5985 -359 297 0 0 0 chr18 45824340 45824373 -40853175 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 3848 198 41 1 chr18 45824373 45824546 -40853002 + L1MC2 LINE L1 5985 6150 -194 38077 91 6 14 chr18 45824557 45830952 -40846596 + L1PA6 LINE L1 11 6160 0 4688 153 43 36 chr18 45830954 45831783 -40845765 - L1PA16 LINE L1 -9 6157 5319 6521 69 40 0 chr18 45831783 45832769 -40844779 - L1PA7 LINE L1 -13 6141 5142 4688 153 43 36 chr18 45832769 45832854 -40844694 - L1PA16 LINE L1 -847 5319 5236 576 234 117 0 chr18 45832854 45832999 -40844549 + L1ME1 LINE L1 4705 4866 -1280 2243 258 63 8 chr18 45833024 45833990 -40843558 + L1ME1 LINE L1 5019 6037 -129 310 315 89 7 chr18 45834273 45834425 -40843123 - MIR3 SINE MIR -34 174 10 626 351 155 40 chr18 45835573 45836455 -40841093 + L3 LINE CR1 297 1280 -297 330 150 0 67 chr18 45836750 45836810 -40840738 + MLT1L LTR MaLR 151 206 -409 2427 44 0 3 chr18 45836837 45837132 -40840416 + AluY SINE Alu 1 294 -17 861 148 137 0 chr18 45837132 45837314 -40840234 + L1MC3 LINE L1 7564 7770 -15 279 0 0 0 chr18 45838643 45838674 -40838874 + (TTTA)n Simple_repeat Simple_repeat 1 31 0 429 54 0 0 chr18 45838920 45838976 -40838572 + (CA)n Simple_repeat Simple_repeat 2 57 0 1066 264 58 34 chr18 45841248 45842183 -40835365 + L1M2 LINE L1 2732 3718 -3847 2414 63 0 0 chr18 45842183 45842483 -40835065 + AluY SINE Alu 1 300 -11 1066 264 58 34 chr18 45842483 45842598 -40834950 + L1M2 LINE L1 3718 3829 -3736 10173 220 56 23 chr18 45842809 45845469 -40832079 + L1M2 LINE L1 3838 6629 -1102 2977 171 25 74 chr18 45845469 45846196 -40831352 - LTR8 LTR ERV1 0 691 1 10173 220 56 23 chr18 45846196 45846785 -40830763 + L1M2 LINE L1 6629 7197 -534 338 0 0 23 chr18 45846923 45846966 -40830582 + (CAAAA)n Simple_repeat Simple_repeat 4 45 0 22 0 0 0 chr18 45847071 45847093 -40830455 + AT_rich Low_complexity Low_complexity 1 22 0 183 226 75 0 chr18 45847464 45847517 -40830031 + L2 LINE L2 2425 2481 -833 716 222 101 2 chr18 45848122 45848376 -40829172 + MER110A LTR ERV1 1 337 -131 607 208 146 0 chr18 45848388 45848518 -40829030 + FAM SINE Alu 18 166 -19 334 277 50 14 chr18 45848542 45848683 -40828865 + MER110A LTR ERV1 323 468 0 2240 105 17 0 chr18 45848900 45849196 -40828352 - AluSg SINE Alu -9 301 1 2013 152 100 12 chr18 45849331 45849752 -40827796 - LOR1b LTR ERV1 0 461 4 319 274 197 40 chr18 45850085 45850512 -40827036 - L1ME4a LINE L1 -102 6088 5595 546 286 101 62 chr18 45850677 45851368 -40826180 - L1ME4a LINE L1 -812 5403 4686 234 247 54 43 chr18 45851531 45851624 -40825924 - LTR67 LTR ERVL -7 550 457 663 308 83 16 chr18 45851876 45852263 -40825285 - L1ME3A LINE L1 -76 6094 5682 231 287 11 0 chr18 45852284 45852371 -40825177 - L1ME4a LINE L1 -4994 1402 1315 315 286 89 0 chr18 45852669 45852837 -40824711 - L1MEc LINE L1 -3383 2832 2650 449 266 144 63 chr18 45852842 45852947 -40824601 - L1MEc LINE L1 -3613 2602 2507 1854 149 16 43 chr18 45852947 45853269 -40824279 - AluSq SINE Alu 0 313 1 942 115 6 19 chr18 45853276 45853433 -40824115 - L1PA13 LINE L1 -2 6161 6007 449 266 144 63 chr18 45853433 45853702 -40823846 - L1MEc LINE L1 -3713 2502 2189 315 0 0 0 chr18 45853935 45853970 -40823578 + (TG)n Simple_repeat Simple_repeat 2 36 0 1867 240 176 24 chr18 45854582 45855816 -40821732 - L1MC4 LINE L1 0 8042 6445 331 274 88 27 chr18 45856071 45856470 -40821078 - L1MEc LINE L1 -4505 1750 1330 725 237 64 96 chr18 45856481 45856886 -40820662 - L1ME LINE L1 -517 5714 5323 479 267 83 43 chr18 45856921 45857341 -40820207 - L1ME LINE L1 -1481 4734 4298 189 0 0 0 chr18 45857381 45857402 -40820146 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 3376 203 72 10 chr18 45857417 45858186 -40819362 - L1PB4 LINE L1 -5 6151 5336 2524 222 20 20 chr18 45858187 45858414 -40819134 + L1P LINE L1 3111 3337 -2809 1976 151 0 31 chr18 45858414 45858732 -40818816 + AluSx SINE Alu 1 308 -4 2524 222 20 20 chr18 45858732 45859192 -40818356 + L1P LINE L1 3336 3798 -2348 434 329 93 29 chr18 45859228 45859510 -40818038 - L1ME LINE L1 -2065 4150 3850 21 0 0 0 chr18 45859599 45859620 -40817928 + AT_rich Low_complexity Low_complexity 1 21 0 1861 135 6 66 chr18 45859666 45859984 -40817564 - AluSx SINE Alu -13 299 1 319 342 89 30 chr18 45860475 45860712 -40816836 - L1ME LINE L1 -4578 1818 1568 21 0 0 0 chr18 45861179 45861200 -40816348 + AT_rich Low_complexity Low_complexity 1 21 0 4447 71 3 3 chr18 45861270 45861860 -40815688 - L1PA5 LINE L1 0 6154 5565 28046 41 43 2 chr18 45861860 45865407 -40812141 - L1P LINE L1 -2452 3694 1 259 298 73 24 chr18 45866971 45867095 -40810453 + MIR SINE MIR 123 252 -10 210 374 11 0 chr18 45867106 45867197 -40810351 + L2 LINE L2 3222 3313 0 546 165 0 0 chr18 45867591 45867682 -40809866 + MSTA LTR MaLR 338 428 0 4301 159 19 35 chr18 45867746 45868542 -40809006 - THE1-int LTR MaLR -66 1514 732 3898 199 38 3 chr18 45868837 45869594 -40807954 - MSTA-int LTR MaLR -867 784 1 1946 153 138 5 chr18 45869594 45869972 -40807576 - MSTA LTR MaLR 0 428 1 214 374 66 0 chr18 45870369 45870460 -40807088 + MIR SINE MIR 41 137 -71 1440 300 69 22 chr18 45870617 45871598 -40805950 + L1M1 LINE L1 2592 3618 -3947 2469 238 66 11 chr18 45871617 45872337 -40805211 + L1M1 LINE L1 3741 4511 -3054 1950 125 3 46 chr18 45872337 45872482 -40805066 + AluSg SINE Alu 1 128 -182 221 57 29 0 chr18 45872482 45872517 -40805031 + (CAAAA)n Simple_repeat Simple_repeat 5 40 0 1950 125 3 46 chr18 45872517 45872676 -40804872 + AluSg SINE Alu 128 292 -18 2469 238 66 11 chr18 45872676 45872753 -40804795 + L1M1 LINE L1 4511 4582 -2983 323 351 40 20 chr18 45872815 45873114 -40804434 - LTR16B LTR ERVL -17 447 143 230 322 70 49 chr18 45873537 45873680 -40803868 - MIR3 SINE MIR -32 176 31 2433 64 0 16 chr18 45875445 45875757 -40801791 + AluY SINE Alu 1 307 -4 244 278 157 37 chr18 45876588 45876696 -40800852 + MIR3 SINE MIR 77 197 -11 327 281 52 0 chr18 45883591 45883687 -40793861 + MIR SINE MIR 90 190 -72 565 306 62 25 chr18 45883913 45884155 -40793393 - MLT1F1 LTR MaLR -4 563 313 347 296 28 19 chr18 45885139 45885247 -40792301 + MER5B DNA MER1_type 66 174 -4 212 346 52 80 chr18 45885811 45886100 -40791448 - L2 LINE L2 -12 3260 2980 403 198 22 44 chr18 45886183 45886274 -40791274 - MER81 DNA DNA 0 114 26 1752 142 6 68 chr18 45886495 45886818 -40790730 - AluSx SINE Alu -9 303 1 2049 120 7 10 chr18 45938128 45938428 -40739120 - AluSx SINE Alu -13 299 1 25 0 0 0 chr18 45938534 45938559 -40738989 + AT_rich Low_complexity Low_complexity 1 25 0 24 53 0 0 chr18 45939221 45939259 -40738289 + AT_rich Low_complexity Low_complexity 1 38 0 1190 337 98 11 chr18 45940041 45940853 -40736695 + ERVL LTR ERVL 1929 2811 -2953 265 393 7 0 chr18 45941171 45941311 -40736237 + ERVL LTR ERVL 3196 3336 -2428 3639 245 52 7 chr18 45941336 45942505 -40735043 - Charlie1a DNA MER1_type -22 1433 212 2302 176 29 5 chr18 45942505 45942919 -40734629 + MSTB LTR MaLR 1 424 -2 374 216 64 32 chr18 45942920 45943038 -40734510 - Charlie1a DNA MER1_type -1239 216 95 1378 214 17 46 chr18 45943038 45943388 -40734160 - MLT1A1 LTR MaLR 0 365 26 231 196 22 0 chr18 45943396 45943442 -40734106 - Charlie1a DNA MER1_type -1353 102 56 311 322 87 45 chr18 45944014 45944393 -40733155 + ERVL LTR ERVL 3604 3998 -1656 808 276 62 49 chr18 45944584 45944741 -40732807 + ERVL LTR ERVL 4303 4456 -1308 2214 141 0 0 chr18 45944741 45945053 -40732495 + AluSx SINE Alu 1 312 0 808 276 62 49 chr18 45945053 45945265 -40732283 + ERVL LTR ERVL 4456 4677 -1087 455 322 105 4 chr18 45945339 45945597 -40731951 + ERVL LTR ERVL 4797 5080 -684 7251 184 63 15 chr18 45945685 45947258 -40730290 - MER52A LTR ERV1 0 1755 1 287 336 32 8 chr18 45947326 45947451 -40730097 - HERVL LTR ERVL -1945 3709 3582 275 270 15 7 chr18 45947834 45947971 -40729577 + (TA)n Simple_repeat Simple_repeat 2 139 0 457 102 10 51 chr18 45947971 45948069 -40729479 - MER52A LTR ERV1 -834 921 828 362 209 0 0 chr18 45948066 45948133 -40729415 - MER52A LTR ERV1 -285 1470 1404 * 2139 125 7 0 chr18 45948193 45948482 -40729066 + AluSq SINE Alu 1 291 -22 446 161 11 0 chr18 45948483 45948576 -40728972 + (TA)n Simple_repeat Simple_repeat 1 94 0 211 293 30 81 chr18 45948823 45948922 -40728626 - MER5A DNA MER1_type -38 151 58 319 313 37 30 chr18 45949943 45950077 -40727471 - MIR3 SINE MIR 0 208 74 455 291 81 64 chr18 45951384 45951498 -40726050 - MARNA DNA Mariner -51 535 424 2049 122 17 0 chr18 45951498 45951786 -40725762 + AluSg SINE Alu 1 293 -17 455 291 81 64 chr18 45951786 45952029 -40725519 - MARNA DNA Mariner -162 424 172 185 277 0 0 chr18 45953584 45953631 -40723917 - MIR SINE MIR -146 116 70 181 292 0 0 chr18 45953845 45953859 -40723689 - L2 LINE L2 -2 3311 3264 193 176 0 0 chr18 45953859 45953893 -40723655 - MIR SINE MIR -10 252 219 206 121 0 0 chr18 45954237 45954270 -40723278 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 551 71 30 20 chr18 45954445 45954544 -40723004 + (TTCC)n Simple_repeat Simple_repeat 1 100 0 1280 202 3 38 chr18 45954544 45954836 -40722712 - AluJo SINE Alu -1 311 30 23 54 0 0 chr18 45955467 45955504 -40722044 + AT_rich Low_complexity Low_complexity 1 37 0 333 0 0 0 chr18 45955642 45955679 -40721869 + (TG)n Simple_repeat Simple_repeat 2 38 0 296 349 13 7 chr18 45956192 45956341 -40721207 - L1ME LINE L1 -551 5611 5461 833 158 0 0 chr18 45957083 45957203 -40720345 + 5S rRNA rRNA 1 120 -1 758 227 0 0 chr18 45957400 45957541 -40720007 + FRAM SINE Alu 1 140 -36 23 68 0 0 chr18 45957544 45957588 -40719960 + AT_rich Low_complexity Low_complexity 1 44 0 370 336 0 0 chr18 45958352 45958456 -40719092 + MIR3 SINE MIR 92 195 -13 1140 146 58 11 chr18 45958707 45959038 -40718510 + Tigger1 DNA MER2_type 26 2418 0 296 286 140 52 chr18 45959567 45960410 -40717138 + L1M4 LINE L1 4487 5403 -743 2408 237 58 24 chr18 45960476 45960985 -40716563 + L1MC4a LINE L1 6163 6154 -205 255 31 0 0 chr18 45960985 45961017 -40716531 + (CA)n Simple_repeat Simple_repeat 2 33 0 2408 237 58 24 chr18 45961017 45961232 -40716316 + L1MC4a LINE L1 6153 6359 0 399 300 67 0 chr18 45961728 45961848 -40715700 + MER58A DNA MER1_type 1 128 0 269 173 0 19 chr18 45961848 45961893 -40715655 + MER58A DNA MER1_type 181 224 0 2617 204 35 35 chr18 45962056 45962678 -40714870 - MLT1E3 LTR MaLR 0 624 3 26 50 0 0 chr18 45963714 45963754 -40713794 + AT_rich Low_complexity Low_complexity 1 40 0 242 111 0 0 chr18 45963844 45963889 -40713659 - LTR66 LTR ERVL -171 439 395 488 152 95 48 chr18 45963916 45964021 -40713527 - Tigger7 DNA MER2_type -1 2486 2377 567 108 0 77 chr18 45964024 45964219 -40713329 + (TA)n Simple_repeat Simple_repeat 1 180 0 307 82 15 103 chr18 45964236 45964431 -40713117 + (TA)n Simple_repeat Simple_repeat 1 178 0 424 55 5 109 chr18 45964459 45964660 -40712888 + (TA)n Simple_repeat Simple_repeat 1 180 0 201 175 79 16 chr18 45964663 45964726 -40712822 + (TATAG)n Simple_repeat Simple_repeat 4 70 0 369 83 55 66 chr18 45964726 45964907 -40712641 + (CTATA)n Simple_repeat Simple_repeat 2 180 0 533 277 76 56 chr18 45965108 45965411 -40712137 - MLT1J LTR MaLR -202 309 1 6172 201 25 60 chr18 45966314 45967924 -40709624 + L1MCa LINE L1 34 1587 -4839 325 104 91 26 chr18 45967929 45968006 -40709542 - L1MCa LINE L1 -4422 2004 1923 5548 232 34 44 chr18 45968029 45970485 -40707063 + L1MCa LINE L1 2057 4486 -1940 1146 140 0 11 chr18 45970486 45970664 -40706884 + AluSg/x SINE Alu 137 312 0 579 255 59 31 chr18 45970664 45970954 -40706594 + L1MCa LINE L1 4462 4759 -1667 1079 264 18 18 chr18 45971059 45971389 -40706159 + L1MC1 LINE L1 3877 4206 -1940 1081 156 0 17 chr18 45971390 45971569 -40705979 + AluSg/x SINE Alu 135 310 0 4222 223 45 32 chr18 45971569 45973685 -40703863 + L1MC1 LINE L1 4184 6313 -20 736 281 25 10 chr18 45974099 45974295 -40703253 + MIR SINE MIR 37 235 -27 1574 253 17 67 chr18 45975167 45975704 -40701844 - MLT2B1 LTR ERVL -8 512 3 26 0 0 0 chr18 45975736 45975762 -40701786 + AT_rich Low_complexity Low_complexity 1 26 0 750 236 15 0 chr18 45976094 45976289 -40701259 + L1 LINE L1 4225 4422 -1724 263 202 48 12 chr18 45976296 45976380 -40701168 + (TATG)n Simple_repeat Simple_repeat 2 88 0 364 290 31 18 chr18 45976483 45976864 -40700684 + L1MEc LINE L1 2023 2395 -3820 1170 252 4 4 chr18 45976881 45977123 -40700425 + Tigger7 DNA MER2_type 1 242 -463 1471 280 115 55 chr18 45977453 45977666 -40699882 - L1ME LINE L1 -1519 4561 4362 1517 49 0 0 chr18 45977666 45977851 -40699697 - L1PA5 LINE L1 -6 6148 5964 1471 280 115 55 chr18 45977851 45978864 -40698684 - L1ME LINE L1 -1718 4362 3229 1529 89 47 0 chr18 45978864 45979099 -40698449 + L1PB1 LINE L1 5904 6149 -2 1471 280 115 55 chr18 45979099 45979337 -40698211 - L1ME LINE L1 -2851 3229 3007 * 2615 182 52 1 chr18 45979332 45979868 -40697680 - L1PA16 LINE L1 -4 7588 7007 10831 246 86 68 chr18 45979875 45980925 -40696623 - L1PA16 LINE L1 -1008 6576 5546 2312 90 7 0 chr18 45980925 45981224 -40696324 + AluSp SINE Alu 1 301 -12 10831 246 86 68 chr18 45981224 45981408 -40696140 - L1PA16 LINE L1 -2038 5546 5367 5389 52 34 0 chr18 45981408 45982106 -40695442 + LTR30 LTR ERV1 1 722 0 10831 246 86 68 chr18 45982106 45986176 -40691372 - L1PA16 LINE L1 -2217 5367 1370 2258 144 5 19 chr18 45986176 45986545 -40691003 + THE1B LTR MaLR 1 364 0 10831 246 86 68 chr18 45986545 45987119 -40690429 - L1PA16 LINE L1 -6214 1370 808 434 103 0 0 chr18 45987119 45987177 -40690371 - THE1B LTR MaLR -67 297 240 10831 246 86 68 chr18 45987177 45987581 -40689967 - L1PA16 LINE L1 -6776 808 8 526 244 159 7 chr18 45987583 45987854 -40689694 - L1ME LINE L1 -3051 3029 2718 7849 144 53 35 chr18 45987854 45989295 -40688253 + Tigger2 DNA MER2_type 1 1468 -1250 759 210 123 87 chr18 45989296 45989596 -40687952 - MER66A LTR ERV1 -141 337 27 3768 139 6 39 chr18 45989604 45990243 -40687305 - MER66A-int LTR ERV1 0 6676 6059 8100 181 36 21 chr18 45990400 45991954 -40685594 - MER66A-int LTR ERV1 -3878 2798 1221 651 258 20 0 chr18 45992053 45992204 -40685344 - MER66A-int LTR ERV1 -3573 3103 2950 1551 175 131 56 chr18 45992297 45992726 -40684822 - MER66A-int LTR ERV1 -5562 1114 654 3721 82 12 0 chr18 45992727 45993239 -40684309 - L1P LINE L1 -1500 4646 4129 1934 72 0 0 chr18 45993239 45993512 -40684036 + L1PA7 LINE L1 5890 6166 0 2254 215 67 70 chr18 45993512 45994167 -40683381 - MER66A-int LTR ERV1 -6023 653 1 1077 236 9 31 chr18 45994179 45994521 -40683027 - MER66A LTR ERV1 -39 447 27 5611 172 51 21 chr18 45994529 45995633 -40681915 + Tigger2 DNA MER2_type 1582 2718 0 903 185 35 91 chr18 45995669 45995923 -40681625 + MLT2D LTR ERVL 85 324 -90 239 130 0 22 chr18 45995996 45996042 -40681506 + (CATA)n Simple_repeat Simple_repeat 4 48 0 2056 144 39 28 chr18 45996045 45996405 -40681143 - THE1B LTR MaLR 0 364 1 280 150 0 67 chr18 45996406 45996466 -40681082 + MLT2D LTR ERVL 465 520 0 658 227 121 40 chr18 45996478 45996676 -40680872 - MER20 DNA MER1_type -4 215 2 583 294 7 47 chr18 45996705 45997001 -40680547 - L1ME LINE L1 -3391 2689 2406 312 297 47 0 chr18 45997044 45997172 -40680376 - L1MEc LINE L1 -4295 2101 1968 424 237 103 82 chr18 45997341 45997592 -40679956 - L1ME LINE L1 -3696 2384 2161 216 67 0 0 chr18 45997592 45997622 -40679926 + (TG)n Simple_repeat Simple_repeat 2 31 0 424 237 103 82 chr18 45997622 45997871 -40679677 - L1ME LINE L1 -3919 2161 1919 1415 294 75 55 chr18 45998304 45999462 -40678086 - L1ME LINE L1 -4295 1966 833 1936 140 0 3 chr18 45999462 45999748 -40677800 + AluSx SINE Alu 1 285 -27 248 0 31 0 chr18 45999748 45999780 -40677768 + (CA)n Simple_repeat Simple_repeat 2 34 0 1415 294 75 55 chr18 45999780 46000429 -40677119 - L1ME LINE L1 -5428 833 83 300 111 0 0 chr18 46000429 46000474 -40677074 + (TG)n Simple_repeat Simple_repeat 2 46 0 1415 294 75 55 chr18 46000474 46000507 -40677041 - L1ME LINE L1 -6178 83 52 210 238 0 0 chr18 46000768 46000810 -40676738 + CT-rich Low_complexity Low_complexity 3 44 0 3715 184 48 22 chr18 46001802 46002762 -40674786 + L1MB4 LINE L1 5096 6077 -103 197 65 32 0 chr18 46003373 46003404 -40674144 + (GAAA)n Simple_repeat Simple_repeat 4 35 0 225 253 12 48 chr18 46003462 46003545 -40674003 + MLT1K LTR MaLR 492 571 -17 581 254 8 0 chr18 46004828 46004950 -40672598 - FLAM_A SINE Alu -10 123 1 500 58 0 0 chr18 46005598 46005667 -40671881 + MER41B LTR ERV1 481 549 -86 186 43 0 0 chr18 46005667 46005690 -40671858 + (A)n Simple_repeat Simple_repeat 1 23 0 203 372 47 0 chr18 46006086 46006215 -40671333 - L2 LINE L2 0 3313 3179 332 343 153 37 chr18 46006320 46006838 -40670710 - L2 LINE L2 -222 3050 2463 209 205 0 0 chr18 46007095 46007134 -40670414 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1915 149 0 0 chr18 46008041 46008363 -40669185 + AluSx SINE Alu 1 322 0 398 78 0 0 chr18 46008466 46008517 -40669031 + Alu SINE Alu 230 280 -20 186 43 0 0 chr18 46008517 46008540 -40669008 + (TC)n Simple_repeat Simple_repeat 2 24 0 1166 291 109 33 chr18 46008678 46009276 -40668272 - MLT2F LTR ERVL -12 651 9 1316 210 15 74 chr18 46010141 46010532 -40667016 + MLT1A2 LTR MaLR 3 370 -4 637 276 73 0 chr18 46010535 46010727 -40666821 - MIR SINE MIR -3 259 54 1720 167 0 4 chr18 46010978 46011248 -40666300 + AluJb SINE Alu 7 275 -37 240 320 0 0 chr18 46011475 46011553 -40665995 + MLT1L LTR MaLR 2 79 -536 1622 175 10 19 chr18 46011754 46012062 -40665486 - AluJb SINE Alu -7 305 1 280 293 85 0 chr18 46013584 46013666 -40663882 - L2 LINE L2 -16 3256 3168 2350 77 0 0 chr18 46013760 46014057 -40663491 + AluY SINE Alu 1 297 -14 270 287 118 29 chr18 46014460 46014596 -40662952 - MIR SINE MIR -24 238 91 217 228 250 0 chr18 46015821 46015913 -40661635 + MIR SINE MIR 147 261 -1 273 318 11 0 chr18 46016330 46016418 -40661130 + MIR SINE MIR 65 153 -109 358 340 80 11 chr18 46019042 46019219 -40658329 + L1ME LINE L1 4945 5147 -999 2107 116 6 10 chr18 46019219 46019530 -40658018 + AluSq SINE Alu 1 310 -3 358 340 80 11 chr18 46019530 46019614 -40657934 + L1ME LINE L1 5147 5224 -922 29 0 0 0 chr18 46019771 46019800 -40657748 + AT_rich Low_complexity Low_complexity 1 29 0 216 209 0 0 chr18 46019899 46019942 -40657606 + (TA)n Simple_repeat Simple_repeat 2 44 0 21 36 0 0 chr18 46020163 46020191 -40657357 + AT_rich Low_complexity Low_complexity 1 28 0 271 289 63 57 chr18 46020207 46020366 -40657182 + L1ME LINE L1 5435 5594 -527 27 0 0 0 chr18 46020523 46020550 -40656998 + AT_rich Low_complexity Low_complexity 1 27 0 284 212 30 50 chr18 46020554 46020653 -40656895 - MER103 DNA DNA -3 163 67 233 302 0 0 chr18 46021814 46021877 -40655671 + GA-rich Low_complexity Low_complexity 4 66 0 3728 115 42 29 chr18 46021933 46022019 -40655529 + MER41B LTR ERV1 1 84 -551 1732 109 4 15 chr18 46022019 46022284 -40655264 - AluY SINE Alu -32 279 18 3728 115 42 29 chr18 46022284 46022824 -40654724 + MER41B LTR ERV1 84 635 0 371 329 20 20 chr18 46023026 46023175 -40654373 + MIR3 SINE MIR 40 188 -20 1504 264 42 65 chr18 46023556 46024128 -40653420 + L1MCb LINE L1 3 561 -5484 1912 227 19 26 chr18 46024286 46024753 -40652795 + L1MCb LINE L1 615 1078 -4967 366 218 56 35 chr18 46024759 46024901 -40652647 - MER5C DNA MER1_type 0 324 180 1152 246 23 14 chr18 46024905 46025254 -40652294 + L1MCb LINE L1 1066 1417 -5147 * 2321 247 106 24 chr18 46025242 46026982 -40650566 + L1MCb LINE L1 1821 3705 -2859 210 333 0 33 chr18 46027008 46027098 -40650450 - MIR SINE MIR -76 186 100 322 259 89 30 chr18 46027175 46027310 -40650238 - MLT1L LTR MaLR 0 615 473 365 123 4 0 chr18 46027373 46027439 -40650109 - MSTD LTR MaLR -8 388 339 2022 133 7 3 chr18 46027656 46027950 -40649598 - AluSx SINE Alu -17 295 1 1512 233 25 25 chr18 46028384 46028749 -40648799 + MLT1A1 LTR MaLR 1 365 0 209 279 25 13 chr18 46029584 46029663 -40647885 + (TA)n Simple_repeat Simple_repeat 2 81 0 334 304 57 25 chr18 46029666 46029824 -40647724 - MER117 DNA MER1_type -26 171 9 714 260 148 9 chr18 46029939 46030162 -40647386 - MIR SINE MIR -2 260 7 2072 121 0 0 chr18 46031118 46031408 -40646140 + AluSx SINE Alu 22 311 -1 3470 266 112 45 chr18 46031439 46031738 -40645810 + L1MEc LINE L1 44 321 -6075 1945 194 70 8 chr18 46031738 46032139 -40645409 - MSTB LTR MaLR 0 426 1 3470 266 112 45 chr18 46032139 46033983 -40643565 + L1MEc LINE L1 321 2331 -4065 904 219 1 3 chr18 46033995 46034243 -40643305 + AluJb SINE Alu 1 281 -31 317 240 49 123 chr18 46034294 46034498 -40643050 + L1ME2 LINE L1 5836 6024 -140 231 300 0 0 chr18 46034903 46035039 -40642509 + (TA)n Simple_repeat Simple_repeat 1 136 0 21 36 0 0 chr18 46037153 46037181 -40640367 + AT_rich Low_complexity Low_complexity 1 28 0 330 26 0 0 chr18 46037503 46037542 -40640006 + (TA)n Simple_repeat Simple_repeat 2 40 0 330 289 42 54 chr18 46038004 46038073 -40639475 + HAL1 LINE L1 1145 1213 -1294 2439 169 26 0 chr18 46038073 46038488 -40639060 - MSTB LTR MaLR 0 426 1 330 289 42 54 chr18 46038488 46038584 -40638964 + HAL1 LINE L1 1213 1308 -1199 26 0 0 0 chr18 46039157 46039183 -40638365 + AT_rich Low_complexity Low_complexity 1 26 0 559 246 23 8 chr18 46040101 46040231 -40637317 + MER45A DNA AcHobo 33 164 -14 182 365 73 21 chr18 46040634 46040730 -40636818 + L2 LINE L2 3153 3253 -19 297 0 0 0 chr18 46041011 46041044 -40636504 + (TG)n Simple_repeat Simple_repeat 1 33 0 720 246 6 6 chr18 46041684 46041855 -40635693 + MER5B DNA MER1_type 4 174 -4 2191 136 21 21 chr18 46042296 46042671 -40634877 + THE1C LTR MaLR 1 375 0 642 143 0 0 chr18 46043188 46043286 -40634262 + AluSp SINE Alu 185 282 -31 201 39 0 0 chr18 46043291 46043317 -40634231 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 275 292 158 29 chr18 46043837 46044008 -40633540 - MIR SINE MIR -7 255 63 23 54 0 0 chr18 46044161 46044198 -40633350 + AT_rich Low_complexity Low_complexity 1 37 0 473 200 5 168 chr18 46044325 46044545 -40633003 + MER110A LTR ERV1 70 253 -215 2203 88 3 3 chr18 46044706 46045000 -40632548 - AluSq SINE Alu -7 306 13 26 0 0 0 chr18 46045283 46045309 -40632239 + AT_rich Low_complexity Low_complexity 1 26 0 455 210 185 25 chr18 46045314 46045471 -40632077 - MER110A LTR ERV1 -3 465 284 368 312 0 0 chr18 46047260 46047369 -40630179 + L2 LINE L2 2892 3000 -313 20977 81 17 2 chr18 46047434 46051176 -40626372 - L1PA6 LINE L1 0 6154 2380 645 305 79 29 chr18 46051176 46051491 -40626057 + L2 LINE L2 2981 3311 -2 241 188 27 25 chr18 46051764 46051843 -40625705 + L1P5 LINE L1 5341 5432 -692 313 266 43 77 chr18 46051946 46052121 -40625427 + L1ME LINE L1 5632 5801 -320 286 349 103 30 chr18 46053534 46053766 -40623782 - MLT1K LTR MaLR -5 583 335 1552 102 4 21 chr18 46055096 46055332 -40622216 + L1PA8 LINE L1 5935 6166 -6 208 313 73 0 chr18 46055561 46055657 -40621891 - MIR SINE MIR -2 260 158 2272 93 0 16 chr18 46056157 46056470 -40621078 - AluSx SINE Alu -2 310 3 726 208 33 0 chr18 46057134 46057317 -40620231 + MER53 DNA DNA 1 189 0 340 344 8 0 chr18 46059056 46059178 -40618370 + MIR3 SINE MIR 81 203 -5 2189 123 0 0 chr18 46060685 46060994 -40616554 + AluSx SINE Alu 1 309 -3 337 270 79 32 chr18 46061350 46061476 -40616072 + L2 LINE L2 3182 3313 0 424 242 108 25 chr18 46061635 46061792 -40615756 - MIR SINE MIR -36 226 57 472 304 94 0 chr18 46062249 46062387 -40615161 - LTR33 LTR ERVL -366 155 5 25 51 0 0 chr18 46062488 46062527 -40615021 + AT_rich Low_complexity Low_complexity 1 39 0 1444 322 52 58 chr18 46064685 46065377 -40612171 - MER115 DNA AcHobo 0 693 6 2252 57 30 13 chr18 46066187 46066486 -40611062 + AluY SINE Alu 1 304 -7 892 239 125 8 chr18 46066928 46067183 -40610365 + MER110A LTR ERV1 1 286 -182 6057 161 71 17 chr18 46067183 46068350 -40609198 - Tigger3b DNA MER2_type 0 1231 2 21 0 0 0 chr18 46069333 46069354 -40608194 + AT_rich Low_complexity Low_complexity 1 21 0 324 330 40 40 chr18 46070252 46070479 -40607069 - L1MEd LINE L1 -4928 1191 965 1105 178 5 5 chr18 46070573 46070787 -40606761 + L1PA13 LINE L1 5950 6163 0 798 184 0 13 chr18 46070789 46070941 -40606607 - Tigger2 DNA MER2_type -80 2638 2489 28 0 0 0 chr18 46071517 46071545 -40606003 + AT_rich Low_complexity Low_complexity 1 28 0 25 51 0 0 chr18 46071748 46071787 -40605761 + AT_rich Low_complexity Low_complexity 1 39 0 498 296 28 34 chr18 46072084 46072263 -40605285 - MIR SINE MIR -76 186 9 22 0 0 0 chr18 46073706 46073728 -40603820 + AT_rich Low_complexity Low_complexity 1 22 0 512 286 24 52 chr18 46074106 46074316 -40603232 - MIR SINE MIR -39 223 20 1625 273 29 34 chr18 46074940 46075523 -40602025 - L1ME1 LINE L1 -5 6161 5582 417 336 71 7 chr18 46075598 46075980 -40601568 - L1ME1 LINE L1 -2183 3963 3556 931 235 31 127 chr18 46076167 46076642 -40600906 + MER110 LTR ERV1 80 605 -3 29 0 0 0 chr18 46077016 46077045 -40600503 + AT_rich Low_complexity Low_complexity 1 29 0 209 169 70 0 chr18 46077258 46077329 -40600219 + (TA)n Simple_repeat Simple_repeat 1 76 0 385 274 175 30 chr18 46077455 46077787 -40599761 - L1ME1 LINE L1 -3627 2519 2140 30 27 0 0 chr18 46077996 46078033 -40599515 + AT_rich Low_complexity Low_complexity 1 37 0 354 367 36 10 chr18 46078370 46078566 -40598982 - L1M4 LINE L1 -2289 3857 3657 22 0 0 0 chr18 46078725 46078747 -40598801 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18 46078810 46078832 -40598716 + AT_rich Low_complexity Low_complexity 1 22 0 704 328 52 10 chr18 46078938 46079322 -40598226 + MLT1L LTR MaLR 137 536 -79 379 282 74 11 chr18 46079848 46080132 -40597416 - L1M4 LINE L1 -3654 2492 2191 669 256 141 0 chr18 46080865 46081056 -40596492 - MER58A DNA MER1_type -6 218 1 1035 279 126 25 chr18 46081474 46081951 -40595597 - MLT1H LTR MaLR -24 525 1 1877 197 50 14 chr18 46082806 46083222 -40594326 - MSTB1 LTR MaLR -1 431 1 747 336 25 51 chr18 46084644 46085192 -40592356 + L1PA16 LINE L1 871 1404 -6170 12488 228 26 39 chr18 46085638 46086534 -40591014 + L1PA16 LINE L1 2183 3090 -4514 2620 46 0 0 chr18 46086534 46086841 -40590707 + AluY SINE Alu 1 307 -4 12488 228 26 39 chr18 46086841 46087967 -40589581 + L1PA16 LINE L1 3090 4230 -3374 2069 124 0 10 chr18 46087967 46088266 -40589282 + AluSx SINE Alu 1 296 -16 12488 228 26 39 chr18 46088266 46091738 -40585810 + L1PA16 LINE L1 4230 7594 -10 225 0 0 0 chr18 46091738 46091763 -40585785 + (T)n Simple_repeat Simple_repeat 1 25 0 369 279 7 0 chr18 46091986 46092122 -40585426 - MER31-int LTR ERV1 -3490 1446 1310 23 54 0 0 chr18 46092144 46092181 -40585367 + AT_rich Low_complexity Low_complexity 1 37 0 31 0 0 0 chr18 46092220 46092251 -40585297 + AT_rich Low_complexity Low_complexity 1 31 0 3995 285 46 11 chr18 46093047 46094541 -40583007 + ERVL-C1 LTR ERVL 335 1968 -3796 4193 205 28 13 chr18 46094541 46095469 -40582079 + ERVL-C1 LTR ERVL 4198 5167 -597 1173 244 16 0 chr18 46095469 46095789 -40581759 - L1PA15 LINE L1 -1616 4530 4206 4876 121 45 40 chr18 46095789 46096635 -40580913 + L1PA15 LINE L1 4534 5394 -771 2324 75 0 34 chr18 46096635 46096957 -40580591 + AluY SINE Alu 1 311 0 4876 121 45 40 chr18 46096957 46097731 -40579817 + L1PA15 LINE L1 5394 6162 -3 1537 207 65 42 chr18 46097733 46098207 -40579341 + ERVL-C1 LTR ERVL 5134 5593 -61 804 251 89 52 chr18 46098237 46098620 -40578928 + MLT2C1 LTR ERVL 1 397 0 252 0 0 0 chr18 46098702 46098730 -40578818 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1544 241 44 44 chr18 46099255 46099758 -40577790 + MLT1D LTR MaLR 3 505 0 252 86 0 0 chr18 46100219 46100254 -40577294 + (TG)n Simple_repeat Simple_repeat 1 35 0 627 248 85 0 chr18 46102718 46102871 -40574677 - MIR SINE MIR -18 244 79 1776 181 3 16 chr18 46102968 46103283 -40574265 + AluJo SINE Alu 1 311 -1 1425 135 150 86 chr18 46103285 46103501 -40574047 - MER7A DNA MER2_type -2692 346 103 5775 104 15 1 chr18 46103501 46104690 -40572858 + L1PA13 LINE L1 4927 6144 -19 1425 135 150 86 chr18 46104690 46104800 -40572748 - MER7A DNA MER2_type -2935 103 1 2520 176 43 24 chr18 46104907 46105372 -40572176 + MLT2B1 LTR ERVL 1 478 -42 533 53 26 0 chr18 46105372 46105448 -40572100 + (TCTA)n Simple_repeat Simple_repeat 1 78 0 2520 176 43 24 chr18 46105448 46105492 -40572056 + MLT2B1 LTR ERVL 478 520 0 1775 129 42 7 chr18 46106693 46106979 -40570569 - AluSx SINE Alu -16 296 1 36 0 0 0 chr18 46107601 46107637 -40569911 + AT_rich Low_complexity Low_complexity 1 36 0 7573 150 47 1 chr18 46108200 46110349 -40567199 - L1PA11 LINE L1 -2 6172 3957 360 0 0 0 chr18 46110349 46110389 -40567159 + (TG)n Simple_repeat Simple_repeat 2 41 0 2132 88 0 34 chr18 46110389 46110683 -40566865 - AluY SINE Alu -27 284 1 3912 196 32 2 chr18 46110685 46111529 -40566019 - L1P LINE L1 -744 5402 4534 1207 246 15 0 chr18 46111520 46111849 -40565699 + L1P LINE L1 4197 4530 -1616 * 4208 203 28 13 chr18 46111849 46112777 -40564771 - ERVL LTR ERVL -597 5167 4198 3951 280 49 13 chr18 46112777 46114271 -40563277 - ERVL LTR ERVL -3796 1968 335 31 0 0 0 chr18 46115067 46115098 -40562450 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr18 46115137 46115174 -40562374 + AT_rich Low_complexity Low_complexity 1 37 0 472 235 7 0 chr18 46115196 46115332 -40562216 + MER31-int LTR ERV1 1310 1446 -3490 272 233 80 33 chr18 46115522 46115672 -40561876 + MER31-int LTR ERV1 1759 1915 -3021 247 283 50 44 chr18 46115928 46116087 -40561461 - Charlie1 DNA MER1_type -29 2732 2573 321 129 0 75 chr18 46116639 46116732 -40560816 + LTR37A LTR ERV1 339 424 -2 21 36 0 0 chr18 46116740 46116768 -40560780 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr18 46117241 46117269 -40560279 + AT_rich Low_complexity Low_complexity 1 28 0 2279 112 3 0 chr18 46117282 46117585 -40559963 + AluSg SINE Alu 1 304 -6 2275 195 42 16 chr18 46118812 46119362 -40558186 + ERVL-C1 LTR ERVL 4576 5167 -597 1156 244 16 0 chr18 46119362 46119682 -40557866 - L1PA15 LINE L1 -1616 4530 4206 4602 128 45 48 chr18 46119682 46120528 -40557020 + L1PA15 LINE L1 4534 5379 -786 2397 72 0 28 chr18 46120528 46120846 -40556702 + AluY SINE Alu 1 309 -2 4602 128 45 48 chr18 46120846 46121628 -40555920 + L1PA15 LINE L1 5379 6162 -3 1519 207 65 42 chr18 46121630 46122104 -40555444 + ERVL-C1 LTR ERVL 5134 5593 -61 801 251 89 52 chr18 46122134 46122517 -40555031 + MLT2C1 LTR ERVL 1 397 0 252 0 0 0 chr18 46122599 46122627 -40554921 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1545 241 44 44 chr18 46123152 46123655 -40553893 + MLT1D LTR MaLR 3 505 0 252 86 0 0 chr18 46124116 46124151 -40553397 + (TG)n Simple_repeat Simple_repeat 1 35 0 627 248 85 0 chr18 46126615 46126768 -40550780 - MIR SINE MIR -18 244 79 1776 181 3 16 chr18 46126865 46127180 -40550368 + AluJo SINE Alu 1 311 -1 1425 135 150 86 chr18 46127182 46127398 -40550150 - MER7A DNA MER2_type -2692 346 103 5775 104 15 1 chr18 46127398 46128587 -40548961 + L1PA13 LINE L1 4927 6144 -19 1425 135 150 86 chr18 46128587 46128697 -40548851 - MER7A DNA MER2_type -2935 103 1 2520 176 43 24 chr18 46128804 46129269 -40548279 + MLT2B1 LTR ERVL 1 478 -42 497 56 28 0 chr18 46129269 46129341 -40548207 + (TCTA)n Simple_repeat Simple_repeat 1 74 0 2520 176 43 24 chr18 46129341 46129385 -40548163 + MLT2B1 LTR ERVL 478 520 0 1767 130 42 7 chr18 46130587 46130872 -40546676 - AluSx SINE Alu -17 295 1 36 0 0 0 chr18 46131494 46131530 -40546018 + AT_rich Low_complexity Low_complexity 1 36 0 11116 151 33 8 chr18 46132093 46134242 -40543306 - L1PA11 LINE L1 -2 6172 4078 360 0 0 0 chr18 46134242 46134282 -40543266 + (TG)n Simple_repeat Simple_repeat 2 41 0 2243 87 3 7 chr18 46134282 46134569 -40542979 - AluSp SINE Alu -27 286 1 11116 151 33 8 chr18 46134569 46135211 -40542337 - L1PA11 LINE L1 -2095 4079 3326 180 77 0 0 chr18 46136458 46136484 -40541064 + (T)n Simple_repeat Simple_repeat 1 26 0 263 255 28 14 chr18 46136994 46137135 -40540413 + (CAATT)n Simple_repeat Simple_repeat 5 147 0 202 270 54 40 chr18 46137438 46137512 -40540036 - L2 LINE L2 -19 3294 3220 21 0 0 0 chr18 46137927 46137948 -40539600 + AT_rich Low_complexity Low_complexity 1 21 0 295 286 79 36 chr18 46137976 46138116 -40539432 - MIR SINE MIR -52 210 65 203 200 0 0 chr18 46139161 46139201 -40538347 - L2 LINE L2 -9 3304 3265 251 254 0 60 chr18 46139619 46139686 -40537862 - L2 LINE L2 0 3272 3210 3929 143 16 2 chr18 46142434 46143058 -40534490 - MER41B LTR ERV1 0 635 3 779 354 58 15 chr18 46143239 46143634 -40533914 + LTR33 LTR ERVL 105 516 -5 1749 238 57 30 chr18 46143950 46144442 -40533106 - MLT1D LTR MaLR 0 505 1 1042 200 20 29 chr18 46144443 46144688 -40532860 + MLT2D LTR ERVL 1 243 -171 222 171 0 0 chr18 46144769 46144810 -40532738 + (TG)n Simple_repeat Simple_repeat 2 42 0 265 213 0 0 chr18 46144811 46144858 -40532690 + MLT2D LTR ERVL 368 414 0 1838 263 23 65 chr18 46145412 46146062 -40531486 + MLT1E2 LTR MaLR 1 623 -3 281 340 66 0 chr18 46147634 46147740 -40529808 + L2 LINE L2 3144 3256 -16 374 306 61 7 chr18 46148656 46148803 -40528745 - MIR SINE MIR -61 201 47 1036 118 190 10 chr18 46148859 46149054 -40528494 + MER30 DNA MER1_type 1 230 0 1325 252 143 13 chr18 46149536 46149984 -40527564 + MLT1H LTR MaLR 3 508 -41 209 416 11 0 chr18 46150082 46150206 -40527342 + MIR SINE MIR 14 140 -68 227 385 103 0 chr18 46150813 46150930 -40526618 + MER5A DNA MER1_type 60 188 -1 268 239 197 17 chr18 46151697 46151814 -40525734 - MIR SINE MIR -6 256 119 272 262 32 100 chr18 46152030 46152309 -40525239 - MER112 DNA MER1_type 0 260 1 386 260 87 52 chr18 46153110 46153283 -40524265 - MIR SINE MIR -56 206 28 245 308 84 35 chr18 46154837 46154980 -40522568 + MIR SINE MIR 13 162 -46 321 289 70 26 chr18 46155068 46155182 -40522366 - MIR SINE MIR -109 153 35 209 267 0 17 chr18 46155438 46155498 -40522050 + CT-rich Low_complexity Low_complexity 4 62 0 247 323 191 21 chr18 46156112 46156301 -40521247 + MIR SINE MIR 23 243 -19 1043 140 29 54 chr18 46156538 46156782 -40520766 + L1MA9 LINE L1 6056 6166 0 1578 193 25 14 chr18 46156782 46157067 -40520481 + AluJb SINE Alu 1 288 -24 239 330 93 17 chr18 46157615 46157733 -40519815 - MIR SINE MIR -108 154 28 2145 106 3 0 chr18 46157734 46158016 -40519532 + AluSg SINE Alu 1 283 -27 222 62 0 0 chr18 46158016 46158048 -40519500 + (CATA)n Simple_repeat Simple_repeat 2 33 0 34401 109 16 15 chr18 46158804 46164943 -40512605 - L1PA6 LINE L1 -2 6152 12 192 262 0 0 chr18 46166045 46166087 -40511461 - L2 LINE L2 0 3313 3272 442 288 147 0 chr18 46167491 46167661 -40509887 + MIR SINE MIR 38 232 -30 237 182 13 26 chr18 46167810 46167887 -40509661 + (TA)n Simple_repeat Simple_repeat 1 76 0 21 36 0 0 chr18 46167972 46168000 -40509548 + AT_rich Low_complexity Low_complexity 1 28 0 236 319 0 0 chr18 46168717 46168786 -40508762 + MIR3 SINE MIR 133 201 -7 412 307 39 20 chr18 46169622 46169775 -40507773 - MIR3 SINE MIR -15 193 38 382 310 124 58 chr18 46170019 46170293 -40507255 + L1MEc LINE L1 232 523 -5873 857 267 29 0 chr18 46170398 46170671 -40506877 - L1MCc LINE L1 -4888 1535 1255 1144 325 130 34 chr18 46170683 46171666 -40505882 - L1MCc LINE L1 -5288 1135 58 29 47 0 0 chr18 46171712 46171755 -40505793 + AT_rich Low_complexity Low_complexity 1 43 0 1653 153 41 3 chr18 46171826 46172120 -40505428 - MER7A DNA MER2_type -1 345 43 29 0 0 0 chr18 46172181 46172210 -40505338 + AT_rich Low_complexity Low_complexity 1 29 0 524 266 94 38 chr18 46172298 46172617 -40504931 + L1M4 LINE L1 4522 4858 -1288 2178 214 25 2 chr18 46172659 46173130 -40504418 - L1MD1 LINE L1 -20 6222 5741 2109 147 0 0 chr18 46173303 46173615 -40503933 - AluSx SINE Alu 0 312 1 1027 296 52 45 chr18 46173755 46174157 -40503391 + L1MA6 LINE L1 3 407 -6382 * 10328 191 35 34 chr18 46174154 46175658 -40501890 + L1MA6 LINE L1 3399 4899 -2043 1746 133 11 14 chr18 46175658 46175936 -40501612 + AluSx SINE Alu 11 287 -25 10328 191 35 34 chr18 46175936 46176977 -40500571 + L1MA6 LINE L1 4899 5952 -990 1738 142 38 3 chr18 46176977 46177266 -40500282 + AluJb SINE Alu 9 307 -5 10328 191 35 34 chr18 46177266 46178259 -40499289 + L1MA6 LINE L1 5952 6942 0 317 340 148 10 chr18 46178336 46178545 -40499003 + L2 LINE L2 2917 3154 -159 355 158 0 0 chr18 46180259 46180316 -40497232 - MER5A DNA MER1_type -132 57 1 180 0 0 0 chr18 46180518 46180538 -40497010 + (A)n Simple_repeat Simple_repeat 1 20 0 1254 117 62 43 chr18 46181531 46181788 -40495760 + L1MA1 LINE L1 6041 6302 0 18921 28 0 3 chr18 46183901 46186931 -40490617 + L1PA3 LINE L1 3131 6155 0 810 285 126 20 chr18 46187784 46188346 -40489202 - L2 LINE L2 -5 3308 2623 180 77 0 0 chr18 46192356 46192382 -40485166 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 2130 187 70 58 chr18 46192890 46193472 -40484076 - L1MD3 LINE L1 -1 7994 7406 240 279 38 0 chr18 46193474 46193553 -40483995 - MLT1F1 LTR MaLR -442 125 44 532 268 7 0 chr18 46193560 46193698 -40483850 - L1MD3 LINE L1 -696 7299 7161 251 275 0 0 chr18 46193715 46193806 -40483742 - L1M4 LINE L1 -2641 3505 3415 * 1535 291 17 2 chr18 46193802 46194270 -40483278 + L1ME3A LINE L1 5686 6160 -10 192 384 14 0 chr18 46194851 46194924 -40482624 - L3 LINE CR1 -1474 103 30 184 119 24 24 chr18 46195518 46195560 -40481988 + (TA)n Simple_repeat Simple_repeat 1 42 0 203 255 20 0 chr18 46197076 46197127 -40480421 - MIR SINE MIR -1 261 210 1137 281 144 48 chr18 46197171 46198057 -40479491 - L2 LINE L2 -14 3299 2328 409 320 20 40 chr18 46198072 46198272 -40479276 - MIR SINE MIR -65 197 2 218 337 45 0 chr18 46199871 46199960 -40477588 - MIR3 SINE MIR -19 189 97 214 184 0 195 chr18 46200814 46200901 -40476647 - L2 LINE L2 0 3313 3244 202 360 0 0 chr18 46201861 46201936 -40475612 - MIR SINE MIR -19 243 169 234 0 0 0 chr18 46202028 46202054 -40475494 + (T)n Simple_repeat Simple_repeat 1 26 0 457 167 59 0 chr18 46202803 46202905 -40474643 + L1MC3 LINE L1 7670 7777 -8 715 312 37 23 chr18 46204385 46204660 -40472888 - LTR16A LTR ERVL -112 338 62 383 331 62 91 chr18 46205466 46205962 -40471586 + L1ME3A LINE L1 254 735 -5384 25 31 0 0 chr18 46206038 46206070 -40471478 + AT_rich Low_complexity Low_complexity 1 32 0 315 315 193 5 chr18 46206080 46206721 -40470827 + L1ME3A LINE L1 2093 2854 -3275 355 100 29 0 chr18 46206813 46206883 -40470665 + (TA)n Simple_repeat Simple_repeat 2 73 0 2750 167 84 8 chr18 46207208 46207794 -40469754 + L1MB1 LINE L1 5534 6163 -5 433 305 71 17 chr18 46207890 46208244 -40469304 + L1ME3A LINE L1 3458 3830 -2299 992 139 0 0 chr18 46208253 46208404 -40469144 + AluSp/q SINE Alu 158 308 -5 39148 76 10 3 chr18 46208404 46214501 -40463047 + L1PA5 LINE L1 3 6138 -16 402 286 85 32 chr18 46214501 46214690 -40462858 + L1ME3A LINE L1 3820 4018 -2111 1632 213 11 11 chr18 46214690 46215065 -40462483 - L1PB4 LINE L1 0 6859 6485 2253 90 3 3 chr18 46215073 46215362 -40462186 - AluSp SINE Alu -23 290 2 320 278 22 0 chr18 46215362 46215452 -40462096 - L1MC4 LINE L1 -1335 6707 6616 11645 230 26 7 chr18 46215453 46219093 -40458455 - L1PB4 LINE L1 -369 6490 2787 464 269 172 37 chr18 46219098 46219656 -40457892 + L1ME3A LINE L1 4015 4659 -1470 7458 35 0 9 chr18 46219656 46221174 -40456374 - L1PA4 LINE L1 -4 6151 4640 464 269 172 37 chr18 46221174 46221207 -40456341 + L1ME3A LINE L1 4659 4686 -1443 827 86 0 0 chr18 46221207 46221323 -40456225 - L1P3 LINE L1 -720 5434 5319 701 251 40 13 chr18 46221333 46221560 -40455988 - MER20B DNA MER1_type -113 670 438 1515 263 53 76 chr18 46221576 46222440 -40455108 + L1ME3A LINE L1 5307 6150 -3 604 266 93 36 chr18 46222477 46222878 -40454670 + L1M4 LINE L1 2271 2701 -3445 1954 159 7 0 chr18 46222878 46223179 -40454369 + AluSx SINE Alu 1 303 -9 604 266 93 36 chr18 46223179 46223216 -40454332 + L1M4 LINE L1 2701 2734 -3412 1158 148 5 78 chr18 46223384 46223601 -40453947 + AluJb SINE Alu 101 301 -11 245 304 107 54 chr18 46223624 46223736 -40453812 + MIR SINE MIR 3 120 -142 * 391 333 62 0 chr18 46223709 46223838 -40453710 - L2 LINE L2 -2 3270 3134 2188 49 7 21 chr18 46223839 46224161 -40453387 + AluY SINE Alu 1 318 0 559 275 92 11 chr18 46224163 46224436 -40453112 - L1M4 LINE L1 -848 5298 5004 618 153 10 0 chr18 46224542 46224640 -40452908 - AluS SINE Alu -212 101 3 244 275 25 12 chr18 46224646 46224726 -40452822 - L1MC5 LINE L1 -568 7393 7313 1034 103 135 0 chr18 46224742 46224898 -40452650 - AluJb SINE Alu -1 311 135 2166 97 4 0 chr18 46224899 46225178 -40452370 - AluSg SINE Alu -21 289 10 1744 251 151 41 chr18 46225229 46225815 -40451733 + L1M4 LINE L1 2841 3361 -2785 2486 77 0 0 chr18 46225815 46226125 -40451423 - AluY SINE Alu -1 310 1 1744 251 151 41 chr18 46226125 46226189 -40451359 + L1M4 LINE L1 3361 3417 -2729 1753 121 104 7 chr18 46226189 46226469 -40451079 - AluSx SINE Alu -5 307 1 1744 251 151 41 chr18 46226469 46227316 -40450232 + L1M4 LINE L1 3417 4505 -1641 23 0 0 0 chr18 46227434 46227457 -40450091 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr18 46227832 46227853 -40449695 + AT_rich Low_complexity Low_complexity 1 21 0 1714 108 25 108 chr18 46228377 46228693 -40448855 - AluSx SINE Alu -22 290 1 869 311 47 14 chr18 46229189 46229485 -40448063 - L3 LINE CR1 -9 1568 1263 2307 107 0 0 chr18 46230211 46230520 -40447028 - AluSc SINE Alu 0 309 1 180 0 0 0 chr18 46230569 46230589 -40446959 + (T)n Simple_repeat Simple_repeat 1 20 0 24 32 0 0 chr18 46230604 46230635 -40446913 + AT_rich Low_complexity Low_complexity 1 31 0 815 284 79 54 chr18 46233137 46233560 -40443988 - MLT1J LTR MaLR 0 511 39 2466 188 112 9 chr18 46237263 46237807 -40439741 - MER7C DNA MER2_type 0 602 3 451 49 62 86 chr18 46238782 46238863 -40438685 - MADE1 DNA Mariner 0 80 2 279 304 70 70 chr18 46239136 46239251 -40438297 - L2 LINE L2 -2 3270 3156 7545 24 4 6 chr18 46239307 46240696 -40436852 + L1PA4 LINE L1 4768 6155 0 9139 188 24 9 chr18 46240813 46241513 -40436035 - L1PA15 LINE L1 -14 6151 5462 1658 240 67 67 chr18 46241513 46242067 -40435481 + MLT2B3 LTR ERVL 1 554 0 9139 188 24 9 chr18 46242067 46244221 -40433327 - L1PA15 LINE L1 -703 5462 3256 4630 201 70 12 chr18 46244216 46245901 -40431647 - L1MA3 LINE L1 -259 7465 5668 * 2049 194 76 10 chr18 46245904 46246301 -40431247 - MSTA LTR MaLR -5 423 1 8643 175 42 14 chr18 46246301 46249676 -40427872 - L1MA3 LINE L1 -1894 5671 2200 5803 149 22 0 chr18 46249675 46250021 -40427527 - L1PB1 LINE L1 -7 7563 7226 * 396 0 0 0 chr18 46250021 46250065 -40427483 + (TG)n Simple_repeat Simple_repeat 2 45 0 5803 149 22 0 chr18 46250065 46250962 -40426586 - L1PB1 LINE L1 -344 7226 6292 210 105 0 0 chr18 46250962 46251000 -40426548 + (T)n Simple_repeat Simple_repeat 1 38 0 1457 211 3 7 chr18 46251031 46251329 -40426219 + L1 LINE L1 3761 4057 -2089 8414 186 107 10 chr18 46251338 46252973 -40424575 - L1PB1 LINE L1 -5753 1812 19 346 159 0 0 chr18 46252974 46253037 -40424511 + Tigger3(Golem) DNA MER2_type 2788 2850 -179 1194 208 0 5 chr18 46253086 46253293 -40424255 + Tigger3(Golem) DNA MER2_type 2823 3028 -1 244 294 46 51 chr18 46253361 46253501 -40424047 - MIR SINE MIR -62 146 21 443 239 112 88 chr18 46253805 46254224 -40423324 + L1MC5 LINE L1 6768 7196 -765 546 243 21 0 chr18 46254224 46254364 -40423184 + FLAM_C SINE Alu 1 143 0 499 238 68 99 chr18 46254524 46255008 -40422540 + L1MC5 LINE L1 7261 7729 -232 5884 165 21 9 chr18 46255239 46256923 -40420625 - L1MA3 LINE L1 0 6305 4600 1059 260 15 23 chr18 46256934 46257289 -40420259 - L1M4c LINE L1 -4438 1944 1545 1284 91 20 10 chr18 46257289 46257486 -40420062 - L1PA10 LINE L1 0 6168 5970 6173 208 53 21 chr18 46257486 46257738 -40419810 - L1MA3 LINE L1 -1548 4598 4356 2008 122 10 7 chr18 46257738 46258032 -40419516 + AluSx SINE Alu 1 295 -17 6173 208 53 21 chr18 46258032 46259424 -40418124 - L1MA3 LINE L1 -1790 4356 2901 6485 79 10 0 chr18 46259424 46260675 -40416873 - L1PA7 LINE L1 0 6154 4892 9652 42 0 0 chr18 46260675 46262683 -40414865 + L1PA3 LINE L1 4186 6198 0 24450 130 54 71 chr18 46262683 46267269 -40410279 - L1PA7 LINE L1 -1246 4900 405 280 0 50 0 chr18 46267269 46267309 -40410239 + (CAAAA)n Simple_repeat Simple_repeat 2 43 0 24450 130 54 71 chr18 46267309 46267696 -40409852 - L1PA7 LINE L1 -5741 405 13 2722 238 26 7 chr18 46267706 46268205 -40409343 - L1MA3 LINE L1 -3236 2910 2393 204 40 0 0 chr18 46268205 46268230 -40409318 + (TTA)n Simple_repeat Simple_repeat 3 27 0 2722 238 26 7 chr18 46268230 46268418 -40409130 - L1MA3 LINE L1 -3753 2393 2210 2677 180 37 7 chr18 46268476 46269015 -40408533 - L1PA16 LINE L1 -9 6157 5603 * 6313 76 19 0 chr18 46269012 46270361 -40407187 - L1PA7 LINE L1 -4 6150 4802 308 158 0 18 chr18 46270371 46270428 -40407120 + L1MC4 LINE L1 6648 6703 -1339 309 172 49 16 chr18 46270428 46270550 -40406998 + (TAAA)n Simple_repeat Simple_repeat 4 129 0 384 124 46 20 chr18 46270556 46270709 -40406839 + (TATAA)n Simple_repeat Simple_repeat 2 158 0 468 162 0 10 chr18 46270884 46270983 -40406565 + (TA)n Simple_repeat Simple_repeat 1 98 0 23874 130 36 89 chr18 46270984 46276029 -40401519 - L1PA16 LINE L1 -1355 4791 13 6219 193 49 126 chr18 46276047 46276977 -40400571 - L1P4 LINE L1 -555 7048 6048 1516 120 0 5 chr18 46276977 46277220 -40400328 + AluSg/x SINE Alu 78 319 0 6219 193 49 126 chr18 46277220 46277694 -40399854 - L1P4 LINE L1 -1555 6048 5539 2013 70 8 4 chr18 46277694 46277950 -40399598 - AluY SINE Alu -11 300 44 6219 193 49 126 chr18 46277950 46278398 -40399150 - L1P4 LINE L1 -2064 5539 5058 1238 56 19 0 chr18 46278398 46278558 -40398990 - L1PA8 LINE L1 -4 6168 6006 6219 193 49 126 chr18 46278558 46282013 -40395535 - L1P4 LINE L1 -2545 5058 2327 366 143 0 32 chr18 46282005 46282068 -40395480 - L1P4 LINE L1 -6081 1500 1440 * 1787 252 123 28 chr18 46282062 46282662 -40394886 - L1P4 LINE L1 -6750 831 175 235 242 15 0 chr18 46282714 46282780 -40394768 + L1M4 LINE L1 4628 4694 -1452 574 254 42 25 chr18 46282788 46283021 -40394527 + L1M1 LINE L1 5288 5520 -782 234 261 34 11 chr18 46283096 46283184 -40394364 + L1MEc LINE L1 793 882 -5514 26661 133 36 60 chr18 46283204 46286650 -40390898 + L1PA8 LINE L1 14 3211 -2961 2438 55 0 3 chr18 46286650 46286943 -40390605 + AluY SINE Alu 1 292 -19 26661 133 36 60 chr18 46286943 46289836 -40387712 + L1PA8 LINE L1 3211 6172 0 1834 162 124 23 chr18 46290397 46290785 -40386763 - MSTA LTR MaLR -1 427 1 1514 123 29 0 chr18 46290809 46291052 -40386496 - MSTA-int LTR MaLR -1380 271 22 1733 170 149 13 chr18 46291052 46291428 -40386120 - MSTA LTR MaLR 0 428 2 213 217 43 0 chr18 46291511 46291580 -40385968 + T-rich Low_complexity Low_complexity 2 73 0 190 365 135 0 chr18 46292848 46292974 -40384574 + L2 LINE L2 3165 3307 -6 2204 93 4 0 chr18 46293296 46293618 -40383930 + AluSg SINE Alu 1 323 0 200 278 0 78 chr18 46293676 46293713 -40383835 + MIR SINE MIR 162 200 -62 1839 113 4 8 chr18 46293713 46293978 -40383570 + AluSg SINE Alu 44 307 -3 200 278 0 78 chr18 46293978 46294030 -40383518 + MIR SINE MIR 200 244 -18 698 188 0 36 chr18 46296554 46296692 -40380856 - FLAM_A SINE Alu 0 133 1 491 255 20 0 chr18 46297059 46297212 -40380336 + MER103 DNA DNA 9 164 -2 406 333 48 14 chr18 46298871 46299018 -40378530 + L2 LINE L2 3091 3242 -30 243 0 0 0 chr18 46299348 46299375 -40378173 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 819 299 60 27 chr18 46299740 46300105 -40377443 - LTR16A LTR ERVL 0 450 74 279 335 43 23 chr18 46300383 46300539 -40377009 - MIR SINE MIR -68 140 38 330 276 43 26 chr18 46300869 46300985 -40376563 + MIR3 SINE MIR 73 190 -18 23 0 0 0 chr18 46301355 46301378 -40376170 + AT_rich Low_complexity Low_complexity 1 23 0 471 282 136 15 chr18 46303042 46303275 -40374273 + MIR SINE MIR 3 260 -2 374 319 25 0 chr18 46305066 46305185 -40372363 + MIR3 SINE MIR 79 200 -8 30 27 0 0 chr18 46306305 46306342 -40371206 + AT_rich Low_complexity Low_complexity 1 37 0 1470 139 29 0 chr18 46306815 46307060 -40370488 - L1MA2 LINE L1 0 6304 6053 216 0 0 0 chr18 46307177 46307201 -40370347 + (ATG)n Simple_repeat Simple_repeat 2 25 0 28 29 0 0 chr18 46308028 46308063 -40369485 + AT_rich Low_complexity Low_complexity 1 35 0 2012 133 7 0 chr18 46308799 46309093 -40368455 - AluSp SINE Alu -17 296 1 1164 312 103 32 chr18 46310691 46311591 -40365957 - L2 LINE L2 -10 3303 2335 563 333 64 14 chr18 46311609 46311906 -40365642 - MLT1I LTR MaLR -32 377 66 267 103 0 0 chr18 46311930 46311969 -40365579 + (ATG)n Simple_repeat Simple_repeat 1 39 0 1270 267 149 31 chr18 46311998 46312415 -40365133 - L2 LINE L2 -986 2328 1807 2106 163 65 0 chr18 46312415 46312801 -40364747 - LTR57 LTR ERVL 0 411 1 1270 267 149 31 chr18 46312801 46313028 -40364520 - L2 LINE L2 -1507 1807 1608 5237 270 73 34 chr18 46313028 46313810 -40363738 + L1M4b LINE L1 2 752 -6207 2150 122 7 3 chr18 46313810 46314113 -40363435 + AluSg SINE Alu 1 304 -6 5237 270 73 34 chr18 46314113 46314584 -40362964 + L1M4b LINE L1 752 1203 -5756 180 0 0 0 chr18 46314584 46314604 -40362944 + (CAA)n Simple_repeat Simple_repeat 2 21 0 5237 270 73 34 chr18 46314604 46315612 -40361936 + L1M4b LINE L1 1203 2363 -4596 345 47 0 0 chr18 46315612 46315655 -40361893 + (CA)n Simple_repeat Simple_repeat 2 44 0 5237 270 73 34 chr18 46315655 46315704 -40361844 + L1M4b LINE L1 2363 2409 -4550 2209 65 4 7 chr18 46315846 46316125 -40361423 - AluY SINE Alu -33 278 1 2930 267 73 31 chr18 46316215 46317798 -40359750 + L1M4b LINE L1 2604 4231 -2726 1548 199 40 50 chr18 46317800 46318176 -40359372 - MLT1A2 LTR MaLR -2 372 1 948 291 115 49 chr18 46318227 46318697 -40358851 - MLT2B1 LTR ERVL 0 520 20 473 212 0 0 chr18 46368729 46368814 -40308734 + FLAM_A SINE Alu 40 124 -18 338 222 0 56 chr18 46368821 46368911 -40308637 + MIR SINE MIR 137 221 -41 738 178 0 0 chr18 46368915 46369033 -40308515 + FLAM_A SINE Alu 1 118 -15 407 324 37 15 chr18 46369910 46370046 -40307502 - MIR3 SINE MIR -56 152 14 216 0 0 0 chr18 46370389 46370413 -40307135 + (TA)n Simple_repeat Simple_repeat 2 25 0 300 336 40 48 chr18 46370763 46370888 -40306660 - L2 LINE L2 -16 3256 3133 436 265 64 39 chr18 46372895 46373099 -40304449 - L1M4 LINE L1 -1438 4708 4500 2349 100 0 0 chr18 46373228 46373537 -40304011 - AluSg SINE Alu -1 309 1 380 253 130 0 chr18 46373864 46374026 -40303522 + L1M4 LINE L1 3064 3246 -2900 383 239 243 38 chr18 46374235 46374498 -40303050 - L1MEd LINE L1 -4880 1239 923 549 255 64 0 chr18 46375852 46375993 -40301555 - MIR SINE MIR -44 218 69 2019 124 6 51 chr18 46376267 46376582 -40300966 - AluSx SINE Alu -11 301 1 26 30 0 0 chr18 46377037 46377070 -40300478 + AT_rich Low_complexity Low_complexity 1 33 0 1077 209 60 95 chr18 46378037 46378510 -40299038 + MER66A LTR ERV1 97 475 -3 610 326 50 0 chr18 46378777 46379016 -40298532 - MIR SINE MIR 0 262 12 222 204 23 0 chr18 46379024 46379068 -40298480 + (TGGA)n Simple_repeat Simple_repeat 1 45 0 241 265 58 138 chr18 46379278 46379359 -40298189 + MER5A DNA MER1_type 7 93 -96 2208 90 7 3 chr18 46379359 46379647 -40297901 + AluSc SINE Alu 1 289 -20 241 265 58 138 chr18 46379647 46379754 -40297794 + MER5A DNA MER1_type 93 180 -9 273 316 43 29 chr18 46380368 46380507 -40297041 + MIR SINE MIR 90 230 -32 486 276 81 6 chr18 46381936 46382110 -40295438 + MLT1C LTR MaLR 207 393 -74 272 83 0 0 chr18 46382177 46382213 -40295335 + MER96B DNA MER1_type? 211 246 -171 33 25 0 0 chr18 46382532 46382572 -40294976 + AT_rich Low_complexity Low_complexity 1 40 0 1415 150 58 84 chr18 46385219 46385598 -40291950 + THE1C LTR MaLR 1 369 -6 9437 135 22 32 chr18 46385603 46387196 -40290352 + THE1C-int LTR MaLR 4 1580 0 1646 153 49 75 chr18 46387196 46387581 -40289967 + THE1C LTR MaLR 1 375 0 213 121 0 0 chr18 46388399 46388432 -40289116 + (TG)n Simple_repeat Simple_repeat 2 34 0 2243 139 25 56 chr18 46388446 46388893 -40288655 + Tigger2a DNA MER2_type 1 433 -1 319 41 41 0 chr18 46389554 46389603 -40287945 + (TG)n Simple_repeat Simple_repeat 2 52 0 11386 210 51 25 chr18 46390242 46392216 -40285332 + L1M1 LINE L1 2571 4492 -3073 1952 157 0 0 chr18 46392216 46392502 -40285046 - AluSx SINE Alu -21 291 6 11386 210 51 25 chr18 46392502 46394351 -40283197 + L1M1 LINE L1 4492 6501 -1064 480 179 60 0 chr18 46394351 46394468 -40283080 + L1MA4 LINE L1 6176 6299 -1 234 236 14 14 chr18 46394477 46394549 -40282999 + (TA)n Simple_repeat Simple_repeat 2 73 0 241 272 58 19 chr18 46394586 46394792 -40282756 + L1MEc LINE L1 1255 1468 -4928 237 286 33 0 chr18 46394862 46394953 -40282595 + L1MEc LINE L1 1565 1658 -4738 21 36 0 0 chr18 46395018 46395046 -40282502 + AT_rich Low_complexity Low_complexity 1 28 0 295 270 40 7 chr18 46395245 46395397 -40282151 - L1M4 LINE L1 -1490 4656 4500 486 143 0 31 chr18 46395522 46395620 -40281928 - AluSg/x SINE Alu 0 312 218 328 135 27 27 chr18 46395793 46395867 -40281681 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 363 219 0 0 chr18 46395889 46395962 -40281586 + Tigger5 DNA MER2_type 2251 2323 0 27 62 0 0 chr18 46396823 46396871 -40280677 + AT_rich Low_complexity Low_complexity 1 48 0 234 0 0 0 chr18 46396944 46396970 -40280578 + (TTG)n Simple_repeat Simple_repeat 2 27 0 25 31 0 0 chr18 46396992 46397024 -40280524 + AT_rich Low_complexity Low_complexity 1 32 0 1537 189 63 65 chr18 46397192 46397589 -40279959 + MSTD LTR MaLR 1 396 0 552 349 62 24 chr18 46397598 46397968 -40279580 + L1M4 LINE L1 4669 5052 -1094 32 43 0 0 chr18 46397973 46398019 -40279529 + AT_rich Low_complexity Low_complexity 1 46 0 211 340 80 10 chr18 46398743 46398883 -40278665 - MIR3 SINE MIR -41 167 19 1826 252 23 8 chr18 46398883 46399364 -40278184 + MER119 DNA MER1_type 5 492 -91 2173 101 3 36 chr18 46399785 46400091 -40277457 + AluSx SINE Alu 1 296 -16 2389 91 0 0 chr18 46400377 46400674 -40276874 + AluSc SINE Alu 1 297 -12 2685 130 13 24 chr18 46401001 46401456 -40276092 - MER41E LTR ERV1 -46 466 17 382 352 26 13 chr18 46402040 46402270 -40275278 + Charlie8 DNA MER1_type 2 234 -2183 196 286 16 111 chr18 46402335 46402461 -40275087 - MIR SINE MIR -57 151 38 236 297 0 0 chr18 46402728 46402792 -40274756 + MIR SINE MIR 50 113 -95 186 278 28 83 chr18 46403561 46403669 -40273879 + L2 LINE L2 2994 3095 -177 225 257 71 0 chr18 46403931 46404001 -40273547 - MIR3 SINE MIR -45 163 89 364 287 14 35 chr18 46404226 46404369 -40273179 + MIR SINE MIR 121 260 -2 234 0 0 0 chr18 46404401 46404427 -40273121 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 230 0 33 0 chr18 46404962 46404992 -40272556 + (TTTG)n Simple_repeat Simple_repeat 1 31 0 736 182 0 0 chr18 46404997 46405107 -40272441 - FLAM_C SINE Alu -33 110 1 235 255 20 10 chr18 46405127 46405225 -40272323 + Charlie7 DNA MER1_type 2495 2593 -19 358 302 118 38 chr18 46406717 46406929 -40270619 + MIR SINE MIR 31 259 -3 228 349 132 9 chr18 46408396 46408608 -40268940 + L2 LINE L2 2168 2405 -909 234 0 0 0 chr18 46409073 46409099 -40268449 + (CA)n Simple_repeat Simple_repeat 2 27 0 700 305 57 14 chr18 46409134 46409485 -40268063 + Charlie7 DNA MER1_type 119 484 -2128 362 343 28 7 chr18 46410587 46410730 -40266818 + MIR SINE MIR 1 146 -116 419 240 48 0 chr18 46410856 46410981 -40266567 + L1PB4 LINE L1 5164 5294 -852 2704 164 1 22 chr18 46411104 46411694 -40265854 + L1PB4 LINE L1 5482 6038 -118 334 255 53 72 chr18 46411694 46411907 -40265641 + L1ME3A LINE L1 1102 1350 -4862 * 357 313 0 0 chr18 46411905 46412017 -40265531 + L1ME3A LINE L1 4719 4830 -1299 383 302 28 4 chr18 46412197 46412348 -40265200 + L1ME3A LINE L1 5475 5600 -553 454 316 73 12 chr18 46412422 46412764 -40264784 + L1ME3A LINE L1 5571 5933 -220 286 300 9 18 chr18 46413422 46413532 -40264016 - MIR SINE MIR -69 139 31 21110 43 1 1 chr18 46414475 46417852 -40259696 + L1PA5 LINE L1 2769 6146 -8 355 311 81 19 chr18 46417884 46418045 -40259503 + MIR SINE MIR 92 262 0 199 346 51 0 chr18 46420698 46420776 -40256772 + L2 LINE L2 2291 2372 -942 690 231 39 34 chr18 46420794 46421028 -40256520 + L1ME2 LINE L1 5912 6146 -18 914 323 122 41 chr18 46421058 46421931 -40255617 + L2 LINE L2 2365 3313 0 760 263 136 62 chr18 46422022 46422509 -40255039 + MLT1H1 LTR MaLR 30 552 -3 354 227 13 0 chr18 46424003 46424078 -40253470 + MER21B LTR ERV1 12 87 -776 870 264 157 39 chr18 46424109 46424446 -40253102 + MER21B LTR ERV1 26 402 -461 253 273 20 10 chr18 46425147 46425285 -40252263 + A-rich Low_complexity Low_complexity 1 139 0 416 224 19 51 chr18 46425442 46425598 -40251950 - Charlie1 DNA MER1_type 0 2761 2611 657 293 42 14 chr18 46425950 46426162 -40251386 + MIR SINE MIR 4 221 -41 254 281 16 0 chr18 46427879 46427943 -40249605 - MIR3 SINE MIR -34 174 110 543 259 161 0 chr18 46428229 46428403 -40249145 + MIR SINE MIR 8 209 -53 380 300 55 30 chr18 46428890 46429090 -40248458 - L2 LINE L2 -3 3310 3106 255 194 28 0 chr18 46429663 46429735 -40247813 + (TA)n Simple_repeat Simple_repeat 2 75 0 220 224 0 90 chr18 46429881 46429948 -40247600 - MIR SINE MIR -106 102 42 205 122 24 24 chr18 46430493 46430534 -40247014 + CT-rich Low_complexity Low_complexity 6 46 0 221 402 11 0 chr18 46431892 46431979 -40245569 + MIR SINE MIR 2 89 -173 * 236 350 49 35 chr18 46431967 46432110 -40245438 + MIR3 SINE MIR 10 154 -54 28 29 0 0 chr18 46432214 46432249 -40245299 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr18 46432800 46432822 -40244726 + AT_rich Low_complexity Low_complexity 1 22 0 363 229 90 0 chr18 46433587 46433709 -40243839 + MER58 DNA MER1_type 2238 2370 -50 21 0 0 0 chr18 46434108 46434129 -40243419 + AT_rich Low_complexity Low_complexity 1 21 0 1976 120 60 11 chr18 46436193 46436477 -40241071 + AluSx SINE Alu 1 298 -14 279 337 76 0 chr18 46437892 46437984 -40239564 + MIR3 SINE MIR 97 195 -13 200 290 77 77 chr18 46438386 46438555 -40238993 + L2 LINE L2 3131 3299 -14 183 287 69 23 chr18 46439235 46439322 -40238226 - MIR3 SINE MIR -10 198 108 756 291 59 4 chr18 46440563 46440800 -40236748 - L1MC4 LINE L1 -1040 7002 6753 745 177 177 0 chr18 46440800 46440947 -40236601 - MER20 DNA MER1_type -42 177 5 689 293 101 75 chr18 46440952 46441384 -40236164 - L1MC4 LINE L1 -1881 5927 5479 2203 120 27 33 chr18 46441384 46441750 -40235798 + THE1B LTR MaLR 1 364 0 689 293 101 75 chr18 46441750 46441823 -40235725 - L1MC4 LINE L1 -2329 5479 5409 547 326 66 37 chr18 46442062 46442157 -40235391 - L1MC4 LINE L1 -1014 5132 5041 2221 120 25 35 chr18 46442157 46442525 -40235023 + THE1B LTR MaLR 1 364 0 547 326 66 37 chr18 46442525 46442911 -40234637 - L1MC4 LINE L1 -1105 5041 4637 303 298 50 21 chr18 46442945 46443086 -40234462 - L1MC4 LINE L1 -1624 4522 4378 2174 109 0 0 chr18 46443525 46443830 -40233718 + AluSq SINE Alu 1 305 0 705 234 34 23 chr18 46443856 46444169 -40233379 + L1ME LINE L1 5153 5466 -700 405 272 26 0 chr18 46444174 46444288 -40233260 - MLT1I LTR MaLR -292 117 1 198 317 35 55 chr18 46444588 46444733 -40232815 + L2 LINE L2 3169 3310 -3 1953 146 0 10 chr18 46444808 46445102 -40232446 - AluSx SINE Alu -21 291 1 26 0 0 0 chr18 46445236 46445262 -40232286 + AT_rich Low_complexity Low_complexity 1 26 0 356 261 11 0 chr18 46445322 46445410 -40232138 - MIR3 SINE MIR 0 208 120 257 304 36 45 chr18 46445815 46445927 -40231621 - MER5B DNA MER1_type -67 111 1 2770 20 0 0 chr18 46447791 46448097 -40229451 - AluYa5 SINE Alu -5 306 1 285 325 42 25 chr18 46448929 46449049 -40228499 - L3 LINE CR1 -464 1113 992 418 295 84 12 chr18 46450450 46450630 -40226918 + MIR3 SINE MIR 4 195 -13 190 319 43 21 chr18 46450993 46451087 -40226461 - MIR SINE MIR -15 247 152 843 332 39 20 chr18 46452705 46453216 -40224332 + L1ME LINE L1 5254 5770 -351 2243 105 3 0 chr18 46453505 46453801 -40223747 - AluSx SINE Alu -15 297 1 349 362 158 35 chr18 46453801 46454198 -40223350 - L3 LINE CR1 -7 1570 1121 207 0 0 0 chr18 46454264 46454287 -40223261 + (A)n Simple_repeat Simple_repeat 1 23 0 198 0 0 0 chr18 46454568 46454590 -40222958 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 24 0 0 0 chr18 46456011 46456035 -40221513 + AT_rich Low_complexity Low_complexity 1 24 0 186 319 151 0 chr18 46457587 46457706 -40219842 - MIR SINE MIR -50 212 76 300 27 0 0 chr18 46459674 46459711 -40217837 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 287 232 7 80 chr18 46460688 46460839 -40216709 - L1M4 LINE L1 -1084 5062 4923 * 613 192 30 78 chr18 46460837 46461004 -40216544 + L1PB3 LINE L1 5973 6131 -23 208 179 26 0 chr18 46461068 46461146 -40216402 + (TA)n Simple_repeat Simple_repeat 1 80 0 868 255 53 16 chr18 46461147 46461527 -40216021 - L1M4 LINE L1 -1345 4801 4408 262 257 0 35 chr18 46461559 46461672 -40215876 - L1MC4 LINE L1 -124 7918 7810 251 227 15 0 chr18 46461765 46461831 -40215717 - L1MC4 LINE L1 -794 7248 7182 1510 208 10 13 chr18 46461987 46462295 -40215253 + AluJo SINE Alu 3 309 -3 237 205 0 0 chr18 46462296 46462335 -40215213 + polypurine Low_complexity Low_complexity 1 39 0 462 154 17 17 chr18 46462339 46462456 -40215092 + GA-rich Low_complexity Low_complexity 4 120 0 422 294 57 57 chr18 46462617 46462828 -40214720 - MIR SINE MIR -5 257 47 465 277 0 7 chr18 46465745 46465882 -40211666 + LTR67 LTR ERVL 418 553 -4 22 0 0 0 chr18 46466181 46466203 -40211345 + AT_rich Low_complexity Low_complexity 1 22 0 498 321 68 34 chr18 46466774 46467011 -40210537 + MIR SINE MIR 12 256 -6 256 230 8 87 chr18 46468048 46468174 -40209374 - MIR SINE MIR -47 215 100 247 276 69 0 chr18 46468292 46468350 -40209198 + L2 LINE L2 3171 3232 -40 260 294 38 0 chr18 46470486 46470582 -40206966 + MIR SINE MIR 69 132 -76 3724 51 0 11 chr18 46472220 46472687 -40204861 + L1PA5 LINE L1 5693 6154 0 21 0 0 0 chr18 46473224 46473245 -40204303 + AT_rich Low_complexity Low_complexity 1 21 0 235 291 23 0 chr18 46473431 46473517 -40204031 - L2 LINE L2 -191 3081 2994 21 0 0 0 chr18 46473768 46473789 -40203759 + AT_rich Low_complexity Low_complexity 1 21 0 489 306 0 0 chr18 46474762 46474886 -40202662 + L2 LINE L2 2635 2758 -556 327 323 97 18 chr18 46474912 46475191 -40202357 - MER102b DNA MER1_type 0 341 41 1256 164 10 0 chr18 46475593 46475794 -40201754 - AluJb SINE Alu -109 203 1 280 174 87 87 chr18 46475826 46475918 -40201630 + MLT1J2 LTR MaLR 340 431 -19 366 340 209 13 chr18 46477924 46478239 -40199309 - L2 LINE L2 -1 3271 2895 381 278 82 109 chr18 46478260 46478562 -40198986 - L2 LINE L2 -397 2917 2625 2129 123 0 36 chr18 46478562 46478871 -40198677 + AluSg SINE Alu 1 298 -12 381 278 82 109 chr18 46478871 46478935 -40198613 - L2 LINE L2 -689 2625 2561 562 118 0 21 chr18 46479686 46479810 -40197738 - AluSg/x SINE Alu 0 309 216 1863 103 0 15 chr18 46479911 46480184 -40197364 + AluY SINE Alu 41 309 -2 254 277 12 12 chr18 46480407 46480490 -40197058 + LTR67 LTR ERVL 439 521 -36 2175 179 53 3 chr18 46482459 46482906 -40194642 + MLT1C LTR MaLR 1 396 0 227 252 24 102 chr18 46483354 46483481 -40194067 - MIR SINE MIR -67 195 79 302 317 92 0 chr18 46484566 46484686 -40192862 - L2 LINE L2 -1 3271 3141 1951 156 10 0 chr18 46485237 46485525 -40192023 + AluSx SINE Alu 1 291 -21 267 189 0 0 chr18 46485528 46485581 -40191967 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 357 43 0 0 chr18 46485583 46485630 -40191918 + (GA)n Simple_repeat Simple_repeat 2 48 0 1242 135 38 45 chr18 46487658 46487925 -40189623 + L1MB1 LINE L1 5827 6091 -77 539 268 0 0 chr18 46488209 46488321 -40189227 + MER81 DNA DNA 1 112 -2 248 313 88 0 chr18 46490378 46490458 -40187090 + L2 LINE L2 3150 3236 -36 277 356 52 7 chr18 46490676 46490811 -40186737 - MIR3 SINE MIR -15 193 53 550 305 76 40 chr18 46491598 46491978 -40185570 + MLT1J1 LTR MaLR 32 425 -21 25 51 0 0 chr18 46492041 46492080 -40185468 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr18 46492187 46492208 -40185340 + AT_rich Low_complexity Low_complexity 1 21 0 466 377 22 4 chr18 46493016 46493247 -40184301 - MIR SINE MIR -27 235 1 23 0 0 0 chr18 46493253 46493276 -40184272 + AT_rich Low_complexity Low_complexity 1 23 0 346 103 41 10 chr18 46493510 46493607 -40183941 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 38 68 0 0 chr18 46493607 46493680 -40183868 + AT_rich Low_complexity Low_complexity 1 73 0 536 82 66 44 chr18 46493684 46494346 -40183202 + (TTATA)n Simple_repeat Simple_repeat 1 676 0 * 618 24 82 29 chr18 46494318 46494488 -40183060 + (TA)n Simple_repeat Simple_repeat 2 180 0 262 108 54 40 chr18 46494489 46494563 -40182985 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 1033 330 71 22 chr18 46494709 46495404 -40182144 - L2 LINE L2 -15 3298 2560 504 100 0 12 chr18 46495594 46495674 -40181874 - MADE1 DNA Mariner 0 80 2 2494 160 21 0 chr18 46495783 46496202 -40181346 + MSTA LTR MaLR 1 428 0 27 62 0 0 chr18 46496312 46496360 -40181188 + AT_rich Low_complexity Low_complexity 1 48 0 196 299 65 37 chr18 46497004 46497111 -40180437 - L2 LINE L2 -809 2505 2396 213 271 163 66 chr18 46497891 46498057 -40179491 - MIR SINE MIR -61 201 20 186 391 36 9 chr18 46498603 46498713 -40178835 + L2 LINE L2 2954 3066 -206 266 313 24 0 chr18 46498934 46499017 -40178531 - MARNA DNA Mariner -31 555 471 411 307 13 27 chr18 46499851 46500001 -40177547 + MIR SINE MIR 79 226 -36 1333 75 32 11 chr18 46501000 46501186 -40176362 - AluSc SINE Alu -119 190 1 290 248 17 120 chr18 46501214 46501331 -40176217 + MIR3 SINE MIR 11 115 -93 192 270 95 0 chr18 46502009 46502072 -40175476 - L2 LINE L2 -685 2629 2561 240 385 62 8 chr18 46502520 46502650 -40174898 + MIR SINE MIR 53 189 -73 276 274 11 21 chr18 46502819 46502914 -40174634 - MLT1H LTR MaLR -9 558 465 467 303 22 39 chr18 46503105 46503336 -40174212 - MLT1H LTR MaLR -263 286 60 2178 122 0 3 chr18 46503447 46503751 -40173797 + AluSx SINE Alu 1 303 -9 556 265 57 126 chr18 46505866 46506096 -40171452 - MLT1E LTR MaLR -123 531 258 740 69 0 0 chr18 46506110 46506212 -40171336 + L1PA8 LINE L1 6071 6172 0 265 319 89 41 chr18 46506432 46506601 -40170947 - MIR3 SINE MIR -11 197 21 276 124 58 0 chr18 46506609 46506673 -40170875 + MIR SINE MIR 116 189 -19 424 314 157 10 chr18 46507111 46507315 -40170233 - MIR SINE MIR -6 256 23 223 380 33 0 chr18 46509770 46509862 -40167686 + MIR SINE MIR 49 143 -65 392 204 9 71 chr18 46510214 46510327 -40167221 - L1M4 LINE L1 -1918 4464 4359 2190 230 83 25 chr18 46510451 46511185 -40166363 - L1MC4 LINE L1 -515 7527 6751 350 305 181 14 chr18 46511278 46511560 -40165988 - L1MEc LINE L1 -4190 2373 2045 489 278 6 3 chr18 46511593 46511783 -40165765 - L1MEc LINE L1 -4529 1907 1671 437 230 18 0 chr18 46511928 46512041 -40165507 + MLT1C LTR MaLR 13 127 -263 5009 142 46 11 chr18 46512041 46513252 -40164296 + L1PA13 LINE L1 4896 6145 -18 987 183 66 98 chr18 46513304 46513621 -40163927 + MLT1C LTR MaLR 161 467 0 371 281 58 21 chr18 46513694 46514040 -40163508 - L1MEc LINE L1 -4984 1400 1046 28 29 0 0 chr18 46514084 46514119 -40163429 + AT_rich Low_complexity Low_complexity 1 35 0 306 299 53 70 chr18 46514614 46514801 -40162747 - L1MEc LINE L1 -6005 558 375 214 250 0 19 chr18 46515202 46515254 -40162294 + GA-rich Low_complexity Low_complexity 3 53 0 455 316 104 47 chr18 46515257 46515574 -40161974 - L2 LINE L2 -64 3249 2915 264 317 72 33 chr18 46515616 46515796 -40161752 - LTR50 LTR ERVL -608 187 1 621 313 75 42 chr18 46516135 46516640 -40160908 - ERVL LTR ERVL -398 5366 4845 2098 135 52 0 chr18 46517011 46517359 -40160189 + MER47A DNA MER2_type 1 366 0 231 380 99 0 chr18 46517442 46517563 -40159985 + MIR3 SINE MIR 13 145 -63 543 333 73 5 chr18 46517586 46517790 -40159758 - MIR SINE MIR 0 262 45 197 344 24 48 chr18 46518219 46518344 -40159204 + MIR3 SINE MIR 4 125 -83 221 281 16 16 chr18 46518349 46518413 -40159135 - MIR3 SINE MIR -41 167 104 241 263 17 76 chr18 46518499 46518617 -40158931 + MIR SINE MIR 112 222 -40 285 306 12 12 chr18 46519190 46519275 -40158273 - MIR SINE MIR -21 241 157 306 326 54 63 chr18 46519426 46519647 -40157901 + L3 LINE CR1 1297 1515 -62 237 273 66 41 chr18 46519859 46519980 -40157568 + L2 LINE L2 2941 3064 -208 220 330 68 11 chr18 46520173 46520261 -40157287 + L2 LINE L2 3153 3245 -27 228 358 0 0 chr18 46520275 46520342 -40157206 + polypurine Low_complexity Low_complexity 4 70 0 319 296 155 7 chr18 46521093 46521235 -40156313 + MIR3 SINE MIR 5 142 -66 291 185 33 0 chr18 46521272 46521364 -40156184 + (TA)n Simple_repeat Simple_repeat 2 96 0 21 57 0 0 chr18 46521613 46521648 -40155900 + AT_rich Low_complexity Low_complexity 1 35 0 683 335 183 19 chr18 46521760 46522203 -40155345 + L3 LINE CR1 758 1323 -254 2230 111 3 0 chr18 46522203 46522501 -40155047 + AluSg1 SINE Alu 1 299 -10 683 335 183 19 chr18 46522501 46522646 -40154902 + L3 LINE CR1 1323 1443 -134 339 212 8 25 chr18 46522689 46522807 -40154741 + GA-rich Low_complexity Low_complexity 2 117 0 351 44 0 0 chr18 46523119 46523164 -40154384 + (TA)n Simple_repeat Simple_repeat 1 45 0 182 264 19 38 chr18 46523305 46523358 -40154190 - L3 LINE CR1 -34 1543 1492 458 284 1 42 chr18 46523545 46523687 -40153861 + MIR SINE MIR 23 158 -63 2194 112 0 16 chr18 46523763 46524068 -40153480 - AluSq SINE Alu -13 300 1 1469 215 141 21 chr18 46524546 46524913 -40152635 + MLT1D LTR MaLR 22 450 -55 279 0 0 0 chr18 46524913 46524944 -40152604 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1469 215 141 21 chr18 46524944 46525008 -40152540 + MLT1D LTR MaLR 450 505 0 242 312 194 11 chr18 46525303 46525396 -40152152 + MIR3 SINE MIR 7 116 -92 372 22 0 0 chr18 46525400 46525445 -40152103 + (TG)n Simple_repeat Simple_repeat 2 46 0 1429 204 74 33 chr18 46525445 46525782 -40151766 - MLT1C LTR MaLR -9 458 99 1630 218 87 42 chr18 46525782 46526278 -40151270 - MLT2B1 LTR ERVL -2 518 1 1429 204 74 33 chr18 46526278 46526361 -40151187 - MLT1C LTR MaLR -368 99 21 276 347 20 0 chr18 46526471 46526618 -40150930 + MER103 DNA DNA 15 164 -2 2396 61 0 7 chr18 46526796 46527117 -40150431 + AluY SINE Alu 1 319 0 22 0 0 0 chr18 46527142 46527164 -40150384 + AT_rich Low_complexity Low_complexity 1 22 0 231 279 108 36 chr18 46529041 46529152 -40148396 + MIR SINE MIR 136 254 -8 266 267 74 44 chr18 46529216 46529351 -40148197 - L2 LINE L2 0 3313 3175 190 361 14 0 chr18 46529791 46529863 -40147685 + L3 LINE CR1 1493 1565 -12 4384 135 57 99 chr18 46529864 46531032 -40146516 + pTR5 LTR ERV1 741 2025 -413 350 194 31 20 chr18 46531032 46531130 -40146418 + LTR30 LTR ERV1 544 642 -80 1422 104 5 5 chr18 46531132 46531354 -40146194 + pTR5 LTR ERV1 171 392 -2046 316 259 125 36 chr18 46532114 46532226 -40145322 + MIR SINE MIR 23 144 -64 22 35 0 0 chr18 46533053 46533082 -40144466 + AT_rich Low_complexity Low_complexity 1 29 0 368 325 107 34 chr18 46533869 46534223 -40143325 + MLT1I LTR MaLR 1 380 -29 2320 91 0 3 chr18 46534660 46534956 -40142592 + AluSg SINE Alu 1 295 -15 331 333 29 0 chr18 46535484 46535586 -40141962 - L2 LINE L2 0 3272 3168 207 334 57 114 chr18 46535587 46535973 -40141575 + L2 LINE L2 2613 2976 -338 268 313 36 47 chr18 46536088 46536280 -40141268 + L2 LINE L2 3115 3304 -9 233 341 44 0 chr18 46536602 46536693 -40140855 + MIR3 SINE MIR 60 154 -54 202 243 57 43 chr18 46536750 46536820 -40140728 + MER5B DNA MER1_type 92 162 -16 384 147 0 0 chr18 46537017 46537092 -40140456 + (TG)n Simple_repeat Simple_repeat 2 76 0 1278 166 26 37 chr18 46587213 46587484 -40090064 - Tigger2a DNA MER2_type -166 268 1 246 222 32 0 chr18 46589075 46589138 -40088410 + (TA)n Simple_repeat Simple_repeat 1 65 0 238 228 13 51 chr18 46589620 46589699 -40087849 - MIR SINE MIR 0 262 187 274 336 16 16 chr18 46591135 46591257 -40086291 - MIR SINE MIR -67 141 20 816 160 7 0 chr18 46591391 46591541 -40086007 - L1MA5 LINE L1 0 6300 6150 23 33 0 0 chr18 46591714 46591744 -40085804 + AT_rich Low_complexity Low_complexity 1 30 0 1501 261 81 16 chr18 46591922 46592488 -40085060 - L1MC4a LINE L1 -1889 5919 5317 1074 260 34 34 chr18 46592913 46593287 -40084261 - MLT1A2 LTR MaLR -2 465 1 190 231 0 0 chr18 46594244 46594283 -40083265 - MIR SINE MIR -62 146 108 186 425 8 15 chr18 46596181 46596315 -40081233 - MIR SINE MIR -123 139 7 2123 113 0 7 chr18 46596361 46596654 -40080894 - AluSx SINE Alu -21 291 1 488 283 92 23 chr18 46598043 46598216 -40079332 - MLT1J LTR MaLR -302 209 25 2208 118 0 22 chr18 46598720 46599034 -40078514 - AluSc SINE Alu 0 309 3 21 21 0 64 chr18 46599133 46599180 -40078368 + AT_rich Low_complexity Low_complexity 1 44 0 208 158 0 26 chr18 46599383 46599421 -40078127 + CT-rich Low_complexity Low_complexity 4 40 0 281 363 0 0 chr18 46599434 46599514 -40078034 + L2 LINE L2 3146 3225 -47 21 0 0 0 chr18 46599618 46599639 -40077909 + AT_rich Low_complexity Low_complexity 1 21 0 553 234 60 60 chr18 46599834 46600215 -40077333 - L1MDb LINE L1 -2925 3290 2910 793 169 0 22 chr18 46600329 46600465 -40077083 - FLAM_C SINE Alu 0 133 1 419 336 62 45 chr18 46600489 46600876 -40076672 - L1MDb LINE L1 -4982 1223 812 228 212 0 30 chr18 46600909 46600975 -40076573 - L1MA4 LINE L1 -5 6295 6232 * 749 210 65 3 chr18 46600944 46601166 -40076382 - L1MA4 LINE L1 -90 6215 5982 255 271 0 14 chr18 46601932 46602002 -40075546 - L1MDb LINE L1 -6299 97 29 30 0 0 0 chr18 46604133 46604163 -40073385 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr18 46604313 46604340 -40073208 + AT_rich Low_complexity Low_complexity 1 27 0 360 0 0 0 chr18 46604378 46604418 -40073130 + (T)n Simple_repeat Simple_repeat 1 40 0 467 259 9 26 chr18 46604560 46604676 -40072872 - MER81 DNA DNA 0 114 1 1657 213 15 0 chr18 46606103 46606436 -40071112 + MER58B DNA MER1_type 3 340 -1 183 80 0 0 chr18 46606474 46606499 -40071049 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2157 126 0 19 chr18 46607328 46607645 -40069903 + AluSx SINE Alu 2 312 0 180 310 70 39 chr18 46607801 46607930 -40069618 + MIR3 SINE MIR 31 163 -45 293 241 158 30 chr18 46607986 46608119 -40069429 - MIR SINE MIR -1 261 112 186 43 0 0 chr18 46609760 46609783 -40067765 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 200 261 0 0 chr18 46610405 46610451 -40067097 - MIR SINE MIR -146 62 17 219 235 69 69 chr18 46610468 46610570 -40066978 + MIR SINE MIR 81 182 -80 180 0 0 0 chr18 46610828 46610848 -40066700 + (T)n Simple_repeat Simple_repeat 1 20 0 370 279 130 12 chr18 46611792 46612046 -40065502 - L1ME LINE L1 -313 5808 5525 1304 182 8 36 chr18 46612991 46613244 -40064304 - AluJo SINE Alu -66 246 1 227 114 23 0 chr18 46613548 46613592 -40063956 + (TA)n Simple_repeat Simple_repeat 1 45 0 2195 117 3 3 chr18 46613837 46614144 -40063404 - AluSx SINE Alu -5 307 1 1102 280 94 21 chr18 46614144 46614764 -40062784 - L2 LINE L2 -10 3303 2653 279 54 0 0 chr18 46614878 46614915 -40062633 + (TC)n Simple_repeat Simple_repeat 2 38 0 227 223 62 40 chr18 46617619 46617700 -40059848 - MIR SINE MIR -60 148 69 220 234 0 0 chr18 46617866 46617913 -40059635 + MIR SINE MIR 206 252 -10 2057 86 23 33 chr18 46617917 46618220 -40059328 + AluSq SINE Alu 1 300 -13 22 35 0 0 chr18 46618241 46618270 -40059278 + AT_rich Low_complexity Low_complexity 1 29 0 335 207 0 0 chr18 46618580 46618638 -40058910 - MER2 DNA MER2_type -280 65 8 261 0 0 0 chr18 46618982 46619011 -40058537 + (TA)n Simple_repeat Simple_repeat 1 29 0 201 154 0 0 chr18 46619067 46619106 -40058442 + (TG)n Simple_repeat Simple_repeat 1 39 0 56 29 0 0 chr18 46619213 46619283 -40058265 + GC_rich Low_complexity Low_complexity 1 70 0 21 82 0 0 chr18 46619455 46619504 -40058044 + GC_rich Low_complexity Low_complexity 1 49 0 240 224 0 40 chr18 46621060 46621136 -40056412 + CT-rich Low_complexity Low_complexity 3 75 0 21 0 0 0 chr18 46623678 46623699 -40053849 + AT_rich Low_complexity Low_complexity 1 21 0 2335 90 0 0 chr18 46623699 46623988 -40053560 - AluSq SINE Alu -24 289 1 412 268 21 42 chr18 46624571 46624713 -40052835 + MIR SINE MIR 53 191 -71 1949 94 80 7 chr18 46627519 46627795 -40049753 - AluSg SINE Alu -14 296 1 318 125 38 0 chr18 46628919 46628999 -40048549 + CT-rich Low_complexity Low_complexity 2 84 0 781 148 0 13 chr18 46629079 46629228 -40048320 + (TTCC)n Simple_repeat Simple_repeat 3 149 0 1651 148 35 60 chr18 46629230 46629548 -40048000 - AluJo SINE Alu 0 312 3 2287 92 3 3 chr18 46630671 46630974 -40046574 - AluY SINE Alu -8 303 1 180 345 193 0 chr18 46631001 46631120 -40046428 - L3 LINE CR1 -76 1501 1360 592 342 30 36 chr18 46631125 46631429 -40046119 - L3 LINE CR1 -354 1223 922 193 273 36 0 chr18 46631804 46631859 -40045689 + L2 LINE L2 3174 3230 -83 2235 102 0 10 chr18 46631924 46632219 -40045329 - AluSx SINE Alu -20 292 1 209 200 0 0 chr18 46632321 46632356 -40045192 + (TG)n Simple_repeat Simple_repeat 1 35 0 217 261 23 131 chr18 46632677 46632807 -40044741 - MIR SINE MIR -60 148 33 1981 134 7 0 chr18 46634273 46634571 -40042977 - AluSx SINE Alu -4 308 9 326 283 53 26 chr18 46634686 46634838 -40042710 - MIR SINE MIR -35 227 72 216 67 0 0 chr18 46635632 46635662 -40041886 + (TG)n Simple_repeat Simple_repeat 1 30 0 222 37 0 0 chr18 46636356 46636383 -40041165 + (TTA)n Simple_repeat Simple_repeat 1 27 0 1407 208 15 22 chr18 46636393 46636667 -40040881 - AluJb SINE Alu -40 272 1 188 268 12 37 chr18 46637825 46637907 -40039641 + MIR3 SINE MIR 106 185 -23 304 290 149 0 chr18 46638059 46638166 -40039382 + MIR SINE MIR 13 135 -127 190 346 13 0 chr18 46638671 46638749 -40038799 - L3 LINE CR1 -7 1570 1492 2369 119 24 19 chr18 46638859 46639230 -40038318 - THE1C LTR MaLR -2 373 1 292 229 0 62 chr18 46639587 46639683 -40037865 - MIR SINE MIR -66 196 107 217 221 78 26 chr18 46641088 46641165 -40036383 - MIR SINE MIR -78 130 50 206 346 59 0 chr18 46641457 46641558 -40035990 - L2 LINE L2 -7 3306 3200 181 321 18 71 chr18 46641698 46641866 -40035682 - L3 LINE CR1 -199 1378 1220 230 316 26 0 chr18 46641907 46642021 -40035527 - MIR3 SINE MIR 0 208 92 249 307 33 20 chr18 46642105 46642255 -40035293 - L3 LINE CR1 -489 1088 937 206 291 0 0 chr18 46642269 46642324 -40035224 + MER5B DNA MER1_type 1 55 -123 318 357 130 0 chr18 46642326 46642480 -40035068 + MER5B DNA MER1_type 4 177 -1 2330 114 0 0 chr18 46642657 46642997 -40034551 + AluSc SINE Alu 1 340 0 433 303 45 8 chr18 46643517 46643649 -40033899 + L2 LINE L2 3129 3265 -7 39 74 0 0 chr18 46643978 46644059 -40033489 + AT_rich Low_complexity Low_complexity 1 81 0 306 182 0 0 chr18 46644078 46644133 -40033415 + L1MC4 LINE L1 6652 6706 -1336 1892 159 55 3 chr18 46644133 46644460 -40033088 - MER7A DNA MER2_type 0 346 5 261 0 0 0 chr18 46644461 46644490 -40033058 + (CA)n Simple_repeat Simple_repeat 2 30 0 221 283 200 7 chr18 46644605 46644750 -40032798 + MIR3 SINE MIR 30 202 -6 29 0 0 0 chr18 46645989 46646018 -40031530 + AT_rich Low_complexity Low_complexity 1 29 0 201 130 0 56 chr18 46646656 46646710 -40030838 + (CGGGGG)n Simple_repeat Simple_repeat 1 51 0 246 62 0 0 chr18 46646717 46646749 -40030799 + (CGG)n Simple_repeat Simple_repeat 3 34 0 327 113 0 0 chr18 46646904 46646957 -40030591 + (A)n Simple_repeat Simple_repeat 1 53 0 201 309 11 21 chr18 46647209 46647303 -40030245 - L2 LINE L2 -219 3053 2961 202 122 0 24 chr18 46648526 46648567 -40028981 - MIR SINE MIR -72 136 97 437 290 49 11 chr18 46648682 46648865 -40028683 + MIR SINE MIR 29 218 -44 380 285 24 48 chr18 46649346 46649511 -40028037 - MIR3 SINE MIR -16 192 32 310 200 152 61 chr18 46649761 46649926 -40027622 - MIR SINE MIR -18 244 65 228 314 0 0 chr18 46650069 46650120 -40027428 - L2 LINE L2 -86 3186 3136 216 304 15 74 chr18 46650258 46650393 -40027155 - L2 LINE L2 -226 3046 2920 376 271 11 83 chr18 46650764 46650945 -40026603 - L2 LINE L2 -3 3310 3143 720 231 36 102 chr18 46651667 46651781 -40025767 + MER63A DNA MER1_type 1 94 -1594 2051 97 0 0 chr18 46651781 46652040 -40025508 - AluSq SINE Alu -50 263 5 720 231 36 102 chr18 46652040 46652150 -40025398 + MER63A DNA MER1_type 94 210 0 493 319 58 29 chr18 46652668 46653117 -40024431 + HAL1b LINE L1 77 538 -810 23 33 0 0 chr18 46653335 46653365 -40024183 + AT_rich Low_complexity Low_complexity 1 30 0 281 327 25 44 chr18 46653656 46653815 -40023733 - L2 LINE L2 -1 3271 3116 375 276 94 0 chr18 46653872 46653999 -40023549 - MER5A DNA MER1_type 0 189 51 188 356 11 11 chr18 46654322 46654409 -40023139 - MIR SINE MIR -103 105 19 210 347 29 83 chr18 46657008 46657250 -40020298 - L3 LINE CR1 -8 1569 1341 217 287 21 21 chr18 46659976 46660070 -40017478 + MIR3 SINE MIR 104 197 -11 899 85 78 0 chr18 46662788 46662917 -40014631 + MER85 DNA T2_type 1 139 0 373 248 47 47 chr18 46663149 46663278 -40014270 - MIR3 SINE MIR -12 196 68 491 271 68 40 chr18 46666129 46666380 -40011168 - MIR SINE MIR 0 262 5 297 0 0 0 chr18 46666968 46667001 -40010547 + (TG)n Simple_repeat Simple_repeat 2 34 0 229 295 31 39 chr18 46668462 46668591 -40008957 - L2 LINE L2 -213 3059 2932 894 272 29 0 chr18 46668714 46668957 -40008591 - MIR SINE MIR -5 257 8 256 389 92 11 chr18 46669009 46669443 -40008105 - L2 LINE L2 -575 2739 2271 765 238 83 95 chr18 46670603 46671086 -40006462 - MLT1H1 LTR MaLR 0 555 79 324 70 0 0 chr18 46671413 46671456 -40006092 + (CA)n Simple_repeat Simple_repeat 2 44 0 297 240 15 135 chr18 46675036 46675236 -40002312 + MIR3 SINE MIR 32 207 -1 1699 173 22 7 chr18 46675883 46676160 -40001388 + AluJo SINE Alu 1 281 -31 270 303 11 11 chr18 46676747 46676836 -40000712 + L2 LINE L2 3184 3272 0 330 328 62 0 chr18 46677330 46677458 -40000090 + MIR3 SINE MIR 31 166 -42 227 276 0 0 chr18 46677471 46677529 -40000019 + L3 LINE CR1 1392 1449 -128 2392 96 0 0 chr18 46678276 46678579 -39998969 + AluSx SINE Alu 5 307 -5 1741 186 78 55 chr18 46678619 46679107 -39998441 - MLT1D LTR MaLR -6 499 1 192 289 74 58 chr18 46680192 46680313 -39997235 + MIR SINE MIR 124 246 -16 421 324 63 0 chr18 46680899 46681041 -39996507 - L2 LINE L2 -1 3271 3121 206 333 30 0 chr18 46681972 46682071 -39995477 - MIR SINE MIR -73 135 34 376 264 12 0 chr18 46682717 46682880 -39994668 + CT-rich Low_complexity Low_complexity 1 165 0 192 77 0 0 chr18 46682923 46682949 -39994599 + (TC)n Simple_repeat Simple_repeat 2 27 0 192 40 0 0 chr18 46684550 46684575 -39992973 + (A)n Simple_repeat Simple_repeat 1 25 0 204 288 41 0 chr18 46685007 46685080 -39992468 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 349 333 9 0 chr18 46685149 46685260 -39992288 + MIR SINE MIR 30 141 -67 225 158 0 0 chr18 46686115 46686153 -39991395 + MIR SINE MIR 221 258 -4 189 323 0 31 chr18 46686370 46686435 -39991113 + L2 LINE L2 3201 3263 -9 277 296 29 47 chr18 46687160 46687332 -39990216 - MIR3 SINE MIR -24 184 16 393 304 34 0 chr18 46687497 46687645 -39989903 + MER103 DNA DNA 1 153 -13 353 105 0 47 chr18 46687916 46688002 -39989546 + (GGAA)n Simple_repeat Simple_repeat 4 85 0 247 231 115 0 chr18 46689478 46689556 -39987992 - HsTC2 DNA Tc2 -1811 87 1 1892 180 24 34 chr18 46689923 46690301 -39987247 - MLT1A2 LTR MaLR 0 374 1 1325 225 74 21 chr18 46691529 46691867 -39985681 - MLT1A2 LTR MaLR -1 373 18 259 287 66 19 chr18 46692734 46692887 -39984661 - MIR SINE MIR -39 169 5 283 324 40 34 chr18 46693735 46693911 -39983637 - L3 LINE CR1 -157 1420 1244 244 366 103 5 chr18 46694170 46694364 -39983184 - L3 LINE CR1 -783 794 582 2178 176 35 115 chr18 46695012 46695614 -39981934 + MLT2B3 LTR ERVL 1 554 0 282 136 30 45 chr18 46695637 46695703 -39981845 + LTR49 LTR ERV1 459 523 -72 2149 116 0 13 chr18 46695714 46696017 -39981531 + AluSc SINE Alu 1 299 -10 447 164 21 107 chr18 46696017 46696146 -39981402 + MER103 DNA DNA 47 165 -1 389 260 226 14 chr18 46697363 46697571 -39979977 - MIR SINE MIR -3 259 8 2546 57 0 0 chr18 46698165 46698462 -39979086 - AluY SINE Alu -14 297 1 405 259 37 111 chr18 46699584 46699773 -39977775 + MER5B DNA MER1_type 4 178 0 1456 186 24 0 chr18 46700916 46701206 -39976342 - L1MA6 LINE L1 -4 6296 6000 190 359 75 19 chr18 46701613 46701719 -39975829 - MIR SINE MIR -77 131 20 208 292 54 15 chr18 46701935 46702065 -39975483 + L2 LINE L2 2921 3055 -258 207 289 49 28 chr18 46702427 46702569 -39974979 + L2 LINE L2 2921 3065 -248 952 235 114 10 chr18 46703985 46704291 -39973257 + L2 LINE L2 1947 2284 -1030 593 313 151 5 chr18 46704297 46704660 -39972888 + L2 LINE L2 2669 3086 -227 196 29 0 57 chr18 46704696 46704731 -39972817 + (TTC)n Simple_repeat Simple_repeat 2 34 0 2139 114 10 3 chr18 46704737 46705043 -39972505 - AluY SINE Alu -3 308 1 661 219 65 35 chr18 46705050 46705251 -39972297 + L2 LINE L2 3101 3307 -6 215 197 53 40 chr18 46706543 46706619 -39970929 + MIR SINE MIR 77 153 -109 1815 164 28 45 chr18 46706619 46706963 -39970585 + L1MB3 LINE L1 5794 6132 -51 638 216 8 0 chr18 46706963 46707088 -39970460 + FLAM_A SINE Alu 1 126 -7 1815 164 28 45 chr18 46707088 46707140 -39970408 + L1MB3 LINE L1 6132 6183 0 497 277 24 61 chr18 46707262 46707475 -39970073 + L3 LINE CR1 1261 1465 -112 255 103 35 17 chr18 46708645 46708703 -39968845 + (TG)n Simple_repeat Simple_repeat 1 59 0 216 0 0 0 chr18 46710850 46710874 -39966674 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 443 255 0 0 chr18 46711368 46711462 -39966086 + MER5A DNA MER1_type 29 122 -67 306 277 20 20 chr18 46711373 46711474 -39966074 - MER5A DNA MER1_type -22 167 67 * 425 329 88 9 chr18 46712922 46713138 -39964410 + MIR SINE MIR 28 260 -2 327 25 0 0 chr18 46714065 46714105 -39963443 + (TC)n Simple_repeat Simple_repeat 2 41 0 297 0 0 0 chr18 46714110 46714143 -39963405 + (TG)n Simple_repeat Simple_repeat 2 34 0 339 149 0 0 chr18 46714616 46714690 -39962858 + (TG)n Simple_repeat Simple_repeat 2 75 0 188 304 26 43 chr18 46714899 46715014 -39962534 - L3 LINE CR1 -1 1576 1464 * 192 392 0 0 chr18 46715002 46715076 -39962472 - MIR SINE MIR -173 89 16 259 375 59 17 chr18 46715448 46715685 -39961863 - L2 LINE L2 -2 3270 3024 201 353 16 49 chr18 46716039 46716161 -39961387 - MIR3 SINE MIR 0 208 91 1463 151 0 5 chr18 46717305 46717523 -39960025 + AluJo SINE Alu 1 217 -95 231 178 0 0 chr18 46717524 46717569 -39959979 + AluJo SINE Alu 249 293 -8 299 167 15 0 chr18 46719839 46719905 -39957643 + GA-rich Low_complexity Low_complexity 2 68 0 471 155 0 0 chr18 46720183 46720267 -39957281 + (CA)n Simple_repeat Simple_repeat 2 85 0 447 292 37 113 chr18 46720881 46721576 -39955972 - L2 LINE L2 0 3272 2638 401 136 0 12 chr18 46721720 46721801 -39955747 + (TC)n Simple_repeat Simple_repeat 2 81 0 284 269 26 0 chr18 46721828 46721906 -39955642 + L2 LINE L2 3193 3272 0 220 354 82 0 chr18 46722018 46722176 -39955372 + MIR3 SINE MIR 37 207 -1 229 79 0 0 chr18 46723193 46723231 -39954317 - L1MA3 LINE L1 -3 6302 6265 301 350 11 54 chr18 46723930 46724116 -39953432 - MIR SINE MIR -56 206 29 558 322 111 31 chr18 46724594 46725007 -39952541 + L2 LINE L2 2852 3297 -16 192 422 12 12 chr18 46725042 46725125 -39952423 - MIR SINE MIR -110 98 16 2873 16 0 0 chr18 46727844 46728157 -39949391 + AluYb8 SINE Alu 1 313 -5 1975 154 0 22 chr18 46729055 46729374 -39948174 - AluJb SINE Alu 0 312 1 348 350 89 6 chr18 46729451 46729631 -39947917 + MIR3 SINE MIR 8 202 -6 486 233 119 25 chr18 46730900 46731059 -39946489 - MER5B DNA MER1_type -4 174 1 25 0 0 0 chr18 46731198 46731223 -39946325 + AT_rich Low_complexity Low_complexity 1 25 0 822 222 28 0 chr18 46731419 46731599 -39945949 + MER20 DNA MER1_type 33 217 -2 225 182 23 0 chr18 46731676 46731720 -39945828 + (CA)n Simple_repeat Simple_repeat 2 46 0 285 89 0 0 chr18 46731992 46732037 -39945511 + (GA)n Simple_repeat Simple_repeat 1 45 0 249 354 123 5 chr18 46732221 46732416 -39945132 + MIR SINE MIR 32 249 -13 225 225 0 0 chr18 46733475 46733515 -39944033 + MIR SINE MIR 114 153 -55 514 233 22 33 chr18 46733522 46733702 -39943846 - MER5B DNA MER1_type 0 178 1 914 188 11 0 chr18 46733710 46733891 -39943657 + MER5A DNA MER1_type 1 183 -6 244 299 28 47 chr18 46734788 46734895 -39942653 - MIR3 SINE MIR -22 186 82 447 231 71 35 chr18 46736675 46736844 -39940704 - MER5B DNA MER1_type 0 178 4 261 242 0 0 chr18 46736846 46736908 -39940640 - MIR3 SINE MIR -47 161 100 213 333 0 9 chr18 46736948 46737053 -39940495 - L3 LINE CR1 -310 1267 1164 270 136 0 0 chr18 46737082 46737126 -39940422 + (CA)n Simple_repeat Simple_repeat 2 45 0 360 246 90 30 chr18 46738546 46738680 -39938868 - MIR3 SINE MIR -7 201 60 594 283 74 74 chr18 46739807 46740185 -39937363 - LTR33 LTR ERVL -88 433 56 3963 43 2 6 chr18 46741078 46741561 -39935987 + L1PA5 LINE L1 5671 6151 -3 224 278 0 0 chr18 46741835 46741889 -39935659 + (TG)n Simple_repeat Simple_repeat 2 55 0 207 235 0 37 chr18 46743954 46744035 -39933513 + T-rich Low_complexity Low_complexity 3 80 0 24 0 0 0 chr18 46745507 46745531 -39932017 + AT_rich Low_complexity Low_complexity 1 24 0 306 87 0 0 chr18 46745752 46745798 -39931750 + (TG)n Simple_repeat Simple_repeat 2 47 0 207 0 0 0 chr18 46746970 46746993 -39930555 + (T)n Simple_repeat Simple_repeat 1 23 0 528 242 45 67 chr18 46746993 46747171 -39930377 - FAM SINE Alu 0 49 1 898 206 50 0 chr18 46747407 46747567 -39929981 - FAM SINE Alu -7 168 1 207 0 0 0 chr18 46748202 46748225 -39929323 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 352 247 241 6 chr18 46748828 46748994 -39928554 + LTR33 LTR ERVL 314 518 -3 213 301 14 14 chr18 46751028 46751101 -39926447 + MIR3 SINE MIR 129 201 -7 214 368 85 0 chr18 46751719 46751825 -39925723 - MIR3 SINE MIR -54 154 40 181 244 85 24 chr18 46754269 46754351 -39923197 + MIR3 SINE MIR 115 201 -7 182 278 19 0 chr18 46756501 46756555 -39920993 - MIR SINE MIR -72 136 82 251 290 54 0 chr18 46756579 46756672 -39920876 + MIR3 SINE MIR 109 206 -2 182 310 23 23 chr18 46757992 46758079 -39919469 - MIR SINE MIR -78 130 44 2231 101 0 3 chr18 46758145 46758441 -39919107 + AluSg SINE Alu 11 305 -5 217 330 10 21 chr18 46758812 46758909 -39918639 - MIR SINE MIR -146 116 21 366 261 34 8 chr18 46759016 46759135 -39918413 - MIR3 SINE MIR 0 208 87 306 50 0 0 chr18 46759472 46759512 -39918036 + (CA)n Simple_repeat Simple_repeat 2 41 0 318 26 0 0 chr18 46759702 46759741 -39917807 + (TG)n Simple_repeat Simple_repeat 2 40 0 307 255 39 59 chr18 46761435 46761537 -39916011 + L2 LINE L2 3160 3259 -13 183 318 0 0 chr18 46761553 46761597 -39915951 - L2 LINE L2 -86 3186 3143 229 300 146 15 chr18 46761803 46761933 -39915615 + MIR3 SINE MIR 5 151 -57 377 328 15 0 chr18 46762450 46762581 -39914967 + L3 LINE CR1 1292 1424 -153 1743 116 94 4 chr18 46763601 46763868 -39913680 + AluSx SINE Alu 1 291 -21 232 284 0 15 chr18 46765472 46765539 -39912009 + GA-rich Low_complexity Low_complexity 4 69 0 458 332 84 5 chr18 46766557 46766789 -39910759 + MIR SINE MIR 4 254 -8 312 290 76 28 chr18 46768747 46768892 -39908656 - MARNA DNA Mariner -34 552 401 1391 224 46 35 chr18 46769390 46769760 -39907788 + MLT1A2 LTR MaLR 1 374 0 261 255 85 28 chr18 46770818 46770924 -39906624 + MER103 DNA DNA 13 124 -42 377 305 51 15 chr18 46772367 46772564 -39904984 + MIR SINE MIR 59 262 0 21 0 0 0 chr18 46772604 46772625 -39904923 + AT_rich Low_complexity Low_complexity 1 21 0 344 304 17 0 chr18 46773160 46773275 -39904273 - MER5A DNA MER1_type -70 119 3 408 246 162 42 chr18 46773942 46774084 -39903464 + MER5A DNA MER1_type 20 178 -11 200 278 30 83 chr18 46775468 46775601 -39901947 - L2 LINE L2 -10 3262 3137 273 176 29 0 chr18 46776357 46776425 -39901123 + MER53 DNA DNA 120 189 0 224 276 11 46 chr18 46776495 46776582 -39900966 - MIR SINE MIR -67 141 58 324 70 0 0 chr18 46777305 46777348 -39900200 + (CACTC)n Simple_repeat Simple_repeat 3 45 0 249 33 0 0 chr18 46780228 46780258 -39897290 + (CTG)n Simple_repeat Simple_repeat 3 32 0 604 275 6 34 chr18 46781587 46781765 -39895783 - MER5B DNA MER1_type 0 178 6 184 301 53 53 chr18 46781788 46781833 -39895715 - MIR SINE MIR -70 138 94 2483 193 69 15 chr18 46781833 46782368 -39895180 - MLT1F1 LTR MaLR 0 567 4 184 301 53 53 chr18 46782368 46782435 -39895113 - MIR SINE MIR -113 95 26 367 278 96 9 chr18 46784048 46784163 -39893385 + Charlie8 DNA MER1_type 1 125 -2292 279 133 0 0 chr18 46785152 46785197 -39892351 + (CA)n Simple_repeat Simple_repeat 1 45 0 208 371 10 0 chr18 46785333 46785430 -39892118 - MIR SINE MIR -136 126 29 1321 148 62 8 chr18 46787089 46787346 -39890202 - L1MB7 LINE L1 -16 6168 5898 202 213 0 21 chr18 46787478 46787525 -39890023 + L2 LINE L2 3221 3266 -6 697 256 81 78 chr18 46788411 46788794 -39888754 - L2 LINE L2 -5 3308 2925 247 323 0 11 chr18 46788793 46788886 -39888662 + MER5B DNA MER1_type 9 100 -78 * 288 0 0 0 chr18 46788897 46788929 -39888619 + (TG)n Simple_repeat Simple_repeat 2 33 0 320 333 42 11 chr18 46788993 46789182 -39888366 - L2 LINE L2 -410 2904 2710 442 370 12 12 chr18 46790130 46790303 -39887245 + MIR3 SINE MIR 10 182 -26 225 0 0 0 chr18 46790494 46790519 -39887029 + (GA)n Simple_repeat Simple_repeat 1 25 0 420 307 109 5 chr18 46790519 46790711 -39886837 + MIR SINE MIR 50 261 -1 2358 119 0 0 chr18 46791184 46791494 -39886054 - AluSx SINE Alu -1 311 2 255 61 0 0 chr18 46791933 46791966 -39885582 + (CAT)n Simple_repeat Simple_repeat 3 35 0 201 355 0 0 chr18 46792400 46792462 -39885086 + CT-rich Low_complexity Low_complexity 2 63 0 181 322 0 17 chr18 46793486 46793545 -39884003 - MIR SINE MIR -62 146 89 215 167 39 115 chr18 46794304 46794382 -39883166 - MIR SINE MIR -78 184 113 287 294 16 56 chr18 46794477 46794603 -39882945 - MIR SINE MIR -71 137 17 492 322 38 53 chr18 46794619 46795016 -39882532 + L2 LINE L2 2897 3287 -26 299 264 84 22 chr18 46795358 46795536 -39882012 + L2 LINE L2 2333 2521 -793 722 285 78 29 chr18 46795683 46796094 -39881454 + L2 LINE L2 2805 3235 -78 218 81 27 0 chr18 46796114 46796151 -39881397 + (TTTTTG)n Simple_repeat Simple_repeat 3 40 0 804 231 60 5 chr18 46796369 46796568 -39880980 - MER63A DNA MER1_type 0 210 1 289 250 176 23 chr18 46796992 46797168 -39880380 + L3 LINE CR1 1338 1540 -37 22 0 0 0 chr18 46799391 46799413 -39878135 + AT_rich Low_complexity Low_complexity 1 22 0 462 170 0 0 chr18 46799818 46799912 -39877636 + GA-rich Low_complexity Low_complexity 1 94 0 401 295 54 26 chr18 46800275 46800487 -39877061 + MIR SINE MIR 7 230 -32 2054 154 3 3 chr18 46801289 46801601 -39875947 + AluSq SINE Alu 1 312 -1 1838 126 30 7 chr18 46802051 46802322 -39875226 - AluY SINE Alu 0 311 35 204 256 70 47 chr18 46803714 46803800 -39873748 - MIR SINE MIR -64 144 57 216 0 0 0 chr18 46803808 46803832 -39873716 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 259 198 58 35 chr18 46804172 46804258 -39873290 + MIR3 SINE MIR 93 180 -28 181 237 119 0 chr18 46807061 46807120 -39870428 - L2 LINE L2 0 3313 3248 324 331 61 17 chr18 46807843 46808024 -39869524 + MIR SINE MIR 20 208 -54 236 340 64 11 chr18 46808337 46808431 -39869117 + L2 LINE L2 3127 3225 -47 1991 114 0 0 chr18 46809236 46809491 -39868057 + AluSp SINE Alu 1 255 -58 279 0 0 0 chr18 46809491 46809522 -39868026 + (GA)n Simple_repeat Simple_repeat 1 31 0 255 31 0 0 chr18 46809521 46809553 -39867995 + (GGAA)n Simple_repeat Simple_repeat 1 32 0 * 429 238 110 12 chr18 46813009 46813173 -39864375 - L1ME4a LINE L1 0 6121 5942 274 284 83 53 chr18 46814026 46814195 -39863353 + MIR SINE MIR 64 237 -25 230 225 28 28 chr18 46814582 46814653 -39862895 - L1MC5 LINE L1 -49 7912 7842 467 184 0 0 chr18 46814665 46814741 -39862807 + MER63 DNA MER1_type 674 749 -313 522 251 32 41 chr18 46814888 46815107 -39862441 - L1MC5 LINE L1 -184 7777 7561 2172 98 3 35 chr18 46816016 46816332 -39861216 + AluSc SINE Alu 1 306 -3 757 277 59 29 chr18 46816432 46816670 -39860878 - MIR SINE MIR -11 251 7 516 259 54 0 chr18 46817181 46817328 -39860220 - MER5B DNA MER1_type -6 172 18 197 305 61 24 chr18 46817596 46817678 -39859870 - MIR SINE MIR -106 102 18 308 270 210 0 chr18 46817902 46818002 -39859546 + MER5C DNA MER1_type 4 124 -200 217 296 65 9 chr18 46818029 46818137 -39859411 + MER5C DNA MER1_type 211 324 0 201 300 0 14 chr18 46819006 46819076 -39858472 + MIR3 SINE MIR 140 208 0 640 241 132 9 chr18 46820023 46820243 -39857305 + MIR SINE MIR 5 251 -11 2586 162 14 16 chr18 46821267 46821694 -39855854 - MSTB LTR MaLR 0 426 1 266 272 42 103 chr18 46824485 46824655 -39852893 - MIR3 SINE MIR -62 146 10 214 324 62 35 chr18 46824686 46824831 -39852717 + L3 LINE CR1 1241 1389 -188 413 348 49 1 chr18 46824935 46825141 -39852407 + MIR SINE MIR 37 250 -12 288 278 106 7 chr18 46825680 46825831 -39851717 - L1ME4a LINE L1 -7 6114 5949 234 356 44 0 chr18 46825904 46825994 -39851554 + MIR SINE MIR 50 143 -65 230 271 59 8 chr18 46826061 46826179 -39851369 + MER103 DNA DNA 11 134 -32 201 39 0 0 chr18 46826620 46826646 -39850902 + (A)n Simple_repeat Simple_repeat 1 26 0 217 316 68 17 chr18 46826936 46827053 -39850495 + MIR3 SINE MIR 73 195 -13 351 0 0 0 chr18 46827532 46827571 -39849977 + (TTA)n Simple_repeat Simple_repeat 1 39 0 437 290 150 5 chr18 46827806 46828013 -39849535 + MIR SINE MIR 20 256 -6 1506 159 28 62 chr18 46830723 46831044 -39846504 - L1MA8 LINE L1 0 6291 5982 415 259 35 69 chr18 46831536 46831710 -39845838 - MIR SINE MIR -88 174 7 2129 132 75 32 chr18 46831730 46832078 -39845470 - THE1B LTR MaLR -1 363 1 213 250 21 0 chr18 46832162 46832210 -39845338 - L2 LINE L2 -3 3310 3262 1041 336 59 30 chr18 46833327 46833901 -39843647 - L3 LINE CR1 -87 1490 900 710 278 39 26 chr18 46834027 46834261 -39843287 - MIR SINE MIR -10 252 16 197 254 84 14 chr18 46834278 46834349 -39843199 - MIR3 SINE MIR -122 86 11 441 194 59 132 chr18 46834415 46834688 -39842860 - MER112 DNA MER1_type -3 253 1 1456 165 23 35 chr18 46835645 46835906 -39841642 + AluJo SINE Alu 37 294 -18 334 129 43 0 chr18 46835925 46835995 -39841553 + GA-rich Low_complexity Low_complexity 3 75 0 22 35 0 0 chr18 46836452 46836481 -39841067 + AT_rich Low_complexity Low_complexity 1 29 0 462 253 163 99 chr18 46836845 46837159 -39840389 - L3 LINE CR1 -8 1569 1218 1594 129 173 0 chr18 46837159 46837414 -39840134 - AluSc SINE Alu 0 299 1 462 253 163 99 chr18 46837414 46837541 -39840007 - L3 LINE CR1 -359 1218 1100 185 333 0 0 chr18 46837547 46837601 -39839947 - L3 LINE CR1 -1018 559 506 197 287 24 144 chr18 46838988 46839155 -39838393 - MER5B DNA MER1_type -7 171 25 799 233 41 6 chr18 46840205 46840377 -39837171 + MER45A DNA AcHobo 1 178 0 23 78 0 0 chr18 46840469 46840520 -39837028 + AT_rich Low_complexity Low_complexity 1 51 0 953 213 6 0 chr18 46840553 46840727 -39836821 - MER58A DNA MER1_type -6 218 44 884 201 62 6 chr18 46840796 46840975 -39836573 + MER5A DNA MER1_type 1 189 0 683 142 110 65 chr18 46841162 46841273 -39836275 - MER105 DNA DNA -42 162 41 823 167 125 0 chr18 46841273 46841441 -39836107 + MER5A DNA MER1_type 1 189 0 683 142 110 65 chr18 46841441 46841484 -39836064 - MER105 DNA DNA -163 41 1 237 317 40 20 chr18 46841508 46841609 -39835939 - MIR SINE MIR -153 109 7 962 166 126 0 chr18 46842672 46842847 -39834701 - MER3 DNA MER1_type -12 197 1 261 57 0 0 chr18 46842879 46842914 -39834634 + (TC)n Simple_repeat Simple_repeat 2 36 0 233 252 218 34 chr18 46843607 46843813 -39833735 - L1MC4 LINE L1 -40 8002 7759 258 301 7 73 chr18 46845163 46845299 -39832249 + L3 LINE CR1 786 912 -665 667 261 122 37 chr18 46845381 46845676 -39831872 - MLT1J2 LTR MaLR -128 322 3 277 326 176 14 chr18 46845677 46846024 -39831524 + L3 LINE CR1 912 1314 -263 267 287 30 40 chr18 46846053 46846154 -39831394 + L2 LINE L2 3169 3268 -4 4477 193 44 50 chr18 46847499 46848706 -39828842 - L1MB7 LINE L1 0 6184 4992 2158 111 27 0 chr18 46848706 46849004 -39828544 - AluSg SINE Alu -4 306 1 4477 193 44 50 chr18 46849004 46849379 -39828169 - L1MB7 LINE L1 -1192 4992 4616 351 230 11 35 chr18 46850336 46850423 -39827125 - MIR SINE MIR -94 168 84 529 127 0 0 chr18 46851953 46852032 -39825516 + MADE1 DNA Mariner 1 79 -1 180 290 142 71 chr18 46852033 46852202 -39825346 - MIR3 SINE MIR -25 183 3 199 306 73 65 chr18 46852433 46852557 -39824991 - L2 LINE L2 -7 3265 3141 216 67 0 0 chr18 46852582 46852612 -39824936 + (CA)n Simple_repeat Simple_repeat 1 30 0 208 135 0 0 chr18 46853129 46853166 -39824382 + (T)n Simple_repeat Simple_repeat 1 37 0 1544 79 0 0 chr18 46853180 46853369 -39824179 - AluY SINE Alu -122 189 1 410 296 48 44 chr18 46853836 46854042 -39823506 - MLT1J LTR MaLR -3 508 302 238 256 8 19 chr18 46855337 46855471 -39822077 - MIR3 SINE MIR -7 201 23 184 261 43 0 chr18 46856388 46856434 -39821114 + MIR SINE MIR 68 115 -93 325 281 74 41 chr18 46856447 46856568 -39820980 - MIR SINE MIR -91 171 47 1987 145 0 0 chr18 46856596 46856885 -39820663 + AluSx SINE Alu 1 289 -23 209 108 0 27 chr18 46857085 46857122 -39820426 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 284 336 34 60 chr18 46857368 46857517 -39820031 + MIR SINE MIR 38 182 -80 505 324 17 22 chr18 46859131 46859310 -39818238 + L3 LINE CR1 1383 1560 -17 435 325 8 16 chr18 46859709 46859835 -39817713 + L2 LINE L2 3143 3267 -5 197 257 70 99 chr18 46859915 46860000 -39817548 + L2 LINE L2 2999 3078 -235 2245 97 0 23 chr18 46860000 46860300 -39817248 - AluSc SINE Alu -16 293 1 197 257 70 99 chr18 46860300 46860385 -39817163 + L2 LINE L2 3078 3164 -149 278 244 12 0 chr18 46860389 46860471 -39817077 + (TA)n Simple_repeat Simple_repeat 1 83 0 335 173 67 0 chr18 46860571 46860646 -39816902 + L2 LINE L2 3160 3239 -74 711 245 80 88 chr18 46860649 46861012 -39816536 - MLT1A1 LTR MaLR 0 365 6 235 259 0 0 chr18 46861033 46861087 -39816461 + L2 LINE L2 3255 3308 -5 253 309 203 16 chr18 46861625 46861748 -39815800 + MIR3 SINE MIR 25 170 -38 238 248 9 86 chr18 46862899 46863004 -39814544 - MIR SINE MIR -107 155 59 279 324 81 0 chr18 46863760 46863871 -39813677 - MIR3 SINE MIR -2 206 87 188 301 54 8 chr18 46864019 46864126 -39813422 - MIR SINE MIR -65 143 40 21 0 0 0 chr18 46865183 46865204 -39812344 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr18 46865677 46865705 -39811843 + (T)n Simple_repeat Simple_repeat 1 28 0 243 0 0 0 chr18 46866655 46866682 -39810866 + (T)n Simple_repeat Simple_repeat 1 27 0 265 271 29 0 chr18 46867493 46867563 -39809985 - MIR SINE MIR -62 146 75 795 224 6 6 chr18 46867713 46867878 -39809670 - FRAM SINE Alu -1 165 1 234 0 0 0 chr18 46868392 46868418 -39809130 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 189 0 0 0 chr18 46868418 46868439 -39809109 + (CAA)n Simple_repeat Simple_repeat 1 21 0 235 369 78 0 chr18 46868680 46868783 -39808765 + MIR SINE MIR 36 146 -62 41747 67 5 3 chr18 46869594 46875720 -39801828 - L1PA5 LINE L1 -13 6141 4 460 242 114 20 chr18 46875746 46875789 -39801759 - MIR SINE MIR -70 192 154 2318 119 0 0 chr18 46875789 46876099 -39801449 - AluSx SINE Alu -2 310 1 460 242 114 20 chr18 46876099 46876204 -39801344 - MIR SINE MIR -108 154 30 775 260 13 21 chr18 46876250 46876485 -39801063 - MIR SINE MIR -21 241 9 204 303 18 28 chr18 46877277 46877386 -39800162 + MER5A DNA MER1_type 54 161 -28 281 262 37 19 chr18 46878714 46878821 -39798727 - MIR SINE MIR -3 259 151 2855 3 0 10 chr18 46878821 46879128 -39798420 + AluYa5 SINE Alu 1 304 -7 276 284 239 0 chr18 46879349 46879458 -39798090 + MER5A DNA MER1_type 40 174 -15 390 108 0 0 chr18 46880603 46880668 -39796880 + (TG)n Simple_repeat Simple_repeat 1 65 0 2589 231 67 42 chr18 46880720 46881498 -39796050 - L1ME2 LINE L1 -2 6231 5435 3497 281 88 39 chr18 46881559 46882731 -39794817 - L1ME2 LINE L1 -3513 2702 1588 1908 116 10 27 chr18 46882731 46883025 -39794523 - AluSx SINE Alu -7 305 17 3497 281 88 39 chr18 46883025 46884448 -39793100 - L1ME2 LINE L1 -4627 1588 4 647 247 17 17 chr18 46885137 46885311 -39792237 - MER5B DNA MER1_type 0 178 5 2066 155 3 0 chr18 46885477 46885787 -39791761 - AluSx SINE Alu -1 311 1 507 276 22 17 chr18 46886067 46886248 -39791300 - MER5A DNA MER1_type -1 188 7 1208 59 0 29 chr18 46886650 46886820 -39790728 - L1PA5 LINE L1 -1 6153 5989 1124 62 27 0 chr18 46886820 46886985 -39790563 + L1P LINE L1 5179 5347 -799 343 326 101 7 chr18 46888338 46888476 -39789072 - L2 LINE L2 0 3272 3122 280 204 0 0 chr18 46888662 46888716 -39788832 - L2 LINE L2 -1 3312 3259 198 0 0 0 chr18 46889147 46889169 -39788379 + (T)n Simple_repeat Simple_repeat 1 22 0 2179 97 7 27 chr18 46889291 46889589 -39787959 - AluSp SINE Alu -21 292 1 379 0 39 0 chr18 46890276 46890327 -39787221 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 196 333 206 0 chr18 46891210 46891312 -39786236 + MIR SINE MIR 20 142 -66 180 77 0 0 chr18 46891621 46891647 -39785901 + (TC)n Simple_repeat Simple_repeat 1 26 0 216 0 0 0 chr18 46896166 46896190 -39781358 + (A)n Simple_repeat Simple_repeat 1 24 0 396 307 29 0 chr18 46897188 46897325 -39780223 + MIR3 SINE MIR 19 159 -49 310 256 35 0 chr18 46897394 46897480 -39780068 - MIR SINE MIR -88 174 86 205 197 105 26 chr18 46897549 46897625 -39779923 - MIR3 SINE MIR -124 84 3 194 307 219 7 chr18 46899831 46899968 -39777580 + MIR3 SINE MIR 37 202 -6 336 319 26 0 chr18 46900347 46900463 -39777085 - MIR3 SINE MIR -36 172 54 1735 148 60 0 chr18 46901748 46902032 -39775516 - AluSx SINE Alu -11 301 1 1447 166 73 40 chr18 46902178 46902479 -39775069 - AluJo SINE Alu -1 311 1 2010 140 0 35 chr18 46905443 46905757 -39771791 + AluJo SINE Alu 1 303 -9 319 312 64 56 chr18 46907292 46907526 -39770022 + MIR SINE MIR 21 256 -6 959 262 58 8 chr18 46907975 46908290 -39769258 - MLT1E2 LTR MaLR 0 626 261 210 244 73 67 chr18 46908815 46908979 -39768569 - L2 LINE L2 -61 3252 3088 288 295 55 38 chr18 46910794 46910977 -39766571 + MIR SINE MIR 77 262 0 2218 106 3 0 chr18 46911104 46911396 -39766152 - AluSq SINE Alu -20 293 1 14687 37 1 4 chr18 46911414 46913948 -39763600 - L1PA4 LINE L1 0 6155 3629 743 246 86 51 chr18 46914476 46914789 -39762759 - MER5C DNA MER1_type 0 324 1 279 339 62 16 chr18 46914789 46915029 -39762519 - L2 LINE L2 -609 2705 2455 301 282 107 15 chr18 46916384 46916515 -39761033 - MIR3 SINE MIR -50 158 16 387 0 0 0 chr18 46916619 46916662 -39760886 + (CA)n Simple_repeat Simple_repeat 2 44 0 754 279 46 12 chr18 46917174 46917414 -39760134 + MIR SINE MIR 5 252 -10 334 272 52 22 chr18 46917467 46917603 -39759945 + MIR SINE MIR 111 250 -12 465 292 22 12 chr18 46919426 46919594 -39757954 - MIR SINE MIR -38 170 4 231 313 70 16 chr18 46920520 46920648 -39756900 - L2 LINE L2 -8 3305 3171 280 196 20 0 chr18 46920966 46921017 -39756531 - L3 LINE CR1 -1 1576 1525 504 249 24 115 chr18 46921394 46921543 -39756005 + MIR3 SINE MIR 16 142 -66 801 199 111 23 chr18 46921543 46921714 -39755834 + MER5A DNA MER1_type 1 186 -3 504 249 24 115 chr18 46921714 46921773 -39755775 + MIR3 SINE MIR 142 205 -3 213 254 17 17 chr18 46923467 46923526 -39754022 - MIR SINE MIR -63 145 87 716 310 53 4 chr18 46923879 46924124 -39753424 - MIR SINE MIR 0 262 6 2096 107 31 0 chr18 46924492 46924783 -39752765 + AluSg SINE Alu 1 300 -10 2090 120 28 87 chr18 46924791 46925149 -39752399 - MER1B DNA MER1_type 0 337 1 244 283 19 57 chr18 46925210 46925316 -39752232 + MIR SINE MIR 160 261 -1 2136 93 0 0 chr18 46925429 46925697 -39751851 + AluSx SINE Alu 1 268 -44 5449 153 107 17 chr18 46926651 46926919 -39750629 - Tigger3b DNA MER2_type -1863 1165 922 197 33 33 0 chr18 46926919 46926949 -39750599 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 5449 153 107 17 chr18 46926949 46927462 -39750086 - Tigger3b DNA MER2_type -2106 922 260 458 57 14 0 chr18 46927462 46927532 -39750016 + (TATAG)n Simple_repeat Simple_repeat 4 74 0 5449 153 107 17 chr18 46927532 46927818 -39749730 - Tigger3b DNA MER2_type -2768 260 1 613 210 136 6 chr18 46928013 46928189 -39749359 - MARNA DNA Mariner -136 450 252 1010 279 65 73 chr18 46929383 46930187 -39747361 + L1ME3A LINE L1 460 1256 -4863 2281 30 0 11 chr18 46930203 46930472 -39747076 + AluYa5 SINE Alu 46 311 0 22 35 0 0 chr18 46930491 46930520 -39747028 + AT_rich Low_complexity Low_complexity 1 29 0 2607 68 0 0 chr18 46930659 46930970 -39746578 - AluY SINE Alu 0 311 1 405 0 0 0 chr18 46931059 46931104 -39746444 + (TG)n Simple_repeat Simple_repeat 2 46 0 1080 232 86 45 chr18 46931158 46931494 -39746054 - MSTD LTR MaLR -46 350 1 200 219 24 0 chr18 46931652 46931693 -39745855 + CT-rich Low_complexity Low_complexity 1 42 0 229 215 48 46 chr18 46932185 46932267 -39745281 - MIR SINE MIR -29 179 96 302 0 26 0 chr18 46936317 46936355 -39741193 + (CA)n Simple_repeat Simple_repeat 1 39 0 338 61 20 0 chr18 46936557 46936606 -39740942 + (TTCA)n Simple_repeat Simple_repeat 2 51 0 697 288 48 13 chr18 46936686 46936915 -39740633 + MIR SINE MIR 23 259 -3 337 382 42 0 chr18 46936947 46937112 -39740436 + L3 LINE CR1 1330 1501 -76 186 292 174 28 chr18 46937167 46937311 -39740237 - MIR SINE MIR -32 230 66 320 272 40 24 chr18 46938588 46938713 -39738835 - MARNA DNA Mariner -117 469 343 231 235 59 0 chr18 46938865 46938916 -39738632 + MARNA DNA Mariner 435 488 -98 905 211 36 54 chr18 46939431 46939654 -39737894 + MER20 DNA MER1_type 1 219 0 180 0 0 0 chr18 46941172 46941192 -39736356 + (T)n Simple_repeat Simple_repeat 1 20 0 198 143 0 0 chr18 46941308 46941343 -39736205 + (A)n Simple_repeat Simple_repeat 1 35 0 1852 281 90 73 chr18 46941444 46942407 -39735141 + L1ME3A LINE L1 2204 3149 -2980 280 61 0 0 chr18 46942407 46942440 -39735108 + U2 snRNA snRNA 1 33 -155 1852 281 90 73 chr18 46942440 46943932 -39733616 + L1ME3A LINE L1 3149 4734 -1395 345 287 95 46 chr18 46943904 46944294 -39733254 + L1ME3A LINE L1 4943 5351 -778 * 790 317 68 31 chr18 46944379 46944837 -39732711 + L1ME3A LINE L1 5393 5867 -286 455 313 90 42 chr18 46944932 46945098 -39732450 + MER91A DNA MER1_type 1 174 -22 207 0 0 0 chr18 46945198 46945221 -39732327 + (T)n Simple_repeat Simple_repeat 1 23 0 516 134 134 31 chr18 46946219 46946316 -39731232 - AluJb SINE Alu -203 109 3 198 0 0 0 chr18 46946667 46946689 -39730859 + (T)n Simple_repeat Simple_repeat 1 22 0 23 0 0 0 chr18 46946843 46946866 -39730682 + GC_rich Low_complexity Low_complexity 1 23 0 2327 105 0 3 chr18 46946866 46947171 -39730377 - AluSc SINE Alu -5 304 1 2400 179 49 5 chr18 46947292 46947739 -39729809 - MLT1C LTR MaLR 0 467 1 303 341 14 14 chr18 46949456 46949594 -39727954 + MIR SINE MIR 20 157 -105 253 350 79 7 chr18 46950649 46950789 -39726759 - MIR3 SINE MIR -55 153 4 514 235 40 105 chr18 46951604 46951804 -39725744 - MIR SINE MIR 0 262 76 252 275 87 0 chr18 46952659 46952728 -39724820 + MIR SINE MIR 24 98 -164 2170 235 20 19 chr18 46953028 46953565 -39723983 - MER74A LTR ERVL -13 545 8 1455 186 40 4 chr18 46953571 46953901 -39723647 + L1PB4 LINE L1 5781 6147 -7 240 35 0 0 chr18 46954332 46954361 -39723187 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 2220 116 0 0 chr18 46954364 46954657 -39722891 - AluSg SINE Alu -17 293 1 665 241 59 37 chr18 46955563 46955750 -39721798 + MIR SINE MIR 1 191 -71 35 0 0 0 chr18 46955750 46955785 -39721763 + AT_rich Low_complexity Low_complexity 1 35 0 238 200 123 0 chr18 46956836 46956901 -39720647 - MIR SINE MIR -73 189 117 324 0 0 0 chr18 46957651 46957687 -39719861 + (CA)n Simple_repeat Simple_repeat 1 36 0 264 271 118 0 chr18 46958921 46959006 -39718542 + MIR3 SINE MIR 108 202 -6 320 281 33 25 chr18 46959512 46959633 -39717915 - MIR SINE MIR -24 238 117 828 123 43 0 chr18 46960247 46960385 -39717163 - L1MA8 LINE L1 -1 6290 6147 350 254 130 30 chr18 46960843 46961012 -39716536 + MIR SINE MIR 20 205 -57 899 94 0 0 chr18 46961091 46961208 -39716340 + AluSc SINE Alu 193 309 0 324 0 0 0 chr18 46961374 46961410 -39716138 + (A)n Simple_repeat Simple_repeat 1 36 0 191 241 204 28 chr18 46961736 46961844 -39715704 - MIR SINE MIR -130 132 6 237 364 18 0 chr18 46963402 46963512 -39714036 + L2 LINE L2 2872 2983 -289 2210 113 0 0 chr18 46963662 46963971 -39713577 + AluSx SINE Alu 1 309 -3 599 303 22 6 chr18 46964034 46964212 -39713336 - MIR SINE MIR -80 182 2 22 0 0 0 chr18 46964457 46964479 -39713069 + AT_rich Low_complexity Low_complexity 1 22 0 877 253 21 9 chr18 46964893 46965126 -39712422 - MIR SINE MIR -19 243 8 210 231 214 43 chr18 46967487 46967604 -39709944 + MIR3 SINE MIR 66 202 -6 241 286 0 0 chr18 46967910 46967959 -39709589 + (CGTG)n Simple_repeat Simple_repeat 1 49 0 229 311 101 17 chr18 46968445 46968564 -39708984 - MIR SINE MIR -127 135 7 1282 182 52 15 chr18 46968836 46969105 -39708443 - MLT1D LTR MaLR 0 505 227 221 56 0 28 chr18 46969113 46969149 -39708399 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 20115 29 2 0 chr18 46969149 46972252 -39705296 - L1PA3 LINE L1 -24 6131 3024 490 243 45 93 chr18 46972252 46972499 -39705049 - MLT1D LTR MaLR -270 235 1 390 211 329 7 chr18 46972499 46972651 -39704897 - MIR SINE MIR -59 203 3 193 286 103 71 chr18 46972778 46972904 -39704644 - L2 LINE L2 -16 3297 3168 586 299 42 6 chr18 46973692 46973859 -39703689 + MER91A DNA MER1_type 2 174 -22 325 327 89 20 chr18 46973859 46973960 -39703588 + MER91A DNA MER1_type 89 196 0 24 0 0 0 chr18 46974094 46974118 -39703430 + AT_rich Low_complexity Low_complexity 1 24 0 375 330 33 22 chr18 46974376 46974607 -39702941 + MIR SINE MIR 19 246 -16 202 260 14 41 chr18 46974781 46974854 -39702694 - L2 LINE L2 -9 3304 3234 349 320 87 22 chr18 46974900 46975066 -39702482 + MIR3 SINE MIR 6 178 -67 22 0 0 0 chr18 46975641 46975663 -39701885 + AT_rich Low_complexity Low_complexity 1 22 0 2274 101 0 7 chr18 46977164 46977462 -39700086 + AluSc SINE Alu 1 296 -13 287 266 70 114 chr18 46977998 46978156 -39699392 + MIR SINE MIR 32 182 -80 768 297 26 9 chr18 46978549 46978778 -39698770 - MIR SINE MIR -11 251 19 239 289 294 5 chr18 46980040 46980241 -39697307 - MIR SINE MIR -2 260 2 325 308 168 0 chr18 46982148 46982255 -39695293 - MIR SINE MIR -55 153 29 2192 108 16 13 chr18 46982792 46983097 -39694451 + AluSx SINE Alu 1 306 -6 282 276 0 0 chr18 46983110 46983168 -39694380 + L2 LINE L2 3210 3267 -5 2298 101 0 0 chr18 46983259 46983546 -39694002 - AluSx SINE Alu -9 303 17 285 89 0 0 chr18 46984478 46984523 -39693025 + (CA)n Simple_repeat Simple_repeat 1 45 0 387 260 109 31 chr18 46985868 46986060 -39691488 - LTR37B LTR ERV1 -65 403 197 975 81 16 0 chr18 46986114 46986237 -39691311 + AluSq/x SINE Alu 1 125 -187 1900 112 7 32 chr18 46986255 46986540 -39691008 + AluSg SINE Alu 1 278 -32 568 299 108 5 chr18 46986733 46986947 -39690601 + MIR SINE MIR 15 250 -12 237 291 80 105 chr18 46986982 46987333 -39690215 + L2 LINE L2 2915 3256 -16 283 174 31 61 chr18 46988883 46988981 -39688567 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 212 199 54 34 chr18 46989127 46989185 -39688363 - MIR SINE MIR -55 153 94 202 277 19 106 chr18 46989317 46989443 -39688105 + MIR SINE MIR 89 210 -52 2484 47 23 0 chr18 46989803 46990104 -39687444 + AluYb8 SINE Alu 1 308 -10 5571 226 62 25 chr18 46990105 46991793 -39685755 + L1ME LINE L1 3697 5321 -845 2054 127 3 0 chr18 46991793 46992111 -39685437 + AluY SINE Alu 1 319 0 198 0 0 0 chr18 46992111 46992133 -39685415 + (CA)n Simple_repeat Simple_repeat 1 22 0 5571 226 62 25 chr18 46992133 46992413 -39685135 + L1ME LINE L1 5320 5738 -428 335 236 34 0 chr18 46992414 46992503 -39685045 + L1MA10 LINE L1 6241 6332 -2 417 287 128 11 chr18 46992744 46992932 -39684616 - L3 LINE CR1 -236 1341 1132 195 215 62 15 chr18 46993516 46993581 -39683967 - L2 LINE L2 -64 3249 3182 463 224 100 57 chr18 46993825 46994035 -39683513 + MIR SINE MIR 28 246 -16 245 276 64 70 chr18 46994205 46994361 -39683187 + MER5A DNA MER1_type 13 167 -22 432 288 106 12 chr18 46995003 46995163 -39682385 - MIR SINE MIR -15 247 73 470 329 62 17 chr18 46995322 46995562 -39681986 - MIR SINE MIR -9 253 3 200 245 20 0 chr18 46995728 46995777 -39681771 + L2 LINE L2 3215 3264 -8 23 0 0 0 chr18 46996963 46996986 -39680562 + AT_rich Low_complexity Low_complexity 1 23 0 1059 318 17 14 chr18 46997850 46998212 -39679336 - L1MCb LINE L1 -5679 366 4 3436 234 70 15 chr18 46998222 46999274 -39678274 - L1M4 LINE L1 -1068 5078 3969 396 285 90 55 chr18 46999788 47000044 -39677504 + MLT1L LTR MaLR 342 606 -9 884 138 7 21 chr18 47000694 47000839 -39676709 + FLAM_C SINE Alu 1 143 0 1282 85 0 0 chr18 47000939 47001092 -39676456 - AluSx SINE Alu -143 169 17 285 89 0 0 chr18 47002025 47002070 -39675478 + (CA)n Simple_repeat Simple_repeat 1 45 0 387 260 109 31 chr18 47003415 47003607 -39673941 - LTR37B LTR ERV1 -65 403 197 975 81 16 0 chr18 47003661 47003784 -39673764 + AluSq/x SINE Alu 1 125 -188 1900 112 7 32 chr18 47003802 47004087 -39673461 + AluSg SINE Alu 1 278 -32 568 299 108 5 chr18 47004280 47004494 -39673054 + MIR SINE MIR 15 250 -12 237 291 80 105 chr18 47004529 47004880 -39672668 + L2 LINE L2 2915 3256 -16 283 174 31 61 chr18 47006430 47006528 -39671020 + (CAGAGA)n Simple_repeat Simple_repeat 2 96 0 212 199 54 34 chr18 47006674 47006732 -39670816 - MIR SINE MIR -55 153 94 202 277 19 106 chr18 47006864 47006990 -39670558 + MIR SINE MIR 89 210 -52 2964 6 0 0 chr18 47007350 47007666 -39669882 + AluYb8 SINE Alu 1 316 -2 370 294 118 11 chr18 47008047 47008282 -39669266 + Charlie8 DNA MER1_type 9 254 -2163 662 117 58 58 chr18 47010133 47010253 -39667295 + L1MC1 LINE L1 6214 6333 0 213 292 42 0 chr18 47010732 47010804 -39666744 + L2 LINE L2 3198 3272 0 739 344 40 46 chr18 47011566 47012069 -39665479 + L3 LINE CR1 735 1234 -343 2320 99 0 0 chr18 47012850 47013144 -39664404 - AluSg SINE Alu -16 294 1 2370 211 148 43 chr18 47014018 47014938 -39662610 - Charlie7 DNA MER1_type -144 2468 1453 464 253 126 69 chr18 47014998 47015259 -39662289 - Charlie7 DNA MER1_type -2336 276 1 271 348 17 9 chr18 47017126 47017241 -39660307 - MIR3 SINE MIR -7 201 86 1534 199 125 41 chr18 47017745 47018282 -39659266 - L1MC5 LINE L1 -49 7912 7331 1072 152 71 15 chr18 47018283 47018480 -39659068 - MER3 DNA MER1_type 0 209 2 598 276 127 30 chr18 47018659 47019088 -39658460 - L1MB7 LINE L1 -303 5818 5465 225 325 61 35 chr18 47019938 47020052 -39657496 - L2 LINE L2 -6 3266 3150 233 213 0 0 chr18 47020656 47020703 -39656845 + (TG)n Simple_repeat Simple_repeat 1 47 0 322 311 142 26 chr18 47021383 47021573 -39655975 + MIR SINE MIR 51 262 0 315 154 0 0 chr18 47022124 47022189 -39655359 + C-rich Low_complexity Low_complexity 5 69 0 25 51 0 0 chr18 47026610 47026649 -39650899 + AT_rich Low_complexity Low_complexity 1 39 0 328 291 80 34 chr18 47029330 47029505 -39648043 + MIR3 SINE MIR 24 206 -2 279 157 0 0 chr18 47029635 47029686 -39647862 + CT-rich Low_complexity Low_complexity 1 51 0 197 349 15 0 chr18 47029798 47029864 -39647684 + L2 LINE L2 2981 3047 -225 569 287 76 6 chr18 47029959 47030116 -39647432 + MER91A DNA MER1_type 1 168 -28 1297 229 55 80 chr18 47030507 47030984 -39646564 - L1MD2 LINE L1 -1 6358 5894 * 2951 213 49 58 chr18 47030980 47031550 -39645998 - L1MC3 LINE L1 -1 7990 7416 1565 198 0 38 chr18 47031550 47031869 -39645679 - AluJo SINE Alu -5 307 1 2951 213 49 58 chr18 47031869 47031887 -39645661 - L1MC3 LINE L1 -575 7416 7399 282 274 0 0 chr18 47031887 47031960 -39645588 - MLT1F1 LTR MaLR -450 117 45 2951 213 49 58 chr18 47031960 47032244 -39645304 - L1MC3 LINE L1 -592 7399 7114 1888 88 35 21 chr18 47032244 47032529 -39645019 - L1MB2 LINE L1 -5 6166 5878 2951 213 49 58 chr18 47032529 47033216 -39644332 - L1MC3 LINE L1 -877 7114 6372 2560 228 14 43 chr18 47033220 47033656 -39643892 - L1MD2 LINE L1 -474 5885 5475 1888 197 39 14 chr18 47033656 47034012 -39643536 - MLT1A1 LTR MaLR 0 365 1 2560 228 14 43 chr18 47034012 47034289 -39643259 - L1MD2 LINE L1 -884 5475 5192 204 254 32 32 chr18 47034366 47034429 -39643119 - MIR SINE MIR -97 111 49 374 271 45 73 chr18 47034548 47034725 -39642823 - MIR3 SINE MIR -28 180 9 245 274 60 65 chr18 47035446 47035614 -39641934 - L1ME3A LINE L1 -39 6131 5965 2099 223 55 88 chr18 47035700 47036574 -39640974 - L1MC5 LINE L1 -431 7530 6686 543 37 37 0 chr18 47036575 47036657 -39640891 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 835 293 98 10 chr18 47037053 47037449 -39640099 - HAL1b LINE L1 -613 735 305 3319 170 17 0 chr18 47037778 47038320 -39639228 + Tigger2 DNA MER2_type 1 551 -2167 1987 139 40 3 chr18 47038317 47038640 -39638908 + Tigger2 DNA MER2_type 2384 2718 0 * 202 234 0 0 chr18 47038799 47038846 -39638702 + T-rich Low_complexity Low_complexity 1 47 0 8216 4 0 0 chr18 47038848 47039748 -39637800 - L1HS LINE L1 -2 6153 5254 1548 264 44 5 chr18 47040305 47040714 -39636834 + MER70B LTR ERVL 6 430 -148 2017 120 13 23 chr18 47040829 47041130 -39636418 + AluSx SINE Alu 4 301 -11 1723 204 33 9 chr18 47041823 47042152 -39635396 + MER58B DNA MER1_type 1 337 -4 306 247 144 0 chr18 47043875 47043972 -39633576 + MIR SINE MIR 82 192 -70 384 298 57 44 chr18 47044132 47044290 -39633258 + L3 LINE CR1 1151 1310 -267 280 283 75 38 chr18 47044512 47044618 -39632930 - L2 LINE L2 0 3313 3204 180 0 0 0 chr18 47044768 47044788 -39632760 + (T)n Simple_repeat Simple_repeat 1 20 0 331 223 89 18 chr18 47045473 47045585 -39631963 + Charlie7 DNA MER1_type 33 152 -2460 342 281 65 72 chr18 47045685 47046114 -39631434 + Charlie7 DNA MER1_type 329 721 -1891 238 261 54 0 chr18 47046426 47046518 -39631030 + Charlie7 DNA MER1_type 765 861 -1751 280 261 0 45 chr18 47046532 47046643 -39630905 + Charlie7 DNA MER1_type 2507 2612 0 1423 176 39 52 chr18 47046757 47046813 -39630735 + MER89 LTR ERV1 3 58 -501 2187 121 0 9 chr18 47046813 47047128 -39630420 + AluSx SINE Alu 1 312 0 1423 176 39 52 chr18 47047128 47047401 -39630147 + MER89 LTR ERV1 58 328 -231 377 237 0 8 chr18 47047451 47047569 -39629979 + CT-rich Low_complexity Low_complexity 4 120 0 273 357 54 0 chr18 47048829 47048941 -39628607 + MIR SINE MIR 39 156 -52 230 241 0 0 chr18 47050114 47050172 -39627376 + (TAG)n Simple_repeat Simple_repeat 1 58 0 209 250 39 0 chr18 47050422 47050474 -39627074 + GA-rich Low_complexity Low_complexity 3 56 0 255 312 28 18 chr18 47051204 47051313 -39626235 - MIR SINE MIR -105 157 48 252 343 90 18 chr18 47051655 47051821 -39625727 + MIR SINE MIR 15 192 -70 3271 114 7 2 chr18 47052053 47052507 -39625041 + L1PA13 LINE L1 5697 6152 -11 2171 98 3 26 chr18 47052673 47052978 -39624570 + AluSq SINE Alu 1 298 -15 2251 233 84 34 chr18 47053056 47053652 -39623896 - MLT1E2 LTR MaLR 0 626 1 200 321 138 24 chr18 47053713 47054053 -39623495 + L2 LINE L2 1540 1918 -1396 1873 142 48 3 chr18 47054059 47054368 -39623180 + THE1C LTR MaLR 53 375 0 2104 117 3 13 chr18 47054509 47054808 -39622740 - AluSc SINE Alu -13 296 1 2323 97 0 7 chr18 47054817 47055116 -39622432 - AluSq SINE Alu -16 297 1 466 271 85 37 chr18 47055131 47055319 -39622229 - MIR SINE MIR -65 197 1 290 351 15 22 chr18 47055345 47055479 -39622069 + L2 LINE L2 2614 2746 -568 184 299 134 22 chr18 47055871 47056005 -39621543 + L2 LINE L2 3165 3313 0 692 266 49 5 chr18 47057499 47057683 -39619865 - MIR SINE MIR -4 258 67 38 0 0 0 chr18 47058154 47058192 -39619356 + AT_rich Low_complexity Low_complexity 1 38 0 2197 117 0 3 chr18 47058302 47058601 -39618947 + AluSg SINE Alu 1 298 -12 21 57 0 0 chr18 47059092 47059127 -39618421 + AT_rich Low_complexity Low_complexity 1 35 0 205 113 0 113 chr18 47060868 47060921 -39616627 + MER5C DNA MER1_type 78 124 -200 209 159 0 68 chr18 47061081 47061125 -39616423 + MER5C DNA MER1_type 283 323 -1 183 42 0 0 chr18 47061216 47061240 -39616308 + (CA)n Simple_repeat Simple_repeat 2 25 0 1819 184 101 53 chr18 47061831 47062298 -39615250 - LTR2B LTR ERV1 0 490 2 183 301 72 62 chr18 47062370 47062563 -39614985 + MIR SINE MIR 59 253 -9 211 294 167 0 chr18 47063785 47063887 -39613661 - L2 LINE L2 0 3272 3154 999 150 50 50 chr18 47065111 47065311 -39612237 + MER3 DNA MER1_type 1 200 -9 718 340 24 39 chr18 47065371 47065921 -39611627 + L2 LINE L2 2614 3149 -164 212 103 51 0 chr18 47065921 47065960 -39611588 + (CATAT)n Simple_repeat Simple_repeat 1 41 0 212 189 38 0 chr18 47065963 47066016 -39611532 + (TCCA)n Simple_repeat Simple_repeat 3 57 0 428 317 49 6 chr18 47066083 47066247 -39611301 + L2 LINE L2 3133 3303 -10 1619 261 98 20 chr18 47066355 47066915 -39610633 + L2 LINE L2 2339 2942 -372 630 250 42 62 chr18 47066939 47067179 -39610369 + L2 LINE L2 3079 3313 0 570 110 0 0 chr18 47067639 47067721 -39609827 + AluY SINE Alu 1 82 -228 410 240 173 13 chr18 47068843 47068993 -39608555 - MIR SINE MIR -26 236 63 285 259 194 7 chr18 47069005 47069144 -39608404 - LTR33 LTR ERVL -27 494 330 591 260 77 39 chr18 47069220 47069428 -39608120 - LTR33 LTR ERVL -305 216 1 221 208 0 0 chr18 47070879 47070927 -39606621 + L2 LINE L2 3263 3310 -3 537 292 92 31 chr18 47071417 47072122 -39605426 - L1ME LINE L1 -4816 1399 655 25 0 0 0 chr18 47072181 47072206 -39605342 + AT_rich Low_complexity Low_complexity 1 25 0 332 370 44 38 chr18 47072442 47072761 -39604787 - L1ME LINE L1 -6030 366 46 287 335 6 25 chr18 47072793 47072954 -39604594 + (CATATA)n Simple_repeat Simple_repeat 3 160 0 260 290 168 57 chr18 47074203 47074508 -39603040 + L2 LINE L2 2670 3033 -280 28 0 0 0 chr18 47075637 47075665 -39601883 + AT_rich Low_complexity Low_complexity 1 28 0 1375 167 19 12 chr18 47076894 47077151 -39600397 + L1MB4 LINE L1 5901 6159 -21 363 309 139 35 chr18 47077844 47078074 -39599474 + MIR SINE MIR 5 258 -4 1490 203 10 3 chr18 47079387 47079693 -39597855 - AluSq SINE Alu 0 313 6 2217 108 7 3 chr18 47080135 47080465 -39597083 - AluSx SINE Alu 0 336 6 198 191 0 0 chr18 47080980 47081022 -39596526 + GA-rich Low_complexity Low_complexity 1 42 0 529 304 7 0 chr18 47081074 47081209 -39596339 + MIR3 SINE MIR 44 179 -29 411 288 164 14 chr18 47081494 47081713 -39595835 - L2 LINE L2 -1 3312 3061 * 2291 279 43 37 chr18 47081711 47082542 -39595006 - L2 LINE L2 -394 2920 2085 390 57 0 0 chr18 47082779 47082832 -39594716 + (TG)n Simple_repeat Simple_repeat 1 53 0 285 258 0 0 chr18 47083825 47083887 -39593661 + MER94 DNA DNA 1 62 -72 927 147 112 18 chr18 47083887 47084057 -39593491 + AluJb SINE Alu 118 303 -9 302 263 103 53 chr18 47085014 47085257 -39592291 - L1ME4a LINE L1 -17 6104 5850 217 291 23 47 chr18 47085258 47085344 -39592204 - MIR3 SINE MIR -7 201 118 283 333 68 45 chr18 47085534 47085711 -39591837 - MIR SINE MIR -62 200 20 2050 142 50 6 chr18 47085793 47086152 -39591396 + THE1C LTR MaLR 1 375 0 288 269 54 87 chr18 47086194 47086343 -39591205 - MIR SINE MIR 0 262 119 386 331 8 8 chr18 47087125 47087249 -39590299 - MER5B DNA MER1_type 0 178 55 6203 63 13 4 chr18 47087249 47087271 -39590277 - L1PA7 LINE L1 0 6154 6134 321 68 0 0 chr18 47087271 47087315 -39590233 + (CA)n Simple_repeat Simple_repeat 2 45 0 6203 63 13 4 chr18 47087315 47088111 -39589437 - L1PA7 LINE L1 -20 6134 5328 2094 84 31 0 chr18 47088102 47088389 -39589159 + L1P LINE L1 4028 4323 -1823 * 25 31 0 0 chr18 47088589 47088621 -39588927 + AT_rich Low_complexity Low_complexity 1 32 0 437 277 180 5 chr18 47089358 47089564 -39587984 + MER112 DNA MER1_type 8 249 -11 354 45 0 0 chr18 47090748 47090792 -39586756 + (CA)n Simple_repeat Simple_repeat 2 45 0 252 276 0 0 chr18 47090999 47091057 -39586491 - L2 LINE L2 -1 3312 3255 424 306 63 39 chr18 47091846 47092101 -39585447 - L2 LINE L2 -208 3064 2804 4278 206 36 24 chr18 47092372 47093360 -39584188 + L1MD2 LINE L1 5305 6304 -55 196 362 57 38 chr18 47094964 47095069 -39582479 - L2 LINE L2 -20 3252 3146 1214 202 10 68 chr18 47095080 47095372 -39582176 + AluSx SINE Alu 1 275 -37 25 0 0 0 chr18 47095584 47095609 -39581939 + AT_rich Low_complexity Low_complexity 1 25 0 225 309 43 0 chr18 47095792 47095886 -39581662 - MARNA DNA Mariner -248 338 241 320 393 0 17 chr18 47096023 47096196 -39581352 - MIR3 SINE MIR -6 202 33 212 184 0 0 chr18 47096751 47096789 -39580759 + (TAA)n Simple_repeat Simple_repeat 2 39 0 216 0 0 0 chr18 47096891 47096915 -39580633 + (A)n Simple_repeat Simple_repeat 1 24 0 400 195 12 37 chr18 47097631 47097690 -39579858 - AluSc SINE Alu -122 187 129 2273 108 0 0 chr18 47097690 47097985 -39579563 - AluSx SINE Alu -17 295 1 400 195 12 37 chr18 47097985 47098007 -39579541 - AluSc SINE Alu -180 129 108 541 150 86 43 chr18 47098011 47098151 -39579397 + MSTB1 LTR MaLR 287 432 0 293 294 33 71 chr18 47098155 47098339 -39579209 - L1MCc LINE L1 -5370 1053 877 575 208 0 9 chr18 47098339 47098445 -39579103 - FLAM_C SINE Alu -38 105 1 5201 151 36 5 chr18 47098449 47099785 -39577763 - L1MA5A LINE L1 -149 6148 4777 1681 249 116 84 chr18 47099782 47101413 -39576135 - L1MCc LINE L1 -4140 2852 1110 * 1280 199 47 32 chr18 47101462 47101739 -39575809 + MSTB1 LTR MaLR 1 281 -151 508 205 0 0 chr18 47101741 47101824 -39575724 - AluS SINE Alu -230 83 1 524 167 87 29 chr18 47101856 47101994 -39575554 + MSTB1 LTR MaLR 287 432 0 546 335 11 31 chr18 47101998 47102258 -39575290 - L1MCc LINE L1 -5370 1053 799 962 300 62 40 chr18 47102346 47102923 -39574625 - L1MCc LINE L1 -5810 613 24 427 339 67 38 chr18 47102989 47103334 -39574214 - L1MEd LINE L1 -5238 881 527 226 232 36 0 chr18 47103393 47103449 -39574099 + CT-rich Low_complexity Low_complexity 4 61 0 342 0 0 0 chr18 47104525 47104563 -39572985 + (T)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr18 47104952 47104979 -39572569 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr18 47104985 47105006 -39572542 + AT_rich Low_complexity Low_complexity 1 21 0 324 0 0 0 chr18 47105013 47105049 -39572499 + (T)n Simple_repeat Simple_repeat 1 36 0 218 173 0 19 chr18 47105114 47105166 -39572382 + GA-rich Low_complexity Low_complexity 3 53 0 229 274 48 12 chr18 47105765 47105849 -39571699 + MIR SINE MIR 173 259 -3 5820 108 14 8 chr18 47106008 47107499 -39570049 - L1PA15 LINE L1 -5 6160 4661 22 0 0 0 chr18 47107505 47107527 -39570021 + AT_rich Low_complexity Low_complexity 1 22 0 1349 49 60 5 chr18 47107528 47107712 -39569836 - L1PB1 LINE L1 0 6151 5958 702 145 0 0 chr18 47107715 47107832 -39569716 - L1PA15 LINE L1 -1473 4673 4557 2273 101 0 3 chr18 47108415 47108711 -39568837 + AluSg SINE Alu 1 295 -15 1224 202 0 8 chr18 47108903 47109151 -39568397 - L1P LINE L1 -1092 5054 4809 223 274 92 79 chr18 47109297 47109461 -39568087 + MIR SINE MIR 86 251 -11 276 77 0 0 chr18 47110327 47110366 -39567182 + (TA)n Simple_repeat Simple_repeat 1 39 0 190 313 27 62 chr18 47110814 47110926 -39566622 - L2 LINE L2 -49 3223 3116 300 279 90 27 chr18 47110981 47111092 -39566456 + MIR SINE MIR 31 148 -60 361 283 164 46 chr18 47111151 47111303 -39566245 - MER91A DNA MER1_type -25 171 2 372 310 155 0 chr18 47111309 47111483 -39566065 + MIR SINE MIR 58 258 -4 42 20 0 0 chr18 47111988 47112037 -39565511 + AT_rich Low_complexity Low_complexity 1 49 0 2448 95 73 3 chr18 47112070 47112396 -39565152 - L1PB1 LINE L1 -17 6134 5778 371 71 0 18 chr18 47112396 47112452 -39565096 + (TA)n Simple_repeat Simple_repeat 1 55 0 2448 95 73 3 chr18 47112452 47112494 -39565054 - L1PB1 LINE L1 -373 5778 5740 304 225 108 31 chr18 47112500 47112629 -39564919 - HAL1 LINE L1 -1446 1061 923 2401 44 3 17 chr18 47113103 47113388 -39564160 + AluY SINE Alu 1 283 -28 297 0 0 0 chr18 47113388 47113421 -39564127 + (CA)n Simple_repeat Simple_repeat 2 34 0 963 198 42 0 chr18 47113580 47113772 -39563776 - MER3 DNA MER1_type -1 208 9 504 0 0 0 chr18 47113830 47113886 -39563662 + (TG)n Simple_repeat Simple_repeat 1 56 0 1339 189 3 75 chr18 47114101 47114419 -39563129 - MLT1B LTR MaLR -95 295 1 255 340 32 0 chr18 47114662 47114756 -39562792 + MIR SINE MIR 85 181 -81 227 318 136 0 chr18 47116138 47116226 -39561322 + MIR SINE MIR 34 133 -129 504 267 156 15 chr18 47116445 47116652 -39560896 + MIR SINE MIR 20 252 -10 301 287 21 49 chr18 47117400 47117543 -39560005 + MIR SINE MIR 49 187 -75 442 255 50 21 chr18 47117725 47117866 -39559682 - MIR3 SINE MIR -2 206 62 23 0 0 0 chr18 47118144 47118167 -39559381 + AT_rich Low_complexity Low_complexity 1 23 0 189 104 21 42 chr18 47118884 47118932 -39558616 + (TTCTCC)n Simple_repeat Simple_repeat 1 47 0 1348 223 38 64 chr18 47119319 47119821 -39557727 - LTR53 LTR ERVL -10 509 21 209 250 0 19 chr18 47120286 47120338 -39557210 + L2 LINE L2 491 541 -2773 408 345 161 18 chr18 47122345 47122568 -39554980 - MIR SINE MIR 0 262 8 440 313 0 0 chr18 47122573 47122685 -39554863 + MER81 DNA DNA 1 112 -2 1563 189 36 71 chr18 47122738 47123130 -39554418 - MLT1B LTR MaLR -7 383 6 358 324 9 18 chr18 47123262 47123373 -39554175 + MER5B DNA MER1_type 65 174 -4 242 320 70 58 chr18 47124012 47124168 -39553380 + MIR3 SINE MIR 13 170 -38 22 0 0 0 chr18 47124622 47124644 -39552904 + AT_rich Low_complexity Low_complexity 1 22 0 1764 75 8 4 chr18 47124806 47125045 -39552503 - L1PA7 LINE L1 -3 6151 5912 467 314 88 18 chr18 47128243 47128469 -39549079 + MIR SINE MIR 15 256 -6 264 333 24 0 chr18 47128858 47128942 -39548606 + L2 LINE L2 3200 3285 -28 739 179 92 0 chr18 47130998 47131171 -39546377 + MER53 DNA DNA 1 189 0 268 294 0 73 chr18 47132490 47132599 -39544949 - MIR3 SINE MIR -3 205 105 507 270 43 18 chr18 47132996 47133159 -39544389 + L3 LINE CR1 1405 1571 -6 423 296 44 13 chr18 47133710 47133869 -39543679 - MIR3 SINE MIR -4 204 41 2258 227 40 7 chr18 47134725 47135298 -39542250 + L1MC4a LINE L1 5332 5923 -1885 741 300 49 12 chr18 47136070 47136313 -39541235 - MIR SINE MIR -4 258 7 1514 321 140 24 chr18 47136533 47137755 -39539793 + L2 LINE L2 1967 3313 0 357 346 86 16 chr18 47138531 47138774 -39538774 - MIR SINE MIR 0 262 3 358 363 56 26 chr18 47139478 47139748 -39537800 + HAL1b LINE L1 399 676 -672 1705 199 0 10 chr18 47139774 47140086 -39537462 + AluJb SINE Alu 1 309 -3 812 203 68 19 chr18 47140088 47140295 -39537253 + MIR SINE MIR 20 236 -26 303 284 8 75 chr18 47140325 47140459 -39537089 + HAL1b LINE L1 663 787 -561 379 321 77 24 chr18 47141830 47142207 -39535341 + L1M4 LINE L1 2877 3273 -2873 23 33 0 0 chr18 47142569 47142599 -39534949 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr18 47142838 47142859 -39534689 + AT_rich Low_complexity Low_complexity 1 21 0 443 161 21 0 chr18 47143536 47143629 -39533919 + CT-rich Low_complexity Low_complexity 2 96 0 1531 156 15 81 chr18 47143631 47143964 -39533584 - AluJo SINE Alu -1 311 1 313 281 92 56 chr18 47144621 47144870 -39532678 - MLT1L LTR MaLR -16 599 342 2978 230 72 16 chr18 47145384 47146418 -39531130 + L1M4 LINE L1 3969 5060 -1086 927 312 17 14 chr18 47146455 47146808 -39530740 + L1MCb LINE L1 13 366 -5679 23 0 0 0 chr18 47147672 47147695 -39529853 + AT_rich Low_complexity Low_complexity 1 23 0 204 245 20 0 chr18 47148881 47148930 -39528618 - L2 LINE L2 -8 3264 3215 485 329 62 17 chr18 47149096 47149336 -39528212 + MIR SINE MIR 3 253 -9 441 288 106 12 chr18 47149495 47149655 -39527893 + MIR SINE MIR 73 247 -15 255 276 64 70 chr18 47150297 47150453 -39527095 - MER5A DNA MER1_type -22 167 13 470 224 100 57 chr18 47150623 47150833 -39526715 - MIR SINE MIR -16 246 28 191 215 62 15 chr18 47151077 47151142 -39526406 + L2 LINE L2 3182 3249 -64 426 287 128 11 chr18 47151726 47151914 -39525634 + L3 LINE CR1 1132 1341 -236 302 250 0 0 chr18 47152160 47152244 -39525304 - L1MA10 LINE L1 -10 6324 6241 4884 224 62 26 chr18 47152245 47152525 -39525023 - L1ME LINE L1 -428 6018 5749 207 0 0 0 chr18 47152525 47152548 -39525000 + (TG)n Simple_repeat Simple_repeat 2 24 0 2059 127 3 0 chr18 47152549 47152881 -39524667 - AluY SINE Alu 0 333 1 4884 224 62 26 chr18 47152881 47154570 -39522978 - L1ME LINE L1 -697 5749 3975 2224 79 4 0 chr18 47154570 47154847 -39522701 - AluY SINE Alu -7 304 27 2222 112 0 0 chr18 47155325 47155619 -39521929 - AluSg SINE Alu -16 294 1 291 177 0 0 chr18 47155719 47155781 -39521767 + (ATAGG)n Simple_repeat Simple_repeat 4 65 0 2332 159 13 0 chr18 47155798 47156194 -39521354 - MER57A LTR ERV1 -2 401 1 320 250 0 0 chr18 47156271 47156339 -39521209 - MER112 DNA MER1_type -184 76 9 309 245 135 60 chr18 47158451 47158651 -39518897 - L1ME LINE L1 -4013 2413 2199 328 295 168 17 chr18 47158870 47159043 -39518505 - HAL1 LINE L1 -744 1763 1565 303 294 73 30 chr18 47159172 47159475 -39518073 - L1ME LINE L1 -4878 1538 1223 26 0 0 0 chr18 47160040 47160066 -39517482 + AT_rich Low_complexity Low_complexity 1 26 0 3195 167 177 18 chr18 47160682 47161466 -39516082 - L1MC3 LINE L1 0 7785 6839 260 51 0 26 chr18 47161466 47161505 -39516043 + (TG)n Simple_repeat Simple_repeat 1 38 0 3195 167 177 18 chr18 47161505 47161619 -39515929 - L1MC3 LINE L1 -946 6839 6744 205 297 40 27 chr18 47166246 47166320 -39511228 + MIR3 SINE MIR 107 181 -27 339 85 0 0 chr18 47166330 47166377 -39511171 + (CA)n Simple_repeat Simple_repeat 2 48 0 334 244 23 23 chr18 47167204 47167421 -39510127 + GA-rich Low_complexity Low_complexity 1 217 0 446 316 80 8 chr18 47167764 47168001 -39509547 - MIR SINE MIR 0 262 9 2043 79 21 45 chr18 47168981 47169306 -39508242 + AluY SINE Alu 1 318 0 1408 201 58 0 chr18 47170237 47170511 -39507037 + AluJo SINE Alu 1 290 -22 186 268 0 0 chr18 47170533 47170574 -39506974 - MIR SINE MIR -24 238 198 366 332 93 10 chr18 47170580 47170773 -39506775 + MIR SINE MIR 3 211 -51 349 264 18 27 chr18 47171459 47171569 -39505979 + CT-rich Low_complexity Low_complexity 2 110 0 248 250 12 25 chr18 47171594 47171674 -39505874 - MIR SINE MIR -11 251 173 550 239 96 30 chr18 47172251 47172452 -39505096 + MIR SINE MIR 28 240 -22 276 296 46 56 chr18 47174708 47174816 -39502732 - L2 LINE L2 -6 3266 3160 300 91 0 0 chr18 47174841 47174885 -39502663 + (A)n Simple_repeat Simple_repeat 1 44 0 374 125 51 45 chr18 47177121 47177297 -39500251 + (TA)n Simple_repeat Simple_repeat 2 178 0 2261 160 42 0 chr18 47177929 47178329 -39499219 - L1MB3 LINE L1 -1 6182 5766 22 35 0 0 chr18 47179242 47179271 -39498277 + AT_rich Low_complexity Low_complexity 1 29 0 186 283 0 0 chr18 47179971 47180017 -39497531 + L2 LINE L2 3268 3313 0 2243 174 5 63 chr18 47180657 47181071 -39496477 - MLT1B LTR MaLR 0 390 1 269 302 73 39 chr18 47181213 47181392 -39496156 - MLT1K LTR MaLR -239 349 165 223 294 109 25 chr18 47182041 47182160 -39495388 + MIR3 SINE MIR 56 184 -24 552 296 62 11 chr18 47182980 47183156 -39494392 - MIR SINE MIR -28 234 50 556 309 82 10 chr18 47184545 47184752 -39492796 - MIR SINE MIR -30 232 11 8539 43 4 0 chr18 47184821 47185863 -39491685 - L1PA5 LINE L1 -896 5250 4205 7672 46 9 0 chr18 47185863 47186747 -39490801 + L1PA5 LINE L1 5256 6151 -3 629 234 134 17 chr18 47186750 47186989 -39490559 - MLT1J LTR MaLR -15 496 230 1366 211 132 15 chr18 47187270 47187597 -39489951 - MLT1A1 LTR MaLR 0 365 1 279 0 0 0 chr18 47189328 47189359 -39488189 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 205 352 87 25 chr18 47189435 47189631 -39487917 + L2 LINE L2 2718 2925 -389 648 298 96 5 chr18 47189784 47189992 -39487556 + MIR SINE MIR 15 241 -21 1981 206 59 38 chr18 47190123 47190618 -39486930 - MLT1D LTR MaLR 0 505 1 393 200 0 0 chr18 47190999 47191069 -39486479 - MIR SINE MIR -109 153 84 1686 185 3 22 chr18 47191116 47191430 -39486118 - AluJo SINE Alu 0 312 5 2034 165 141 3 chr18 47192027 47192403 -39485145 - MSTA LTR MaLR 0 428 1 549 283 21 26 chr18 47193012 47193203 -39484345 + L3 LINE CR1 1357 1546 -31 188 231 0 0 chr18 47194805 47194844 -39482704 - MIR SINE MIR -67 195 157 3254 143 10 6 chr18 47195206 47195718 -39481830 - L1MA5 LINE L1 0 6300 5787 329 303 0 0 chr18 47195739 47195828 -39481720 + L1MC4 LINE L1 6615 6703 -1339 324 250 0 62 chr18 47195748 47195844 -39481704 - L1MC4 LINE L1 -1339 6703 6614 * 312 137 0 0 chr18 47195849 47195900 -39481648 + (TA)n Simple_repeat Simple_repeat 1 51 0 315 315 0 0 chr18 47195905 47195994 -39481554 + L1MC4 LINE L1 6615 6703 -1339 301 326 0 0 chr18 47195954 47196043 -39481505 - L1MC4 LINE L1 -1339 6703 6615 * 317 276 23 0 chr18 47196025 47196112 -39481436 + L1MC4 LINE L1 6615 6703 -1339 227 281 0 0 chr18 47196143 47196225 -39481323 + L1MC4 LINE L1 6615 6696 -1346 209 200 0 0 chr18 47196225 47196260 -39481288 + (TATG)n Simple_repeat Simple_repeat 4 38 0 307 322 0 0 chr18 47196260 47196350 -39481198 + L1MC4 LINE L1 6614 6703 -1339 316 283 0 22 chr18 47196380 47196472 -39481076 + L1MC4 LINE L1 6614 6703 -1339 248 250 50 0 chr18 47196487 47196567 -39480981 + L1MC4 LINE L1 6615 6698 -1344 * 1152 186 9 0 chr18 47196554 47196769 -39480779 - L1M2 LINE L1 -508 5792 5576 185 267 156 33 chr18 47197310 47197400 -39480148 - MIR3 SINE MIR -96 112 12 295 255 0 88 chr18 47198143 47198245 -39479303 - L2 LINE L2 0 3272 3180 238 217 117 0 chr18 47198382 47198442 -39479106 + L1ME LINE L1 5605 5671 -450 233 174 29 43 chr18 47198576 47198645 -39478903 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 23 0 0 0 chr18 47198769 47198792 -39478756 + AT_rich Low_complexity Low_complexity 1 23 0 238 365 62 14 chr18 47199553 47199698 -39477850 - L2 LINE L2 -173 3099 2948 212 340 21 0 chr18 47199716 47199813 -39477735 - MIR SINE MIR 0 262 164 1799 128 22 50 chr18 47199813 47200017 -39477531 - L1MA5 LINE L1 -413 5887 5694 2225 92 10 7 chr18 47200017 47200320 -39477228 - AluSc SINE Alu -5 304 1 1799 128 22 50 chr18 47200320 47200436 -39477112 - L1MA5 LINE L1 -606 5694 5576 502 205 11 162 chr18 47200457 47200567 -39476981 - MIR SINE MIR -93 169 97 2165 98 0 22 chr18 47200567 47200883 -39476665 - AluSg SINE Alu -1 309 1 502 205 11 162 chr18 47200883 47200957 -39476591 - MIR SINE MIR -165 97 13 317 284 113 18 chr18 47201132 47201354 -39476194 - L2 LINE L2 -519 2795 2553 2347 113 3 0 chr18 47201558 47201867 -39475681 - AluSp SINE Alu -2 311 2 192 241 37 37 chr18 47203073 47203127 -39474421 + L2 LINE L2 3198 3251 -21 428 279 62 34 chr18 47203159 47203338 -39474210 - MIR SINE MIR 0 262 79 2246 107 3 0 chr18 47204271 47204561 -39472987 + AluSx SINE Alu 2 292 -20 234 191 0 0 chr18 47204784 47204831 -39472717 + (TCCA)n Simple_repeat Simple_repeat 4 50 0 1720 193 52 39 chr18 47205921 47206305 -39471243 + MLT1B LTR MaLR 2 390 0 21 71 0 0 chr18 47206340 47206382 -39471166 + AT_rich Low_complexity Low_complexity 1 42 0 813 138 51 22 chr18 47206490 47206655 -39470893 - AluYb8 SINE Alu 0 314 146 1103 54 0 8 chr18 47206656 47206786 -39470762 + AluSg SINE Alu 3 131 -179 223 258 57 50 chr18 47206803 47206914 -39470634 - MIR SINE MIR -47 161 45 192 274 121 16 chr18 47209319 47209443 -39468105 - MIR SINE MIR -32 230 94 1966 168 3 0 chr18 47209593 47209891 -39467657 + AluJo SINE Alu 1 299 -13 189 0 0 0 chr18 47210681 47210702 -39466846 + (T)n Simple_repeat Simple_repeat 1 21 0 2442 88 15 9 chr18 47210959 47211290 -39466258 - L1PB1 LINE L1 -1 6150 5818 2215 158 29 16 chr18 47211405 47211790 -39465758 - MLT1B LTR MaLR 0 390 1 732 222 19 19 chr18 47213013 47213175 -39464373 - MER5A DNA MER1_type -22 167 6 291 356 40 6 chr18 47213947 47214121 -39463427 - MIR3 SINE MIR -26 182 3 22 0 0 0 chr18 47215692 47215714 -39461834 + AT_rich Low_complexity Low_complexity 1 22 0 2141 107 3 24 chr18 47217503 47217801 -39459747 - AluSx SINE Alu -20 292 1 455 252 52 7 chr18 47217946 47218081 -39459467 - MER5B DNA MER1_type 0 178 38 330 278 97 7 chr18 47219044 47219188 -39458360 - MIR SINE MIR -9 253 97 22 56 0 0 chr18 47220470 47220506 -39457042 + AT_rich Low_complexity Low_complexity 1 36 0 2527 50 3 3 chr18 47220509 47220807 -39456741 + AluY SINE Alu 1 298 -13 1857 154 62 3 chr18 47221298 47221623 -39455925 - MER2 DNA MER2_type 0 344 1 203 268 71 0 chr18 47222889 47222945 -39454603 - L2 LINE L2 0 3313 3254 192 347 10 0 chr18 47223804 47223902 -39453646 + MIR SINE MIR 164 262 0 337 229 237 0 chr18 47224113 47224164 -39453384 - L1MA10 LINE L1 -4 6330 6280 615 194 21 170 chr18 47224164 47224494 -39453054 - L1ME1 LINE L1 -75 6091 5811 212 225 8 171 chr18 47225721 47225850 -39451698 + MIR SINE MIR 85 192 -70 1165 157 0 24 chr18 47227842 47228052 -39449496 - L1PA16 LINE L1 -13 6153 5949 233 224 0 112 chr18 47228172 47228279 -39449269 + MIR3 SINE MIR 2 96 -112 1545 160 65 0 chr18 47228280 47228573 -39448975 + MER33 DNA MER1_type 1 312 -12 229 236 18 0 chr18 47230761 47230816 -39446732 + MARNA DNA Mariner 292 347 -239 243 61 0 0 chr18 47230995 47231028 -39446520 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 295 376 57 47 chr18 47231028 47231307 -39446241 - L2 LINE L2 -15 3257 2976 235 244 118 25 chr18 47231374 47231493 -39446055 + MER103 DNA DNA 35 164 -2 294 331 8 8 chr18 47233447 47233574 -39443974 + MIR SINE MIR 119 245 -17 267 277 53 11 chr18 47233714 47233808 -39443740 - L2 LINE L2 -8 3305 3208 329 340 10 0 chr18 47235100 47235197 -39442351 + MIR SINE MIR 52 149 -113 2309 120 0 0 chr18 47237032 47237340 -39440208 - AluSx SINE Alu -3 309 2 484 268 33 27 chr18 47237778 47237961 -39439587 - MIR SINE MIR -16 246 63 637 245 64 25 chr18 47238243 47238447 -39439101 - MIR SINE MIR -30 232 21 184 171 0 0 chr18 47238757 47238792 -39438756 - MIR SINE MIR -65 143 109 224 308 0 16 chr18 47238902 47238990 -39438558 - MIR SINE MIR -107 101 15 380 308 14 14 chr18 47240021 47240164 -39437384 - MIR3 SINE MIR 0 208 66 186 43 0 0 chr18 47240700 47240723 -39436825 + (GAAAA)n Simple_repeat Simple_repeat 3 25 0 2922 106 21 5 chr18 47240725 47241148 -39436400 - MER57B LTR ERV1 -4 430 1 199 259 19 0 chr18 47241569 47241623 -39435925 + L2 LINE L2 3191 3245 -27 1253 207 24 0 chr18 47244058 47244309 -39433239 - MER58B DNA MER1_type -15 326 70 316 285 89 8 chr18 47244346 47244469 -39433079 + MIR3 SINE MIR 14 146 -62 2453 88 0 16 chr18 47244818 47245135 -39432413 + AluSx SINE Alu 1 312 0 462 271 143 52 chr18 47245469 47245494 -39432054 - MIR SINE MIR -1 261 240 2351 171 39 2 chr18 47245494 47245903 -39431645 - MSTB LTR MaLR 0 426 3 462 271 143 52 chr18 47245903 47246087 -39431461 - MIR SINE MIR -22 240 33 189 241 114 25 chr18 47246812 47246891 -39430657 - L3 LINE CR1 -256 1321 1236 614 149 65 0 chr18 47247017 47247124 -39430424 - FRAM SINE Alu -14 162 49 182 339 0 0 chr18 47247167 47247232 -39430316 - MIR SINE MIR -112 150 86 789 251 105 22 chr18 47247670 47248040 -39429508 - L1ME2 LINE L1 -280 5884 5484 579 315 50 0 chr18 47248966 47249207 -39428341 - MIR SINE MIR -7 255 3 241 235 168 50 chr18 47249265 47249384 -39428164 - MER5B DNA MER1_type -45 133 1 532 295 98 0 chr18 47249747 47249940 -39427608 + MIR SINE MIR 51 262 0 349 234 242 0 chr18 47251238 47251366 -39426182 + MIR SINE MIR 22 180 -82 522 167 10 0 chr18 47251479 47251575 -39425973 + MIR SINE MIR 166 262 0 215 281 78 0 chr18 47251814 47251878 -39425670 + L2 LINE L2 3166 3234 -38 269 320 0 0 chr18 47252291 47252369 -39425179 - MIR SINE MIR -116 146 69 283 275 99 0 chr18 47254753 47254844 -39422704 - MIR SINE MIR -60 202 103 377 333 23 114 chr18 47255109 47255451 -39422097 - L2 LINE L2 -10 3262 2952 2365 89 3 0 chr18 47256322 47256614 -39420934 + AluSq SINE Alu 6 298 -15 304 328 127 0 chr18 47257294 47257428 -39420120 + L2 LINE L2 3121 3271 -1 345 364 5 11 chr18 47258906 47259093 -39418455 + MER5A DNA MER1_type 2 187 -2 205 301 97 11 chr18 47260551 47260644 -39416904 - MIR3 SINE MIR -107 101 1 186 274 16 32 chr18 47260656 47260718 -39416830 - L3 LINE CR1 -15 1562 1502 401 213 0 0 chr18 47261387 47261467 -39416081 - MER116 DNA Mariner 0 80 1 194 232 0 89 chr18 47263716 47263772 -39413776 + MER5B DNA MER1_type 102 152 -26 209 279 115 39 chr18 47263823 47263927 -39413621 - MIR3 SINE MIR -95 113 2 195 204 0 0 chr18 47264820 47264874 -39412674 + (TCCA)n Simple_repeat Simple_repeat 3 56 0 1923 117 25 110 chr18 47265137 47265574 -39411974 - L1MB4 LINE L1 -7 6173 5774 218 306 0 14 chr18 47268406 47268478 -39409070 + L3 LINE CR1 1504 1574 -3 4649 153 24 82 chr18 47269477 47270191 -39407357 + MER4D LTR ERV1 1 646 -257 2309 96 0 10 chr18 47270191 47270505 -39407043 - AluY SINE Alu 0 311 1 4649 153 24 82 chr18 47270505 47270749 -39406799 + MER4D LTR ERV1 646 903 0 1925 127 0 83 chr18 47270944 47271268 -39406280 - AluSx SINE Alu -15 297 1 264 30 0 0 chr18 47271558 47271591 -39405957 + (CA)n Simple_repeat Simple_repeat 2 34 0 677 186 31 0 chr18 47271801 47271930 -39405618 + MER94 DNA DNA 1 133 -1 204 329 63 0 chr18 47272772 47272851 -39404697 + MIR SINE MIR 21 104 -104 227 237 72 86 chr18 47273159 47273298 -39404250 - L2 LINE L2 0 3313 3177 2533 228 67 36 chr18 47273299 47273600 -39403948 - MER82 DNA MER2_type -1 652 362 1822 145 59 0 chr18 47273600 47273889 -39403659 - AluSx SINE Alu -3 309 4 2533 228 67 36 chr18 47273889 47274219 -39403329 - MER82 DNA MER2_type -291 362 2 380 328 148 38 chr18 47274333 47274760 -39402788 - L2 LINE L2 -352 2962 2489 786 252 122 31 chr18 47276246 47276567 -39400981 - MER21B LTR ERV1 -111 752 403 257 297 50 10 chr18 47277291 47277392 -39400156 - L2 LINE L2 0 3313 3209 941 296 66 44 chr18 47277823 47278167 -39399381 - L1ME LINE L1 -513 5651 5316 2068 136 7 3 chr18 47278167 47278462 -39399086 - AluSx SINE Alu -16 296 1 941 296 66 44 chr18 47278462 47278651 -39398897 - L1ME LINE L1 -848 5316 5133 1685 114 0 124 chr18 47278651 47278966 -39398582 + AluSx SINE Alu 1 276 -36 342 107 0 0 chr18 47278974 47279030 -39398518 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 941 296 66 44 chr18 47279030 47279079 -39398469 - L1ME LINE L1 -1037 5127 5081 1885 161 3 0 chr18 47279079 47279371 -39398177 + AluJb SINE Alu 1 293 -19 941 296 66 44 chr18 47279371 47279690 -39397858 - L1ME LINE L1 -1083 5081 4700 272 321 12 0 chr18 47280442 47280526 -39397022 + MIR3 SINE MIR 112 196 -12 189 264 132 33 chr18 47280586 47280677 -39396871 + MIR3 SINE MIR 104 203 -5 342 310 23 76 chr18 47280689 47280860 -39396688 - MIR SINE MIR -88 174 13 1805 164 3 13 chr18 47283357 47283661 -39393887 - AluJb SINE Alu -11 301 1 182 297 9 108 chr18 47283753 47283864 -39393684 - L2 LINE L2 -100 3172 3073 325 333 44 85 chr18 47284498 47284816 -39392732 - L2 LINE L2 0 3272 2968 2547 101 25 11 chr18 47284881 47285238 -39392310 - MER57B LTR ERV1 -72 362 1 510 307 108 14 chr18 47286094 47286306 -39391242 - MIR SINE MIR -10 252 21 186 308 0 0 chr18 47286631 47286683 -39390865 + L2 LINE L2 3179 3230 -83 272 367 83 0 chr18 47288256 47288376 -39389172 - L2 LINE L2 -4 3268 3139 3325 122 14 65 chr18 47288523 47289080 -39388468 + L1PA16 LINE L1 5621 6149 -17 3295 37 19 0 chr18 47289105 47289484 -39388064 - L1PA4 LINE L1 0 6155 5770 6524 33 1 4 chr18 47289490 47290249 -39387299 - L1PA3 LINE L1 0 6155 5399 27 0 0 0 chr18 47290254 47290281 -39387267 + AT_rich Low_complexity Low_complexity 1 27 0 258 280 86 0 chr18 47290288 47290381 -39387167 - MIR SINE MIR -49 213 113 4786 202 50 111 chr18 47290956 47292328 -39385220 - L1MC4a LINE L1 0 7808 6543 201 74 0 0 chr18 47292328 47292355 -39385193 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 4786 202 50 111 chr18 47292355 47292554 -39384994 - L1MC4a LINE L1 -1265 6543 6333 2189 144 25 35 chr18 47292557 47292925 -39384623 - THE1B LTR MaLR 0 364 1 428 349 40 0 chr18 47292984 47293110 -39384438 + L3 LINE CR1 1038 1168 -409 714 301 81 20 chr18 47293211 47293507 -39384041 + L3 LINE CR1 1157 1470 -107 641 293 31 60 chr18 47293917 47294235 -39383313 - L2 LINE L2 -10 3303 2995 189 222 156 0 chr18 47295640 47295685 -39381863 - L2 LINE L2 -14 3258 3207 197 264 56 80 chr18 47296185 47296310 -39381238 + L2 LINE L2 3182 3303 -10 237 33 0 0 chr18 47297043 47297073 -39380475 + (TG)n Simple_repeat Simple_repeat 2 31 0 610 346 51 7 chr18 47298148 47298440 -39379108 + LTR16C LTR ERVL 187 491 0 365 323 81 0 chr18 47298563 47298687 -39378861 - MIR3 SINE MIR -40 168 35 3561 139 24 3 chr18 47299600 47300196 -39377352 + L1MA1 LINE L1 4343 4950 -1196 5358 103 23 32 chr18 47300196 47300991 -39376557 + L1MA1 LINE L1 5493 6298 -4 1134 310 72 30 chr18 47301069 47301611 -39375937 - MLT1K LTR MaLR 0 588 24 247 317 40 0 chr18 47303625 47303726 -39373822 + MIR SINE MIR 121 225 -37 964 265 132 16 chr18 47303883 47304294 -39373254 - L2 LINE L2 -89 3224 2782 260 214 0 0 chr18 47305268 47305310 -39372238 + MIR SINE MIR 59 100 -162 376 228 58 35 chr18 47305312 47305483 -39372065 - MER104 DNA Tc2 0 180 6 1956 142 34 0 chr18 47305499 47305794 -39371754 - AluJo SINE Alu -7 305 1 221 253 126 0 chr18 47305815 47305902 -39371646 + MIR SINE MIR 154 251 -11 850 185 201 11 chr18 47306352 47306536 -39371012 - MER20 DNA MER1_type 0 219 1 1221 186 112 0 chr18 47306679 47306894 -39370654 + MER8 DNA MER2_type 1 239 0 335 227 163 21 chr18 47307031 47307172 -39370376 - MIR SINE MIR -81 181 21 898 166 5 57 chr18 47307946 47308139 -39369409 - MER20 DNA MER1_type -11 208 26 294 311 5 2 chr18 47308185 47308297 -39369251 - MIR SINE MIR -64 144 32 266 275 14 0 chr18 47309374 47309443 -39368105 + (CA)n Simple_repeat Simple_repeat 1 70 0 224 203 31 0 chr18 47310883 47310947 -39366601 + CT-rich Low_complexity Low_complexity 3 68 0 1126 162 84 52 chr18 47311934 47312242 -39365306 + MER33 DNA MER1_type 1 318 -6 959 236 149 73 chr18 47312305 47312787 -39364761 + LTR33A LTR ERVL 2 520 -3 483 196 0 112 chr18 47313063 47313206 -39364342 - L1MD3 LINE L1 0 7995 7869 249 286 0 105 chr18 47313294 47313399 -39364149 - MIR3 SINE MIR -17 191 98 204 295 21 53 chr18 47314239 47314334 -39363214 - L2 LINE L2 -77 3195 3104 230 0 33 0 chr18 47314685 47314715 -39362833 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 350 248 215 0 chr18 47314879 47315000 -39362548 + MIR SINE MIR 104 250 -12 2428 81 0 13 chr18 47315060 47315367 -39362181 + AluSg SINE Alu 1 303 -7 199 355 40 8 chr18 47315950 47316074 -39361474 + MIR SINE MIR 81 208 -54 242 299 134 38 chr18 47316454 47316611 -39360937 + MER5B DNA MER1_type 1 172 -6 180 0 0 0 chr18 47317004 47317024 -39360524 + (T)n Simple_repeat Simple_repeat 1 20 0 1392 144 171 23 chr18 47317096 47317359 -39360189 + AluJo SINE Alu 1 302 0 1508 188 24 24 chr18 47318352 47318644 -39358904 - AluJo SINE Alu -20 292 1 223 299 204 30 chr18 47318682 47318849 -39358699 + MIR SINE MIR 2 197 -65 1924 143 55 22 chr18 47321721 47322084 -39355464 + THE1C LTR MaLR 1 375 0 311 267 50 42 chr18 47322217 47322337 -39355211 - MIR3 SINE MIR -17 191 71 285 288 0 0 chr18 47324267 47324340 -39353208 + (TA)n Simple_repeat Simple_repeat 2 74 0 215 312 3 0 chr18 47324970 47325046 -39352502 + MIR SINE MIR 33 110 -98 328 204 146 10 chr18 47325170 47325273 -39352275 - L2 LINE L2 0 3313 3197 252 279 0 0 chr18 47325486 47325547 -39352001 + MIR SINE MIR 15 75 -187 258 291 91 9 chr18 47326922 47327032 -39350516 - MIR3 SINE MIR -17 191 73 699 229 62 0 chr18 47327363 47327507 -39350041 - MER63A DNA MER1_type 0 210 58 189 0 0 0 chr18 47327512 47327533 -39350015 + (TTG)n Simple_repeat Simple_repeat 1 21 0 258 366 20 0 chr18 47329494 47329595 -39347953 - L2 LINE L2 -21 3251 3149 238 301 39 84 chr18 47331224 47331427 -39346121 - MIR SINE MIR -68 194 1 2079 130 3 0 chr18 47331796 47332107 -39345441 + AluSx SINE Alu 1 312 0 223 324 84 28 chr18 47332134 47332276 -39345272 - MIR3 SINE MIR -1 207 58 335 267 0 0 chr18 47332410 47332485 -39345063 - MER5A DNA MER1_type -102 87 13 1166 190 75 13 chr18 47332505 47332810 -39344738 - MER33 DNA MER1_type 0 324 1 224 315 27 0 chr18 47333085 47333158 -39344390 + L3 LINE CR1 1503 1577 0 297 238 119 44 chr18 47333475 47333675 -39343873 + MIR SINE MIR 3 262 0 324 258 31 74 chr18 47334265 47334428 -39343120 - MIR3 SINE MIR -22 186 31 5165 98 0 14 chr18 47334773 47335474 -39342074 + LTR8 LTR ERV1 1 691 0 245 262 16 0 chr18 47336052 47336113 -39341435 + L2 LINE L2 3205 3266 -6 297 75 0 0 chr18 47338008 47338048 -39339500 + (AATTG)n Simple_repeat Simple_repeat 2 41 0 220 264 161 0 chr18 47338431 47338518 -39339030 + L2 LINE L2 3201 3301 -12 218 32 32 0 chr18 47338526 47338557 -39338991 + (TTG)n Simple_repeat Simple_repeat 2 33 0 762 127 34 0 chr18 47338557 47338675 -39338873 - AluSq/x SINE Alu -189 124 3 1004 300 84 28 chr18 47338949 47339482 -39338066 - L3 LINE CR1 -89 1488 926 235 330 94 0 chr18 47390034 47390140 -39287408 + L2 LINE L2 3157 3272 0 307 308 8 43 chr18 47391591 47391708 -39285840 - MER5B DNA MER1_type -62 116 4 223 354 40 4 chr18 47392943 47393056 -39284492 + MIR SINE MIR 18 140 -68 421 291 57 7 chr18 47393682 47393823 -39283725 + MER117 DNA MER1_type 6 153 -44 459 348 0 0 chr18 47393866 47394004 -39283544 - MIR3 SINE MIR -51 157 20 190 314 43 0 chr18 47394172 47394242 -39283306 - MIR3 SINE MIR -3 205 133 * 222 297 44 55 chr18 47394236 47394327 -39283221 - L3 LINE CR1 -8 1569 1480 284 290 199 15 chr18 47396346 47396477 -39281071 - MIR SINE MIR -30 232 78 211 320 48 10 chr18 47396688 47396791 -39280757 - L2 LINE L2 -15 3257 3151 813 277 23 27 chr18 47397454 47397710 -39279838 + MIR SINE MIR 8 262 0 268 204 0 0 chr18 47398002 47398051 -39279497 - MLT1I LTR MaLR 0 409 361 2335 55 48 0 chr18 47398841 47399131 -39278417 - AluY SINE Alu -7 304 1 344 65 0 156 chr18 47400696 47400773 -39276775 + L1MC1 LINE L1 6258 6322 -11 348 258 235 41 chr18 47401245 47401466 -39276082 - L2 LINE L2 0 3313 3050 8062 27 0 0 chr18 47401702 47402790 -39274758 - L1PA4 LINE L1 0 6155 5064 325 257 9 46 chr18 47402799 47402908 -39274640 - MIR SINE MIR -108 154 50 231 287 52 35 chr18 47403895 47404010 -39273538 - L2 LINE L2 -51 3262 3146 287 301 204 5 chr18 47404573 47404779 -39272769 - MIR SINE MIR -6 256 10 1323 110 26 44 chr18 47405309 47405616 -39271932 - L1M3 LINE L1 -694 5474 5171 * 3261 140 8 117 chr18 47405615 47406349 -39271199 + L1MB1 LINE L1 5515 6168 0 260 245 105 69 chr18 47406358 47406494 -39271054 - MIR3 SINE MIR -46 162 19 736 302 111 62 chr18 47406515 47407117 -39270431 - L3 LINE CR1 -332 1245 614 207 167 0 0 chr18 47407337 47407379 -39270169 + T-rich Low_complexity Low_complexity 1 42 0 6643 91 3 3 chr18 47407384 47408438 -39269110 - L1PA14 LINE L1 0 6161 5100 661 263 74 16 chr18 47408441 47408631 -39268917 + MIR SINE MIR 44 244 -18 180 0 0 0 chr18 47408656 47408676 -39268872 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 338 295 120 22 chr18 47408730 47408913 -39268635 - MIR SINE MIR -6 256 56 2613 170 20 58 chr18 47409172 47409724 -39267824 + L1MB3 LINE L1 5651 6181 -2 786 253 0 0 chr18 47409778 47409948 -39267600 - MIR SINE MIR -70 192 23 322 232 0 12 chr18 47410792 47410874 -39266674 - L1MC4 LINE L1 -7 8035 7955 * 3654 231 72 15 chr18 47410865 47411838 -39265710 - L1MC4 LINE L1 -306 7736 6709 506 220 75 75 chr18 47411840 47412067 -39265481 + L2 LINE L2 2995 3221 -92 464 352 135 27 chr18 47412146 47412629 -39264919 - L2 LINE L2 -353 2961 2427 277 196 22 0 chr18 47413459 47413505 -39264043 - MIR SINE MIR -121 87 41 2002 174 55 42 chr18 47413709 47414094 -39263454 - MLT1B LTR MaLR 0 390 1 417 39 0 0 chr18 47414479 47414530 -39263018 + (TGAA)n Simple_repeat Simple_repeat 4 54 0 257 367 161 32 chr18 47414538 47415001 -39262547 + L2 LINE L2 2707 3234 -38 184 268 171 85 chr18 47415260 47415424 -39262124 + MER5B DNA MER1_type 1 178 0 201 284 45 57 chr18 47415443 47415531 -39262017 + MIR SINE MIR 44 130 -78 15204 124 25 20 chr18 47416165 47416356 -39261192 - Tigger1 DNA MER2_type -30 2388 2200 2047 119 27 7 chr18 47416356 47416651 -39260897 + AluSx SINE Alu 1 301 -11 15204 124 25 20 chr18 47416651 47418834 -39258714 - Tigger1 DNA MER2_type -218 2200 1 535 278 38 0 chr18 47419528 47419661 -39257887 + MIR3 SINE MIR 11 148 -60 186 297 90 58 chr18 47419841 47419996 -39257552 + MIR SINE MIR 36 195 -67 3873 130 0 22 chr18 47420504 47421043 -39256505 - MER1A DNA MER1_type 0 527 1 908 229 66 0 chr18 47421363 47421546 -39256002 - MER82 DNA MER2_type 0 653 459 942 203 28 0 chr18 47421750 47421927 -39255621 - MER82 DNA MER2_type -470 183 2 229 230 111 87 chr18 47422778 47422904 -39254644 + L2 LINE L2 3180 3308 -5 529 266 173 0 chr18 47423524 47423697 -39253851 - MER102b DNA MER1_type -2 339 137 560 244 56 56 chr18 47424449 47424646 -39252902 + MIR SINE MIR 10 206 -56 447 100 15 0 chr18 47425275 47425347 -39252201 + L1PA7 LINE L1 6074 6170 -2 242 366 8 8 chr18 47425416 47425494 -39252054 - L2 LINE L2 -3 3269 3189 225 0 0 0 chr18 47425494 47425519 -39252029 + (TA)n Simple_repeat Simple_repeat 2 26 0 242 366 8 8 chr18 47425519 47425563 -39251985 - L2 LINE L2 -82 3190 3147 189 147 0 0 chr18 47426956 47426990 -39250558 + (T)n Simple_repeat Simple_repeat 1 34 0 2760 109 8 8 chr18 47428055 47428430 -39249118 - THE1C LTR MaLR 0 375 1 2240 111 0 0 chr18 47430214 47430511 -39247037 + AluSx SINE Alu 1 297 -15 2382 207 60 10 chr18 47430663 47431142 -39246406 - MLT1F LTR MaLR -7 535 33 2367 107 0 0 chr18 47431452 47431760 -39245788 - AluSc SINE Alu -1 308 1 22 0 0 0 chr18 47432086 47432108 -39245440 + AT_rich Low_complexity Low_complexity 1 22 0 246 380 53 7 chr18 47434224 47434374 -39243174 - MIR3 SINE MIR -13 195 39 28 48 0 0 chr18 47434380 47434422 -39243126 + AT_rich Low_complexity Low_complexity 1 42 0 328 270 230 21 chr18 47434941 47435087 -39242461 + MIR3 SINE MIR 28 204 -4 313 301 88 29 chr18 47435340 47435524 -39242024 - MIR SINE MIR -51 211 20 300 256 11 22 chr18 47437293 47437383 -39240165 + L1MC4 LINE L1 6614 6702 -1340 * 308 261 34 11 chr18 47437304 47437392 -39240156 - L1MC4 LINE L1 -1339 6703 6614 459 125 0 0 chr18 47437392 47437464 -39240084 + (CA)n Simple_repeat Simple_repeat 2 73 0 207 267 77 66 chr18 47438276 47438453 -39239095 + MIR SINE MIR 33 205 -57 367 283 51 36 chr18 47438525 47438710 -39238838 + MIR SINE MIR 30 210 -47 24 0 0 0 chr18 47439896 47439920 -39237628 + AT_rich Low_complexity Low_complexity 1 24 0 368 319 41 41 chr18 47440864 47441033 -39236515 - MIR3 SINE MIR -28 180 12 1318 112 0 17 chr18 47441263 47441482 -39236066 - AluY SINE Alu 0 323 108 21 0 0 0 chr18 47441961 47441982 -39235566 + AT_rich Low_complexity Low_complexity 1 21 0 205 133 44 0 chr18 47441994 47442039 -39235509 + (TG)n Simple_repeat Simple_repeat 1 47 0 453 297 121 16 chr18 47442058 47442240 -39235308 + MIR SINE MIR 56 256 -6 397 314 36 0 chr18 47443846 47443983 -39233565 + MIR SINE MIR 49 190 -72 24 0 0 0 chr18 47443987 47444011 -39233537 + AT_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr18 47445180 47445200 -39232348 + (TTG)n Simple_repeat Simple_repeat 2 21 0 713 314 210 12 chr18 47446351 47447007 -39230541 + L3 LINE CR1 534 1319 -258 265 307 213 10 chr18 47448421 47448623 -39228925 - MIR SINE MIR -16 246 4 271 288 12 12 chr18 47448705 47448785 -39228763 - L2 LINE L2 -2 3311 3232 248 213 0 0 chr18 47449211 47449258 -39228290 + GA-rich Low_complexity Low_complexity 2 48 0 1418 185 38 28 chr18 47449713 47450000 -39227548 + AluJo SINE Alu 1 290 -22 442 360 27 7 chr18 47450186 47450333 -39227215 - L2 LINE L2 -6 3266 3117 335 262 58 19 chr18 47451352 47451455 -39226093 + MIR SINE MIR 56 162 -100 495 229 65 39 chr18 47452839 47452953 -39224595 + MIR SINE MIR 52 172 -90 2897 179 4 4 chr18 47452953 47453418 -39224130 - MLT1C LTR MaLR 0 467 3 495 229 65 39 chr18 47453418 47453456 -39224092 + MIR SINE MIR 172 208 -54 3288 146 37 30 chr18 47453879 47454502 -39223046 - MER39B LTR ERV1 -26 620 1 287 262 12 0 chr18 47455003 47455087 -39222461 + MIR3 SINE MIR 124 208 0 250 288 0 15 chr18 47455646 47455712 -39221836 + L2 LINE L2 3208 3272 0 2299 116 0 0 chr18 47455818 47456121 -39221427 - AluSg SINE Alu -7 303 1 519 259 24 48 chr18 47456201 47456367 -39221181 + MIR SINE MIR 45 206 -56 208 290 137 38 chr18 47456756 47456887 -39220661 + MIR SINE MIR 119 262 0 1711 203 38 27 chr18 47456927 47457297 -39220251 + MLT1A2 LTR MaLR 1 374 0 204 271 0 0 chr18 47457616 47457664 -39219884 + C-rich Low_complexity Low_complexity 3 50 0 229 274 29 59 chr18 47459035 47459137 -39218411 + MER94 DNA DNA 1 99 -35 234 338 19 57 chr18 47459448 47459605 -39217943 + L2 LINE L2 3159 3309 -4 1277 276 40 42 chr18 47461459 47461883 -39215665 - LTR16C LTR ERVL 0 491 69 27 0 0 0 chr18 47462300 47462327 -39215221 + AT_rich Low_complexity Low_complexity 1 27 0 366 185 12 0 chr18 47462674 47462755 -39214793 + MER96B DNA MER1_type? 45 126 -291 256 203 102 0 chr18 47462893 47462952 -39214596 + MIR SINE MIR 15 79 -183 494 250 17 0 chr18 47463686 47463806 -39213742 + MER94 DNA DNA 2 123 -11 1700 214 37 16 chr18 47464022 47464401 -39213147 - MER96B DNA MER1_type? -1 416 30 2462 90 0 0 chr18 47464548 47464858 -39212690 - AluSg SINE Alu 0 310 1 230 236 83 108 chr18 47464875 47465032 -39212516 - MIR3 SINE MIR -6 202 50 5708 84 1 1 chr18 47465053 47465822 -39211726 - L1P LINE L1 -842 5304 4536 4373 62 11 0 chr18 47465822 47466375 -39211173 + L1PA7 LINE L1 5616 6154 0 579 300 61 52 chr18 47466375 47466685 -39210863 - L2 LINE L2 -20 3293 2981 1091 189 20 0 chr18 47466726 47466927 -39210621 - MER20 DNA MER1_type -12 207 3 590 252 19 13 chr18 47468415 47468574 -39208974 + MIR SINE MIR 15 174 -88 413 235 39 39 chr18 47469330 47469432 -39208116 - MIR3 SINE MIR -20 188 87 240 273 15 0 chr18 47470189 47470255 -39207293 + MIR SINE MIR 66 132 -76 331 272 176 0 chr18 47473490 47473615 -39203933 + MIR SINE MIR 104 250 -12 201 396 0 0 chr18 47474076 47474182 -39203366 + MIR SINE MIR 145 250 -12 506 351 21 5 chr18 47474866 47475054 -39202494 + MIR3 SINE MIR 15 205 -3 218 260 13 13 chr18 47475816 47475893 -39201655 + GA-rich Low_complexity Low_complexity 2 78 0 237 128 0 0 chr18 47476262 47476309 -39201239 + (TCCA)n Simple_repeat Simple_repeat 2 48 0 180 254 18 36 chr18 47476666 47476721 -39200827 - MIR SINE MIR 0 262 209 205 259 0 17 chr18 47476978 47477036 -39200512 + GA-rich Low_complexity Low_complexity 2 58 0 306 283 25 17 chr18 47477538 47477658 -39199890 - L2 LINE L2 0 3313 3193 552 287 98 69 chr18 47477866 47478315 -39199233 - MLT1K LTR MaLR 0 588 127 240 35 0 0 chr18 47481463 47481492 -39196056 + (ATG)n Simple_repeat Simple_repeat 2 30 0 641 304 104 66 chr18 47481580 47482308 -39195240 - HAL1b LINE L1 -504 844 89 32600 106 9 67 chr18 47482588 47489116 -39188432 - L1PA7 LINE L1 -3 6151 12 224 333 0 0 chr18 47489924 47489990 -39187558 + L2 LINE L2 3197 3262 -10 27 0 0 0 chr18 47491600 47491627 -39185921 + AT_rich Low_complexity Low_complexity 1 27 0 878 260 56 11 chr18 47492716 47493001 -39184547 + L1ME4a LINE L1 5528 5825 -296 1473 242 74 72 chr18 47493005 47493546 -39184002 - MLT1F1 LTR MaLR 0 567 1 351 280 73 44 chr18 47493549 47493824 -39183724 + L1ME4a LINE L1 5828 6110 -11 564 304 136 33 chr18 47494693 47495025 -39182523 - MLT1J2 LTR MaLR -21 429 64 267 287 26 78 chr18 47495737 47495852 -39181696 - MIR SINE MIR -51 211 103 398 276 35 0 chr18 47497521 47497637 -39179911 - MIR3 SINE MIR -6 202 83 2299 177 35 55 chr18 47497670 47498183 -39179365 - MLT1D LTR MaLR 0 505 3 647 247 85 74 chr18 47498249 47498532 -39179016 - LTR16A LTR ERVL 0 450 165 186 43 0 0 chr18 47499050 47499073 -39178475 + (CAGGG)n Simple_repeat Simple_repeat 2 24 0 1848 162 0 0 chr18 47499927 47500205 -39177343 + AluSx SINE Alu 22 299 -13 213 293 20 30 chr18 47500206 47500306 -39177242 - MIR SINE MIR -64 144 78 381 323 55 0 chr18 47500544 47500708 -39176840 - MIR SINE MIR -42 220 48 983 281 75 54 chr18 47500804 47501920 -39175628 + L1MC/D LINE L1 4644 5783 -743 618 268 84 94 chr18 47502602 47502951 -39174597 - MLT1J LTR MaLR -52 459 115 1652 177 86 17 chr18 47502951 47503302 -39174246 - THE1C LTR MaLR 0 375 1 618 268 84 94 chr18 47503302 47503414 -39174134 - MLT1J LTR MaLR -396 115 3 192 250 29 15 chr18 47505033 47505101 -39172447 + L2 LINE L2 2404 2472 -842 1908 126 0 18 chr18 47505102 47505380 -39172168 - AluSx SINE Alu -39 273 1 375 23 0 0 chr18 47505578 47505622 -39171926 + (CA)n Simple_repeat Simple_repeat 1 44 0 200 226 0 32 chr18 47505963 47506025 -39171523 + A-rich Low_complexity Low_complexity 1 60 0 2044 176 29 103 chr18 47506947 47507170 -39170378 + MLT2B3 LTR ERVL 1 239 -315 1966 112 16 56 chr18 47507170 47507474 -39170074 + AluSq SINE Alu 1 292 -21 2044 176 29 103 chr18 47507474 47507795 -39169753 + MLT2B3 LTR ERVL 239 505 -49 262 157 78 0 chr18 47507795 47507846 -39169702 + L1MC4 LINE L1 6658 6712 -1330 427 288 71 52 chr18 47507969 47508236 -39169312 - L2 LINE L2 -5 3308 3037 351 325 30 6 chr18 47509438 47509607 -39167941 + L2 LINE L2 1713 1885 -1429 370 298 38 19 chr18 47510116 47510274 -39167274 + MIR SINE MIR 32 192 -70 255 222 63 111 chr18 47510412 47510538 -39167010 + MIR SINE MIR 88 207 -55 2860 10 0 0 chr18 47510977 47511283 -39166265 + AluY SINE Alu 1 306 -5 369 285 53 20 chr18 47511719 47511870 -39165678 - MIR SINE MIR -42 220 65 205 303 10 30 chr18 47512794 47512893 -39164655 - MER5A DNA MER1_type -13 176 80 252 310 60 0 chr18 47513018 47513118 -39164430 + L2 LINE L2 3144 3249 -23 254 402 2 4 chr18 47513420 47513546 -39164002 - MIR SINE MIR -64 144 20 185 303 131 0 chr18 47514578 47514677 -39162871 - MIR SINE MIR -66 142 31 1059 221 136 45 chr18 47517098 47517524 -39160024 + MLT1C LTR MaLR 1 465 -2 271 336 9 0 chr18 47517666 47517779 -39159769 + MIR3 SINE MIR 71 184 -24 362 363 99 21 chr18 47518207 47518491 -39159057 - L2 LINE L2 -7 3265 2960 2200 130 72 17 chr18 47518963 47519308 -39158240 + THE1B LTR MaLR 1 364 0 229 318 0 24 chr18 47519999 47520125 -39157423 + CT-rich Low_complexity Low_complexity 2 124 0 224 314 68 0 chr18 47520598 47520716 -39156832 - MIR3 SINE MIR -18 190 65 274 324 49 0 chr18 47520756 47520858 -39156690 + MIR3 SINE MIR 48 154 -54 2262 133 88 18 chr18 47524810 47525210 -39152338 - MSTA LTR MaLR 0 428 1 181 211 0 19 chr18 47525834 47525886 -39151662 + L2 LINE L2 3261 3311 -2 298 282 21 67 chr18 47526020 47526158 -39151390 + MIR3 SINE MIR 15 145 -75 287 143 0 18 chr18 47526926 47526982 -39150566 + (TTCC)n Simple_repeat Simple_repeat 4 58 0 445 273 7 36 chr18 47527035 47527174 -39150374 + MIR3 SINE MIR 38 172 -36 253 263 63 21 chr18 47527713 47527808 -39149740 - L2 LINE L2 -28 3244 3146 216 0 0 0 chr18 47529099 47529123 -39148425 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 294 244 108 29 chr18 47531365 47531517 -39146031 + MIR SINE MIR 20 183 -68 226 273 167 23 chr18 47532386 47532518 -39145030 - MER5A DNA MER1_type 0 189 39 225 315 45 71 chr18 47532675 47532877 -39144671 + MIR3 SINE MIR 15 212 -50 1992 136 0 22 chr18 47534001 47534318 -39143230 - AluSg SINE Alu 0 310 1 253 340 38 0 chr18 47534742 47534848 -39142700 + MIR SINE MIR 153 262 0 207 0 0 0 chr18 47535814 47535837 -39141711 + (CA)n Simple_repeat Simple_repeat 2 24 0 519 229 29 7 chr18 47537659 47537799 -39139749 - MIR3 SINE MIR -6 202 60 228 305 134 30 chr18 47538293 47538457 -39139091 + MIR SINE MIR 32 212 -50 257 263 165 68 chr18 47538692 47538825 -39138723 - MER91A DNA MER1_type -1 195 50 270 0 0 0 chr18 47539258 47539288 -39138260 + (CA)n Simple_repeat Simple_repeat 2 31 0 599 243 183 25 chr18 47539433 47539868 -39137680 + MLT1H LTR MaLR 1 542 -13 325 265 82 10 chr18 47540810 47540908 -39136640 - L2 LINE L2 -1 3312 3208 20528 31 2 0 chr18 47541379 47544573 -39132975 - L1PA4 LINE L1 0 6155 2958 207 0 0 0 chr18 47544669 47544692 -39132856 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 244 143 161 0 chr18 47545265 47545321 -39132227 - MIR3 SINE MIR -13 195 131 194 240 140 40 chr18 47545423 47545523 -39132025 - MIR3 SINE MIR -32 176 67 522 289 45 0 chr18 47546135 47546291 -39131257 - MIR SINE MIR -70 192 30 249 196 0 0 chr18 47546414 47546460 -39131088 + MIR SINE MIR 100 145 -63 2209 165 50 37 chr18 47546942 47547403 -39130145 - MLT1C LTR MaLR 0 467 1 464 47 0 16 chr18 47547692 47547756 -39129792 + (TCCC)n Simple_repeat Simple_repeat 1 63 0 915 216 105 86 chr18 47547756 47548460 -39129088 - L2 LINE L2 -1 3312 2597 517 179 185 6 chr18 47548464 47548637 -39128911 - L2 LINE L2 -902 2412 2209 492 241 26 0 chr18 47548637 47548753 -39128795 - MLT1F LTR MaLR 0 567 449 1554 215 68 49 chr18 47549058 47549468 -39128080 - MLT1F LTR MaLR -118 424 7 266 222 0 12 chr18 47549525 47549606 -39127942 + CT-rich Low_complexity Low_complexity 2 81 0 198 290 75 21 chr18 47549645 47549738 -39127810 - L2 LINE L2 -20 3252 3155 236 204 0 0 chr18 47550551 47550600 -39126948 + A-rich Low_complexity Low_complexity 1 49 0 207 100 0 0 chr18 47550741 47550771 -39126777 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 2093 129 0 7 chr18 47551141 47551428 -39126120 + AluSx SINE Alu 1 285 -27 238 293 71 50 chr18 47552494 47552593 -39124955 + L2 LINE L2 3186 3286 -27 324 0 0 0 chr18 47552717 47552753 -39124795 + (T)n Simple_repeat Simple_repeat 1 36 0 250 301 41 0 chr18 47553341 47553414 -39124134 - MIR3 SINE MIR -23 185 110 54 56 0 0 chr18 47553543 47553632 -39123916 + AT_rich Low_complexity Low_complexity 1 89 0 2277 104 3 0 chr18 47553639 47553928 -39123620 - AluSx SINE Alu -22 290 1 30 27 0 0 chr18 47554022 47554059 -39123489 + AT_rich Low_complexity Low_complexity 1 37 0 301 83 0 0 chr18 47554075 47554111 -39123437 + tRNA-Lys-AAG tRNA tRNA 3 38 -38 230 294 29 0 chr18 47554155 47554223 -39123325 + MER113 DNA MER1_type? 452 521 0 2842 186 47 2 chr18 47554384 47554921 -39122627 + MER68 LTR ERV1 2 562 0 316 244 120 50 chr18 47555217 47555467 -39122081 - HAL1b LINE L1 -12 1336 1236 2342 98 3 7 chr18 47555467 47555774 -39121774 - AluSp SINE Alu -7 306 1 316 244 120 50 chr18 47555774 47555822 -39121726 - HAL1b LINE L1 -112 1236 1193 1948 261 50 4 chr18 47556176 47556694 -39120854 + MER119 DNA MER1_type 1 542 -41 267 252 95 41 chr18 47556869 47557016 -39120532 - L1ME LINE L1 -394 5727 5573 744 218 107 5 chr18 47557297 47557513 -39120035 + MIR SINE MIR 8 245 -17 262 254 45 0 chr18 47558305 47558372 -39119176 + MIR SINE MIR 84 153 -109 1783 180 14 0 chr18 47559102 47559397 -39118151 + AluJo SINE Alu 1 299 -13 266 319 0 51 chr18 47560467 47560605 -39116943 - MIR SINE MIR -57 205 75 21 0 0 0 chr18 47560652 47560673 -39116875 + AT_rich Low_complexity Low_complexity 1 21 0 365 238 50 0 chr18 47561140 47561241 -39116307 + L2 LINE L2 3136 3241 -31 209 161 54 18 chr18 47561640 47561696 -39115852 - L2 LINE L2 -208 3064 3007 207 315 27 0 chr18 47562680 47562753 -39114795 - MIR3 SINE MIR -35 173 99 591 284 191 5 chr18 47563184 47563734 -39113814 - L2 LINE L2 -67 3246 2581 201 179 0 0 chr18 47565711 47565750 -39111798 + L2 LINE L2 3265 3303 -10 458 200 0 12 chr18 47565983 47566063 -39111485 + Tigger5 DNA MER2_type 1 79 -2244 342 197 28 0 chr18 47566065 47566136 -39111412 - Tigger5 DNA MER2_type -6 2317 2245 1508 222 60 14 chr18 47566620 47566967 -39110581 - MLT1A1 LTR MaLR 0 365 3 232 288 110 8 chr18 47567043 47567161 -39110387 - L3 LINE CR1 -6 1571 1442 556 284 19 0 chr18 47567187 47567342 -39110206 + MIR SINE MIR 46 203 -59 202 220 51 0 chr18 47568078 47568137 -39109411 - L3 LINE CR1 -576 1001 940 198 324 15 0 chr18 47568856 47568924 -39108624 + L2 LINE L2 2967 3035 -237 2260 92 3 3 chr18 47569476 47569768 -39107780 - AluSc SINE Alu -17 292 1 198 370 52 22 chr18 47569772 47569907 -39107641 - L2 LINE L2 -25 3247 3109 295 289 4 21 chr18 47570900 47571007 -39106541 - MIR SINE MIR -36 172 69 228 237 17 0 chr18 47572135 47572194 -39105354 - MLT1J1 LTR MaLR -343 103 44 21 36 0 0 chr18 47572296 47572324 -39105224 + AT_rich Low_complexity Low_complexity 1 28 0 266 243 98 51 chr18 47572512 47572726 -39104822 - L1MC4a LINE L1 -1907 5901 5678 202 245 20 0 chr18 47572861 47572910 -39104638 - L2 LINE L2 -85 3228 3179 211 275 50 0 chr18 47573136 47573216 -39104332 - L2 LINE L2 -328 2985 2902 2929 148 20 108 chr18 47574024 47574775 -39102773 - MER69 DNA AcHobo -1 2525 1841 2292 275 96 17 chr18 47574772 47575471 -39102077 - MER69 DNA AcHobo -1772 754 1 * 233 361 19 13 chr18 47575719 47575805 -39101743 + (TG)n Simple_repeat Simple_repeat 2 91 -69 2253 103 0 7 chr18 47575805 47576105 -39101443 - AluY SINE Alu -13 298 1 233 361 19 13 chr18 47576105 47576176 -39101372 + (TG)n Simple_repeat Simple_repeat 91 160 0 291 326 10 0 chr18 47576245 47576343 -39101205 - MIR SINE MIR -71 137 39 672 269 36 0 chr18 47576868 47577035 -39100513 - MIR SINE MIR -88 174 2 288 0 0 0 chr18 47577195 47577227 -39100321 + (CA)n Simple_repeat Simple_repeat 1 32 0 396 0 0 0 chr18 47577735 47577779 -39099769 + (TG)n Simple_repeat Simple_repeat 2 45 0 870 244 45 98 chr18 47579099 47579517 -39098031 + MLT1I LTR MaLR 14 409 0 331 272 11 0 chr18 47580472 47580564 -39096984 + MIR SINE MIR 35 127 -81 386 243 21 36 chr18 47581516 47581656 -39095892 + L2 LINE L2 3175 3312 -1 830 212 47 0 chr18 47582604 47582774 -39094774 + MER5B DNA MER1_type 1 178 0 187 250 228 22 chr18 47583723 47583815 -39093733 - MIR SINE MIR -78 130 20 585 203 222 7 chr18 47583826 47583979 -39093569 - MER5A DNA MER1_type -3 186 1 246 286 0 0 chr18 47584859 47584915 -39092633 + (TG)n Simple_repeat Simple_repeat 2 57 0 1729 316 65 13 chr18 47585256 47585857 -39091691 - MER115 DNA AcHobo 0 693 62 204 250 0 0 chr18 47586457 47586505 -39091043 + T-rich Low_complexity Low_complexity 1 48 0 266 235 59 0 chr18 47586777 47586845 -39090703 - MLT1F1 LTR MaLR 0 595 524 531 81 14 0 chr18 47587080 47587154 -39090394 - AluY SINE Alu -234 84 10 807 238 66 51 chr18 47587154 47587296 -39090252 - MLT1F1 LTR MaLR -196 394 256 2405 179 84 21 chr18 47587296 47587821 -39089727 - MER74A LTR ERVL 0 558 1 807 238 66 51 chr18 47587821 47588071 -39089477 - MLT1F1 LTR MaLR -334 256 3 1976 221 74 23 chr18 47589367 47589879 -39087669 - MLT1H LTR MaLR 0 549 12 219 376 108 26 chr18 47590222 47590637 -39086911 - L2 LINE L2 0 3272 2824 617 287 21 5 chr18 47591177 47591365 -39086183 - MIR SINE MIR -24 238 48 392 285 104 0 chr18 47592127 47592271 -39085277 + MIR SINE MIR 25 183 -79 874 154 0 7 chr18 47592503 47592639 -39084909 - MSTD LTR MaLR 0 396 262 321 210 37 0 chr18 47593177 47593258 -39084290 - MIR3 SINE MIR -49 159 76 264 309 21 0 chr18 47593836 47593930 -39083618 + L2 LINE L2 2957 3052 -220 747 213 153 11 chr18 47594301 47594484 -39083064 + MER63A DNA MER1_type 2 210 0 710 186 274 4 chr18 47594485 47594722 -39082826 - MER33 DNA MER1_type -23 301 1 325 291 94 8 chr18 47595497 47595624 -39081924 + MIR3 SINE MIR 27 164 -44 243 203 304 0 chr18 47595629 47595777 -39081771 + L2 LINE L2 2709 2901 -413 682 242 143 15 chr18 47595783 47596056 -39081492 + L2 LINE L2 3006 3313 0 185 250 164 52 chr18 47596575 47596691 -39080857 - L2 LINE L2 -58 3255 3127 290 89 22 0 chr18 47596691 47596736 -39080812 + MADE1 DNA Mariner 1 46 -34 838 287 160 9 chr18 47596740 47597204 -39080344 - L2 LINE L2 -197 3116 2579 1932 128 45 10 chr18 47597557 47597847 -39079701 - AluSx SINE Alu -1 311 12 497 250 9 0 chr18 47598231 47598347 -39079201 - MIR3 SINE MIR -24 184 67 532 326 124 7 chr18 47598671 47598953 -39078595 + L3 LINE CR1 1262 1576 -1 224 250 164 55 chr18 47600684 47600812 -39076736 - MIR3 SINE MIR -47 161 20 649 236 52 72 chr18 47601357 47601607 -39075941 - MIR SINE MIR 0 262 18 246 200 67 133 chr18 47601869 47601914 -39075634 - MER5A DNA MER1_type -80 109 63 2380 92 0 7 chr18 47601914 47602219 -39075329 - AluSg1 SINE Alu -6 303 1 246 200 67 133 chr18 47602219 47602278 -39075270 - MER5A DNA MER1_type -126 63 12 2494 38 3 3 chr18 47603619 47603912 -39073636 + AluY SINE Alu 1 293 -18 2513 70 0 0 chr18 47604070 47604372 -39073176 - AluY SINE Alu -9 302 1 1811 118 7 54 chr18 47604587 47604774 -39072774 - AluSx SINE Alu 0 319 151 2352 96 3 0 chr18 47604774 47605065 -39072483 - AluY SINE Alu -19 292 1 1811 118 7 54 chr18 47605065 47605210 -39072338 - AluSx SINE Alu -168 151 1 31 58 0 0 chr18 47605464 47605516 -39072032 + AT_rich Low_complexity Low_complexity 1 52 0 11250 194 24 26 chr18 47605635 47605930 -39071618 - L1PA15 LINE L1 -9 6807 6513 2572 59 0 10 chr18 47605930 47606234 -39071314 + AluSp SINE Alu 1 301 -12 11250 194 24 26 chr18 47606234 47607529 -39070019 - L1PA15 LINE L1 -303 6513 5217 2274 142 50 43 chr18 47607529 47607952 -39069596 + MSTA LTR MaLR 3 428 0 8363 178 69 3 chr18 47607952 47609501 -39068047 + MSTA-int LTR MaLR 1 1651 0 2487 127 51 10 chr18 47609501 47609912 -39067636 + MSTA LTR MaLR 1 428 0 11250 194 24 26 chr18 47609912 47611688 -39065860 - L1PA15 LINE L1 -1596 5220 3451 43984 48 4 0 chr18 47611688 47617793 -39059755 - L1PA4 LINE L1 -21 6134 5 2366 114 0 0 chr18 47617803 47618111 -39059437 - AluSx SINE Alu -4 308 1 5400 227 36 41 chr18 47618116 47620510 -39057038 - L1PA15 LINE L1 -3325 3472 1061 383 246 25 8 chr18 47621120 47621238 -39056310 - MER5A DNA MER1_type -63 126 7 288 0 0 0 chr18 47621571 47621603 -39055945 + (CA)n Simple_repeat Simple_repeat 2 33 0 783 179 60 4 chr18 47621855 47622027 -39055521 + L1M4 LINE L1 4872 5048 -1098 439 263 10 0 chr18 47623680 47623779 -39053769 - MER45A DNA AcHobo 0 178 79 230 287 30 0 chr18 47624439 47624540 -39053008 - MER5B DNA MER1_type -27 151 48 382 248 189 15 chr18 47625551 47625699 -39051849 - MER5B DNA MER1_type -2 187 5 608 224 14 20 chr18 47625717 47625864 -39051684 + MER5A DNA MER1_type 23 168 -21 778 245 16 11 chr18 47625938 47626122 -39051426 + MER5A DNA MER1_type 3 187 -2 2303 96 7 0 chr18 47626779 47627080 -39050468 - AluSp SINE Alu -10 303 1 205 179 0 0 chr18 47627127 47627166 -39050382 + (TTTG)n Simple_repeat Simple_repeat 4 42 0 696 182 38 50 chr18 47627194 47627353 -39050195 + MER63A DNA MER1_type 54 210 0 258 306 83 7 chr18 47628919 47629063 -39048485 - MIR3 SINE MIR -21 187 33 2560 58 0 0 chr18 47629163 47629458 -39048090 - AluY SINE Alu -16 295 1 2913 6 0 3 chr18 47630907 47631219 -39046329 + AluYa5 SINE Alu 1 311 0 297 0 0 0 chr18 47631670 47631703 -39045845 + (A)n Simple_repeat Simple_repeat 1 33 0 272 323 71 0 chr18 47632702 47632801 -39044747 - L2 LINE L2 -5 3308 3203 364 244 0 0 chr18 47634452 47634530 -39043018 - MIR SINE MIR -85 177 100 1852 166 0 14 chr18 47634629 47634944 -39042604 + AluJo SINE Alu 1 311 0 532 256 190 19 chr18 47635104 47635315 -39042233 - MIR SINE MIR -1 261 15 352 273 9 36 chr18 47635893 47636003 -39041545 + MIR SINE MIR 86 192 -70 1088 212 0 22 chr18 47636014 47636236 -39041312 - MER20 DNA MER1_type 0 219 3 1477 141 36 36 chr18 47636945 47637036 -39040512 + AluJb SINE Alu 38 128 -184 225 0 0 0 chr18 47637036 47637061 -39040487 + (TA)n Simple_repeat Simple_repeat 1 25 0 1477 141 36 36 chr18 47637061 47637218 -39040330 + AluJb SINE Alu 127 286 -26 823 216 12 23 chr18 47637799 47637970 -39039578 + MER96 DNA MER1_type? 1 169 -6 180 299 82 21 chr18 47637970 47638067 -39039481 + MIR SINE MIR 111 213 -49 36 23 0 0 chr18 47638352 47638395 -39039153 + AT_rich Low_complexity Low_complexity 1 43 0 2424 84 3 0 chr18 47640202 47640499 -39037049 - AluSp SINE Alu -15 298 1 200 35 35 0 chr18 47641455 47641484 -39036064 + (TGG)n Simple_repeat Simple_repeat 1 30 0 1778 166 3 10 chr18 47641784 47642085 -39035463 + AluJo SINE Alu 1 299 -13 852 136 0 0 chr18 47642647 47642765 -39034783 - FRAM SINE Alu -59 117 1 420 291 35 28 chr18 47642922 47643063 -39034485 + MIR3 SINE MIR 18 159 -49 241 246 31 15 chr18 47646903 47646968 -39030580 - MIR3 SINE MIR -46 162 97 2547 41 0 3 chr18 47647144 47647438 -39030110 + AluY SINE Alu 1 293 -18 706 200 0 22 chr18 47647480 47647615 -39029933 + FAM SINE Alu 12 143 -42 28 0 0 0 chr18 47647826 47647854 -39029694 + AT_rich Low_complexity Low_complexity 1 28 0 418 270 51 7 chr18 47648010 47648147 -39029401 + MLT1J1 LTR MaLR 1 143 -303 243 280 176 8 chr18 47648242 47648367 -39029181 + MLT1J2 LTR MaLR 277 422 -28 1179 180 34 82 chr18 47648439 47648870 -39028678 + MLT1A2 LTR MaLR 2 374 0 1208 196 108 0 chr18 47649023 47649237 -39028311 + MER8 DNA MER2_type 2 238 -1 461 323 55 61 chr18 47649300 47649638 -39027910 + L1ME4a LINE L1 5263 5601 -520 2258 109 0 0 chr18 47649638 47649955 -39027593 + AluSx SINE Alu 1 317 0 461 323 55 61 chr18 47649955 47650319 -39027229 + L1ME4a LINE L1 5601 5964 -157 4536 121 0 35 chr18 47650453 47650715 -39026833 + LTR8 LTR ERV1 1 271 -420 5831 50 1 19 chr18 47650715 47651453 -39026095 + L1PA6 LINE L1 5430 6154 0 4536 121 0 35 chr18 47651453 47651883 -39025665 + LTR8 LTR ERV1 271 669 -22 257 260 82 41 chr18 47652465 47652611 -39024937 + MIR SINE MIR 65 216 -46 247 246 31 15 chr18 47652782 47652847 -39024701 + L1ME LINE L1 5514 5579 -583 45199 40 3 1 chr18 47653149 47659288 -39018260 - L1PA4 LINE L1 0 6155 1 615 186 81 8 chr18 47659359 47659483 -39018065 + FLAM_A SINE Alu 1 133 0 2263 111 3 0 chr18 47660126 47660414 -39017134 - AluSx SINE Alu -23 289 1 618 156 0 0 chr18 47660421 47660517 -39017031 - FLAM_A SINE Alu -17 125 30 208 229 43 14 chr18 47660717 47660787 -39016761 + CT-rich Low_complexity Low_complexity 4 75 0 2179 135 3 0 chr18 47661317 47661621 -39015927 + AluSx SINE Alu 1 305 -7 3002 267 103 32 chr18 47662348 47664223 -39013325 + L1ME LINE L1 3 1975 -4105 1436 171 4 11 chr18 47664238 47664507 -39013041 + L1MD3 LINE L1 7729 7995 0 976 244 86 75 chr18 47664510 47665083 -39012465 + L1ME LINE L1 2018 2564 -3516 195 342 150 0 chr18 47665085 47665205 -39012343 + MIR SINE MIR 125 262 0 10352 168 34 7 chr18 47665411 47669593 -39007955 + L1PB1 LINE L1 6 4505 -2357 1927 140 49 0 chr18 47669593 47669878 -39007670 + AluSx SINE Alu 1 299 -13 10352 168 34 7 chr18 47669878 47670381 -39007167 + L1PB1 LINE L1 4505 4993 -1869 15534 36 8 2 chr18 47670382 47673005 -39004543 + L1PA4 LINE L1 3532 6151 -4 2132 230 53 31 chr18 47673047 47673713 -39003835 + L1MC4 LINE L1 7206 7885 -157 408 331 41 7 chr18 47673713 47673858 -39003690 - MIR3 SINE MIR -8 200 51 350 257 113 40 chr18 47674122 47674341 -39003207 + MIR SINE MIR 12 259 -3 5832 156 23 5 chr18 47674470 47676355 -39001193 + L1PB1 LINE L1 4946 6866 -1 2671 189 57 24 chr18 47676466 47677015 -39000533 - MLT1F1 LTR MaLR 0 567 1 539 291 69 76 chr18 47677085 47677693 -38999855 - L1MC4a LINE L1 -1864 5944 5341 518 308 91 62 chr18 47677721 47677813 -38999735 - L1MC4a LINE L1 -885 5261 5173 2163 133 0 0 chr18 47677813 47678115 -38999433 - AluSx SINE Alu -10 302 1 518 308 91 62 chr18 47678115 47678474 -38999074 - L1MC4a LINE L1 -973 5173 4797 21 71 0 0 chr18 47678617 47678659 -38998889 + AT_rich Low_complexity Low_complexity 1 42 0 351 302 146 24 chr18 47678951 47679156 -38998392 - MIR SINE MIR -13 249 20 1890 147 7 4 chr18 47680553 47681036 -38996512 + L1MA5A LINE L1 5006 5489 -743 4693 106 21 3 chr18 47681044 47681768 -38995780 + L1MA5A LINE L1 5555 6291 -6 448 302 59 85 chr18 47681947 47682288 -38995260 - L2 LINE L2 0 3272 2941 191 247 27 55 chr18 47682382 47682455 -38995093 - L2 LINE L2 -584 2730 2660 23 54 0 0 chr18 47682690 47682727 -38994821 + AT_rich Low_complexity Low_complexity 1 37 0 221 320 139 41 chr18 47682929 47683123 -38994425 - L2 LINE L2 -3 3310 3098 2322 82 0 0 chr18 47683290 47683571 -38993977 - AluY SINE Alu -14 297 17 201 325 13 13 chr18 47683596 47683673 -38993875 - L2 LINE L2 -556 2758 2682 833 174 9 4 chr18 47684330 47684567 -38992981 + GA-rich Low_complexity Low_complexity 1 238 0 531 254 43 65 chr18 47685554 47685739 -38991809 + MER5A DNA MER1_type 1 181 -8 2141 141 0 3 chr18 47686107 47686411 -38991137 - AluSx SINE Alu -8 304 2 258 235 235 0 chr18 47686435 47686520 -38991028 - MIR SINE MIR -57 151 47 344 309 114 42 chr18 47686693 47686929 -38990619 + MIR SINE MIR 6 258 -4 2406 86 0 43 chr18 47689770 47690094 -38987454 - AluSg SINE Alu 0 310 1 401 296 62 25 chr18 47690161 47690323 -38987225 - MIR3 SINE MIR -12 196 29 397 210 0 37 chr18 47690741 47690822 -38986726 + L2 LINE L2 3236 3313 0 2192 94 28 0 chr18 47690940 47691228 -38986320 - AluSq SINE Alu -17 296 1 697 248 81 10 chr18 47691316 47691514 -38986034 - MIR SINE MIR -6 256 45 183 250 21 0 chr18 47691495 47691543 -38986005 + L2 LINE L2 3254 3302 -11 * 209 194 113 32 chr18 47691539 47691601 -38985947 - MIR SINE MIR -151 111 45 183 250 21 0 chr18 47691582 47691630 -38985918 + L2 LINE L2 3254 3302 -11 * 209 194 113 32 chr18 47691626 47691688 -38985860 - MIR SINE MIR -151 111 45 * 214 218 36 0 chr18 47691669 47691724 -38985824 + L2 LINE L2 3254 3310 -3 305 289 52 0 chr18 47692397 47692494 -38985054 + MIR SINE MIR 78 179 -83 2027 147 13 0 chr18 47692502 47692809 -38984739 - AluSx SINE Alu -1 311 1 291 337 64 57 chr18 47693489 47693771 -38983777 - L2 LINE L2 -43 3229 2946 422 314 47 41 chr18 47693796 47693965 -38983583 + L2 LINE L2 3103 3272 0 269 304 30 52 chr18 47694200 47694335 -38983213 + L3 LINE CR1 788 919 -658 2879 149 84 5 chr18 47694336 47694892 -38982656 + MER51D LTR ERV1 58 657 0 206 113 57 75 chr18 47695066 47695119 -38982429 + L3b LINE CR1 1177 1228 -355 473 319 93 10 chr18 47696090 47696294 -38981254 + MIR SINE MIR 21 241 -21 198 267 208 0 chr18 47697228 47697329 -38980219 - MER5A DNA MER1_type -4 185 64 396 337 47 12 chr18 47697602 47697774 -38979774 - MIR SINE MIR -1 261 84 344 244 126 25 chr18 47698469 47698588 -38978960 - MIR SINE MIR -118 144 14 262 224 184 10 chr18 47698644 47698742 -38978806 - L2 LINE L2 -21 3251 3137 485 300 152 26 chr18 47700158 47700428 -38977120 - L2 LINE L2 -1 3312 3009 227 269 0 0 chr18 47700625 47700677 -38976871 - L2 LINE L2 -542 2772 2721 180 0 0 0 chr18 47701619 47701639 -38975909 + (TG)n Simple_repeat Simple_repeat 1 20 0 341 292 37 31 chr18 47701734 47701943 -38975605 + MIR SINE MIR 16 222 -40 4358 139 68 10 chr18 47702632 47702792 -38974756 + L1MA3 LINE L1 5446 5595 -710 2184 123 13 0 chr18 47702792 47703093 -38974455 + AluSx SINE Alu 1 305 -7 4358 139 68 10 chr18 47703093 47703745 -38973803 + L1MA3 LINE L1 5595 6305 0 236 284 69 10 chr18 47704143 47704245 -38973303 - L1MC4 LINE L1 -241 7801 7694 2293 99 20 0 chr18 47705439 47705741 -38971807 + AluSq SINE Alu 1 308 -5 1491 102 14 0 chr18 47705831 47706046 -38971502 - MER41B LTR ERV1 0 635 418 200 329 29 0 chr18 47706168 47706238 -38971310 + L3 LINE CR1 1506 1577 0 312 229 14 0 chr18 47707811 47707881 -38969667 + MER96 DNA MER1_type? 105 175 0 2100 91 17 17 chr18 47708000 47708296 -38969252 + AluSg SINE Alu 5 300 -10 227 300 29 0 chr18 47708587 47708657 -38968891 + MIR3 SINE MIR 134 205 -3 22 0 0 0 chr18 47709858 47709880 -38967668 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr18 47711475 47711499 -38966049 + (CA)n Simple_repeat Simple_repeat 2 25 0 740 221 7 127 chr18 47713620 47713772 -38963776 + MIR SINE MIR 23 118 -144 1746 160 17 20 chr18 47713772 47714065 -38963483 + AluJo SINE Alu 1 292 -20 740 221 7 127 chr18 47714065 47714195 -38963353 + MIR SINE MIR 118 262 0 197 81 0 27 chr18 47714435 47714472 -38963076 + (CCCCAG)n Simple_repeat Simple_repeat 2 37 0 3686 163 20 19 chr18 47715089 47715777 -38961771 + L1MB5 LINE L1 5486 6174 0 1236 126 0 6 chr18 47716106 47716280 -38961268 - AluSc SINE Alu -5 304 132 2150 124 0 13 chr18 47716280 47716605 -38960943 - AluSx SINE Alu 0 312 1 384 290 99 0 chr18 47717414 47717545 -38960003 - MIR SINE MIR -2 260 117 198 319 53 11 chr18 47720693 47720787 -38956761 + L2 LINE L2 2953 3050 -222 224 237 86 43 chr18 47720816 47720909 -38956639 - MIR SINE MIR -10 252 156 328 266 16 16 chr18 47720909 47721033 -38956515 - L1M LINE L1 -757 5413 5290 242 318 154 12 chr18 47721025 47721349 -38956199 - L1MEc LINE L1 -4076 2320 1951 * 319 284 52 52 chr18 47721431 47721608 -38955940 - L1MEd LINE L1 -2973 3156 2977 2460 156 26 12 chr18 47721608 47722026 -38955522 + MSTA LTR MaLR 1 424 -4 319 284 52 52 chr18 47722026 47722172 -38955376 - L1MEd LINE L1 -3151 2978 2833 370 265 66 19 chr18 47722267 47722478 -38955070 - L1MEd LINE L1 -3774 2355 2135 358 296 107 39 chr18 47722490 47722723 -38954825 - L1MEd LINE L1 -4176 2134 1886 720 287 19 42 chr18 47722816 47723011 -38954537 - L1MEd LINE L1 -4748 1562 1364 180 0 0 0 chr18 47723011 47723031 -38954517 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 720 287 19 42 chr18 47723031 47723301 -38954247 - L1MEd LINE L1 -4946 1364 1068 746 178 16 0 chr18 47723301 47723430 -38954118 - FAM SINE Alu -14 171 41 1241 266 118 67 chr18 47723438 47724460 -38953088 - L1MEd LINE L1 -5040 1079 5 311 226 32 77 chr18 47725202 47725313 -38952235 - MIR SINE MIR 0 262 158 2061 123 3 3 chr18 47725313 47725614 -38951934 - AluSx SINE Alu -11 301 1 311 226 32 77 chr18 47725614 47725657 -38951891 - MIR SINE MIR -104 158 115 859 180 73 17 chr18 47727314 47727492 -38950056 - MER5A DNA MER1_type 0 189 2 1579 152 20 96 chr18 47727519 47727862 -38949686 - AluYb8 SINE Alu -1 317 1 2454 88 0 0 chr18 47727967 47728264 -38949284 + AluY SINE Alu 1 297 -14 5022 163 30 21 chr18 47730311 47731262 -38946286 + L1MA7 LINE L1 5328 6289 -2 2172 123 0 0 chr18 47731615 47731907 -38945641 + AluSx SINE Alu 1 292 -20 226 324 57 9 chr18 47732135 47732240 -38945308 + MIR3 SINE MIR 57 166 -42 2347 99 0 0 chr18 47732423 47732725 -38944823 + AluSg SINE Alu 1 302 -8 2873 153 46 2 chr18 47733042 47733540 -38944008 + L1MC1 LINE L1 5814 6333 0 2117 137 39 39 chr18 47733596 47733960 -38943588 - THE1B LTR MaLR 0 364 1 1525 227 168 50 chr18 47734149 47734917 -38942631 + L1MEd LINE L1 347 1205 -4914 2343 95 0 7 chr18 47734966 47735271 -38942277 + AluSx SINE Alu 1 303 -9 1987 158 0 0 chr18 47735980 47736277 -38941271 - AluSx SINE Alu -15 297 1 1960 128 0 70 chr18 47736308 47736620 -38940928 + AluSx SINE Alu 1 290 -22 266 276 35 52 chr18 47736842 47736958 -38940590 + MIR3 SINE MIR 11 124 -84 286 250 115 0 chr18 47737017 47737113 -38940435 - L3 LINE CR1 -79 1498 1392 2320 105 0 3 chr18 47738556 47738862 -38938686 - AluSx SINE Alu -7 305 1 213 159 23 0 chr18 47741857 47741901 -38935647 + (TAAA)n Simple_repeat Simple_repeat 2 46 0 2434 85 3 0 chr18 47741919 47742225 -38935323 + AluSp SINE Alu 1 307 -6 827 174 0 7 chr18 47742655 47742793 -38934755 - FRAM SINE Alu -12 164 28 225 0 0 0 chr18 47742811 47742836 -38934712 + (T)n Simple_repeat Simple_repeat 1 25 0 259 109 16 141 chr18 47742965 47743029 -38934519 + MER4A LTR ERV1 302 357 -307 * 580 169 291 14 chr18 47743001 47743214 -38934334 + MER4C LTR ERV1 176 447 -18 2017 122 30 3 chr18 47744804 47745108 -38932440 + AluSx SINE Alu 1 312 0 666 268 38 53 chr18 47745443 47745708 -38931840 + MLT1K LTR MaLR 3 263 -325 603 220 95 42 chr18 47746256 47746349 -38931199 + LTR50 LTR ERVL 1 88 -707 2323 95 0 13 chr18 47746349 47746653 -38930895 - AluSx SINE Alu -12 300 1 2110 110 41 0 chr18 47746653 47746944 -38930604 - AluSx SINE Alu -8 304 1 603 220 95 42 chr18 47746944 47747017 -38930531 + LTR50 LTR ERVL 87 177 -618 1226 309 27 27 chr18 47747330 47747776 -38929772 + MER115 DNA AcHobo 3 448 -245 2221 77 0 18 chr18 47748737 47749055 -38928493 - AluY SINE Alu 0 314 2 339 278 56 35 chr18 47749982 47750047 -38927501 + LTR67 LTR ERVL 411 473 -84 2171 116 3 3 chr18 47750047 47750348 -38927200 - AluSx SINE Alu -11 301 1 339 278 56 35 chr18 47750348 47750426 -38927122 + LTR67 LTR ERVL 473 557 0 236 258 123 55 chr18 47751034 47751197 -38926351 + MLT1K LTR MaLR 143 316 -272 243 122 49 0 chr18 47751466 47751507 -38926041 + MLT1K LTR MaLR 542 584 -4 1007 190 6 0 chr18 47751937 47752111 -38925437 + FRAM SINE Alu 1 166 -10 225 277 0 0 chr18 47752116 47752181 -38925367 + A-rich Low_complexity Low_complexity 1 65 0 2184 115 30 0 chr18 47752294 47752589 -38924959 + AluSx SINE Alu 1 304 -8 233 250 192 19 chr18 47754275 47754379 -38923169 - L2 LINE L2 0 3272 3151 1075 149 48 16 chr18 47754438 47754626 -38922922 - MER20 DNA MER1_type 0 219 26 269 257 115 18 chr18 47755350 47755463 -38922085 - MLT1J LTR MaLR 0 511 388 420 319 63 10 chr18 47755480 47755687 -38921861 - MLT1L LTR MaLR -201 414 197 2322 66 10 46 chr18 47756317 47756622 -38920926 - AluY SINE Alu -17 294 1 225 260 39 29 chr18 47756676 47756780 -38920768 + L1ME LINE L1 347 451 -5965 301 377 42 38 chr18 47757094 47757383 -38920165 + L1ME LINE L1 818 1107 -5309 2285 111 0 16 chr18 47757424 47757740 -38919808 + AluSx SINE Alu 1 311 -1 856 282 182 39 chr18 47757826 47758252 -38919296 + L1ME LINE L1 1037 1401 -5206 986 159 0 28 chr18 47758252 47758428 -38919120 + FAM SINE Alu 2 172 -3 856 282 182 39 chr18 47758428 47758940 -38918608 + L1ME LINE L1 1401 2295 -4312 2057 84 84 4 chr18 47759647 47759922 -38917626 + AluSq SINE Alu 2 298 -15 292 345 151 23 chr18 47760051 47760350 -38917198 - L2 LINE L2 0 3272 2936 712 201 53 0 chr18 47760552 47760721 -38916827 - MER5A DNA MER1_type -10 179 2 21 0 0 0 chr18 47761704 47761725 -38915823 + AT_rich Low_complexity Low_complexity 1 21 0 2105 115 7 7 chr18 47763058 47763345 -38914203 + AluSx SINE Alu 5 291 -21 1190 157 6 0 chr18 47763413 47763591 -38913957 + AluSg/x SINE Alu 82 260 -52 361 171 27 41 chr18 47763602 47763748 -38913800 + GA-rich Low_complexity Low_complexity 4 147 0 571 272 12 23 chr18 47763978 47764151 -38913397 - MLT1H1 LTR MaLR -2 553 383 232 266 273 0 chr18 47764217 47764360 -38913188 + MIR SINE MIR 24 205 -57 211 288 57 68 chr18 47765296 47765427 -38912121 + MIR SINE MIR 69 199 -63 2193 138 14 35 chr18 47765427 47765659 -38911889 + THE1B LTR MaLR 4 227 -137 2536 78 0 0 chr18 47765659 47765968 -38911580 + AluSq SINE Alu 1 309 -4 2193 138 14 35 chr18 47765968 47766104 -38911444 + THE1B LTR MaLR 227 364 0 211 288 57 68 chr18 47766104 47766149 -38911399 + MIR SINE MIR 199 243 -19 215 270 180 0 chr18 47766310 47766399 -38911149 + MIR SINE MIR 98 202 -60 375 329 195 24 chr18 47766439 47767438 -38910110 + L2 LINE L2 1686 2855 -459 306 244 44 11 chr18 47768393 47768483 -38909065 - MER5A DNA MER1_type -54 135 43 211 206 93 62 chr18 47768403 47768500 -38909048 + MER5B DNA MER1_type 65 164 -14 * 180 269 51 51 chr18 47768537 47768615 -38908933 - MIR SINE MIR -69 139 62 977 267 147 37 chr18 47769103 47769320 -38908228 + MLT1J LTR MaLR 64 256 -255 872 208 89 5 chr18 47769320 47769522 -38908026 - MER20 DNA MER1_type 0 219 1 977 267 147 37 chr18 47769522 47769705 -38907843 + MLT1J LTR MaLR 256 508 -3 1825 172 37 0 chr18 47769756 47770104 -38907444 + L1PA16 LINE L1 5806 6166 0 746 253 94 10 chr18 47770270 47770624 -38906924 - L1MC4 LINE L1 -949 7046 6652 1597 188 55 59 chr18 47770624 47771047 -38906501 + MLT1C LTR MaLR 1 494 -48 243 0 0 0 chr18 47771047 47771074 -38906474 + (CA)n Simple_repeat Simple_repeat 1 27 0 * 270 0 0 0 chr18 47771073 47771103 -38906445 + (TC)n Simple_repeat Simple_repeat 2 31 0 1181 106 0 25 chr18 47771492 47771689 -38905859 + AluSg/x SINE Alu 127 319 0 1201 305 34 27 chr18 47772650 47773093 -38904455 - MER115 DNA AcHobo -245 448 3 603 220 95 42 chr18 47773405 47773478 -38904070 - LTR50 LTR ERVL -618 177 109 2150 102 41 0 chr18 47773478 47773770 -38903778 + AluSx SINE Alu 1 304 -8 2323 95 0 13 chr18 47773770 47774074 -38903474 + AluSx SINE Alu 1 300 -12 603 220 95 42 chr18 47773771 47774167 -38903381 - LTR50 LTR ERVL -686 109 1 2314 101 0 0 chr18 47775047 47775344 -38902204 + AluSx SINE Alu 3 299 -13 894 268 62 93 chr18 47775803 47776654 -38900894 + L1ME4a LINE L1 5265 6090 -31 2193 120 3 0 chr18 47776654 47776946 -38900602 - AluSp SINE Alu -20 293 1 894 268 62 93 chr18 47776946 47776978 -38900570 + L1ME4a LINE L1 6090 6121 0 210 71 0 0 chr18 47777198 47777226 -38900322 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 440 290 51 6 chr18 47777252 47777425 -38900123 + MIR3 SINE MIR 5 188 -58 2226 111 0 38 chr18 47778081 47778261 -38899287 - AluSx SINE Alu -8 304 140 2116 110 10 7 chr18 47778261 47778593 -38898955 - AluSx SINE Alu 0 312 1 2226 111 0 38 chr18 47778593 47778728 -38898820 - AluSx SINE Alu -172 140 1 1124 196 72 0 chr18 47779466 47779675 -38897873 - MER58A DNA MER1_type 0 224 1 2372 99 0 0 chr18 47781205 47781507 -38896041 + AluSx SINE Alu 1 302 -10 294 331 73 40 chr18 47783107 47783231 -38894317 + MIR SINE MIR 1 128 -80 1956 129 43 0 chr18 47783275 47783554 -38893994 + AluSx SINE Alu 6 296 -16 185 154 26 26 chr18 47783636 47783675 -38893873 + L2 LINE L2 1169 1207 -2107 297 278 56 0 chr18 47783980 47784052 -38893496 - L2 LINE L2 -48 3224 3149 1975 132 31 0 chr18 47784165 47784481 -38893067 + AluSq SINE Alu 1 313 0 347 331 135 57 chr18 47784687 47785367 -38892181 - L2 LINE L2 -363 2951 2219 1939 139 10 17 chr18 47786532 47786834 -38890714 - AluJb SINE Alu -12 300 1 804 152 48 0 chr18 47788066 47788191 -38889357 + FLAM_C SINE Alu 2 132 -11 932 219 41 27 chr18 47788209 47788428 -38889120 + MIR SINE MIR 20 241 -21 2256 79 38 0 chr18 47788832 47789123 -38888425 + AluSg SINE Alu 1 302 -8 2488 59 0 13 chr18 47790108 47790411 -38887137 + AluY SINE Alu 1 299 -12 288 0 0 0 chr18 47791754 47791786 -38885762 + (CA)n Simple_repeat Simple_repeat 1 32 0 589 220 158 24 chr18 47792771 47792980 -38884568 + MIR SINE MIR 13 249 -13 243 257 57 9 chr18 47793144 47793249 -38884299 + L1ME4a LINE L1 6012 6121 0 225 234 97 117 chr18 47793281 47793435 -38884113 - MIR3 SINE MIR -17 191 41 476 173 143 12 chr18 47794288 47794456 -38883092 - Charlie7 DNA MER1_type -11 2601 2412 1628 200 103 42 chr18 47794456 47795030 -38882518 + L1MC5 LINE L1 7309 7917 -44 286 273 18 64 chr18 47795051 47795161 -38882387 - Charlie7 DNA MER1_type -2506 106 2 493 281 128 99 chr18 47796297 47796644 -38880904 + L2 LINE L2 2764 3124 -148 2237 97 3 7 chr18 47796644 47796943 -38880605 - AluSq SINE Alu -15 298 1 493 281 128 99 chr18 47796943 47797077 -38880471 + L2 LINE L2 3124 3253 -19 236 177 16 32 chr18 47797083 47797145 -38880403 + GA-rich Low_complexity Low_complexity 4 64 0 2304 109 0 0 chr18 47798657 47798951 -38878597 + AluSg SINE Alu 1 294 -16 824 164 79 85 chr18 47799805 47799970 -38877578 + FAM SINE Alu 6 169 -16 1416 135 0 14 chr18 47799984 47800191 -38877357 - AluJo SINE Alu -23 289 86 234 0 0 0 chr18 47801040 47801066 -38876482 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 297 0 0 0 chr18 47801066 47801099 -38876449 + (CA)n Simple_repeat Simple_repeat 2 34 0 1782 141 0 40 chr18 47801117 47801275 -38876273 - AluSx SINE Alu -20 292 150 2367 72 0 23 chr18 47801275 47801580 -38875968 - AluY SINE Alu -13 298 1 1782 141 0 40 chr18 47801580 47801725 -38875823 - AluSx SINE Alu -162 150 1 252 315 14 0 chr18 47802666 47802739 -38874809 - L3 LINE CR1 -7 1570 1497 2244 125 0 10 chr18 47802794 47803107 -38874441 + AluSx SINE Alu 1 310 -2 292 307 67 40 chr18 47803288 47803438 -38874110 - MER5A DNA MER1_type 0 189 36 * 406 318 30 0 chr18 47803310 47803442 -38874106 + MER5A DNA MER1_type 34 169 -20 210 352 66 16 chr18 47804049 47804231 -38873317 - L2 LINE L2 -13 3300 3110 780 233 192 0 chr18 47804515 47804734 -38872814 - MIR SINE MIR 0 262 2 550 185 14 103 chr18 47804825 47804971 -38872577 + FLAM_A SINE Alu 1 133 0 2456 74 3 0 chr18 47804985 47805294 -38872254 + AluSp SINE Alu 1 310 -3 271 244 185 25 chr18 47805294 47805413 -38872135 + MIR SINE MIR 119 256 -6 259 377 41 8 chr18 47806957 47807079 -38870469 + MER5A DNA MER1_type 58 183 -6 270 307 154 47 chr18 47807959 47808130 -38869418 - MIR3 SINE MIR -15 193 3 1265 158 98 0 chr18 47808238 47808453 -38869095 - MER46A DNA MER2_type 0 236 1 404 210 51 116 chr18 47809469 47809503 -38868045 - MIR SINE MIR -35 227 192 2753 17 0 0 chr18 47809503 47809800 -38867748 - AluY SINE Alu -14 297 1 404 210 51 116 chr18 47809800 47809903 -38867645 - MIR SINE MIR -70 192 99 300 268 170 0 chr18 47810144 47810256 -38867292 - L2 LINE L2 0 3313 3183 2260 142 70 8 chr18 47810409 47810810 -38866738 - MSTB1 LTR MaLR 0 432 7 360 219 219 46 chr18 47810922 47811073 -38866475 - MER5B DNA MER1_type -1 177 1 193 306 188 12 chr18 47811434 47811519 -38866029 - L2 LINE L2 0 3272 3173 2165 65 0 8 chr18 47811702 47811965 -38865583 + L1PA6 LINE L1 5894 6154 0 564 241 118 46 chr18 47812843 47813038 -38864510 + MER63A DNA MER1_type 2 210 0 2067 141 7 0 chr18 47813740 47814037 -38863511 + AluSx SINE Alu 6 304 -8 264 347 21 0 chr18 47814672 47814767 -38862781 - MIR SINE MIR 0 262 166 701 160 84 0 chr18 47814767 47814886 -38862662 + FLAM_A SINE Alu 6 134 -8 613 209 37 0 chr18 47814924 47815058 -38862490 - MIR SINE MIR -123 139 1 2265 113 0 7 chr18 47815177 47815486 -38862062 + AluSx SINE Alu 1 307 -5 322 201 50 132 chr18 47816278 47816437 -38861111 + L1MC5 LINE L1 7763 7908 -53 2015 95 56 33 chr18 47816533 47816838 -38860710 + AluSx SINE Alu 1 312 0 2453 70 0 22 chr18 47817014 47817327 -38860221 - AluY SINE Alu -5 306 1 2167 201 24 95 chr18 47817348 47817582 -38859966 + L1MB8 LINE L1 5551 5800 -378 375 23 0 0 chr18 47817582 47817626 -38859922 + (CA)n Simple_repeat Simple_repeat 2 45 0 2167 201 24 95 chr18 47817626 47817900 -38859648 + L1MB8 LINE L1 5800 6002 -176 2266 83 0 60 chr18 47817900 47818214 -38859334 + AluSq SINE Alu 1 295 -18 2167 201 24 95 chr18 47818214 47818380 -38859168 + L1MB8 LINE L1 6002 6178 0 235 225 217 58 chr18 47819499 47819637 -38857911 - MER112 DNA MER1_type -83 177 18 351 358 49 8 chr18 47820170 47820293 -38857255 - MIR SINE MIR -64 144 17 206 329 0 53 chr18 47820931 47821007 -38856541 + L3 LINE CR1 1489 1560 -17 2223 118 0 3 chr18 47821539 47821843 -38855705 + AluSx SINE Alu 1 303 -9 24 32 0 0 chr18 47821843 47821874 -38855674 + AT_rich Low_complexity Low_complexity 1 31 0 1908 158 30 0 chr18 47823384 47823687 -38853861 + AluSx SINE Alu 1 312 0 2097 132 3 0 chr18 47823995 47824305 -38853243 + AluSx SINE Alu 1 311 -1 203 182 0 0 chr18 47825163 47825196 -38852352 + (TATG)n Simple_repeat Simple_repeat 3 35 0 2263 104 3 0 chr18 47825248 47825535 -38852013 + AluSq SINE Alu 1 288 -25 362 337 8 8 chr18 47825986 47826135 -38851413 - MER5A DNA MER1_type 0 189 30 2229 120 23 0 chr18 47826433 47826732 -38850816 + AluSx SINE Alu 1 306 -6 28 29 0 0 chr18 47826762 47826797 -38850751 + AT_rich Low_complexity Low_complexity 1 35 0 518 235 13 0 chr18 47827205 47827358 -38850190 + (CATATA)n Simple_repeat Simple_repeat 4 158 0 229 203 40 14 chr18 47827359 47827408 -38850140 - L1MC4 LINE L1 -1339 6703 6650 2316 91 0 0 chr18 47827408 47827694 -38849854 - AluSx SINE Alu -26 286 1 229 203 40 14 chr18 47827694 47827718 -38849830 - L1MC4 LINE L1 -1392 6650 6628 2138 138 0 3 chr18 47828166 47828471 -38849077 + AluSx SINE Alu 1 304 -8 329 244 51 90 chr18 47828661 47828817 -38848731 - MIR SINE MIR -64 198 49 2766 253 87 39 chr18 47829814 47830555 -38846993 - L2 LINE L2 0 3313 2609 455 206 71 98 chr18 47830555 47830739 -38846809 + MER104 DNA MER2_type 2 180 0 2766 253 87 39 chr18 47830739 47831492 -38846056 - L2 LINE L2 -704 2609 1765 2185 115 0 3 chr18 47831928 47832223 -38845325 + AluSx SINE Alu 1 294 -18 2179 121 3 3 chr18 47832307 47832613 -38844935 + AluSx SINE Alu 1 306 -6 200 289 0 12 chr18 47832703 47832786 -38844762 - L2 LINE L2 -1629 1685 1604 2551 48 0 0 chr18 47833626 47833921 -38843627 + AluY SINE Alu 1 295 -16 2211 122 0 0 chr18 47834459 47834755 -38842793 + AluSx SINE Alu 1 296 -16 252 167 78 78 chr18 47835262 47835352 -38842196 - MER5B DNA MER1_type -72 106 17 699 280 131 0 chr18 47836397 47836611 -38840937 + MIR SINE MIR 2 243 -19 2311 98 0 0 chr18 47837119 47837414 -38840134 + AluSc SINE Alu 1 295 -14 2267 116 0 7 chr18 47837759 47838061 -38839487 - AluSx SINE Alu -12 300 1 24 32 0 0 chr18 47839336 47839367 -38838181 + AT_rich Low_complexity Low_complexity 1 31 0 737 161 128 28 chr18 47840146 47840241 -38837307 - Tigger4(Zombi) DNA MER2_type -10 2721 2637 2556 93 3 35 chr18 47840241 47840608 -38836940 + THE1A LTR MaLR 1 355 0 737 161 128 28 chr18 47840608 47840782 -38836766 - Tigger4(Zombi) DNA MER2_type -94 2637 1 1668 155 3 23 chr18 47841447 47841750 -38835798 - AluSx SINE Alu -15 297 1 2183 111 0 3 chr18 47842883 47843172 -38834376 + AluSg SINE Alu 1 288 -22 1047 283 30 12 chr18 47843932 47844264 -38833284 + MER102b DNA MER1_type 4 341 0 2565 189 138 56 chr18 47845748 47846440 -38831108 + L1MC4a LINE L1 6897 7670 -138 2096 77 81 3 chr18 47846440 47846725 -38830823 - AluY SINE Alu -4 307 1 2565 189 138 56 chr18 47846725 47846866 -38830682 + L1MC4a LINE L1 7670 7798 -10 23 33 0 0 chr18 47846973 47847003 -38830545 + AT_rich Low_complexity Low_complexity 1 30 0 986 250 20 16 chr18 47847726 47847978 -38829570 + MER102a DNA MER1_type 78 330 0 3212 193 64 12 chr18 47848039 47848839 -38828709 + L1M4 LINE L1 4350 5190 -956 2566 82 6 0 chr18 47848851 47849179 -38828369 + LTR8 LTR ERV1 361 690 -1 1201 101 0 0 chr18 47849179 47849338 -38828210 + AluSg/x SINE Alu 128 286 -24 1972 95 7 61 chr18 47849355 47849688 -38827860 + AluSc SINE Alu 1 317 0 1994 114 7 7 chr18 47849688 47849960 -38827588 + AluSq SINE Alu 1 272 -41 731 134 54 0 chr18 47849994 47850106 -38827442 + FLAM_C SINE Alu 1 118 -15 22 0 0 0 chr18 47850108 47850130 -38827418 + AT_rich Low_complexity Low_complexity 1 22 0 733 255 7 0 chr18 47850272 47850425 -38827123 - FAM SINE Alu -17 158 5 230 320 26 0 chr18 47850650 47850728 -38826820 + L1ME4a LINE L1 5965 6044 -77 2037 213 127 21 chr18 47850900 47851570 -38825978 + L2 LINE L2 2276 3069 -244 2247 97 17 7 chr18 47851570 47851868 -38825680 + AluSq SINE Alu 1 301 -12 2037 213 127 21 chr18 47851868 47852143 -38825405 + L2 LINE L2 3069 3313 0 478 297 158 14 chr18 47853092 47853378 -38824170 - L2 LINE L2 -77 3195 2951 1778 148 7 0 chr18 47853378 47853655 -38823893 + AluSx SINE Alu 33 311 -1 478 297 158 14 chr18 47853655 47854011 -38823537 - L2 LINE L2 -321 2951 2460 243 323 73 0 chr18 47854303 47854399 -38823149 + MIR SINE MIR 30 132 -76 2059 102 53 0 chr18 47854677 47854962 -38822586 + AluSq SINE Alu 1 300 -13 2374 161 8 2 chr18 47855065 47855462 -38822086 + L1PA15 LINE L1 5767 6165 0 2249 84 3 26 chr18 47855767 47856078 -38821470 + AluSx SINE Alu 5 308 -4 2479 53 0 23 chr18 47856082 47856386 -38821162 + AluY SINE Alu 1 297 -14 246 256 67 0 chr18 47856389 47856479 -38821069 + L1MC4 LINE L1 6614 6709 -1333 213 318 147 8 chr18 47857734 47857863 -38819685 + MIR SINE MIR 114 260 -2 359 200 50 64 chr18 47858072 47858212 -38819336 + L2 LINE L2 3168 3305 -8 2367 77 13 6 chr18 47858269 47858580 -38818968 + AluSq SINE Alu 1 313 0 336 48 0 0 chr18 47858819 47858861 -38818687 + (TG)n Simple_repeat Simple_repeat 2 43 0 2021 119 3 45 chr18 47859290 47859600 -38817948 + AluSx SINE Alu 1 297 -15 2047 109 20 10 chr18 47860200 47860493 -38817055 + AluSx SINE Alu 1 296 -16 2358 82 27 0 chr18 47860817 47861110 -38816438 + AluSc SINE Alu 1 301 -8 23 33 0 0 chr18 47861173 47861203 -38816345 + AT_rich Low_complexity Low_complexity 1 30 0 2066 111 0 71 chr18 47861392 47861717 -38815831 + AluSx SINE Alu 1 302 -10 249 33 0 0 chr18 47861855 47861885 -38815663 + (A)n Simple_repeat Simple_repeat 1 30 0 189 0 0 0 chr18 47862014 47862035 -38815513 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 186 229 145 24 chr18 47862928 47863011 -38814537 + MIR SINE MIR 26 118 -90 424 185 226 34 chr18 47863295 47863441 -38814107 + MER5B DNA MER1_type 1 174 -4 205 250 0 50 chr18 47863565 47863625 -38813923 - MIR SINE MIR -81 181 125 347 228 193 35 chr18 47864140 47864285 -38813263 + MER5B DNA MER1_type 6 173 -5 562 170 163 41 chr18 47864319 47864466 -38813082 + MER5A DNA MER1_type 16 180 -9 192 275 55 55 chr18 47864844 47864935 -38812613 - MIR SINE MIR -66 196 106 352 235 210 0 chr18 47865020 47865139 -38812409 + MER5A DNA MER1_type 46 189 0 2195 120 0 0 chr18 47865256 47865547 -38812001 - AluSg1 SINE Alu -18 291 1 326 300 200 25 chr18 47865937 47866097 -38811451 - MIR3 SINE MIR -6 202 15 1637 188 0 30 chr18 47867431 47867729 -38809819 - AluJo SINE Alu -23 289 1 2240 122 0 0 chr18 47868979 47869273 -38808275 - AluSx SINE Alu -18 294 1 608 226 36 0 chr18 47869757 47869894 -38807654 - MIR3 SINE MIR -12 196 55 345 128 0 39 chr18 47869974 47870052 -38807496 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 2102 107 6 55 chr18 47870055 47870382 -38807166 - AluSx SINE Alu -1 311 1 275 169 85 0 chr18 47871560 47871619 -38805929 - MIR SINE MIR -72 136 73 24 32 0 0 chr18 47871726 47871757 -38805791 + AT_rich Low_complexity Low_complexity 1 31 0 564 200 0 0 chr18 47871960 47872065 -38805483 - MER117 DNA MER1_type -49 148 44 206 287 174 9 chr18 47872797 47872912 -38804636 + MIR3 SINE MIR 8 141 -67 631 327 96 26 chr18 47875863 47876322 -38801226 - L3 LINE CR1 -1 1576 1086 1538 96 4 22 chr18 47876587 47876853 -38800695 + AluSq SINE Alu 59 320 0 184 353 49 8 chr18 47876940 47877062 -38800486 + L2 LINE L2 3187 3313 0 622 292 83 25 chr18 47877398 47877830 -38799718 + HAL1 LINE L1 1113 1569 -938 1710 89 4 16 chr18 47878375 47878623 -38798925 - AluY SINE Alu -6 305 61 853 329 65 37 chr18 47878664 47879068 -38798480 + L1MEc LINE L1 2063 2454 -3761 2523 55 0 0 chr18 47879068 47879377 -38798171 + AluY SINE Alu 1 309 -2 853 329 65 37 chr18 47879377 47880030 -38797518 + L1MEc LINE L1 2454 3155 -3060 365 291 65 24 chr18 47880045 47880382 -38797166 + L1MEc LINE L1 3202 3552 -2663 248 272 87 10 chr18 47881194 47881297 -38796251 + L3 LINE CR1 1460 1570 -7 1096 222 28 0 chr18 47881709 47881925 -38795623 + MER58A DNA MER1_type 1 222 -2 201 162 0 0 chr18 47881926 47881963 -38795585 + (TA)n Simple_repeat Simple_repeat 2 38 0 3967 69 58 0 chr18 47882193 47882714 -38794834 + L1PA8 LINE L1 5616 6166 -6 1551 153 59 11 chr18 47883756 47884043 -38793505 + AluJb SINE Alu 1 301 -11 187 320 0 53 chr18 47885233 47885308 -38792240 - L2 LINE L2 -5 3267 3197 492 270 76 11 chr18 47885455 47885640 -38791908 + MIR SINE MIR 33 229 -33 279 333 147 0 chr18 47885804 47885933 -38791615 + L2 LINE L2 3161 3308 -5 376 272 14 41 chr18 47886761 47886917 -38790631 + L1MC4 LINE L1 7880 8042 0 1520 146 94 29 chr18 47887283 47887558 -38789990 - AluSx SINE Alu -16 296 4 383 236 224 18 chr18 47888653 47888818 -38788730 + MIR3 SINE MIR 3 201 -7 630 178 170 7 chr18 47888912 47889047 -38788501 - MER5B DNA MER1_type 0 178 22 465 191 24 0 chr18 47889846 47889930 -38787618 - MER20 DNA MER1_type -132 87 2 326 276 92 69 chr18 47890012 47890229 -38787319 + L2 LINE L2 3088 3309 -4 211 278 52 87 chr18 47891152 47891267 -38786281 + MIR SINE MIR 20 130 -132 3386 295 94 31 chr18 47891364 47893355 -38784193 + L2 LINE L2 1208 3313 0 188 286 14 14 chr18 47894137 47894207 -38783341 + MIR3 SINE MIR 130 199 -9 252 327 137 0 chr18 47894359 47894521 -38783027 + MIR SINE MIR 68 262 0 2362 79 0 0 chr18 47894597 47894900 -38782648 + AluY SINE Alu 1 303 -8 195 280 75 32 chr18 47895277 47895370 -38782178 + MIR SINE MIR 158 254 -8 345 24 0 0 chr18 47895403 47895445 -38782103 + (CA)n Simple_repeat Simple_repeat 2 43 0 1816 138 10 17 chr18 47895655 47895951 -38781597 + AluJb SINE Alu 1 294 -18 281 252 35 70 chr18 47896300 47896415 -38781133 + L2 LINE L2 3201 3311 -2 319 244 64 32 chr18 47897906 47898062 -38779486 - MIR3 SINE MIR -1 207 47 213 341 11 0 chr18 47898537 47898625 -38778923 + MIR SINE MIR 58 146 -62 392 217 67 123 chr18 47898707 47898960 -38778588 + MER112 DNA MER1_type 17 255 -5 260 269 83 104 chr18 47898974 47899102 -38778446 + MER5A DNA MER1_type 1 125 -64 2252 114 0 0 chr18 47899102 47899410 -38778138 - AluSc SINE Alu -1 308 1 260 269 83 104 chr18 47899410 47899474 -38778074 + MER5A DNA MER1_type 125 189 0 1991 125 30 3 chr18 47899543 47899847 -38777701 - AluSx SINE Alu 0 312 1 192 224 15 75 chr18 47900116 47900183 -38777365 + L2 LINE L2 3168 3230 -83 226 255 0 0 chr18 47901306 47901353 -38776195 + L2 LINE L2 3226 3272 0 719 193 43 19 chr18 47902091 47902252 -38775296 - Charlie4 DNA MER1_type 0 1961 1797 265 157 59 0 chr18 47902268 47902319 -38775229 - Charlie4 DNA MER1_type -1676 285 232 761 321 156 26 chr18 47904009 47904700 -38772848 + L2 LINE L2 469 1249 -2065 857 305 173 23 chr18 47904705 47905974 -38771574 + L2 LINE L2 1819 3308 -5 642 167 99 12 chr18 47906644 47906806 -38770742 - MER104 DNA MER2_type -1 179 4 197 138 0 0 chr18 47907678 47907707 -38769841 + L2 LINE L2 3223 3251 -21 2327 96 0 0 chr18 47908875 47909187 -38768361 - AluSq SINE Alu -1 312 1 359 341 148 19 chr18 47909375 47909700 -38767848 - L3 LINE CR1 -66 1511 1145 1915 129 7 3 chr18 47910463 47910758 -38766790 - AluSx SINE Alu -16 296 1 26 0 0 0 chr18 47911263 47911289 -38766259 + AT_rich Low_complexity Low_complexity 1 26 0 303 28 0 0 chr18 47911701 47911737 -38765811 + (TC)n Simple_repeat Simple_repeat 1 36 0 279 191 0 0 chr18 47911737 47911800 -38765748 + (CA)n Simple_repeat Simple_repeat 2 64 0 937 230 60 57 chr18 47911845 47911900 -38765648 + MIR SINE MIR 11 64 -198 1881 150 20 68 chr18 47911900 47912294 -38765254 - THE1C LTR MaLR 0 375 1 10365 111 16 41 chr18 47912294 47912477 -38765071 - THE1C-int LTR MaLR 0 1580 1394 2109 113 7 0 chr18 47912477 47912779 -38764769 + AluSx SINE Alu 1 304 -8 10365 111 16 41 chr18 47912779 47914215 -38763333 - THE1C-int LTR MaLR -186 1394 1 1740 167 31 52 chr18 47914215 47914252 -38763296 - THE1C LTR MaLR 0 375 339 2202 62 48 0 chr18 47914252 47914541 -38763007 + AluY SINE Alu 1 303 -8 1740 167 31 52 chr18 47914541 47914886 -38762662 - THE1C LTR MaLR -36 339 1 937 230 60 57 chr18 47914886 47915076 -38762472 + MIR SINE MIR 63 259 -3 294 218 0 0 chr18 47915543 47915598 -38761950 + L2 LINE L2 3258 3312 -1 819 195 47 18 chr18 47917060 47917229 -38760319 - MER5B DNA MER1_type -4 174 1 386 174 287 9 chr18 47917300 47917415 -38760133 + MER5A DNA MER1_type 33 179 -10 204 254 16 16 chr18 47918268 47918331 -38759217 + GA-rich Low_complexity Low_complexity 2 64 0 292 198 176 22 chr18 47919413 47919504 -38758044 - L2 LINE L2 -5 3308 3204 1598 205 58 3 chr18 47919620 47919947 -38757601 + MLT1F LTR MaLR 178 522 -20 272 263 138 12 chr18 47920087 47920167 -38757381 - MIR SINE MIR -3 259 170 243 79 0 0 chr18 47920802 47920840 -38756708 + (T)n Simple_repeat Simple_repeat 1 38 0 260 308 66 40 chr18 47921084 47921282 -38756266 + LTR67 LTR ERVL 352 554 -3 379 290 0 12 chr18 47921808 47921918 -38755630 + MIR3 SINE MIR 1 107 -107 732 302 128 52 chr18 47922220 47922855 -38754693 + Charlie7 DNA MER1_type 1 683 -1929 358 223 25 33 chr18 47922838 47922959 -38754589 + Charlie7 DNA MER1_type 2493 2612 0 * 313 353 0 0 chr18 47925316 47925401 -38752147 - MIR SINE MIR -2 260 176 297 291 51 0 chr18 47926295 47926374 -38751174 - MIR SINE MIR -56 152 70 1717 239 71 57 chr18 47926646 47927488 -38750060 + MER45C DNA AcHobo 1 948 -5 254 173 13 80 chr18 47927493 47927549 -38749999 + MIR SINE MIR 156 207 -55 2170 103 94 21 chr18 47927549 47927888 -38749660 + THE1B LTR MaLR 1 364 0 254 173 13 80 chr18 47927888 47927906 -38749642 + MIR SINE MIR 207 225 -37 21 0 0 0 chr18 47928466 47928487 -38749061 + AT_rich Low_complexity Low_complexity 1 21 0 253 320 20 0 chr18 47928764 47928864 -38748684 - MIR SINE MIR -73 135 34 951 189 171 0 chr18 47928905 47929133 -38748415 - ORSL DNA AcHobo -4 271 5 1066 258 36 11 chr18 47929651 47930015 -38747533 + L2 LINE L2 2478 2850 -464 2138 109 29 29 chr18 47930217 47930530 -38747018 - AluSq SINE Alu 0 313 1 942 252 30 15 chr18 47930698 47930968 -38746580 + MLT2C1 LTR ERVL 1 274 -123 293 239 184 9 chr18 47932171 47932280 -38745268 + MIR SINE MIR 135 262 0 2346 84 3 0 chr18 47934939 47935236 -38742312 - AluY SINE Alu -11 300 3 1206 155 33 5 chr18 47935239 47935452 -38742096 - MER4A LTR ERV1 -444 220 2 9331 30 2 2 chr18 47935479 47936548 -38741000 + MER11C LTR ERVK 1 1069 -2 383 349 17 11 chr18 47936879 47937054 -38740494 + MARNA DNA Mariner 61 236 -350 889 159 162 68 chr18 47937363 47937659 -38739889 - MER33 DNA MER1_type 0 324 1 891 249 116 54 chr18 47938580 47938969 -38738579 + MLT1L LTR MaLR 198 610 -5 246 267 220 13 chr18 47939077 47939227 -38738321 + L2 LINE L2 3133 3313 0 209 233 127 53 chr18 47939275 47939425 -38738123 - L2 LINE L2 -823 2491 2331 496 301 92 35 chr18 47939558 47939968 -38737580 + L2 LINE L2 2414 3039 -274 252 0 0 0 chr18 47942246 47942274 -38735274 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 1688 143 18 39 chr18 47942274 47942553 -38734995 - AluJo SINE Alu -25 287 13 332 70 0 18 chr18 47942660 47942717 -38734831 + (TTTTG)n Simple_repeat Simple_repeat 2 57 0 1927 145 0 3 chr18 47942720 47943003 -38734545 - AluJb SINE Alu -30 282 1 343 322 7 20 chr18 47944877 47945023 -38732525 + MER5B DNA MER1_type 17 160 -18 557 261 177 10 chr18 47945788 47945991 -38731557 + MIR SINE MIR 15 251 -11 2401 80 0 22 chr18 47946340 47946654 -38730894 - AluY SINE Alu -4 307 1 281 233 147 9 chr18 47947108 47947224 -38730324 + MIR SINE MIR 12 143 -119 620 289 55 61 chr18 47948245 47948556 -38728992 + L1MC/D LINE L1 5465 5773 -2035 2200 107 3 3 chr18 47948809 47949098 -38728450 - AluSc SINE Alu -20 289 1 440 286 95 71 chr18 47949211 47949704 -38727844 + HAL1 LINE L1 1153 1657 -850 2055 120 0 4 chr18 47949766 47950042 -38727506 + AluSx SINE Alu 20 294 -18 787 188 18 76 chr18 47950379 47950602 -38726946 - MIR SINE MIR -33 229 20 1093 185 10 15 chr18 47950676 47950876 -38726672 + MLT1D LTR MaLR 1 199 -306 2207 103 0 31 chr18 47951075 47951394 -38726154 + AluSg SINE Alu 1 309 -1 2254 104 0 31 chr18 47951404 47951722 -38725826 + AluSc SINE Alu 2 309 0 242 172 103 0 chr18 47951755 47951813 -38725735 - Tigger3(Golem) DNA MER2_type -816 2213 2150 267 237 41 10 chr18 47953010 47953107 -38724441 + MIR3 SINE MIR 90 189 -19 394 227 0 0 chr18 47953150 47953225 -38724323 + MER5A DNA MER1_type 1 75 -114 1857 133 11 18 chr18 47953228 47953507 -38724041 + AluJo SINE Alu 6 282 -30 594 103 0 0 chr18 47953510 47953597 -38723951 - Alu SINE Alu 0 311 225 506 202 58 0 chr18 47953642 47953746 -38723802 + MER5A DNA MER1_type 80 189 0 199 306 46 46 chr18 47954234 47954342 -38723206 - MIR3 SINE MIR -90 118 11 860 201 77 0 chr18 47956183 47956377 -38721171 + MER3 DNA MER1_type 1 209 0 545 215 86 18 chr18 47956783 47956946 -38720602 - MER5A DNA MER1_type 0 189 5 681 213 7 0 chr18 47958684 47958834 -38718714 + MER5A DNA MER1_type 39 189 0 487 261 0 0 chr18 47958842 47958957 -38718591 + MER5B DNA MER1_type 2 116 -62 362 80 0 18 chr18 47958977 47959034 -38718514 + L1P4 LINE L1 5664 5714 -452 489 147 0 0 chr18 47959225 47959320 -38718228 + (TCC)n Simple_repeat Simple_repeat 2 96 0 745 171 0 23 chr18 47959349 47959478 -38718070 - FRAM SINE Alu -58 118 1 639 172 52 8 chr18 47959478 47959612 -38717936 - L1MB3 LINE L1 -57 6126 5987 2361 119 3 0 chr18 47960000 47960336 -38717212 - MER1B DNA MER1_type 0 337 1 2315 168 25 10 chr18 47960813 47961218 -38716330 - L1PA16 LINE L1 -22 6144 5734 24 67 0 0 chr18 47964236 47964281 -38713267 + AT_rich Low_complexity Low_complexity 1 45 0 694 224 0 0 chr18 47967403 47967548 -38710000 - FLAM_C SINE Alu 0 145 1 316 245 20 31 chr18 47968192 47968290 -38709258 - MIR3 SINE MIR -3 205 109 343 184 23 0 chr18 47970639 47970726 -38706822 + (TA)n Simple_repeat Simple_repeat 2 90 0 319 253 22 11 chr18 47970727 47970818 -38706730 + L1MC4 LINE L1 6614 6705 -1337 25 0 0 0 chr18 47970818 47970843 -38706705 + AT_rich Low_complexity Low_complexity 1 25 0 344 167 30 0 chr18 47971354 47971420 -38706128 - MIR SINE MIR -108 154 87 455 288 39 7 chr18 47971767 47971920 -38705628 + MIR SINE MIR 25 182 -80 436 234 75 75 chr18 47973637 47973825 -38703723 + MER91B DNA MER1_type 3 190 0 22 35 0 0 chr18 47973828 47973857 -38703691 + AT_rich Low_complexity Low_complexity 1 29 0 2305 123 3 0 chr18 47973881 47974191 -38703357 - AluSx SINE Alu 0 312 2 458 141 0 0 chr18 47974203 47974274 -38703274 - tRNA-Glu-GAG tRNA tRNA -3 72 2 695 164 0 0 chr18 47976552 47976662 -38700886 - AluJo SINE Alu -181 131 22 716 189 92 12 chr18 47977571 47977735 -38699813 - MER5B DNA MER1_type 0 178 2 202 279 123 39 chr18 47977788 47977956 -38699592 + MIR SINE MIR 27 198 -28 422 167 31 10 chr18 47978186 47978282 -38699266 + MER5A DNA MER1_type 9 106 -83 317 298 73 33 chr18 47979204 47979355 -38698193 + L2 LINE L2 3116 3272 0 2178 107 27 3 chr18 47981174 47981472 -38696076 + AluSx SINE Alu 1 305 -7 2049 240 100 24 chr18 47982143 47982251 -38695297 + L1ME3A LINE L1 5480 5578 -592 1907 112 56 33 chr18 47982251 47982555 -38694993 + AluSx SINE Alu 1 311 -1 2049 240 100 24 chr18 47982555 47983089 -38694459 + L1ME3A LINE L1 5578 6169 -1 210 287 70 28 chr18 47983118 47983261 -38694287 - L2 LINE L2 -952 2362 2214 2378 181 22 17 chr18 47984641 47985100 -38692448 + LOR1b LTR ERV1 1 461 0 660 177 14 34 chr18 47985387 47985534 -38692014 + L1ME3A LINE L1 6027 6170 0 572 170 0 7 chr18 47986160 47986301 -38691247 + (CCA)n Simple_repeat Simple_repeat 1 140 0 420 113 0 0 chr18 47986409 47986480 -38691068 + Alu SINE Alu 238 308 -4 1819 130 171 9 chr18 47986481 47986820 -38690728 - MSTA LTR MaLR -34 394 1 1496 193 3 50 chr18 47987103 47987404 -38690144 - AluJo SINE Alu -16 296 10 607 168 0 0 chr18 47987412 47987519 -38690029 - L1 LINE L1 -2458 3688 3582 494 266 9 0 chr18 47988110 47988223 -38689325 + FLAM_C SINE Alu 5 118 -25 293 355 30 6 chr18 47988329 47988498 -38689050 + L1ME1 LINE L1 5450 5622 -2186 678 60 12 0 chr18 47989963 47990047 -38687501 - AluSq/x SINE Alu -190 123 39 562 198 0 0 chr18 47990046 47990142 -38687406 - FLAM_A SINE Alu -26 116 21 * 256 250 0 45 chr18 47990180 47990268 -38687280 + L1ME1 LINE L1 3492 3575 -2571 1762 238 57 15 chr18 47990452 47990911 -38686637 + L1ME1 LINE L1 5408 5885 -281 1007 222 30 21 chr18 47992089 47992323 -38685225 + AluJo SINE Alu 1 236 -76 9958 34 4 2 chr18 47992424 47993605 -38683943 + L1P LINE L1 3885 5068 -1078 336 247 0 0 chr18 47994834 47994923 -38682625 + MIR SINE MIR 166 254 -8 210 37 0 0 chr18 47995139 47995166 -38682382 + (T)n Simple_repeat Simple_repeat 1 27 0 224 295 0 53 chr18 47995447 47995542 -38682006 + MIR SINE MIR 40 129 -79 1347 160 56 20 chr18 47995996 47996282 -38681266 - L1MA9 LINE L1 -210 6081 5791 261 83 0 0 chr18 47996282 47996318 -38681230 + (CA)n Simple_repeat Simple_repeat 1 36 0 1347 160 56 20 chr18 47996318 47996345 -38681203 - L1MA9 LINE L1 -500 5791 5766 722 255 68 0 chr18 47996367 47996528 -38681020 - AluJo SINE Alu -54 258 87 1956 127 7 0 chr18 47996528 47996803 -38680745 - AluSg SINE Alu -33 277 1 1359 188 8 0 chr18 47996804 47997059 -38680489 - L1MA9 LINE L1 -585 5727 5471 232 143 0 0 chr18 47997175 47997210 -38680338 + MER41A LTR ERV1 518 552 -2 348 292 43 38 chr18 47997214 47997423 -38680125 + L1ME1 LINE L1 5843 6052 -114 936 230 14 19 chr18 47997522 47997735 -38679813 + MER58C DNA MER1_type 4 215 0 2356 145 41 9 chr18 47997812 47998229 -38679319 - LTR10A LTR ERV1 0 547 79 192 281 144 22 chr18 47998346 47998485 -38679063 + L2 LINE L2 2363 2518 -796 213 280 90 20 chr18 48000007 48000107 -38677441 + MIR3 SINE MIR 4 110 -98 * 249 277 232 0 chr18 48000092 48000204 -38677344 + MIR SINE MIR 119 256 -6 1379 191 112 25 chr18 48000667 48000981 -38676567 - MLT1D LTR MaLR -1 504 164 2355 102 0 3 chr18 48003164 48003467 -38674081 - AluSx SINE Alu -10 302 1 2060 128 10 10 chr18 48003470 48003782 -38673766 - AluSq SINE Alu 0 313 2 582 267 37 28 chr18 48003882 48004158 -38673390 - HERVH LTR ERV1 -4148 2528 1338 374 244 133 99 chr18 48004611 48004870 -38672678 + L1M4 LINE L1 2678 2952 -3194 2052 102 3 32 chr18 48004870 48005155 -38672393 + AluSc SINE Alu 1 277 -32 374 244 133 99 chr18 48005155 48005227 -38672321 + L1M4 LINE L1 2952 3020 -3126 274 274 64 34 chr18 48005261 48005482 -38672066 + MER46C DNA MER2_type 68 331 -7 13942 26 1 0 chr18 48005599 48007203 -38670345 - L1P LINE L1 -1065 5081 3477 394 340 64 40 chr18 48007335 48007632 -38669916 - L2 LINE L2 -8 3264 2961 429 36 0 0 chr18 48007683 48007738 -38669810 + (TG)n Simple_repeat Simple_repeat 1 55 0 1372 211 65 8 chr18 48010924 48011294 -38666254 - L1M4 LINE L1 -930 5216 4826 711 132 28 104 chr18 48011350 48011532 -38666016 - L1MA9 LINE L1 0 6312 6145 737 255 133 34 chr18 48011534 48012131 -38665417 - HAL1 LINE L1 -1725 782 94 306 237 44 44 chr18 48012588 48012702 -38664846 - L1M4 LINE L1 -754 5430 5317 561 269 183 27 chr18 48013285 48013847 -38663701 - L1ME4a LINE L1 -151 5970 5321 22 56 0 0 chr18 48014025 48014061 -38663487 + AT_rich Low_complexity Low_complexity 1 36 0 682 168 0 0 chr18 48014487 48014606 -38662942 + AluSg/x SINE Alu 183 301 -11 3828 175 21 61 chr18 48014606 48015747 -38661801 + L1M1 LINE L1 3179 4259 -3306 2121 119 20 0 chr18 48015747 48016040 -38661508 + AluSx SINE Alu 1 299 -13 3828 175 21 61 chr18 48016040 48016226 -38661322 + L1M1 LINE L1 4259 4451 -3114 2237 110 0 16 chr18 48017247 48017564 -38659984 - AluSx SINE Alu 0 312 1 219 36 0 0 chr18 48017742 48017770 -38659778 + (TG)n Simple_repeat Simple_repeat 1 28 0 932 102 8 0 chr18 48018934 48019062 -38658486 + AluY SINE Alu 1 129 -182 212 0 0 35 chr18 48019064 48019093 -38658455 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 2201 111 0 3 chr18 48020075 48020381 -38657167 - AluSx SINE Alu -7 305 1 213 39 0 0 chr18 48020383 48020409 -38657139 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2368 54 17 10 chr18 48020563 48020861 -38656687 - AluSq SINE Alu -13 300 1 33 56 0 14 chr18 48021254 48021273 -38656275 + AT_rich Low_complexity Low_complexity 1 19 -52 1962 137 47 0 chr18 48021273 48021551 -38655997 - AluJb SINE Alu -21 291 1 33 56 0 14 chr18 48021551 48021603 -38655945 + AT_rich Low_complexity Low_complexity 19 71 0 2206 101 7 17 chr18 48021707 48021844 -38655704 + AluSx SINE Alu 1 138 -174 2291 101 0 10 chr18 48021844 48022152 -38655396 + AluSg SINE Alu 1 305 -5 2206 101 7 17 chr18 48022152 48022312 -38655236 + AluSx SINE Alu 138 295 -17 279 79 0 0 chr18 48022425 48022463 -38655085 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 941 114 0 0 chr18 48022579 48022711 -38654837 - AluYb8 SINE Alu -186 132 1 180 0 0 0 chr18 48022713 48022733 -38654815 + (T)n Simple_repeat Simple_repeat 1 20 0 2346 76 36 0 chr18 48023122 48023424 -38654124 - AluSp SINE Alu 0 313 1 2475 92 0 0 chr18 48023659 48023965 -38653583 - AluSq SINE Alu -7 306 1 731 128 121 43 chr18 48024049 48024190 -38653358 + FRAM SINE Alu 2 153 -13 1128 219 13 17 chr18 48024970 48025207 -38652341 - MER57-int LTR ERV1 -1852 5685 5450 470 222 130 0 chr18 48025225 48025333 -38652215 - FLAM_C SINE Alu -20 123 2 2594 186 22 84 chr18 48025334 48025704 -38651844 - MER57-int LTR ERV1 -2077 5460 5069 1334 38 0 0 chr18 48025704 48025863 -38651685 - L1PA2 LINE L1 0 6155 5997 2594 186 22 84 chr18 48025863 48026136 -38651412 - MER57-int LTR ERV1 -2468 5069 4860 1666 106 5 0 chr18 48026136 48026353 -38651195 + AluSg/x SINE Alu 79 296 -14 2594 186 22 84 chr18 48026353 48026402 -38651146 - MER57-int LTR ERV1 -2677 4860 4810 2261 103 3 0 chr18 48026404 48026704 -38650844 - AluSp SINE Alu -12 301 1 1225 275 98 8 chr18 48026966 48027352 -38650196 + MLT1F1 LTR MaLR 147 567 0 318 207 85 24 chr18 48027577 48027659 -38649889 - L2 LINE L2 0 3313 3227 648 140 0 0 chr18 48027713 48027806 -38649742 + HY4 scRNA scRNA 1 93 0 684 256 116 24 chr18 48027838 48028140 -38649408 + L1ME LINE L1 5320 5664 -457 2116 119 3 0 chr18 48028140 48028434 -38649114 - AluSx SINE Alu -17 295 1 684 256 116 24 chr18 48028434 48028502 -38649046 + L1ME LINE L1 5664 5724 -397 2473 50 0 0 chr18 48028727 48029027 -38648521 + AluY SINE Alu 1 300 -11 939 266 50 6 chr18 48029068 48029388 -38648160 - L1MC4a LINE L1 -1911 5897 5564 2180 95 0 7 chr18 48029392 48029696 -38647852 - AluSx SINE Alu -10 302 1 228 266 32 21 chr18 48029781 48029875 -38647673 + L1ME LINE L1 5831 5925 -196 21 36 0 0 chr18 48029940 48029968 -38647580 + AT_rich Low_complexity Low_complexity 1 28 0 2111 140 82 55 chr18 48030001 48030212 -38647336 - MSTC LTR MaLR 0 428 224 1997 121 10 7 chr18 48030212 48030519 -38647029 - AluSx SINE Alu -4 308 1 2111 140 82 55 chr18 48030519 48030722 -38646826 - MSTC LTR MaLR -204 224 3 282 286 11 44 chr18 48031581 48031672 -38645876 + MIR SINE MIR 40 127 -81 355 100 0 0 chr18 48031720 48031770 -38645778 - MADE1 DNA Mariner -29 51 2 1758 149 0 29 chr18 48033997 48034306 -38643242 + AluJo SINE Alu 4 303 -9 809 249 79 18 chr18 48034635 48034864 -38642684 + MIR SINE MIR 20 262 0 294 125 18 54 chr18 48035229 48035285 -38642263 + FRAM/FAM SINE Alu 1 53 -113 285 83 0 0 chr18 48035275 48035311 -38642237 + FLAM SINE Alu 87 122 -11 * 492 192 0 13 chr18 48036007 48036085 -38641463 + MER2 DNA MER2_type 1 77 -268 717 160 0 23 chr18 48036085 48036216 -38641332 - FLAM_C SINE Alu -2 141 14 2240 80 0 3 chr18 48036216 48036505 -38641043 + AluY SINE Alu 1 288 -23 910 180 164 29 chr18 48036529 48036773 -38640775 + MER2 DNA MER2_type 69 345 0 1065 188 80 108 chr18 48036929 48037291 -38640257 - MER57A LTR ERV1 -4 399 48 2428 50 0 3 chr18 48037293 48037593 -38639955 - AluY SINE Alu -12 299 1 2272 54 17 7 chr18 48037769 48038066 -38639482 - AluSq SINE Alu -13 300 1 33 56 0 14 chr18 48038459 48038478 -38639070 + AT_rich Low_complexity Low_complexity 1 19 -52 1843 137 47 0 chr18 48038478 48038756 -38638792 - AluJb SINE Alu -21 291 1 33 56 0 14 chr18 48038756 48038808 -38638740 + AT_rich Low_complexity Low_complexity 19 71 0 1264 116 0 16 chr18 48038912 48039101 -38638447 + AluSx SINE Alu 1 186 -126 2040 114 0 24 chr18 48039217 48039514 -38638034 - AluSx SINE Alu -19 293 4 641 163 23 70 chr18 48039516 48039645 -38637903 + AluSg/x SINE Alu 65 187 -125 367 138 0 113 chr18 48039646 48039726 -38637822 + AluJ/FRAM SINE Alu 229 299 -3 929 248 60 63 chr18 48039759 48040061 -38637487 + MLT1E LTR MaLR 138 438 -155 1845 142 0 10 chr18 48040063 48040366 -38637182 - AluSx SINE Alu -12 300 1 2121 91 16 7 chr18 48040452 48040759 -38636789 + AluY SINE Alu 1 310 -1 2004 136 0 3 chr18 48040820 48041129 -38636419 + AluSg SINE Alu 1 308 -2 1642 182 0 7 chr18 48041209 48041506 -38636042 + AluJb SINE Alu 1 295 -17 1989 100 3 23 chr18 48041749 48042059 -38635489 + AluSx SINE Alu 1 304 -8 752 182 0 30 chr18 48043193 48043325 -38634223 + AluSq/x SINE Alu 2 129 -183 331 130 0 0 chr18 48043325 48043379 -38634169 + Alu SINE Alu 248 301 0 1642 153 25 0 chr18 48043405 48043680 -38633868 + AluJo SINE Alu 1 282 -30 1967 121 3 16 chr18 48043701 48044016 -38633532 + AluY SINE Alu 1 311 0 489 223 69 45 chr18 48044755 48044957 -38632591 + L1MC5 LINE L1 7723 7929 -32 2263 81 3 3 chr18 48045659 48045956 -38631592 + AluSp SINE Alu 1 297 -16 4429 163 16 39 chr18 48046371 48047309 -38630239 + LTR5 LTR ERVK 1 916 -53 243 250 0 0 chr18 48047373 48047429 -38630119 - tRNA-Lys-AAG tRNA tRNA 0 76 21 286 184 0 0 chr18 48048776 48048825 -38628723 + MER3 DNA MER1_type 42 90 -119 * 736 188 109 0 chr18 48048788 48048953 -38628595 - MER3 DNA MER1_type -6 203 21 1943 103 7 24 chr18 48049984 48050334 -38627214 + AluSp SINE Alu 1 345 0 1555 148 14 43 chr18 48050423 48050700 -38626848 + AluSx SINE Alu 7 275 -37 26 0 0 0 chr18 48050711 48050737 -38626811 + AT_rich Low_complexity Low_complexity 1 26 0 1962 129 3 3 chr18 48050965 48051274 -38626274 + AluSx SINE Alu 1 309 -3 1672 153 22 29 chr18 48051354 48051668 -38625880 + AluSx SINE Alu 1 312 0 1617 130 39 4 chr18 48051669 48051923 -38625625 + AluSx SINE Alu 28 290 -22 2103 118 0 0 chr18 48051926 48052231 -38625317 + AluSx SINE Alu 1 305 -7 348 94 0 0 chr18 48052259 48052312 -38625236 + (CA)n Simple_repeat Simple_repeat 2 54 0 2087 113 3 3 chr18 48052492 48052792 -38624756 + AluSc SINE Alu 6 305 -4 1464 102 35 9 chr18 48053491 48053717 -38623831 - AluSx SINE Alu -80 232 1 1314 136 0 32 chr18 48053719 48053940 -38623608 - AluJb SINE Alu -14 298 85 2090 124 0 0 chr18 48053992 48054290 -38623258 - AluSx SINE Alu -14 298 1 982 84 0 0 chr18 48054320 48054451 -38623097 + AluSq/x SINE Alu 1 131 -181 1838 101 39 11 chr18 48054491 48054777 -38622771 - AluY SINE Alu -16 295 2 1629 177 0 7 chr18 48054977 48055265 -38622283 - AluJb SINE Alu -22 290 5 246 289 8 83 chr18 48055393 48055514 -38622034 - MIR SINE MIR -120 142 31 234 0 0 0 chr18 48055579 48055605 -38621943 + (CA)n Simple_repeat Simple_repeat 2 27 0 24 32 0 0 chr18 48055608 48055639 -38621909 + AT_rich Low_complexity Low_complexity 1 31 0 283 267 17 0 chr18 48055940 48056000 -38621548 - L2 LINE L2 -1 3271 3211 669 223 38 6 chr18 48056017 48056174 -38621374 + MLT1J LTR MaLR 350 511 0 426 121 0 0 chr18 48056206 48056272 -38621276 + (T)n Simple_repeat Simple_repeat 1 66 0 180 0 0 0 chr18 48056298 48056318 -38621230 + (G)n Simple_repeat Simple_repeat 1 20 0 213 39 0 0 chr18 48056597 48056623 -38620925 + (CAA)n Simple_repeat Simple_repeat 2 27 0 2079 111 0 3 chr18 48056625 48056931 -38620617 + AluSx SINE Alu 1 305 -7 293 233 130 68 chr18 48058653 48058799 -38618749 + MER5A DNA MER1_type 28 182 -7 1064 96 45 0 chr18 48058876 48059033 -38618515 + L1PA10 LINE L1 6005 6168 0 968 154 87 98 chr18 48059365 48059651 -38617897 - AluJo SINE Alu 0 312 30 2294 92 0 3 chr18 48059893 48060207 -38617341 + AluSq SINE Alu 1 313 0 767 151 43 0 chr18 48060229 48060368 -38617180 - MER65C LTR ERV1 0 461 317 785 235 6 11 chr18 48060379 48060558 -38616990 + FRAM SINE Alu 1 170 -6 1566 151 32 55 chr18 48060559 48060715 -38616833 - MER65C LTR ERV1 -157 304 157 2204 100 3 0 chr18 48060715 48061016 -38616532 + AluSx SINE Alu 1 302 -10 1566 151 32 55 chr18 48061016 48061170 -38616378 - MER65C LTR ERV1 -304 157 1 1735 112 7 72 chr18 48061207 48061534 -38616014 + AluSx SINE Alu 1 307 0 1522 173 72 14 chr18 48061539 48061817 -38615731 + AluSx SINE Alu 2 295 -7 2256 71 3 3 chr18 48061817 48062113 -38615435 + AluY SINE Alu 1 296 -15 2028 132 0 0 chr18 48062244 48062548 -38615000 - AluSx SINE Alu -8 304 1 1856 156 7 3 chr18 48062589 48062897 -38614651 + AluJo SINE Alu 1 309 -3 1668 154 3 33 chr18 48062944 48063250 -38614298 + AluSx SINE Alu 1 297 -15 1914 91 39 49 chr18 48063250 48063558 -38613990 + AluSx SINE Alu 1 305 -7 578 107 24 0 chr18 48063666 48063750 -38613798 - AluS SINE Alu -224 89 4 641 163 23 70 chr18 48063752 48063881 -38613667 + AluSg/x SINE Alu 65 187 -125 397 139 0 101 chr18 48063882 48063961 -38613587 + AluJ/FRAM SINE Alu 229 299 -3 1542 216 72 76 chr18 48063994 48064298 -38613250 + MLT1E LTR MaLR 138 441 -152 2326 67 0 3 chr18 48064298 48064596 -38612952 - AluY SINE Alu -12 299 3 1542 216 72 76 chr18 48064596 48064749 -38612799 + MLT1E LTR MaLR 441 593 0 1746 147 7 20 chr18 48064750 48065050 -38612498 + AluJo SINE Alu 1 296 -16 662 147 47 6 chr18 48065050 48065220 -38612328 + GA-rich Low_complexity Low_complexity 1 177 0 356 277 9 0 chr18 48065242 48065354 -38612194 + L1ME LINE L1 1530 1642 -4754 * 733 262 25 18 chr18 48065351 48065415 -38612133 + L1ME LINE L1 5176 5238 -993 2064 112 0 29 chr18 48065415 48065729 -38611819 + AluSx SINE Alu 1 305 -7 733 262 25 18 chr18 48065729 48066018 -38611530 + L1ME LINE L1 5238 5527 -704 1653 131 41 17 chr18 48066032 48066322 -38611226 - AluY SINE Alu -14 297 1 198 0 0 0 chr18 48066322 48066344 -38611204 + (T)n Simple_repeat Simple_repeat 1 22 0 203 171 0 0 chr18 48066719 48066760 -38610788 + T-rich Low_complexity Low_complexity 1 41 0 271 116 0 0 chr18 48066860 48066903 -38610645 + Alu SINE Alu 263 305 -3 898 191 48 67 chr18 48066906 48067116 -38610432 - AluJo SINE Alu -98 214 9 653 240 8 0 chr18 48067124 48067249 -38610299 - MLT1E LTR MaLR -467 126 1 2081 101 7 0 chr18 48067349 48067637 -38609911 - AluSq SINE Alu -23 290 1 487 298 31 16 chr18 48067638 48067939 -38609609 - L1M4c LINE L1 -4910 1474 1183 2303 64 6 19 chr18 48067979 48068290 -38609258 - AluY SINE Alu -4 307 1 872 137 0 20 chr18 48068296 48068442 -38609106 - FLAM_C SINE Alu 0 143 1 2127 107 0 17 chr18 48068611 48068911 -38608637 - AluSc SINE Alu -14 295 1 1374 178 110 0 chr18 48069059 48069340 -38608208 - AluJo SINE Alu 0 312 1 527 29 14 0 chr18 48069412 48069481 -38608067 + (TCTA)n Simple_repeat Simple_repeat 2 71 0 1732 161 0 0 chr18 48069675 48069954 -38607594 + AluJb SINE Alu 1 279 -33 414 0 0 0 chr18 48069954 48070000 -38607548 + (CA)n Simple_repeat Simple_repeat 1 46 0 242 324 0 14 chr18 48070124 48070195 -38607353 - LTR38 LTR ERV1 -362 194 125 359 230 0 60 chr18 48070298 48070398 -38607150 - LTR38B LTR ERV1 -495 115 22 1462 199 3 10 chr18 48070398 48070690 -38606858 + AluJb SINE Alu 1 290 -22 2157 102 3 0 chr18 48070701 48070996 -38606552 + AluSg SINE Alu 1 296 -14 2120 89 4 4 chr18 48071007 48071287 -38606261 + AluSp SINE Alu 7 286 -27 943 112 47 35 chr18 48071297 48071467 -38606081 + L1MA3 LINE L1 6132 6303 -2 2378 161 46 5 chr18 48071483 48071899 -38605649 + MER67B LTR ERV1 143 575 -86 287 179 0 18 chr18 48072177 48072233 -38605315 + MER67B LTR ERV1 607 661 0 923 251 110 146 chr18 48072268 48072830 -38604718 - MLT1G LTR MaLR 0 590 54 39 22 0 0 chr18 48072978 48073024 -38604524 + AT_rich Low_complexity Low_complexity 1 46 0 1779 157 0 10 chr18 48073062 48073355 -38604193 - AluJb SINE Alu -20 292 3 475 237 26 9 chr18 48073479 48073593 -38603955 - L2 LINE L2 -1 3312 3197 2064 107 0 3 chr18 48074076 48074374 -38603174 + AluSx SINE Alu 16 312 0 1371 170 58 0 chr18 48074501 48074760 -38602788 - AluJb SINE Alu -2 310 37 2156 104 10 0 chr18 48075363 48075662 -38601886 + AluSg SINE Alu 1 302 -8 181 313 21 0 chr18 48075706 48075754 -38601794 + MIR SINE MIR 210 258 -4 741 203 176 78 chr18 48075755 48076051 -38601497 + MER46C DNA MER2_type 3 327 -11 2117 103 0 0 chr18 48076156 48076460 -38601088 - AluSg SINE Alu 0 304 1 976 112 0 0 chr18 48076462 48076596 -38600952 - AluSg/x SINE Alu -16 294 161 1524 209 60 121 chr18 48076596 48077226 -38600322 + MLT1E1 LTR MaLR 63 654 0 293 333 9 26 chr18 48077226 48077340 -38600208 + MIR3 SINE MIR 92 203 -5 1139 100 14 7 chr18 48079035 48079244 -38598304 - AluSq SINE Alu -25 288 33 186 289 60 0 chr18 48079244 48079327 -38598221 + MIR3 SINE MIR 114 201 -7 2022 150 0 3 chr18 48080070 48080376 -38597172 - AluSx SINE Alu -7 305 1 460 69 0 0 chr18 48080376 48080434 -38597114 - AluSq SINE Alu -177 135 78 1247 148 175 12 chr18 48081150 48081407 -38596141 - AluSg SINE Alu -1 299 1 200 194 0 0 chr18 48081539 48081575 -38595973 - L3b LINE CR1 -255 1328 1293 360 282 13 45 chr18 48082038 48082194 -38595354 - LTR16C LTR ERVL -2 489 339 2553 144 48 65 chr18 48082574 48082883 -38594665 - LTR26B LTR ERV1 -19 512 214 1978 91 0 23 chr18 48082883 48083148 -38594400 + AluSx SINE Alu 1 259 -53 2553 144 48 65 chr18 48083148 48083359 -38594189 - LTR26B LTR ERV1 -317 214 1 899 179 31 6 chr18 48084162 48084324 -38593224 - FRAM SINE Alu 0 166 1 1013 158 0 0 chr18 48084393 48084539 -38593009 + AluSg/x SINE Alu 131 276 -36 46 0 0 0 chr18 48084539 48084585 -38592963 + AT_rich Low_complexity Low_complexity 1 46 0 1695 127 0 0 chr18 48084743 48084972 -38592576 + AluSx SINE Alu 1 229 -83 476 154 51 0 chr18 48084995 48085104 -38592444 + AluJb SINE Alu 204 316 0 604 212 9 0 chr18 48085546 48085659 -38591889 - AluJb SINE Alu -8 304 191 2168 84 14 11 chr18 48085781 48086067 -38591481 - AluSq SINE Alu -26 287 1 364 278 103 0 chr18 48087145 48087271 -38590277 - MIR3 SINE MIR -3 205 67 2352 85 0 3 chr18 48087545 48087838 -38589710 + AluSg SINE Alu 1 292 -18 396 59 0 0 chr18 48089461 48089512 -38588036 + (TG)n Simple_repeat Simple_repeat 2 52 0 2056 113 11 3 chr18 48089521 48089804 -38587744 - AluSx SINE Alu -27 285 1 670 49 0 0 chr18 48090113 48090195 -38587353 + AluY SINE Alu 2 83 -227 189 0 0 0 chr18 48090291 48090312 -38587236 + (A)n Simple_repeat Simple_repeat 1 21 0 2346 76 36 0 chr18 48090547 48090849 -38586699 + AluSp SINE Alu 1 313 0 883 282 52 26 chr18 48091061 48091192 -38586356 - L1ME3A LINE L1 -4 6166 6040 2414 86 10 0 chr18 48091192 48091495 -38586053 - AluSx SINE Alu -6 306 1 883 282 52 26 chr18 48091495 48091711 -38585837 - L1ME3A LINE L1 -130 6040 5810 804 236 5 26 chr18 48091740 48091935 -38585613 + MER20 DNA MER1_type 12 202 -17 1036 237 69 15 chr18 48091957 48092231 -38585317 - L1ME3A LINE L1 -387 5775 5487 2077 113 42 3 chr18 48092249 48092533 -38585015 + AluSx SINE Alu 1 295 -17 1113 126 0 47 chr18 48092633 48092823 -38584725 - AluSq SINE Alu -132 181 1 359 318 50 6 chr18 48092824 48093003 -38584545 - L2 LINE L2 -1896 1418 1232 2326 96 7 0 chr18 48093086 48093378 -38584170 + AluSx SINE Alu 1 294 -18 396 59 0 0 chr18 48094993 48095044 -38582504 + (TG)n Simple_repeat Simple_repeat 2 52 0 2091 113 11 0 chr18 48095053 48095335 -38582213 - AluSx SINE Alu -27 285 1 2626 49 3 0 chr18 48095643 48095950 -38581598 + AluY SINE Alu 1 308 -3 2163 116 7 0 chr18 48096187 48096480 -38581068 + AluSx SINE Alu 1 295 -17 198 0 0 0 chr18 48096480 48096502 -38581046 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 384 213 14 55 chr18 48096503 48096665 -38580883 - L1ME1 LINE L1 -18 6148 6003 25 51 0 0 chr18 48096689 48096728 -38580820 + AT_rich Low_complexity Low_complexity 1 39 0 764 161 7 36 chr18 48097320 48097457 -38580091 - FLAM_A SINE Alu 0 133 1 769 227 28 23 chr18 48097557 48097733 -38579815 - L1M4c LINE L1 -2001 4381 4205 607 171 98 8 chr18 48097768 48097891 -38579657 - AluSg SINE Alu -175 135 2 1657 240 20 18 chr18 48097894 48098177 -38579371 - L1M4c LINE L1 -3004 3378 3092 1455 133 184 45 chr18 48098177 48098244 -38579304 - MSTA LTR MaLR 0 428 372 2512 78 0 0 chr18 48098244 48098553 -38578995 + AluY SINE Alu 1 309 -2 1455 133 184 45 chr18 48098553 48098861 -38578687 - MSTA LTR MaLR -56 372 1 1657 240 20 18 chr18 48098861 48099065 -38578483 - L1M4c LINE L1 -3290 3092 2890 1922 164 0 7 chr18 48099065 48099375 -38578173 - AluSg SINE Alu -2 308 1 369 301 59 8 chr18 48099403 48099650 -38577898 - L1M4c LINE L1 -4548 2015 1643 933 172 6 0 chr18 48099760 48099917 -38577631 + MER5A DNA MER1_type 32 189 0 2161 125 0 19 chr18 48100100 48100413 -38577135 + AluSx SINE Alu 1 307 -5 209 379 18 12 chr18 48100541 48100710 -38576838 + L2 LINE L2 1868 2037 -1277 1889 135 45 3 chr18 48100816 48101105 -38576443 + AluJo SINE Alu 1 301 -11 207 0 0 0 chr18 48101145 48101168 -38576380 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr18 48101371 48101392 -38576156 + AT_rich Low_complexity Low_complexity 1 21 0 634 212 76 35 chr18 48101393 48101591 -38575957 + L1MC5 LINE L1 7707 7912 -49 515 213 0 0 chr18 48101685 48101779 -38575769 + MER5A DNA MER1_type 95 188 -1 236 288 75 12 chr18 48102711 48102791 -38574757 - MIR SINE MIR -96 112 28 2303 107 0 0 chr18 48102824 48103122 -38574426 + AluSx SINE Alu 1 298 -14 2142 116 0 28 chr18 48103193 48103512 -38574036 + AluSx SINE Alu 1 310 -2 2278 110 0 7 chr18 48103628 48103937 -38573611 - AluSg SINE Alu -3 307 1 1391 186 77 19 chr18 48104599 48104910 -38572638 + MER58B DNA MER1_type 6 334 -7 334 290 145 43 chr18 48105055 48105262 -38572286 - MIR SINE MIR -33 229 2 1715 128 4 8 chr18 48105535 48105807 -38571741 + AluSx SINE Alu 48 312 0 799 138 4 169 chr18 48106273 48106504 -38571044 + 7SK RNA RNA 1 193 0 241 283 94 28 chr18 48106530 48106636 -38570912 + L2 LINE L2 3200 3312 -1 2455 101 8 8 chr18 48106671 48107026 -38570522 - THE1A LTR MaLR 0 355 1 1918 132 21 0 chr18 48107772 48108059 -38569489 - AluSx SINE Alu -19 293 1 240 150 0 0 chr18 48108067 48108107 -38569441 - Alu SINE Alu -177 125 86 726 257 38 55 chr18 48108109 48108305 -38569243 - L1M4c LINE L1 -4731 2228 2039 1967 116 60 3 chr18 48108305 48108589 -38568959 - AluSc SINE Alu -9 300 1 726 257 38 55 chr18 48108589 48108738 -38568810 - L1M4c LINE L1 -4920 2039 1889 1981 141 11 0 chr18 48108759 48109043 -38568505 - AluSx SINE Alu -25 287 1 1095 103 0 0 chr18 48109043 48109179 -38568369 - AluSq/x SINE Alu -177 136 1 460 177 1 49 chr18 48109180 48109298 -38568250 - L1M4c LINE L1 -4960 1895 1787 2401 97 0 3 chr18 48109298 48109607 -38567941 - AluSg SINE Alu -2 308 1 460 177 1 49 chr18 48109607 48109653 -38567895 - L1M4c LINE L1 -5068 1787 1740 484 58 81 52 chr18 48109653 48109826 -38567722 + (TA)n Simple_repeat Simple_repeat 1 178 0 535 49 70 65 chr18 48109845 48110513 -38567035 + (TA)n Simple_repeat Simple_repeat 1 671 0 2094 129 7 0 chr18 48110513 48110799 -38566749 - AluSx SINE Alu -24 288 1 4728 245 90 37 chr18 48110800 48112450 -38565098 - L1M4c LINE L1 -5107 1748 2 668 178 46 20 chr18 48112449 48112601 -38564947 + L1MB8 LINE L1 4845 5000 -1146 * 2095 110 41 0 chr18 48112615 48112905 -38564643 + AluSx SINE Alu 1 302 -10 1171 115 0 29 chr18 48112905 48113073 -38564475 + AluJb SINE Alu 135 297 -15 761 212 16 5 chr18 48113077 48113261 -38564287 + L1MB8 LINE L1 5019 5204 -942 1986 116 47 0 chr18 48113261 48113537 -38564011 + AluSx SINE Alu 1 289 -23 268 207 52 0 chr18 48113537 48113595 -38563953 + GA-rich Low_complexity Low_complexity 1 61 0 4008 162 48 64 chr18 48113596 48113708 -38563840 + L1MB8 LINE L1 5188 5300 -878 2082 128 3 7 chr18 48113708 48114014 -38563534 + AluSx SINE Alu 3 307 -5 4008 162 48 64 chr18 48114014 48114159 -38563389 + L1MB8 LINE L1 5300 5446 -732 1314 163 171 8 chr18 48114159 48114411 -38563137 + AluJb SINE Alu 1 293 -9 4008 162 48 64 chr18 48114411 48114975 -38562573 + L1MB8 LINE L1 5446 6018 -160 652 153 119 0 chr18 48114975 48115093 -38562455 + AluJo/FLAM SINE Alu 1 132 -170 2335 98 0 10 chr18 48115093 48115399 -38562149 + AluSg SINE Alu 3 305 -5 4008 162 48 64 chr18 48115399 48115562 -38561986 + L1MB8 LINE L1 6016 6177 -1 231 208 170 0 chr18 48116181 48116234 -38561314 - MIR SINE MIR -153 109 48 2306 96 0 10 chr18 48116292 48116595 -38560953 - AluSg SINE Alu -8 302 3 219 270 152 91 chr18 48117015 48117245 -38560303 - L2 LINE L2 -110 3162 2919 2497 65 3 0 chr18 48117669 48117963 -38559585 - AluSx SINE Alu -17 295 1 2152 135 0 0 chr18 48118018 48118315 -38559233 - AluSx SINE Alu -15 297 1 254 28 0 28 chr18 48118596 48118632 -38558916 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1683 93 0 9 chr18 48118634 48118848 -38558700 - AluSq SINE Alu -28 285 74 189 0 0 0 chr18 48118911 48118932 -38558616 + (TTA)n Simple_repeat Simple_repeat 2 22 0 646 179 0 0 chr18 48119045 48119151 -38558397 - U6 snRNA snRNA -1 106 1 1033 154 41 86 chr18 48119223 48119264 -38558284 + AluJo SINE Alu 87 128 -184 2283 130 0 0 chr18 48119264 48119571 -38557977 - AluSx SINE Alu -5 307 1 1033 154 41 86 chr18 48119571 48119749 -38557799 + AluJo SINE Alu 128 296 -16 474 237 59 15 chr18 48120091 48120226 -38557322 - MIR SINE MIR -109 153 13 2546 66 3 0 chr18 48120360 48120665 -38556883 + AluY SINE Alu 1 306 -5 853 112 0 70 chr18 48121327 48121470 -38556078 - FLAM_C SINE Alu 0 133 1 2201 118 0 23 chr18 48121557 48121863 -38555685 + AluSx SINE Alu 1 299 -13 947 203 0 0 chr18 48121863 48122021 -38555527 + AluJo/FRAM SINE Alu 134 291 -21 23 0 0 0 chr18 48122021 48122044 -38555504 + AT_rich Low_complexity Low_complexity 1 23 0 2133 127 0 0 chr18 48122404 48122695 -38554853 + AluSx SINE Alu 1 291 -21 2335 92 10 3 chr18 48122695 48122998 -38554550 + AluSg SINE Alu 1 305 -5 2294 99 7 0 chr18 48123421 48123715 -38553833 + AluSx SINE Alu 1 296 -16 2142 113 0 57 chr18 48124051 48124228 -38553320 - AluSx SINE Alu -12 300 115 414 0 0 0 chr18 48124228 48124274 -38553274 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2142 116 3 0 chr18 48124275 48124560 -38552988 - AluSx SINE Alu -26 286 1 2142 113 0 57 chr18 48124560 48124698 -38552850 - AluSx SINE Alu -196 116 1 2160 116 3 16 chr18 48124851 48125161 -38552387 + AluSg1 SINE Alu 1 306 -3 231 261 54 22 chr18 48126043 48126135 -38551413 + L1 LINE L1 4953 5047 -1099 712 208 0 0 chr18 48126161 48126286 -38551262 - FLAM_A SINE Alu -8 125 1 24 22 0 43 chr18 48126357 48126373 -38551175 + AT_rich Low_complexity Low_complexity 1 16 -28 2071 141 3 0 chr18 48126373 48126663 -38550885 - AluSx SINE Alu -21 291 1 24 22 0 43 chr18 48126663 48126692 -38550856 + AT_rich Low_complexity Low_complexity 16 44 0 300 238 86 12 chr18 48126886 48127052 -38550496 - L1M LINE L1 -776 5370 5199 730 284 36 78 chr18 48127079 48127381 -38550167 + MLT1H LTR MaLR 3 291 -258 1893 148 39 0 chr18 48127381 48127665 -38549883 + AluSx SINE Alu 1 295 -17 730 284 36 78 chr18 48127665 48127697 -38549851 + MLT1H LTR MaLR 291 323 -226 442 189 18 81 chr18 48127825 48127870 -38549678 - MLT1E3 LTR MaLR -475 149 103 2080 99 7 11 chr18 48127870 48128200 -38549348 + AluSg SINE Alu 2 330 0 442 189 18 81 chr18 48128200 48128264 -38549284 - MLT1E3 LTR MaLR -521 103 46 * 574 233 60 0 chr18 48128263 48128396 -38549152 - MLT2F LTR ERVL -517 146 6 2143 107 13 23 chr18 48128467 48128603 -38548945 + AluSq SINE Alu 1 137 -176 2025 143 0 10 chr18 48128603 48128917 -38548631 + AluSx SINE Alu 1 311 -1 2143 107 13 23 chr18 48128917 48129090 -38548458 + AluSq SINE Alu 137 307 -6 1982 124 4 0 chr18 48129094 48129368 -38548180 + AluSg SINE Alu 34 308 -2 523 183 325 0 chr18 48129427 48129553 -38547995 + AluJb SINE Alu 131 297 -15 1863 134 7 30 chr18 48129555 48129878 -38547670 + AluSx SINE Alu 3 312 0 2341 112 0 6 chr18 48130034 48130348 -38547200 + AluSq SINE Alu 1 312 -1 1758 174 3 3 chr18 48130392 48130680 -38546868 + AluJb SINE Alu 1 288 -24 274 197 40 0 chr18 48130687 48130763 -38546785 + L1M4 LINE L1 3151 3229 -2917 274 197 40 0 chr18 48130885 48130961 -38546587 + L1M4 LINE L1 3151 3229 -2917 456 214 18 9 chr18 48131434 48131546 -38546002 - L1MC4 LINE L1 -183 7859 7747 2334 109 0 0 chr18 48131563 48131865 -38545683 + AluSq SINE Alu 1 302 -11 1872 149 0 29 chr18 48133013 48133322 -38544226 + AluJo SINE Alu 4 303 -9 713 249 79 18 chr18 48133651 48133880 -38543668 + MIR SINE MIR 20 262 0 288 125 18 54 chr18 48134245 48134301 -38543247 + FRAM/FAM SINE Alu 1 53 -113 284 83 0 0 chr18 48134291 48134327 -38543221 + FLAM_A SINE Alu 86 121 -12 * 490 192 0 13 chr18 48135023 48135101 -38542447 + MER2 DNA MER2_type 1 77 -268 716 160 0 23 chr18 48135101 48135232 -38542316 - FLAM_C SINE Alu -2 141 14 2372 80 0 3 chr18 48135232 48135521 -38542027 + AluY SINE Alu 1 288 -23 927 176 164 29 chr18 48135545 48135789 -38541759 + MER2 DNA MER2_type 69 345 0 1062 188 80 108 chr18 48135945 48136307 -38541241 - MER57A LTR ERV1 -4 399 48 2205 120 3 0 chr18 48136309 48136608 -38540940 - AluSx SINE Alu -12 300 1 1070 88 0 15 chr18 48136609 48136746 -38540802 - AluSq/x SINE Alu -178 135 1 2154 107 3 26 chr18 48136899 48137208 -38540340 + AluSg1 SINE Alu 1 302 -7 231 261 54 22 chr18 48138090 48138182 -38539366 + L1 LINE L1 4953 5047 -1099 712 208 0 0 chr18 48138208 48138333 -38539215 - FLAM_A SINE Alu -8 125 1 24 22 0 43 chr18 48138404 48138420 -38539128 + AT_rich Low_complexity Low_complexity 1 16 -28 2071 141 3 0 chr18 48138420 48138710 -38538838 - AluSx SINE Alu -21 291 1 24 22 0 43 chr18 48138710 48138739 -38538809 + AT_rich Low_complexity Low_complexity 16 44 0 300 238 86 12 chr18 48138932 48139098 -38538450 - L1M LINE L1 -776 5370 5199 360 152 0 0 chr18 48139494 48139560 -38537988 + A-rich Low_complexity Low_complexity 1 66 0 664 223 38 6 chr18 48139592 48139749 -38537799 - MLT1J LTR MaLR 0 511 350 259 267 17 0 chr18 48139766 48139826 -38537722 + L2 LINE L2 3211 3271 -1 24 32 0 0 chr18 48140127 48140158 -38537390 + AT_rich Low_complexity Low_complexity 1 31 0 234 0 0 0 chr18 48140161 48140187 -38537361 + (TG)n Simple_repeat Simple_repeat 2 27 0 218 269 10 87 chr18 48140269 48140373 -38537175 + MIR SINE MIR 47 142 -120 1741 177 0 7 chr18 48140501 48140789 -38536759 + AluJb SINE Alu 5 290 -22 2073 95 39 3 chr18 48140989 48141272 -38536276 + AluY SINE Alu 2 294 -17 994 70 0 0 chr18 48141318 48141433 -38536115 - AluSq/x SINE Alu -188 125 11 2255 126 0 0 chr18 48142479 48142781 -38534767 - AluSx SINE Alu -10 302 1 23 0 0 0 chr18 48143476 48143499 -38534049 + AT_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr18 48143630 48143661 -38533887 + AT_rich Low_complexity Low_complexity 1 31 0 2205 106 3 10 chr18 48143753 48144056 -38533492 - AluSq SINE Alu -12 301 1 27 92 0 0 chr18 48144170 48144246 -38533302 + AT_rich Low_complexity Low_complexity 1 76 0 2142 116 3 7 chr18 48144253 48144547 -38533001 + AluSx SINE Alu 1 293 -19 1583 138 0 0 chr18 48144547 48144777 -38532771 + AluSg/x SINE Alu 82 312 0 2216 107 0 13 chr18 48145143 48145451 -38532097 + AluSg SINE Alu 1 304 -6 2422 92 0 7 chr18 48145783 48146088 -38531460 - AluSx SINE Alu -9 303 1 279 147 0 110 chr18 48146088 48146169 -38531379 + MER96B DNA MER1_type? 82 150 -267 1753 163 0 42 chr18 48146169 48146476 -38531072 - AluJo SINE Alu -18 294 1 279 147 0 110 chr18 48146476 48146503 -38531045 + MER96B DNA MER1_type? 150 178 -239 1535 153 61 11 chr18 48147289 48147550 -38529998 + AluJb SINE Alu 1 274 -38 302 155 42 70 chr18 48147566 48147637 -38529911 - MLT1D LTR MaLR -436 69 1 228 301 235 0 chr18 48147676 48147829 -38529719 - L2 LINE L2 -249 3064 2876 2058 90 8 0 chr18 48147988 48148244 -38529304 + AluSg SINE Alu 38 295 -15 3618 137 60 8 chr18 48148244 48148628 -38528920 - L1MC2 LINE L1 -11 6333 5900 1865 127 16 114 chr18 48148628 48149013 -38528535 + MER7A DNA MER2_type 2 346 0 3618 137 60 8 chr18 48149013 48149278 -38528270 - L1MC2 LINE L1 -444 5900 5650 199 289 0 48 chr18 48149946 48150029 -38527519 + MIR3 SINE MIR 124 202 -6 2080 116 14 7 chr18 48151419 48151713 -38525835 - AluSx SINE Alu -16 296 1 2096 128 10 3 chr18 48151746 48152043 -38525505 + AluSx SINE Alu 1 299 -13 6149 187 134 48 chr18 48152043 48152998 -38524550 + L1MDa LINE L1 122 994 -5546 753 179 0 8 chr18 48152998 48153121 -38524427 - FLAM_A SINE Alu -9 124 3 6149 187 134 48 chr18 48153121 48153826 -38523722 + L1MDa LINE L1 994 1924 -4616 1660 83 0 0 chr18 48153826 48154044 -38523504 + L1MA1 LINE L1 6081 6298 -4 905 225 7 5 chr18 48154059 48154263 -38523285 + L1MB3 LINE L1 5936 6143 -40 * 2822 115 1 13 chr18 48154255 48154729 -38522819 + L1M2 LINE L1 5210 5680 -617 764 147 8 4 chr18 48154727 48154865 -38522683 - L1MA5 LINE L1 -404 5887 5754 * 2130 125 0 3 chr18 48155130 48155427 -38522121 + AluSx SINE Alu 1 296 -16 1942 147 0 3 chr18 48155631 48155942 -38521606 - AluJo SINE Alu 0 310 1 286 190 0 25 chr18 48157141 48157220 -38520328 + GA-rich Low_complexity Low_complexity 2 78 0 429 239 0 0 chr18 48158122 48158260 -38519288 + G-rich Low_complexity Low_complexity 1 138 0 225 83 0 0 chr18 48158439 48158475 -38519073 + (A)n Simple_repeat Simple_repeat 1 36 0 180 0 0 0 chr18 48158857 48158877 -38518671 + (A)n Simple_repeat Simple_repeat 1 20 0 2414 91 3 0 chr18 48158879 48159188 -38518360 + AluSx SINE Alu 1 310 -2 1444 155 71 40 chr18 48159422 48159718 -38517830 - AluJo SINE Alu -7 305 1 1183 170 5 0 chr18 48159877 48160065 -38517483 + MER5A DNA MER1_type 1 189 0 2161 125 0 19 chr18 48160248 48160561 -38516987 + AluSx SINE Alu 1 307 -5 209 379 18 12 chr18 48160689 48160858 -38516690 + L2 LINE L2 1868 2037 -1277 1889 135 45 3 chr18 48160964 48161253 -38516295 + AluJo SINE Alu 1 301 -11 207 0 0 0 chr18 48161293 48161316 -38516232 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr18 48161519 48161540 -38516008 + AT_rich Low_complexity Low_complexity 1 21 0 634 212 76 35 chr18 48161541 48161739 -38515809 + L1MC5 LINE L1 7707 7912 -49 515 213 0 0 chr18 48161833 48161927 -38515621 + MER5A DNA MER1_type 95 188 -1 236 288 75 12 chr18 48162859 48162939 -38514609 - MIR SINE MIR -96 112 28 2303 107 0 0 chr18 48162972 48163270 -38514278 + AluSx SINE Alu 1 298 -14 2238 109 0 25 chr18 48163341 48163661 -38513887 + AluSx SINE Alu 1 312 0 2278 110 0 7 chr18 48163777 48164086 -38513462 - AluSg SINE Alu -3 307 1 1391 186 77 19 chr18 48164748 48165059 -38512489 + MER58B DNA MER1_type 6 334 -7 334 290 145 43 chr18 48165204 48165411 -38512137 - MIR SINE MIR -33 229 2 1715 128 4 8 chr18 48165684 48165956 -38511592 + AluSx SINE Alu 48 312 0 799 138 4 169 chr18 48166422 48166653 -38510895 + 7SK RNA RNA 1 193 0 241 283 94 28 chr18 48166679 48166785 -38510763 + L2 LINE L2 3200 3312 -1 2455 101 8 8 chr18 48166820 48167175 -38510373 - THE1A LTR MaLR 0 355 1 2073 142 0 10 chr18 48167921 48168217 -38509331 - AluSx SINE Alu -19 293 1 1729 121 43 53 chr18 48169228 48169509 -38508039 + AluSg SINE Alu 1 278 -32 2367 99 0 0 chr18 48170292 48170586 -38506962 + AluSx SINE Alu 3 296 -16 364 341 30 15 chr18 48171362 48171497 -38506051 - MIR3 SINE MIR -26 182 46 535 258 28 39 chr18 48171666 48171844 -38505704 - MER104 DNA MER2_type -2 178 3 2441 80 0 3 chr18 48172203 48172502 -38505046 - AluSx SINE Alu -14 298 1 292 353 13 67 chr18 48172969 48173207 -38504341 + L2 LINE L2 2998 3222 -50 1582 251 66 42 chr18 48173362 48173572 -38503976 - LTR16C LTR ERVL -4 487 283 2222 88 41 7 chr18 48173572 48173867 -38503681 + AluSx SINE Alu 1 305 -7 1582 251 66 42 chr18 48173867 48174127 -38503421 - LTR16C LTR ERVL -208 283 6 1762 161 17 92 chr18 48174319 48174507 -38503041 + MLT1B LTR MaLR 1 142 -248 2042 118 4 0 chr18 48174507 48174823 -38502725 + AluSx SINE Alu 1 317 0 1762 161 17 92 chr18 48174823 48175055 -38502493 + MLT1B LTR MaLR 142 390 0 399 329 62 6 chr18 48176242 48176403 -38501145 - ERVL LTR ERVL -1065 4699 4530 2444 87 0 0 chr18 48176430 48176728 -38500820 + AluSg SINE Alu 1 298 -12 356 208 0 14 chr18 48176732 48176804 -38500744 + MER106B DNA MER1_type 3 73 -986 2007 145 3 3 chr18 48176856 48177159 -38500389 + AluSg SINE Alu 1 303 -7 440 110 0 14 chr18 48177164 48177237 -38500311 + (GGGAGA)n Simple_repeat Simple_repeat 6 77 0 292 56 0 0 chr18 48177242 48177278 -38500270 + MER106B DNA MER1_type 948 983 -76 183 129 0 0 chr18 48177301 48177332 -38500216 + (A)n Simple_repeat Simple_repeat 1 31 0 236 114 14 100 chr18 48177347 48177403 -38500145 + MER106B DNA MER1_type 996 1046 -13 2043 130 16 10 chr18 48177403 48177710 -38499838 + AluSx SINE Alu 1 309 -3 236 114 14 100 chr18 48177710 48177723 -38499825 + MER106B DNA MER1_type 1046 1059 0 1655 318 62 32 chr18 48177733 48178277 -38499271 - ERVL LTR ERVL -1251 4513 3925 2067 120 13 7 chr18 48178277 48178577 -38498971 - AluSg SINE Alu -8 302 1 1655 318 62 32 chr18 48178577 48179023 -38498525 - ERVL LTR ERVL -1839 3925 3494 815 132 0 0 chr18 48179038 48179159 -38498389 + FLAM_A SINE Alu 18 138 -4 225 0 0 0 chr18 48179545 48179570 -38497978 + (T)n Simple_repeat Simple_repeat 1 25 0 1991 109 16 35 chr18 48179763 48179843 -38497705 - L1PA12 LINE L1 -57 6111 6031 1870 150 7 3 chr18 48179843 48180130 -38497418 - AluJb SINE Alu -24 288 1 1991 109 16 35 chr18 48180130 48180362 -38497186 - L1PA12 LINE L1 -137 6031 5805 1068 189 40 36 chr18 48180397 48180645 -38496903 + LTR8A LTR ERV1 1 249 -478 2057 70 0 0 chr18 48180648 48180891 -38496657 - AluSq SINE Alu -70 243 1 1715 118 7 59 chr18 48181012 48181135 -38496413 + AluSq SINE Alu 13 141 -183 2489 73 0 6 chr18 48181135 48181448 -38496100 + AluY SINE Alu 1 311 0 1715 118 7 59 chr18 48181448 48181651 -38495897 + AluSq SINE Alu 141 324 0 450 235 12 0 chr18 48181651 48181736 -38495812 + Tigger2 DNA MER2_type 2633 2718 0 2232 108 3 7 chr18 48182308 48182615 -38494933 - AluSp SINE Alu -7 306 1 291 262 63 68 chr18 48182688 48182864 -38494684 + L1ME LINE L1 5543 5557 -564 2133 95 14 7 chr18 48182864 48183149 -38494399 - AluSc SINE Alu -18 291 5 291 262 63 68 chr18 48183149 48183280 -38494268 + L1ME LINE L1 5557 5687 -434 1136 151 0 32 chr18 48183502 48183688 -38493860 + AluSg/x SINE Alu 122 301 -9 23 78 0 0 chr18 48183710 48183761 -38493787 + AT_rich Low_complexity Low_complexity 1 51 0 968 231 14 18 chr18 48183925 48184146 -38493402 + MIR SINE MIR 43 262 0 32 26 0 0 chr18 48184292 48184331 -38493217 + AT_rich Low_complexity Low_complexity 1 39 0 2113 110 32 0 chr18 48184367 48184649 -38492899 - AluSc SINE Alu -18 291 1 2029 114 0 71 chr18 48184649 48184974 -38492574 - AluSx SINE Alu -10 302 1 23 33 0 0 chr18 48185163 48185193 -38492355 + AT_rich Low_complexity Low_complexity 1 30 0 2324 85 27 0 chr18 48185256 48185551 -38491997 - AluSc SINE Alu -6 303 1 2049 108 20 10 chr18 48185875 48186170 -38491378 - AluSx SINE Alu -14 298 1 2006 119 3 45 chr18 48186770 48187081 -38490467 - AluSx SINE Alu -14 298 1 336 48 0 0 chr18 48187510 48187552 -38489996 + (CA)n Simple_repeat Simple_repeat 2 43 0 2106 113 0 46 chr18 48187789 48188116 -38489432 - AluSp SINE Alu -1 312 1 273 268 189 21 chr18 48188451 48188641 -38488907 + L3 LINE CR1 581 802 -775 4475 74 2 0 chr18 48188781 48189351 -38488197 + L1PA14 LINE L1 5514 6084 -77 2252 115 0 0 chr18 48190108 48190404 -38487144 - AluSx SINE Alu -16 296 1 2329 83 10 13 chr18 48190412 48190726 -38486822 - AluSq SINE Alu 0 313 1 359 250 250 23 chr18 48190871 48191043 -38486505 - MIR SINE MIR -24 238 28 406 252 36 0 chr18 48191879 48191990 -38485558 - MIR3 SINE MIR -28 180 66 2051 111 40 0 chr18 48192362 48192659 -38484889 - AluSx SINE Alu -3 309 1 225 0 0 0 chr18 48193417 48193442 -38484106 + (A)n Simple_repeat Simple_repeat 1 25 0 222 281 0 47 chr18 48194769 48194833 -38482715 + MIR3 SINE MIR 111 171 -37 182 232 125 0 chr18 48195590 48195646 -38481902 - L2 LINE L2 -74 3239 3177 213 255 0 0 chr18 48195687 48195734 -38481814 + MIR3 SINE MIR 156 202 -6 291 203 0 58 chr18 48195745 48195814 -38481734 + L1ME4a LINE L1 5976 6040 -81 242 283 115 18 chr18 48195976 48196202 -38481346 + L1MC4a LINE L1 5152 5399 -747 296 237 54 11 chr18 48196389 48196482 -38481066 + L1MC4a LINE L1 5814 5910 -1898 2262 94 7 0 chr18 48196543 48196829 -38480719 + AluY SINE Alu 1 288 -23 37 62 0 0 chr18 48197114 48197179 -38480369 + AT_rich Low_complexity Low_complexity 1 65 0 1906 152 10 0 chr18 48198082 48198372 -38479176 - AluSx SINE Alu -19 293 1 1744 182 14 0 chr18 48198483 48198780 -38478768 + AluJb SINE Alu 1 301 -11 716 305 179 7 chr18 48198813 48199266 -38478282 - L2 LINE L2 -946 2368 1838 975 188 0 6 chr18 48199559 48199740 -38477808 + MER5A DNA MER1_type 7 186 -3 816 148 0 0 chr18 48200308 48200430 -38477118 + AluSg/x SINE Alu 177 298 -14 434 265 83 30 chr18 48200514 48200646 -38476902 - L2 LINE L2 0 3272 3134 950 199 75 0 chr18 48200664 48200850 -38476698 - MLT1E LTR MaLR -8 585 386 761 274 51 79 chr18 48201016 48201683 -38475865 - L1MEd LINE L1 -4579 1731 1047 1744 133 51 0 chr18 48201683 48201976 -38475572 - L1MA8 LINE L1 -3 6288 5981 761 274 51 79 chr18 48201976 48202451 -38475097 - L1MEd LINE L1 -5263 1047 410 1699 111 111 0 chr18 48202451 48202703 -38474845 - AluSx SINE Alu -16 296 17 761 274 51 79 chr18 48202703 48202754 -38474794 - L1MEd LINE L1 -5900 410 359 561 164 63 75 chr18 48202854 48203013 -38474535 - L1MEd LINE L1 -5961 158 2 2080 138 0 0 chr18 48203569 48203874 -38473674 + AluSx SINE Alu 1 305 -7 2299 90 3 0 chr18 48204423 48204712 -38472836 + AluSg SINE Alu 1 290 -20 253 298 117 57 chr18 48205189 48205642 -38471906 + L1MC4a LINE L1 6118 6597 -1211 1118 97 0 7 chr18 48205714 48205858 -38471690 + AluSq/x SINE Alu 1 143 -170 513 58 0 0 chr18 48205858 48205927 -38471621 + Alu SINE Alu 240 308 -2 298 188 1 70 chr18 48205934 48206013 -38471535 + L1MC4a LINE L1 6695 6760 -1048 239 79 26 0 chr18 48206321 48206359 -38471189 + (TG)n Simple_repeat Simple_repeat 1 39 0 751 251 86 0 chr18 48206592 48206755 -38470793 - MER45A DNA AcHobo -1 177 1 3485 73 2 0 chr18 48206898 48207325 -38470223 + L1PA13 LINE L1 5725 6152 -11 2059 121 7 0 chr18 48207330 48207620 -38469928 + AluSp SINE Alu 2 293 -20 30 69 0 0 chr18 48207663 48207721 -38469827 + AT_rich Low_complexity Low_complexity 1 58 0 236 100 25 0 chr18 48207887 48207927 -38469621 + (CA)n Simple_repeat Simple_repeat 2 42 0 29 0 0 0 chr18 48208096 48208125 -38469423 + AT_rich Low_complexity Low_complexity 1 29 0 545 240 41 25 chr18 48208128 48208189 -38469359 + FLAM_A SINE Alu 1 60 -242 1881 161 0 7 chr18 48208189 48208488 -38469060 - AluJb SINE Alu -15 297 1 545 240 41 25 chr18 48208488 48208547 -38469001 + FLAM_A SINE Alu 60 123 -179 22 56 0 0 chr18 48209343 48209379 -38468169 + AT_rich Low_complexity Low_complexity 1 36 0 273 119 0 0 chr18 48209733 48209775 -38467773 + (A)n Simple_repeat Simple_repeat 1 42 0 2053 113 0 0 chr18 48209830 48210104 -38467444 - AluSx SINE Alu -38 274 1 808 266 75 27 chr18 48210132 48210563 -38466985 - L1ME LINE L1 -484 5637 5196 1275 160 0 49 chr18 48210647 48210891 -38466657 + AluJo SINE Alu 5 236 -76 892 219 10 108 chr18 48210898 48211062 -38466486 - HAL1b LINE L1 -48 1300 1121 2185 98 3 3 chr18 48211062 48211394 -38466154 + AluSq SINE Alu 1 332 0 892 219 10 108 chr18 48211394 48211462 -38466086 - HAL1b LINE L1 -227 1121 1048 1929 155 3 3 chr18 48211462 48211766 -38465782 + AluJb SINE Alu 6 309 -3 892 219 10 108 chr18 48211766 48211928 -38465620 - HAL1b LINE L1 -300 1048 943 2301 92 0 0 chr18 48211928 48212220 -38465328 + AluSx SINE Alu 1 292 -20 2300 112 3 0 chr18 48213882 48214194 -38463354 + AluSp SINE Alu 1 313 0 1556 221 82 84 chr18 48214528 48215233 -38462315 - HAL1b LINE L1 -518 830 127 22 0 0 0 chr18 48215703 48215725 -38461823 + AT_rich Low_complexity Low_complexity 1 22 0 456 283 67 8 chr18 48216186 48216306 -38461242 - L2 LINE L2 -18 3254 3128 2218 131 3 3 chr18 48216521 48216858 -38460690 + AluSq SINE Alu 1 337 0 360 292 100 0 chr18 48216862 48216992 -38460556 - MER117 DNA MER1_type -49 148 6 362 309 25 43 chr18 48217095 48217257 -38460291 - MIR3 SINE MIR -31 177 19 1851 227 29 20 chr18 48217299 48217465 -38460083 + MLT1C LTR MaLR 17 180 -287 2268 116 0 0 chr18 48217465 48217766 -38459782 + AluSx SINE Alu 1 301 -11 1851 227 29 20 chr18 48217766 48218044 -38459504 + MLT1C LTR MaLR 180 465 -2 413 293 81 16 chr18 48218453 48218576 -38458972 + MIR SINE MIR 16 146 -62 826 277 66 4 chr18 48218702 48218944 -38458604 + MIR SINE MIR 4 260 -2 1974 138 17 10 chr18 48219189 48219487 -38458061 + AluSx SINE Alu 1 300 -12 189 350 86 18 chr18 48219508 48219671 -38457877 - L2 LINE L2 -236 3036 2863 220 179 32 32 chr18 48220121 48220216 -38457332 + (TTA)n Simple_repeat Simple_repeat 1 95 0 463 302 16 8 chr18 48220358 48220487 -38457061 - MIR SINE MIR -106 156 27 2329 85 19 0 chr18 48221189 48221496 -38456052 - AluSp SINE Alu 0 313 1 378 227 27 0 chr18 48222041 48222116 -38455432 - MER112 DNA MER1_type -1 259 183 858 119 8 30 chr18 48222117 48222251 -38455297 - FRAM SINE Alu -21 155 25 418 200 11 21 chr18 48222296 48222391 -38455157 - MER112 DNA MER1_type -166 94 1 1079 76 0 0 chr18 48222904 48223035 -38454513 + AluSp SINE Alu 1 131 -182 244 188 31 0 chr18 48223610 48223674 -38453874 + CT-rich Low_complexity Low_complexity 3 68 0 1156 174 68 30 chr18 48224211 48224476 -38453072 + LTR39 LTR ERV1 1 275 -508 681 213 169 0 chr18 48224586 48224746 -38452802 + LTR39 LTR ERV1 597 783 0 189 74 0 0 chr18 48225289 48225316 -38452232 + (TTTTG)n Simple_repeat Simple_repeat 1 27 0 1777 129 33 4 chr18 48225318 48225589 -38451959 - AluJo SINE Alu -33 279 1 1932 143 6 22 chr18 48227153 48227467 -38450081 + AluJo SINE Alu 1 309 -3 8041 31 0 2 chr18 48227472 48229714 -38447834 + L1PA3 LINE L1 3898 6145 -10 758 88 0 36 chr18 48229624 48229714 -38447834 + L1PA3 LINE L1 4642 4734 -1445 258 0 0 29 chr18 48229714 48229748 -38447800 + (TAAA)n Simple_repeat Simple_repeat 3 68 0 758 88 0 36 chr18 48229748 48229838 -38447710 + L1PA3 LINE L1 4734 6179 0 830 179 25 37 chr18 48229846 48230008 -38447540 + FRAM SINE Alu 2 161 -15 921 223 16 0 chr18 48230010 48230203 -38447345 + L1MC4a LINE L1 4737 4932 -1214 425 285 63 32 chr18 48230466 48230627 -38446921 + MER5A DNA MER1_type 18 183 -6 28 0 0 0 chr18 48231308 48231336 -38446212 + AT_rich Low_complexity Low_complexity 1 28 0 1822 121 0 65 chr18 48231342 48231632 -38445916 + AluSg SINE Alu 1 271 -39 861 107 0 0 chr18 48231638 48231750 -38445798 + AluSp/q SINE Alu 182 293 -20 3501 205 57 31 chr18 48231815 48232013 -38445535 + L1MC4 LINE L1 7164 7355 -687 2213 196 34 34 chr18 48232013 48232518 -38445030 + MLT1D LTR MaLR 1 505 0 3501 205 57 31 chr18 48232518 48233058 -38444490 + L1MC4 LINE L1 7355 7929 -113 432 0 0 0 chr18 48233058 48233106 -38444442 + (TG)n Simple_repeat Simple_repeat 1 48 0 3501 205 57 31 chr18 48233106 48233223 -38444325 + L1MC4 LINE L1 7929 8042 0 2102 82 7 10 chr18 48233241 48233532 -38444016 + L1PA13 LINE L1 5874 6163 0 838 268 117 50 chr18 48233608 48233649 -38443899 + L1MC4a LINE L1 5270 5307 -855 2367 102 0 0 chr18 48233649 48233952 -38443596 + AluSc SINE Alu 1 303 -6 838 268 117 50 chr18 48233952 48234337 -38443211 + L1MC4a LINE L1 5307 5661 -501 1465 194 66 7 chr18 48234337 48234626 -38442922 + AluJb SINE Alu 1 306 -6 838 268 117 50 chr18 48234626 48234786 -38442762 + L1MC4a LINE L1 5661 5809 -353 2112 125 10 3 chr18 48234913 48235210 -38442338 - AluSx SINE Alu -13 299 1 2080 116 14 7 chr18 48235243 48235537 -38442011 + AluSx SINE Alu 1 296 -16 199 289 0 48 chr18 48236927 48237010 -38440538 - MIR3 SINE MIR -6 202 124 2696 117 30 12 chr18 48237678 48237943 -38439605 + L1MC2 LINE L1 5650 5928 -416 1865 127 16 114 chr18 48237943 48238328 -38439220 - MER7A DNA MER2_type 0 346 2 2696 117 30 12 chr18 48238328 48238490 -38439058 + L1MC2 LINE L1 5928 6085 -259 241 205 134 89 chr18 48238875 48238987 -38438561 + MER5A DNA MER1_type 66 182 -7 1066 96 45 0 chr18 48239064 48239221 -38438327 + L1PA10 LINE L1 6005 6168 0 1062 154 87 98 chr18 48239554 48239840 -38437708 - AluJo SINE Alu 0 312 30 2387 92 0 6 chr18 48240082 48240397 -38437151 + AluSq SINE Alu 1 313 0 774 151 43 0 chr18 48240420 48240559 -38436989 - MER65C LTR ERV1 0 461 317 781 235 6 11 chr18 48240570 48240749 -38436799 + FRAM SINE Alu 1 170 -6 1573 151 32 55 chr18 48240750 48240906 -38436642 - MER65C LTR ERV1 -157 304 157 2329 100 3 0 chr18 48240906 48241207 -38436341 + AluSx SINE Alu 1 302 -10 1573 151 32 55 chr18 48241207 48241361 -38436187 - MER65C LTR ERV1 -304 157 1 1857 112 7 72 chr18 48241398 48241725 -38435823 + AluSx SINE Alu 1 307 0 1504 173 72 14 chr18 48241729 48242007 -38435541 + AluSx SINE Alu 1 294 -18 2160 122 3 3 chr18 48242008 48242302 -38435246 + AluSx SINE Alu 1 294 -18 636 230 133 70 chr18 48242303 48242634 -38434914 - L1P5 LINE L1 -485 5636 5293 648 140 0 0 chr18 48242636 48242729 -38434819 - HY4 scRNA scRNA 0 93 1 281 206 27 27 chr18 48242792 48242865 -38434683 + L2 LINE L2 3241 3313 0 1208 275 98 8 chr18 48243090 48243476 -38434072 - MLT1F1 LTR MaLR 0 567 147 2261 103 3 0 chr18 48243738 48244038 -38433510 + AluSp SINE Alu 1 301 -12 2620 184 22 84 chr18 48244040 48244089 -38433459 + MER57-int LTR ERV1 4810 4860 -2677 1666 106 5 0 chr18 48244089 48244306 -38433242 - AluSg/x SINE Alu -14 298 81 2620 184 22 84 chr18 48244306 48244579 -38432969 + MER57-int LTR ERV1 4860 5148 -2389 1334 38 0 0 chr18 48244579 48244738 -38432810 + L1PA2 LINE L1 5997 6155 0 2620 184 22 84 chr18 48244738 48245108 -38432440 + MER57-int LTR ERV1 5148 5460 -2077 470 222 130 0 chr18 48245109 48245217 -38432331 + FLAM_C SINE Alu 2 123 -20 1128 219 13 17 chr18 48245235 48245472 -38432076 + MER57-int LTR ERV1 5450 5685 -1852 731 128 121 43 chr18 48246253 48246394 -38431154 - FRAM SINE Alu -13 153 2 2468 92 0 0 chr18 48246478 48246783 -38430765 + AluSq SINE Alu 1 305 -8 3605 106 15 4 chr18 48246927 48247448 -38430100 - MER41B LTR ERV1 -108 527 1 2430 72 0 10 chr18 48247821 48248136 -38429412 - AluY SINE Alu 0 311 3 216 233 88 107 chr18 48248621 48248710 -38428838 + MIR SINE MIR 9 95 -167 258 32 0 0 chr18 48248710 48248741 -38428807 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 216 233 88 107 chr18 48248741 48248810 -38428738 + MIR SINE MIR 95 164 -98 238 216 45 80 chr18 48249297 48249385 -38428163 + MIR SINE MIR 56 140 -122 1883 134 3 14 chr18 48249876 48250168 -38427380 - AluSq SINE Alu -17 296 8 315 159 43 14 chr18 48250444 48250513 -38427035 + MLT1J LTR MaLR 418 488 -23 873 211 61 45 chr18 48250523 48250769 -38426779 - MLT1J LTR MaLR 0 511 262 262 200 96 88 chr18 48250788 48250913 -38426635 - MLT1J LTR MaLR -383 128 3 291 262 107 10 chr18 48251198 48251301 -38426247 - L1ME3A LINE L1 -4 6166 6054 189 0 0 0 chr18 48251330 48251351 -38426197 + (T)n Simple_repeat Simple_repeat 1 21 0 2339 101 0 0 chr18 48301365 48301671 -38375877 - AluSg SINE Alu -4 306 1 2142 113 0 0 chr18 48302051 48302368 -38375180 - AluSx SINE Alu 0 317 1 816 174 102 0 chr18 48302795 48302962 -38374586 + MER6B DNA MER2_type 24 207 -3 2016 141 0 0 chr18 48303408 48303715 -38373833 + AluJb SINE Alu 1 307 0 24 0 0 0 chr18 48304051 48304075 -38373473 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr18 48307749 48307778 -38369770 + AT_rich Low_complexity Low_complexity 1 29 0 2375 70 3 7 chr18 48307841 48308140 -38369408 - AluSc SINE Alu -11 298 1 21 0 0 0 chr18 48308830 48308851 -38368697 + AT_rich Low_complexity Low_complexity 1 21 0 1849 166 0 10 chr18 48309225 48309532 -38368016 + AluJb SINE Alu 1 304 -8 342 201 128 39 chr18 48309598 48309640 -38367908 - L1ME3A LINE L1 -2331 5477 5440 2198 80 13 46 chr18 48309640 48309942 -38367606 + AluSx SINE Alu 6 297 -15 342 201 128 39 chr18 48309942 48310078 -38367470 - L1ME3A LINE L1 -2368 5440 5283 565 254 29 23 chr18 48310406 48310579 -38366969 + MER5B DNA MER1_type 4 177 -1 1456 158 12 4 chr18 48311072 48311325 -38366223 - L1MC1 LINE L1 0 6333 6079 543 245 224 17 chr18 48312076 48312317 -38365231 - L2 LINE L2 0 3313 3023 227 170 170 89 chr18 48312487 48312622 -38364926 + MER103 DNA DNA 6 151 -15 346 241 234 14 chr18 48312881 48313026 -38364522 + MER5B DNA MER1_type 2 178 0 2239 82 0 10 chr18 48313839 48314131 -38363417 - AluSg SINE Alu -21 289 1 2376 89 0 3 chr18 48315178 48315480 -38362068 - AluSq SINE Alu -12 301 1 2312 119 0 0 chr18 48315967 48316269 -38361279 - AluSp SINE Alu -11 302 1 1306 217 72 0 chr18 48316960 48317237 -38360311 - AluJb SINE Alu -5 297 1 2149 55 12 0 chr18 48317731 48317985 -38359563 - AluY SINE Alu -24 287 31 1740 161 46 7 chr18 48317990 48318275 -38359273 - AluJo SINE Alu -16 296 1 2108 92 14 7 chr18 48318286 48318596 -38358952 - AluSx SINE Alu 0 312 1 207 0 0 0 chr18 48319938 48319961 -38357587 + (T)n Simple_repeat Simple_repeat 1 23 0 2173 92 0 3 chr18 48320113 48320396 -38357152 - AluSq SINE Alu 0 313 32 21 0 0 0 chr18 48320734 48320755 -38356793 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18 48322145 48322177 -38355371 + AT_rich Low_complexity Low_complexity 1 32 0 282 57 0 0 chr18 48322513 48322548 -38355000 - U2 snRNA snRNA -153 35 1 2201 110 3 3 chr18 48322568 48322869 -38354679 - AluSx SINE Alu -11 301 1 194 214 24 0 chr18 48324085 48324127 -38353421 + MIR SINE MIR 105 147 -61 24 32 0 0 chr18 48324516 48324547 -38353001 + AT_rich Low_complexity Low_complexity 1 31 0 890 122 0 30 chr18 48324553 48324684 -38352864 - FLAM_C SINE Alu -16 127 1 2260 122 3 6 chr18 48325202 48325534 -38352014 - AluSx SINE Alu 0 312 1 2240 97 0 3 chr18 48325877 48326165 -38351383 - AluSx SINE Alu -25 287 1 409 288 0 0 chr18 48326973 48327053 -38350495 - L2 LINE L2 -25 3247 3168 368 336 154 54 chr18 48327269 48327558 -38349990 - L2 LINE L2 -459 2855 2508 225 0 0 0 chr18 48327558 48327583 -38349965 + (TG)n Simple_repeat Simple_repeat 2 26 0 368 336 154 54 chr18 48327583 48327721 -38349827 - L2 LINE L2 -806 2508 2385 752 191 0 0 chr18 48328093 48328219 -38349329 + AluJb SINE Alu 141 266 -46 182 280 202 43 chr18 48328469 48328543 -38349005 - L2 LINE L2 -1924 1390 1329 2446 62 0 10 chr18 48328543 48328848 -38348700 + AluY SINE Alu 1 302 -9 182 280 202 43 chr18 48328848 48329030 -38348518 - L2 LINE L2 -1985 1329 1093 2155 92 0 11 chr18 48329192 48329501 -38348047 + AluSc SINE Alu 1 306 0 287 296 219 24 chr18 48329605 48329852 -38347696 + L2 LINE L2 133 427 -2887 1768 161 4 4 chr18 48330106 48330386 -38347162 + AluSx SINE Alu 5 284 -28 21 36 0 0 chr18 48330483 48330511 -38347037 + AT_rich Low_complexity Low_complexity 1 28 0 2280 101 7 0 chr18 48331116 48331414 -38346134 - AluSp SINE Alu -13 300 1 21 0 0 0 chr18 48332405 48332426 -38345122 + AT_rich Low_complexity Low_complexity 1 21 0 2190 118 0 16 chr18 48332474 48332789 -38344759 - AluSg SINE Alu 0 310 1 1641 174 13 7 chr18 48332843 48333142 -38344406 + AluSx SINE Alu 1 301 -11 2146 127 13 0 chr18 48333174 48333473 -38344075 + AluSx SINE Alu 1 303 -9 193 390 43 14 chr18 48333930 48334071 -38343477 + MER5A DNA MER1_type 44 188 -1 391 253 92 35 chr18 48334182 48334356 -38343192 - MIR SINE MIR -10 252 69 614 234 143 33 chr18 48335128 48335438 -38342110 + L1ME3A LINE L1 5645 5968 -153 389 175 25 25 chr18 48335695 48335775 -38341773 - MER116 DNA Mariner 0 80 1 2140 94 29 0 chr18 48335966 48336267 -38341281 + AluSq SINE Alu 1 309 0 1679 126 60 80 chr18 48336331 48336633 -38340915 - AluSx SINE Alu -14 298 3 22 0 0 0 chr18 48339356 48339378 -38338170 + AT_rich Low_complexity Low_complexity 1 22 0 2092 134 3 3 chr18 48340387 48340685 -38336863 + AluSx SINE Alu 1 298 -14 23 0 0 0 chr18 48340869 48340892 -38336656 + GC_rich Low_complexity Low_complexity 1 23 0 871 91 0 0 chr18 48340903 48341013 -38336535 - AluSq/x SINE Alu -179 133 24 1354 220 161 68 chr18 48341013 48341472 -38336076 + MLT2F LTR ERVL 59 560 -103 240 111 0 0 chr18 48341475 48341511 -38336037 + (TG)n Simple_repeat Simple_repeat 1 36 0 2410 104 0 0 chr18 48341705 48342014 -38335534 - AluSg SINE Alu -1 309 1 1883 161 3 22 chr18 48342376 48342693 -38334855 - AluJo SINE Alu -1 311 1 349 268 95 62 chr18 48342930 48343173 -38334375 - L1MEd LINE L1 -5564 555 305 2367 109 0 0 chr18 48343174 48343486 -38334062 - AluSx SINE Alu 0 312 1 1961 109 0 7 chr18 48343954 48344228 -38333320 + AluSx SINE Alu 41 312 0 1326 258 41 54 chr18 48344334 48344796 -38332752 + L1ME3A LINE L1 5442 5897 -273 619 205 127 15 chr18 48344800 48345005 -38332543 + L1ME3A LINE L1 5934 6161 -9 1860 133 48 0 chr18 48345017 48345287 -38332261 - AluSx SINE Alu -21 291 9 1616 117 139 4 chr18 48346302 48346617 -38330931 - AluSx SINE Alu 0 351 1 1638 175 0 38 chr18 48347123 48347437 -38330111 - AluJb SINE Alu -8 304 3 1623 183 46 0 chr18 48347502 48347787 -38329761 - AluJb SINE Alu -6 306 9 391 202 11 0 chr18 48348086 48348175 -38329373 - L1MA4 LINE L1 -217 6083 5994 1961 175 3 0 chr18 48348182 48348485 -38329063 - AluJb SINE Alu -8 304 1 441 223 54 31 chr18 48348485 48348615 -38328933 + L2 LINE L2 674 806 -2508 352 274 62 0 chr18 48348617 48348730 -38328818 - MER5C DNA MER1_type 0 324 205 2261 114 0 0 chr18 48348798 48349096 -38328452 - AluSg SINE Alu -12 298 1 1543 282 139 7 chr18 48349160 48349727 -38327821 + L2 LINE L2 805 1446 -1868 189 0 0 0 chr18 48349873 48349894 -38327654 + (T)n Simple_repeat Simple_repeat 1 21 0 1972 145 10 3 chr18 48350213 48350509 -38327039 + AluSx SINE Alu 1 298 -14 27 0 0 0 chr18 48350509 48350536 -38327012 + AT_rich Low_complexity Low_complexity 1 27 0 2330 93 0 0 chr18 48350543 48350833 -38326715 + AluSc SINE Alu 3 292 -17 21 0 0 0 chr18 48350892 48350913 -38326635 + AT_rich Low_complexity Low_complexity 1 21 0 2141 125 0 3 chr18 48351025 48351328 -38326220 - AluSx SINE Alu -10 302 1 1769 180 0 3 chr18 48352286 48352593 -38324955 - AluJb SINE Alu 0 306 1 2330 82 0 10 chr18 48352611 48352744 -38324804 + AluSg SINE Alu 1 134 -176 2149 121 0 3 chr18 48352744 48353042 -38324506 + AluSg SINE Alu 2 298 -12 2330 82 0 10 chr18 48353042 48353200 -38324348 + AluSg SINE Alu 134 289 -21 641 205 177 105 chr18 48353504 48353962 -38323586 + L1MC5 LINE L1 7185 7675 -286 180 0 0 0 chr18 48354328 48354348 -38323200 + (A)n Simple_repeat Simple_repeat 1 20 0 2367 102 3 0 chr18 48354497 48354800 -38322748 - AluSc SINE Alu -5 304 1 2372 95 0 0 chr18 48355623 48355927 -38321621 - AluSg SINE Alu -6 304 1 850 321 87 52 chr18 48356120 48356663 -38320885 - L2 LINE L2 -602 2712 2129 2089 136 0 3 chr18 48356663 48356965 -38320583 + AluJb SINE Alu 1 301 -11 850 321 87 52 chr18 48356965 48357235 -38320313 - L2 LINE L2 -1185 2129 1870 1098 218 4 0 chr18 48357235 48357460 -38320088 - AluJb SINE Alu -3 309 84 180 0 0 0 chr18 48359146 48359166 -38318382 + (A)n Simple_repeat Simple_repeat 1 20 0 809 141 0 42 chr18 48359246 48359388 -38318160 - AluJo SINE Alu -176 136 1 746 159 0 0 chr18 48359943 48360056 -38317492 + FLAM_C SINE Alu 2 114 -19 216 0 0 0 chr18 48360056 48360080 -38317468 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 2524 61 0 3 chr18 48360119 48360416 -38317132 - AluY SINE Alu -14 297 2 2084 128 0 4 chr18 48360590 48360871 -38316677 - AluSg SINE Alu -30 280 1 192 225 0 0 chr18 48361043 48361083 -38316465 - MIR3 SINE MIR -18 190 151 2307 98 13 0 chr18 48361119 48361426 -38316122 - AluSp SINE Alu -2 311 1 2474 67 3 0 chr18 48361926 48362225 -38315323 + AluSp SINE Alu 1 300 -13 2081 121 3 3 chr18 48362608 48362898 -38314650 + AluSx SINE Alu 1 290 -22 1259 109 6 27 chr18 48363036 48363219 -38314329 - AluSg SINE Alu -131 179 1 2573 157 57 4 chr18 48363427 48363899 -38313649 + L1MC1 LINE L1 5719 6215 -118 235 135 0 96 chr18 48363885 48363937 -38313611 + L1MD3 LINE L1 6082 6128 -1867 * 286 82 143 0 chr18 48363980 48364029 -38313519 + L1MC2 LINE L1 6115 6170 -174 612 127 104 97 chr18 48364030 48364164 -38313384 + AluJo SINE Alu 2 136 -176 857 119 157 0 chr18 48364175 48364334 -38313214 + L1MC2 LINE L1 6156 6339 -5 477 267 29 63 chr18 48364364 48364570 -38312978 + MLT1K LTR MaLR 333 531 -57 1708 84 114 51 chr18 48365000 48365273 -38312275 - AluSg1 SINE Alu -19 290 1 1355 204 86 4 chr18 48365627 48365906 -38311642 - AluJo SINE Alu -10 302 1 610 226 9 9 chr18 48365922 48366037 -38311511 + FLAM_A SINE Alu 2 116 -17 26 30 0 0 chr18 48366037 48366070 -38311478 + AT_rich Low_complexity Low_complexity 1 33 0 225 0 0 0 chr18 48366272 48366297 -38311251 + (T)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr18 48366316 48366339 -38311209 + GC_rich Low_complexity Low_complexity 1 23 0 1622 89 0 0 chr18 48366874 48367076 -38310472 - AluSg SINE Alu -106 204 3 1718 147 3 33 chr18 48367735 48367905 -38309643 - AluJo SINE Alu -15 297 138 2146 92 34 7 chr18 48367905 48368200 -38309348 - AluSp SINE Alu -10 303 1 1718 147 3 33 chr18 48368200 48368335 -38309213 - AluJo SINE Alu -174 138 1 1415 152 18 143 chr18 48368558 48368704 -38308844 + AluJb SINE Alu 1 85 -217 2149 111 23 7 chr18 48368704 48369011 -38308537 - AluSx SINE Alu 0 312 1 1415 152 18 143 chr18 48369011 48369193 -38308355 + AluJb SINE Alu 85 288 -14 378 278 9 17 chr18 48369214 48369329 -38308219 - L2 LINE L2 -1 3312 3199 2144 128 10 0 chr18 48369588 48369894 -38307654 - AluSx SINE Alu -3 309 1 1366 167 33 4 chr18 48369923 48370163 -38307385 + AluJo SINE Alu 1 247 -65 2509 65 0 13 chr18 48370284 48370591 -38306957 - AluY SINE Alu -8 303 1 2143 119 3 0 chr18 48370642 48370937 -38306611 - AluSp SINE Alu -17 296 1 934 110 0 0 chr18 48370962 48371089 -38306459 + AluSg/x SINE Alu 178 304 -6 2320 86 3 0 chr18 48371132 48371424 -38306124 - AluSx SINE Alu -19 293 1 2214 90 0 4 chr18 48371996 48372274 -38305274 - AluSq SINE Alu -25 288 12 938 139 0 14 chr18 48372285 48372429 -38305119 - AluJo SINE Alu -169 143 2 586 129 0 0 chr18 48372515 48372600 -38304948 + AluJ/FLAM SINE Alu 2 86 -226 2224 104 7 7 chr18 48372714 48373021 -38304527 + AluSx SINE Alu 1 307 -5 2035 151 3 0 chr18 48373125 48373416 -38304132 - AluSx SINE Alu -20 292 1 22 0 0 0 chr18 48373473 48373495 -38304053 + AT_rich Low_complexity Low_complexity 1 22 0 2573 62 3 0 chr18 48373514 48373820 -38303728 - AluSp SINE Alu -6 307 1 2356 68 0 0 chr18 48373821 48374101 -38303447 - AluY SINE Alu -31 280 1 1596 221 87 68 chr18 48374148 48374690 -38302858 - MLT1F1 LTR MaLR 0 567 16 227 295 71 122 chr18 48374729 48374790 -38302758 - MLT1F1-int LTR MaLR -24 1347 1284 2068 109 46 0 chr18 48374790 48375074 -38302474 - AluSq SINE Alu -16 297 1 227 295 71 122 chr18 48375074 48375348 -38302200 - MLT1F1-int LTR MaLR -87 1284 1029 448 252 97 0 chr18 48375404 48375559 -38301989 - L1MEd LINE L1 -5042 1077 908 1903 131 3 30 chr18 48375560 48375857 -38301691 + AluSx SINE Alu 1 289 -23 1648 144 114 4 chr18 48375992 48376263 -38301285 + AluSx SINE Alu 1 301 -11 2177 116 3 0 chr18 48376374 48376666 -38300882 - AluSp SINE Alu -20 293 1 2128 130 0 3 chr18 48376669 48376970 -38300578 - AluSx SINE Alu -6 306 7 1053 202 210 0 chr18 48377081 48377329 -38300219 - AluJo SINE Alu -2 300 1 2230 91 14 3 chr18 48377396 48377693 -38299855 + AluSq SINE Alu 1 300 -13 195 42 0 0 chr18 48378640 48378664 -38298884 + (A)n Simple_repeat Simple_repeat 1 24 0 23 0 0 0 chr18 48378674 48378697 -38298851 + AT_rich Low_complexity Low_complexity 1 23 0 2290 103 3 0 chr18 48378933 48379225 -38298323 - AluSg SINE Alu -17 293 1 265 163 0 0 chr18 48379581 48379624 -38297924 + MLT2F LTR ERVL 32 74 -589 1121 150 0 6 chr18 48379644 48379824 -38297724 - AluSg/x SINE Alu -13 297 119 457 322 72 30 chr18 48381598 48382017 -38295531 - L1ME4a LINE L1 -191 5930 5497 701 280 56 5 chr18 48382115 48382329 -38295219 + MIR SINE MIR 21 245 -17 282 250 18 80 chr18 48382661 48382773 -38294775 + MIR SINE MIR 88 192 -70 195 100 0 0 chr18 48382791 48382821 -38294727 + (A)n Simple_repeat Simple_repeat 1 30 0 322 245 133 20 chr18 48382881 48382979 -38294569 - MIR SINE MIR -61 147 39 2350 104 0 0 chr18 48383997 48384304 -38293244 + AluSx SINE Alu 1 307 -5 259 189 14 14 chr18 48384310 48384384 -38293164 + GA-rich Low_complexity Low_complexity 1 74 0 1627 232 70 36 chr18 48384855 48385412 -38292136 + L1MC5 LINE L1 7018 7593 -368 1198 155 155 0 chr18 48385418 48385637 -38291911 + AluJb SINE Alu 1 253 -59 838 206 78 62 chr18 48385651 48385760 -38291788 + L1MC5 LINE L1 7605 7711 -250 1208 229 87 22 chr18 48385760 48386083 -38291465 - MER2 DNA MER2_type 0 344 1 838 206 78 62 chr18 48386083 48386293 -38291255 + L1MC5 LINE L1 7711 7929 -32 2139 133 0 0 chr18 48386302 48386596 -38290952 + AluSx SINE Alu 1 294 -18 2152 93 7 14 chr18 48386664 48386953 -38290595 - AluSc SINE Alu -10 299 13 1456 203 14 56 chr18 48388831 48389186 -38288362 + MER58B DNA MER1_type 2 341 0 435 68 0 0 chr18 48389795 48389854 -38287694 + (TTTTC)n Simple_repeat Simple_repeat 2 60 0 2467 90 3 0 chr18 48389954 48390290 -38287258 - AluSp SINE Alu 0 337 1 23 0 0 0 chr18 48390951 48390974 -38286574 + AT_rich Low_complexity Low_complexity 1 23 0 2274 94 3 3 chr18 48392469 48392766 -38284782 - AluSx SINE Alu -15 297 1 22 0 0 0 chr18 48393074 48393096 -38284452 + AT_rich Low_complexity Low_complexity 1 22 0 239 244 107 84 chr18 48393706 48393771 -38283777 - L1ME3A LINE L1 -72 6098 6036 2405 93 0 3 chr18 48393771 48394082 -38283466 - AluSg SINE Alu 0 310 1 239 244 107 84 chr18 48394082 48394147 -38283401 - L1ME3A LINE L1 -134 6036 5965 1271 171 58 4 chr18 48394148 48394314 -38283234 - AluJb SINE Alu -10 302 118 369 0 0 0 chr18 48394314 48394355 -38283193 + (TG)n Simple_repeat Simple_repeat 2 42 0 1271 171 58 4 chr18 48394355 48394428 -38283120 - AluJb SINE Alu -194 118 50 753 134 0 0 chr18 48394445 48394557 -38282991 - AluJb SINE Alu -195 117 6 259 247 0 27 chr18 48394993 48395066 -38282482 + LTR67 LTR ERVL 456 526 -31 188 268 0 73 chr18 48395145 48395227 -38282321 - L3 LINE CR1 -382 1195 1120 205 347 87 0 chr18 48395353 48395503 -38282045 + MIR3 SINE MIR 37 199 -9 197 309 32 32 chr18 48395509 48395603 -38281945 - L3 LINE CR1 -521 1056 963 514 258 63 42 chr18 48395803 48395993 -38281555 + MIR SINE MIR 21 214 -48 22 35 0 0 chr18 48398182 48398211 -38279337 + AT_rich Low_complexity Low_complexity 1 29 0 189 0 67 89 chr18 48398967 48399012 -38278536 + (TTTTTG)n Simple_repeat Simple_repeat 4 47 0 266 202 21 96 chr18 48399107 48399201 -38278347 - L2 LINE L2 -5 3267 3181 252 122 0 0 chr18 48399250 48399291 -38278257 + (TTC)n Simple_repeat Simple_repeat 2 42 0 24 0 0 0 chr18 48399436 48399460 -38278088 + AT_rich Low_complexity Low_complexity 1 24 0 2428 90 0 6 chr18 48402336 48402648 -38274900 + AluSq SINE Alu 1 310 -3 22 0 0 0 chr18 48403562 48403584 -38273964 + AT_rich Low_complexity Low_complexity 1 22 0 209 137 0 78 chr18 48404169 48404220 -38273328 - MIR SINE MIR -95 167 121 1868 217 125 18 chr18 48404771 48405624 -38271924 + L1MC4 LINE L1 5087 5401 -745 * 1927 181 54 3 chr18 48405273 48405659 -38271889 + L1MB7 LINE L1 5694 6099 -85 2256 194 108 4 chr18 48405661 48406151 -38271397 + MER44D DNA MER2_type 1 596 -9 538 126 0 0 chr18 48406156 48406243 -38271305 + L1MB7 LINE L1 6097 6183 -1 401 239 34 0 chr18 48407403 48407491 -38270057 + MIR SINE MIR 103 193 -69 266 296 39 55 chr18 48407720 48407885 -38269663 + MIR SINE MIR 38 198 -58 535 218 113 79 chr18 48407902 48408131 -38269417 - MER102b DNA MER1_type -6 335 99 253 300 0 0 chr18 48408531 48408601 -38268947 - MER102b DNA MER1_type -271 70 1 268 343 71 14 chr18 48409241 48409451 -38268097 - L2 LINE L2 -615 2699 2478 1317 281 87 34 chr18 48409573 48409624 -38267924 + HERVL LTR ERVL 2896 2943 -2711 2240 138 3 12 chr18 48409624 48409964 -38267584 - MER1B DNA MER1_type 0 337 1 1317 281 87 34 chr18 48409964 48410500 -38267048 + HERVL LTR ERVL 2943 3514 -2140 315 255 11 21 chr18 48410631 48410725 -38266823 + HERVL LTR ERVL 3683 3775 -1879 319 285 44 0 chr18 48411255 48411392 -38266156 + HERVL LTR ERVL 3861 4003 -1761 441 261 274 4 chr18 48411434 48411675 -38265873 + HERVL LTR ERVL 4035 4340 -1314 234 0 0 0 chr18 48411954 48411980 -38265568 + (TA)n Simple_repeat Simple_repeat 2 27 0 327 268 16 10 chr18 48412044 48412151 -38265397 + HERVL LTR ERVL 4700 4808 -682 1101 285 50 50 chr18 48412675 48413099 -38264449 + LTR16C LTR ERVL 68 491 0 1287 181 0 0 chr18 48413287 48413503 -38264045 + MER20 DNA MER1_type 1 216 -3 227 245 94 62 chr18 48413672 48413864 -38263684 - L2 LINE L2 -1504 1810 1613 1610 175 10 27 chr18 48415123 48415415 -38262133 - AluJb SINE Alu -25 287 1 36 53 0 0 chr18 48415731 48415788 -38261760 + AT_rich Low_complexity Low_complexity 1 57 0 337 274 48 41 chr18 48416299 48416445 -38261103 + MIR SINE MIR 99 245 -17 784 209 37 27 chr18 48416687 48416874 -38260674 + MER5A DNA MER1_type 1 189 0 474 265 86 13 chr18 48416894 48417045 -38260503 + MER5B DNA MER1_type 16 177 -1 465 225 0 0 chr18 48417238 48417327 -38260221 + FRAM SINE Alu 71 159 -17 400 228 22 0 chr18 48417330 48417422 -38260126 + MIR SINE MIR 28 121 -141 184 358 0 0 chr18 48418066 48418133 -38259415 + L2 LINE L2 2874 2940 -373 292 298 69 23 chr18 48418888 48419019 -38258529 + MIR SINE MIR 19 155 -107 261 245 181 0 chr18 48419328 48419422 -38258126 + L3 LINE CR1 185 295 -1282 1915 161 16 10 chr18 48419525 48419713 -38257835 - AluJb SINE Alu 0 312 120 204 40 0 0 chr18 48419713 48419738 -38257810 + (TG)n Simple_repeat Simple_repeat 2 26 0 1915 161 16 10 chr18 48419738 48419859 -38257689 - AluJb SINE Alu -192 120 1 284 260 42 10 chr18 48420196 48420292 -38257256 - L1ME4a LINE L1 -2 6119 6021 211 360 106 14 chr18 48420341 48420624 -38256924 + L3 LINE CR1 1162 1470 -107 1718 195 30 22 chr18 48421222 48421592 -38255956 - MLT1A2 LTR MaLR 0 374 2 211 196 0 71 chr18 48421651 48421707 -38255841 - L2 LINE L2 0 3272 3221 240 379 33 58 chr18 48422047 48422377 -38255171 - L2 LINE L2 -11 3261 2940 1863 150 4 4 chr18 48422475 48422755 -38254793 + AluJb SINE Alu 21 300 -12 180 0 0 0 chr18 48422874 48422894 -38254654 + (A)n Simple_repeat Simple_repeat 1 20 0 2019 231 38 10 chr18 48422940 48423446 -38254102 - MER69 DNA AcHobo -1933 593 74 191 243 40 40 chr18 48423639 48423713 -38253835 + MIR3 SINE MIR 1 74 -134 1724 180 17 14 chr18 48424013 48424308 -38253240 - AluJo SINE Alu -16 296 1 320 264 14 0 chr18 48424758 48424830 -38252718 - L2 LINE L2 0 3272 3200 1338 198 33 30 chr18 48425182 48425485 -38252063 + AluJo SINE Alu 2 305 -7 255 79 0 0 chr18 48426324 48426362 -38251186 + (T)n Simple_repeat Simple_repeat 1 38 0 359 294 14 7 chr18 48426973 48427119 -38250429 - MER5A DNA MER1_type 0 189 43 204 267 13 53 chr18 48429561 48429636 -38247912 - MIR SINE MIR -91 117 46 362 238 30 0 chr18 48430146 48430247 -38247301 - L1MA10 LINE L1 -4 6330 6227 696 172 64 19 chr18 48430411 48430568 -38246980 - MER53 DNA DNA 0 189 26 1664 148 60 11 chr18 48430575 48430858 -38246690 - AluJb SINE Alu -15 297 1 583 291 54 65 chr18 48430978 48431424 -38246124 - L3 LINE CR1 -549 1028 588 217 225 34 101 chr18 48431625 48431653 -38245895 - L3 LINE CR1 -1121 456 428 2194 124 7 0 chr18 48431653 48431959 -38245589 + AluSx SINE Alu 1 308 -4 217 225 34 101 chr18 48431959 48432019 -38245529 - L3 LINE CR1 -1149 428 374 2052 123 3 0 chr18 48432528 48432812 -38244736 + AluSx SINE Alu 1 285 -27 351 44 0 0 chr18 48432812 48432857 -38244691 + (CA)n Simple_repeat Simple_repeat 2 46 0 460 250 23 70 chr18 48432885 48433057 -38244491 - MIR SINE MIR -86 176 13 228 313 23 0 chr18 48434086 48434217 -38243331 + (CA)n Simple_repeat Simple_repeat 2 135 0 258 255 128 34 chr18 48434555 48434704 -38242844 - MIR3 SINE MIR -24 184 22 240 100 0 0 chr18 48435598 48435638 -38241910 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 188 269 0 0 chr18 48436004 48436056 -38241492 - L2 LINE L2 -254 3059 3008 314 330 0 0 chr18 48436555 48436661 -38240887 - LTR65 LTR ERV1 -9 660 555 720 218 46 11 chr18 48437029 48437203 -38240345 + MIR SINE MIR 83 262 0 240 368 6 42 chr18 48437645 48437811 -38239737 + MIR3 SINE MIR 8 167 -41 479 265 231 24 chr18 48437815 48438113 -38239435 - L1MC4a LINE L1 -1917 5891 5532 191 262 49 0 chr18 48438963 48439024 -38238524 - L2 LINE L2 -2 3270 3207 271 191 15 29 chr18 48439556 48439624 -38237924 - L2 LINE L2 0 3272 3206 2392 29 44 0 chr18 48440602 48440904 -38236644 - AluY SINE Alu 0 314 1 2856 264 109 63 chr18 48441464 48442359 -38235189 + HAL1 LINE L1 2 855 -1652 2505 45 0 0 chr18 48442359 48442673 -38234875 + L1PA7 LINE L1 5828 6141 -13 2856 264 109 63 chr18 48442673 48443599 -38233949 + HAL1 LINE L1 855 1906 -601 634 188 0 69 chr18 48443669 48443813 -38233735 + FLAM_C SINE Alu 7 140 -3 541 285 23 47 chr18 48443829 48444043 -38233505 + HAL1 LINE L1 1951 2159 -348 1322 194 19 9 chr18 48444691 48445011 -38232537 - MER33 DNA MER1_type 0 324 2 2498 85 0 0 chr18 48445143 48445450 -38232098 - AluSc SINE Alu -2 307 1 1818 182 22 3 chr18 48447428 48447785 -38229763 + MLT1A1 LTR MaLR 1 364 -1 287 255 14 71 chr18 48449870 48450011 -38227537 - MIR3 SINE MIR -67 141 9 332 300 91 9 chr18 48450538 48450748 -38226800 + L3 LINE CR1 1065 1291 -286 204 387 54 0 chr18 48450793 48450904 -38226644 + L3 LINE CR1 1434 1550 -27 350 301 21 0 chr18 48452143 48452236 -38225312 + L2 LINE L2 3153 3247 -25 279 0 0 0 chr18 48452237 48452268 -38225280 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 2402 106 0 0 chr18 48452769 48453071 -38224477 - AluSq SINE Alu -11 302 1 227 277 31 0 chr18 48454175 48454240 -38223308 + MIR SINE MIR 86 152 -56 470 268 16 8 chr18 48454960 48455083 -38222465 - L2 LINE L2 0 3313 3190 812 180 42 74 chr18 48455112 48455299 -38222249 + MER33 DNA MER1_type 51 242 -2343 1586 182 28 28 chr18 48455299 48455590 -38221958 - AluJo SINE Alu -21 291 1 812 180 42 74 chr18 48455590 48455655 -38221893 + MER33 DNA MER1_type 242 296 -2289 2388 69 14 3 chr18 48455655 48455944 -38221604 - AluSx SINE Alu -20 292 1 812 180 42 74 chr18 48455944 48455973 -38221575 + MER33 DNA MER1_type 296 324 0 871 283 175 12 chr18 48455980 48456631 -38220917 - L2 LINE L2 -132 3181 2422 1904 210 146 2 chr18 48456631 48457111 -38220437 + MLT1H LTR MaLR 1 549 0 311 198 70 70 chr18 48457860 48458032 -38219516 - MIR SINE MIR -63 145 12 2252 117 0 19 chr18 48458107 48458423 -38219125 - AluY SINE Alu -1 310 1 188 200 18 0 chr18 48458957 48459012 -38218536 + (TG)n Simple_repeat Simple_repeat 1 56 0 255 322 11 6 chr18 48459032 48459219 -38218329 + (TG)n Simple_repeat Simple_repeat 1 188 0 492 270 31 44 chr18 48459422 48459581 -38217967 + MIR SINE MIR 36 192 -70 210 238 0 119 chr18 48460080 48460164 -38217384 - MIR SINE MIR -116 146 73 188 241 93 0 chr18 48460767 48460821 -38216727 + MIR SINE MIR 86 144 -64 253 286 114 29 chr18 48461645 48461750 -38215798 - MIR3 SINE MIR -27 181 68 319 252 166 29 chr18 48462502 48462641 -38214907 + MIR SINE MIR 28 185 -77 705 172 8 0 chr18 48463990 48464118 -38213430 - MER20 DNA MER1_type -2 217 89 351 326 124 17 chr18 48464142 48464320 -38213228 - MIR SINE MIR -55 207 11 1432 227 108 38 chr18 48464529 48464982 -38212566 - MLT1H LTR MaLR -52 497 13 322 271 108 23 chr18 48465113 48465242 -38212306 + L2 LINE L2 3132 3271 -1 193 221 29 7 chr18 48466076 48466212 -38211336 + (TG)n Simple_repeat Simple_repeat 1 139 0 261 225 24 12 chr18 48466276 48466445 -38211103 + (TG)n Simple_repeat Simple_repeat 1 171 0 2584 70 3 0 chr18 48466623 48466935 -38210613 - AluSp SINE Alu 0 313 1 1851 137 0 4 chr18 48467176 48467446 -38210102 + AluSg SINE Alu 35 303 -7 2085 146 0 13 chr18 48468697 48469037 -38208511 + AluSx SINE Alu 1 336 0 226 343 20 50 chr18 48469220 48469421 -38208127 - L3 LINE CR1 -2 1575 1381 2445 86 0 7 chr18 48469604 48469908 -38207640 - AluSq SINE Alu -9 304 3 2097 173 31 23 chr18 48470019 48470481 -38207067 + MER69 DNA AcHobo 1984 2452 -74 2475 87 0 3 chr18 48470481 48470791 -38206757 - AluSp SINE Alu -4 309 1 2097 173 31 23 chr18 48470791 48470809 -38206739 + MER69 DNA AcHobo 2452 2468 -58 216 352 47 16 chr18 48471442 48471570 -38205978 - MER5A DNA MER1_type -23 166 35 194 301 65 72 chr18 48471443 48471596 -38205952 + MER5B DNA MER1_type 25 176 -2 * 323 305 99 0 chr18 48471703 48471834 -38205714 + MIR SINE MIR 23 166 -96 213 94 0 0 chr18 48473704 48473736 -38203812 + (GA)n Simple_repeat Simple_repeat 2 33 0 22 35 0 0 chr18 48473811 48473840 -38203708 + AT_rich Low_complexity Low_complexity 1 29 0 1730 165 13 20 chr18 48473895 48474198 -38203350 - AluJo SINE Alu -11 301 1 486 0 0 0 chr18 48474225 48474279 -38203269 + (TG)n Simple_repeat Simple_repeat 2 55 0 327 25 0 0 chr18 48475024 48475064 -38202484 + (TG)n Simple_repeat Simple_repeat 1 40 0 1620 130 13 17 chr18 48475409 48475708 -38201840 - L1MA8 LINE L1 -11 6280 5983 435 279 46 41 chr18 48475776 48475973 -38201575 + MLT1J2 LTR MaLR 252 449 -1 195 129 0 0 chr18 48476057 48476088 -38201460 + (TCCA)n Simple_repeat Simple_repeat 2 32 0 219 321 225 21 chr18 48476878 48477065 -38200483 + L2 LINE L2 3026 3250 -22 3004 263 71 17 chr18 48477086 48478064 -38199484 + L1MC4a LINE L1 5258 6302 -1506 2030 139 0 17 chr18 48478064 48478404 -38199144 - AluJb SINE Alu 0 312 1 3004 263 71 17 chr18 48478404 48478507 -38199041 + L1MC4a LINE L1 6302 6398 -1410 464 204 6 77 chr18 48478490 48478671 -38198877 + L1MC4 LINE L1 7676 7843 -199 * 552 281 89 25 chr18 48478720 48478955 -38198593 - MIR SINE MIR 0 262 13 351 0 0 0 chr18 48478971 48479010 -38198538 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 358 176 11 11 chr18 48480330 48480421 -38197127 + (CATCC)n Simple_repeat Simple_repeat 4 94 0 1472 267 77 30 chr18 48480530 48481073 -38196475 + MER90 LTR ERV1 1 569 -6 253 312 28 28 chr18 48481129 48481238 -38196310 + MIR SINE MIR 38 146 -62 321 271 10 10 chr18 48481352 48481448 -38196100 + MER94 DNA DNA 37 132 -2 1290 218 64 44 chr18 48481512 48481966 -38195582 + MLT1C LTR MaLR 1 463 -4 2108 157 13 0 chr18 48482424 48482730 -38194818 - AluSx SINE Alu -2 310 1 302 233 75 53 chr18 48483375 48483508 -38194040 - L1MC3 LINE L1 -1632 6153 6018 853 132 0 0 chr18 48483512 48483633 -38193915 - AluSg/x SINE Alu -10 300 180 4758 221 91 32 chr18 48483644 48483960 -38193588 - L1M4 LINE L1 -1505 4641 4345 180 0 0 0 chr18 48483960 48483980 -38193568 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1496 172 0 86 chr18 48483985 48484288 -38193260 - AluJo SINE Alu -35 277 1 4758 221 91 32 chr18 48484288 48484602 -38192946 - L1M4 LINE L1 -1804 4342 4048 2241 100 6 10 chr18 48484602 48484913 -38192635 - AluSg SINE Alu 0 310 1 4758 221 91 32 chr18 48484913 48485600 -38191948 - L1M4 LINE L1 -2098 4048 3205 261 0 0 0 chr18 48485600 48485629 -38191919 + (TC)n Simple_repeat Simple_repeat 2 30 0 4758 221 91 32 chr18 48485629 48485899 -38191649 - L1M4 LINE L1 -2941 3205 2952 881 238 105 54 chr18 48486096 48486533 -38191015 + MLT1J LTR MaLR 17 575 -40 216 341 45 0 chr18 48486766 48486854 -38190694 + MIR3 SINE MIR 69 160 -48 233 259 0 19 chr18 48486854 48486908 -38190640 + Charlie4 DNA MER1_type 1 53 -1908 295 307 62 33 chr18 48487205 48487309 -38190239 - L1ME4a LINE L1 -66 6055 5955 1779 122 9 83 chr18 48487309 48487646 -38189902 - AluSx SINE Alu 0 312 1 295 307 62 33 chr18 48487646 48487782 -38189766 - L1ME4a LINE L1 -166 5955 5808 251 298 48 12 chr18 48488409 48488493 -38189055 - MIR SINE MIR -81 181 95 248 75 0 25 chr18 48489869 48489909 -38187639 + (GGA)n Simple_repeat Simple_repeat 1 39 0 488 329 38 9 chr18 48490407 48490620 -38186928 + MIR SINE MIR 31 249 -13 243 224 32 88 chr18 48490642 48490767 -38186781 + MLT1I LTR MaLR 101 218 -191 190 313 175 31 chr18 48490944 48491104 -38186444 + L3 LINE CR1 1312 1494 -83 845 219 18 36 chr18 48492217 48492441 -38185107 + LTR16C LTR ERVL 125 344 -147 1169 271 84 33 chr18 48492443 48492966 -38184582 - MLT1H LTR MaLR -2 590 1 566 176 47 40 chr18 48492967 48493115 -38184433 + LTR16C LTR ERVL 341 489 -2 403 333 15 10 chr18 48493230 48493425 -38184123 - LTR67 LTR ERVL -325 232 37 2548 192 25 29 chr18 48493792 48494348 -38183200 + MLT2B3 LTR ERVL 1 554 0 1669 269 65 47 chr18 48494865 48494906 -38182642 - HAL1 LINE L1 -10 2497 2458 1140 153 222 12 chr18 48494906 48495154 -38182394 + AluJb SINE Alu 3 302 0 1669 269 65 47 chr18 48495154 48495896 -38181652 - HAL1 LINE L1 -49 2458 1700 1131 286 43 11 chr18 48496047 48496421 -38181127 - HAL1 LINE L1 -780 1727 1342 1674 235 103 53 chr18 48497023 48497720 -38179828 - HAL1 LINE L1 -1179 1328 597 884 283 21 53 chr18 48497819 48498250 -38179298 + MLT1L LTR MaLR 197 613 -2 307 164 66 0 chr18 48498337 48498398 -38179150 - L2 LINE L2 0 3313 3249 438 305 79 6 chr18 48498490 48498667 -38178881 - MIR SINE MIR -10 252 63 191 205 121 24 chr18 48498849 48498932 -38178616 - L2 LINE L2 -18 3254 3164 2500 179 40 30 chr18 48499127 48499730 -38177818 + L1MB4 LINE L1 5570 6178 -2 435 218 9 142 chr18 48501296 48501438 -38176110 + MER5A DNA MER1_type 4 111 -78 2029 131 7 16 chr18 48501438 48501743 -38175805 - AluJo SINE Alu -4 308 7 435 218 9 142 chr18 48501743 48501811 -38175737 + MER5A DNA MER1_type 111 186 -3 2556 72 3 0 chr18 48501858 48502162 -38175386 - AluSp SINE Alu -8 305 1 1298 303 36 21 chr18 48502553 48503028 -38174520 - MLT1J LTR MaLR -29 482 1 1764 172 0 57 chr18 48503355 48503686 -38173862 + AluJb SINE Alu 1 312 0 2425 55 0 26 chr18 48504305 48504614 -38172934 - AluY SINE Alu -10 301 1 293 281 37 0 chr18 48504661 48504743 -38172805 - MLT1J LTR MaLR -4 507 423 2284 125 0 3 chr18 48505132 48505443 -38172105 - AluSx SINE Alu -2 310 1 747 202 86 74 chr18 48505452 48505662 -38171886 - L1MC5 LINE L1 -32 7929 7712 1094 231 86 25 chr18 48505662 48505986 -38171562 + MER2 DNA MER2_type 1 344 0 747 202 86 74 chr18 48505986 48506111 -38171437 - L1MC5 LINE L1 -249 7712 7590 1155 154 154 9 chr18 48506111 48506332 -38171216 - AluJb SINE Alu -59 253 1 1519 233 68 36 chr18 48506338 48506896 -38170652 - L1MC5 LINE L1 -368 7593 7018 259 189 14 14 chr18 48507368 48507442 -38170106 + CT-rich Low_complexity Low_complexity 1 74 0 2307 104 0 7 chr18 48507448 48507757 -38169791 - AluSx SINE Alu -5 307 1 359 324 108 11 chr18 48508757 48508933 -38168615 + MIR3 SINE MIR 16 208 0 195 100 0 0 chr18 48508938 48508968 -38168580 + (T)n Simple_repeat Simple_repeat 1 30 0 315 259 17 78 chr18 48508986 48509102 -38168446 - MIR SINE MIR -70 192 84 733 279 56 9 chr18 48509430 48509645 -38167903 - MIR SINE MIR -17 245 21 431 333 59 34 chr18 48509719 48510163 -38167385 + L1ME4a LINE L1 5476 5930 -191 310 167 42 35 chr18 48512231 48512375 -38165173 + (CCG)n Simple_repeat Simple_repeat 3 147 0 36 0 0 0 chr18 48512501 48512537 -38165011 + GC_rich Low_complexity Low_complexity 1 36 0 405 0 0 0 chr18 48512787 48512832 -38164716 + (TG)n Simple_repeat Simple_repeat 1 45 0 327 113 0 0 chr18 48513161 48513214 -38164334 + (TG)n Simple_repeat Simple_repeat 1 53 0 199 79 53 0 chr18 48515338 48515376 -38162172 + A-rich Low_complexity Low_complexity 1 40 0 319 299 87 24 chr18 48518552 48518679 -38158869 - L2 LINE L2 -1 3312 3178 263 285 95 19 chr18 48520232 48520390 -38157158 - MIR SINE MIR -46 216 47 385 353 0 22 chr18 48521072 48521211 -38156337 - L1ME4a LINE L1 -199 5922 5787 251 301 108 11 chr18 48521468 48521561 -38155987 + MIR SINE MIR 44 145 -63 214 270 72 27 chr18 48521712 48521823 -38155725 + MIR3 SINE MIR 45 160 -48 763 168 0 26 chr18 48524445 48524600 -38152948 - L1MB4 LINE L1 -1 6179 6029 299 256 124 51 chr18 48524735 48524872 -38152676 + MIR SINE MIR 64 210 -52 184 286 0 65 chr18 48525780 48525857 -38151691 + MIR SINE MIR 181 252 -10 304 241 46 11 chr18 48525958 48526045 -38151503 + MIR SINE MIR 113 202 -60 248 305 12 12 chr18 48526051 48526133 -38151415 - L2 LINE L2 -1 3271 3190 242 204 0 0 chr18 48526167 48526216 -38151332 - MIR SINE MIR -21 241 193 532 224 43 19 chr18 48526903 48527064 -38150484 - MER103 DNA DNA -1 165 1 392 0 0 20 chr18 48527079 48527128 -38150420 + (TG)n Simple_repeat Simple_repeat 1 48 0 1648 219 25 11 chr18 48527351 48527711 -38149837 - MLT1A1 LTR MaLR 0 365 1 263 263 150 0 chr18 48529397 48529477 -38148071 - MER5A DNA MER1_type -25 164 73 283 306 126 24 chr18 48530458 48530664 -38146884 - L3 LINE CR1 -524 1053 827 889 233 119 52 chr18 48530747 48531091 -38146457 - MLT1J LTR MaLR -144 367 1 440 279 27 20 chr18 48531458 48531605 -38145943 + MIR SINE MIR 79 226 -36 287 242 110 11 chr18 48531644 48531735 -38145813 + MIR SINE MIR 157 256 -6 235 174 43 0 chr18 48532156 48532202 -38145346 - MIR3 SINE MIR -27 181 134 481 258 49 31 chr18 48532859 48533022 -38144526 + MER104 DNA Tc2 14 179 -1 2047 126 0 17 chr18 48533185 48533478 -38144070 - AluSx SINE Alu -24 288 1 276 100 0 0 chr18 48534117 48534157 -38143391 + (ATG)n Simple_repeat Simple_repeat 1 40 0 727 287 46 58 chr18 48534411 48534756 -38142792 - L2 LINE L2 0 3313 2973 218 263 18 0 chr18 48535233 48535290 -38142258 + MER5B DNA MER1_type 25 82 -96 337 269 38 65 chr18 48535504 48535690 -38141858 - L2 LINE L2 -27 3286 3106 1501 216 88 30 chr18 48535983 48536414 -38141134 - MLT1C LTR MaLR -10 457 2 234 265 24 12 chr18 48537055 48537138 -38140410 + L2 LINE L2 3187 3270 -2 329 283 71 13 chr18 48537229 48537373 -38140175 + MIR SINE MIR 34 181 -60 350 276 138 10 chr18 48537628 48537831 -38139717 - L2 LINE L2 -257 3056 2828 1325 241 106 27 chr18 48537891 48538298 -38139250 - MLT1J LTR MaLR -72 439 1 362 339 29 23 chr18 48540008 48540179 -38137369 + MIR3 SINE MIR 35 206 -2 276 373 20 0 chr18 48541074 48541176 -38136372 - MIR3 SINE MIR -1 207 104 529 237 23 15 chr18 48541295 48541426 -38136122 + L2 LINE L2 3182 3313 0 1913 155 0 13 chr18 48542218 48542534 -38135014 - AluSx SINE Alu 0 312 1 1713 137 0 7 chr18 48543795 48544066 -38133482 - AluSg SINE Alu -7 303 35 2201 89 0 13 chr18 48544309 48544623 -38132925 + AluSp SINE Alu 1 310 -3 201 188 14 58 chr18 48545001 48545070 -38132478 + L2 LINE L2 3018 3083 -189 329 315 0 11 chr18 48545090 48545179 -38132369 - L2 LINE L2 0 3313 3226 183 367 0 0 chr18 48545579 48545639 -38131909 + MIR3 SINE MIR 148 207 -1 198 245 19 0 chr18 48545973 48546026 -38131522 + MIR SINE MIR 84 137 -125 356 349 30 12 chr18 48546090 48546259 -38131289 - MER5B DNA MER1_type -3 175 4 418 286 143 18 chr18 48546267 48546435 -38131113 + MER5A DNA MER1_type 1 189 0 972 241 52 12 chr18 48547021 48547270 -38130278 + MIR SINE MIR 3 261 -1 255 351 130 11 chr18 48547255 48547440 -38130108 - MIR SINE MIR -10 252 46 * 282 116 0 0 chr18 48548256 48548299 -38129249 + (CA)n Simple_repeat Simple_repeat 1 43 0 500 274 94 37 chr18 48548489 48548734 -38128814 - MIR SINE MIR 0 262 4 2410 129 22 3 chr18 48549248 48549605 -38127943 - THE1B LTR MaLR 0 364 1 255 273 34 11 chr18 48550057 48550145 -38127403 - MIR SINE MIR -116 146 57 217 307 59 20 chr18 48550580 48550681 -38126867 + MIR SINE MIR 20 124 -84 219 188 0 0 chr18 48551339 48551387 -38126161 + (TG)n Simple_repeat Simple_repeat 1 48 0 281 289 17 61 chr18 48552085 48552216 -38125332 - MIR SINE MIR -66 142 30 1815 206 14 8 chr18 48552586 48552946 -38124602 - L1MB3 LINE L1 -3 6180 5819 1913 137 0 7 chr18 48553627 48553956 -38123592 + AluSx SINE Alu 1 327 0 246 235 106 24 chr18 48554215 48554300 -38123248 - L2 LINE L2 -39 3233 3142 267 278 56 9 chr18 48554637 48554745 -38122803 - MIR SINE MIR -85 177 65 2191 92 7 7 chr18 48555021 48555327 -38122221 - AluSc SINE Alu -3 306 1 239 283 17 0 chr18 48555668 48555728 -38121820 - L2 LINE L2 -1 3312 3252 207 247 140 11 chr18 48556662 48556755 -38120793 - MIR SINE MIR -63 145 41 353 164 33 0 chr18 48557829 48557890 -38119658 - MIR SINE MIR -119 143 81 196 319 75 0 chr18 48558523 48558617 -38118931 + MIR3 SINE MIR 104 204 -4 228 250 0 0 chr18 48558861 48558913 -38118635 - MIR SINE MIR -21 241 190 228 225 56 0 chr18 48559431 48559487 -38118061 + MIR SINE MIR 90 149 -113 1641 166 7 10 chr18 48559935 48560231 -38117317 + AluJo SINE Alu 1 295 -17 633 245 57 49 chr18 48561668 48561933 -38115615 - LTR37B LTR ERV1 -5 463 197 2270 78 10 7 chr18 48561950 48562256 -38115292 - AluY SINE Alu 0 311 5 422 252 9 9 chr18 48562362 48562469 -38115079 - LTR37B LTR ERV1 -361 107 1 209 292 0 0 chr18 48563100 48563148 -38114400 - MER91 DNA MER1_type -2 188 141 839 125 0 16 chr18 48563155 48563276 -38114272 + FLAM_C SINE Alu 1 121 -191 211 51 0 51 chr18 48563276 48563315 -38114233 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 183 184 0 0 chr18 48563801 48563839 -38113709 + (TG)n Simple_repeat Simple_repeat 1 38 0 411 106 0 0 chr18 48564978 48565044 -38112504 + (TCCA)n Simple_repeat Simple_repeat 2 67 0 213 290 84 19 chr18 48565046 48565153 -38112395 - L2 LINE L2 -14 3299 3186 368 280 83 42 chr18 48565636 48565804 -38111744 - MER5A DNA MER1_type -5 184 10 268 337 20 40 chr18 48566290 48566489 -38111059 - MER117 DNA MER1_type 0 197 3 286 363 0 0 chr18 48566490 48566592 -38110956 - MIR3 SINE MIR -47 161 60 257 250 21 154 chr18 48566647 48566767 -38110781 - MER103 DNA DNA -2 164 76 207 0 0 0 chr18 48566767 48566790 -38110758 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 257 250 21 154 chr18 48566790 48566857 -38110691 - MER103 DNA DNA -90 76 2 221 287 64 43 chr18 48567879 48567973 -38109575 - MIR3 SINE MIR -47 161 66 1742 159 3 3 chr18 48568179 48568468 -38109080 - AluJb SINE Alu -10 302 14 363 309 150 34 chr18 48569193 48569400 -38108148 + MIR SINE MIR 29 259 -3 212 375 52 0 chr18 48569714 48569850 -38107698 + MIR SINE MIR 46 188 -74 200 219 16 0 chr18 48570214 48570278 -38107270 + A-rich Low_complexity Low_complexity 1 65 0 * 425 167 64 21 chr18 48570255 48570653 -38106895 + (CA)n Simple_repeat Simple_repeat 1 415 0 213 301 86 0 chr18 48621875 48621968 -38055580 + MIR3 SINE MIR 104 204 -4 228 250 0 0 chr18 48622211 48622263 -38055285 - MIR SINE MIR -21 241 190 228 225 56 0 chr18 48622779 48622835 -38054713 + MIR SINE MIR 90 149 -113 1707 167 7 3 chr18 48623279 48623573 -38053975 + AluJo SINE Alu 1 295 -17 908 252 52 95 chr18 48624991 48625272 -38052276 - LTR37B LTR ERV1 -5 463 210 2375 78 10 0 chr18 48625272 48625580 -38051968 - AluY SINE Alu 0 311 1 908 252 52 95 chr18 48625580 48625782 -38051766 - LTR37B LTR ERV1 -258 210 1 209 292 0 0 chr18 48626409 48626457 -38051091 - MER91 DNA MER1_type -2 188 141 864 126 0 8 chr18 48626464 48626584 -38050964 + FLAM_C SINE Alu 1 121 -191 211 51 0 51 chr18 48626584 48626623 -38050925 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 183 184 0 0 chr18 48627106 48627144 -38050404 + (TG)n Simple_repeat Simple_repeat 1 38 0 462 108 0 0 chr18 48628271 48628345 -38049203 + (TCCA)n Simple_repeat Simple_repeat 2 75 0 213 290 84 19 chr18 48628347 48628454 -38049094 - L2 LINE L2 -14 3299 3186 368 280 83 42 chr18 48628935 48629103 -38048445 - MER5A DNA MER1_type -5 184 10 268 330 25 35 chr18 48629584 48629781 -38047767 - MER117 DNA MER1_type 0 197 3 286 363 0 0 chr18 48629782 48629884 -38047664 - MIR3 SINE MIR -47 161 60 270 243 21 153 chr18 48629935 48630056 -38047492 - MER103 DNA DNA -1 165 76 207 0 0 0 chr18 48630056 48630079 -38047469 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 270 243 21 153 chr18 48630079 48630146 -38047402 - MER103 DNA DNA -90 76 2 239 286 61 41 chr18 48631160 48631258 -38046290 - MIR3 SINE MIR -43 165 66 1805 158 3 0 chr18 48631464 48631755 -38045793 - AluJb SINE Alu -10 302 11 370 311 151 29 chr18 48632467 48632673 -38044875 + MIR SINE MIR 29 259 -3 212 375 52 0 chr18 48632987 48633123 -38044425 + MIR SINE MIR 46 188 -74 425 162 59 21 chr18 48633486 48633925 -38043623 + (CA)n Simple_repeat Simple_repeat 1 455 0 266 286 114 29 chr18 48634705 48634810 -38042738 - MIR3 SINE MIR -27 181 68 332 252 166 29 chr18 48635562 48635701 -38041847 + MIR SINE MIR 28 185 -77 705 172 8 0 chr18 48637050 48637178 -38040370 - MER20 DNA MER1_type -2 217 89 351 326 124 17 chr18 48637202 48637380 -38040168 - MIR SINE MIR -55 207 11 1432 227 108 38 chr18 48637589 48638042 -38039506 - MLT1H LTR MaLR -52 497 13 322 271 108 23 chr18 48638173 48638302 -38039246 + L2 LINE L2 3132 3271 -1 217 173 27 18 chr18 48639136 48639246 -38038302 + (TG)n Simple_repeat Simple_repeat 1 111 0 199 200 11 11 chr18 48639291 48639386 -38038162 + (TG)n Simple_repeat Simple_repeat 1 95 0 338 180 31 12 chr18 48639406 48639567 -38037981 + (TG)n Simple_repeat Simple_repeat 1 164 0 182 118 29 0 chr18 48639586 48639620 -38037928 + (TG)n Simple_repeat Simple_repeat 1 35 0 249 225 24 12 chr18 48639684 48639853 -38037695 + (TG)n Simple_repeat Simple_repeat 1 171 0 255 230 22 0 chr18 48639896 48640035 -38037513 + (TG)n Simple_repeat Simple_repeat 2 143 0 409 294 14 7 chr18 48640654 48640800 -38036748 - MER5A DNA MER1_type 0 189 43 190 263 18 0 chr18 48641436 48641493 -38036055 - MIR SINE MIR -63 145 88 220 267 13 53 chr18 48643243 48643318 -38034230 - MIR SINE MIR -91 117 46 336 238 30 0 chr18 48643828 48643929 -38033619 - L1MA10 LINE L1 -4 6330 6227 647 172 48 0 chr18 48644105 48644250 -38033298 + MER53 DNA DNA 23 174 -15 1700 163 53 3 chr18 48644257 48644540 -38033008 - AluJb SINE Alu -15 297 1 591 300 69 119 chr18 48644660 48645335 -38032213 - L3 LINE CR1 -549 1028 417 2119 120 7 0 chr18 48645335 48645642 -38031906 + AluSx SINE Alu 1 309 0 591 300 69 119 chr18 48645642 48645966 -38031582 - L3 LINE CR1 -1160 417 78 2052 123 3 0 chr18 48646211 48646495 -38031053 + AluSx SINE Alu 1 285 -27 351 44 0 0 chr18 48646495 48646540 -38031008 + (CA)n Simple_repeat Simple_repeat 2 46 0 477 244 23 70 chr18 48646568 48646740 -38030808 - MIR SINE MIR -86 176 13 1001 53 0 0 chr18 48647857 48647970 -38029578 - AluSp SINE Alu -200 113 1 201 162 0 0 chr18 48648100 48648137 -38029411 + T-rich Low_complexity Low_complexity 1 37 0 440 331 41 0 chr18 48648186 48648358 -38029190 + MIR3 SINE MIR 24 202 -6 2207 96 0 30 chr18 48648643 48648946 -38028602 + AluSx SINE Alu 1 294 -18 425 296 62 6 chr18 48648991 48649153 -38028395 - L2 LINE L2 -183 3089 2919 220 309 16 8 chr18 48649480 48649603 -38027945 + (CA)n Simple_repeat Simple_repeat 2 125 0 279 248 128 34 chr18 48649941 48650090 -38027458 - MIR3 SINE MIR -24 184 22 240 100 0 0 chr18 48650984 48651024 -38026524 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 188 269 0 0 chr18 48651390 48651442 -38026106 - L2 LINE L2 -254 3059 3008 314 330 0 0 chr18 48651941 48652047 -38025501 - LTR65 LTR ERV1 -9 660 555 720 218 46 11 chr18 48652415 48652589 -38024959 + MIR SINE MIR 83 262 0 221 345 24 48 chr18 48653031 48653199 -38024349 + MIR3 SINE MIR 8 171 -37 470 264 224 20 chr18 48653199 48653498 -38024050 - L1MC4a LINE L1 -1917 5891 5532 191 262 49 0 chr18 48654347 48654408 -38023140 - L2 LINE L2 -2 3270 3207 271 191 15 29 chr18 48654940 48655008 -38022540 - L2 LINE L2 0 3272 3206 188 241 93 0 chr18 48656279 48656333 -38021215 - MIR SINE MIR -64 144 86 210 238 0 119 chr18 48656934 48657018 -38020530 + MIR SINE MIR 73 146 -116 492 270 31 44 chr18 48657517 48657676 -38019872 - MIR SINE MIR -70 192 36 255 322 11 6 chr18 48657879 48658066 -38019482 + (CA)n Simple_repeat Simple_repeat 1 188 0 188 200 18 0 chr18 48658086 48658141 -38019407 + (CA)n Simple_repeat Simple_repeat 1 56 0 2252 117 0 19 chr18 48658675 48658991 -38018557 + AluY SINE Alu 1 310 -1 311 198 70 70 chr18 48659066 48659238 -38018310 + MIR SINE MIR 12 189 -63 1904 210 146 2 chr18 48659987 48660467 -38017081 - MLT1H LTR MaLR 0 549 1 856 283 174 17 chr18 48660467 48661121 -38016427 + L2 LINE L2 2422 3181 -132 826 177 43 71 chr18 48661128 48661157 -38016391 - MER33 DNA MER1_type -2261 324 296 2397 69 14 3 chr18 48661157 48661447 -38016101 + AluSx SINE Alu 1 293 -19 826 177 43 71 chr18 48661447 48661511 -38016037 - MER33 DNA MER1_type -2289 296 232 1586 182 28 28 chr18 48661511 48661802 -38015746 + AluJo SINE Alu 1 291 -21 826 177 43 71 chr18 48661802 48661989 -38015559 - MER33 DNA MER1_type -2353 232 51 470 268 16 8 chr18 48662018 48662141 -38015407 + L2 LINE L2 3190 3313 0 227 277 31 0 chr18 48662861 48662926 -38014622 - MIR SINE MIR -56 152 86 210 341 0 23 chr18 48663266 48663354 -38014194 + CT-rich Low_complexity Low_complexity 4 89 0 2412 106 0 0 chr18 48663999 48664301 -38013247 + AluSq SINE Alu 1 302 -11 279 0 0 0 chr18 48664802 48664833 -38012715 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 350 301 21 0 chr18 48664834 48664927 -38012621 - L2 LINE L2 -25 3247 3153 204 387 54 0 chr18 48666166 48666277 -38011271 - L3 LINE CR1 -27 1550 1434 332 300 91 9 chr18 48666322 48666532 -38011016 - L3 LINE CR1 -286 1291 1065 472 284 52 36 chr18 48667059 48667253 -38010295 + MIR3 SINE MIR 9 205 -3 262 237 13 26 chr18 48667313 48667389 -38010159 + CT-rich Low_complexity Low_complexity 3 77 0 1818 182 22 3 chr18 48669230 48669587 -38007961 - MLT1A1 LTR MaLR -1 364 1 2519 81 0 0 chr18 48671565 48671872 -38005676 + AluSc SINE Alu 1 307 -2 1322 194 19 9 chr18 48672004 48672324 -38005224 + MER33 DNA MER1_type 2 324 0 553 285 23 47 chr18 48672973 48673187 -38004361 - HAL1 LINE L1 -348 2159 1951 634 188 0 69 chr18 48673203 48673347 -38004201 - FLAM_C SINE Alu -3 140 7 2856 264 109 63 chr18 48673417 48674343 -38003205 - HAL1 LINE L1 -601 1906 1024 2505 45 0 0 chr18 48674343 48674657 -38002891 - L1PA7 LINE L1 -13 6141 5828 2856 264 109 63 chr18 48674657 48675552 -38001996 - HAL1 LINE L1 -1483 1024 2 2393 29 44 0 chr18 48676112 48676414 -38001134 + AluY SINE Alu 1 314 0 341 243 37 0 chr18 48676955 48677062 -38000486 + G-rich Low_complexity Low_complexity 3 113 0 226 343 20 50 chr18 48677159 48677360 -38000188 + L3 LINE CR1 1381 1575 -2 340 202 96 75 chr18 48677550 48677621 -37999927 + MIR3 SINE MIR 79 154 -54 2434 165 46 6 chr18 48677621 48678124 -37999424 - Charlie1b DNA MER1_type 0 523 1 340 202 96 75 chr18 48678124 48678146 -37999402 + MIR3 SINE MIR 154 174 -34 215 61 30 0 chr18 48678854 48678887 -37998661 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 213 154 0 0 chr18 48679693 48679732 -37997816 + (TG)n Simple_repeat Simple_repeat 2 40 0 534 169 40 16 chr18 48679767 48679877 -37997671 + L1MC4 LINE L1 7913 8028 -14 183 80 0 0 chr18 48679877 48679902 -37997646 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 534 169 40 16 chr18 48679902 48679915 -37997633 + L1MC4 LINE L1 8028 8039 -3 242 297 44 11 chr18 48682091 48682182 -37995366 + MIR3 SINE MIR 90 183 -25 374 287 86 23 chr18 48682271 48682445 -37995103 - MIR SINE MIR -40 222 38 1030 186 81 74 chr18 48683152 48683256 -37994292 - L1MC5 LINE L1 -36 7925 7823 2369 101 3 0 chr18 48683256 48683562 -37993986 - AluSc SINE Alu 0 309 3 1030 186 81 74 chr18 48683562 48683618 -37993930 - L1MC5 LINE L1 -138 7823 7769 1534 159 32 44 chr18 48683618 48683958 -37993590 + MER44D DNA MER2_type 1 606 -3 1030 186 81 74 chr18 48683958 48684227 -37993321 - L1MC5 LINE L1 -192 7769 7492 705 231 14 32 chr18 48684214 48684435 -37993113 - L1MEc LINE L1 -2370 3845 3629 * 1820 127 35 25 chr18 48684443 48684726 -37992822 - AluJo SINE Alu -24 288 3 463 256 0 0 chr18 48684729 48684819 -37992729 - FLAM_A SINE Alu -51 91 2 785 251 111 36 chr18 48684820 48685043 -37992505 - L1MEc LINE L1 -2715 3500 3295 2199 55 95 0 chr18 48685043 48685317 -37992231 + AluY SINE Alu 1 300 -11 2715 33 3 0 chr18 48685319 48685624 -37991924 + AluY SINE Alu 1 306 -5 785 251 111 36 chr18 48685624 48685812 -37991736 - L1MEc LINE L1 -2920 3295 3055 3977 274 51 37 chr18 48685814 48686745 -37990803 - L1MEc LINE L1 -3220 2995 2079 186 43 0 0 chr18 48686745 48686768 -37990780 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 3977 274 51 37 chr18 48686768 48686972 -37990576 - L1MEc LINE L1 -4136 2079 1879 1108 240 4 9 chr18 48686972 48687197 -37990351 + MER58A DNA MER1_type 1 224 0 3977 274 51 37 chr18 48687197 48687923 -37989625 - L1MEc LINE L1 -4336 1879 1165 1451 217 3 31 chr18 48687923 48688209 -37989339 - AluJb SINE Alu -34 278 1 3977 274 51 37 chr18 48688209 48689316 -37988232 - L1MEc LINE L1 -5050 1165 37 1858 196 45 111 chr18 48689341 48689825 -37987723 - L1MC5 LINE L1 -476 7485 7075 2407 112 0 0 chr18 48689825 48690137 -37987411 + AluSx SINE Alu 1 312 0 1858 196 45 111 chr18 48690137 48690460 -37987088 - L1MC5 LINE L1 -886 7075 6732 276 207 92 46 chr18 48690808 48690895 -37986653 + MIR3 SINE MIR 99 189 -19 318 237 0 75 chr18 48691984 48692077 -37985471 + MIR SINE MIR 107 192 -70 297 299 19 28 chr18 48692336 48692443 -37985105 + MIR3 SINE MIR 100 205 -3 826 241 51 14 chr18 48692463 48692679 -37984869 - MIR SINE MIR -3 259 36 709 134 7 35 chr18 48692732 48692874 -37984674 - MER96B DNA MER1_type? -238 179 42 1867 148 74 20 chr18 48692945 48693297 -37984251 + THE1C LTR MaLR 1 371 -4 822 245 49 5 chr18 48693304 48693508 -37984040 + MIR SINE MIR 16 228 -34 401 350 0 0 chr18 48694663 48694783 -37982765 + MER5B DNA MER1_type 1 120 -58 45 29 0 14 chr18 48694813 48694845 -37982703 + AT_rich Low_complexity Low_complexity 1 32 -37 3026 151 33 36 chr18 48694845 48694950 -37982598 + L1MC2 LINE L1 5725 5829 -515 1601 214 0 32 chr18 48694950 48695259 -37982289 + AluJo SINE Alu 1 299 -13 3026 151 33 36 chr18 48695259 48695707 -37981841 + L1MC2 LINE L1 5829 6278 -66 2202 148 0 0 chr18 48695707 48696017 -37981531 - AluSx SINE Alu -2 310 1 3026 151 33 36 chr18 48696017 48696072 -37981476 + L1MC2 LINE L1 6278 6332 -12 45 29 0 14 chr18 48696072 48696109 -37981439 + AT_rich Low_complexity Low_complexity 32 69 0 577 265 52 68 chr18 48696227 48696476 -37981072 + MIR SINE MIR 9 253 -9 202 237 17 85 chr18 48696602 48696661 -37980887 - L2 LINE L2 -21 3292 3238 328 293 108 77 chr18 48696932 48697281 -37980267 + L1MDb LINE L1 756 1093 -4987 1704 180 51 0 chr18 48697281 48697575 -37979973 + AluJb SINE Alu 1 309 -3 328 293 108 77 chr18 48697575 48697721 -37979827 + L1MDb LINE L1 1093 3338 -2742 2215 123 7 0 chr18 48698993 48699303 -37978245 + AluSx SINE Alu 1 312 0 222 150 0 0 chr18 48700767 48700807 -37976741 + (TTTTTG)n Simple_repeat Simple_repeat 2 41 0 277 238 18 131 chr18 48701376 48701553 -37975995 + MIR SINE MIR 25 185 -59 450 267 87 20 chr18 48701917 48702067 -37975481 + L3 LINE CR1 1229 1388 -189 210 204 409 0 chr18 48702175 48702268 -37975280 - L2 LINE L2 -15 3298 3168 463 337 15 1 chr18 48702646 48702802 -37974746 + MIR3 SINE MIR 33 192 -16 212 171 0 0 chr18 48703798 48703839 -37973709 + A-rich Low_complexity Low_complexity 1 41 0 27 73 0 0 chr18 48703933 48703988 -37973560 + AT_rich Low_complexity Low_complexity 1 55 0 23 0 0 0 chr18 48704095 48704118 -37973430 + AT_rich Low_complexity Low_complexity 1 23 0 372 310 52 26 chr18 48704557 48704712 -37972836 + MIR3 SINE MIR 19 177 -31 287 253 32 11 chr18 48704779 48704801 -37972747 + GA-rich Low_complexity Low_complexity 1 21 -76 2363 95 3 7 chr18 48704801 48705106 -37972442 + AluSq SINE Alu 1 304 -9 287 253 32 11 chr18 48705106 48705178 -37972370 + GA-rich Low_complexity Low_complexity 21 97 0 270 262 8 41 chr18 48706701 48706823 -37970725 + CT-rich Low_complexity Low_complexity 4 121 0 1547 181 12 23 chr18 48706915 48707174 -37970374 - AluJb SINE Alu -56 256 1 980 133 92 5 chr18 48707396 48707592 -37969956 - L1MC2 LINE L1 -2 6342 6130 916 212 26 5 chr18 48708525 48708718 -37968830 + MIR SINE MIR 65 261 -1 208 239 60 0 chr18 48709778 48709845 -37967703 + L3 LINE CR1 1367 1437 -140 520 195 97 0 chr18 48710179 48710292 -37967256 - MER96 DNA MER1_type? -51 124 1 1726 155 14 21 chr18 48710364 48710655 -37966893 + AluJo SINE Alu 16 304 -8 2442 94 3 0 chr18 48710657 48710964 -37966584 + AluSg SINE Alu 3 310 0 186 258 135 22 chr18 48711461 48711550 -37965998 + MIR SINE MIR 40 138 -124 462 274 144 44 chr18 48711949 48712380 -37965168 + HAL1 LINE L1 56 529 -1978 764 234 68 15 chr18 48713377 48713582 -37963966 - MIR SINE MIR -1 261 46 1180 232 83 156 chr18 48713748 48714076 -37963472 + L2 LINE L2 2257 2607 -706 457 175 12 0 chr18 48714076 48714156 -37963392 + MER2 DNA MER2_type 1 81 -264 1180 232 83 156 chr18 48714156 48714830 -37962718 + L2 LINE L2 2607 3253 -60 215 290 10 0 chr18 48715293 48715393 -37962155 + (CCCA)n Simple_repeat Simple_repeat 3 103 0 453 115 0 0 chr18 48715396 48715474 -37962074 + (CAGC)n Simple_repeat Simple_repeat 1 78 0 954 163 0 0 chr18 48715507 48715722 -37961826 + (TCCA)n Simple_repeat Simple_repeat 1 215 0 933 168 0 0 chr18 48715747 48715926 -37961622 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 475 319 85 42 chr18 48715933 48716193 -37961355 - L2 LINE L2 0 3272 3002 3096 196 129 0 chr18 48716227 48716919 -37960629 + L1M2b LINE L1 1 781 -6428 2340 143 13 0 chr18 48716923 48717308 -37960240 + L1MA4 LINE L1 5910 6299 -1 1921 136 0 7 chr18 48717329 48717608 -37959940 + AluSx SINE Alu 36 312 0 327 274 4 12 chr18 48718736 48718998 -37958550 + (CA)n Simple_repeat Simple_repeat 1 259 0 392 272 11 38 chr18 48719023 48719207 -37958341 + (CA)n Simple_repeat Simple_repeat 1 179 0 889 228 26 40 chr18 48719528 48719756 -37957792 - MIR SINE MIR -25 237 13 351 190 160 20 chr18 48721579 48721679 -37955869 + L2 LINE L2 2415 2528 -786 826 87 0 0 chr18 48721686 48721789 -37955759 - AluSg1 SINE Alu -206 103 1 1046 269 37 58 chr18 48721789 48722119 -37955429 + L2 LINE L2 2518 2841 -473 1681 204 3 25 chr18 48722119 48722438 -37955110 - AluJo SINE Alu 0 312 1 1046 269 37 58 chr18 48722438 48722483 -37955065 + L2 LINE L2 2841 2885 -429 300 111 0 0 chr18 48722663 48722708 -37954840 + (TG)n Simple_repeat Simple_repeat 2 46 0 484 333 24 6 chr18 48722920 48723088 -37954460 + MIR3 SINE MIR 32 202 -6 192 40 0 0 chr18 48723204 48723229 -37954319 + (A)n Simple_repeat Simple_repeat 1 25 0 248 294 126 25 chr18 48723262 48723381 -37954167 - MIR SINE MIR -51 211 81 362 269 28 28 chr18 48723830 48723971 -37953577 - L1MB5 LINE L1 -252 5922 5782 378 251 135 43 chr18 48724119 48724326 -37953222 + L1ME4a LINE L1 5875 6100 -21 189 306 14 42 chr18 48724979 48725051 -37952497 - MIR SINE MIR -140 122 53 1543 193 41 33 chr18 48725648 48726011 -37951537 + MLT1A2 LTR MaLR 1 366 -8 2067 148 17 14 chr18 48727714 48728065 -37949483 + MLT1A1 LTR MaLR 12 363 -2 259 187 27 107 chr18 48728278 48728353 -37949195 + L2 LINE L2 3193 3261 -11 627 246 57 58 chr18 48729222 48729534 -37948014 + L2 LINE L2 2771 3087 -226 196 333 119 16 chr18 48730397 48730523 -37947025 + L3 LINE CR1 657 795 -782 201 316 132 49 chr18 48730597 48730885 -37946663 + L3 LINE CR1 930 1241 -336 714 285 44 41 chr18 48731070 48731386 -37946162 + MLT1K LTR MaLR 267 583 -5 519 219 84 39 chr18 48731673 48731828 -37945720 + MLT1J2 LTR MaLR 281 442 -8 443 306 40 0 chr18 48732642 48732766 -37944782 + MIR3 SINE MIR 54 182 -26 682 281 36 86 chr18 48733011 48733314 -37944234 + L2 LINE L2 2985 3272 0 2403 81 3 0 chr18 48733917 48734214 -37943334 - AluSp SINE Alu -14 299 2 452 258 5 33 chr18 48734633 48734755 -37942793 - MER5B DNA MER1_type -55 134 5 * 893 231 23 0 chr18 48734751 48734924 -37942624 - MER5A DNA MER1_type -12 177 1 2149 126 64 14 chr18 48735710 48736067 -37941481 - THE1C LTR MaLR 0 375 1 406 276 107 12 chr18 48736147 48736397 -37941151 - L1MC4a LINE L1 -337 5826 5660 946 322 60 20 chr18 48736397 48736972 -37940576 + L2 LINE L2 2713 3309 -4 354 261 180 31 chr18 48738043 48738183 -37939365 + MIR3 SINE MIR 23 191 -17 339 95 270 0 chr18 48738183 48738246 -37939302 - MADE1 DNA Mariner 0 80 1 354 261 180 31 chr18 48738246 48738266 -37939282 + MIR3 SINE MIR 191 207 -1 2328 42 67 0 chr18 48738290 48738461 -37939087 - AluY SINE Alu -8 303 104 189 0 0 0 chr18 48738461 48738482 -37939066 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 2328 42 67 0 chr18 48738482 48738594 -37938954 - AluY SINE Alu -207 104 1 499 224 37 25 chr18 48738754 48738915 -37938633 + L1MC5 LINE L1 7038 7200 -761 355 301 74 49 chr18 48739131 48739269 -37938279 + L1MC5 LINE L1 7576 7722 -239 1658 108 0 0 chr18 48739269 48739483 -37938065 + AluSg/x SINE Alu 81 294 -18 355 301 74 49 chr18 48739483 48739547 -37938001 + L1MC5 LINE L1 7722 7783 -178 359 161 0 35 chr18 48739660 48739747 -37937801 + L1MC5 LINE L1 7830 7913 -48 2257 120 0 0 chr18 48740160 48740468 -37937080 + AluSx SINE Alu 1 308 -4 275 295 72 29 chr18 48741091 48741230 -37936318 - L2 LINE L2 -8 3305 3161 1372 221 54 50 chr18 48741837 48742302 -37935246 - MLT1C LTR MaLR 0 467 1 377 300 116 92 chr18 48742481 48742774 -37934774 - L2 LINE L2 0 3272 2973 188 35 35 0 chr18 48743091 48743120 -37934428 + (TG)n Simple_repeat Simple_repeat 1 30 0 226 254 18 0 chr18 48743513 48743568 -37933980 + CT-rich Low_complexity Low_complexity 5 60 0 488 361 132 29 chr18 48743862 48744560 -37932988 + L2 LINE L2 2496 3255 -17 3394 189 23 28 chr18 48744562 48745217 -37932331 - MER82 DNA MER2_type -1 652 1 298 189 0 0 chr18 48746478 48746531 -37931017 - MIR SINE MIR -6 256 204 280 309 12 99 chr18 48747333 48747495 -37930053 + MIR3 SINE MIR 1 148 -60 1943 151 33 10 chr18 48747540 48747845 -37929703 - AluJb SINE Alu 0 312 1 1988 148 3 7 chr18 48748623 48748921 -37928627 - AluJo SINE Alu -14 298 2 913 196 84 105 chr18 48751685 48752080 -37925468 + MLT1B LTR MaLR 1 365 0 238 297 141 33 chr18 48753452 48753626 -37923922 + MIR3 SINE MIR 10 193 -69 309 252 5 0 chr18 48753694 48753766 -37923782 + MER91B DNA MER1_type 1 75 -65 3781 140 62 35 chr18 48755346 48756054 -37921494 + LTR8A LTR ERV1 1 727 0 466 298 0 0 chr18 48756275 48756426 -37921122 + L1ME3A LINE L1 5792 5942 -228 238 302 0 0 chr18 48756669 48756722 -37920826 - L3 LINE CR1 -368 1209 1157 1788 199 53 57 chr18 48756744 48757251 -37920297 + MLT1D LTR MaLR 1 505 0 1108 217 111 23 chr18 48759163 48759579 -37917969 + MER89 LTR ERV1 4 557 -2 766 253 64 20 chr18 48759586 48759788 -37917760 + MIR SINE MIR 52 262 0 393 246 0 0 chr18 48760001 48760135 -37917413 + (CAT)n Simple_repeat Simple_repeat 1 134 0 639 237 0 8 chr18 48760157 48760415 -37917133 + (CAT)n Simple_repeat Simple_repeat 1 256 0 669 274 78 22 chr18 48760759 48760989 -37916559 + MIR SINE MIR 13 255 -7 292 301 58 10 chr18 48761014 48761117 -37916431 + L2 LINE L2 3199 3306 -7 819 212 12 2 chr18 48761117 48761308 -37916240 - L1MD3 LINE L1 -1 7981 7608 295 264 69 42 chr18 48762002 48762146 -37915402 + MIR SINE MIR 2 149 -113 257 384 58 0 chr18 48763960 48764046 -37913502 - MIR3 SINE MIR -105 103 13 312 236 135 0 chr18 48764295 48764384 -37913164 - MIR SINE MIR -75 133 33 2030 183 93 11 chr18 48764852 48765323 -37912225 + MLT1E1 LTR MaLR 145 654 0 186 343 29 0 chr18 48765329 48765399 -37912149 - MIR SINE MIR -115 147 76 222 264 82 82 chr18 48765806 48765965 -37911583 - L3 LINE CR1 -7 1570 1412 2459 92 3 0 chr18 48766384 48766687 -37910861 - AluSp SINE Alu -9 304 1 841 233 77 52 chr18 48766721 48767008 -37910540 + MLT1J LTR MaLR 218 511 0 271 267 82 74 chr18 48767459 48767594 -37909954 - MIR3 SINE MIR -64 144 9 278 336 10 10 chr18 48767671 48767775 -37909773 + MIR SINE MIR 103 206 -56 326 340 53 13 chr18 48769197 48769347 -37908201 - L2 LINE L2 -15 3257 3102 334 287 115 0 chr18 48769570 48769727 -37907821 + L1ME LINE L1 5600 5774 -347 191 312 73 55 chr18 48770373 48770482 -37907066 - MIR SINE MIR -58 150 40 202 283 0 0 chr18 48770645 48770698 -37906850 - L2 LINE L2 0 3313 3261 731 274 86 0 chr18 48770857 48771043 -37906505 - MIR SINE MIR -34 228 27 222 200 60 0 chr18 48771886 48771936 -37905612 - MIR3 SINE MIR -3 205 153 359 192 169 39 chr18 48772138 48772268 -37905280 - MIR3 SINE MIR -60 148 2 183 294 181 58 chr18 48774194 48774554 -37902994 + L2 LINE L2 2007 2410 -904 390 289 40 13 chr18 48775654 48775806 -37901742 - MARNA DNA Mariner -199 387 232 195 256 175 50 chr18 48775866 48776026 -37901522 - L2 LINE L2 -1143 2171 1992 516 306 7 14 chr18 48776362 48776506 -37901042 + MIR SINE MIR 23 165 -97 181 276 105 38 chr18 48776975 48777080 -37900468 - MER5B DNA MER1_type -27 151 40 1871 127 75 8 chr18 48777083 48777370 -37900178 + AluSx SINE Alu 1 305 0 473 291 113 89 chr18 48778308 48778734 -37898814 + L2 LINE L2 2836 3271 -1 192 271 0 71 chr18 48778739 48778809 -37898739 + MIR SINE MIR 123 187 -75 255 31 0 0 chr18 48779018 48779050 -37898498 + (TTG)n Simple_repeat Simple_repeat 1 32 0 2091 77 0 8 chr18 48779050 48779310 -37898238 - AluSq SINE Alu -53 260 3 865 256 45 5 chr18 48779460 48779683 -37897865 + MIR SINE MIR 31 262 0 196 306 122 31 chr18 48779716 48779814 -37897734 - MIR SINE MIR -86 122 16 431 220 92 40 chr18 48780436 48780609 -37896939 + L2 LINE L2 2878 3059 -213 593 298 79 0 chr18 48780661 48780839 -37896709 + MIR SINE MIR 19 210 -52 192 285 41 65 chr18 48780892 48781015 -37896533 + L2 LINE L2 3125 3244 -28 450 267 69 15 chr18 48782039 48782170 -37895378 + MIR SINE MIR 5 142 -120 2118 144 0 0 chr18 48782620 48782912 -37894636 + AluSx SINE Alu 1 292 -20 397 221 49 93 chr18 48783028 48783232 -37894316 - MER112 DNA MER1_type -18 242 48 868 272 71 5 chr18 48783451 48783675 -37893873 - MIR SINE MIR 0 262 24 207 0 0 0 chr18 48784096 48784119 -37893429 + (T)n Simple_repeat Simple_repeat 1 23 0 285 331 11 0 chr18 48784918 48785029 -37892519 - MIR SINE MIR -70 138 43 476 180 67 0 chr18 48785787 48785876 -37891672 + MER5A DNA MER1_type 95 189 0 333 246 0 118 chr18 48785888 48785998 -37891550 + MER5B DNA MER1_type 5 101 -77 2486 87 21 16 chr18 48786469 48786849 -37890699 - L1PB2 LINE L1 -1 6150 5769 1583 104 0 0 chr18 48786866 48787086 -37890462 - L1PA7 LINE L1 -7 6147 5928 680 294 30 17 chr18 48787597 48787832 -37889716 + MIR SINE MIR 10 247 -15 975 247 38 13 chr18 48787957 48788196 -37889352 - MIR SINE MIR -3 259 15 2719 3 0 0 chr18 48789065 48789365 -37888183 - AluYa5 SINE Alu -6 305 6 990 162 3 3 chr18 48789713 48790071 -37887477 + (CATTC)n Satellite Satellite 1 359 0 206 209 0 0 chr18 48790873 48790916 -37886632 + L2 LINE L2 3271 3313 0 370 241 36 54 chr18 48791101 48791213 -37886335 + MIR SINE MIR 9 118 -144 679 168 71 19 chr18 48791215 48791370 -37886178 + MER53 DNA DNA 1 163 -26 524 218 75 0 chr18 48791378 48791511 -37886037 + MIR SINE MIR 111 253 -9 320 266 21 21 chr18 48792107 48792250 -37885298 + (CAGAGA)n Simple_repeat Simple_repeat 2 144 0 357 311 183 28 chr18 48792897 48793077 -37884471 + MIR3 SINE MIR 1 208 0 2749 13 0 0 chr18 48793732 48794042 -37883506 + AluYb8 SINE Alu 1 310 -8 725 234 78 48 chr18 48794042 48794273 -37883275 + MLT1I LTR MaLR 172 409 0 190 343 0 0 chr18 48794273 48794340 -37883208 - L2 LINE L2 -1075 2239 2173 218 277 96 48 chr18 48794346 48794429 -37883119 + L2 LINE L2 3136 3222 -50 187 305 117 90 chr18 48794454 48794532 -37883016 - L3 LINE CR1 -322 1255 1181 2291 93 0 3 chr18 48794532 48794843 -37882705 - AluY SINE Alu -1 310 1 187 305 117 90 chr18 48794843 48795020 -37882528 - L3 LINE CR1 -396 1181 993 2492 123 8 3 chr18 48795271 48795661 -37881887 + L1MB2 LINE L1 5773 6164 -7 189 0 0 0 chr18 48795695 48795716 -37881832 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 486 343 55 0 chr18 48796693 48796874 -37880674 - MIR SINE MIR -37 225 35 1151 257 192 24 chr18 48797003 48797725 -37879823 - L2 LINE L2 0 3313 2461 295 264 0 28 chr18 48798082 48798154 -37879394 + G-rich Low_complexity Low_complexity 5 74 0 273 305 117 13 chr18 48798155 48798394 -37879154 + L1M4 LINE L1 4357 4620 -1526 381 328 25 4 chr18 48798629 48798821 -37878727 - MIR SINE MIR -39 223 27 233 176 0 78 chr18 48799012 48799063 -37878485 - L2 LINE L2 -5 3308 3262 194 222 127 16 chr18 48799229 48799292 -37878256 + MIR SINE MIR 49 118 -90 705 216 33 0 chr18 48799361 48799514 -37878034 + MER58 DNA MER1_type 1 158 -2262 267 48 48 0 chr18 48799767 48799809 -37877739 - MER58 DNA MER1_type -2251 169 126 712 203 49 0 chr18 48799810 48799953 -37877595 + MER58B DNA MER1_type 192 341 0 211 255 16 85 chr18 48800475 48800663 -37876885 + C-rich Low_complexity Low_complexity 4 178 0 202 288 48 16 chr18 48800719 48800844 -37876704 + C-rich Low_complexity Low_complexity 1 129 0 989 234 33 55 chr18 48801775 48802139 -37875409 - L1MC4 LINE L1 0 8042 7687 234 128 0 0 chr18 48803888 48803927 -37873621 + (TCC)n Simple_repeat Simple_repeat 2 40 0 185 207 0 17 chr18 48803954 48804012 -37873536 + CT-rich Low_complexity Low_complexity 2 58 0 242 265 0 0 chr18 48804497 48804546 -37873002 + (CACG)n Simple_repeat Simple_repeat 1 49 0 221 266 62 55 chr18 48805239 48805367 -37872181 - MIR3 SINE MIR -53 155 27 242 248 51 95 chr18 48805690 48805827 -37871721 - MIR SINE MIR -36 226 96 212 221 128 35 chr18 48805825 48805911 -37871637 + MIR3 SINE MIR 115 208 0 * 482 251 28 50 chr18 48806377 48806556 -37870992 - MER5B DNA MER1_type -3 175 1 260 235 44 29 chr18 48806556 48806624 -37870924 - MIR3 SINE MIR -48 160 92 381 255 117 7 chr18 48806965 48807110 -37870438 - MIR SINE MIR 0 262 102 576 210 0 0 chr18 48807226 48807326 -37870222 + MSTC LTR MaLR 1 100 -328 * 930 149 46 26 chr18 48807324 48807519 -37870029 + MLT1B LTR MaLR 21 219 -171 681 238 88 79 chr18 48807613 48807772 -37869776 + HAL1 LINE L1 2028 2184 -323 225 0 0 0 chr18 48807772 48807797 -37869751 + (TG)n Simple_repeat Simple_repeat 1 25 0 681 238 88 79 chr18 48807797 48807917 -37869631 + HAL1 LINE L1 2184 2301 -206 1591 153 10 42 chr18 48807917 48808230 -37869318 + AluJo SINE Alu 1 303 -9 681 238 88 79 chr18 48808230 48808356 -37869192 + HAL1 LINE L1 2301 2438 -69 2068 110 10 0 chr18 48808660 48808950 -37868598 + AluSx SINE Alu 1 293 -19 562 271 134 36 chr18 48808980 48809231 -37868317 + L2 LINE L2 3010 3292 -21 2016 138 49 0 chr18 48809231 48809557 -37867991 + MER2 DNA MER2_type 3 344 0 562 271 134 36 chr18 48809557 48809582 -37867966 + L2 LINE L2 3292 3313 0 262 170 21 0 chr18 48809707 48809754 -37867794 + MIR SINE MIR 98 145 -63 279 259 49 37 chr18 48810852 48810933 -37866615 + L3 LINE CR1 1485 1566 -11 455 273 215 14 chr18 48811342 48811551 -37865997 - MIR SINE MIR -10 252 2 2479 181 46 27 chr18 48812033 48812559 -37864989 + MER67A LTR ERV1 6 541 -2 402 306 83 19 chr18 48812559 48812716 -37864832 + MER5A DNA MER1_type 16 182 -7 198 171 0 0 chr18 48813013 48813054 -37864494 + (TG)n Simple_repeat Simple_repeat 1 41 0 204 326 181 22 chr18 48813421 48813559 -37863989 + MIR3 SINE MIR 22 181 -27 190 290 54 54 chr18 48813605 48813698 -37863850 - MIR3 SINE MIR -7 201 109 1544 88 70 0 chr18 48814325 48814540 -37863008 + MER30 DNA MER1_type 1 230 0 1729 179 0 6 chr18 48814866 48815178 -37862370 + AluJo SINE Alu 2 311 -1 191 373 0 20 chr18 48815181 48815283 -37862265 + MIR SINE MIR 103 202 -60 260 345 138 0 chr18 48816123 48816297 -37861251 - L2 LINE L2 -340 2974 2777 1996 58 8 4 chr18 48816465 48816726 -37860822 + AluY SINE Alu 44 305 -6 321 26 0 0 chr18 48818264 48818302 -37859246 + (CA)n Simple_repeat Simple_repeat 2 39 0 21 0 0 0 chr18 48818496 48818517 -37859031 + AT_rich Low_complexity Low_complexity 1 21 0 306 290 179 44 chr18 48818805 48819236 -37858312 + L2 LINE L2 2090 2598 -716 1784 221 70 18 chr18 48819236 48819680 -37857868 + MLT1C LTR MaLR 1 467 0 306 290 179 44 chr18 48819680 48819744 -37857804 + L2 LINE L2 2598 2652 -662 336 308 75 13 chr18 48822641 48822800 -37854748 - MIR SINE MIR -5 257 89 308 364 11 43 chr18 48823925 48824109 -37853439 + MER5B DNA MER1_type 1 178 0 199 196 18 71 chr18 48824425 48824481 -37853067 - L2 LINE L2 0 3313 3261 1723 265 77 67 chr18 48824718 48825468 -37852080 - L2 LINE L2 -367 2947 2190 2016 235 125 58 chr18 48825468 48826539 -37851009 + L1MB7 LINE L1 1284 2430 -3952 1379 230 96 16 chr18 48826539 48826926 -37850622 - LTR52 LTR ERVL -3 418 1 2016 235 125 58 chr18 48826926 48827024 -37850524 + L1MB7 LINE L1 2430 2520 -3862 5650 151 9 54 chr18 48827090 48828416 -37849132 + L1MA6 LINE L1 5029 6300 0 4982 210 38 11 chr18 48828435 48829616 -37847932 + L1MB7 LINE L1 3711 4923 -1459 3472 167 47 10 chr18 48829621 48830308 -37847240 + L1MB7 LINE L1 5697 6408 -12 2017 116 0 3 chr18 48830308 48830624 -37846924 - AluSq SINE Alu 0 315 1 3000 76 67 0 chr18 48832931 48833337 -37844211 + LTR3b LTR ERVK 1 433 -4 453 359 17 11 chr18 48833385 48833566 -37843982 - MER5A DNA MER1_type 0 189 8 686 139 73 29 chr18 48833575 48833712 -37843836 + MLT1B LTR MaLR 1 143 -247 196 282 47 82 chr18 48833717 48833802 -37843746 - L2 LINE L2 -2906 408 327 411 260 110 66 chr18 48833902 48833991 -37843557 + HAL1 LINE L1 115 199 -2308 1039 195 22 0 chr18 48833991 48834176 -37843372 + MER5A DNA MER1_type 1 189 0 411 260 110 66 chr18 48834176 48834359 -37843189 + HAL1 LINE L1 199 399 -2108 328 109 0 0 chr18 48834442 48834488 -37843060 + MADE1 DNA Mariner 1 46 -34 308 295 202 12 chr18 48834585 48834758 -37842790 + MIR3 SINE MIR 3 208 0 582 236 103 6 chr18 48835099 48835273 -37842275 + MER117 DNA MER1_type 1 191 -6 338 265 40 66 chr18 48839322 48839473 -37838075 - MIR3 SINE MIR -48 160 14 631 329 63 36 chr18 48840096 48840543 -37837005 + L1ME4a LINE L1 326 784 -5632 324 256 65 57 chr18 48840698 48840920 -37836628 + L1ME4a LINE L1 1705 2028 -4531 258 265 54 10 chr18 48841201 48841355 -37836193 + L1ME4a LINE L1 2451 2776 -3650 318 50 0 0 chr18 48841407 48841447 -37836101 + (CA)n Simple_repeat Simple_repeat 2 41 0 1617 271 69 91 chr18 48841478 48841624 -37835924 + L1ME4a LINE L1 3831 3979 -2471 2180 94 10 36 chr18 48841624 48841931 -37835617 - AluY SINE Alu -12 299 1 1617 271 69 91 chr18 48841931 48844170 -37833378 + L1ME4a LINE L1 3979 6161 -289 2250 93 7 3 chr18 48844182 48844472 -37833076 + AluSx SINE Alu 1 291 -21 243 88 0 0 chr18 48844472 48844506 -37833042 + (GGAA)n Simple_repeat Simple_repeat 1 34 0 2156 151 0 0 chr18 48846060 48846372 -37831176 - AluSx SINE Alu 0 312 1 199 152 0 0 chr18 48846574 48846607 -37830941 - MIR SINE MIR -9 253 221 227 351 0 9 chr18 48847118 48847229 -37830319 + GA-rich Low_complexity Low_complexity 2 111 0 703 251 32 5 chr18 48847467 48847654 -37829894 + MIR SINE MIR 55 246 -16 245 188 31 31 chr18 48848803 48848867 -37828681 + L1MA9 LINE L1 6210 6273 -39 2198 91 47 3 chr18 48849112 48849408 -37828140 + AluY SINE Alu 1 309 -2 299 287 101 0 chr18 48850057 48850186 -37827362 + L1ME LINE L1 5580 5721 -400 189 0 0 0 chr18 48850208 48850229 -37827319 + (CA)n Simple_repeat Simple_repeat 2 22 0 2274 127 14 3 chr18 48850229 48850584 -37826964 + MER46B DNA MER2_type 3 236 0 2141 121 0 10 chr18 48850750 48851048 -37826500 + AluSx SINE Alu 1 295 -17 287 250 23 0 chr18 48851187 48851275 -37826273 - L1MC4 LINE L1 -1339 6686 6597 509 176 107 13 chr18 48851357 48851516 -37826032 + L1ME4a LINE L1 6226 6399 -2 330 267 63 99 chr18 48851816 48851890 -37825658 + HAL1b LINE L1 232 307 -1041 567 43 0 0 chr18 48851890 48851960 -37825588 + (GGAA)n Simple_repeat Simple_repeat 1 70 0 330 267 63 99 chr18 48851960 48852218 -37825330 + HAL1b LINE L1 307 552 -796 283 241 28 17 chr18 48852815 48852899 -37824649 + MLT1J LTR MaLR 60 180 -308 361 239 84 127 chr18 48852985 48853269 -37824279 + MLT1J LTR MaLR 232 503 -8 2595 54 3 0 chr18 48854087 48854402 -37823146 + L1PA6 LINE L1 5813 6128 -26 430 292 61 0 chr18 48855258 48855424 -37822124 - MIR SINE MIR -57 151 6 23 0 0 0 chr18 48855491 48855514 -37822034 + AT_rich Low_complexity Low_complexity 1 23 0 831 298 72 34 chr18 48855859 48856426 -37821122 - L1MC4 LINE L1 -1905 5886 5298 1566 300 91 40 chr18 48856462 48857823 -37819725 - L1MC4 LINE L1 -984 5145 3685 6375 51 0 0 chr18 48857823 48858614 -37818934 + L1PA5 LINE L1 5380 6170 0 1566 300 91 40 chr18 48858614 48858871 -37818677 - L1MC4 LINE L1 -2444 3685 3443 818 287 100 33 chr18 48859336 48859964 -37817584 - L1MC4 LINE L1 -3235 2894 2225 301 287 132 18 chr18 48860044 48860211 -37817337 - L1MC4 LINE L1 -4189 2121 1936 334 290 98 30 chr18 48860455 48860922 -37816626 - L1MC4 LINE L1 -4501 1628 658 992 290 76 57 chr18 48860940 48861533 -37816015 - L1MC4 LINE L1 -5511 608 5 256 270 54 0 chr18 48862520 48862631 -37814917 + L2 LINE L2 2575 2691 -623 481 283 60 81 chr18 48864355 48864638 -37812910 + L3 LINE CR1 1294 1570 -7 330 330 17 56 chr18 48865806 48865985 -37811563 - MIR SINE MIR -71 191 20 1586 186 16 31 chr18 48866020 48866343 -37811205 - MER58B DNA MER1_type -3 338 21 827 221 0 50 chr18 48866980 48867179 -37810369 - MER91B DNA MER1_type 0 190 2 244 213 27 40 chr18 48868626 48868701 -37808847 + CT-rich Low_complexity Low_complexity 4 77 0 351 269 81 38 chr18 48868828 48868988 -37808560 - MIR SINE MIR -56 206 40 1567 119 18 4 chr18 48869256 48869483 -37808065 + MER30 DNA MER1_type 1 230 0 762 245 104 60 chr18 48869863 48870134 -37807414 + L1ME4a LINE L1 5557 5855 -266 1791 153 51 3 chr18 48870134 48870428 -37807120 + AluSx SINE Alu 1 308 -4 762 245 104 60 chr18 48870428 48870588 -37806960 + L1ME4a LINE L1 5855 6007 -114 357 271 71 29 chr18 48870611 48870751 -37806797 + MIR SINE MIR 45 190 -72 280 326 106 44 chr18 48871625 48871898 -37805650 + L2 LINE L2 2983 3272 0 353 294 113 19 chr18 48871927 48872087 -37805461 + MIR3 SINE MIR 24 198 -10 456 295 92 10 chr18 48872620 48872827 -37804721 - MIR SINE MIR -12 250 27 369 289 72 13 chr18 48873003 48873155 -37804393 - MIR3 SINE MIR -27 181 21 267 103 0 0 chr18 48873657 48873696 -37803852 + (A)n Simple_repeat Simple_repeat 1 39 0 372 280 80 7 chr18 48874703 48874853 -37802695 - MIR3 SINE MIR -4 204 44 309 243 28 47 chr18 48876063 48876170 -37801378 - MIR SINE MIR -157 105 1 320 138 52 0 chr18 48876199 48876257 -37801291 + L2 LINE L2 3137 3197 -75 4846 171 43 9 chr18 48877012 48878224 -37799324 + L1MB3 LINE L1 4662 5934 -249 1802 173 22 25 chr18 48878224 48878583 -37798965 + MER46B DNA MER2_type 4 236 0 4846 171 43 9 chr18 48878583 48878835 -37798713 + L1MB3 LINE L1 5934 6176 -7 186 394 11 0 chr18 48879119 48879213 -37798335 + L3 LINE CR1 1454 1548 -29 335 301 16 32 chr18 48879277 48879400 -37798148 + MIR3 SINE MIR 15 135 -73 490 209 66 55 chr18 48879563 48879745 -37797803 - MER113 DNA MER1_type? -330 191 8 2227 118 0 13 chr18 48880730 48881045 -37796503 + AluSp SINE Alu 3 313 0 183 42 0 0 chr18 48881483 48881507 -37796041 + (CA)n Simple_repeat Simple_repeat 1 24 0 1165 266 78 26 chr18 48881527 48881986 -37795562 + L1ME4a LINE L1 5381 5863 -258 366 258 97 19 chr18 48882027 48882182 -37795366 + L1ME4a LINE L1 5955 6121 0 2271 119 0 3 chr18 48882210 48882522 -37795026 + AluSq SINE Alu 1 311 -2 286 122 20 0 chr18 48883776 48883825 -37793723 + MIR SINE MIR 99 148 -114 1229 199 66 14 chr18 48884342 48884628 -37792920 - MER33 DNA MER1_type -23 301 1 191 214 36 36 chr18 48884861 48884917 -37792631 + L2 LINE L2 3201 3256 -16 817 232 138 5 chr18 48885351 48885575 -37791973 - MIR SINE MIR -8 254 1 243 289 0 26 chr18 48886171 48886247 -37791301 - MIR3 SINE MIR -120 88 15 241 271 134 46 chr18 48887663 48887969 -37789579 + L1ME4a LINE L1 5787 6119 -2 261 268 196 12 chr18 48888063 48888231 -37789317 - MARNA DNA Mariner -230 356 158 1688 185 3 17 chr18 48888301 48888603 -37788945 + AluJo SINE Alu 4 301 -11 2269 131 0 3 chr18 48891837 48892150 -37785398 + AluSx SINE Alu 1 312 0 208 365 112 9 chr18 48892165 48892272 -37785276 + MIR3 SINE MIR 42 159 -49 184 299 22 9 chr18 48892626 48892748 -37784800 - MIR SINE MIR -71 137 67 405 331 160 42 chr18 48893768 48894224 -37783324 - LTR67 LTR ERVL -8 549 40 274 286 66 0 chr18 48894297 48894388 -37783160 - MIR SINE MIR 0 262 166 284 303 215 10 chr18 48894675 48894870 -37782678 + MIR SINE MIR 15 249 -13 182 397 60 0 chr18 48895302 48895418 -37782130 + L3 LINE CR1 1104 1226 -351 391 239 178 0 chr18 48895499 48895662 -37781886 + L1ME3 LINE L1 5111 5302 -844 2033 225 67 14 chr18 48895691 48896243 -37781305 + L1ME1 LINE L1 5581 6161 -5 * 2326 239 114 24 chr18 48896242 48896828 -37780720 + L1ME3 LINE L1 5313 5977 -185 2246 105 10 13 chr18 48896828 48897132 -37780416 + AluSg SINE Alu 1 303 -7 2326 239 114 24 chr18 48897132 48897262 -37780286 + L1ME3 LINE L1 5977 6094 -68 220 200 0 0 chr18 48897513 48897558 -37779990 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 431 307 87 7 chr18 48897559 48897709 -37779839 + MIR SINE MIR 34 195 -67 237 273 0 0 chr18 48897724 48897779 -37779769 + L1MC/D LINE L1 5610 5664 -2144 1095 190 190 22 chr18 48897835 48898146 -37779402 + MLT1A1 LTR MaLR 1 363 -2 269 348 17 0 chr18 48898206 48898324 -37779224 + L3 LINE CR1 1452 1571 -6 957 237 39 0 chr18 48898774 48898981 -37778567 + MIR SINE MIR 20 234 -28 248 228 17 0 chr18 48899067 48899133 -37778415 + MIR SINE MIR 84 143 -65 204 97 0 0 chr18 48899884 48899915 -37777633 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 577 256 56 6 chr18 48901791 48901951 -37775597 - MER5B DNA MER1_type -10 168 1 2517 59 0 0 chr18 48902463 48902751 -37774797 - AluSg SINE Alu -22 288 1 2151 161 9 62 chr18 48902854 48903290 -37774258 - MLT2B3 LTR ERVL 0 554 142 1903 237 54 15 chr18 48903327 48903786 -37773762 + L1ME1 LINE L1 5485 5968 -198 1585 180 44 34 chr18 48903786 48904081 -37773467 + AluJo SINE Alu 5 302 -10 1903 237 54 15 chr18 48904081 48904140 -37773408 + L1ME1 LINE L1 5968 6023 -143 1066 256 192 15 chr18 48904745 48905213 -37772335 - LTR67 LTR ERVL -4 553 3 248 132 19 38 chr18 48905461 48905514 -37772034 - MLT1H LTR MaLR -224 366 315 2429 190 49 37 chr18 48905578 48906174 -37771374 + LTR26 LTR ERV1 1 603 0 423 256 83 42 chr18 48906296 48906464 -37771084 - MLT1H LTR MaLR -374 175 1 319 261 101 38 chr18 48906876 48907114 -37770434 + L2 LINE L2 2647 2899 -415 1488 176 105 0 chr18 48908585 48908852 -37768696 + AluJo SINE Alu 1 295 -17 256 337 78 24 chr18 48909127 48909510 -37768038 + L2 LINE L2 2459 2862 -452 210 340 27 27 chr18 48909725 48909872 -37767676 + L2 LINE L2 3166 3312 -1 1936 183 0 0 chr18 48910023 48910335 -37767213 + AluJb SINE Alu 1 312 0 261 151 0 0 chr18 48911606 48911659 -37765889 + (CA)n Simple_repeat Simple_repeat 2 54 0 2240 96 7 3 chr18 48913650 48913942 -37763606 + AluSg SINE Alu 1 293 -17 1634 169 69 14 chr18 48914298 48914588 -37762960 - AluJb SINE Alu -4 308 3 583 191 191 0 chr18 48915775 48915927 -37761621 + MER5A DNA MER1_type 9 189 0 724 245 31 0 chr18 48915936 48916095 -37761453 + MER5B DNA MER1_type 2 165 -13 407 260 35 46 chr18 48916117 48916290 -37761258 + MER5B DNA MER1_type 2 172 -6 1754 143 3 7 chr18 48916801 48917108 -37760440 + L1MB2 LINE L1 5864 6169 -2 233 114 23 23 chr18 48917421 48917465 -37760083 + MER5A DNA MER1_type 127 170 -19 199 333 0 0 chr18 48917422 48917482 -37760066 - MER5A DNA MER1_type -116 73 14 * 196 409 19 0 chr18 48918933 48919092 -37758456 - L2 LINE L2 -720 2594 2433 335 341 54 6 chr18 48919103 48919270 -37758278 - MIR SINE MIR -21 241 67 306 296 158 57 chr18 48919308 48919634 -37757914 - L2 LINE L2 -959 2355 1983 1839 167 3 23 chr18 48919634 48919934 -37757614 + AluJo SINE Alu 7 300 -12 306 296 158 57 chr18 48919934 48919992 -37757556 - L2 LINE L2 -1331 1983 1932 394 260 39 0 chr18 48920177 48920281 -37757267 + L2 LINE L2 3189 3296 -17 211 283 0 0 chr18 48920236 48920289 -37757259 + MIR SINE MIR 207 259 -3 * 385 201 103 115 chr18 48920748 48920922 -37756626 + MIR3 SINE MIR 10 181 -27 435 319 42 58 chr18 48921108 48921368 -37756180 + MIR SINE MIR 7 262 0 257 288 129 15 chr18 48921415 48921547 -37756001 - MIR3 SINE MIR -35 173 27 248 272 184 0 chr18 48921754 48921857 -37755691 + MIR3 SINE MIR 84 205 -3 269 219 14 0 chr18 48922500 48922573 -37754975 + GA-rich Low_complexity Low_complexity 4 77 0 1722 177 0 20 chr18 48924838 48925138 -37752410 - AluJo SINE Alu -18 294 1 1186 190 79 16 chr18 48925505 48925810 -37751738 - MER33 DNA MER1_type 0 324 1 217 316 79 0 chr18 48926241 48926317 -37751231 - L2 LINE L2 -192 3080 2999 1991 184 76 39 chr18 48926440 48926924 -37750624 + MLT1D LTR MaLR 3 504 -1 327 291 100 26 chr18 48927216 48927491 -37750057 - L2 LINE L2 -255 3017 2726 201 289 211 21 chr18 48927629 48927819 -37749729 - MIR SINE MIR -3 259 34 647 286 75 0 chr18 48928263 48928476 -37749072 - MIR SINE MIR -25 237 9 357 231 98 42 chr18 48928703 48928846 -37748702 - L2 LINE L2 -177 3095 2945 552 307 60 18 chr18 48928864 48929082 -37748466 - MIR SINE MIR -8 254 28 227 236 18 0 chr18 48929818 48929873 -37747675 - MIR SINE MIR -118 144 89 292 328 23 23 chr18 48930742 48930870 -37746678 + MER5A DNA MER1_type 4 139 -47 1358 232 12 23 chr18 48930933 48931278 -37746270 + MER58B DNA MER1_type 1 341 0 477 227 0 45 chr18 48932013 48932145 -37745403 + MLT1J LTR MaLR 377 502 -9 253 320 26 0 chr18 48932145 48932223 -37745325 - MIR3 SINE MIR -53 155 76 285 273 10 20 chr18 48933259 48933358 -37744190 + MIR SINE MIR 36 133 -75 2140 114 0 48 chr18 48933433 48933749 -37743799 - AluSx SINE Alu -11 301 1 2441 93 0 7 chr18 48934474 48934776 -37742772 - AluSx SINE Alu -12 300 1 189 311 40 14 chr18 48935742 48935816 -37741732 + MIR SINE MIR 117 192 -70 2012 150 7 3 chr18 48936253 48936559 -37740989 - AluSx SINE Alu -1 311 5 1664 197 140 36 chr18 48936568 48937061 -37740487 + MER74A LTR ERVL 14 557 -1 403 218 0 0 chr18 48937486 48937564 -37739984 + L2 LINE L2 3234 3311 -2 580 140 26 18 chr18 48938114 48938228 -37739320 + MER103 DNA DNA 3 117 -49 2495 86 0 0 chr18 48938737 48939038 -37738510 + AluSx SINE Alu 1 301 -11 710 337 4 35 chr18 48939187 48939445 -37738103 + MIR SINE MIR 11 260 -2 345 311 118 8 chr18 48939537 48939656 -37737892 + L2 LINE L2 3141 3272 0 880 290 93 3 chr18 48939728 48940028 -37737520 - L2 LINE L2 -56 3257 2931 362 238 18 18 chr18 48940369 48940477 -37737071 + MIR SINE MIR 43 149 -69 355 254 68 25 chr18 48940576 48940694 -37736854 + HAL1 LINE L1 10 132 -2375 21 0 0 0 chr18 48940983 48941004 -37736544 + AT_rich Low_complexity Low_complexity 1 21 0 263 229 82 0 chr18 48941077 48941138 -37736410 + HAL1 LINE L1 788 853 -1654 243 177 190 13 chr18 48941270 48941349 -37736199 + HAL1 LINE L1 1100 1192 -1315 1345 150 0 27 chr18 48941360 48941580 -37735968 + AluJo SINE Alu 83 296 -16 386 236 67 18 chr18 48941739 48941904 -37735644 + HAL1 LINE L1 1442 1614 -893 251 210 30 42 chr18 48941904 48942071 -37735477 + (CCAA)n Simple_repeat Simple_repeat 3 167 0 * 394 168 5 87 chr18 48942009 48942260 -37735288 + (CAA)n Simple_repeat Simple_repeat 1 230 0 296 215 9 19 chr18 48942285 48942392 -37735156 + (CCAA)n Simple_repeat Simple_repeat 1 106 0 316 327 137 0 chr18 48942404 48942682 -37734866 + HAL1 LINE L1 1575 1890 -617 269 275 46 30 chr18 48942747 48942878 -37734670 + HAL1 LINE L1 2020 2152 -355 246 311 40 26 chr18 48942937 48943088 -37734460 + HAL1b LINE L1 749 901 -447 2430 80 0 0 chr18 48943240 48943540 -37734008 - AluY SINE Alu -11 300 1 1630 188 12 49 chr18 48944900 48944992 -37732556 + MLT1B LTR MaLR 1 95 -295 2421 93 0 0 chr18 48944992 48945294 -37732254 - AluSx SINE Alu -2 310 9 1630 188 12 49 chr18 48945294 48945547 -37732001 + MLT1B LTR MaLR 95 333 -57 22 0 0 0 chr18 48945704 48945726 -37731822 + AT_rich Low_complexity Low_complexity 1 22 0 2224 116 0 3 chr18 48945729 48946032 -37731516 + AluSg SINE Alu 1 302 -8 445 284 91 39 chr18 48946216 48946674 -37730874 + L2 LINE L2 2699 3179 -93 1955 59 0 13 chr18 48946994 48947254 -37730294 - AluY SINE Alu 0 311 58 363 267 78 39 chr18 48947267 48947447 -37730101 - MIR SINE MIR -56 206 20 884 163 77 56 chr18 48948249 48948482 -37729066 - MLT1A1 LTR MaLR -127 238 1 290 324 28 14 chr18 48948547 48948828 -37728720 - L1M4 LINE L1 -1767 4615 4306 3931 176 70 16 chr18 48948842 48949652 -37727896 - L1MB8 LINE L1 0 6178 5325 2106 122 30 3 chr18 48949652 48949947 -37727601 - AluSq SINE Alu -10 303 1 36145 73 6 7 chr18 48949992 48955608 -37721940 - L1PA6 LINE L1 0 6154 550 1448 197 60 17 chr18 48955609 48955960 -37721588 - L1MB8 LINE L1 -814 5332 4967 2056 119 3 35 chr18 48956077 48956408 -37721140 - AluSx SINE Alu 0 312 1 872 255 154 52 chr18 48956420 48957301 -37720247 - L1M4 LINE L1 -2204 4178 3208 670 241 35 6 chr18 48957346 48957516 -37720032 - MIR SINE MIR -22 240 66 307 232 95 37 chr18 48957516 48957706 -37719842 - L1M4 LINE L1 -3191 3191 2991 * 408 252 52 43 chr18 48957703 48957933 -37719615 - L1M4 LINE L1 -3884 2500 2269 1670 243 56 2 chr18 48958115 48958510 -37719038 - LTR16A LTR ERVL 0 450 35 2164 99 28 0 chr18 48958690 48958972 -37718576 - AluSx SINE Alu -22 290 1 591 253 73 7 chr18 48959685 48959835 -37717713 - MER96 DNA MER1_type? -15 160 1 2271 116 0 0 chr18 48960161 48960454 -37717094 + AluSx SINE Alu 1 293 -19 272 267 114 45 chr18 48960456 48960632 -37716916 - MIR SINE MIR -2 260 73 190 292 0 0 chr18 48960646 48960694 -37716854 + L2 LINE L2 3186 3233 -39 1200 158 49 19 chr18 48961938 48962195 -37715353 + MER33 DNA MER1_type 1 253 -71 563 159 53 18 chr18 48962205 48962318 -37715230 - L1MD2 LINE L1 -22 6337 6221 1758 189 0 0 chr18 48962321 48962606 -37714942 + AluJo SINE Alu 3 287 -25 676 132 27 15 chr18 48962610 48962746 -37714802 - L1MD1 LINE L1 -91 7717 6078 454 96 0 14 chr18 48962748 48962821 -37714727 + MER33 DNA MER1_type 244 315 -9 1851 223 101 46 chr18 48962843 48963368 -37714180 - MLT2B3 LTR ERVL 0 554 1 2608 14 0 3 chr18 48963765 48964054 -37713494 - AluYb8 SINE Alu -30 288 1 312 226 161 0 chr18 48964367 48964460 -37713088 + MER45A DNA AcHobo 70 177 -1 2262 212 91 23 chr18 48964695 48965004 -37712544 - L1ME3A LINE L1 -5 6165 5878 2651 201 64 12 chr18 48965004 48965596 -37711952 + MLT1E3 LTR MaLR 1 623 -1 2262 212 91 23 chr18 48965596 48965848 -37711700 - L1ME3A LINE L1 -292 5878 5566 311 292 98 61 chr18 48967779 48968056 -37709492 - L2 LINE L2 -35 3237 2951 236 305 34 25 chr18 48968158 48968276 -37709272 - L2 LINE L2 -560 2754 2636 599 209 54 0 chr18 48969165 48969294 -37708254 - MER58B DNA MER1_type -9 332 197 377 218 238 31 chr18 48969679 48969872 -37707676 - MLT1L LTR MaLR 0 615 383 236 130 22 0 chr18 48969907 48969953 -37707595 + G-rich Low_complexity Low_complexity 5 51 0 285 261 153 9 chr18 48970022 48970133 -37707415 - MLT1L LTR MaLR -415 200 74 326 23 23 0 chr18 48970366 48970409 -37707139 + (TC)n Simple_repeat Simple_repeat 2 45 0 313 231 91 59 chr18 48970610 48970800 -37706748 + MIR SINE MIR 19 221 -41 336 345 65 12 chr18 48971110 48971278 -37706270 + MIR3 SINE MIR 17 193 -15 588 304 4 68 chr18 48971834 48972097 -37705451 - MLT1J LTR MaLR 0 511 266 3580 81 16 10 chr18 48972110 48972594 -37704954 - LTR15 LTR ERV1 -6 487 1 455 260 147 2 chr18 48972594 48972771 -37704777 - MLT1J LTR MaLR -249 262 20 517 226 31 19 chr18 48973011 48973170 -37704378 - L1ME3A LINE L1 0 6170 6010 293 346 9 0 chr18 48973324 48973431 -37704117 + MIR SINE MIR 7 114 -148 304 320 3 0 chr18 48973587 48973707 -37703841 - MIR SINE MIR -65 143 31 825 246 43 1 chr18 48974528 48974766 -37702782 - MIR SINE MIR -1 261 16 455 269 8 15 chr18 48975141 48975275 -37702273 + MIR SINE MIR 12 144 -118 2294 84 0 7 chr18 48975672 48975969 -37701579 + AluY SINE Alu 1 295 -16 937 245 67 69 chr18 48975969 48976345 -37701203 - MLT1J LTR MaLR -11 500 126 1777 132 59 48 chr18 48977961 48978332 -37699216 + THE1C LTR MaLR 1 375 0 1816 202 176 46 chr18 48978352 48978518 -37699030 + L1MC4 LINE L1 5175 4824 -1322 2178 103 13 3 chr18 48978518 48978818 -37698730 + AluSg SINE Alu 1 303 -7 1816 202 176 46 chr18 48978818 48979486 -37698062 + L1MC4 LINE L1 4823 5403 -743 1025 220 65 100 chr18 48979553 48980013 -37697535 + L1M4 LINE L1 3864 4307 -1839 3048 88 37 11 chr18 48980013 48980446 -37697102 - MLT2A1 LTR ERVL 0 444 1 20340 59 23 1 chr18 48980446 48983617 -37693931 - HERVL-A1 LTR ERVL 0 5654 2351 6783 59 0 25 chr18 48983625 48983933 -37693615 - HERVL LTR ERVL -4817 837 523 2273 123 0 0 chr18 48983933 48984235 -37693313 + AluSg SINE Alu 1 302 -8 6783 59 0 25 chr18 48984235 48984784 -37692764 - HERVL LTR ERVL -5131 523 1 3086 81 18 46 chr18 48984784 48985241 -37692307 - MLT2A1 LTR ERVL 0 444 1 245 208 14 14 chr18 48985242 48985314 -37692234 + L1M4 LINE L1 4304 4375 -1771 1692 181 3 0 chr18 48985327 48985614 -37691934 + AluJo SINE Alu 12 299 -13 3961 124 105 130 chr18 48985651 48986083 -37691465 + L1MC3 LINE L1 6679 7120 -665 280 311 11 0 chr18 48986083 48986173 -37691375 + MLT1F1 LTR MaLR 35 125 -442 3961 124 105 130 chr18 48986173 48986299 -37691249 + L1MC3 LINE L1 7120 7248 -537 2340 98 3 7 chr18 48986299 48986606 -37690942 - AluSq SINE Alu -7 306 1 1483 194 124 8 chr18 48986608 48986963 -37690585 - MSTD LTR MaLR 0 396 1 3961 124 105 130 chr18 48986963 48987445 -37690103 + L1MC3 LINE L1 7249 7784 -1 2694 227 101 20 chr18 48987440 48988073 -37689475 + L1M4 LINE L1 4374 5109 -1037 * 2222 110 20 0 chr18 48988073 48988373 -37689175 + AluSg SINE Alu 1 306 -4 2694 227 101 20 chr18 48988373 48988681 -37688867 + L1M4 LINE L1 5109 5391 -755 1569 148 3 77 chr18 48988777 48988819 -37688729 - MLT2D LTR ERVL 0 414 370 396 0 0 0 chr18 48988819 48988863 -37688685 + (TG)n Simple_repeat Simple_repeat 2 45 0 1569 148 3 77 chr18 48988863 48989118 -37688430 - MLT2D LTR ERVL -44 370 139 221 314 90 58 chr18 48989952 48990108 -37687440 - MIR SINE MIR -70 192 32 446 325 98 26 chr18 48990206 48990440 -37687108 - MIR SINE MIR -6 256 6 204 204 37 0 chr18 48990856 48990910 -37686638 + (TTA)n Simple_repeat Simple_repeat 1 56 0 41 72 0 0 chr18 48990957 48991040 -37686508 + AT_rich Low_complexity Low_complexity 1 83 0 227 411 65 17 chr18 48991172 48991310 -37686238 + L2 LINE L2 2968 3123 -149 460 131 0 48 chr18 48991310 48991394 -37686154 - MADE1 DNA Mariner 0 80 1 227 411 65 17 chr18 48991394 48991486 -37686062 + L2 LINE L2 3123 3209 -63 283 286 41 10 chr18 48991504 48991602 -37685946 + LTR67 LTR ERVL 99 199 -358 299 220 70 10 chr18 48991788 48991888 -37685660 + LTR67 LTR ERVL 439 544 -13 359 311 25 8 chr18 48992139 48992261 -37685287 + MIR3 SINE MIR 35 158 -50 1731 165 42 23 chr18 48992487 48992829 -37684719 + MLT1A1 LTR MaLR 4 494 -11 2243 196 56 12 chr18 48993256 48993755 -37683793 + MER74A LTR ERVL 26 546 -12 235 143 0 0 chr18 48993824 48993859 -37683689 + MIR SINE MIR 117 151 -111 1931 151 24 38 chr18 48993948 48994318 -37683230 + MLT1A1 LTR MaLR 1 365 0 352 240 165 39 chr18 48994436 48994715 -37682833 + L1ME4a LINE L1 5803 6116 -5 889 113 13 7 chr18 48995173 48995323 -37682225 + (TTTC)n Simple_repeat Simple_repeat 3 153 0 254 104 0 42 chr18 48995324 48995372 -37682176 + (TTCCC)n Simple_repeat Simple_repeat 3 48 0 843 107 16 0 chr18 48995376 48995497 -37682051 - AluSg/x SINE Alu 0 310 188 714 278 21 16 chr18 48995932 48996123 -37681425 - MER91A DNA MER1_type -1 195 4 678 233 41 17 chr18 48996147 48996319 -37681229 - MIR SINE MIR -70 192 17 542 290 184 31 chr18 48997417 48997803 -37679745 - L2 LINE L2 -2 3311 2867 1084 287 182 32 chr18 48997867 48998638 -37678910 - L2 LINE L2 -629 2685 1800 220 319 48 62 chr18 48998715 48998988 -37678560 + L3 LINE CR1 1247 1515 -62 196 269 19 0 chr18 48999302 48999354 -37678194 - MIR3 SINE MIR -47 161 109 274 234 47 93 chr18 48999537 48999644 -37677904 - MIR SINE MIR -80 182 81 1883 135 3 74 chr18 49000306 49000631 -37676917 - AluJb SINE Alu -10 302 1 226 247 140 0 chr18 49000667 49000760 -37676788 - L1M4 LINE L1 -1049 5097 4992 4133 148 30 23 chr18 49000883 49001368 -37676180 - L1MC1 LINE L1 -5 6328 5835 2413 101 0 0 chr18 49001368 49001674 -37675874 - AluSq SINE Alu -7 306 1 4133 148 30 23 chr18 49001674 49001960 -37675588 - L1MC1 LINE L1 -498 5835 5552 601 174 26 9 chr18 49001960 49002103 -37675445 + MSTA LTR MaLR 12 159 -205 320 306 20 7 chr18 49002267 49002414 -37675134 + L1 LINE L1 4685 4833 -1313 423 260 67 0 chr18 49002901 49003005 -37674543 - MER5B DNA MER1_type -62 116 6 273 312 0 32 chr18 49004870 49005014 -37672534 + GA-rich Low_complexity Low_complexity 1 139 0 2088 124 7 3 chr18 49005210 49005682 -37671866 - AluSx SINE Alu 0 312 12 306 295 162 20 chr18 49007463 49007809 -37669739 + HAL1 LINE L1 2 396 -2111 1087 157 37 28 chr18 49008138 49008355 -37669193 - MER20 DNA MER1_type 0 219 1 219 69 0 0 chr18 49008466 49008495 -37669053 + (CAAAA)n Simple_repeat Simple_repeat 4 32 0 1956 153 0 0 chr18 49008823 49009104 -37668444 + AluJb SINE Alu 1 281 -31 249 108 0 0 chr18 49009104 49009141 -37668407 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 2366 112 0 0 chr18 49009197 49009500 -37668048 + AluSq SINE Alu 1 303 -10 209 291 110 24 chr18 49009569 49009696 -37667852 + MIR3 SINE MIR 39 176 -32 198 103 0 0 chr18 49010052 49010081 -37667467 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 2081 113 0 4 chr18 49010248 49010523 -37667025 + AluSx SINE Alu 1 274 -38 701 107 18 0 chr18 49010525 49010637 -37666911 + (GGAA)n Simple_repeat Simple_repeat 3 116 0 402 268 114 16 chr18 49010640 49010763 -37666785 - MIR SINE MIR -110 152 18 249 349 99 16 chr18 49013123 49013375 -37664173 - L2 LINE L2 -77 3195 2923 316 292 130 19 chr18 49013601 49013755 -37663793 + MER5A DNA MER1_type 1 171 -18 * 340 238 127 24 chr18 49013631 49013757 -37663791 - MER5A DNA MER1_type -19 170 32 683 198 30 6 chr18 49013810 49013977 -37663571 + MER20 DNA MER1_type 45 215 -4 345 261 15 97 chr18 49013981 49014019 -37663529 + L2 LINE L2 3191 3231 -82 2373 99 0 3 chr18 49014019 49014331 -37663217 - AluY SINE Alu 0 311 1 345 261 15 97 chr18 49014331 49014426 -37663122 + L2 LINE L2 3231 3313 0 280 276 52 43 chr18 49015208 49015324 -37662224 - L2 LINE L2 -19 3253 3137 527 231 39 128 chr18 49015752 49015928 -37661620 + MER112 DNA MER1_type 1 191 -69 2250 106 0 0 chr18 49015928 49016260 -37661288 + AluSg SINE Alu 2 333 0 527 231 39 128 chr18 49016260 49016280 -37661268 + MER112 DNA MER1_type 191 211 -49 2367 124 23 3 chr18 49016280 49016666 -37660882 + L1MB3 LINE L1 5789 6182 -1 527 231 39 128 chr18 49016666 49016748 -37660800 + MER112 DNA MER1_type 211 256 -4 288 287 120 43 chr18 49016751 49017169 -37660379 - L2 LINE L2 -1109 2205 1756 338 217 140 16 chr18 49018686 49018843 -37658705 + MIR SINE MIR 17 139 -69 513 303 39 6 chr18 49018862 49019040 -37658508 + Charlie8 DNA MER1_type 1 184 -2233 1342 156 45 0 chr18 49019804 49020047 -37657501 - MER67C LTR ERV1 -66 644 391 781 229 0 29 chr18 49020048 49020218 -37657330 - FRAM SINE Alu -1 165 1 960 215 129 16 chr18 49020222 49020478 -37657070 - AluSg1 SINE Alu 0 309 25 348 226 129 11 chr18 49020715 49020808 -37656740 - MIR SINE MIR -109 153 50 197 324 80 70 chr18 49021966 49022253 -37655295 - L2 LINE L2 -408 2906 2617 2224 95 18 0 chr18 49022851 49023134 -37654414 - AluSc SINE Alu -17 292 5 460 255 111 26 chr18 49023281 49023434 -37654114 + MIR SINE MIR 20 185 -77 2171 106 7 7 chr18 49023534 49023827 -37653721 - AluSq SINE Alu -20 293 1 235 352 0 0 chr18 49023960 49024031 -37653517 + L2 LINE L2 3201 3271 -1 1570 83 5 0 chr18 49024338 49024530 -37653018 + AluSp SINE Alu 100 292 -21 572 218 8 23 chr18 49025574 49025707 -37651841 - MIR SINE MIR -35 227 97 468 0 0 0 chr18 49025735 49025787 -37651761 + (TCTA)n Simple_repeat Simple_repeat 3 54 0 740 161 8 8 chr18 49025987 49026105 -37651443 + FLAM_C SINE Alu 2 119 -24 2493 58 0 23 chr18 49026267 49026577 -37650971 + AluSg SINE Alu 2 304 -6 306 0 0 0 chr18 49027554 49027588 -37649960 + (T)n Simple_repeat Simple_repeat 1 34 0 205 271 42 0 chr18 49027693 49027741 -37649807 - L2 LINE L2 -16 3256 3207 2065 113 23 23 chr18 49028059 49028368 -37649180 + AluSg1 SINE Alu 1 309 0 574 234 130 21 chr18 49029007 49029199 -37648349 - MIR SINE MIR -30 232 20 1735 182 47 6 chr18 49029487 49029850 -37647698 + MLT1E1 LTR MaLR 277 654 0 186 343 29 0 chr18 49029856 49029926 -37647622 - MIR SINE MIR -115 147 76 222 264 82 82 chr18 49030333 49030492 -37647056 - L3 LINE CR1 -7 1570 1412 1712 195 7 3 chr18 49030911 49031214 -37646334 - AluSp SINE Alu -9 304 1 227 221 13 65 chr18 49031257 49031334 -37646214 + MLT1J LTR MaLR 229 301 -210 1069 269 7 7 chr18 49031523 49031824 -37645724 + AluYa5 SINE Alu 1 301 0 399 283 157 0 chr18 49031826 49032017 -37645531 - L1MEc LINE L1 -2940 3275 3055 2644 224 47 40 chr18 49032019 49032919 -37644629 - L1MEc LINE L1 -3220 2995 2134 186 43 0 0 chr18 49032951 49032974 -37644574 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 180 0 0 0 chr18 49033210 49033230 -37644318 + (C)n Simple_repeat Simple_repeat 1 20 0 758 196 0 15 chr18 49033279 49033412 -37644136 - FLAM_C SINE Alu -1 132 2 1649 288 64 55 chr18 49033412 49034522 -37643026 - L1MEc LINE L1 -5240 1156 37 638 283 62 52 chr18 49034547 49035028 -37642520 - L1MC5 LINE L1 -476 7485 7000 1048 141 15 73 chr18 49035199 49035405 -37642143 - AluY SINE Alu -117 194 1 487 349 42 13 chr18 49035457 49036203 -37641345 + L1M4 LINE L1 3788 4554 -1592 254 321 0 14 chr18 49036463 49036603 -37640945 + AluYb8 SINE Alu 171 308 0 * 672 232 77 47 chr18 49036602 49036835 -37640713 + MLT1I LTR MaLR 170 409 0 192 343 0 0 chr18 49036835 49036902 -37640646 - L2 LINE L2 -1075 2239 2173 199 280 149 56 chr18 49036908 49037015 -37640533 + L2 LINE L2 3136 3252 -20 1322 248 3 3 chr18 49037094 49037404 -37640144 - AluYa5 SINE Alu -1 310 1 45 0 0 0 chr18 49037548 49037593 -37639955 + AT_rich Low_complexity Low_complexity 1 45 0 23 0 0 0 chr18 49038215 49038238 -37639310 + AT_rich Low_complexity Low_complexity 1 23 0 323 91 0 0 chr18 49038332 49038376 -37639172 + (G)n Simple_repeat Simple_repeat 1 44 0 40 38 0 38 chr18 49038685 49038765 -37638783 + AT_rich Low_complexity Low_complexity 1 77 0 2420 211 28 94 chr18 49091159 49091944 -37585604 - L1M4 LINE L1 -1714 4432 3708 2054 92 39 0 chr18 49091944 49092226 -37585322 - AluSp SINE Alu -20 293 1 2420 211 28 94 chr18 49092226 49092365 -37585183 - L1M4 LINE L1 -2438 3708 3561 2056 129 7 13 chr18 49092365 49092668 -37584880 - AluSq SINE Alu -12 301 1 1326 197 10 36 chr18 49092672 49092976 -37584572 - AluJo SINE Alu -16 296 1 2112 116 7 0 chr18 49092985 49093279 -37584269 - AluSx SINE Alu -16 296 1 695 158 10 0 chr18 49093279 49093380 -37584168 - AluSq/x SINE Alu -177 135 34 1452 180 71 4 chr18 49093608 49093875 -37583673 + AluJb SINE Alu 1 285 -27 471 322 73 41 chr18 49093887 49094204 -37583344 + L2 LINE L2 2850 3176 -137 1512 159 4 4 chr18 49094353 49094604 -37582944 - AluSg SINE Alu -16 294 44 422 221 87 19 chr18 49095739 49095843 -37581705 + MER5B DNA MER1_type 6 116 -62 345 322 20 0 chr18 49096330 49096476 -37581072 - L1 LINE L1 -1313 4833 4685 2852 200 34 4 chr18 49096751 49097285 -37580263 - MER44D DNA MER2_type 0 605 1 207 0 0 0 chr18 49097541 49097564 -37579984 + (CAAT)n Simple_repeat Simple_repeat 4 26 0 1327 194 24 30 chr18 49097742 49098072 -37579476 - L1MA4 LINE L1 0 6300 5973 6730 196 23 1 chr18 49098076 49099481 -37578067 - L1 LINE L1 -2131 4015 2581 2893 3 0 0 chr18 49099605 49099912 -37577636 - AluYb8 SINE Alu -11 307 1 183 178 260 41 chr18 49100063 49100136 -37577412 - MIR SINE MIR -118 144 56 313 226 161 0 chr18 49100225 49100318 -37577230 + MER45A DNA AcHobo 70 177 -1 2284 212 91 23 chr18 49100553 49100862 -37576686 - L1ME3A LINE L1 -5 6165 5878 2852 198 64 12 chr18 49100862 49101454 -37576094 + MLT1E3 LTR MaLR 1 623 -1 2284 212 91 23 chr18 49101454 49101706 -37575842 - L1ME3A LINE L1 -292 5878 5566 210 296 104 24 chr18 49102863 49102988 -37574560 - L3b LINE CR1 -242 1341 1207 395 292 98 61 chr18 49103637 49103914 -37573634 - L2 LINE L2 -35 3237 2951 269 305 34 25 chr18 49104016 49104134 -37573414 - L2 LINE L2 -560 2754 2636 599 209 54 0 chr18 49105023 49105152 -37572396 - MER58B DNA MER1_type -9 332 197 377 218 238 31 chr18 49105537 49105730 -37571818 - MLT1L LTR MaLR 0 615 383 236 130 22 0 chr18 49105765 49105811 -37571737 + G-rich Low_complexity Low_complexity 5 51 0 281 261 153 9 chr18 49105880 49105991 -37571557 - MLT1L LTR MaLR -415 200 74 326 23 23 0 chr18 49106224 49106267 -37571281 + (TC)n Simple_repeat Simple_repeat 2 45 0 352 232 93 57 chr18 49106461 49106658 -37570890 + MIR SINE MIR 11 221 -41 386 345 65 12 chr18 49106968 49107136 -37570412 + MIR3 SINE MIR 17 193 -15 594 304 4 68 chr18 49107692 49107955 -37569593 - MLT1J LTR MaLR 0 511 266 3586 81 16 10 chr18 49107968 49108452 -37569096 - LTR15 LTR ERV1 -6 487 1 453 260 147 2 chr18 49108452 49108629 -37568919 - MLT1J LTR MaLR -249 262 20 525 226 31 19 chr18 49108869 49109028 -37568520 - L1ME3A LINE L1 0 6170 6010 313 330 8 17 chr18 49109182 49109300 -37568248 + MIR SINE MIR 7 123 -139 330 311 11 0 chr18 49109445 49109565 -37567983 - MIR SINE MIR -65 143 31 890 246 43 1 chr18 49110386 49110624 -37566924 - MIR SINE MIR -1 261 16 541 294 39 43 chr18 49110996 49111251 -37566297 + MIR SINE MIR 8 261 -1 2431 61 0 3 chr18 49111530 49111826 -37565722 + AluY SINE Alu 1 295 -16 1046 242 58 71 chr18 49111826 49112206 -37565342 - MLT1J LTR MaLR -11 500 126 418 274 48 24 chr18 49113873 49113997 -37563551 + MIR SINE MIR 21 147 -61 416 187 13 0 chr18 49114336 49114411 -37563137 - L2 LINE L2 -5 3308 3233 275 279 210 23 chr18 49114410 49114629 -37562919 + L2 LINE L2 3005 3264 -8 * 2430 141 7 73 chr18 49114632 49115028 -37562520 + MLT2D LTR ERVL 5 371 -43 396 0 0 0 chr18 49115028 49115072 -37562476 + (CA)n Simple_repeat Simple_repeat 2 45 0 2430 141 7 73 chr18 49115072 49115114 -37562434 + MLT2D LTR ERVL 371 414 0 2769 226 101 20 chr18 49115210 49115518 -37562030 - L1M4 LINE L1 -755 5391 5109 2820 7 0 7 chr18 49115518 49115827 -37561721 - AluYa5 SINE Alu -4 307 1 2769 226 101 20 chr18 49115827 49116460 -37561088 - L1M4 LINE L1 -1037 5109 4374 * 3999 124 105 130 chr18 49116455 49116937 -37560611 - L1MC3 LINE L1 -1 7784 7292 1608 197 124 8 chr18 49116937 49117292 -37560256 + MSTD LTR MaLR 1 396 0 2323 98 3 7 chr18 49117294 49117601 -37559947 + AluSq SINE Alu 1 306 -7 3999 124 105 130 chr18 49117601 49117727 -37559821 - L1MC3 LINE L1 -494 7291 7163 282 311 11 0 chr18 49117727 49117817 -37559731 - MLT1F1 LTR MaLR -442 125 35 3999 124 105 130 chr18 49117817 49118249 -37559299 - L1MC3 LINE L1 -622 7163 6679 1689 181 3 0 chr18 49118286 49118573 -37558975 - AluJo SINE Alu -13 299 12 255 208 14 14 chr18 49118586 49118658 -37558890 - L1M4 LINE L1 -1771 4375 4304 3255 81 18 46 chr18 49118659 49119116 -37558432 + MLT2A1 LTR ERVL 1 444 0 6774 59 0 25 chr18 49119116 49119665 -37557883 + HERVL-A1 LTR ERVL 1 523 -5131 2259 123 0 0 chr18 49119665 49119967 -37557581 - AluSg SINE Alu -8 302 1 6774 59 0 25 chr18 49119967 49120275 -37557273 + HERVL-A1 LTR ERVL 523 837 -4817 20301 59 22 1 chr18 49120283 49123455 -37554093 + HERVL-A1 LTR ERVL 2351 5654 0 3214 88 37 11 chr18 49123455 49123888 -37553660 + MLT2A1 LTR ERVL 1 444 0 1052 220 65 100 chr18 49123888 49124348 -37553200 - L1M4 LINE L1 -1839 4307 3864 1895 216 166 50 chr18 49124415 49125083 -37552465 - L1MC4 LINE L1 -743 5403 4814 2161 103 13 3 chr18 49125083 49125383 -37552165 - AluSg SINE Alu -7 303 1 1895 216 166 50 chr18 49125383 49125569 -37551979 - L1MC4 LINE L1 -1332 4814 4651 1905 132 59 48 chr18 49125569 49125940 -37551608 - THE1C LTR MaLR 0 375 1 1895 216 166 50 chr18 49125940 49125968 -37551580 - L1MC4 LINE L1 -1495 4651 5104 2170 102 3 33 chr18 49125968 49126272 -37551276 - AluSq SINE Alu -18 295 1 1895 216 166 50 chr18 49126272 49126401 -37551147 - L1MC4 LINE L1 -1041 5105 4992 4397 149 30 23 chr18 49126524 49127009 -37550539 - L1MC1 LINE L1 -5 6328 5835 2369 101 0 0 chr18 49127009 49127315 -37550233 - AluSq SINE Alu -7 306 1 4397 149 30 23 chr18 49127315 49127601 -37549947 - L1MC1 LINE L1 -498 5835 5552 628 174 26 9 chr18 49127601 49127744 -37549804 + MSTA LTR MaLR 12 159 -205 352 306 20 7 chr18 49127908 49128055 -37549493 + L1 LINE L1 4685 4833 -1313 422 221 87 19 chr18 49128542 49128646 -37548902 - MER5B DNA MER1_type -62 116 6 1798 119 4 4 chr18 49129781 49130033 -37547515 + AluSg SINE Alu 44 295 -15 283 222 19 0 chr18 49130087 49130141 -37547407 + MER69 DNA AcHobo 62 116 -2410 717 184 279 32 chr18 49130162 49130273 -37547275 + MER69B DNA AcHobo 658 740 -1786 2757 82 10 79 chr18 49130273 49130678 -37546870 + MER51B LTR ERV1 1 377 0 717 184 279 32 chr18 49130678 49130882 -37546666 + MER69B DNA AcHobo 740 1051 -175 2132 206 151 30 chr18 49130888 49131361 -37546187 + MER77 LTR ERV1 1 548 -57 1990 140 0 3 chr18 49131361 49131654 -37545894 - AluSx SINE Alu -20 292 1 2132 206 151 30 chr18 49131654 49131718 -37545830 + MER77 LTR ERV1 548 603 -2 389 227 55 43 chr18 49131720 49131883 -37545665 + MER69B DNA AcHobo 1062 1226 0 423 214 95 59 chr18 49132176 49132356 -37545192 + MIR SINE MIR 15 192 -67 656 283 136 7 chr18 49132387 49132612 -37544936 + MIR SINE MIR 13 260 -2 688 221 47 29 chr18 49133298 49133470 -37544078 - MER5B DNA MER1_type -3 175 1 758 249 50 32 chr18 49134326 49134547 -37543001 - MIR SINE MIR -21 241 17 400 253 10 20 chr18 49135032 49135131 -37542417 + MER5B DNA MER1_type 3 100 -78 338 205 128 4 chr18 49135137 49135254 -37542294 + MER5A DNA MER1_type 9 181 -8 511 193 19 154 chr18 49135254 49135449 -37542099 - MER5A DNA MER1_type 0 189 1 325 292 53 9 chr18 49135543 49135656 -37541892 - L2 LINE L2 -23 3290 3173 1118 277 108 22 chr18 49135802 49136264 -37541284 + MLT1J LTR MaLR 1 502 -9 626 283 50 32 chr18 49136270 49136489 -37541059 - L2 LINE L2 -283 3030 2808 349 211 231 19 chr18 49136740 49136897 -37540651 - L1ME LINE L1 -536 5634 5445 269 70 47 0 chr18 49136896 49136939 -37540609 + L1MB2 LINE L1 6099 6143 -28 * 1637 129 103 4 chr18 49137093 49137356 -37540192 + AluSx SINE Alu 1 289 -23 22 0 0 0 chr18 49137356 49137378 -37540170 + AT_rich Low_complexity Low_complexity 1 22 0 232 269 13 0 chr18 49137404 49137482 -37540066 - L1ME LINE L1 -872 5274 5196 1726 155 26 0 chr18 49137509 49137780 -37539768 - AluJb SINE Alu -24 288 11 309 208 287 0 chr18 49137806 49137907 -37539641 + L1M4 LINE L1 3880 4009 -2137 28 0 0 0 chr18 49137946 49137974 -37539574 + AT_rich Low_complexity Low_complexity 1 28 0 264 320 57 6 chr18 49138009 49138184 -37539364 - L1ME LINE L1 -2303 3843 3660 459 156 91 0 chr18 49138184 49138261 -37539287 - AluJ/FLAM SINE Alu -227 85 2 434 282 141 9 chr18 49138287 49138500 -37539048 - L1ME LINE L1 -3765 2381 2141 * 2182 187 116 3 chr18 49138498 49139064 -37538484 + L1MCb LINE L1 1102 1729 -4835 * 4182 194 54 46 chr18 49139059 49139773 -37537775 + L1MB8 LINE L1 4111 4818 -1360 2103 119 0 28 chr18 49139773 49140091 -37537457 - AluSx SINE Alu -3 309 1 4182 194 54 46 chr18 49140091 49140600 -37536948 + L1MB8 LINE L1 4818 5321 -857 1510 147 41 94 chr18 49140600 49140920 -37536628 + AluJb SINE Alu 1 303 -9 4182 194 54 46 chr18 49140920 49141708 -37535840 + L1MB8 LINE L1 5321 6155 -23 353 272 22 0 chr18 49141734 49141826 -37535722 - L1MC4 LINE L1 -1335 6707 6614 313 267 47 0 chr18 49141776 49141862 -37535686 + L1MC4 LINE L1 6614 6703 -1339 * 1556 174 16 91 chr18 49141871 49142245 -37535303 + MLT1B LTR MaLR 35 380 -10 280 254 0 16 chr18 49142273 49142399 -37535149 + (TA)n Simple_repeat Simple_repeat 1 124 0 302 209 179 0 chr18 49142493 49142560 -37534988 - L2 LINE L2 -48 3265 3187 198 333 124 9 chr18 49142719 49142824 -37534724 - L2 LINE L2 -1336 1978 1862 183 301 30 101 chr18 49143202 49143401 -37534147 + L2 LINE L2 1523 1707 -1607 1944 120 7 0 chr18 49143423 49143698 -37533850 + AluSx SINE Alu 2 278 -34 456 19 0 0 chr18 49143810 49143863 -37533685 + (A)n Simple_repeat Simple_repeat 1 53 0 305 136 261 0 chr18 49143963 49144051 -37533497 + HsTC2 DNA Tc2 1788 1898 0 301 286 127 0 chr18 49144104 49144230 -37533318 + L2 LINE L2 1957 2098 -1216 603 265 160 22 chr18 49144871 49145139 -37532409 - L2 LINE L2 0 3313 3009 404 224 28 37 chr18 49145122 49145229 -37532319 + MIR SINE MIR 48 153 -109 * 229 261 43 29 chr18 49145562 49145631 -37531917 + L2 LINE L2 3238 3307 -6 429 349 145 15 chr18 49146055 49146456 -37531092 - L2 LINE L2 -2550 764 312 378 286 149 6 chr18 49146953 49147114 -37530434 + MIR SINE MIR 46 229 -33 207 0 0 0 chr18 49147114 49147137 -37530411 + (T)n Simple_repeat Simple_repeat 1 23 0 1666 246 56 2 chr18 49147527 49147922 -37529626 - LTR16A LTR ERVL 0 450 35 2039 99 28 0 chr18 49148102 49148384 -37529164 - AluSx SINE Alu -22 290 1 602 280 67 0 chr18 49149097 49149247 -37528301 - MER96 DNA MER1_type? -15 160 1 2151 116 0 0 chr18 49149573 49149867 -37527681 + AluSx SINE Alu 1 294 -18 372 269 114 40 chr18 49149868 49150043 -37527505 - MIR SINE MIR -2 260 73 236 221 279 0 chr18 49150057 49150125 -37527423 + L2 LINE L2 3186 3272 0 1191 158 49 19 chr18 49151350 49151607 -37525941 + MER33 DNA MER1_type 1 253 -71 560 159 53 18 chr18 49151617 49151730 -37525818 - L1MD2 LINE L1 -22 6337 6221 1652 189 0 0 chr18 49151733 49152018 -37525530 + AluJo SINE Alu 3 287 -25 664 132 27 15 chr18 49152022 49152158 -37525390 - L1MD1 LINE L1 -91 7717 6078 446 96 0 14 chr18 49152160 49152233 -37525315 + MER33 DNA MER1_type 244 315 -9 1859 223 101 46 chr18 49152255 49152780 -37524768 - MLT2B3 LTR ERVL 0 554 1 183 244 70 105 chr18 49153368 49153454 -37524094 - MIR SINE MIR -57 151 69 1917 121 23 10 chr18 49153845 49154150 -37523398 + AluSg1 SINE Alu 1 309 0 573 234 130 21 chr18 49154793 49154985 -37522563 - MIR SINE MIR -30 232 20 2156 87 18 0 chr18 49155132 49155418 -37522130 + AluSc SINE Alu 5 295 -14 215 296 19 0 chr18 49155427 49155481 -37522067 + MIR3 SINE MIR 133 187 -21 346 226 129 11 chr18 49157452 49157545 -37520003 + MIR SINE MIR 50 153 -109 834 215 129 16 chr18 49157782 49158038 -37519510 + AluSg1 SINE Alu 25 309 0 755 229 0 29 chr18 49158042 49158212 -37519336 + FRAM SINE Alu 1 165 -1 1430 152 45 0 chr18 49158213 49158456 -37519092 + MER67C LTR ERV1 391 644 -66 547 303 39 6 chr18 49159221 49159399 -37518149 - Charlie8 DNA MER1_type -2233 184 1 327 217 140 16 chr18 49159418 49159575 -37517973 - MIR SINE MIR -69 139 17 2341 68 0 22 chr18 49161572 49161883 -37515665 - AluSg SINE Alu -6 304 1 198 0 0 0 chr18 49162091 49162113 -37515435 + (A)n Simple_repeat Simple_repeat 1 22 0 1495 163 29 49 chr18 49162123 49162430 -37515118 + AluJo SINE Alu 1 301 -11 1550 142 55 11 chr18 49162434 49162708 -37514840 + AluSx SINE Alu 1 286 -26 1690 249 86 80 chr18 49162726 49163524 -37514024 + HAL1 LINE L1 1529 2336 -171 2261 82 3 0 chr18 49163524 49163818 -37513730 + AluSp SINE Alu 2 296 -17 1690 249 86 80 chr18 49163818 49163992 -37513556 + HAL1 LINE L1 2336 2507 0 688 306 73 71 chr18 49164419 49164960 -37512588 - L2 LINE L2 -420 2894 2350 1573 195 23 0 chr18 49164960 49165262 -37512286 + AluJb SINE Alu 1 309 -3 688 306 73 71 chr18 49165262 49165311 -37512237 - L2 LINE L2 -964 2350 2303 1649 147 29 7 chr18 49165314 49165587 -37511961 + AluJb SINE Alu 6 284 -28 279 0 0 0 chr18 49165587 49165618 -37511930 + (CA)n Simple_repeat Simple_repeat 2 32 0 2174 102 0 10 chr18 49165779 49166092 -37511456 + AluSp SINE Alu 1 310 -3 1898 142 0 3 chr18 49166095 49166390 -37511158 + AluSx SINE Alu 1 294 -18 292 333 23 16 chr18 49166454 49166583 -37510965 - MER5A DNA MER1_type -34 155 26 237 329 60 78 chr18 49166590 49166757 -37510791 - L2 LINE L2 -1465 1849 1686 597 239 8 8 chr18 49166767 49166897 -37510651 + MER5B DNA MER1_type 3 132 -46 410 277 90 64 chr18 49167034 49167223 -37510325 - MIR3 SINE MIR -41 167 21 324 337 153 27 chr18 49168346 49168711 -37508837 + L2 LINE L2 1580 1990 -1324 263 269 192 32 chr18 49168718 49168937 -37508611 - MIR SINE MIR 0 262 9 789 193 34 6 chr18 49169259 49169435 -37508113 - LTR37B LTR ERV1 0 468 288 348 287 104 0 chr18 49169437 49169552 -37507996 + MER2 DNA MER2_type 6 132 -213 1125 103 0 7 chr18 49169552 49169730 -37507818 - AluSg/x SINE Alu 0 305 129 2044 124 0 13 chr18 49169742 49170057 -37507491 - AluSx SINE Alu -1 311 1 586 217 185 11 chr18 49170059 49170248 -37507300 + MER2 DNA MER2_type 123 344 -1 674 140 0 0 chr18 49170250 49170357 -37507191 - LTR37B LTR ERV1 -178 290 184 1568 278 104 55 chr18 49170378 49170709 -37506839 + L1MEc LINE L1 34 347 -6049 4073 80 34 0 chr18 49170709 49171245 -37506303 - MER41A LTR ERV1 0 554 1 1568 278 104 55 chr18 49171245 49171867 -37505681 + L1MEc LINE L1 347 1051 -5345 2008 95 3 25 chr18 49171867 49172171 -37505377 - AluSc SINE Alu 0 298 1 1568 278 104 55 chr18 49172171 49172307 -37505241 + L1MEc LINE L1 1051 1179 -5217 1180 176 235 32 chr18 49172345 49172719 -37504829 + LTR10A LTR ERV1 99 548 -61 189 0 0 0 chr18 49172967 49172988 -37504560 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 1619 141 0 50 chr18 49173141 49173438 -37504110 - AluSx SINE Alu -4 308 27 1456 169 14 14 chr18 49173460 49173739 -37503809 - AluJo SINE Alu -8 304 26 498 298 80 5 chr18 49174306 49174494 -37503054 + MIR SINE MIR 10 211 -51 191 321 38 0 chr18 49174975 49175028 -37502520 + MIR SINE MIR 206 260 -2 1995 119 23 3 chr18 49175143 49175446 -37502102 - AluSc SINE Alu 0 309 1 270 279 109 79 chr18 49175454 49175683 -37501865 - L2 LINE L2 -2 3311 3076 * 436 337 143 7 chr18 49175673 49175967 -37501581 - L2 LINE L2 -452 2862 2529 326 270 122 9 chr18 49175973 49176088 -37501460 - L1MC4 LINE L1 -1 8041 7914 630 231 57 77 chr18 49176275 49176397 -37501151 - L1ME3A LINE L1 -289 5881 5802 1670 160 42 0 chr18 49176397 49176684 -37500864 - AluJb SINE Alu -13 299 1 630 231 57 77 chr18 49176684 49176826 -37500722 - L1ME3A LINE L1 -368 5802 5659 1705 85 32 167 chr18 49176962 49177363 -37500185 - L1MC3 LINE L1 -149 7636 7290 610 206 47 0 chr18 49177379 49177486 -37500062 - REP3 LTR ERV -315 247 136 2131 105 3 10 chr18 49177532 49177836 -37499712 - AluSq SINE Alu -11 302 1 832 255 85 59 chr18 49177836 49177932 -37499616 - L1MEd LINE L1 -3174 3041 2949 708 200 0 0 chr18 49177932 49178047 -37499501 - FLAM_A SINE Alu -18 115 1 832 255 85 59 chr18 49178047 49178491 -37499057 - L1MEd LINE L1 -3266 2949 2487 2112 109 0 10 chr18 49178574 49178868 -37498680 - AluSg SINE Alu -17 293 3 582 170 0 0 chr18 49178925 49179019 -37498529 + FLAM_A SINE Alu 8 101 -41 305 325 81 0 chr18 49179225 49179348 -37498200 - L1MEd LINE L1 -5083 1122 990 7690 24 0 10 chr18 49179537 49180865 -37496683 + L1PA4 LINE L1 4833 6152 -3 2164 109 7 0 chr18 49181446 49181750 -37495798 + AluSx SINE Alu 1 306 -6 312 291 12 35 chr18 49181751 49181837 -37495711 - L1M4 LINE L1 -2467 3679 3596 1107 204 31 31 chr18 49181995 49182284 -37495264 + AluJb SINE Alu 1 289 -13 480 185 0 0 chr18 49182637 49182745 -37494803 + (CA)n Simple_repeat Simple_repeat 2 109 0 1733 151 0 0 chr18 49183079 49183377 -37494171 + AluSp SINE Alu 3 300 -13 432 0 0 0 chr18 49184190 49184238 -37493310 + (CA)n Simple_repeat Simple_repeat 2 49 0 3744 201 33 28 chr18 49184296 49185147 -37492401 + HSMAR2 DNA Mariner 447 1301 -1 250 225 0 28 chr18 49187295 49187366 -37490182 + (CGG)n Simple_repeat Simple_repeat 1 69 0 701 191 43 43 chr18 49187924 49188112 -37489436 + AluJb SINE Alu 2 189 -123 597 300 67 0 chr18 49188122 49188302 -37489246 + HERV3 LTR ERV1 7144 7335 -1091 3099 203 3 2 chr18 49188307 49188889 -37488659 + HERV3 LTR ERV1 7229 7811 -2 183 42 0 0 chr18 49188918 49188942 -37488606 + (CCCCCA)n Simple_repeat Simple_repeat 5 28 0 1765 192 47 42 chr18 49188978 49189385 -37488163 + LTR2 LTR ERV1 41 449 0 274 209 0 66 chr18 49189385 49189476 -37488072 - L1MEd LINE L1 -5679 717 633 302 338 136 28 chr18 49189665 49189781 -37487767 - L1MEd LINE L1 -6008 388 286 1726 122 52 17 chr18 49189781 49190068 -37487480 - AluSq SINE Alu -16 297 1 302 338 136 28 chr18 49190068 49190268 -37487280 - L1MEd LINE L1 -6110 286 38 1995 127 0 3 chr18 49190348 49190640 -37486908 + AluSx SINE Alu 1 291 -21 257 163 0 0 chr18 49191676 49191719 -37485829 - Ricksha DNA DNA -1137 909 867 204 315 0 0 chr18 49191720 49191774 -37485774 + (CATA)n Simple_repeat Simple_repeat 2 55 0 1017 233 29 103 chr18 49191850 49192227 -37485321 - MLT2B1 LTR ERVL -35 485 137 1023 76 0 28 chr18 49192227 49192362 -37485186 + AluSc SINE Alu 1 133 -176 2426 72 3 0 chr18 49192362 49192669 -37484879 + AluSp SINE Alu 1 308 -5 202 322 48 27 chr18 49193794 49193907 -37483641 - MER5A DNA MER1_type -1 177 70 342 286 264 17 chr18 49194508 49194686 -37482862 - MIR SINE MIR -21 241 20 785 203 42 0 chr18 49195835 49195978 -37481570 + FRAM SINE Alu 1 149 -27 472 153 0 0 chr18 49196812 49196884 -37480664 + AluS SINE Alu 2 73 -240 2055 174 21 0 chr18 49197274 49197607 -37479941 - MER2 DNA MER2_type -3 341 2 2215 105 0 16 chr18 49197717 49198032 -37479516 - AluSq SINE Alu -3 310 1 2272 112 0 0 chr18 49198280 49198585 -37478963 + AluSx SINE Alu 1 305 -7 26 0 0 0 chr18 49198625 49198651 -37478897 + AT_rich Low_complexity Low_complexity 1 26 0 629 274 185 12 chr18 49198671 49198996 -37478552 - HAL1 LINE L1 -586 1921 1541 319 240 58 35 chr18 49199104 49199275 -37478273 - HAL1 LINE L1 -1353 1154 980 1967 98 47 7 chr18 49199612 49199911 -37477637 - AluSq SINE Alu 0 310 1 464 200 95 9 chr18 49199962 49200067 -37477481 + MER46C DNA MER2_type 68 181 -157 528 270 95 71 chr18 49200068 49200248 -37477300 - L1ME LINE L1 -521 5641 5467 1686 160 46 7 chr18 49200248 49200529 -37477019 + AluJb SINE Alu 1 292 -20 528 270 95 71 chr18 49200529 49200769 -37476779 - L1ME LINE L1 -695 5467 5234 2155 133 0 0 chr18 49200769 49201069 -37476479 - AluSx SINE Alu -12 300 1 528 270 95 71 chr18 49201069 49201397 -37476151 - L1ME LINE L1 -928 5234 4877 818 113 9 0 chr18 49201522 49201637 -37475911 + AluJb SINE Alu 2 117 -195 23 0 0 0 chr18 49201644 49201667 -37475881 + AT_rich Low_complexity Low_complexity 1 23 0 803 197 119 33 chr18 49201670 49201914 -37475634 - L1ME3A LINE L1 -5 6165 5901 1245 188 9 27 chr18 49201916 49202140 -37475408 + MER8 DNA MER2_type 1 220 -19 280 184 82 0 chr18 49202259 49202357 -37475191 - L1ME3A LINE L1 -264 5906 5801 * 991 225 108 13 chr18 49202324 49202641 -37474907 - L1ME3A LINE L1 -596 5566 5218 1995 263 140 42 chr18 49202952 49204908 -37472640 - L1ME3A LINE L1 -1471 4675 2459 722 124 0 10 chr18 49204927 49205024 -37472524 + AluJo/FLAM SINE Alu 22 117 -195 2298 89 0 13 chr18 49205025 49205327 -37472221 - AluSx SINE Alu -14 298 1 5616 201 30 43 chr18 49205491 49207213 -37470335 - L1MD1 LINE L1 -2 6240 4497 2279 110 0 10 chr18 49207213 49207521 -37470027 - AluSp SINE Alu -8 305 1 5616 201 30 43 chr18 49207521 49208378 -37469170 - L1MD1 LINE L1 -1745 4497 3700 2054 92 39 0 chr18 49208378 49208660 -37468888 - AluSp SINE Alu -20 293 1 5616 201 30 43 chr18 49208660 49208799 -37468749 - L1MD1 LINE L1 -2542 3700 3561 2056 129 7 13 chr18 49208799 49209102 -37468446 - AluSq SINE Alu -12 301 1 1319 191 13 40 chr18 49209106 49209410 -37468138 - AluJo SINE Alu -16 296 1 2112 116 7 0 chr18 49209419 49209713 -37467835 - AluSx SINE Alu -16 296 1 695 158 10 0 chr18 49209713 49209814 -37467734 - AluSq/x SINE Alu -178 135 34 1452 180 71 4 chr18 49210042 49210309 -37467239 + AluJb SINE Alu 1 285 -27 471 322 73 41 chr18 49210321 49210638 -37466910 + L2 LINE L2 2850 3176 -137 316 266 150 50 chr18 49210680 49210787 -37466761 - L1M4 LINE L1 -1549 4597 4502 2193 111 0 3 chr18 49210787 49211084 -37466464 - AluSx SINE Alu -16 296 1 316 266 150 50 chr18 49211084 49211353 -37466195 - L1M4 LINE L1 -1644 4502 4261 1803 128 50 7 chr18 49211353 49211634 -37465914 + AluSx SINE Alu 2 294 -18 316 266 150 50 chr18 49211634 49211646 -37465902 - L1M4 LINE L1 -1885 4261 4252 1495 195 62 0 chr18 49211646 49211918 -37465630 + AluJb SINE Alu 6 294 -18 316 266 150 50 chr18 49211918 49212182 -37465366 - L1M4 LINE L1 -1894 4252 3878 1032 178 22 120 chr18 49212204 49212563 -37464985 - L1MC4 LINE L1 -929 7045 6709 439 143 67 28 chr18 49212589 49212700 -37464848 - L1MC3 LINE L1 -2 7982 6223 358 256 83 8 chr18 49212763 49212884 -37464664 - L1MC5 LINE L1 -102 7859 7730 222 91 0 0 chr18 49213613 49213646 -37463902 + (T)n Simple_repeat Simple_repeat 1 33 0 2030 131 0 0 chr18 49214118 49214409 -37463139 - AluSx SINE Alu -21 291 1 2309 99 0 7 chr18 49214706 49215009 -37462539 - AluSq SINE Alu -12 301 1 21 0 0 0 chr18 49215096 49215117 -37462431 + AT_rich Low_complexity Low_complexity 1 21 0 2107 133 3 0 chr18 49215653 49215953 -37461595 - AluSx SINE Alu -11 301 1 274 267 70 0 chr18 49215983 49216069 -37461479 - MIR SINE MIR -64 144 53 1057 174 82 52 chr18 49216772 49217001 -37460547 + MER33 DNA MER1_type 11 254 -2331 1515 199 18 7 chr18 49217001 49217307 -37460241 - AluJo SINE Alu 0 309 1 1057 174 82 52 chr18 49217307 49217381 -37460167 + MER33 DNA MER1_type 254 324 0 2188 178 13 5 chr18 49219429 49219816 -37457732 - L1MB3 LINE L1 -9 6174 5785 341 149 30 0 chr18 49219867 49219934 -37457614 - HAL1 LINE L1 -105 2402 2334 2722 171 44 9 chr18 49219944 49220892 -37456656 - L1MB3 LINE L1 -387 5784 4811 2040 133 32 41 chr18 49220895 49221233 -37456315 + MER1B DNA MER1_type 5 339 0 2572 194 32 68 chr18 49221234 49221945 -37455603 - L1MB3 LINE L1 -1334 4812 4127 200 213 0 0 chr18 49222523 49222570 -37454978 + T-rich Low_complexity Low_complexity 1 47 0 380 280 107 7 chr18 49222649 49222799 -37454749 - L1ME LINE L1 -442 5679 5515 23 0 0 0 chr18 49222880 49222903 -37454645 + AT_rich Low_complexity Low_complexity 1 23 0 1896 136 3 26 chr18 49222934 49223242 -37454306 - AluSx SINE Alu -11 301 1 28 29 0 0 chr18 49223444 49223479 -37454069 + AT_rich Low_complexity Low_complexity 1 35 0 540 17 0 0 chr18 49224102 49224161 -37453387 - AluY SINE Alu -18 291 233 2015 128 0 13 chr18 49224257 49224555 -37452993 - AluSg SINE Alu -8 302 9 2344 82 7 13 chr18 49224862 49225165 -37452383 - AluSp SINE Alu -11 302 2 2404 81 3 3 chr18 49225188 49225498 -37452050 + AluY SINE Alu 1 310 -1 1410 174 47 40 chr18 49225786 49225949 -37451599 - AluJo SINE Alu -11 301 134 1483 190 27 14 chr18 49225949 49226244 -37451304 - AluJo SINE Alu -13 299 1 1410 174 47 40 chr18 49226244 49226378 -37451170 - AluJo SINE Alu -178 134 2 1635 91 0 26 chr18 49226678 49226910 -37450638 - AluSg/x SINE Alu -6 306 81 212 212 91 45 chr18 49226951 49227017 -37450531 + MER91C DNA MER1_type 48 116 -24 542 253 61 72 chr18 49227198 49227475 -37450073 - L1MC/D LINE L1 -2091 5717 5444 25 65 0 0 chr18 49227589 49227635 -37449913 + AT_rich Low_complexity Low_complexity 1 46 0 2245 93 0 0 chr18 49227703 49227981 -37449567 - AluSg SINE Alu -30 280 3 1013 169 0 6 chr18 49229190 49229356 -37448192 - FAM SINE Alu -12 173 9 1435 162 56 15 chr18 49229389 49229682 -37447866 - AluJo SINE Alu 0 308 5 4397 160 51 45 chr18 49229702 49230606 -37446942 - L1MB3 LINE L1 0 6183 5275 2077 124 3 3 chr18 49230906 49231213 -37446335 - AluSx SINE Alu -5 307 1 224 319 90 42 chr18 49231515 49231681 -37445867 - MIR SINE MIR -42 220 47 241 260 55 0 chr18 49231854 49231927 -37445621 - MLT1G LTR MaLR 0 590 514 3734 115 10 59 chr18 49231927 49232502 -37445046 - LTR10B LTR ERV1 0 547 1 30931 213 19 22 chr18 49232518 49232800 -37444748 - HERVI LTR ERV1 -16 7769 7488 2436 73 0 13 chr18 49232800 49233102 -37444446 + AluY SINE Alu 1 298 -13 30931 213 19 22 chr18 49233102 49239160 -37438388 - HERVI LTR ERV1 -297 7488 1449 666 147 0 9 chr18 49239284 49239393 -37438155 - AluSq/x SINE Alu -203 109 2 396 260 114 16 chr18 49240027 49240150 -37437398 + MIR SINE MIR 18 152 -110 701 107 18 0 chr18 49240153 49240265 -37437283 + (TTCC)n Simple_repeat Simple_repeat 3 116 0 2054 113 0 4 chr18 49240267 49240542 -37437006 - AluSx SINE Alu -38 274 1 198 103 0 0 chr18 49240707 49240736 -37436812 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 200 190 130 50 chr18 49241119 49241219 -37436329 - MIR SINE MIR -62 146 39 2351 106 0 0 chr18 49241289 49241590 -37435958 - AluSq SINE Alu -12 301 1 249 108 0 0 chr18 49241646 49241683 -37435865 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 1876 154 4 0 chr18 49241683 49241963 -37435585 - AluJb SINE Alu -31 281 1 219 69 0 0 chr18 49242291 49242320 -37435228 + (TTTTG)n Simple_repeat Simple_repeat 4 32 0 239 228 54 65 chr18 49242327 49242419 -37435129 - HAL1 LINE L1 -1629 878 788 1117 157 37 28 chr18 49242431 49242648 -37434900 + MER20 DNA MER1_type 1 219 0 338 292 162 20 chr18 49242977 49243323 -37434225 - HAL1 LINE L1 -2111 396 2 2123 119 7 0 chr18 49245094 49245562 -37431986 + AluSx SINE Alu 1 470 0 273 312 0 32 chr18 49245772 49245916 -37431632 + CT-rich Low_complexity Low_complexity 1 139 0 2227 108 7 7 chr18 49246878 49247185 -37430363 - AluSq SINE Alu -6 307 1 243 309 0 0 chr18 49247318 49247373 -37430175 + L2 LINE L2 3201 3255 -17 2494 75 0 3 chr18 49247728 49248036 -37429512 - AluY SINE Alu -4 307 1 2736 225 64 40 chr18 49248036 49249595 -37427953 - HERVI LTR ERV1 -5961 688 5 3812 94 10 70 chr18 49249595 49250177 -37427371 - LTR10B LTR ERV1 0 547 1 1356 285 60 31 chr18 49250201 49250688 -37426860 - MLT1G1 LTR MaLR -90 505 5 506 263 170 32 chr18 49251677 49252256 -37425292 - L1M4c LINE L1 -4486 2077 1276 1902 118 0 0 chr18 49252855 49253110 -37424438 - AluSx SINE Alu -57 255 1 2260 107 7 0 chr18 49253583 49253881 -37423667 - AluSp SINE Alu -13 300 1 1617 179 104 14 chr18 49254258 49254604 -37422944 - MLT1B LTR MaLR -13 377 1 1529 124 128 12 chr18 49254778 49255036 -37422512 + AluJb SINE Alu 1 288 -24 449 318 8 8 chr18 49255087 49255219 -37422329 + MER94 DNA DNA 2 133 -1 21 0 0 0 chr18 49255343 49255364 -37422184 + AT_rich Low_complexity Low_complexity 1 21 0 2200 100 3 3 chr18 49255364 49255654 -37421894 + AluSq SINE Alu 1 290 -23 282 193 0 0 chr18 49255654 49255711 -37421837 + (TA)n Simple_repeat Simple_repeat 1 57 0 258 152 0 0 chr18 49255712 49255758 -37421790 - LTR66 LTR ERVL -172 438 393 2085 116 3 14 chr18 49256025 49256319 -37421229 - AluSx SINE Alu -20 292 2 2940 216 76 76 chr18 49256327 49257112 -37420436 - L1MC4a LINE L1 0 7808 7024 1756 100 154 8 chr18 49257112 49257372 -37420176 - AluSg1 SINE Alu -11 298 1 1515 213 0 3 chr18 49257372 49257658 -37419890 - AluJb SINE Alu -10 302 18 2940 216 76 76 chr18 49257658 49257964 -37419584 - L1MC4a LINE L1 -782 7026 6716 801 238 30 0 chr18 49258076 49258244 -37419304 + MER5B DNA MER1_type 4 176 -2 372 260 96 0 chr18 49258681 49258785 -37418763 - L2 LINE L2 0 3313 3200 1480 201 0 10 chr18 49258914 49259223 -37418325 - AluY SINE Alu -5 306 1 292 289 112 26 chr18 49259293 49259445 -37418103 + MIR SINE MIR 23 187 -75 1513 179 59 4 chr18 49259666 49259939 -37417609 - AluJo SINE Alu -24 288 1 560 258 0 49 chr18 49261282 49261445 -37416103 - MIR SINE MIR -29 233 79 477 297 169 0 chr18 49261651 49261799 -37415749 - MER5A DNA MER1_type -6 183 11 241 341 37 0 chr18 49261944 49262026 -37415522 + MER5B DNA MER1_type 1 85 -93 2449 56 20 3 chr18 49262071 49262374 -37415174 + AluY SINE Alu 1 308 -3 25 0 0 0 chr18 49262526 49262551 -37414997 + GC_rich Low_complexity Low_complexity 1 25 0 312 70 0 0 chr18 49262572 49262615 -37414933 + (A)n Simple_repeat Simple_repeat 1 43 0 493 216 81 135 chr18 49263297 49263473 -37414075 + L1MC5 LINE L1 6638 6877 -1165 740 222 0 15 chr18 49263473 49263608 -37413940 - FLAM_A SINE Alu 0 133 1 493 216 81 135 chr18 49263608 49263691 -37413857 + L1MC5 LINE L1 6877 6963 -1079 22 0 0 0 chr18 49264006 49264028 -37413520 + AT_rich Low_complexity Low_complexity 1 22 0 2055 112 4 0 chr18 49264806 49265084 -37412464 - AluSg SINE Alu -31 279 1 1640 177 0 38 chr18 49265282 49265599 -37411949 - AluJb SINE Alu -7 305 1 461 243 183 50 chr18 49267562 49267863 -37409685 + L1MC5 LINE L1 6885 7225 -736 318 304 41 35 chr18 49267878 49268049 -37409499 + L1MC4 LINE L1 7324 7495 -547 389 236 104 28 chr18 49268319 49268501 -37409047 + L1MC5 LINE L1 7716 7911 -50 324 192 128 56 chr18 49268768 49268893 -37408655 + L1MC5 LINE L1 7811 7944 -17 207 0 0 0 chr18 49269804 49269827 -37407721 + (CA)n Simple_repeat Simple_repeat 1 23 0 1357 266 101 24 chr18 49270072 49270579 -37406969 + HsTC2a DNA Tc2 6 551 -193 231 214 143 0 chr18 49270578 49270648 -37406900 + HsTC2a DNA Tc2 663 742 0 * 23 33 0 0 chr18 49270687 49270717 -37406831 + AT_rich Low_complexity Low_complexity 1 30 0 2442 70 0 3 chr18 49270812 49271111 -37406437 + AluY SINE Alu 1 298 -13 25 0 0 0 chr18 49274426 49274451 -37403097 + AT_rich Low_complexity Low_complexity 1 25 0 345 326 129 6 chr18 49275385 49275558 -37401990 - MIR3 SINE MIR -62 146 1 242 224 15 15 chr18 49275949 49276016 -37401532 - MER116 DNA Mariner -1 79 13 241 250 0 0 chr18 49276299 49276367 -37401181 + T-rich Low_complexity Low_complexity 1 68 0 234 0 0 0 chr18 49276714 49276740 -37400808 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 234 345 99 16 chr18 49278207 49278459 -37399089 - L2 LINE L2 -77 3195 2923 291 292 130 19 chr18 49278685 49278839 -37398709 + MER5A DNA MER1_type 1 171 -18 * 322 238 127 24 chr18 49278715 49278841 -37398707 - MER5A DNA MER1_type -19 170 32 771 180 124 16 chr18 49278867 49279061 -37398487 + MER20 DNA MER1_type 1 215 -4 327 261 15 97 chr18 49279065 49279103 -37398445 + L2 LINE L2 3191 3231 -82 2331 99 0 3 chr18 49279103 49279415 -37398133 - AluY SINE Alu 0 311 1 327 261 15 97 chr18 49279415 49279510 -37398038 + L2 LINE L2 3231 3313 0 250 225 50 38 chr18 49280328 49280408 -37397140 - L2 LINE L2 -55 3217 3137 591 230 39 134 chr18 49280836 49281012 -37396536 + MER112 DNA MER1_type 1 192 -68 2220 106 0 0 chr18 49281012 49281344 -37396204 + AluSg SINE Alu 2 333 0 591 230 39 134 chr18 49281344 49281364 -37396184 + MER112 DNA MER1_type 192 212 -48 2507 122 23 3 chr18 49281364 49281748 -37395800 + L1MB3 LINE L1 5789 6180 -3 591 230 39 134 chr18 49281748 49281832 -37395716 + MER112 DNA MER1_type 212 256 -4 219 285 124 48 chr18 49281835 49282253 -37395295 - L2 LINE L2 -1109 2205 1756 1401 170 72 30 chr18 49282605 49282940 -37394608 - MLT1A1 LTR MaLR -2 363 15 301 326 25 14 chr18 49283026 49283308 -37394240 - L1M4 LINE L1 -1767 4615 4306 3971 176 70 16 chr18 49283322 49284132 -37393416 - L1MB8 LINE L1 0 6178 5325 2132 122 31 0 chr18 49284132 49284426 -37393122 - AluSq SINE Alu -10 303 1 36411 71 6 8 chr18 49284471 49290088 -37387460 - L1PA6 LINE L1 0 6154 550 1477 197 60 17 chr18 49290089 49290440 -37387108 - L1MB8 LINE L1 -814 5332 4967 2040 119 3 35 chr18 49290557 49290888 -37386660 - AluSx SINE Alu 0 312 1 958 255 154 52 chr18 49290900 49291781 -37385767 - L1M4 LINE L1 -2204 4178 3208 722 241 35 6 chr18 49291826 49291996 -37385552 - MIR SINE MIR -22 240 66 320 236 112 22 chr18 49291996 49292174 -37385374 - L1M4 LINE L1 -3191 3191 2998 358 266 84 26 chr18 49292182 49292408 -37385140 - L1M4 LINE L1 -3884 2500 2262 24 0 0 0 chr18 49292620 49292644 -37384904 + AT_rich Low_complexity Low_complexity 1 24 0 1840 166 10 16 chr18 49292662 49292975 -37384573 - AluJb SINE Alu -1 311 1 848 265 12 29 chr18 49294428 49294673 -37382875 + Charlie1 DNA MER1_type 1 241 -2520 499 148 82 67 chr18 49294654 49294735 -37382813 + Charlie1 DNA MER1_type 2622 2700 -61 * 2227 128 0 0 chr18 49294735 49295041 -37382507 - AluSg SINE Alu -4 306 1 2179 84 45 0 chr18 49295041 49295327 -37382221 - AluSq SINE Alu -14 299 1 499 148 82 67 chr18 49295327 49295379 -37382169 + Charlie1 DNA MER1_type 2699 2758 -3 21 36 0 0 chr18 49295415 49295443 -37382105 + AT_rich Low_complexity Low_complexity 1 28 0 190 256 73 80 chr18 49296109 49296246 -37381302 + MIR SINE MIR 79 214 -48 670 237 58 66 chr18 49296456 49296713 -37380835 + MIR SINE MIR 2 256 -6 350 313 86 8 chr18 49296974 49297102 -37380446 - L2 LINE L2 -10 3262 3125 1037 313 125 12 chr18 49297437 49298021 -37379527 + L1MC4a LINE L1 5267 5916 -1892 246 293 27 13 chr18 49298937 49299012 -37378536 - MIR SINE MIR -176 86 11 640 220 8 8 chr18 49299331 49299463 -37378085 + FLAM_A SINE Alu 1 132 -1 593 189 0 72 chr18 49299566 49299719 -37377829 - L1MC4 LINE L1 -3 8039 7898 246 216 68 14 chr18 49299770 49299844 -37377704 - L1MC4 LINE L1 -144 7898 7821 328 321 117 12 chr18 49299861 49300023 -37377525 - L1ME LINE L1 -382 5739 5561 838 222 0 0 chr18 49300147 49300309 -37377239 + FRAM SINE Alu 4 165 -11 231 274 151 14 chr18 49300796 49300869 -37376679 - L2 LINE L2 -4 3268 3186 416 258 32 0 chr18 49301399 49301415 -37376133 - L1MA10 LINE L1 -39 6295 6280 2926 229 60 29 chr18 49301415 49302012 -37375536 - L1ME2 LINE L1 -49 6115 5538 2121 123 0 3 chr18 49302012 49302313 -37375235 - AluSx SINE Alu -12 300 1 2926 229 60 29 chr18 49302313 49302474 -37375074 - L1ME2 LINE L1 -626 5538 5384 2250 85 0 3 chr18 49302474 49302787 -37374761 - AluSg SINE Alu 0 312 1 2926 229 60 29 chr18 49302787 49303325 -37374223 - L1ME2 LINE L1 -780 5384 4767 1645 224 120 6 chr18 49303330 49303871 -37373677 - L1ME2 LINE L1 -1412 4734 4132 605 232 177 20 chr18 49303871 49304244 -37373304 - L1ME2 LINE L1 -2273 3873 3429 246 188 291 42 chr18 49304269 49304630 -37372918 - L1ME2 LINE L1 -2963 3183 2733 455 346 71 12 chr18 49307259 49307499 -37370049 + MIR SINE MIR 3 256 -6 680 222 83 56 chr18 49307772 49308024 -37369524 - L1MB8 LINE L1 0 6178 5920 594 300 150 52 chr18 49308320 49308800 -37368748 + L3 LINE CR1 377 903 -674 393 326 103 44 chr18 49308830 49309149 -37368399 + L1M4 LINE L1 3622 3959 -2187 369 332 135 33 chr18 49309206 49309540 -37368008 + L3 LINE CR1 982 1349 -228 1649 144 43 52 chr18 49309900 49310205 -37367343 - AluJb SINE Alu -10 302 1 1399 217 14 0 chr18 49311682 49311968 -37365580 - AluJo SINE Alu -22 290 1 2776 149 74 27 chr18 49314477 49315002 -37362546 - MER44D DNA MER2_type 0 605 1 28 0 0 0 chr18 49316358 49316386 -37361162 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr18 49316813 49316839 -37360709 + AT_rich Low_complexity Low_complexity 1 26 0 1534 166 64 34 chr18 49318156 49318452 -37359096 + AluJo SINE Alu 1 305 -7 24 0 0 0 chr18 49322567 49322591 -37354957 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr18 49323643 49323672 -37353876 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18 49324791 49324812 -37352736 + AT_rich Low_complexity Low_complexity 1 21 0 2379 73 3 3 chr18 49325150 49325452 -37352096 - AluSp SINE Alu -11 302 1 2031 134 3 7 chr18 49326090 49326395 -37351153 - AluSx SINE Alu -8 304 1 2239 90 7 10 chr18 49326579 49326880 -37350668 + AluSc SINE Alu 4 303 -6 371 239 67 15 chr18 49326901 49327035 -37350513 - L1M4 LINE L1 -2900 3246 3106 392 200 11 0 chr18 49327036 49327126 -37350422 + CT-rich Low_complexity Low_complexity 1 91 0 2006 134 7 3 chr18 49327126 49327418 -37350130 - AluSx SINE Alu -19 293 1 25 51 0 0 chr18 49327418 49327457 -37350091 + AT_rich Low_complexity Low_complexity 1 39 0 1273 120 0 11 chr18 49327457 49327640 -37349908 - AluSg/x SINE Alu -1 311 131 342 0 0 0 chr18 49327646 49327684 -37349864 + (TTA)n Simple_repeat Simple_repeat 2 39 0 2054 111 11 7 chr18 49327687 49327967 -37349581 - AluSg SINE Alu -29 281 1 1962 126 32 0 chr18 49327969 49328254 -37349294 - AluSx SINE Alu -18 294 1 1784 220 50 44 chr18 49328650 49328716 -37348832 + L1ME2 LINE L1 5529 5593 -571 2088 136 3 0 chr18 49328716 49329018 -37348530 + AluSq SINE Alu 3 305 -8 1784 220 50 44 chr18 49329018 49329245 -37348303 + L1ME2 LINE L1 5593 5817 -347 2196 134 0 0 chr18 49329245 49329552 -37347996 + AluSx SINE Alu 1 307 -5 1784 220 50 44 chr18 49329552 49329692 -37347856 + L1ME2 LINE L1 5817 5969 -195 2154 107 3 10 chr18 49329692 49329992 -37347556 + AluSg SINE Alu 1 298 -12 1784 220 50 44 chr18 49329992 49330078 -37347470 + L1ME2 LINE L1 5969 6053 -111 797 61 0 0 chr18 49330080 49330178 -37347370 + L1P2 LINE L1 1 98 -6048 * 39049 37 4 3 chr18 49330147 49335325 -37342223 + L1P2 LINE L1 580 5762 -393 204 40 0 0 chr18 49335433 49335458 -37342090 + (A)n Simple_repeat Simple_repeat 1 25 0 692 190 22 0 chr18 49335458 49335595 -37341953 - MLT2B1 LTR ERVL -373 147 8 216 300 110 0 chr18 49335605 49335639 -37341909 + MER5A DNA MER1_type 79 108 -81 2161 121 20 0 chr18 49335639 49335944 -37341604 - AluSp SINE Alu -2 311 1 216 300 110 0 chr18 49335944 49336009 -37341539 + MER5A DNA MER1_type 108 189 0 182 331 196 0 chr18 49336243 49336376 -37341172 - L2 LINE L2 -1198 2116 1958 199 292 0 0 chr18 49336714 49336762 -37340786 + L2 LINE L2 3251 3298 -15 257 274 0 0 chr18 49336784 49336835 -37340713 + HAL1 LINE L1 35 85 -2422 2185 154 20 12 chr18 49336854 49337630 -37339918 + AluSp SINE Alu 2 299 -14 2035 118 6 56 chr18 49337752 49338074 -37339474 + AluSx SINE Alu 1 306 -6 2216 113 0 3 chr18 49338077 49338379 -37339169 + AluSc SINE Alu 2 302 -7 222 37 0 0 chr18 49338382 49338409 -37339139 + (GAA)n Simple_repeat Simple_repeat 1 27 0 506 270 137 87 chr18 49338418 49338927 -37338621 + HAL1 LINE L1 261 743 -1764 1252 216 63 17 chr18 49338927 49339214 -37338334 - AluJb SINE Alu -1 301 2 636 200 8 0 chr18 49339218 49339348 -37338200 - FLAM_C SINE Alu -2 131 1 506 270 137 87 chr18 49339348 49339492 -37338056 + HAL1 LINE L1 745 952 -1555 2305 89 0 7 chr18 49339513 49339817 -37337731 + AluSc SINE Alu 2 303 -6 2120 104 3 14 chr18 49339944 49340070 -37337478 + AluSx SINE Alu 10 136 -176 2083 108 3 0 chr18 49340070 49340366 -37337182 + AluSp SINE Alu 1 297 -16 2120 104 3 14 chr18 49340366 49340527 -37337021 + AluSx SINE Alu 136 294 -18 24 32 0 0 chr18 49340527 49340558 -37336990 + AT_rich Low_complexity Low_complexity 1 31 0 2247 110 0 3 chr18 49341983 49342291 -37335257 - AluSg1 SINE Alu -1 308 2 250 267 155 8 chr18 49342318 49342428 -37335120 + MIR SINE MIR 36 166 -93 2022 133 14 0 chr18 49342968 49343262 -37334286 - AluJb SINE Alu -14 298 1 247 95 24 0 chr18 49343295 49343337 -37334211 + HY3 scRNA scRNA 59 101 0 1620 99 126 15 chr18 49343990 49344252 -37333296 - AluSg1 SINE Alu -18 291 1 254 143 20 0 chr18 49344512 49344561 -37332987 + (TG)n Simple_repeat Simple_repeat 1 50 0 1012 169 0 32 chr18 49544800 49544989 -37132559 + AluJo/FRAM SINE Alu 130 312 0 249 333 0 0 chr18 49546301 49546391 -37131157 + L1MC/D LINE L1 5695 5784 -2024 584 216 20 39 chr18 49546539 49546597 -37130951 + MER58B DNA MER1_type 7 65 -276 2083 150 95 32 chr18 49546597 49546998 -37130550 + MSTB LTR MaLR 1 426 0 584 216 20 39 chr18 49546998 49547092 -37130456 + MER58B DNA MER1_type 65 156 -185 22 0 0 0 chr18 49547114 49547136 -37130412 + AT_rich Low_complexity Low_complexity 1 22 0 692 261 25 10 chr18 49547147 49547346 -37130202 + MER58B DNA MER1_type 140 341 0 2234 139 48 94 chr18 49547372 49547934 -37129614 + L1MB7 LINE L1 5649 6184 0 6543 111 17 41 chr18 49547944 49548912 -37128636 - MER11C LTR ERVK 0 1071 131 2384 68 17 0 chr18 49548912 49549207 -37128341 - AluSp SINE Alu -13 300 1 6543 111 17 41 chr18 49549207 49549335 -37128213 - MER11C LTR ERVK -940 131 1 669 325 79 17 chr18 49549357 49549603 -37127945 - L2 LINE L2 -240 3073 2797 1742 145 87 0 chr18 49549603 49549947 -37127601 + L1MA4 LINE L1 5926 6299 -1 669 325 79 17 chr18 49549947 49549993 -37127555 - L2 LINE L2 -516 2797 2755 491 265 18 29 chr18 49550098 49550268 -37127280 - MIR SINE MIR -48 214 47 2054 117 0 33 chr18 49550291 49550598 -37126950 - AluY SINE Alu -14 297 1 238 322 98 55 chr18 49550853 49551251 -37126297 - L2 LINE L2 -453 2861 2447 642 268 40 82 chr18 49551446 49551797 -37125751 + MLT1J LTR MaLR 101 465 -46 1820 170 6 29 chr18 49551797 49552109 -37125439 + AluJo SINE Alu 1 305 -7 2220 103 10 3 chr18 49552112 49552403 -37125145 + AluSq SINE Alu 1 293 -20 642 268 40 82 chr18 49552403 49552476 -37125072 + MLT1J LTR MaLR 467 511 0 1041 192 0 0 chr18 49554250 49554422 -37123126 + FAM SINE Alu 4 175 0 401 320 93 0 chr18 49554462 49554612 -37122936 + L3 LINE CR1 1400 1563 -14 1874 125 29 11 chr18 49554939 49555218 -37122330 + AluSx SINE Alu 1 284 -28 195 42 0 0 chr18 49555417 49555441 -37122107 + (TAA)n Simple_repeat Simple_repeat 2 25 0 259 250 42 0 chr18 49555758 49555830 -37121718 + MIR SINE MIR 48 122 -86 1734 168 6 43 chr18 49556393 49556715 -37120833 - AluJo SINE Alu -2 310 1 375 193 50 6 chr18 49557701 49558045 -37119503 + (TA)n Simple_repeat Simple_repeat 1 359 0 23 0 0 0 chr18 49558045 49558068 -37119480 + AT_rich Low_complexity Low_complexity 1 23 0 458 299 66 40 chr18 49558965 49559239 -37118309 + MARNA DNA Mariner 73 353 -233 498 245 108 14 chr18 49560379 49560518 -37117030 + MER91B DNA MER1_type 34 185 -5 235 284 0 23 chr18 49560518 49560606 -37116942 - MLT1K LTR MaLR -330 258 173 589 167 20 0 chr18 49560906 49561008 -37116540 + MLT1A1 LTR MaLR 1 104 -261 393 299 72 28 chr18 49561291 49561863 -37115685 - L1MEd LINE L1 -890 1600 983 2238 107 0 0 chr18 49561969 49562258 -37115290 - AluSg SINE Alu -21 289 1 1021 55 0 0 chr18 49562691 49562818 -37114730 - AluY SINE Alu -11 300 174 743 172 8 22 chr18 49563272 49563406 -37114142 - FLAM_A SINE Alu -1 132 1 27 49 0 0 chr18 49563466 49563507 -37114041 + AT_rich Low_complexity Low_complexity 1 41 0 227 246 51 133 chr18 49564076 49564271 -37113277 - MLT1K LTR MaLR -22 566 388 359 271 10 10 chr18 49564356 49564452 -37113096 - MIR SINE MIR -11 251 156 792 245 167 0 chr18 49564481 49564750 -37112798 + L2 LINE L2 698 1011 -2303 792 187 13 0 chr18 49564805 49564960 -37112588 - LTR16C LTR ERVL 0 491 335 996 283 161 24 chr18 49565183 49565604 -37111944 + L2 LINE L2 1036 1514 -1800 337 157 8 28 chr18 49565604 49565736 -37111812 - MER106B DNA MER1_type 0 1059 896 599 304 63 30 chr18 49565769 49566039 -37111509 + L2 LINE L2 1509 1787 -1527 297 174 58 0 chr18 49566051 49566120 -37111428 + MLT1A1 LTR MaLR 259 331 -199 190 260 115 0 chr18 49566360 49566456 -37111092 + MIR SINE MIR 146 252 -10 23 54 0 0 chr18 49566790 49566827 -37110721 + AT_rich Low_complexity Low_complexity 1 37 0 180 290 43 14 chr18 49566902 49566971 -37110577 + L2 LINE L2 3242 3312 -1 261 240 120 30 chr18 49567487 49567587 -37109961 + L2 LINE L2 3138 3246 -26 225 0 0 0 chr18 49567610 49567635 -37109913 + (T)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr18 49567834 49567855 -37109693 + (T)n Simple_repeat Simple_repeat 1 21 0 2268 103 0 3 chr18 49569342 49569643 -37107905 - AluSg SINE Alu -9 301 2 14722 132 60 15 chr18 49569782 49572382 -37105166 - Tigger2 DNA MER2_type 0 2718 2 361 238 24 0 chr18 49572586 49572670 -37104878 - MER103 DNA DNA -44 122 37 233 207 58 116 chr18 49572712 49572771 -37104777 - L1ME2 LINE L1 -10 6949 6899 1469 187 62 11 chr18 49572771 49573044 -37104504 - AluJb SINE Alu -25 287 1 233 207 58 116 chr18 49573044 49573105 -37104443 - L1ME2 LINE L1 -60 6899 6836 1603 227 109 43 chr18 49573148 49573649 -37103899 - L1ME2 LINE L1 -109 6850 6278 1653 203 115 57 chr18 49573649 49574126 -37103422 + MLT1D LTR MaLR 1 505 0 1603 227 109 43 chr18 49574126 49574330 -37103218 - L1ME2 LINE L1 -681 6278 6089 720 165 239 5 chr18 49574371 49574559 -37102989 - MER46A DNA MER2_type -4 232 1 1611 160 25 44 chr18 49574566 49574884 -37102664 - AluJo SINE Alu 0 312 1 2177 232 127 24 chr18 49575049 49576100 -37101448 - L1ME2 LINE L1 -1266 5675 4517 449 254 120 14 chr18 49576484 49576626 -37100922 - L1ME2 LINE L1 -5967 456 300 313 303 92 0 chr18 49576670 49576789 -37100759 - L1MCa LINE L1 -5044 1897 1768 230 282 117 21 chr18 49576842 49577030 -37100518 - L1MCa LINE L1 -5080 1864 1659 344 205 36 0 chr18 49577113 49577196 -37100352 - L1MCa LINE L1 -5086 1337 1252 559 282 63 20 chr18 49577815 49578067 -37099481 - L1ME2 LINE L1 -6144 279 17 377 306 104 5 chr18 49579024 49579217 -37098331 + L1MEc LINE L1 1972 2183 -4213 1076 267 162 29 chr18 49579224 49580279 -37097269 + L1MEc LINE L1 2197 3391 -2824 976 187 138 4 chr18 49580370 49580638 -37096910 + MER33 DNA MER1_type 9 312 -12 568 250 139 0 chr18 49580655 49580799 -37096749 - MIR SINE MIR -93 169 6 186 360 13 0 chr18 49581129 49581204 -37096344 + MIR SINE MIR 18 93 -169 196 292 120 95 chr18 49581382 49581707 -37095841 + L2 LINE L2 2256 2588 -726 273 393 24 36 chr18 49581871 49582039 -37095509 + L2 LINE L2 3017 3182 -90 397 279 29 23 chr18 49582447 49582619 -37094929 - L1MC/D LINE L1 -772 5587 5415 277 299 0 48 chr18 49582883 49583030 -37094518 + HAL1 LINE L1 1428 1567 -940 27 0 0 0 chr18 49583061 49583088 -37094460 + AT_rich Low_complexity Low_complexity 1 27 0 2196 128 16 0 chr18 49584381 49584685 -37092863 - AluSx SINE Alu -3 309 1 2335 138 70 20 chr18 49584967 49585422 -37092126 + L1MB8 LINE L1 5693 6170 -8 2164 137 0 0 chr18 49585423 49585722 -37091826 - AluSq SINE Alu -14 299 1 181 394 0 0 chr18 49586221 49586287 -37091261 + MIR SINE MIR 20 85 -123 * 301 271 70 31 chr18 49586274 49586403 -37091145 - L2 LINE L2 0 3272 3139 651 153 51 0 chr18 49586543 49586661 -37090887 - FLAM_C SINE Alu -14 129 6 267 257 28 111 chr18 49586674 49586743 -37090805 + L2 LINE L2 3172 3224 -89 3596 166 27 26 chr18 49586743 49587483 -37090065 - L1MB7 LINE L1 0 6184 5444 267 257 28 111 chr18 49587483 49587557 -37089991 + L2 LINE L2 3224 3303 -10 535 194 13 45 chr18 49588056 49588211 -37089337 + LTR67 LTR ERVL 408 557 0 396 130 0 0 chr18 49588230 49588299 -37089249 + (TG)n Simple_repeat Simple_repeat 1 69 0 915 326 52 33 chr18 49588303 49588944 -37088604 - L2 LINE L2 -213 3059 2412 180 348 169 0 chr18 49588952 49589041 -37088507 - L2 LINE L2 -3 3269 3166 499 227 64 117 chr18 49589727 49590009 -37087539 - L2 LINE L2 0 3313 3047 251 310 78 26 chr18 49590299 49590415 -37087133 + MIR3 SINE MIR 37 158 -50 232 250 0 0 chr18 49591902 49591954 -37085594 - L2 LINE L2 -93 3220 3169 239 93 23 0 chr18 49592131 49592174 -37085374 + (TG)n Simple_repeat Simple_repeat 1 44 0 715 333 32 30 chr18 49592219 49592669 -37084879 - L2 LINE L2 -256 3016 2573 191 337 72 24 chr18 49593848 49593931 -37083617 - MIR SINE MIR -162 100 14 2349 50 7 0 chr18 49597292 49597594 -37079954 - AluSp SINE Alu 0 304 1 256 243 146 48 chr18 49597622 49597725 -37079823 - L2 LINE L2 0 3272 3160 2276 100 0 3 chr18 49600449 49600758 -37076790 + AluSx SINE Alu 1 308 -4 2364 80 3 7 chr18 49600945 49601245 -37076303 - AluSq SINE Alu -14 299 1 854 179 68 6 chr18 49601619 49601781 -37075767 + MER3 DNA MER1_type 38 209 0 471 219 114 80 chr18 49601629 49601830 -37075718 - MER3 DNA MER1_type 0 209 2 * 21 0 0 0 chr18 49602018 49602039 -37075509 + AT_rich Low_complexity Low_complexity 1 21 0 1418 196 105 7 chr18 49602583 49602889 -37074659 + MER2 DNA MER2_type 10 345 0 230 312 83 0 chr18 49603324 49603433 -37074115 + L1ME LINE L1 47 164 -5955 544 267 110 66 chr18 49603942 49604046 -37073502 - L1MC4a LINE L1 -1931 5877 5779 1742 181 0 7 chr18 49604046 49604339 -37073209 - AluJb SINE Alu -21 291 1 544 267 110 66 chr18 49604339 49604507 -37073041 - L1MC4a LINE L1 -2029 5779 5593 796 162 86 14 chr18 49604684 49604907 -37072641 + MER33 DNA MER1_type 1 238 -86 1380 223 29 7 chr18 49604909 49605218 -37072330 + MLT1A1 LTR MaLR 50 365 0 378 145 66 0 chr18 49605224 49605300 -37072248 + MER33 DNA MER1_type 283 363 0 446 258 8 17 chr18 49605568 49605688 -37071860 - HAL1 LINE L1 -627 1880 1762 459 0 0 0 chr18 49605691 49605742 -37071806 + (TG)n Simple_repeat Simple_repeat 2 52 0 551 177 10 0 chr18 49605743 49605839 -37071709 - FRAM SINE Alu -19 157 61 3082 254 140 38 chr18 49605849 49607359 -37070189 - HAL1 LINE L1 -766 1741 78 762 154 41 0 chr18 49607359 49607482 -37070066 + FLAM_C SINE Alu 1 128 -5 739 108 0 0 chr18 49608079 49608190 -37069358 + AluSg/x SINE Alu 189 299 -13 356 292 96 32 chr18 49608218 49608468 -37069080 + L1ME LINE L1 3169 3434 -2695 1584 128 56 0 chr18 49608542 49608805 -37068743 + AluSx SINE Alu 35 310 0 581 310 25 0 chr18 49609078 49609281 -37068267 + L1ME LINE L1 3769 3976 -2153 854 194 68 15 chr18 49609292 49609498 -37068050 + L1ME2 LINE L1 5888 6104 -60 319 145 26 66 chr18 49609582 49609658 -37067890 - MER112 DNA MER1_type -181 79 7 302 279 86 0 chr18 49609698 49609838 -37067710 + L1ME LINE L1 5661 5812 -341 294 246 100 8 chr18 49610255 49610385 -37067163 + L1M4 LINE L1 4496 4637 -1509 214 239 289 14 chr18 49610729 49610871 -37066677 + MIR SINE MIR 81 261 -1 2169 103